Citrus Sinensis ID: 002984
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 861 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LRA7 | 867 | Probable alpha,alpha-treh | yes | no | 0.997 | 0.990 | 0.789 | 0.0 | |
| O80738 | 861 | Probable alpha,alpha-treh | no | no | 0.997 | 0.997 | 0.769 | 0.0 | |
| Q0WUI9 | 856 | Probable alpha,alpha-treh | no | no | 0.991 | 0.997 | 0.775 | 0.0 | |
| O23617 | 862 | Alpha,alpha-trehalose-pho | no | no | 0.980 | 0.979 | 0.657 | 0.0 | |
| Q94AH8 | 860 | Alpha,alpha-trehalose-pho | no | no | 0.972 | 0.973 | 0.645 | 0.0 | |
| Q9LMI0 | 851 | Probable alpha,alpha-treh | no | no | 0.972 | 0.983 | 0.634 | 0.0 | |
| Q9ZV48 | 862 | Probable alpha,alpha-treh | no | no | 0.938 | 0.937 | 0.630 | 0.0 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | no | 0.833 | 0.979 | 0.349 | 1e-140 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | no | 0.885 | 0.927 | 0.350 | 1e-126 | |
| Q54NU9 | 790 | Alpha,alpha-trehalose-pho | no | no | 0.753 | 0.821 | 0.337 | 1e-123 |
| >sp|Q9LRA7|TPS9_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 OS=Arabidopsis thaliana GN=TPS9 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1436 bits (3717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/865 (78%), Positives = 763/865 (88%), Gaps = 6/865 (0%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGSRER 60
M SRSCANFLDLAS LLD PQT R LPRVMTVPGIIS+ DG S+ +S+ SRER
Sbjct: 1 MVSRSCANFLDLASWDLLDFPQTQRALPRVMTVPGIISELDGGYSDGSSDVNSSNSSRER 60
Query: 61 KIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQE 120
KIIVANMLPL AKRDTETG+WCFS DED LLL L+DGFSSDTE +Y+GSL ADI SEQE
Sbjct: 61 KIIVANMLPLQAKRDTETGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGISEQE 120
Query: 121 EVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAY 180
EV+ KLL DFNCVPTFLP ++Q+KFYLGFCK HLWPLFHYMLPM PDHGDRFDR LWQAY
Sbjct: 121 EVSHKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRLWQAY 180
Query: 181 VSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
VSANKIF+D+VMEVINP++D VW+HDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
Query: 241 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 300
TLPVRD++LRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV+IK
Sbjct: 241 TLPVRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIK 300
Query: 301 ILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLL 360
ILPVG+HMGRLESVLNLP+TA K+KEI++QF GKKLILG+DDMDIFKGISLKL+AME+L
Sbjct: 301 ILPVGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIAMERLF 360
Query: 361 QQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420
+ + MRGK+VL+QIVNPAR +GKDV+EAKKETY TAKRINE YGS Y+PV+LIDR VP
Sbjct: 361 ETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILIDRLVP 420
Query: 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE 480
R+EK+AYYA+A+CC+VNAVRDGMNLVPYKYI+CRQGTP MD+A+G DS TSMLVVSE
Sbjct: 421 RYEKTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSARTSMLVVSE 480
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPWD+DAVA+A+ LA+ M ++EK+LRHEKHY YVSTHDV YWA+SF
Sbjct: 481 FIGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKSF 540
Query: 541 AQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDG 600
QDLERACR+HY+KRCWGIG GL FRVLSLSPSFR+LSIDHIVS YR T+RRAIFLDYDG
Sbjct: 541 MQDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFLDYDG 600
Query: 601 TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660
T+VPE+SIIK+P EV+SVLK+LC DP NTVF+VSGRG SLS+WL+PCE LGIAAEHGY
Sbjct: 601 TLVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAAEHGY 660
Query: 661 FIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFG 720
FIRW+ EWET + A+ EWK +VEPVMRSY +ATDGS IE KESALVWHHQDADPDFG
Sbjct: 661 FIRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDADPDFG 720
Query: 721 SCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVM 780
+CQAKELLDHLESVLANEP VVKRGQHIVEVKPQGVSKGL EKV+ +M G PPD VM
Sbjct: 721 ACQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAVEKVIHQMVEDGNPPDMVM 780
Query: 781 CVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGLA 840
C+GDDRSDEDMFESILSTV+ P LP+PPEIFACTVGRKPSKAKY+LDD +DVLKLL GLA
Sbjct: 781 CIGDDRSDEDMFESILSTVTNPDLPMPPEIFACTVGRKPSKAKYFLDDVSDVLKLLGGLA 840
Query: 841 TA-SSSKPRHLAD-----IEVSFES 859
A SSSKP + +V+FES
Sbjct: 841 AATSSSKPEYQQQSSSLHTQVAFES 865
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|O80738|TPS10_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1411 bits (3653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 661/859 (76%), Positives = 750/859 (87%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGSRER 60
M S+S N LDLASG LLDIPQTPR LPRVMTVPGIISD DGY +DGDSD S RER
Sbjct: 1 MGSKSFGNLLDLASGDLLDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPCRER 60
Query: 61 KIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQE 120
KIIVAN LPL+ K+D+ETG+W FSLD D LLHLKDGFS +TEVIYVGSLK +D SEQ+
Sbjct: 61 KIIVANFLPLNGKKDSETGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSEQD 120
Query: 121 EVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAY 180
EV+ L ++FNCV TFLP D+ KKFYLGFCKQ LWPLFHYMLPMCPDHG+RFDR LWQAY
Sbjct: 121 EVSHNLFEEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQAY 180
Query: 181 VSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
VSANKIFADKVM VIN ++D +W+HDYHLMVLPTFLR+RF+R+KLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKIFADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
Query: 241 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 300
TLPVR+E+LRGLLNCDLIGFHTFDYARHFLSCC RMLGL+YESKRGHI LDY GRTV++K
Sbjct: 241 TLPVREELLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVFLK 300
Query: 301 ILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLL 360
ILP+G+HMGRLESVLNLPATA K+KEI++++ GKK+ILG+DDMDIFKG+SLK+LA E LL
Sbjct: 301 ILPIGIHMGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEHLL 360
Query: 361 QQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420
QQ+P M GK+VL+QIVNPARGSGKDVQEA+KETY T KRINE YGS +YEPVVLIDRPVP
Sbjct: 361 QQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRPVP 420
Query: 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE 480
RFEKSAYYA+AECCIVNAVRDGMNLVPYKY VCRQGTP M+++LG D P TS LV+SE
Sbjct: 421 RFEKSAYYALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLPRTSTLVLSE 480
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPWD+DAVAD++ AI M D EKQLRH+KH+ Y+STHDV YWARSF
Sbjct: 481 FIGCSPSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWARSF 540
Query: 541 AQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDG 600
+QDLERA RDHYSKRCWG+G GLGFR+++LSP+FRRLSI+ VSAYR++ +RAIFLDYDG
Sbjct: 541 SQDLERASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDYDG 600
Query: 601 TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660
T+VPETSI+K P EVIS LK LCSDPNNT+FIVSGRG+ SLSEWLAPCE LGIAAEHGY
Sbjct: 601 TLVPETSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEHGY 660
Query: 661 FIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFG 720
F RWNK+S+WET+ L DLEWKK+VEP+MR YTE TDGSNIE KESALVWHHQDADPDFG
Sbjct: 661 FTRWNKSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPDFG 720
Query: 721 SCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVM 780
SCQAKELLDHLE+VL NEP +V RG IVEVKPQGVSKGLV K+L RM G PDFV+
Sbjct: 721 SCQAKELLDHLETVLVNEPVIVNRGHQIVEVKPQGVSKGLVTGKILSRMLEDGIAPDFVV 780
Query: 781 CVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGLA 840
C+GDDRSDE+MFE+I +T+S S + EIFACTVGRKPSKAKY+LD+ +DV+KLLQGLA
Sbjct: 781 CIGDDRSDEEMFENISTTLSAQSSSMSTEIFACTVGRKPSKAKYFLDEVSDVVKLLQGLA 840
Query: 841 TASSSKPRHLADIEVSFES 859
SS KPR+ + + VSFES
Sbjct: 841 NTSSPKPRYPSHLRVSFES 859
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q0WUI9|TPS8_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 OS=Arabidopsis thaliana GN=TPS8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1397 bits (3616), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 666/859 (77%), Positives = 744/859 (86%), Gaps = 5/859 (0%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGSRER 60
M SRSCANFLDL+S LLD PQTPRTLPRVMTVPGII+D DG +++ S TS GSRER
Sbjct: 1 MVSRSCANFLDLSSWDLLDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTS--TSGGSRER 58
Query: 61 KIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQE 120
KIIVANMLPL +KRD ETG+WCF+ DED L L L+DGFSS+TE +YVGSL DI+ +EQE
Sbjct: 59 KIIVANMLPLQSKRDAETGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNEQE 118
Query: 121 EVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAY 180
EV+QKLL++FNCV TFL +LQ+ FYLGFCK LWPLFHYMLPM PDHGDRFDR LWQAY
Sbjct: 119 EVSQKLLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQAY 178
Query: 181 VSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
VSANKIF+D+VMEVINP+DD VW+ DYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR
Sbjct: 179 VSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 238
Query: 241 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 300
TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK
Sbjct: 239 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 298
Query: 301 ILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLL 360
ILPVGVHMGRLESVL+L +TA K KEI++QF GKKL+LGIDDMDIFKGISLKL+AME L
Sbjct: 299 ILPVGVHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEHLF 358
Query: 361 QQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420
+ + ++GKVVLVQIVNPAR SGKDV+EAK+ETY TA+RINE YG+ +Y+P+VLIDR VP
Sbjct: 359 ETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRLVP 418
Query: 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE 480
R EK+AYYA A+CC+VNAVRDGMNLVPYKYIVCRQGT + SP TS LVVSE
Sbjct: 419 RSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCRQGTRSNKAVVD---SSPRTSTLVVSE 475
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPWD+DAVA+A+ A+ M ++EKQLRHEKHY Y+STHDV YWA+SF
Sbjct: 476 FIGCSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSF 535
Query: 541 AQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDG 600
QDLERACRDHYSKRCWGIG GLGFRVLSLSPSFR+LS++HIV YRKT+RRAIFLDYDG
Sbjct: 536 MQDLERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYDG 595
Query: 601 TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660
T+VPE+SI++ P EV+SVLK LC DPNNTVFIVSGRGR SLS WL+PCE LGIAAEHGY
Sbjct: 596 TLVPESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHGY 655
Query: 661 FIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFG 720
FIRW EWET + D EW+ +VEPVMRSY EATDG++IE KESALVWHHQDADPDFG
Sbjct: 656 FIRWKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFG 715
Query: 721 SCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVM 780
SCQAKE+LDHLESVLANEP VVKRGQHIVEVKPQGVSKGL AEKV+ M G PP+ VM
Sbjct: 716 SCQAKEMLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAAEKVIREMVERGEPPEMVM 775
Query: 781 CVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGLA 840
C+GDDRSDEDMFESILSTV+ P L V PE+FACTVGRKPSKAKY+LDD DVLKLL+GL
Sbjct: 776 CIGDDRSDEDMFESILSTVTNPELLVQPEVFACTVGRKPSKAKYFLDDEADVLKLLRGLG 835
Query: 841 TASSSKPRHLADIEVSFES 859
+SSS + +V+FES
Sbjct: 836 DSSSSLKPSSSHTQVAFES 854
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O23617|TPS5_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana GN=TPS5 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1189 bits (3076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/846 (65%), Positives = 677/846 (80%), Gaps = 2/846 (0%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADG-YDSNDGDSDATSSGSRE 59
M SRS +N LDLASG + + PRV TV G++S+ D +SN SDA SS +++
Sbjct: 1 MVSRSYSNLLDLASGNFHSFSREKKRFPRVATVTGVLSELDDDNNSNSVCSDAPSSVTQD 60
Query: 60 RKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQ 119
R IIV N LP+ + R++ G+ FS D D LLL LKDG D EV+Y+G LK ID EQ
Sbjct: 61 RIIIVGNQLPIKSHRNS-AGKLSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTVEQ 119
Query: 120 EEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQA 179
++V+Q+LL++F CVP ++P +L K+Y GFCKQHLWPLFHYMLP+ PD G RFDR LWQA
Sbjct: 120 DDVSQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLWQA 179
Query: 180 YVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY 239
Y+S NKIFADKVMEVI+PDDD VWVHDYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSEIY
Sbjct: 180 YLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 239
Query: 240 RTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 299
RTLPVR+E+LR LLN DLIGFHTFDYARHFLSCCSRMLGL Y+SKRG IGL+Y+GRTV I
Sbjct: 240 RTLPVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTVSI 299
Query: 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQL 359
KILPVG+H+ +L+S+LNLP T TK+ E+ QF +K++LG+DDMDIFKGISLKLLAMEQL
Sbjct: 300 KILPVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAMEQL 359
Query: 360 LQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419
L QHP RG+VVLVQI NPARG GKDVQE + ET T KRINE++G P Y+PVVLID P+
Sbjct: 360 LTQHPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDTPL 419
Query: 420 PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS 479
FE+ AYY +AECC+V AVRDGMNL+PY+YI+CRQG P ++E +G + + SMLVVS
Sbjct: 420 QFFERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPSAAKKSMLVVS 479
Query: 480 EFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539
EFIGCSPSLSGAIRVNPW+IDAV +AM A+ + ++EKQ+RHEKH++YVSTHDVAYWARS
Sbjct: 480 EFIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWARS 539
Query: 540 FAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYD 599
F QDLERAC DH KRCWGIG GLGFRV++L PSF++LSI+HIVSAY++T+ RAI LDYD
Sbjct: 540 FIQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLDYD 599
Query: 600 GTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHG 659
GT+V SI +P E I +L L SDP N V++VSG+ R +L+EW + C+ LG+ AEHG
Sbjct: 600 GTMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAEHG 659
Query: 660 YFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDF 719
YFIR N ++WET+ L + EWK+I EPVMR YTE TDGS IE KE+ALVW++Q ADPDF
Sbjct: 660 YFIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADPDF 719
Query: 720 GSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFV 779
GSCQAKEL++HLESVL N+P VK GQ +VEVKPQGV+KGLVAE++L M G+ DF+
Sbjct: 720 GSCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQGVNKGLVAERLLTTMQEKGKLLDFI 779
Query: 780 MCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGL 839
+CVGDDRSDEDMFE I+S GP+L EIFACTVG+KPSKAKYYLDD +++++L GL
Sbjct: 780 LCVGDDRSDEDMFEVIMSAKDGPALSPVAEIFACTVGQKPSKAKYYLDDTAEIIRMLDGL 839
Query: 840 ATASSS 845
A +++
Sbjct: 840 AATNTT 845
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q94AH8|TPS6_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/860 (64%), Positives = 666/860 (77%), Gaps = 23/860 (2%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGSRER 60
M SRS +N L+LASG + R +PR+M V GI+S+ D DS T ++R
Sbjct: 1 MVSRSYSNLLELASGDSPTFGRMNRQIPRIMAVAGIMSNIDN------DSKDTDLSPKDR 54
Query: 61 KIIVANMLPLHAKRDTETGR-------------WCFSLDEDLLLLHLKDGFSSDT-EVIY 106
IIVAN LP+ A+R + W FS DE+ LLL LKDG + EVIY
Sbjct: 55 IIIVANELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVIY 114
Query: 107 VGSLKADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCP 166
VG LK +I +EQEEV Q LL+ F CVPTFLP DL ++Y GFCKQ LWPLFHYMLP+ P
Sbjct: 115 VGCLKEEIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSP 174
Query: 167 DHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLG 226
D G RFDR LWQAYVS NKIFAD++MEVINP+DD VW+HDYHLMVLPTFLRKRFNR+KLG
Sbjct: 175 DLGGRFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLG 234
Query: 227 FFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRG 286
FFLHSPFPSSEIY+TLP+R+E+LR LLN DLIGFHTFDYARHFLSCCSRMLGL YESKRG
Sbjct: 235 FFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRG 294
Query: 287 HIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMD 344
+IGL+Y+GRTV IKILPVG+HMG+L+SVL+LP T K+ E+ +++ G+ ++LG+DDMD
Sbjct: 295 YIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMD 354
Query: 345 IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVY 404
IFKGI+LKLLAMEQLL QHP +GKVVLVQI NPARG GKDV+E + ETY T KRINE +
Sbjct: 355 IFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETF 414
Query: 405 GSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEAL 464
G P Y+P+VLID P+ +E+ AYY VAECC+V AVRDGMNL+PY+YIV RQG +D+ L
Sbjct: 415 GRPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKIL 474
Query: 465 GRERDSPHT-SMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEK 523
E ++ + SMLVVSEFIGCSPSLSGAIRVNPW++DAVADAM A+ + + EKQLRHEK
Sbjct: 475 KLEANNRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEK 534
Query: 524 HYRYVSTHDVAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIV 583
HY+YVSTHDV YWARSF QDLER+C +H +RCWGIG GL FRV++L SFR+LS++HIV
Sbjct: 535 HYKYVSTHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIV 594
Query: 584 SAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS 643
SAY++T+ RAI LDYD T++P+ SI K P + I +L TLC D N VFIVS + R +LS
Sbjct: 595 SAYKRTKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLS 654
Query: 644 EWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEI 703
+W +PCE LGIAAEHGYF+R K EWE D WK+I EPVM YTE TDGS IE
Sbjct: 655 DWFSPCEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIED 714
Query: 704 KESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAE 763
KE+ALVW ++DADPDFGSCQAKELLDHLESVLANEP VKRGQ+ VEVKPQGVSKGL+A
Sbjct: 715 KETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLIAR 774
Query: 764 KVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAK 823
++L M G P+FV+C+GDDRSDEDMFE I S+ GPS+ EIFACTVG+KPSKAK
Sbjct: 775 RMLSMMQERGTLPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSKAK 834
Query: 824 YYLDDATDVLKLLQGLATAS 843
YYLDD T++++L+ GLA+ +
Sbjct: 835 YYLDDTTEIVRLMHGLASVT 854
|
Regulates plant architecture, shape of epidermal pavement cells and branching of trichomes. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LMI0|TPS7_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1128 bits (2917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/847 (63%), Positives = 659/847 (77%), Gaps = 10/847 (1%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGSRER 60
M SRS N LDLASG + + R LPRVMTVPG +S+ D + SD SS S +R
Sbjct: 1 MISRSYTNLLDLASGNFPVMGRERRRLPRVMTVPGNVSEFDEDQAYSVSSDNPSSVSSDR 60
Query: 61 KIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQE 120
IIVAN LPL A++ G W FS D+D L L LKDG D E++YVGSL D+D++EQ+
Sbjct: 61 MIIVANRLPLKAEK--RNGSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNEQD 118
Query: 121 EVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAY 180
+VAQ LLD F CVPTF P DLQ KFY GFCK+ +WPLFHYMLP DHG RFDR LW+AY
Sbjct: 119 DVAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWEAY 178
Query: 181 VSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
V+ NK+F KV+EVINPDDD VW+HDYHLMVLPTFLR+RFNRI++GFFLHSPFPSSEIYR
Sbjct: 179 VATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEIYR 238
Query: 241 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 300
+LPVR+EIL+ LLN DLIGFHTFDYARHFL+CCSRMLGL+Y+SKRG+IGL+Y+GRTV IK
Sbjct: 239 SLPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVGIK 298
Query: 301 ILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLL 360
I+PVG++MGR++SV+ K+ E+ +F+GK ++LGIDDMDIFKGI+LKLLAMEQ+L
Sbjct: 299 IMPVGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQML 358
Query: 361 QQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420
+QHP RG+ VLVQIVNPARG G DV+E + E + +RIN +G P Y+P++ ID PV
Sbjct: 359 RQHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTPVS 418
Query: 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERD--SPHTSMLVV 478
E +AYY +AEC +V AVRDGMNL PY+YIVCRQG LG E D P SMLV
Sbjct: 419 INEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQGL------LGSESDFSGPKKSMLVA 472
Query: 479 SEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538
SEFIGCSPSLSGAIRVNPW+++A +A+ A++M D+EKQLRHEKH+RYVSTHDVAYW+R
Sbjct: 473 SEFIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWSR 532
Query: 539 SFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDY 598
SF QDLER C DH+ KRCWG+G+ GFRV++L P+FR+LSI IVS Y++ + RAI LDY
Sbjct: 533 SFLQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLDY 592
Query: 599 DGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEH 658
DGT++P+ SI K+P EV++ L LC D N++FIVSGRGR SLS+W PC+ +GIAAEH
Sbjct: 593 DGTLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAEH 652
Query: 659 GYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPD 718
GYF++W+ + EWET +D W +IVEPVM+ YTE+TDGS+IEIKESALVW ++DADP
Sbjct: 653 GYFLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADPG 712
Query: 719 FGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDF 778
FGS QAKE+L+HLESVLANEP VK G +IVEVKPQGVSKG V+EK+ M G+P DF
Sbjct: 713 FGSLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQGVSKGSVSEKIFSSMAGKGKPVDF 772
Query: 779 VMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQG 838
V+C+GDDRSDEDMFE+I + +S L +FACTVG+KPSKAKYYLDD T+V +L+
Sbjct: 773 VLCIGDDRSDEDMFEAIGNAMSKRLLCDNALVFACTVGQKPSKAKYYLDDTTEVTCMLES 832
Query: 839 LATASSS 845
LA AS +
Sbjct: 833 LAEASEA 839
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9ZV48|TPS11_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana GN=TPS11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1092 bits (2825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/813 (63%), Positives = 635/813 (78%), Gaps = 5/813 (0%)
Query: 33 VPGIISDADGYDSNDGDSDATSSGSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLL 92
+P ++ G +++D + A + + ++I+V+N LPL A RD + +WCF D D L L
Sbjct: 26 IPNAVTKLSGLETDDPNGGAWVT--KPKRIVVSNQLPLRAHRDISSNKWCFEFDNDSLYL 83
Query: 93 HLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQ 152
LKDGF +TEV+YVGSL AD+ SEQE+V+Q LL+ F CVPTFLP DL K+Y GFCK
Sbjct: 84 QLKDGFPPETEVVYVGSLNADVLPSEQEDVSQFLLEKFQCVPTFLPSDLLNKYYHGFCKH 143
Query: 153 HLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVL 212
+LWP+FHY+LPM G FDR W+AY + NKIFADK+ EV+NPDDD VW+HDYHLM+L
Sbjct: 144 YLWPIFHYLLPMTQAQGSLFDRSNWRAYTTVNKIFADKIFEVLNPDDDYVWIHDYHLMIL 203
Query: 213 PTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272
PTFLR RF+RIKLG FLHSPFPSSEIYRTLPVRDEIL+G LNCDL+GFHTFDYARHFLSC
Sbjct: 204 PTFLRNRFHRIKLGIFLHSPFPSSEIYRTLPVRDEILKGFLNCDLVGFHTFDYARHFLSC 263
Query: 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFD 332
CSRMLGLDYESKRG+IGL+YFGRTV IKILPVG+HMG++ES+ TA K+K + ++F
Sbjct: 264 CSRMLGLDYESKRGYIGLEYFGRTVSIKILPVGIHMGQIESIKASEKTAEKVKRLRERFK 323
Query: 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKE 392
G ++LG+DD+D+FKGISLK AM QLL+Q+ +RGKVVLVQI NPAR SGKDVQ+ +K+
Sbjct: 324 GNIVMLGVDDLDMFKGISLKFWAMGQLLEQNEELRGKVVLVQITNPARSSGKDVQDVEKQ 383
Query: 393 TYLTAKRINEVYGSP-NYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYI 451
L A IN +G P Y+P+V I+ PV +K AYYA++EC +VNAVRDGMNLVPYKY
Sbjct: 384 INLIADEINSKFGRPGGYKPIVFINGPVSTLDKVAYYAISECVVVNAVRDGMNLVPYKYT 443
Query: 452 VCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAIN 511
V RQG+P +D ALG D S+++VSEFIGCSPSLSGAIRVNPW+IDAV +AM+ A+
Sbjct: 444 VTRQGSPALDAALGFGEDDVRKSVIIVSEFIGCSPSLSGAIRVNPWNIDAVTNAMSSAMT 503
Query: 512 MRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLS 571
M D EK LRH+KH++Y+S+H+VAYWARS+ QDL+RAC+DHY+KR WG+G GL F+V++L
Sbjct: 504 MSDKEKNLRHQKHHKYISSHNVAYWARSYDQDLQRACKDHYNKRFWGVGFGLFFKVVALD 563
Query: 572 PSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTV 631
P+FRRL + IV AYR++ R I LDYDGT++ + ++ K P ++IS+L LC DP+N V
Sbjct: 564 PNFRRLCGETIVPAYRRSSSRLILLDYDGTMMDQDTLDKRPSDDLISLLNRLCDDPSNLV 623
Query: 632 FIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRS 691
FIVSGRG+ LS+W C LGI+AEHGYF RWN S WET+ L ADL WKKI +PVM
Sbjct: 624 FIVSGRGKDPLSKWFDSCPNLGISAEHGYFTRWNSNSPWETSELPADLSWKKIAKPVMNH 683
Query: 692 YTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEV 751
Y EATDGS IE KESA+VWHHQ+AD FGS QAKELLDHLESVL NEP VVKRGQHIVEV
Sbjct: 684 YMEATDGSFIEEKESAMVWHHQEADHSFGSWQAKELLDHLESVLTNEPVVVKRGQHIVEV 743
Query: 752 KPQGVSKGLVAEKVLVRMFN-GGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEI 810
KPQGVSKG V E ++ M N G+ PDF++C+GDDRSDEDMF+SI+ S+ + E+
Sbjct: 744 KPQGVSKGKVVEHLIATMRNTKGKRPDFLLCIGDDRSDEDMFDSIVKHQDVSSIGL-EEV 802
Query: 811 FACTVGRKPSKAKYYLDDATDVLKLLQGLATAS 843
FACTVG+KPSKAKYYLDD V+K+L+ LA+AS
Sbjct: 803 FACTVGQKPSKAKYYLDDTPSVIKMLEWLASAS 835
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 498 bits (1282), Expect = e-140, Method: Compositional matrix adjust.
Identities = 274/784 (34%), Positives = 446/784 (56%), Gaps = 66/784 (8%)
Query: 55 SGSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADI 114
+G R I+V+N LP+ K+++ G+W + L+ L G S+ I+VG + A+I
Sbjct: 12 TGFSGRLIVVSNRLPVSIKKES-NGKWSCKMSSGGLVAAL-SGLKSN--FIWVGWIGAEI 67
Query: 115 DASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDR 174
+ +++E+ + L D++C+P FL + + Y GF LWPLFHY LP D+ DR
Sbjct: 68 EEDDRKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHY-LPGDLDYDDR--- 123
Query: 175 VLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFP 234
+W +YV AN+ F+ V E++ P+D VWVHDYH+M+LP L+++ ++GFFLH PFP
Sbjct: 124 -IWNSYVEANEQFSSVVAEILKPND-LVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFP 181
Query: 235 SSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFG 294
SSEI+R LP R EIL G+LNC LIGFHT+DYARHFL C+R++GL+ G+ +
Sbjct: 182 SSEIFRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPN----GVYFKD 237
Query: 295 RTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLL 354
R V + + PVG+ + L +IKE+++ F+G K+++GID +D KGI KL
Sbjct: 238 RFVQVGVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQ 297
Query: 355 AMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVL 414
A+E+L Q++P +GK+VL+Q+ P+R ++ Q+ KKE RIN +YGS Y P+
Sbjct: 298 AIERLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHY 357
Query: 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTS 474
+ + V E +A Y +++ ++ ++RDGMNLV +YIVC+ + +
Sbjct: 358 LFQSVDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQ---------------TENNG 402
Query: 475 MLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVA 534
+L++SEF G + SLSGA+ +NPW+ + VAD++ ++ M E++ +H+ +YV+ H +
Sbjct: 403 VLILSEFTGAAQSLSGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTAS 462
Query: 535 YWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAI 594
+W F ++L +A + + ++L I+ +V Y++++RR +
Sbjct: 463 HWGLGFVKELNKASSN-----------------TDKMVTIQKLDIEKVVDIYKQSKRRLL 505
Query: 595 FLDYDGTVVPETSI--IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML 652
YDGT++P ++ + P E+++ L +DP V+I+SGR + +LSEW + +
Sbjct: 506 IFAYDGTLIPYNNVPQLSRPSQELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQ-I 564
Query: 653 GIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHH 712
G++AE+G F + +++EWE DL WK+ + P+ + +T T GS E KE WH+
Sbjct: 565 GLSAEYGCFFKLPESTEWEQQVPSMDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHY 624
Query: 713 QDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNG 772
++ADP FGS QA+EL HL+ N P V G + V+ ++ +KV+
Sbjct: 625 RNADPIFGSIQARELHLHLD----NLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTIPK 680
Query: 773 GRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDV 832
G D ++ +GD + S L T G +IF +VG+K K Y+L D +V
Sbjct: 681 GL--DLILLIGDTH----IHPSELPTFDG-------KIFNISVGKKSVKDSYHLSDPAEV 727
Query: 833 LKLL 836
L+
Sbjct: 728 NYLI 731
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 288/822 (35%), Positives = 444/822 (54%), Gaps = 60/822 (7%)
Query: 54 SSGSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKAD 113
+ G R R ++VAN LP+ AKR E W + L+ L G +S + +VG D
Sbjct: 7 ARGERPRLLVVANRLPVSAKRTGENS-WSLEMSPGGLVSGLL-GITSQFDTKWVGWPGVD 64
Query: 114 IDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYM-LPMCPDH-GDR 171
+ ++ + L + C+P FL + + ++Y G+C LWP+ H+M LP H ++
Sbjct: 65 VHDEIEKNALTESLAEMKCIPVFL-NGVFDQYYNGYCNGILWPILHHMGLPQEDQHDTNQ 123
Query: 172 FDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHS 231
+ AY AN++F D +++ + D VW HDYHLM LP +L++ N+IK+G+FLHS
Sbjct: 124 TFETQYDAYKKANRMFLDVIIDNYE-EGDIVWCHDYHLMFLPQYLKEYNNKIKVGWFLHS 182
Query: 232 PFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD 291
PFPSSE+Y+TLP R E+LR +L DL+GFHT+D+ARHFLS C+R+LG++ H G+
Sbjct: 183 PFPSSEVYKTLPSRSELLRAILAADLLGFHTYDFARHFLSTCTRILGVE----GTHEGVV 238
Query: 292 YFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISL 351
Y GR + + P+G+ R LP ++ E++++F GKK+ILG+D +D+ KGI
Sbjct: 239 YQGRVTRVAVFPIGIDPDRFIRTCKLPEVTQQMNELQEKFAGKKVILGVDRLDMIKGIPQ 298
Query: 352 KLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411
K LA E+ L+++P R KVVLVQI P R + ++ K + + RIN +GS + P
Sbjct: 299 KYLAFEKFLEENPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGRFGSVSSLP 358
Query: 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSP 471
+ +D V A YA+A+ +V ++RDGMNLV Y+++ C++
Sbjct: 359 IHHLDCSVDFNYLCAIYAIADVMLVTSLRDGMNLVSYEFVACQEA--------------- 403
Query: 472 HTSMLVVSEFIGCSPSLS-GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530
+LV+SEF G SL GA+ VNPWD+ V+ A+ A+NM E++ RH +++YV T
Sbjct: 404 KKGVLVLSEFAGAGQSLGVGALIVNPWDVTEVSSAIKEALNMPAEERETRHRSNFQYVCT 463
Query: 531 HDVAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTE 590
H W F +L + + R + L +L ++ Y ++
Sbjct: 464 HSAEKWGLDFMSELNGIIPES----------EMQMRKIPL-----QLPEQDVIQQYSQSN 508
Query: 591 RRAIFLDYDGTVV-PETSIIKSP----GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEW 645
R I L + GT+ P S K PE+ LK LC+DP TV ++S G++ L++
Sbjct: 509 NRLIILGFFGTLAEPMNSGTKEMDLKLNPELKGTLKALCNDPKTTVVVLSRSGKNILNKN 568
Query: 646 LAPCEMLGIAAEHGYFIRWNKTSEWETNH-LGADLEWKKIVEPVMRSYTEATDGSNIEIK 704
+ +AAE+G F + T EW TN +L+W V+ V + +T+ T S E
Sbjct: 569 FGESNIW-LAAENGMFEK-QTTGEWVTNMPQNVNLDWVDGVKNVFKYFTDRTPRSYFEAS 626
Query: 705 ESALVWHHQDADPDFGSCQAKELLDHL-ESVLANEPAVVKRGQHIVEVKPQGVSKGLVAE 763
E++LVW+++ AD +FG QA++LL +L ++N V RG H VEV G +KG
Sbjct: 627 ETSLVWNYEYADVEFGRAQARDLLQYLWAGPISNASVDVVRGNHSVEVHAIGETKGAAIG 686
Query: 764 KVL---VRMFNGGRPPDFVMCVGDD-RSDEDM---FES-ILSTVSGPSLPVPPE-IFACT 814
++L V + P DFV C G DED+ FES ILS+ S L + E F+
Sbjct: 687 RILGEIVHRKSMTTPIDFVFCSGYFLEKDEDIYTFFESKILSSKSPNGLDLKKENYFSAA 746
Query: 815 VGRKPSKAKYYLDDATDVLKLLQGLA-TASSSKPRHLADIEV 855
+G+ +KA+Y +D A V+ LL LA A ++ +D E+
Sbjct: 747 IGQARTKARYVIDSAHGVVDLLHKLAVVADTTMTDSFSDSEI 788
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54NU9|TPSB_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] B OS=Dictyostelium discoideum GN=tpsB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 442 bits (1137), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/706 (33%), Positives = 384/706 (54%), Gaps = 57/706 (8%)
Query: 143 KKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCV 202
+ +Y G+CK LW L HY + R W+ YV N++FA+K+ V P D +
Sbjct: 136 ENYYKGYCKNGLWLLLHYQMNFI-----RMQSEWWEEYVGVNQMFAEKIASVWRPSD-II 189
Query: 203 WVHDYHLMVLPTFLRKRFN-RIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFH 261
W+HDYHLM++P LR+ +GFF H+PFPS E++R LP R E+L+G+L+ +LIGF
Sbjct: 190 WIHDYHLMLVPQMLRQLLPPEASIGFFFHAPFPSYELFRILPNRKELLKGILSSNLIGFQ 249
Query: 262 TFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATA 321
+F+Y RHF S C+R+L L+ K I D +++ P+GV LNLP +
Sbjct: 250 SFEYVRHFKSSCARLLDLEVHPKGLEIFEDGSTHFTKLQVYPIGVDYNDFAKNLNLPEVS 309
Query: 322 TKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARG 381
++++ + K F GKK+++ D +D +G+ KL EQLL HP GK+V +QI P
Sbjct: 310 SRVESLRKIFKGKKVVVARDRLDQIEGVPRKLEVFEQLLNDHPEYIGKLVFIQIYEPTVE 369
Query: 382 SGKDVQEAK---KETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNA 438
G + E K K RIN +G ++ P+ I++ + E SA Y +A+ ++
Sbjct: 370 EGDETDEQKILHKTVNEMVGRINGKFGKLSFNPIEYINKKISYEELSALYKLADIALITP 429
Query: 439 VRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWD 498
+RDGMNL ++Y+VC++ + +L++SEF G + L G+I VNP+
Sbjct: 430 IRDGMNLTSHEYVVCQKD---------------NFGVLILSEFAGAARCLGGSIIVNPFS 474
Query: 499 IDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDHYSKRCWG 558
+ +A+ A+NM +++L+H+ +Y YV + ++W + F DL A +
Sbjct: 475 KKEIMEAIIEALNMSMHDRKLKHQINYNYVLANTSSFWGKRFLCDLNEATQKEI------ 528
Query: 559 IGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKS--PGPEV 616
+ S R + I +Y+K + R FLDYDGT+ P + P ++
Sbjct: 529 -----------METSVPRANFQEIEDSYKKAKVRVFFLDYDGTLTPLVRLPSQAMPSKQL 577
Query: 617 ISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLG 676
I VL L D N V+++SGR RSSL +WL +G++ EHG F R ++ T
Sbjct: 578 IDVLSKLTEDRRNEVYVISGRDRSSLEKWLGHLP-IGMSCEHGVFTRQPGENQPWTESPN 636
Query: 677 ADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLA 736
A+++WK V +M+ + + T GS E K+ + WH+++ADPDFG QAKEL+ L SV
Sbjct: 637 AEVQWKDTVLSIMQDFEDRTPGSMTETKQVNITWHYRNADPDFGQFQAKELIAQLRSVAN 696
Query: 737 NEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESIL 796
P + G+ +EVKP G++KG + + +L ++ DF++C+GDD++DEDMF+++
Sbjct: 697 KYPLDILSGKKAIEVKPIGINKGEIVKMILQKI-----DADFILCIGDDKTDEDMFKALY 751
Query: 797 STVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGLATA 842
+ PS I C + +KA+ ++ +++VL LL L+ +
Sbjct: 752 NV---PSFT----IRVCGDLEESTKARGVVESSSEVLTLLNRLSLS 790
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 861 | ||||||
| TAIR|locus:2199847 | 867 | TPS9 "trehalose-phosphatase/sy | 0.996 | 0.989 | 0.785 | 0.0 | |
| TAIR|locus:2195678 | 861 | TPS10 "trehalose phosphate syn | 0.997 | 0.997 | 0.759 | 0.0 | |
| TAIR|locus:2016179 | 856 | TPS8 "trehalose-6-phosphatase | 0.991 | 0.997 | 0.768 | 0.0 | |
| TAIR|locus:2129425 | 862 | TPS5 "trehalose phosphatase/sy | 0.980 | 0.979 | 0.647 | 2.3e-307 | |
| TAIR|locus:2200216 | 860 | ATTPS6 [Arabidopsis thaliana ( | 0.977 | 0.979 | 0.632 | 1.1e-295 | |
| TAIR|locus:2202290 | 851 | TPS7 "trehalose-phosphatase/sy | 0.982 | 0.994 | 0.619 | 9.5e-295 | |
| TAIR|locus:2054027 | 862 | TPS11 "trehalose phosphatase/s | 0.944 | 0.943 | 0.619 | 9.7e-286 | |
| DICTYBASE|DDB_G0284975 | 790 | tpsB "alpha,alpha-trehalose-ph | 0.483 | 0.526 | 0.339 | 2.7e-124 | |
| ASPGD|ASPL0000037859 | 908 | orlA [Emericella nidulans (tax | 0.406 | 0.385 | 0.343 | 2.4e-105 | |
| TAIR|locus:2137712 | 795 | TPS4 "trehalose-6-phosphatase | 0.761 | 0.825 | 0.332 | 7.3e-105 |
| TAIR|locus:2199847 TPS9 "trehalose-phosphatase/synthase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3626 (1281.5 bits), Expect = 0., P = 0.
Identities = 680/866 (78%), Positives = 756/866 (87%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGS-RE 59
M SRSCANFLDLAS LLD PQT R LPRVMTVPGIIS+ DG S DG SD SS S RE
Sbjct: 1 MVSRSCANFLDLASWDLLDFPQTQRALPRVMTVPGIISELDGGYS-DGSSDVNSSNSSRE 59
Query: 60 RKIIVANMLPLHAKRDTETGRWCFSXXXXXXXXXXXXGFSSDTEVIYVGSLKADIDASEQ 119
RKIIVANMLPL AKRDTETG+WCFS GFSSDTE +Y+GSL ADI SEQ
Sbjct: 60 RKIIVANMLPLQAKRDTETGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGISEQ 119
Query: 120 EEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQA 179
EEV+ KLL DFNCVPTFLP ++Q+KFYLGFCK HLWPLFHYMLPM PDHGDRFDR LWQA
Sbjct: 120 EEVSHKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRLWQA 179
Query: 180 YVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY 239
YVSANKIF+D+VMEVINP++D VW+HDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY
Sbjct: 180 YVSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY 239
Query: 240 RTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 299
RTLPVRD++LRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV+I
Sbjct: 240 RTLPVRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFI 299
Query: 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQL 359
KILPVG+HMGRLESVLNLP+TA K+KEI++QF GKKLILG+DDMDIFKGISLKL+AME+L
Sbjct: 300 KILPVGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIAMERL 359
Query: 360 LQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419
+ + MRGK+VL+QIVNPAR +GKDV+EAKKETY TAKRINE YGS Y+PV+LIDR V
Sbjct: 360 FETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILIDRLV 419
Query: 420 PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS 479
PR+EK+AYYA+A+CC+VNAVRDGMNLVPYKYI+CRQGTP MD+A+G DS TSMLVVS
Sbjct: 420 PRYEKTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSARTSMLVVS 479
Query: 480 EFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539
EFIGCSPSLSGAIRVNPWD+DAVA+A+ LA+ M ++EK+LRHEKHY YVSTHDV YWA+S
Sbjct: 480 EFIGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKS 539
Query: 540 FAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYD 599
F QDLERACR+HY+KRCWGIG GL FRVLSLSPSFR+LSIDHIVS YR T+RRAIFLDYD
Sbjct: 540 FMQDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFLDYD 599
Query: 600 GTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHG 659
GT+VPE+SIIK+P EV+SVLK+LC DP NTVF+VSGRG SLS+WL+PCE LGIAAEHG
Sbjct: 600 GTLVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAAEHG 659
Query: 660 YFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDF 719
YFIRW+ EWET + A+ EWK +VEPVMRSY +ATDGS IE KESALVWHHQDADPDF
Sbjct: 660 YFIRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDADPDF 719
Query: 720 GSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFV 779
G+CQAKELLDHLESVLANEP VVKRGQHIVEVKPQGVSKGL EKV+ +M G PPD V
Sbjct: 720 GACQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAVEKVIHQMVEDGNPPDMV 779
Query: 780 MCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGL 839
MC+GDDRSDEDMFESILSTV+ P LP+PPEIFACTVGRKPSKAKY+LDD +DVLKLL GL
Sbjct: 780 MCIGDDRSDEDMFESILSTVTNPDLPMPPEIFACTVGRKPSKAKYFLDDVSDVLKLLGGL 839
Query: 840 ATA-SSSKPRHLAD-----IEVSFES 859
A A SSSKP + +V+FES
Sbjct: 840 AAATSSSKPEYQQQSSSLHTQVAFES 865
|
|
| TAIR|locus:2195678 TPS10 "trehalose phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3539 (1250.8 bits), Expect = 0., P = 0.
Identities = 652/859 (75%), Positives = 741/859 (86%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGSRER 60
M S+S N LDLASG LLDIPQTPR LPRVMTVPGIISD DGY +DGDSD S RER
Sbjct: 1 MGSKSFGNLLDLASGDLLDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPCRER 60
Query: 61 KIIVANMLPLHAKRDTETGRWCFSXXXXXXXXXXXXGFSSDTEVIYVGSLKADIDASEQE 120
KIIVAN LPL+ K+D+ETG+W FS GFS +TEVIYVGSLK +D SEQ+
Sbjct: 61 KIIVANFLPLNGKKDSETGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSEQD 120
Query: 121 EVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAY 180
EV+ L ++FNCV TFLP D+ KKFYLGFCKQ LWPLFHYMLPMCPDHG+RFDR LWQAY
Sbjct: 121 EVSHNLFEEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQAY 180
Query: 181 VSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
VSANKIFADKVM VIN ++D +W+HDYHLMVLPTFLR+RF+R+KLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKIFADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
Query: 241 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 300
TLPVR+E+LRGLLNCDLIGFHTFDYARHFLSCC RMLGL+YESKRGHI LDY GRTV++K
Sbjct: 241 TLPVREELLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVFLK 300
Query: 301 ILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLL 360
ILP+G+HMGRLESVLNLPATA K+KEI++++ GKK+ILG+DDMDIFKG+SLK+LA E LL
Sbjct: 301 ILPIGIHMGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEHLL 360
Query: 361 QQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420
QQ+P M GK+VL+QIVNPARGSGKDVQEA+KETY T KRINE YGS +YEPVVLIDRPVP
Sbjct: 361 QQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRPVP 420
Query: 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE 480
RFEKSAYYA+AECCIVNAVRDGMNLVPYKY VCRQGTP M+++LG D P TS LV+SE
Sbjct: 421 RFEKSAYYALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLPRTSTLVLSE 480
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPWD+DAVAD++ AI M D EKQLRH+KH+ Y+STHDV YWARSF
Sbjct: 481 FIGCSPSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWARSF 540
Query: 541 AQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDG 600
+QDLERA RDHYSKRCWG+G GLGFR+++LSP+FRRLSI+ VSAYR++ +RAIFLDYDG
Sbjct: 541 SQDLERASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDYDG 600
Query: 601 TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660
T+VPETSI+K P EVIS LK LCSDPNNT+FIVSGRG+ SLSEWLAPCE LGIAAEHGY
Sbjct: 601 TLVPETSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEHGY 660
Query: 661 FIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFG 720
F RWNK+S+WET+ L DLEWKK+VEP+MR YTE TDGSNIE KESALVWHHQDADPDFG
Sbjct: 661 FTRWNKSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPDFG 720
Query: 721 SCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVM 780
SCQAKELLDHLE+VL NEP +V RG IVEVKPQGVSKGLV K+L RM G PDFV+
Sbjct: 721 SCQAKELLDHLETVLVNEPVIVNRGHQIVEVKPQGVSKGLVTGKILSRMLEDGIAPDFVV 780
Query: 781 CVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGLA 840
C+GDDRSDE+MFE+I +T+S S + EIFACTVGRKPSKAKY+LD+ +DV+KLLQGLA
Sbjct: 781 CIGDDRSDEEMFENISTTLSAQSSSMSTEIFACTVGRKPSKAKYFLDEVSDVVKLLQGLA 840
Query: 841 TASSSKPRHLADIEVSFES 859
SS KPR+ + + VSFES
Sbjct: 841 NTSSPKPRYPSHLRVSFES 859
|
|
| TAIR|locus:2016179 TPS8 "trehalose-6-phosphatase synthase S8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3515 (1242.4 bits), Expect = 0., P = 0.
Identities = 660/859 (76%), Positives = 739/859 (86%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGSRER 60
M SRSCANFLDL+S LLD PQTPRTLPRVMTVPGII+D DG +++ S TS GSRER
Sbjct: 1 MVSRSCANFLDLSSWDLLDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTS--TSGGSRER 58
Query: 61 KIIVANMLPLHAKRDTETGRWCFSXXXXXXXXXXXXGFSSDTEVIYVGSLKADIDASEQE 120
KIIVANMLPL +KRD ETG+WCF+ GFSS+TE +YVGSL DI+ +EQE
Sbjct: 59 KIIVANMLPLQSKRDAETGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNEQE 118
Query: 121 EVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAY 180
EV+QKLL++FNCV TFL +LQ+ FYLGFCK LWPLFHYMLPM PDHGDRFDR LWQAY
Sbjct: 119 EVSQKLLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQAY 178
Query: 181 VSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
VSANKIF+D+VMEVINP+DD VW+ DYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR
Sbjct: 179 VSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 238
Query: 241 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 300
TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK
Sbjct: 239 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 298
Query: 301 ILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLL 360
ILPVGVHMGRLESVL+L +TA K KEI++QF GKKL+LGIDDMDIFKGISLKL+AME L
Sbjct: 299 ILPVGVHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEHLF 358
Query: 361 QQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420
+ + ++GKVVLVQIVNPAR SGKDV+EAK+ETY TA+RINE YG+ +Y+P+VLIDR VP
Sbjct: 359 ETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRLVP 418
Query: 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE 480
R EK+AYYA A+CC+VNAVRDGMNLVPYKYIVCRQGT ++A+ SP TS LVVSE
Sbjct: 419 RSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCRQGTR-SNKAV--VDSSPRTSTLVVSE 475
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPWD+DAVA+A+ A+ M ++EKQLRHEKHY Y+STHDV YWA+SF
Sbjct: 476 FIGCSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSF 535
Query: 541 AQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDG 600
QDLERACRDHYSKRCWGIG GLGFRVLSLSPSFR+LS++HIV YRKT+RRAIFLDYDG
Sbjct: 536 MQDLERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYDG 595
Query: 601 TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660
T+VPE+SI++ P EV+SVLK LC DPNNTVFIVSGRGR SLS WL+PCE LGIAAEHGY
Sbjct: 596 TLVPESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHGY 655
Query: 661 FIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFG 720
FIRW EWET + D EW+ +VEPVMRSY EATDG++IE KESALVWHHQDADPDFG
Sbjct: 656 FIRWKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFG 715
Query: 721 SCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVM 780
SCQAKE+LDHLESVLANEP VVKRGQHIVEVKPQGVSKGL AEKV+ M G PP+ VM
Sbjct: 716 SCQAKEMLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAAEKVIREMVERGEPPEMVM 775
Query: 781 CVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGLA 840
C+GDDRSDEDMFESILSTV+ P L V PE+FACTVGRKPSKAKY+LDD DVLKLL+GL
Sbjct: 776 CIGDDRSDEDMFESILSTVTNPELLVQPEVFACTVGRKPSKAKYFLDDEADVLKLLRGLG 835
Query: 841 TASSSKPRHLADIEVSFES 859
+SSS + +V+FES
Sbjct: 836 DSSSSLKPSSSHTQVAFES 854
|
|
| TAIR|locus:2129425 TPS5 "trehalose phosphatase/synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2949 (1043.2 bits), Expect = 2.3e-307, P = 2.3e-307
Identities = 548/846 (64%), Positives = 669/846 (79%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADG-YDSNDGDSDATSSGSRE 59
M SRS +N LDLASG + + PRV TV G++S+ D +SN SDA SS +++
Sbjct: 1 MVSRSYSNLLDLASGNFHSFSREKKRFPRVATVTGVLSELDDDNNSNSVCSDAPSSVTQD 60
Query: 60 RKIIVANMLPLHAKRDTETGRWCFSXXXXXXXXXXXXGFSSDTEVIYVGSLKADIDASEQ 119
R IIV N LP+ + R++ G+ FS G D EV+Y+G LK ID EQ
Sbjct: 61 RIIIVGNQLPIKSHRNS-AGKLSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTVEQ 119
Query: 120 EEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQA 179
++V+Q+LL++F CVP ++P +L K+Y GFCKQHLWPLFHYMLP+ PD G RFDR LWQA
Sbjct: 120 DDVSQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLWQA 179
Query: 180 YVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY 239
Y+S NKIFADKVMEVI+PDDD VWVHDYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSEIY
Sbjct: 180 YLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 239
Query: 240 RTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 299
RTLPVR+E+LR LLN DLIGFHTFDYARHFLSCCSRMLGL Y+SKRG IGL+Y+GRTV I
Sbjct: 240 RTLPVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTVSI 299
Query: 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQL 359
KILPVG+H+ +L+S+LNLP T TK+ E+ QF +K++LG+DDMDIFKGISLKLLAMEQL
Sbjct: 300 KILPVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAMEQL 359
Query: 360 LQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419
L QHP RG+VVLVQI NPARG GKDVQE + ET T KRINE++G P Y+PVVLID P+
Sbjct: 360 LTQHPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDTPL 419
Query: 420 PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS 479
FE+ AYY +AECC+V AVRDGMNL+PY+YI+CRQG P ++E +G + + SMLVVS
Sbjct: 420 QFFERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPSAAKKSMLVVS 479
Query: 480 EFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539
EFIGCSPSLSGAIRVNPW+IDAV +AM A+ + ++EKQ+RHEKH++YVSTHDVAYWARS
Sbjct: 480 EFIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWARS 539
Query: 540 FAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYD 599
F QDLERAC DH KRCWGIG GLGFRV++L PSF++LSI+HIVSAY++T+ RAI LDYD
Sbjct: 540 FIQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLDYD 599
Query: 600 GTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHG 659
GT+V SI +P E I +L L SDP N V++VSG+ R +L+EW + C+ LG+ AEHG
Sbjct: 600 GTMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAEHG 659
Query: 660 YFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDF 719
YFIR N ++WET+ L + EWK+I EPVMR YTE TDGS IE KE+ALVW++Q ADPDF
Sbjct: 660 YFIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADPDF 719
Query: 720 GSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFV 779
GSCQAKEL++HLESVL N+P VK GQ +VEVKPQGV+KGLVAE++L M G+ DF+
Sbjct: 720 GSCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQGVNKGLVAERLLTTMQEKGKLLDFI 779
Query: 780 MCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGL 839
+CVGDDRSDEDMFE I+S GP+L EIFACTVG+KPSKAKYYLDD +++++L GL
Sbjct: 780 LCVGDDRSDEDMFEVIMSAKDGPALSPVAEIFACTVGQKPSKAKYYLDDTAEIIRMLDGL 839
Query: 840 ATASSS 845
A +++
Sbjct: 840 AATNTT 845
|
|
| TAIR|locus:2200216 ATTPS6 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2839 (1004.4 bits), Expect = 1.1e-295, P = 1.1e-295
Identities = 541/855 (63%), Positives = 651/855 (76%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGD---SDATSSGS 57
M SRS +N L+LASG + R +PR+M V GI+S+ D DS D D D +
Sbjct: 1 MVSRSYSNLLELASGDSPTFGRMNRQIPRIMAVAGIMSNIDN-DSKDTDLSPKDRIIIVA 59
Query: 58 RERKIIVANMLPLHAKRDTETGR-----WCFSXXXXXXXXXXXXGFSSDT-EVIYVGSLK 111
E I + + + + W FS G + EVIYVG LK
Sbjct: 60 NELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVIYVGCLK 119
Query: 112 ADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDR 171
+I +EQEEV Q LL+ F CVPTFLP DL ++Y GFCKQ LWPLFHYMLP+ PD G R
Sbjct: 120 EEIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSPDLGGR 179
Query: 172 FDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHS 231
FDR LWQAYVS NKIFAD++MEVINP+DD VW+HDYHLMVLPTFLRKRFNR+KLGFFLHS
Sbjct: 180 FDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHS 239
Query: 232 PFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD 291
PFPSSEIY+TLP+R+E+LR LLN DLIGFHTFDYARHFLSCCSRMLGL YESKRG+IGL+
Sbjct: 240 PFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLE 299
Query: 292 YFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFD--GKKLILGIDDMDIFKGI 349
Y+GRTV IKILPVG+HMG+L+SVL+LP T K+ E+ +++ G+ ++LG+DDMDIFKGI
Sbjct: 300 YYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMDIFKGI 359
Query: 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409
+LKLLAMEQLL QHP +GKVVLVQI NPARG GKDV+E + ETY T KRINE +G P Y
Sbjct: 360 TLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETFGRPGY 419
Query: 410 EPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERD 469
+P+VLID P+ +E+ AYY VAECC+V AVRDGMNL+PY+YIV RQG +D+ L E +
Sbjct: 420 DPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKILKLEAN 479
Query: 470 SPHT-SMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV 528
+ + SMLVVSEFIGCSPSLSGAIRVNPW++DAVADAM A+ + + EKQLRHEKHY+YV
Sbjct: 480 NRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEKHYKYV 539
Query: 529 STHDVAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRK 588
STHDV YWARSF QDLER+C +H +RCWGIG GL FRV++L SFR+LS++HIVSAY++
Sbjct: 540 STHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIVSAYKR 599
Query: 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648
T+ RAI LDYD T++P+ SI K P + I +L TLC D N VFIVS + R +LS+W +P
Sbjct: 600 TKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLSDWFSP 659
Query: 649 CEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESAL 708
CE LGIAAEHGYF+R K EWE D WK+I EPVM YTE TDGS IE KE+AL
Sbjct: 660 CEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIEDKETAL 719
Query: 709 VWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVR 768
VW ++DADPDFGSCQAKELLDHLESVLANEP VKRGQ+ VEVKPQGVSKGL+A ++L
Sbjct: 720 VWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLIARRMLSM 779
Query: 769 MFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDD 828
M G P+FV+C+GDDRSDEDMFE I S+ GPS+ EIFACTVG+KPSKAKYYLDD
Sbjct: 780 MQERGTLPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSKAKYYLDD 839
Query: 829 ATDVLKLLQGLATAS 843
T++++L+ GLA+ +
Sbjct: 840 TTEIVRLMHGLASVT 854
|
|
| TAIR|locus:2202290 TPS7 "trehalose-phosphatase/synthase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2830 (1001.3 bits), Expect = 9.5e-295, P = 9.5e-295
Identities = 530/856 (61%), Positives = 655/856 (76%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGSRER 60
M SRS N LDLASG + + R LPRVMTVPG +S+ D + SD SS S +R
Sbjct: 1 MISRSYTNLLDLASGNFPVMGRERRRLPRVMTVPGNVSEFDEDQAYSVSSDNPSSVSSDR 60
Query: 61 KIIVANMLPLHAKRDTETGRWCFSXXXXXXXXXXXXGFSSDTEVIYVGSLKADIDASEQE 120
IIVAN LPL A++ G W FS G D E++YVGSL D+D++EQ+
Sbjct: 61 MIIVANRLPLKAEK--RNGSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNEQD 118
Query: 121 EVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAY 180
+VAQ LLD F CVPTF P DLQ KFY GFCK+ +WPLFHYMLP DHG RFDR LW+AY
Sbjct: 119 DVAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWEAY 178
Query: 181 VSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
V+ NK+F KV+EVINPDDD VW+HDYHLMVLPTFLR+RFNRI++GFFLHSPFPSSEIYR
Sbjct: 179 VATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEIYR 238
Query: 241 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 300
+LPVR+EIL+ LLN DLIGFHTFDYARHFL+CCSRMLGL+Y+SKRG+IGL+Y+GRTV IK
Sbjct: 239 SLPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVGIK 298
Query: 301 ILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLL 360
I+PVG++MGR++SV+ K+ E+ +F+GK ++LGIDDMDIFKGI+LKLLAMEQ+L
Sbjct: 299 IMPVGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQML 358
Query: 361 QQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420
+QHP RG+ VLVQIVNPARG G DV+E + E + +RIN +G P Y+P++ ID PV
Sbjct: 359 RQHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTPVS 418
Query: 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERD--SPHTSMLVV 478
E +AYY +AEC +V AVRDGMNL PY+YIVCRQG LG E D P SMLV
Sbjct: 419 INEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQGL------LGSESDFSGPKKSMLVA 472
Query: 479 SEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538
SEFIGCSPSLSGAIRVNPW+++A +A+ A++M D+EKQLRHEKH+RYVSTHDVAYW+R
Sbjct: 473 SEFIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWSR 532
Query: 539 SFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDY 598
SF QDLER C DH+ KRCWG+G+ GFRV++L P+FR+LSI IVS Y++ + RAI LDY
Sbjct: 533 SFLQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLDY 592
Query: 599 DGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEH 658
DGT++P+ SI K+P EV++ L LC D N++FIVSGRGR SLS+W PC+ +GIAAEH
Sbjct: 593 DGTLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAEH 652
Query: 659 GYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPD 718
GYF++W+ + EWET +D W +IVEPVM+ YTE+TDGS+IEIKESALVW ++DADP
Sbjct: 653 GYFLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADPG 712
Query: 719 FGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDF 778
FGS QAKE+L+HLESVLANEP VK G +IVEVKPQGVSKG V+EK+ M G+P DF
Sbjct: 713 FGSLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQGVSKGSVSEKIFSSMAGKGKPVDF 772
Query: 779 VMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQG 838
V+C+GDDRSDEDMFE+I + +S L +FACTVG+KPSKAKYYLDD T+V +L+
Sbjct: 773 VLCIGDDRSDEDMFEAIGNAMSKRLLCDNALVFACTVGQKPSKAKYYLDDTTEVTCMLES 832
Query: 839 LATASSSKPRHLADIE 854
LA AS + + +++
Sbjct: 833 LAEASEASNFSMRELD 848
|
|
| TAIR|locus:2054027 TPS11 "trehalose phosphatase/synthase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2745 (971.3 bits), Expect = 9.7e-286, P = 9.7e-286
Identities = 507/819 (61%), Positives = 630/819 (76%)
Query: 33 VPGIISDADGYDSNDGDSDATSSGSRERKIIVANMLPLHAKRDTETGRWCFSXXXXXXXX 92
+P ++ G +++D + A + + ++I+V+N LPL A RD + +WCF
Sbjct: 26 IPNAVTKLSGLETDDPNGGAWVT--KPKRIVVSNQLPLRAHRDISSNKWCFEFDNDSLYL 83
Query: 93 XXXXGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQ 152
GF +TEV+YVGSL AD+ SEQE+V+Q LL+ F CVPTFLP DL K+Y GFCK
Sbjct: 84 QLKDGFPPETEVVYVGSLNADVLPSEQEDVSQFLLEKFQCVPTFLPSDLLNKYYHGFCKH 143
Query: 153 HLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVL 212
+LWP+FHY+LPM G FDR W+AY + NKIFADK+ EV+NPDDD VW+HDYHLM+L
Sbjct: 144 YLWPIFHYLLPMTQAQGSLFDRSNWRAYTTVNKIFADKIFEVLNPDDDYVWIHDYHLMIL 203
Query: 213 PTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272
PTFLR RF+RIKLG FLHSPFPSSEIYRTLPVRDEIL+G LNCDL+GFHTFDYARHFLSC
Sbjct: 204 PTFLRNRFHRIKLGIFLHSPFPSSEIYRTLPVRDEILKGFLNCDLVGFHTFDYARHFLSC 263
Query: 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFD 332
CSRMLGLDYESKRG+IGL+YFGRTV IKILPVG+HMG++ES+ TA K+K + ++F
Sbjct: 264 CSRMLGLDYESKRGYIGLEYFGRTVSIKILPVGIHMGQIESIKASEKTAEKVKRLRERFK 323
Query: 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKE 392
G ++LG+DD+D+FKGISLK AM QLL+Q+ +RGKVVLVQI NPAR SGKDVQ+ +K+
Sbjct: 324 GNIVMLGVDDLDMFKGISLKFWAMGQLLEQNEELRGKVVLVQITNPARSSGKDVQDVEKQ 383
Query: 393 TYLTAKRINEVYGSPN-YEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYI 451
L A IN +G P Y+P+V I+ PV +K AYYA++EC +VNAVRDGMNLVPYKY
Sbjct: 384 INLIADEINSKFGRPGGYKPIVFINGPVSTLDKVAYYAISECVVVNAVRDGMNLVPYKYT 443
Query: 452 VCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAIN 511
V RQG+P +D ALG D S+++VSEFIGCSPSLSGAIRVNPW+IDAV +AM+ A+
Sbjct: 444 VTRQGSPALDAALGFGEDDVRKSVIIVSEFIGCSPSLSGAIRVNPWNIDAVTNAMSSAMT 503
Query: 512 MRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLS 571
M D EK LRH+KH++Y+S+H+VAYWARS+ QDL+RAC+DHY+KR WG+G GL F+V++L
Sbjct: 504 MSDKEKNLRHQKHHKYISSHNVAYWARSYDQDLQRACKDHYNKRFWGVGFGLFFKVVALD 563
Query: 572 PSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTV 631
P+FRRL + IV AYR++ R I LDYDGT++ + ++ K P ++IS+L LC DP+N V
Sbjct: 564 PNFRRLCGETIVPAYRRSSSRLILLDYDGTMMDQDTLDKRPSDDLISLLNRLCDDPSNLV 623
Query: 632 FIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRS 691
FIVSGRG+ LS+W C LGI+AEHGYF RWN S WET+ L ADL WKKI +PVM
Sbjct: 624 FIVSGRGKDPLSKWFDSCPNLGISAEHGYFTRWNSNSPWETSELPADLSWKKIAKPVMNH 683
Query: 692 YTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEV 751
Y EATDGS IE KESA+VWHHQ+AD FGS QAKELLDHLESVL NEP VVKRGQHIVEV
Sbjct: 684 YMEATDGSFIEEKESAMVWHHQEADHSFGSWQAKELLDHLESVLTNEPVVVKRGQHIVEV 743
Query: 752 KPQGVSKGLVAEKVLVRMFNG-GRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEI 810
KPQGVSKG V E ++ M N G+ PDF++C+GDDRSDEDMF+SI+ S+ + E+
Sbjct: 744 KPQGVSKGKVVEHLIATMRNTKGKRPDFLLCIGDDRSDEDMFDSIVKHQDVSSIGLE-EV 802
Query: 811 FACTVGRKPSKAKYYLDDATDVLKLLQGLATASSSKPRH 849
FACTVG+KPSKAKYYLDD V+K+L+ LA+AS +H
Sbjct: 803 FACTVGQKPSKAKYYLDDTPSVIKMLEWLASASDGS-KH 840
|
|
| DICTYBASE|DDB_G0284975 tpsB "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 705 (253.2 bits), Expect = 2.7e-124, Sum P(2) = 2.7e-124
Identities = 154/454 (33%), Positives = 250/454 (55%)
Query: 105 IYVGSLKADIDASEQEEVAQKLLDDFN--CVPTFL-PHDLQKKFYLGFCKQHLWPLFHYM 161
+++G +++ E E + + + +F+ FL P + +Y G+CK LW L HY
Sbjct: 97 LWIGWSHCEVNEDE-EPMLNQAIKEFSPHFEHVFLNPRQFEN-YYKGYCKNGLWLLLHYQ 154
Query: 162 LPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFN 221
+ R W+ YV N++FA+K+ V P D +W+HDYHLM++P LR+
Sbjct: 155 MNFI-----RMQSEWWEEYVGVNQMFAEKIASVWRPSD-IIWIHDYHLMLVPQMLRQLLP 208
Query: 222 -RIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLD 280
+GFF H+PFPS E++R LP R E+L+G+L+ +LIGF +F+Y RHF S C+R+L L+
Sbjct: 209 PEASIGFFFHAPFPSYELFRILPNRKELLKGILSSNLIGFQSFEYVRHFKSSCARLLDLE 268
Query: 281 YESKRGHIGLDYF--GRTVYIK--ILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKL 336
K GL+ F G T + K + P+GV LNLP +++++ + K F GKK+
Sbjct: 269 VHPK----GLEIFEDGSTHFTKLQVYPIGVDYNDFAKNLNLPEVSSRVESLRKIFKGKKV 324
Query: 337 ILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAK---KET 393
++ D +D +G+ KL EQLL HP GK+V +QI P G + E K K
Sbjct: 325 VVARDRLDQIEGVPRKLEVFEQLLNDHPEYIGKLVFIQIYEPTVEEGDETDEQKILHKTV 384
Query: 394 YLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVC 453
RIN +G ++ P+ I++ + E SA Y +A+ ++ +RDGMNL ++Y+VC
Sbjct: 385 NEMVGRINGKFGKLSFNPIEYINKKISYEELSALYKLADIALITPIRDGMNLTSHEYVVC 444
Query: 454 RQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMR 513
++D+ +L++SEF G + L G+I VNP+ + +A+ A+NM
Sbjct: 445 -------------QKDN--FGVLILSEFAGAARCLGGSIIVNPFSKKEIMEAIIEALNMS 489
Query: 514 DSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547
+++L+H+ +Y YV + ++W + F DL A
Sbjct: 490 MHDRKLKHQINYNYVLANTSSFWGKRFLCDLNEA 523
|
|
| ASPGD|ASPL0000037859 orlA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 558 (201.5 bits), Expect = 2.4e-105, Sum P(2) = 2.4e-105
Identities = 130/378 (34%), Positives = 215/378 (56%)
Query: 474 SMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDV 533
S L++SEF G + +LS AI +NPWD V++A+ A+ ++K+ +H K Y++V+T+ V
Sbjct: 552 SPLILSEFSGTAGALSSAIHINPWDTIGVSEAINKALTESVADKKEQHLKLYKHVTTNTV 611
Query: 534 AYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRA 593
+ W+ F + R + S F +P+ R + + YRK+ +R
Sbjct: 612 SAWSNQF---ISRLLANLSS-----------FDQSMATPALDRTKL---LKQYRKSRKRL 654
Query: 594 IFLDYDGTVVPETSIIKS--PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
DYDGT+ P +S P V+ LKTL +DP N V+I+SGR ++ L EW+
Sbjct: 655 FMFDYDGTLTPIVKDPQSAIPSDRVLRTLKTLAADPRNAVWIISGRDQAFLDEWMGHIPE 714
Query: 652 LGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWH 711
LG++AEHG FIR ++ W+ D+ W+K V + + +TE T GS IE K+ AL WH
Sbjct: 715 LGLSAEHGCFIRMPRSDNWQNLAETTDMGWQKEVMEIYQHFTERTQGSFIERKKVALTWH 774
Query: 712 HQDADPDFGSCQAKELLDHLESVLANEPAV-VKRGQHIVEVKPQGVSKGLVAEKVLVRMF 770
++ ADP++G+ QA+E LE ++ V V G+ +EV+P+ V+KG +A + LV+ +
Sbjct: 775 YRRADPEYGAFQARECRKQLEEHVSKTWDVEVMAGKANLEVRPRFVNKGFIATR-LVQAY 833
Query: 771 NGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR--KPSKAKYYLDD 828
G+ P+F++C GDD +DEDMF ++ LP ++ TVG K ++A ++L +
Sbjct: 834 EDGKVPEFILCSGDDFTDEDMFRALKKF----ELP-GDHVYTVTVGASSKQTEASWHLLE 888
Query: 829 ATDVLKLLQGLATASSSK 846
+DV++ + L ++S +
Sbjct: 889 PSDVIETITMLNNSASGQ 906
|
|
| TAIR|locus:2137712 TPS4 "trehalose-6-phosphatase synthase S4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 985 (351.8 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
Identities = 237/713 (33%), Positives = 386/713 (54%)
Query: 103 EVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYML 162
E ++G D+ + ++ L + C+P FL ++ ++Y G+C LWP+FHY L
Sbjct: 45 ETKWIGWPGVDVHDAIGKKTLSITLAEKGCIPVFL-EEVCDQYYNGYCNNILWPIFHY-L 102
Query: 163 PMCPDHGDRFDRVL-WQAYVSANKIFADKVMEVINP---DDDCVWVHDYHLMVLPTFLRK 218
P++ R D + +Q+ A K +V+ + D VW HDYH+M+LP +L++
Sbjct: 103 GTPPEY--RNDATITYQSQYEAYKKANQIFFDVVKEHYEEGDVVWCHDYHVMLLPQYLKE 160
Query: 219 RFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLG 278
+++K+G+FLH+PFPSSE+Y+TLP R ++LR +L DL+GFHT+D+ARHFL+ C +LG
Sbjct: 161 YNSKMKVGWFLHTPFPSSEMYKTLPSRSDLLRSVLTADLVGFHTYDFARHFLNACMCILG 220
Query: 279 LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLIL 338
++ S+ G+ G+ + + P+G+ R + L +K+ + F G+KLIL
Sbjct: 221 VEATSE----GIVDQGKVTRVAVFPIGIEPERFINTSELSEVVQYMKKFKNDFGGRKLIL 276
Query: 339 GIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAK 398
G+D +D KGI K A E+ L+++ RGKV+L+QI P R + Q+ K + +
Sbjct: 277 GVDRLDTIKGIPQKYQAFEKFLEENAEWRGKVMLLQIAVPTRNGIGEYQKIKDQCHYHVG 336
Query: 399 RINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458
RIN +GS + P++ +D + + A YA+ + +V ++RDGMNLV ++I C++
Sbjct: 337 RINGRFGSISSVPIIHLDCSIDFNQLCALYAITDVLLVTSLRDGMNLVSSEFIACQKA-- 394
Query: 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEK 517
E+ +L++SEF G SL +GAI VNPW+I V+ A+ A+NM EK
Sbjct: 395 --------EK-----GVLILSEFAGAGQSLGAGAILVNPWNIKEVSSAIGEALNMSHEEK 441
Query: 518 QLRHEKHYRYVSTHDVAYWARSFAQ-DLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRR 576
+ +H+ +++YV TH WA F + L + LG G P
Sbjct: 442 ERKHKINFQYVKTHSTQQWADDFMKLTLTNILCSKLIEITTSAELGAGLAATLELP---- 497
Query: 577 LSIDH-IVSAYRKTERRAIFLDYDGTVVPETSIIKSPG--------PEVISVLKTLCSDP 627
+H ++ Y K+ R + L + GT+ + G P++ LK LCSDP
Sbjct: 498 ---EHDVIQQYSKSNNRLLILGFYGTLTQPMKNQERRGDGMNLELHPQLKERLKELCSDP 554
Query: 628 NNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETN---HLGADLEWKKI 684
TV ++S + L + M +AAE+G F+R + + EW T H+ +LEW
Sbjct: 555 KTTVVVLSRSEKCILDKNFGEYNMW-LAAENGMFLR-HTSGEWVTRIPEHM--NLEWIDG 610
Query: 685 VEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHL-ESVLANEPAVVK 743
V+ V + +TE T GS +E E++LVW++++AD +FG QA+++L HL ++N V
Sbjct: 611 VKHVFKYFTERTPGSYLETSEASLVWNYENADAEFGRAQARDMLQHLWAGPISNASVDVV 670
Query: 744 RGQHIVEVKPQGVSKGLVAEKVLVRMFNG---GRPPDFVMCVGDDRS-DEDMF 792
RG VEV GV+KG E++L + + P D+V+C+G DED++
Sbjct: 671 RGGQSVEVHAVGVTKGSAMERILGEIVHNKSMATPIDYVLCIGCFLGKDEDVY 723
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| O80738 | TPS10_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.7694 | 0.9976 | 0.9976 | no | no |
| Q54K57 | TPSA_DICDI | 2, ., 4, ., 1, ., 1, 5 | 0.3494 | 0.8339 | 0.9795 | yes | no |
| Q9LRA7 | TPS9_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.7895 | 0.9976 | 0.9907 | yes | no |
| Q0WUI9 | TPS8_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.7753 | 0.9918 | 0.9976 | no | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 861 | |||
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 0.0 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 0.0 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 0.0 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 0.0 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 1e-176 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 1e-157 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 1e-140 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 1e-140 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 4e-92 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 2e-65 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 8e-61 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 6e-48 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 5e-26 | |
| TIGR01484 | 204 | TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, | 9e-20 | |
| PRK10187 | 266 | PRK10187, PRK10187, trehalose-6-phosphate phosphat | 2e-08 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 1e-07 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 4e-07 | |
| PLN02580 | 384 | PLN02580, PLN02580, trehalose-phosphatase | 2e-06 | |
| PLN02151 | 354 | PLN02151, PLN02151, trehalose-phosphatase | 3e-06 | |
| PLN03017 | 366 | PLN03017, PLN03017, trehalose-phosphatase | 3e-05 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 6e-05 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 4e-04 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 1272 bits (3292), Expect = 0.0
Identities = 574/848 (67%), Positives = 682/848 (80%), Gaps = 5/848 (0%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGS-RE 59
M SRS +N L+LASG + R +PR+MTV GI+SD D S SD +SS ++
Sbjct: 1 MVSRSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKD 60
Query: 60 RKIIVANMLPLHAKRDTE-TGRWCFSLDEDLLLLHLKDGFSSDT-EVIYVGSLKADIDAS 117
R IIVAN LP+ A+R ++ + W FS DE+ LLL LKDG D EVIYVG LK +I +
Sbjct: 61 RIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLN 120
Query: 118 EQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLW 177
EQEEV+Q LL+ F CVPTFLP DL ++Y GFCKQ LWPLFHYMLP+ PD G RF+R LW
Sbjct: 121 EQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
Query: 178 QAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE 237
QAYVS NKIFAD++MEVINP+DD VW+HDYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSE
Sbjct: 181 QAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
Query: 238 IYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV 297
IY+TLP+R+E+LR LLN DLIGFHTFDYARHFLSCCSRMLGL YESKRG+IGL+Y+GRTV
Sbjct: 241 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTV 300
Query: 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMDIFKGISLKLLA 355
IKILPVG+HMG+L+SVL+LP T K+KE+ KQF + ++LG+DDMDIFKGISLKLLA
Sbjct: 301 SIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLA 360
Query: 356 MEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLI 415
MEQLL QHP +GKVVLVQI NPARG GKDV+E + ET+ T KRINE +G P Y+P+VLI
Sbjct: 361 MEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLI 420
Query: 416 DRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSM 475
D P+ +E+ AYY VAECC+V AVRDGMNL+PY+YI+ RQG +D+ LG E +P SM
Sbjct: 421 DAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSM 480
Query: 476 LVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAY 535
LVVSEFIGCSPSLSGAIRVNPW+IDAVADAM A+ M + EKQLRHEKHYRYVSTHDV Y
Sbjct: 481 LVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGY 540
Query: 536 WARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIF 595
WARSF QDLER CRDH +RCWGIG GL FRV++L P+FR+LS++HIVSAY++T RAI
Sbjct: 541 WARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAIL 600
Query: 596 LDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIA 655
LDYDGT++P+ SI KSP + I +L TLC D NN VFIVS R R +L++W +PCE LGIA
Sbjct: 601 LDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIA 660
Query: 656 AEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDA 715
AEHGYF+R + EWET AD WK+I EPVM+ YTE TDGS IE KE+ALVW ++DA
Sbjct: 661 AEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDA 720
Query: 716 DPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRP 775
DPDFGSCQAKELLDHLESVLANEP VK GQ+IVEVKPQGVSKGLVA+++L M G
Sbjct: 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGML 780
Query: 776 PDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKL 835
PDFV+C+GDDRSDEDMFE I S+++GPS+ E+FACTVG+KPSKAKYYLDD ++++L
Sbjct: 781 PDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRL 840
Query: 836 LQGLATAS 843
+QGLA+ S
Sbjct: 841 MQGLASVS 848
|
Length = 854 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 687 bits (1776), Expect = 0.0
Identities = 236/492 (47%), Positives = 317/492 (64%), Gaps = 26/492 (5%)
Query: 59 ERKIIVANMLPLHAKRDTETGRWCFSLDED-LLLLHLKDGFSSDTEVIYVGSLKADIDAS 117
R ++V+N LP+ AKR E G+W FS+ L+ +G S TE ++VG +D
Sbjct: 1 SRLVVVSNRLPVTAKR-EEEGKWEFSIKMSSGGLVSALNGLSEATEGVWVGWPGVPVDED 59
Query: 118 E-QEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVL 176
E ++ V+Q L + F CVP FL + ++Y GF LWPLFHY LP + D FDR
Sbjct: 60 EPKDRVSQLLKEKFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLPPN--NEDEFDRSW 117
Query: 177 WQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS 236
W AYV NK+FADK++EV D +WVHDYHLM+LP LRKR K+GFFLH PFPSS
Sbjct: 118 WDAYVKVNKLFADKIVEVYKDGD-LIWVHDYHLMLLPQMLRKRLPDAKIGFFLHIPFPSS 176
Query: 237 EIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRT 296
EI+R LPVR+EILRGLL DLIGFHT+DYARHFLSCCSR+LGL+ S G++Y GRT
Sbjct: 177 EIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLETTSDG---GVEYGGRT 233
Query: 297 VYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDIFKGISLKLLA 355
V + P+G+ GR+ES L P+ K+KE++++F + KKLILG+D +D KGI KLLA
Sbjct: 234 VSVGAFPIGIDPGRIESGLKSPSVQEKVKELKERFGNKKKLILGVDRLDYIKGIPQKLLA 293
Query: 356 MEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLI 415
E+ L+++P RGKVVLVQI P+RG ++ Q + + RIN +G+ +Y PV +
Sbjct: 294 FERFLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHHL 353
Query: 416 DRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSM 475
R + E A YA+A+ C+V ++RDGMNLV Y+Y+ C+Q +
Sbjct: 354 HRSLDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQQDRK---------------GV 398
Query: 476 LVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVA 534
L++SEF G + SL GAI VNPWDI+ VA+A+ A+ M + E+Q RH K ++Y+S HDV
Sbjct: 399 LILSEFAGAAQSLNDGAILVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKYISKHDVQ 458
Query: 535 YWARSFAQDLER 546
YWA SF DL+R
Sbjct: 459 YWAESFLSDLKR 470
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 618 bits (1597), Expect = 0.0
Identities = 273/785 (34%), Positives = 402/785 (51%), Gaps = 66/785 (8%)
Query: 60 RKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVG--SLKADIDAS 117
R IIV+N LP+ R E G + L L+ F ++VG L + ++
Sbjct: 2 RLIIVSNRLPVTVVR--EDGGVELTPSVGGLATGLR-SFHERGGGLWVGWPGLDLEEESE 58
Query: 118 EQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLW 177
EQ + L++ VP FL + ++Y GFC LWPLFHY F+ W
Sbjct: 59 EQRARIEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTE-----FEDRFW 113
Query: 178 QAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE 237
++Y N+ FA+ + + P D VWVHDY LM+LP LR+R ++GFFLH PFPS E
Sbjct: 114 ESYERVNQRFAEAIAAIARPGD-VVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFE 172
Query: 238 IYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV 297
++R LP R+EIL GLL DLIGFHT+DY RHFLS R+LG + E +G GR V
Sbjct: 173 VFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLG----GRIV 228
Query: 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAME 357
+ P+G+ + + P +I+ + + G+K+IL ID +D KGI +LLA E
Sbjct: 229 RVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFE 288
Query: 358 QLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDR 417
+ L+++P RGKV LVQ+ P+R QE K+E RIN +G+ ++ P+ R
Sbjct: 289 RFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYR 348
Query: 418 PVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLV 477
+P E A Y A+ +V +RDGMNLV +Y+ R +L+
Sbjct: 349 SLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTD---------------GDGVLI 393
Query: 478 VSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWA 537
+SE G + L+ A+ VNP DI+ +A A+ A+ M + E++ R + + +DV WA
Sbjct: 394 LSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWA 453
Query: 538 RSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLD 597
F +L A + + S + + I++ YR RR + LD
Sbjct: 454 SDFLDELREAAEKNKAFA---------------SKPITPAAAEEIIARYRAASRRLLLLD 498
Query: 598 YDGTVVP--ETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIA 655
YDGT+VP + P E+ +L+ L +DPN V I+SGR R +L W + +
Sbjct: 499 YDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPI-HLV 557
Query: 656 AEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDA 715
AEHG + R EW+ EWK V P++ + + T GS IE KE++L WH+++A
Sbjct: 558 AEHGAWSRAPGG-EWQLLE-PVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNA 615
Query: 716 DPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRP 775
DP+ G +A EL+ L S+L+N P V RG +VEV+P GV+KG ++L P
Sbjct: 616 DPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAG-----P 670
Query: 776 PDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKL 835
DFV+ +GDD +DEDMF + +P VG S+A+Y L +V +L
Sbjct: 671 YDFVLAIGDDTTDEDMFRA-----------LPETAITVKVGPGESRARYRLPSQREVREL 719
Query: 836 LQGLA 840
L+ L
Sbjct: 720 LRRLL 724
|
Length = 726 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 584 bits (1507), Expect = 0.0
Identities = 202/484 (41%), Positives = 284/484 (58%), Gaps = 26/484 (5%)
Query: 62 IIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEE 121
++V+N LP+ +RD + + L G T ++VG + D E++E
Sbjct: 3 VVVSNRLPVSIERDGDG--EFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDE 60
Query: 122 VAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYV 181
V+ +LL ++ P FL + + +Y GF + LWPLFHY L + RFDR W+AYV
Sbjct: 61 VSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLA-----RFDREDWEAYV 115
Query: 182 SANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRT 241
N+ FAD + EV+ P D VWVHDYHL++LP LR+R ++GFFLH PFPSSEI+R
Sbjct: 116 RVNRKFADAIAEVLRPGD-LVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFRC 174
Query: 242 LPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKI 301
LP R+E+LRGLL DLIGF T YAR+FLSCCSR+LGL+ G++Y GR V +
Sbjct: 175 LPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTD---DGGVEYGGRRVRVGA 231
Query: 302 LPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQ 361
P+G+ + P + E+ ++ G+KLI+G+D +D KGI +LLA E+LL+
Sbjct: 232 FPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLE 291
Query: 362 QHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPR 421
++P RGKVVLVQI P+R + QE ++E RIN +G+ ++ PV + R +PR
Sbjct: 292 RYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPR 351
Query: 422 FEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF 481
E +A Y A+ +V +RDGMNLV +Y+ C+ P +L++SEF
Sbjct: 352 EELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDP---------------GVLILSEF 396
Query: 482 IGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFA 541
G + LSGA+ VNP+DID VADA+ A+ M E++ RH K YV THDV WA SF
Sbjct: 397 AGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFL 456
Query: 542 QDLE 545
DL
Sbjct: 457 DDLA 460
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 528 bits (1361), Expect = e-176
Identities = 292/825 (35%), Positives = 443/825 (53%), Gaps = 78/825 (9%)
Query: 56 GSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADID 115
G R R ++VAN LP+ AKR T W + L+ L +T+ ++G D+
Sbjct: 8 GERPRLLVVANRLPVSAKR-TGEDSWSLEMSPGGLVSALLGVKEFETK--WIGWPGVDVH 64
Query: 116 ASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYM-LPMCPDH-GDRFD 173
+ + L + C+P FL +++ ++Y G+C LWP+FHYM LP H R
Sbjct: 65 DEIGKAALTESLAEKGCIPVFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTF 123
Query: 174 RVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPF 233
+ AY AN++F D V E + D VW HDYHLM LP +L++ N++K+G+FLH+PF
Sbjct: 124 ESQYDAYKKANRMFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPF 182
Query: 234 PSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYF 293
PSSEIY+TLP R E+LR +L DLIGFHT+D+ARHFLS C+R+LG++ H G+
Sbjct: 183 PSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGT----HEGVVDQ 238
Query: 294 GRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKL 353
G+ + + P+G+ R + LP +KE+++ F G+K+ILG+D +D+ KGI K
Sbjct: 239 GKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKY 298
Query: 354 LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVV 413
LA E+ L+++P R KV+LVQI P R + Q+ K + + RIN +GS + P+
Sbjct: 299 LAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIH 358
Query: 414 LIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHT 473
+D V A YA+ + +V ++RDGMNLV Y+++ C++
Sbjct: 359 HLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAK---------------K 403
Query: 474 SMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHD 532
+LV+SEF G SL +GA+ VNPW+I V+ A+ A+NM D E++ RH +++YV TH
Sbjct: 404 GVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHS 463
Query: 533 VAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERR 592
WA F +L I + R ++ L ++ Y K+ R
Sbjct: 464 AQKWADDFMSELN------------DIIVEAELRTRNIPLE---LPEQDVIQQYSKSNNR 508
Query: 593 AIFLDYDGTVV-PETSIIKSP----GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647
+ L + GT+ P S IK PE+ LK LCSDP TV ++S G+ L +
Sbjct: 509 LLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFG 568
Query: 648 PCEMLGIAAEHGYFIRWNKTSEWETN---HLGADLEWKKIVEPVMRSYTEATDGSNIEIK 704
+ +AAE+G F+R + + EW T H+ +L+W V+ V + +T+ T S +E
Sbjct: 569 EYNIW-LAAENGMFLR-HTSGEWVTTMPEHM--NLDWVDGVKNVFKYFTDRTPRSYVEKS 624
Query: 705 ESALVWHHQDADPDFGSCQAKELLDHL-ESVLANEPAVVKRGQHIVEVKPQGVSKGLVAE 763
E++LVW+++ AD +FG QA+++L HL ++N V RGQ VEV GV+KG
Sbjct: 625 ETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIG 684
Query: 764 KVL---VRMFNGGRPPDFVMCVGDDRS-DEDM---FES-ILST--------------VSG 801
++L V + P DFV C G DED+ FE ILS VS
Sbjct: 685 RILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSS 744
Query: 802 PSLPVPPE-IFACTVGRKPSKAKYYLDDATDVLKLLQGLATASSS 845
+ + E F+C +G+ +KA+Y LD + DV+ LL LA A+++
Sbjct: 745 NLVDLKGENYFSCAIGQARTKARYVLDSSNDVVSLLHKLAVANTT 789
|
Length = 797 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 484 bits (1248), Expect = e-157
Identities = 277/795 (34%), Positives = 428/795 (53%), Gaps = 109/795 (13%)
Query: 41 DGYDSNDGDSDATSSGSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLL---LLHLKDG 97
DG + +G R+R ++VAN LP+ A R E W + L LL +K+
Sbjct: 81 DGCERQEGRRPL-----RQRLLVVANRLPVSAVRRGE-DSWSLEISAGGLVSALLGVKE- 133
Query: 98 FSSDTEVIYVGSLKADIDASEQEEVAQ----KLLDDFNCVPTFLPHDLQKKFYLGFCKQH 153
E ++G ++ +EV Q K L + C+P FL ++ ++Y G+C
Sbjct: 134 ----FEARWIGWAGVNV----PDEVGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNI 185
Query: 154 LWPLFHYM-LPMCPDHGDRF--DRVL---WQAYVSANKIFADKVMEVINPDDDCVWVHDY 207
LWPLFHY+ LP DR R + AY AN++FAD V E + D VW HDY
Sbjct: 186 LWPLFHYLGLP----QEDRLATTRSFQSQFAAYKKANQMFADVVNEHYE-EGDVVWCHDY 240
Query: 208 HLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYAR 267
HLM LP L++ + +K+G+FLH+PFPSSEI+RTLP R E+LR +L DL+GFHT+DYAR
Sbjct: 241 HLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYAR 300
Query: 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEI 327
HF+S C+R+LGL+ + G++ GR + P+G+ R L P IKE+
Sbjct: 301 HFVSACTRILGLEGTPE----GVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKEL 356
Query: 328 EKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQ 387
+++F G+K++LG+D +D+ KGI K+LA E+ L+++P R KVVL+QI P R DV
Sbjct: 357 KERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTR---TDVP 413
Query: 388 EAKKETYLTAK------RINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRD 441
E +K LT++ RIN +G+ P+ +DR + A YAV + +V ++RD
Sbjct: 414 EYQK---LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRD 470
Query: 442 GMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDID 500
GMNLV Y+++ C+ +L++SEF G + SL +GAI VNPW+I
Sbjct: 471 GMNLVSYEFVACQ---------------DSKKGVLILSEFAGAAQSLGAGAILVNPWNIT 515
Query: 501 AVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDHYSKRCWGIG 560
VA ++ A+NM + E++ RH ++ +V+TH WA +F +L
Sbjct: 516 EVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTV------------ 563
Query: 561 LGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPG------- 613
+ R + P +L + + Y ++ R + L ++ T+ T + +PG
Sbjct: 564 VEAQLRTRQVPP---QLPPEDAIQRYLQSNNRLLILGFNATL---TEPVDTPGRRGDQIK 617
Query: 614 -------PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNK 666
PE+ L+ LCSDP T+ ++SG RS L E +M +AAE+G F+R K
Sbjct: 618 EMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDMW-LAAENGMFLRHTK 676
Query: 667 TSEWETN---HLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQ 723
EW T HL +++W V+ V +TE T S+ E +E++LVW+++ AD +FG Q
Sbjct: 677 -GEWMTTMPEHL--NMDWVDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQ 733
Query: 724 AKELLDHLESVLANEPAV-VKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGG---RPPDFV 779
A+++L HL + + AV V +G VEV+P GV+KG +++L + + P D+V
Sbjct: 734 ARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYV 793
Query: 780 MCVGDDRS-DEDMFE 793
+C+G DED++
Sbjct: 794 LCIGHFLGKDEDIYT 808
|
Length = 934 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 424 bits (1093), Expect = e-140
Identities = 187/505 (37%), Positives = 272/505 (53%), Gaps = 26/505 (5%)
Query: 44 DSNDGDSDATSSGSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTE 103
+ + A+ R I+V+N LP+ + + G L+ LK
Sbjct: 1 STEEQPITASPLEDS-RLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALK-PLLRVDG 58
Query: 104 VIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLP 163
++G E + ++ + +F P L + + +Y GF LWPLFHY +
Sbjct: 59 GTWIGWSGTTGPTDESSDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFID 118
Query: 164 MCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRI 223
++R W AYV N+ FADK++E+ P D +WVHDYHL+++P LR+R
Sbjct: 119 D-----VAYERNWWDAYVKVNRKFADKIVEIYEPGD-IIWVHDYHLLLVPQMLRERIPDA 172
Query: 224 KLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYES 283
K+GFFLH PFPSSE++R LP R+EIL GLL DLIGF T YAR+FL CSR+LG+ ++
Sbjct: 173 KIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDA 232
Query: 284 KRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDG-KKLILGIDD 342
G D GR V + P+G+ E L P+ K+ E++ + KKLI+G+D
Sbjct: 233 DIRFNGAD--GRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDR 290
Query: 343 MDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINE 402
+D KGI +LLA E+LL+++P RGKVVL+QI P+R ++ Q + + RIN
Sbjct: 291 LDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRING 350
Query: 403 VYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDE 462
+GS ++ PV + R + R E A Y A+ +V +RDGMNLV +Y+ ++ P
Sbjct: 351 EFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKP---- 406
Query: 463 ALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHE 522
+L++SEF G + L A+ VNPWD VADA+ A+ M E++ RHE
Sbjct: 407 -----------GVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHE 455
Query: 523 KHYRYVSTHDVAYWARSFAQDLERA 547
K + V THDVA WA SF DL +A
Sbjct: 456 KLLKQVLTHDVARWANSFLDDLAQA 480
|
Length = 486 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 423 bits (1090), Expect = e-140
Identities = 182/492 (36%), Positives = 264/492 (53%), Gaps = 41/492 (8%)
Query: 60 RKIIVANMLPLHAKRDTET----GRWCFSLDEDLLLLHLKDGFSSDTEVIYVG-SLKADI 114
R I+V+N LP+ R G L + L G T ++ G S K
Sbjct: 1 RLIVVSNRLPVPITRGGLEPSAGG----------LAVALL-GALKATGGVWFGWSGKTVE 49
Query: 115 DASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDR 174
+ + + +L P FL + +Y GF LWPLFHY + R+DR
Sbjct: 50 EDEGEPFLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDR 104
Query: 175 VLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFP 234
W+AY N++FA+ + ++ P D VWVHDYHLM+LP LR+ + K+GFFLH PFP
Sbjct: 105 KAWEAYRRVNRLFAEALAPLLQPGD-IVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFP 163
Query: 235 SSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFG 294
SSEIYRTLP R E+L GLL DL+GF T+D AR+FLS SR LGL+ G++ G
Sbjct: 164 SSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGG 219
Query: 295 RTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLL 354
RTV + P+G+ + R P+ +I E+ + G+KLI+G+D +D KG+ +LL
Sbjct: 220 RTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLL 279
Query: 355 AMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVL 414
A E+ L++HP RGKVVLVQI P+RG + Q+ +++ RIN +G+ ++ P+
Sbjct: 280 AFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRY 339
Query: 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTS 474
++R R E A Y A+ +V +RDGMNLV +Y+ + P
Sbjct: 340 LNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD---------------PKDG 384
Query: 475 MLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVA 534
+L++SEF G + L+GA+ VNP+DID +ADA+ A+ M E++ RH + +DV
Sbjct: 385 VLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQ 444
Query: 535 YWARSFAQDLER 546
W F DL
Sbjct: 445 RWREDFLSDLNS 456
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 289 bits (742), Expect = 4e-92
Identities = 116/238 (48%), Positives = 151/238 (63%), Gaps = 7/238 (2%)
Query: 595 FLDYDGTVVP--ETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML 652
FLDYDGT+ P E P ++S+L L SDP NTV I+SGR R+ + L
Sbjct: 1 FLDYDGTLSPIVEDPDAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFE-DLFFGVPNL 59
Query: 653 GIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHH 712
G+AAEHG FIR +W DL+WKK V ++ YTE T GS IE K+SAL WH+
Sbjct: 60 GLAAEHGAFIRDPGGEDWTNLAEVEDLDWKKEVAAILEEYTERTPGSYIEDKKSALAWHY 119
Query: 713 QDADPDFGSCQAKELLDHLESVLANEPAV-VKRGQHIVEVKPQGVSKGLVAEKVLVRMFN 771
++AD DFG QAKEL +HLESVL + P V V +G+ +VEV+P GVSKG AE++L + +
Sbjct: 120 RNADDDFGVFQAKELAEHLESVLKDYPDVRVTQGKKVVEVRPVGVSKGKAAERLLEELGS 179
Query: 772 GGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDA 829
G PPDF +C+GDDR+DEDMF+ + T + E+ A +VG KPS AKY+LDD
Sbjct: 180 AGSPPDFPLCIGDDRTDEDMFDVVNPTKMS---GLSIEVGATSVGSKPSSAKYFLDDP 234
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 227 bits (579), Expect = 2e-65
Identities = 124/415 (29%), Positives = 197/415 (47%), Gaps = 38/415 (9%)
Query: 143 KKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCV 202
FY K+ WP+ H P+ F WQ ++ N+ FA+ + V
Sbjct: 83 DIFYHITSKEAFWPILHTF----PERFQ-FREDDWQVFLKVNRAFAEAACLEAA-EGATV 136
Query: 203 WVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHT 262
WVHDY+L ++P ++R+ +K+ FF H+PFPS++++ LP R++I+ LL CD IGFH
Sbjct: 137 WVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHI 196
Query: 263 FDYARHFLSCCSRMLGLDYESK-----------------RGHIGLDYFGRTVYIKILPVG 305
Y +F+ ++ L S+ R LD R V + PVG
Sbjct: 197 PRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVG 256
Query: 306 VHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPG 365
R+ S L + ++ I + G KLIL + +D KGI KL A E+LL++ P
Sbjct: 257 TDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERRPE 316
Query: 366 MRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425
+ GKV LV PA E + + RIN + + P+ R +P E S
Sbjct: 317 LLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVS 376
Query: 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485
A++A+A+ + +RDG+NLV +Y+ + D +LV+SEF G +
Sbjct: 377 AWFAMADVMWITPLRDGLNLVAKEYVAAQ-----------GLLD----GVLVLSEFAGAA 421
Query: 486 PSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSF 540
L GA+ NP+D + + + +A+ M +E+Q R + + V+ +DV WA F
Sbjct: 422 VELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEF 476
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 213 bits (544), Expect = 8e-61
Identities = 125/410 (30%), Positives = 208/410 (50%), Gaps = 31/410 (7%)
Query: 139 HDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPD 198
+D +Y F LWP FHY L + +F R W+ Y+ N + ADK++ ++ D
Sbjct: 73 YDE---YYNQFSNAVLWPAFHYRLDLV-----QFQRPAWEGYLRVNALLADKLLPLLKDD 124
Query: 199 DDCVWVHDYHLMVLPTFLRKR--FNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCD 256
D +W+HDYHL+ + LRKR NRI GFFLH PFP+ EI+ LP DE+L L + D
Sbjct: 125 D-IIWIHDYHLLPFASELRKRGVNNRI--GFFLHIPFPTPEIFNALPPHDELLEQLCDYD 181
Query: 257 LIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLN 316
L+GF T + FL C S + + S + H +G+ ++ P+G+ +
Sbjct: 182 LLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTA---WGKAFRTEVYPIGIEPDEIAKQAA 238
Query: 317 LPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIV 376
P K+ +++ + + I ++ +D KG+ + LA E LL+++P GK+ QI
Sbjct: 239 GPLPP-KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIA 297
Query: 377 NPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIV 436
+RG + Q+ + + A RIN YG + P+ +++ R + ++ +V
Sbjct: 298 PTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLV 357
Query: 437 NAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNP 496
+RDGMNLV +Y+ +D + +LV+S+F G + L+ A+ VNP
Sbjct: 358 TPLRDGMNLVAKEYVAA--------------QDPANPGVLVLSQFAGAANELTSALIVNP 403
Query: 497 WDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546
+D D VA A+ A+ M +E+ RH + + +D+ +W F DL++
Sbjct: 404 YDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQ 453
|
Length = 474 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 171 bits (434), Expect = 6e-48
Identities = 81/272 (29%), Positives = 124/272 (45%), Gaps = 25/272 (9%)
Query: 576 RLSIDHIVSAYRKTERRAIFLDYDGTVVP--ETSIIKSPGPEVISVLKTLCSDPNNTVFI 633
L + ++ Y +R +FLDYDGT+ P ++S+L+ L SDP N V I
Sbjct: 3 ALQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAI 62
Query: 634 VSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYT 693
+SGR + L +G+ AEHG +R W ADL W K V ++ Y
Sbjct: 63 ISGRSLAELERLFGVPG-IGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYV 121
Query: 694 EATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKP 753
E T GS IE K A+ H+++A+ D G+ A L + L V G+ +VE++P
Sbjct: 122 ERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLR---VTPGKMVVELRP 178
Query: 754 QGVSKGLVAEKVLVRMFNGGRPP---DFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEI 810
GVSKG + ++ P F + GDD +DED F + ++ + ++
Sbjct: 179 PGVSKGAAIKYIM------DELPFDGRFPIFAGDDLTDEDAFAA-VNKLDSITVK----- 226
Query: 811 FACTVGRKPSKAKYYLDDATDVLKLLQGLATA 842
VG ++AK+ L L+ L L A
Sbjct: 227 ----VGVGSTQAKFRLAGVYGFLRSLYKLLEA 254
|
Length = 266 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 5e-26
Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 29/261 (11%)
Query: 591 RRAIFLDYDGTVVPETSIIKSP-----GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEW 645
+RA F DYDGT+ I+ P ++++L+ L + P+N ++I+SGR L +W
Sbjct: 3 KRAFFFDYDGTLSE---IVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGR--KFLEKW 57
Query: 646 -LAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIK 704
LG+A EHG ++ N + + N WK + T G IE K
Sbjct: 58 LGVKLPGLGLAGEHGCEMKDNGSCQDWVNLTEKIPSWKVRANELREEITT-RPGVFIERK 116
Query: 705 ESALVWHHQDA-DPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAE 763
AL WH++ A P+ +AKEL E +L+ V G+ +VE+KP+ V+KG + +
Sbjct: 117 GVALAWHYRQAPVPELARFRAKELK---EKILSFTDLEVMDGKAVVELKPRFVNKGEIVK 173
Query: 764 KVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVS---GPSLPVPPEIFACTVGRKPS 820
++L G P + +GDD +DED F + + +P+ G K +
Sbjct: 174 RLLWHQPGSGISP---VYLGDDITDEDAFRVVNNQWGNYGFYPVPIGS-------GSKKT 223
Query: 821 KAKYYLDDATDVLKLLQGLAT 841
AK++L VL+ L L
Sbjct: 224 VAKFHLTGPQQVLEFLGLLVG 244
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|233434 TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Score = 88.2 bits (219), Expect = 9e-20
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML 652
+F D DGT++ + SP E I L+ L V +V+GR + + E L L
Sbjct: 1 LLFFDLDGTLLDPNAHELSP--ETIEALERLREA-GVKVVLVTGRSLAEIKELLKQLP-L 56
Query: 653 GIAAEHGYFIRWNKTSEWETNHLGAD--LEWKKIVEPVMRSYTEATDGSNIEIKESALVW 710
+ AE+G I + + + L K+ + ++S +E G+ IE K A+
Sbjct: 57 PLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAI 116
Query: 711 HHQDADPDFGSCQAKELLDHLESVLANEPAVVKR--GQHIVEVKPQGVSKGLVAEKVLVR 768
H+ A+ ++ + LE + N+ + G+ +EV P GV KG A + L++
Sbjct: 117 HYVGAELGQEL--DSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKG-SALQALLK 173
Query: 769 MFNGGRPPDFVMCVGDDRSDEDMFE 793
NG D ++ GD +DE+MFE
Sbjct: 174 ELNG--KRDEILAFGDSGNDEEMFE 196
|
This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class II subfamilies are characterized by a domain that is located between the second and third conserved catalytic motifs of the superfamily domain. The IIB subfamily is distinguished from the IIA subfamily (TIGR01460) by homology and the predicted secondary structure of this domain by PSI-PRED. The IIB subfamily's Class II domain has the following predicted structure: Helix-Sheet-Sheet-(Helix or Sheet)-Helix-Sheet-(variable)-Helix-Sheet-Sheet. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing OMNI|TC0379 and OMNI|SA2196 whose relationship to the other groups is unclear [Unknown function, Enzymes of unknown specificity]. Length = 204 |
| >gnl|CDD|182291 PRK10187, PRK10187, trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 2e-08
Identities = 66/276 (23%), Positives = 115/276 (41%), Gaps = 49/276 (17%)
Query: 589 TERRAIFLDYDGTVVPETSIIKSPGPE--VI--SVLKTLC--SDPNN-TVFIVSGRGRSS 641
+ A F D DGT+ IK P P+ V+ ++L+ L + N+ + ++SGR
Sbjct: 12 SANYAWFFDLDGTLAE----IK-PHPDQVVVPDNILQGLQLLATANDGALALISGRSMVE 66
Query: 642 LSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNI 701
L P +A HG R + + HL + + + + + G+ +
Sbjct: 67 LDALAKPYR-FPLAGVHGA-ERRDINGKTHIVHLPDAIA--RDISVQLHTALAQLPGAEL 122
Query: 702 EIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKR--------GQHIVEVKP 753
E K A H++ QA + H +++LA + + G+ +VE+KP
Sbjct: 123 EAKGMAFALHYR---------QAPQ---HEDALLALAQRITQIWPQLALQPGKCVVEIKP 170
Query: 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFAC 813
+G +KG + GR P F VGDD +DE F ++++ + G S+
Sbjct: 171 RGTNKGEAIAAFMQEAPFAGRTPVF---VGDDLTDEAGF-AVVNRLGGISV--------- 217
Query: 814 TVGRKPSKAKYYLDDATDVLKLLQGLATASSSKPRH 849
VG ++A + L DV L+ + TA K +
Sbjct: 218 KVGTGATQASWRLAGVPDVWSWLEMITTAQQQKREN 253
|
Length = 266 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 54.2 bits (129), Expect = 1e-07
Identities = 61/399 (15%), Positives = 124/399 (31%), Gaps = 61/399 (15%)
Query: 157 LFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFL 216
+ L R V + + +++ ++ +H + L++ P L
Sbjct: 40 IAPEKLEGLGIEVLRLPSVSLPLLIVRLRPALLRLLLLLKRLLPYDIIHAHSLLLAPGGL 99
Query: 217 ----RKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272
+ I L LH P + L + G R +
Sbjct: 100 LALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLL------------GLLRLLLKRLKKAL 147
Query: 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFD 332
+ S L+ G I ++P G+ + +
Sbjct: 148 RLLADRVIAVSPALKELLEALGVPNKIVVIPNGIDTEKFA----------PARIGLLPEG 197
Query: 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKE 392
GK ++L + +D KG+ L + A +L ++ P ++ +V G G + +E
Sbjct: 198 GKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIV---------GDGPERRE---- 244
Query: 393 TYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIV 452
+ ++ E V VP E + A A+ ++ ++ +G LV + +
Sbjct: 245 ------ELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMA 298
Query: 453 CRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINM 512
GTP++ D +V G + V P D++ +ADA+ +
Sbjct: 299 A--GTPVIA------SDVGGIPEVVEDGETG--------LLVPPGDVEELADALEQLLED 342
Query: 513 RDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDH 551
+ ++L R A + E +
Sbjct: 343 PELREELGEAARERVEEEFSWERIAEQLLELYEELLAEK 381
|
Length = 381 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 4e-07
Identities = 38/228 (16%), Positives = 72/228 (31%), Gaps = 31/228 (13%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
+ + D DGT++ I PE L L + V + +GR + L +
Sbjct: 4 KLLAFDLDGTLLDSNKTI---SPETKEALARL-REKGVKVVLATGRPLPDVLSILEELGL 59
Query: 652 LGIA-------AEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIK 704
G +G + + K E +L ++ + +
Sbjct: 60 DGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGT 119
Query: 705 ESALVWHHQDADPDFGS------------CQAKELLDHLESVLANEP-----AVVKRGQH 747
+ + P + E+L+ L L V G
Sbjct: 120 FAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPI 179
Query: 748 IVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESI 795
+++ P+GVSKG +++ + G + V+ GD +D +M E
Sbjct: 180 SLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVA 224
|
Length = 264 |
| >gnl|CDD|215317 PLN02580, PLN02580, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-06
Identities = 70/296 (23%), Positives = 124/296 (41%), Gaps = 56/296 (18%)
Query: 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTV------ 631
S + I + + K ++ A+FLDYDGT+ P I+ P ++S + V
Sbjct: 107 SFEQIAN-FAKGKKIALFLDYDGTLSP---IVDDPDRALMS------DAMRSAVKNVAKY 156
Query: 632 ---FIVSGRGRSSLSEWLAPCEML---------------GIAAEHGYFIRWNKTSEWETN 673
I+SGR R + E + E+ ++ +H I+ E N
Sbjct: 157 FPTAIISGRSRDKVYELVGLTELYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVN 216
Query: 674 HLGADLEWKKIVEPVMRSYTEATD---GSNIEIKESALVWHHQDADPDFGSCQAKELLDH 730
E+ +++ V RS E+T G+ +E + + H+++ D A+ + D
Sbjct: 217 LFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDV 276
Query: 731 LESVLANEPAV-VKRGQHIVEVKPQ-GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSD 788
L+ P + + G+ ++EV+P +KG E +L + + +GDDR+D
Sbjct: 277 LK----KYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTD 332
Query: 789 EDMFESILSTVSGPSL---PVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGLAT 841
ED F+ + G + VP K S A Y L D ++V++ L+ L T
Sbjct: 333 EDAFKVLREGNRGYGILVSSVP----------KESNAFYSLRDPSEVMEFLKSLVT 378
|
Length = 384 |
| >gnl|CDD|177812 PLN02151, PLN02151, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 50.1 bits (119), Expect = 3e-06
Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 44/267 (16%)
Query: 594 IFLDYDGTVVPETSIIKSPGPEVIS------VLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647
+FLDYDGT+ P I+ P +S V K P IVSGR R +S ++
Sbjct: 101 MFLDYDGTLSP---IVDDPDRAFMSKKMRNTVRKLAKCFPTA---IVSGRCREKVSSFVK 154
Query: 648 PCEMLGIAAEHGYFIRW-NKTSEWETNHLG------------ADLEWKKIVEPVMRSYTE 694
E L A HG I+ + S+++ + + +KK+VE T+
Sbjct: 155 LTE-LYYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEK-----TK 208
Query: 695 ATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAV-VKRGQHIVEVKP 753
+ G+ +E + H + + + S +L + + SVL N P + + +G+ ++E++P
Sbjct: 209 SIPGAKVENNKFCASVHFRCVEENKWS----DLANQVRSVLKNYPKLMLTQGRKVLEIRP 264
Query: 754 Q-GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFA 812
KG E +L + F + +GDDR+DED F+ + G + V +A
Sbjct: 265 IIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSK--YA 322
Query: 813 CTVGRKPSKAKYYLDDATDVLKLLQGL 839
K + A Y L + +V++ L+ L
Sbjct: 323 -----KETNASYSLQEPDEVMEFLERL 344
|
Length = 354 |
| >gnl|CDD|178591 PLN03017, PLN03017, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 3e-05
Identities = 70/275 (25%), Positives = 112/275 (40%), Gaps = 43/275 (15%)
Query: 594 IFLDYDGTVVPETSIIKSPGPEVIS------VLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647
+FLDYDGT+ P I+ P +S V K P IV+GR + ++
Sbjct: 114 MFLDYDGTLSP---IVDDPDKAFMSSKMRRTVKKLAKCFPTA---IVTGRCIDKVYNFVK 167
Query: 648 PCEMLGIAAEHGY--------FIRWNKTSEWETNHLGADLEWKKIVEPVMRSY---TEAT 696
E L A HG F R + + D + +++ V R T++T
Sbjct: 168 LAE-LYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPAND--YLPMIDEVYRQLLEKTKST 224
Query: 697 DGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAV-VKRGQHIVEVKPQ- 754
G+ +E + H + D S EL+ + SVL N P + + +G+ + E++P
Sbjct: 225 PGAKVENHKFCASVHFRCVDEKKWS----ELVLQVRSVLKNFPTLKLTQGRKVFEIRPMI 280
Query: 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACT 814
KG E +L + G F + +GDDR+DED F+ + G F
Sbjct: 281 EWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEG---------FGIL 331
Query: 815 VGRKP--SKAKYYLDDATDVLKLLQGLATASSSKP 847
V + P + A Y L D ++V+ L L +
Sbjct: 332 VSKFPKDTDASYSLQDPSEVMDFLARLVEWKQMQQ 366
|
Length = 366 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 6e-05
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 811 FACTVGRKPSKAKYYLDDATDVLKLLQGLATASSSKP 847
F+C VGRK S A+Y L + DV+ L+ LA ASSS P
Sbjct: 898 FSCAVGRKRSNARYLLGSSDDVVSFLKELANASSSFP 934
|
Length = 934 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 43/231 (18%), Positives = 77/231 (33%), Gaps = 43/231 (18%)
Query: 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLG 653
I D DGT++ K +K L + V I +GR L E LG
Sbjct: 1 IASDLDGTLLNSD---KKISERTKEAIKKL-QEKGIKVVIATGRPYRGALPVL---EELG 53
Query: 654 IA----AEHGYFIRWNKTSEWETNHLGAD-----LEW--KKIVEPVMRSYTE----ATDG 698
+ +G +I N + + +E+ + + ++ YT+ +
Sbjct: 54 LDLPVICYNGAYIYDENGKILYKNPISKEDVKEIIEYLKENNLSILL--YTDDGAYILND 111
Query: 699 SNIEIKESALVWHHQDADPD------------FGSCQAKELLD----HLESVLANEPAVV 742
+ +I D E LD L+ + + +
Sbjct: 112 VSEKIVREERYVKSFVLVIDDFELLEDEDINKILIVTDPEDLDELEKELKELFGSLITIT 171
Query: 743 KRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFE 793
G +E+ P+GVSKG + + + G + V+ GD +D +M E
Sbjct: 172 SSGPGYLEIMPKGVSKGTALKALAKHL---GIDLEEVIAFGDGENDIEMLE 219
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 861 | |||
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 100.0 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 99.98 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 99.98 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 99.98 | |
| PLN03017 | 366 | trehalose-phosphatase | 99.97 | |
| PLN02580 | 384 | trehalose-phosphatase | 99.97 | |
| PLN02151 | 354 | trehalose-phosphatase | 99.97 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.94 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.94 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.93 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.93 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.92 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.92 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.92 | |
| PLN02887 | 580 | hydrolase family protein | 99.92 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.91 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.91 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.9 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.9 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.9 | |
| PLN02316 | 1036 | synthase/transferase | 99.9 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.89 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.89 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.89 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.89 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.89 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.89 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.88 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.88 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.88 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.88 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.88 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.88 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.88 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.88 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.87 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.87 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.87 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.86 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.85 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.85 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.85 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.85 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.85 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.84 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.84 | |
| PLN00142 | 815 | sucrose synthase | 99.84 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.84 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.84 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.83 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.83 | |
| PLN02423 | 245 | phosphomannomutase | 99.83 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.83 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.83 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.82 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.82 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.81 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.81 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.81 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.81 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.81 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.8 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.8 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.8 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.8 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.8 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.79 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.79 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.79 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.79 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.79 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.78 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.78 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.78 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.78 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.77 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.77 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.77 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.76 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.76 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.76 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.75 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.75 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.74 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 99.73 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.73 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.72 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.71 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.7 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.7 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.7 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.69 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.69 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.68 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.67 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.66 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.63 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.63 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.57 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.51 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.45 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.44 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.35 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.21 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.21 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.14 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.12 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.12 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.1 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.09 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.01 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.01 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.0 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.0 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 98.98 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.85 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.81 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.8 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 98.77 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.76 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.74 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 98.72 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 98.72 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 98.71 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.69 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 98.68 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 98.67 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 98.64 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 98.63 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.62 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 98.61 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 98.59 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.57 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 98.54 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 98.52 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.49 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.45 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 98.42 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.41 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.4 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 98.4 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.37 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.37 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 98.37 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.35 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 98.31 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 98.3 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.29 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 98.28 | |
| PRK06769 | 173 | hypothetical protein; Validated | 98.26 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.24 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 98.2 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 98.2 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 98.2 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 98.16 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 98.13 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.12 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.11 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 98.1 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 98.08 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 98.06 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 98.03 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 98.0 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.99 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 97.97 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.97 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.96 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.95 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 97.92 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.9 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 97.88 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 97.87 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.85 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.83 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 97.81 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.81 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 97.7 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 97.68 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 97.65 | |
| PLN02940 | 382 | riboflavin kinase | 97.65 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 97.62 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 97.58 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 97.58 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.56 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 97.51 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 97.4 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 97.39 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.36 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.34 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.33 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 97.33 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 97.32 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 97.32 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 97.3 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 97.28 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.24 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 97.15 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 97.14 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 97.13 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 97.11 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 97.06 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 97.02 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.01 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 97.01 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 96.99 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 96.95 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 96.91 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 96.86 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 96.77 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 96.76 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.72 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 96.72 | |
| PRK08238 | 479 | hypothetical protein; Validated | 96.67 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 96.65 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 96.61 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 96.53 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 96.53 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 96.48 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 96.46 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.46 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 96.42 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 96.37 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 96.31 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 96.29 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 96.27 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 96.23 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 96.2 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 96.02 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 95.88 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 95.82 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 95.78 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 95.71 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 95.68 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 95.67 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 95.6 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 95.58 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 95.56 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 95.5 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 95.48 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 95.43 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 95.37 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 95.32 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 95.27 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 94.98 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 94.82 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 94.8 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 94.78 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 94.77 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 94.75 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 94.62 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 94.47 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 94.46 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 94.44 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 94.32 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 94.3 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 94.25 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.22 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 94.06 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 93.87 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 93.73 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 93.65 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 93.58 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 92.89 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 92.26 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 92.25 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 91.75 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 91.6 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 91.21 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 90.55 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 90.05 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 89.79 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 89.63 | |
| PLN02811 | 220 | hydrolase | 88.38 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 87.59 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 87.19 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 86.42 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 86.04 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 85.75 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 85.63 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 85.61 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 85.54 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 84.93 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 84.49 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 84.23 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 84.06 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 84.04 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 83.71 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 81.1 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 80.25 |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-191 Score=1712.47 Aligned_cols=846 Identities=68% Similarity=1.149 Sum_probs=801.2
Q ss_pred CCccccchhhhhhcCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCCC-CCCCCCcEEEEEcCCccceeecCCC-
Q 002984 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDAT-SSGSRERKIIVANMLPLHAKRDTET- 78 (861)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~iivsnrlP~~~~~~~~~- 78 (861)
|+||||+|||||++|+++.++++.+++|++|++||+++++++++.++.+++.+ +..+.+|+||||||||+.+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~g~ 80 (854)
T PLN02205 1 MVSRSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSDGS 80 (854)
T ss_pred CcChhhccHHHhccCCcccccccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCCCC
Confidence 89999999999999999999999999999999999999999988888777766 5666789999999999999987654
Q ss_pred CcEEEEecCChhhHhhhccccC-CCCeEEEecCCCCCChhHHHHHHHhhcCCceEEEEeCChHHHHHHHhhccccccccc
Q 002984 79 GRWCFSLDEDLLLLHLKDGFSS-DTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPL 157 (861)
Q Consensus 79 ~~~~~~~~~~~l~~~l~~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~gf~~~~lwpl 157 (861)
++|+|+|++|||+++|++++.. ..+++||||++.++++++|+++.+.++++|+|+||||+++++++||+||||++|||+
T Consensus 81 ~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPl 160 (854)
T PLN02205 81 KGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPL 160 (854)
T ss_pred cceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccch
Confidence 7899999999999999988854 378999999999888888888888888899999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChH
Q 002984 158 FHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE 237 (861)
Q Consensus 158 ~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e 237 (861)
|||+++..|+++.+|++..|++|++||++||++|++.++|++|+|||||||||+||+|||+++|+++||||||||||++|
T Consensus 161 fH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e 240 (854)
T PLN02205 161 FHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240 (854)
T ss_pred hccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChH
Confidence 99998888888789999999999999999999999999987799999999999999999999999999999999999999
Q ss_pred HHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCC
Q 002984 238 IYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNL 317 (861)
Q Consensus 238 ~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~ 317 (861)
+||+||||+|||+|||+||+|||||++|+|||++||+|+||+++..++|+++++|+||++.|+++|+|||++.|...+..
T Consensus 241 ifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~ 320 (854)
T PLN02205 241 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL 320 (854)
T ss_pred HHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999988888999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHcC--CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHH
Q 002984 318 PATATKIKEIEKQFD--GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYL 395 (861)
Q Consensus 318 ~~~~~~~~~l~~~~~--~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~ 395 (861)
|++.+++++++++++ |+++|+||||+|++|||.+||+|||+||++||+|+|||+||||++|+|+++++|+++++++++
T Consensus 321 ~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~ 400 (854)
T PLN02205 321 PETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHS 400 (854)
T ss_pred hhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHH
Confidence 999999999999995 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCce
Q 002984 396 TAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSM 475 (861)
Q Consensus 396 l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~ 475 (861)
+|+|||++||+.+|+||+|+.+.++++|+.|||++||||++||+|||||||++||+|||++++.++++++.+.+++++|+
T Consensus 401 ~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gv 480 (854)
T PLN02205 401 TVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSM 480 (854)
T ss_pred HHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999998888888888888889999
Q ss_pred EEeccCCCCcccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHHHHhhcccc
Q 002984 476 LVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDHYSKR 555 (861)
Q Consensus 476 lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~~~~ 555 (861)
||+|||+||+++|++|++|||||++++|+||.+||+||++||+.||++++++|++||+.+|+++|+++|.++|+++.+++
T Consensus 481 LiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~ 560 (854)
T PLN02205 481 LVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRR 560 (854)
T ss_pred eEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred ccccCCCcceeeeccCcccccCCHHHHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEC
Q 002984 556 CWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS 635 (861)
Q Consensus 556 ~~~~g~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~T 635 (861)
||++|||++||+++++|+|++|+++.++++|+++++|+|++||||||++..+....++++++++|++||+++|+.|+|+|
T Consensus 561 ~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvS 640 (854)
T PLN02205 561 CWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVS 640 (854)
T ss_pred hcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999986544568999999999999999999999999
Q ss_pred CCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccC
Q 002984 636 GRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDA 715 (861)
Q Consensus 636 GR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~ 715 (861)
||++..+++||+.+++++++|+||++++++++..|+......+..|++.+..+++.|++++||+++|.|+.+++|||+++
T Consensus 641 GR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~a 720 (854)
T PLN02205 641 ARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDA 720 (854)
T ss_pred CCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhC
Confidence 99999999999988779999999999999988889766554567899999999999999999999999999999999999
Q ss_pred CccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHc
Q 002984 716 DPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESI 795 (861)
Q Consensus 716 d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a 795 (861)
||+++.++++++.+++++.+.+.++.+.+|+.++||+|+++|||.|++++++++...|+++++++||||+.||++||+.+
T Consensus 721 dpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~ 800 (854)
T PLN02205 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVI 800 (854)
T ss_pred ChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHh
Confidence 99999999999999999988888888999999999999999999999999876533488999999999999999999999
Q ss_pred cccCCCCCCCCCCceEEEEeCCCCcccceecCCHhHHHHHHHHHHhhcCCC
Q 002984 796 LSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGLATASSSK 846 (861)
Q Consensus 796 g~~~~~~~~~~~~~~~av~vG~~~s~Aky~l~d~~eV~~~L~~L~~~~~~~ 846 (861)
+....+..++..++.|+|+||.++|+|+|+++++++|.++|+.|++.+.+-
T Consensus 801 ~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~~~~~ 851 (854)
T PLN02205 801 TSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASVSEQI 851 (854)
T ss_pred hhhccCCcccccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhcchhh
Confidence 854444556777788999999999999999999999999999999877654
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-158 Score=1413.20 Aligned_cols=747 Identities=37% Similarity=0.679 Sum_probs=672.0
Q ss_pred CCcEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCChh-HHHHHHHhhcCCceEEEEe
Q 002984 58 RERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDAS-EQEEVAQKLLDDFNCVPTF 136 (861)
Q Consensus 58 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv~ 136 (861)
++|+||||||||+.++++++ |.|.++++.|||+++|.+ + ...+++||||+|..++.+ +++.+... +.+|+|+|||
T Consensus 93 ~~rlIiVSNRlPv~~~~~~~-g~~~~~~s~GGLvsaL~~-~-~~~~~~WVGw~g~~~~~~~~~~~~~~~-l~~~~~~pV~ 168 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRGE-DSWSLEISAGGLVSALLG-V-KEFEARWIGWAGVNVPDEVGQKALTKA-LAEKRCIPVF 168 (934)
T ss_pred CCCEEEEECCCCcceeecCC-CceEEeECCCCcHHHhcc-c-ccCCeEEEeeCCCCCCCcchhHHHHHH-hccCceEEEe
Confidence 68999999999999988654 789999999999999975 5 568999999999877653 45555444 5789999999
Q ss_pred CChHHHHHHHhhccccccccccccCC-CCCCC-CCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHH
Q 002984 137 LPHDLQKKFYLGFCKQHLWPLFHYML-PMCPD-HGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPT 214 (861)
Q Consensus 137 l~~~~~~~~y~gf~~~~lwpl~H~~~-~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~ 214 (861)
|+++++++||+||||++|||+|||+. +..+. ...+|++..|++|++||++||++|++.++|+ |+|||||||||+||+
T Consensus 169 l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~g-D~VWVHDYHL~LlP~ 247 (934)
T PLN03064 169 LDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEG-DVVWCHDYHLMFLPK 247 (934)
T ss_pred CCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhHHHH
Confidence 99999999999999999999999973 22110 1246888999999999999999999999985 999999999999999
Q ss_pred HHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecC
Q 002984 215 FLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFG 294 (861)
Q Consensus 215 ~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~g 294 (861)
|||+++|+++||||||||||++|+|||||+|++||+|||+||+|||||++|++||++||.|+||++... .++.++|
T Consensus 248 ~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~----~~v~~~G 323 (934)
T PLN03064 248 CLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGVEDQG 323 (934)
T ss_pred HHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccC----CeEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999998644 2589999
Q ss_pred eEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 002984 295 RTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (861)
Q Consensus 295 r~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvq 374 (861)
|.+.|.++|+|||++.|...+..+++.+++++++++++|+++||||||||+.|||.+||+||++||++||+|++||||||
T Consensus 324 r~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQ 403 (934)
T PLN03064 324 RLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQ 403 (934)
T ss_pred EEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeee
Q 002984 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (861)
Q Consensus 375 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~ 454 (861)
|+.|+|+++++|+++++++.++|++||++||+.+|+||+++.+.++++|+.+||++|||||+||+|||||||++||||||
T Consensus 404 Ia~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~ 483 (934)
T PLN03064 404 IAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (934)
T ss_pred EcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCcccccccCCCCCCCCceEEeccCCCCcccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCH
Q 002984 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDV 533 (861)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~ 533 (861)
.. +.|+||+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+
T Consensus 484 ~~---------------~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~ 548 (934)
T PLN03064 484 DS---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTA 548 (934)
T ss_pred cC---------------CCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCH
Confidence 75 47999999999999999 589999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccccccccCCCcceeeeccCcccccCCHHHHHHHHHhccceEEEecCCccccCCCCC-----
Q 002984 534 AYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSI----- 608 (861)
Q Consensus 534 ~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~~----- 608 (861)
.+|+++|+.+|.++..++.. ++. .+ +++|+.+.+.++|++++.++|||||||||++..+.
T Consensus 549 ~~Wa~~fl~~L~~~~~~~~~-~~~-----------~~---~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~ 613 (934)
T PLN03064 549 QEWAETFVSELNDTVVEAQL-RTR-----------QV---PPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRG 613 (934)
T ss_pred HHHHHHHHHHHHHHHhhhhc-ccc-----------cc---CCCCCHHHHHHHHHhccceEEEEecCceeccCCCCccccc
Confidence 99999999999998654421 111 11 24799999999999999999999999999985432
Q ss_pred ------CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEe-cCCccChHH
Q 002984 609 ------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWET-NHLGADLEW 681 (861)
Q Consensus 609 ------~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~-~~~~~~~~w 681 (861)
...++++++++|++||+++++.|+|+|||+...+++|++.+ +++++|+||++++.++ ..|.. .....+..|
T Consensus 614 ~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~~-~~w~~~~~~~~~~~W 691 (934)
T PLN03064 614 DQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHTK-GEWMTTMPEHLNMDW 691 (934)
T ss_pred ccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecCC-CcceeccccccchHH
Confidence 23478999999999999999999999999999999999887 7999999999998764 46874 333346689
Q ss_pred HHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHH-HHhcCCCEEEEEcCeEEEEecCCCCHHH
Q 002984 682 KKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLE-SVLANEPAVVKRGQHIVEVKPQGVSKGL 760 (861)
Q Consensus 682 ~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~-~~l~~~~~~v~~g~~~vEI~p~gvsKg~ 760 (861)
++.+..+|++|++++||+++|.|+++++|||+.+||+++..|++++.+++. ..+.+.++.+..|+..+||+|.++|||.
T Consensus 692 ~~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~ 771 (934)
T PLN03064 692 VDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGA 771 (934)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHH
Confidence 999999999999999999999999999999999999999999999999994 4556677899999999999999999999
Q ss_pred HHHHHHHHhhcCC---CCCCeEEEEeCCcc-hHHHHHHccccCCCC-------------------------------C--
Q 002984 761 VAEKVLVRMFNGG---RPPDFVMCVGDDRS-DEDMFESILSTVSGP-------------------------------S-- 803 (861)
Q Consensus 761 al~~ll~~l~~~g---i~~d~vlaiGD~~N-D~~Mf~~ag~~~~~~-------------------------------~-- 803 (861)
|+++|++++...+ .++|||+|+||+.. ||+||+++....... .
T Consensus 772 Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (934)
T PLN03064 772 AIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKN 851 (934)
T ss_pred HHHHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccc
Confidence 9999999863222 36899999999875 999999986532100 0
Q ss_pred --------C---------------------C----------CCCceEEEEeCCCCcccceecCCHhHHHHHHHHHHhhcC
Q 002984 804 --------L---------------------P----------VPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGLATASS 844 (861)
Q Consensus 804 --------~---------------------~----------~~~~~~av~vG~~~s~Aky~l~d~~eV~~~L~~L~~~~~ 844 (861)
. + ...+.|+|+||.|.+.|+|++++.+||+.+|+.|++++.
T Consensus 852 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (934)
T PLN03064 852 SQGKKQRSLLSSAKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASS 931 (934)
T ss_pred cccccCCcccccccccccccccCCccccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhcccc
Confidence 0 0 122469999999999999999999999999999998775
Q ss_pred C
Q 002984 845 S 845 (861)
Q Consensus 845 ~ 845 (861)
.
T Consensus 932 ~ 932 (934)
T PLN03064 932 S 932 (934)
T ss_pred C
Confidence 4
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-150 Score=1357.80 Aligned_cols=749 Identities=37% Similarity=0.670 Sum_probs=668.5
Q ss_pred CCCCcEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCChh-HHHHHHHhhcCCceEEE
Q 002984 56 GSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDAS-EQEEVAQKLLDDFNCVP 134 (861)
Q Consensus 56 ~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~p 134 (861)
...+|+||||||||+.++++++ |+|++++++|||+.+|.+ + ...+++||||+|.+++++ ++..+.. .+.+|+|+|
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~~-~~~~~~~~~ggl~~al~~-~-~~~~~~Wvgw~g~~~~~~~~~~~~~~-~~~~~~~~p 83 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTGE-DSWSLEMSPGGLVSALLG-V-KEFETKWIGWPGVDVHDEIGKAALTE-SLAEKGCIP 83 (797)
T ss_pred cCCCCEEEEECCCCccceecCC-CceEEeeCCCCHHHHHHH-H-HhcCceEEEeCCCcCCcccchhHHHH-HhhcCCeEE
Confidence 3578999999999999887643 789999999999999975 4 457999999999876543 3444433 457899999
Q ss_pred EeCChHHHHHHHhhccccccccccccC-CCCCCC-CCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccH
Q 002984 135 TFLPHDLQKKFYLGFCKQHLWPLFHYM-LPMCPD-HGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVL 212 (861)
Q Consensus 135 v~l~~~~~~~~y~gf~~~~lwpl~H~~-~~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~ll 212 (861)
||| ++++++||+||||++|||+|||+ .+..+. ...+|+++.|++|++||++||++|++.++|+ |+|||||||||+|
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-d~vWvhDYhL~ll 161 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEG-DVVWCHDYHLMFL 161 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhhH
Confidence 999 99999999999999999999998 333222 1145667899999999999999999999985 9999999999999
Q ss_pred HHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEe
Q 002984 213 PTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDY 292 (861)
Q Consensus 213 p~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~ 292 (861)
|+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|+|||++||+|+||+++... .+.+
T Consensus 162 p~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i~~ 237 (797)
T PLN03063 162 PQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVD 237 (797)
T ss_pred HHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999876542 4789
Q ss_pred cCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEE
Q 002984 293 FGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVL 372 (861)
Q Consensus 293 ~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvL 372 (861)
+||.++|.++|+|||++.|......+++.....+++++++++++|++|||+|+.|||..+|+||++||+++|+++++++|
T Consensus 238 ~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvL 317 (797)
T PLN03063 238 QGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVML 317 (797)
T ss_pred CCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEE
Confidence 99999999999999999999887777777888889999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeee
Q 002984 373 VQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIV 452 (861)
Q Consensus 373 vqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a 452 (861)
|||+.|+|+++++|+++++++.+++++||++||+.+|.||+++.+.++.+++.++|++|||||+||++||||||++||||
T Consensus 318 vqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA 397 (797)
T PLN03063 318 VQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVA 397 (797)
T ss_pred EEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCcccccccCCCCCCCCceEEeccCCCCcccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccC
Q 002984 453 CRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTH 531 (861)
Q Consensus 453 c~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~ 531 (861)
||.+ +.|++|+|||+|+++++ .+|++|||||++++|+||.++|+|+++||+.|+++++++|.+|
T Consensus 398 ~g~p---------------~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~ 462 (797)
T PLN03063 398 CQKA---------------KKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTH 462 (797)
T ss_pred eecC---------------CCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhC
Confidence 9876 47999999999999999 4899999999999999999999999999999999999999999
Q ss_pred CHhHHHHHHHHHHHHHHHhhccccccccCCCcceeeeccCcccccCCHHHHHHHHHhccceEEEecCCccccCCCC----
Q 002984 532 DVAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETS---- 607 (861)
Q Consensus 532 ~~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~---- 607 (861)
|+.+|+++|+++|.++++.+..+. ...+.+|+.+.+.++|+++++++|||||||||++..+
T Consensus 463 ~~~~Wa~~fl~~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~ 527 (797)
T PLN03063 463 SAQKWADDFMSELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIK 527 (797)
T ss_pred CHHHHHHHHHHHHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccc
Confidence 999999999999999987653211 1234579999999999999999999999999998543
Q ss_pred -CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecC-CccChHHHHHH
Q 002984 608 -IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNH-LGADLEWKKIV 685 (861)
Q Consensus 608 -~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~-~~~~~~w~~~v 685 (861)
....++++++++|++||+++++.|+|+|||+...+++|++.+ .++++|+||++++..+ ..|.... ...+.+|++.+
T Consensus 528 p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~~-~~w~~~~~~~~~~~w~~~v 605 (797)
T PLN03063 528 EMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHTS-GEWVTTMPEHMNLDWVDGV 605 (797)
T ss_pred cccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecCC-CceeeccccccChhHHHHH
Confidence 224588999999999999999999999999999999999875 7999999999998754 4787543 33467899999
Q ss_pred HHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHH-HhcCCCEEEEEcCeEEEEecCCCCHHHHHHH
Q 002984 686 EPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLES-VLANEPAVVKRGQHIVEVKPQGVSKGLVAEK 764 (861)
Q Consensus 686 ~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~-~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ 764 (861)
.++++.|++++||+++|.|+++++|||+.+||+++..++.++.+++.+ .+.+.++.+..|+..+||+|+++|||.|++.
T Consensus 606 ~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ 685 (797)
T PLN03063 606 KNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGR 685 (797)
T ss_pred HHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHH
Confidence 999999999999999999999999999999999998999999999844 4466678999999999999999999999999
Q ss_pred HHHHhhcC---CCCCCeEEEEeCCc-chHHHHHHccccCCC--------C-----------CCCCCCceEEEEeCCCCcc
Q 002984 765 VLVRMFNG---GRPPDFVMCVGDDR-SDEDMFESILSTVSG--------P-----------SLPVPPEIFACTVGRKPSK 821 (861)
Q Consensus 765 ll~~l~~~---gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~--------~-----------~~~~~~~~~av~vG~~~s~ 821 (861)
+++++... +..+|+|+|+||+. .||+||++++..... . .....+++|+|+||.++|+
T Consensus 686 ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~~s~ 765 (797)
T PLN03063 686 ILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQARTK 765 (797)
T ss_pred HHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECCCCcc
Confidence 99976221 23679999999985 699999998742210 0 0123567899999999999
Q ss_pred cceecCCHhHHHHHHHHHHhhcCCC
Q 002984 822 AKYYLDDATDVLKLLQGLATASSSK 846 (861)
Q Consensus 822 Aky~l~d~~eV~~~L~~L~~~~~~~ 846 (861)
|+||+++++||.++|+.|++.+...
T Consensus 766 A~y~l~~~~eV~~lL~~l~~~~~~~ 790 (797)
T PLN03063 766 ARYVLDSSNDVVSLLHKLAVANTTM 790 (797)
T ss_pred CeecCCCHHHHHHHHHHHhccCccc
Confidence 9999999999999999999765543
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-141 Score=1284.13 Aligned_cols=720 Identities=37% Similarity=0.676 Sum_probs=657.7
Q ss_pred CcEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCCh---hHHHHHHHhhcCCceEEEE
Q 002984 59 ERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDA---SEQEEVAQKLLDDFNCVPT 135 (861)
Q Consensus 59 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~---~~~~~~~~~~~~~~~~~pv 135 (861)
+|+||||||||+..++++ ++|.+++++|||+.+|.+.+. ..+++||||+|.+.+. +++.++. ..+.+|+|+||
T Consensus 1 ~~livvsnr~p~~~~~~~--~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~v 76 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED--GGVELTPSVGGLATGLRSFHE-RGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVPV 76 (726)
T ss_pred CCEEEEEcCCCcceeecC--CceEEeeCCCchHHHHHHHhh-cCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEEE
Confidence 489999999999988764 589999999999999987554 5899999999976553 2233333 34678999999
Q ss_pred eCChHHHHHHHhhccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHH
Q 002984 136 FLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTF 215 (861)
Q Consensus 136 ~l~~~~~~~~y~gf~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~ 215 (861)
||+++++++||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++|+ |+|||||||||+||++
T Consensus 77 ~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~~-d~vwvhDYhl~l~p~~ 150 (726)
T PRK14501 77 FLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARPG-DVVWVHDYQLMLLPAM 150 (726)
T ss_pred eCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeCchhhhHHHH
Confidence 99999999999999999999999999766 48999999999999999999999999985 9999999999999999
Q ss_pred HHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCe
Q 002984 216 LRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGR 295 (861)
Q Consensus 216 lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr 295 (861)
||+++|+++||||||+|||++|+|++||+|++||+|||+||+|||||++|++||++||.|++++++... .+.++||
T Consensus 151 lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~----~~~~~gr 226 (726)
T PRK14501 151 LRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG----EIRLGGR 226 (726)
T ss_pred HHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCC----eEEECCE
Confidence 999999999999999999999999999999999999999999999999999999999999999875432 5889999
Q ss_pred EEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 002984 296 TVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQI 375 (861)
Q Consensus 296 ~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi 375 (861)
.++|.++|+|||++.|.+....+.+....+++++.++++++|++|||+++.||+..+|+||++|++++|+++|+++|+||
T Consensus 227 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v 306 (726)
T PRK14501 227 IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQV 306 (726)
T ss_pred EEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEE
Confidence 99999999999999999888778888888889999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeec
Q 002984 376 VNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQ 455 (861)
Q Consensus 376 ~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~ 455 (861)
+.|+|...++|+++++++.+++++||++||..+|.|++++.+.++++|+.++|++|||||+||++||||||++||||||.
T Consensus 307 ~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~ 386 (726)
T PRK14501 307 AVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT 386 (726)
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcC
Confidence 99998888999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCcccccccCCCCCCCCceEEeccCCCCcccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhH
Q 002984 456 GTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAY 535 (861)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~ 535 (861)
+ +.|++|+|+++|+++++.+|++|||||++++|+||.++|+|+.+|++.|++++++++.+||+.+
T Consensus 387 ~---------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~ 451 (726)
T PRK14501 387 D---------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHK 451 (726)
T ss_pred C---------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHH
Confidence 5 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCCCcceeeeccCcccccCCHHHHHHHHHhccceEEEecCCccccCCCC--CCCCCC
Q 002984 536 WARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETS--IIKSPG 613 (861)
Q Consensus 536 W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~--~~~~~s 613 (861)
|+++|++++.++++++.... ...|+.|+.+.+.++|+.+++|+|+|||||||++... ....++
T Consensus 452 w~~~~l~~l~~~~~~~~~~~---------------~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~ 516 (726)
T PRK14501 452 WASDFLDELREAAEKNKAFA---------------SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPD 516 (726)
T ss_pred HHHHHHHHHHHHHhhhhccc---------------cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCC
Confidence 99999999999887653211 1235678999999999999999999999999998432 345689
Q ss_pred HHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHHHHHHh
Q 002984 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYT 693 (861)
Q Consensus 614 ~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~ 693 (861)
++++++|++|++++|+.|+|+|||++..++++++.+ .++++++||++++.++ ..|..... .+..|++.+.++++.|.
T Consensus 517 ~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~-~l~liaenG~~i~~~~-~~w~~~~~-~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 517 KELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAPG-GEWQLLEP-VATEWKDAVRPILEEFV 593 (726)
T ss_pred HHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC-CeEEEEeCCEEEeCCC-CceEECCC-cchhHHHHHHHHHHHHH
Confidence 999999999987789999999999999999999876 5789999999998664 45665432 45789999999999999
Q ss_pred hcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCC
Q 002984 694 EATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGG 773 (861)
Q Consensus 694 ~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~g 773 (861)
++++|++++.++.++.|||++++++++..+++++.+++...+.+..+.+..|+.++||+|+++|||.|++++++ +
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~-----~ 668 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE-----A 668 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHh-----c
Confidence 99999999999999999999999999888889999999888887788889999999999999999999999998 5
Q ss_pred CCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCcccceecCCHhHHHHHHHHHHh
Q 002984 774 RPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGLAT 841 (861)
Q Consensus 774 i~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~Aky~l~d~~eV~~~L~~L~~ 841 (861)
+++++++||||+.||++||+.++.. .++|+||++++.|+|+++++++|+++|+.|++
T Consensus 669 ~~~d~vl~~GD~~nDe~Mf~~~~~~-----------~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 669 GPYDFVLAIGDDTTDEDMFRALPET-----------AITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred CCCCEEEEECCCCChHHHHHhcccC-----------ceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 6889999999999999999998531 27999999999999999999999999999875
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-131 Score=1155.57 Aligned_cols=728 Identities=56% Similarity=0.965 Sum_probs=688.9
Q ss_pred CCcEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCChhHHHHHHHhhcCCceEEEEeC
Q 002984 58 RERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFL 137 (861)
Q Consensus 58 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 137 (861)
..|+|+||||||+.+.++.+++.|.|+++.+|++.++++++. +++..||||++.+++.++++.+.+.++..++|+||++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~ 80 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFL 80 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeeec
Confidence 469999999999999766677899999999999999988766 6899999999988999999999999999999999999
Q ss_pred ChHHHHHHHhhccccccccccccC-CCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHH
Q 002984 138 PHDLQKKFYLGFCKQHLWPLFHYM-LPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFL 216 (861)
Q Consensus 138 ~~~~~~~~y~gf~~~~lwpl~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~l 216 (861)
+++...++|+||||++|||+|||+ .+..+.+. .|+.+.|++|+++|++|||++++.++ ++|+|||||||||++|+|+
T Consensus 81 ~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 81 DDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchhh
Confidence 999999999999999999999999 67766664 78899999999999999999999999 5799999999999999999
Q ss_pred HhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeE
Q 002984 217 RKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRT 296 (861)
Q Consensus 217 r~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~ 296 (861)
|+++++++||||+|+|||++|+|+|+|.|+|||+||++||+|||||++|+|||++||.|++++++.+.++..++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888889999999
Q ss_pred EEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 002984 297 VYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIV 376 (861)
Q Consensus 297 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~ 376 (861)
+.|.++|+|||+.+|......+.+..+..++++.++|+++|++|||+|+.||+.+++.||+++|++||+|+++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecC
Q 002984 377 NPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQG 456 (861)
Q Consensus 377 ~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~ 456 (861)
+|+++++++|++++.++..++++||++||+..++||+++...++..++.++|.+||||+++++||||||+++||++|++.
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCcccccccCCCCCCCCceEEeccCCCCcccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhH
Q 002984 457 TPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAY 535 (861)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~ 535 (861)
+.+++|+|||+|+++.+ ++++++||||.+++|.+|..||+|+++|+..|+.+++.++..|++.+
T Consensus 399 ---------------~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~ 463 (732)
T KOG1050|consen 399 ---------------KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVY 463 (732)
T ss_pred ---------------cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHH
Confidence 47999999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCCCcceeeeccCcccccCCHHHHHHHHHhccceEEEecCCccccCCCCCCCCCCHH
Q 002984 536 WARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPE 615 (861)
Q Consensus 536 W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~ 615 (861)
|+..|++.+ ++||+.|+ +.+++..+ |+.+.+++.|+++++|+|++|||||++...+..
T Consensus 464 W~~~~~~~l---------~~~~~~~~-~~~~~~~~------l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~------ 521 (732)
T KOG1050|consen 464 WAKSFLQGL---------KRIWKVGF-LGFRVTPL------LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK------ 521 (732)
T ss_pred HHHHHHHhh---------hhhhhhcc-cccccccc------cChhHhhhhhhhccceEEEecccccccCCCCch------
Confidence 999999933 45788888 88887655 788999999999999999999999999854322
Q ss_pred HHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHHHHHHhhc
Q 002984 616 VISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEA 695 (861)
Q Consensus 616 ~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~ 695 (861)
+...|+.||.+++|.|+|+|||++..+.+|+..++++|++||||++++.+++ |.+.. .+++|++.+++++++|+++
T Consensus 522 ~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~er 597 (732)
T KOG1050|consen 522 AISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYTER 597 (732)
T ss_pred HHHHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999987 99887 7889999999999999999
Q ss_pred CCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCC
Q 002984 696 TDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRP 775 (861)
Q Consensus 696 ~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~ 775 (861)
|||+++|.|+.+++|||+++|++++.+||+|++++|+. .+.++.+..|+..||+.|.|+|||.++..++..+ .-+
T Consensus 598 t~GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~---~~~ 672 (732)
T KOG1050|consen 598 TPGSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEM---VKE 672 (732)
T ss_pred CCCceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhc---CCC
Confidence 99999999999999999999999999999999999998 7889999999999999999999999999999998 556
Q ss_pred CCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCcccceecCCHhHHHHHHH
Q 002984 776 PDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQ 837 (861)
Q Consensus 776 ~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~Aky~l~d~~eV~~~L~ 837 (861)
+++++|+||+..|++||..+......... ...|+|++|.+++.|+|+++++.+|.++|+
T Consensus 673 ~df~~c~g~d~tDed~~~~~~~~~~~~~~---~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 673 PDFVLCIGDDRTDEDMFEFISKAKDPEKV---EEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred cceEEEecCCCChHHHHHHHhhccCCccc---ceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 79999999999999999999865332222 678999999999999999999999999885
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-121 Score=1029.48 Aligned_cols=455 Identities=27% Similarity=0.519 Sum_probs=420.8
Q ss_pred CcEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCChhHHHHHHHhhcCCceEEEEeCC
Q 002984 59 ERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLP 138 (861)
Q Consensus 59 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~ 138 (861)
+|+||||||+|+... + +.+.|||+++|.+.+. ..+++||||+|...+++ +.+......+++|.||+|+
T Consensus 2 ~rLivVSNRlp~~~~-------~--~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~~--~~~~~~~~~~~~~~~v~L~ 69 (474)
T PRK10117 2 SRLVVVSNRIAPPDE-------H--KASAGGLAVGILGALK-AAGGLWFGWSGETGNED--QPLKKVKKGNITWASFNLS 69 (474)
T ss_pred CCEEEEECCCcCCCC-------C--CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCCc--ccchhhhcCCceEEEecCC
Confidence 689999999996321 1 3457999999988765 57999999999643221 2233333467999999999
Q ss_pred hHHHHHHHhhccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHh
Q 002984 139 HDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRK 218 (861)
Q Consensus 139 ~~~~~~~y~gf~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~ 218 (861)
++++++||+||||++|||+|||+.+. ..|+++.|++|++||++||++|++.++|+ |+|||||||||+||++||+
T Consensus 70 ~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~~-D~VWVHDYhL~llp~~LR~ 143 (474)
T PRK10117 70 EQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKDD-DIIWIHDYHLLPFASELRK 143 (474)
T ss_pred HHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeccHhhHHHHHHHH
Confidence 99999999999999999999999765 58999999999999999999999999985 9999999999999999999
Q ss_pred hcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEE
Q 002984 219 RFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVY 298 (861)
Q Consensus 219 ~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~ 298 (861)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ..+.++||.+.
T Consensus 144 ~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v~ 220 (474)
T PRK10117 144 RGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAFR 220 (474)
T ss_pred hCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876432 24678899999
Q ss_pred EEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 002984 299 IKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNP 378 (861)
Q Consensus 299 i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p 378 (861)
|+++|+|||++.|...+..+ ...++++++++++|+++|+||||+||+|||.++|+||++||++||+|+|||+|+||+.|
T Consensus 221 v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p 299 (474)
T PRK10117 221 TEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 299 (474)
T ss_pred EEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC
Confidence 99999999999999888755 56778899999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCC
Q 002984 379 ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458 (861)
Q Consensus 379 ~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~ 458 (861)
+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.++|++||||+|||+|||||||++||+|||++
T Consensus 300 sR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~-- 377 (474)
T PRK10117 300 SRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 377 (474)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred cccccccCCCCCCCCceEEeccCCCCcccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHH
Q 002984 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (861)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (861)
.++|+||+|||+||+++|.+|++|||||++++|+||.+||+||.+||+.|+++++++|.+||+.+|++
T Consensus 378 ------------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~ 445 (474)
T PRK10117 378 ------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQE 445 (474)
T ss_pred ------------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHH
Confidence 25799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 002984 539 SFAQDLERACR 549 (861)
Q Consensus 539 ~fl~~l~~~~~ 549 (861)
+|+.+|.++..
T Consensus 446 ~fL~~L~~~~~ 456 (474)
T PRK10117 446 CFISDLKQIVP 456 (474)
T ss_pred HHHHHHHHhhh
Confidence 99999998753
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-119 Score=1025.16 Aligned_cols=462 Identities=28% Similarity=0.464 Sum_probs=428.4
Q ss_pred EEcCCccceeecCCC-CcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCCh-hHH-HHHHHhhcCCceEEEEeCChH
Q 002984 64 VANMLPLHAKRDTET-GRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDA-SEQ-EEVAQKLLDDFNCVPTFLPHD 140 (861)
Q Consensus 64 vsnrlP~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~-~~~~~~~~~~~~~~pv~l~~~ 140 (861)
||||||+.+++++++ .+|.+++++|||+++|.+.+.+..+++||||+|.+.++ ++. +.+......+|+|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 799999999987654 35888999999999998877555789999999975321 111 112222245799999999999
Q ss_pred HHHHHHhhccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhc
Q 002984 141 LQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRF 220 (861)
Q Consensus 141 ~~~~~y~gf~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~ 220 (861)
++++||+||||++|||+|||+.+. ..|+++.|++|++||++||++|++.++|+ |+|||||||||+||++||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAEG-ATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999998654 58999999999999999999999999984 999999999999999999999
Q ss_pred CCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCC---------------
Q 002984 221 NRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKR--------------- 285 (861)
Q Consensus 221 ~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~--------------- 285 (861)
|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|+||+++....
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998875432
Q ss_pred --CeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhC
Q 002984 286 --GHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQH 363 (861)
Q Consensus 286 --~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~ 363 (861)
..+++.++||.+.|+++|+|||++.|......+++.+.++++|+++.|+++|++|||+|++|||.++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 123588999999999999999999999998889999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCC
Q 002984 364 PGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGM 443 (861)
Q Consensus 364 P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~ 443 (861)
|+|+||++||||+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++++++.+||++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 002984 444 NLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEK 523 (861)
Q Consensus 444 nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~ 523 (861)
|||++||||||++ ++|+||+|||+||+++|.+|++|||||++++|+||.+||+||.+||+.|+++
T Consensus 395 NLVa~Eyva~~~~---------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~ 459 (487)
T TIGR02398 395 NLVAKEYVAAQGL---------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMRE 459 (487)
T ss_pred CcchhhHHhhhcC---------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999875 4799999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCHhHHHHHHHHHHHH
Q 002984 524 HYRYVSTHDVAYWARSFAQDLER 546 (861)
Q Consensus 524 ~~~~v~~~~~~~W~~~fl~~l~~ 546 (861)
++++|.+||+.+|+++|+.+|..
T Consensus 460 l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 460 MFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHHHhhCCHHHHHHHHHHHhhh
Confidence 99999999999999999999875
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-120 Score=1033.78 Aligned_cols=467 Identities=45% Similarity=0.848 Sum_probs=358.8
Q ss_pred cEEEEEcCCccceeecCCCCc--EEEEecCChhhHhhhccccCCCCeEEEecCCCCCChhH--HHHHHHhhcCCceEEEE
Q 002984 60 RKIIVANMLPLHAKRDTETGR--WCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASE--QEEVAQKLLDDFNCVPT 135 (861)
Q Consensus 60 ~~iivsnrlP~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~--~~~~~~~~~~~~~~~pv 135 (861)
|+||||||||+.+++++++|. |+++.+.|||+.+|.+.+ +..+++||||++.+.+..+ ++.+.+.+.++|+|+||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~-~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV 80 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLL-KKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPV 80 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHH-HHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHH-hcCCCEEEEeCCCcCccccccccchhhhcccCceEEEE
Confidence 799999999999999874455 888888899999986644 4589999999998766544 44555667899999999
Q ss_pred eCChHHHHHHHhhccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHH
Q 002984 136 FLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTF 215 (861)
Q Consensus 136 ~l~~~~~~~~y~gf~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~ 215 (861)
||+++++++||+||||++|||+|||.++..|.. ..|+.+.|++|++||++||++|++.++| +|+|||||||||+||++
T Consensus 81 ~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~~-~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~~ 158 (474)
T PF00982_consen 81 FLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPDL-ARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQM 158 (474)
T ss_dssp EE-HHHHHHHTTTHHHHTHHHHHTT-GG----G-----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHHH
T ss_pred EcCHHHHHHHHHhhhhhccCccccccccccccc-chhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHHH
Confidence 999999999999999999999999987622322 6899999999999999999999999997 59999999999999999
Q ss_pred HHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCe
Q 002984 216 LRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGR 295 (861)
Q Consensus 216 lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr 295 (861)
||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++.+.+| ++.++||
T Consensus 159 LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~Gr 236 (474)
T PF00982_consen 159 LRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNGR 236 (474)
T ss_dssp HHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETTE
T ss_pred HHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999888765 6999999
Q ss_pred EEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCC-CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 002984 296 TVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDG-KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (861)
Q Consensus 296 ~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvq 374 (861)
.++|.++|+|||++.|...+..+++.++.+++++++++ +++|+||||+|++|||.+||+||++||++||+|+|||+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999999999999999999999988 49999999999999999999999999999999999999999
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeee
Q 002984 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (861)
Q Consensus 375 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~ 454 (861)
|+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++++++.+||++||||++||+|||||||++||++||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCcccccccCCCCCCCCceEEeccCCCCcccCC-CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCH
Q 002984 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDV 533 (861)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~ 533 (861)
++ ++|+||+|||+||+++|. +|++|||||++++|+||.+||+||++||+.|+++++++|.+||+
T Consensus 397 ~~---------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~ 461 (474)
T PF00982_consen 397 DD---------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDV 461 (474)
T ss_dssp -T---------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-H
T ss_pred cC---------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCH
Confidence 86 479999999999999997 67999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHH
Q 002984 534 AYWARSFAQDLER 546 (861)
Q Consensus 534 ~~W~~~fl~~l~~ 546 (861)
.+|+++|+++|++
T Consensus 462 ~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 462 QWWAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhC
Confidence 9999999999974
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-114 Score=966.22 Aligned_cols=466 Identities=39% Similarity=0.680 Sum_probs=432.5
Q ss_pred CCCCCcEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCChhHHHHHHHhhcCCceEEE
Q 002984 55 SGSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVP 134 (861)
Q Consensus 55 ~~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~p 134 (861)
.....|+|+||||+|+...+..+++...+..+.|||+.+|++.+ ...+++|+||+|...+..+..........++...|
T Consensus 11 ~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~-~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (486)
T COG0380 11 PLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLL-RVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAP 89 (486)
T ss_pred cccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhh-HhhcceEEecCceeccccccchhhhhccccceEEE
Confidence 45678999999999999876666677888999999999997654 45899999999976642232222333356899999
Q ss_pred EeCChHHHHHHHhhccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHH
Q 002984 135 TFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPT 214 (861)
Q Consensus 135 v~l~~~~~~~~y~gf~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~ 214 (861)
|+++.+++++||+||||++|||+|||+.+. ..|++.+|++|++||++|||+|++.++++ |+||||||||+|||+
T Consensus 90 v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~g-DiIWVhDYhL~L~P~ 163 (486)
T COG0380 90 VILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEPG-DIIWVHDYHLLLVPQ 163 (486)
T ss_pred EecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEechhhhhHH
Confidence 999999999999999999999999999876 58999999999999999999999999985 999999999999999
Q ss_pred HHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEE---
Q 002984 215 FLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD--- 291 (861)
Q Consensus 215 ~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--- 291 (861)
|||++.|+++||||||||||++|+|+|||+|+||++|||+||+|||||.+|++||+++|+|+++.... ..+.
T Consensus 164 mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~-----~~~~~~~ 238 (486)
T COG0380 164 MLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGD-----ADIRFNG 238 (486)
T ss_pred HHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccccc-----ccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999986521 1233
Q ss_pred ecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCC-CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcE
Q 002984 292 YFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDG-KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKV 370 (861)
Q Consensus 292 ~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~v 370 (861)
++|+.+.+..+|+|||+..|......+.+..++.++++.+.+ +++|+||||+|+.|||..+++||++||++||+|+|||
T Consensus 239 ~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kv 318 (486)
T COG0380 239 ADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKV 318 (486)
T ss_pred cCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCce
Confidence 458999999999999999999999999998999999999976 9999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceee
Q 002984 371 VLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKY 450 (861)
Q Consensus 371 vLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea 450 (861)
+|+||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|+++.++.+++.+||++||++++||+|||||||++||
T Consensus 319 vliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEy 398 (486)
T COG0380 319 VLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEY 398 (486)
T ss_pred EEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhcc
Q 002984 451 IVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (861)
Q Consensus 451 ~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~ 530 (861)
+|||.. ++|+||+|||+||+.+|.+|++|||||.+++|+||++||+|+++||+.|++++++.|.+
T Consensus 399 Va~q~~---------------~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~ 463 (486)
T COG0380 399 VAAQRD---------------KPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLT 463 (486)
T ss_pred HHhhcC---------------CCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Confidence 999874 47999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHhHHHHHHHHHHHHH
Q 002984 531 HDVAYWARSFAQDLERA 547 (861)
Q Consensus 531 ~~~~~W~~~fl~~l~~~ 547 (861)
||+++|+++|+.+|.++
T Consensus 464 ~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 464 HDVARWANSFLDDLAQA 480 (486)
T ss_pred hhHHHHHHHHHHHHHhc
Confidence 99999999999999873
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-108 Score=935.54 Aligned_cols=454 Identities=39% Similarity=0.708 Sum_probs=424.0
Q ss_pred cEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCCh-hHHHHHHHhhcCCceEEEEeCC
Q 002984 60 RKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDA-SEQEEVAQKLLDDFNCVPTFLP 138 (861)
Q Consensus 60 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~~~~~~~~~~~~~~~pv~l~ 138 (861)
|+||||||+|+...++ + ++++.|||+++|.+.+. ..+++||||+|...++ +++..+...+..+|+|+||||+
T Consensus 1 ~livvsnr~p~~~~~~---~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 73 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG---G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLS 73 (456)
T ss_pred CEEEEECCCCccccCC---C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECC
Confidence 6999999999988754 2 56778999999988665 5799999999976553 3334555556788999999999
Q ss_pred hHHHHHHHhhccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHh
Q 002984 139 HDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRK 218 (861)
Q Consensus 139 ~~~~~~~y~gf~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~ 218 (861)
++++++||+||||++|||+|||+.+. .+|+++.|++|++||++||++|++.++| +|+|||||||||+||.+||+
T Consensus 74 ~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 74 EEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHHHh
Confidence 99999999999999999999999654 5899999999999999999999999997 49999999999999999999
Q ss_pred hcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEE
Q 002984 219 RFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVY 298 (861)
Q Consensus 219 ~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~ 298 (861)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|++|+++... ++.+.|+.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~~ 223 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999977543 3678899999
Q ss_pred EEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 002984 299 IKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNP 378 (861)
Q Consensus 299 i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p 378 (861)
|.++|+|||++.|.+....+.+.+..+.+++++.++++|++|||+++.||+..+|+||++|++++|+++++++|+|++.|
T Consensus 224 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p 303 (456)
T TIGR02400 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP 303 (456)
T ss_pred EEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC
Confidence 99999999999999888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCC
Q 002984 379 ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458 (861)
Q Consensus 379 ~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~ 458 (861)
+|+++++|+++++++++++++||++||..+|.|++++.+.++.+++.++|++|||||+||++||||||++|||||+.|
T Consensus 304 ~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P-- 381 (456)
T TIGR02400 304 SRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDP-- 381 (456)
T ss_pred CccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCCCceEEeccCCCCcccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHH
Q 002984 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (861)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (861)
+.|+||+|+++|+++++.+|++|||||++++|+||.++|+|+.+||+.|+++++++|.+||+.+|++
T Consensus 382 -------------~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 448 (456)
T TIGR02400 382 -------------KDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWRE 448 (456)
T ss_pred -------------CCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHH
Confidence 3599999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 002984 539 SFAQDLE 545 (861)
Q Consensus 539 ~fl~~l~ 545 (861)
+|+.+|.
T Consensus 449 ~~l~~l~ 455 (456)
T TIGR02400 449 DFLSDLN 455 (456)
T ss_pred HHHHHhh
Confidence 9999874
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-98 Score=861.20 Aligned_cols=459 Identities=44% Similarity=0.787 Sum_probs=428.7
Q ss_pred cEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCChhHHHHHHHhhcCCceEEEEeCCh
Q 002984 60 RKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPH 139 (861)
Q Consensus 60 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~ 139 (861)
|+||||||+|+..+++++ |.|.++++.|||+.+|.+.+ +..+++||||++.+.+..+++.+.+....+|+|+|||+++
T Consensus 1 ~li~vsnr~p~~~~~~~~-~~~~~~~~~ggl~~~l~~~~-~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 78 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD-GEFEARRSAGGLATALKGLL-KRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSP 78 (460)
T ss_pred CEEEEECCCCceeEEcCC-CceEeccCCCcHHHHHHHHH-hcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCH
Confidence 689999999999998764 68999999999999997654 4579999999998776544444555667899999999999
Q ss_pred HHHHHHHhhccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhh
Q 002984 140 DLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKR 219 (861)
Q Consensus 140 ~~~~~~y~gf~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~ 219 (861)
++++.||+||||++|||+|||+.+. .+|++++|++|++||++||++|.+.++| +|+||||||||++||.+||++
T Consensus 79 ~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 79 EEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHhh
Confidence 9999999999999999999999776 5899999999999999999999999997 499999999999999999999
Q ss_pred cCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEE
Q 002984 220 FNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 299 (861)
Q Consensus 220 ~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i 299 (861)
.++++||||||||||++|+|+++|+|++|+++||+||+|||||++|++||+++|+++++++.... ..+.++|+.++|
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~---~~i~~~g~~~~i 229 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDD---GGVEYGGRRVRV 229 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCC---ceEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999886652 368899999999
Q ss_pred EEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 002984 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPA 379 (861)
Q Consensus 300 ~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~ 379 (861)
.++|+|||++.|......+....+.++++..+.++++|++|||+++.||+..+|+||+++++++|+++++++|+|+|.|+
T Consensus 230 ~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~ 309 (460)
T cd03788 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPS 309 (460)
T ss_pred EEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCC
Confidence 99999999999998777676666667777778899999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCc
Q 002984 380 RGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPI 459 (861)
Q Consensus 380 r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~ 459 (861)
|+++++++++++++.+++++||.+||..+|.|++++.+.++.+++.++|++|||||+||.+||||||++|||||+.|
T Consensus 310 ~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p--- 386 (460)
T cd03788 310 RTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDD--- 386 (460)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred ccccccCCCCCCCCceEEeccCCCCcccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHH
Q 002984 460 MDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539 (861)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~ 539 (861)
++|++|+|+++|+++.+.+|++|||+|++++|++|.++|+|+++|++.+++++++++.++|+..|+++
T Consensus 387 ------------~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~ 454 (460)
T cd03788 387 ------------DPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANS 454 (460)
T ss_pred ------------CCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 47999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 002984 540 FAQDL 544 (861)
Q Consensus 540 fl~~l 544 (861)
|+++|
T Consensus 455 ~l~~l 459 (460)
T cd03788 455 FLDDL 459 (460)
T ss_pred HHHhh
Confidence 99987
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-34 Score=341.15 Aligned_cols=540 Identities=14% Similarity=0.130 Sum_probs=322.8
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHh-----------------cCCchHHH-HHHhhcCCEEeec
Q 002984 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR-----------------TLPVRDEI-LRGLLNCDLIGFH 261 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~-----------------~lp~r~~i-l~~ll~~dligF~ 261 (861)
|+|+-|+.+--.+...|++++ +++..++.|.- ..+-++ .++.|-++ -..+-.||.|--.
T Consensus 312 DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIas 388 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITS 388 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEe
Confidence 899999777667777777665 58999999963 111111 12222221 2235678988877
Q ss_pred ChHhHHHHHHHHH-------HHhCCccccCCCeeeEEecCe-EEEEEEecccCCchHHHHhhCCchh-------------
Q 002984 262 TFDYARHFLSCCS-------RMLGLDYESKRGHIGLDYFGR-TVYIKILPVGVHMGRLESVLNLPAT------------- 320 (861)
Q Consensus 262 t~~~~~~Fl~~~~-------r~lg~~~~~~~~~~~~~~~gr-~~~i~v~p~GId~~~~~~~~~~~~~------------- 320 (861)
|......-...-. |.|.. ...+ ++.++|+ .-++.|+|+|||+++|.+.......
T Consensus 389 T~qE~~eq~~lY~~~~~~~~~~~~~--~~~~---gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~ 463 (1050)
T TIGR02468 389 TRQEIEEQWGLYDGFDVILERKLRA--RARR---GVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPD 463 (1050)
T ss_pred CHHHHHHHHHHhccCCchhhhhhhh--hhcc---cccccccCCCCeEEeCCCCcHHHccCCCccccchhccccccccccc
Confidence 7766554322110 11100 0111 2333443 2278899999999999753211110
Q ss_pred HHHHHHHHHHc--CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHH----HHHHHHHH
Q 002984 321 ATKIKEIEKQF--DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDV----QEAKKETY 394 (861)
Q Consensus 321 ~~~~~~l~~~~--~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~----~~~~~~v~ 394 (861)
.....+++..+ .++++||+|+|+++.||+..+|+||..+.+..+.. ++++ .+|... +.... .+...++.
T Consensus 464 ~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 464 PPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred chhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHH
Confidence 00112343333 56889999999999999999999999987543321 2333 345321 11111 12234445
Q ss_pred HHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhc----ccceecccccCCCCcceeeeeeecCCCcccccccCCCCC
Q 002984 395 LTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVA----ECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDS 470 (861)
Q Consensus 395 ~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~A----Dv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~ 470 (861)
.++++. +....|.|.++++++++.++|+.| ||||+||.+|||||+++|||||
T Consensus 539 ~li~~l-------gL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAc----------------- 594 (1050)
T TIGR02468 539 KLIDKY-------DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH----------------- 594 (1050)
T ss_pred HHHHHh-------CCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHh-----------------
Confidence 555443 334567788899999999999998 6999999999999999999999
Q ss_pred CCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHH
Q 002984 471 PHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (861)
Q Consensus 471 ~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 547 (861)
+.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++|+ .++.++...++.++.+..+++...++.+++.+...
T Consensus 595 --GlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~-Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 595 --GLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVA-DKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred --CCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 55699999999888873 5899999999999999999997 44555556667777888899999999999888876
Q ss_pred HHhhcc-cccc-----c-----cC--------CCcceeeeccCccccc----------CCHH----HHH-----------
Q 002984 548 CRDHYS-KRCW-----G-----IG--------LGLGFRVLSLSPSFRR----------LSID----HIV----------- 583 (861)
Q Consensus 548 ~~~~~~-~~~~-----~-----~g--------~g~~~~~~~~~~~f~~----------l~~~----~~~----------- 583 (861)
+..+-. ++.. . .+ +.|++.+ |-.... ++.+ .+.
T Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1050)
T TIGR02468 672 RPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSV---DGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPK 748 (1050)
T ss_pred hccCcccccccccccccccccCccccccccccchhhccc---cccccccccccccccccchhhHHHHHHHHHhhcccccc
Confidence 544311 0000 0 01 0111110 000000 0000 010
Q ss_pred ------------HHHH--hccceEEE--ecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhc
Q 002984 584 ------------SAYR--KTERRAIF--LDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (861)
Q Consensus 584 ------------~~y~--~s~~klI~--~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~ 647 (861)
..|. ....++++ +|+|+| .. ....-..+++++++-.....+.++++|||+...+..++.
T Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~----~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~ 823 (1050)
T TIGR02468 749 GSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD----LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLK 823 (1050)
T ss_pred ccccccccccccccCccccccceEEEEEeccCCC-CC----hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHH
Confidence 1111 11246666 999999 32 111222333333321124458899999999999999886
Q ss_pred cc--c---CCceEecCcEEEEeCCc-----ceEEec---CCccChHH-HHHHHHHHHHHhhc--------CCCceEeecc
Q 002984 648 PC--E---MLGIAAEHGYFIRWNKT-----SEWETN---HLGADLEW-KKIVEPVMRSYTEA--------TDGSNIEIKE 705 (861)
Q Consensus 648 ~~--~---~lgliaenG~~i~~~~~-----~~~~~~---~~~~~~~w-~~~v~~i~~~y~~~--------~~gs~ie~k~ 705 (861)
.. + ..-+||.-|..|+++.. ..|... ....+..| .+.+...+..+... .++...+...
T Consensus 824 ~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~ 903 (1050)
T TIGR02468 824 SGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEE 903 (1050)
T ss_pred hCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChh
Confidence 53 2 22379999998887521 112110 01112235 22333333333221 1223333333
Q ss_pred c----eeEeeeccCCccchhccHHHHHHHHHHHhcCCCE-EEEEc-CeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeE
Q 002984 706 S----ALVWHHQDADPDFGSCQAKELLDHLESVLANEPA-VVKRG-QHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFV 779 (861)
Q Consensus 706 ~----~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~-~v~~g-~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~v 779 (861)
. ++.+...+.+. . ...+++.+.|+.. .... .+++. ..+++|.|..+|||.|+++|..++ |++.+++
T Consensus 904 ~q~~~k~SY~v~d~~~--~-~~v~elr~~Lr~~--gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rw---gi~l~~v 975 (1050)
T TIGR02468 904 SSTDHCYAFKVKDPSK--V-PPVKELRKLLRIQ--GLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRW---GIELANM 975 (1050)
T ss_pred hCCCceEEEEecCccc--C-ccHHHHHHHHHhC--CCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHc---CCChHHe
Confidence 2 23332222221 1 1234555555422 2222 33444 489999999999999999999999 9999999
Q ss_pred EE-EeCCcc-hH-HHHHHc
Q 002984 780 MC-VGDDRS-DE-DMFESI 795 (861)
Q Consensus 780 la-iGD~~N-D~-~Mf~~a 795 (861)
++ +||+.| |+ +|+...
T Consensus 976 ~VfaGdSGntD~e~Ll~G~ 994 (1050)
T TIGR02468 976 AVFVGESGDTDYEGLLGGL 994 (1050)
T ss_pred EEEeccCCCCCHHHHhCCc
Confidence 55 999999 94 455443
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-32 Score=281.96 Aligned_cols=249 Identities=32% Similarity=0.467 Sum_probs=214.3
Q ss_pred CHHHHHHHHHhccceEEEecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceE
Q 002984 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIA 655 (861)
Q Consensus 578 ~~~~~~~~y~~s~~klI~~DlDGTLl~~~~--~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgli 655 (861)
....+.+.|.++++++|++||||||++... ....++++++++|++|+++.++.|+|+|||+...++.|++ +++++++
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~ 83 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLI 83 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEE
Confidence 445677889999999999999999998543 3556889999999999999999999999999999999998 7899999
Q ss_pred ecCcEEEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHh
Q 002984 656 AEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVL 735 (861)
Q Consensus 656 aenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l 735 (861)
|+||++++...+..|..........|++.+..+++.|++++||+++|.|+.++.|||++++++....++.......
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~---- 159 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATL---- 159 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhc----
Confidence 9999999988888888887778889999999999999999999999999999999999997754433322222211
Q ss_pred cCCC-EEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEE
Q 002984 736 ANEP-AVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACT 814 (861)
Q Consensus 736 ~~~~-~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~ 814 (861)
.+.. +.+..|+..||++|.++|||.++++++++. ....++++|.|||.+|++||++++... .++|.
T Consensus 160 ~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~---~~~~~~~~~aGDD~TDE~~F~~v~~~~----------~~~v~ 226 (266)
T COG1877 160 INELKLRVTPGKMVVELRPPGVSKGAAIKYIMDEL---PFDGRFPIFAGDDLTDEDAFAAVNKLD----------SITVK 226 (266)
T ss_pred cccccEEEEeCceEEEEeeCCcchHHHHHHHHhcC---CCCCCcceecCCCCccHHHHHhhccCC----------CceEE
Confidence 1222 889999999999999999999999999987 555568999999999999999998631 26899
Q ss_pred eCCCCcccceecCCHhHHHHHHHHHHhhcC
Q 002984 815 VGRKPSKAKYYLDDATDVLKLLQGLATASS 844 (861)
Q Consensus 815 vG~~~s~Aky~l~d~~eV~~~L~~L~~~~~ 844 (861)
+|.+.+.|++.+.+.......|.++.....
T Consensus 227 v~~~~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 227 VGVGSTQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred ecCCcccccccccccHHHHHHHHHHHHHhh
Confidence 999999999999999999998888887664
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.4e-31 Score=280.22 Aligned_cols=237 Identities=28% Similarity=0.411 Sum_probs=195.6
Q ss_pred ccceEEEecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCC
Q 002984 589 TERRAIFLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNK 666 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~--~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~ 666 (861)
+++++|+|||||||++..+ ....+++++.++|++|++++++.|+|+|||+...+...+ .+++++++++||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~-~~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV-KLPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC-CCCceeEEeecCEEEecCC
Confidence 4679999999999998532 345678999999999999999999999999988887665 3467899999999998744
Q ss_pred cc-eEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccC-CccchhccHHHHHHHHHHHhcCCCEEEEE
Q 002984 667 TS-EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDA-DPDFGSCQAKELLDHLESVLANEPAVVKR 744 (861)
Q Consensus 667 ~~-~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~-d~~~~~~~a~el~~~L~~~l~~~~~~v~~ 744 (861)
.. .|... ......|++.+.++++.+.++ ||+++|.|+.++.|||+.+ +++.+..++.++..++. ...++.+..
T Consensus 80 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~---~~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNL-TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL---SFTDLEVMD 154 (244)
T ss_pred Ccceeeec-hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh---cCCCEEEEE
Confidence 33 35443 222247888899999888887 9999999999999999998 77777666666666653 334688899
Q ss_pred cCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEe--CCCCccc
Q 002984 745 GQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTV--GRKPSKA 822 (861)
Q Consensus 745 g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v--G~~~s~A 822 (861)
++.++|++|.++|||.+++++++++ ++.++++++|||+.||++||+.+... ......++++| |..++.|
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~---~~~~~~~i~iGD~~~D~~~~~~~~~~------~~~~g~~~v~v~~g~~~~~A 225 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQ---PGSGISPVYLGDDITDEDAFRVVNNQ------WGNYGFYPVPIGSGSKKTVA 225 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhc---ccCCCceEEEcCCCcHHHHHHHHhcc------cCCCCeEEEEEecCCcCCCc
Confidence 9999999999999999999999999 88889999999999999999999321 00112367888 8888999
Q ss_pred ceecCCHhHHHHHHHHHH
Q 002984 823 KYYLDDATDVLKLLQGLA 840 (861)
Q Consensus 823 ky~l~d~~eV~~~L~~L~ 840 (861)
+|+++++++|..+|+.|+
T Consensus 226 ~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 226 KFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred eEeCCCHHHHHHHHHHHh
Confidence 999999999999999886
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=4e-32 Score=286.68 Aligned_cols=227 Identities=42% Similarity=0.685 Sum_probs=155.1
Q ss_pred EecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEe
Q 002984 595 FLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWET 672 (861)
Q Consensus 595 ~~DlDGTLl~~~~--~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~ 672 (861)
||||||||.+..+ ....++++++++|++||+++++.|+|+|||+...+..+ ..+++++++++||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~-~~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERF-GGIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH--S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHh-cCCCCceEEEEeeEEeccCccccccc
Confidence 7999999999654 34578899999999999999999999999999995554 46789999999999999999888887
Q ss_pred cCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCC-CEEEEEcCeEEEE
Q 002984 673 NHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANE-PAVVKRGQHIVEV 751 (861)
Q Consensus 673 ~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~-~~~v~~g~~~vEI 751 (861)
........|++.+.++++.|.++++|+++|.|++++.|||+.++++++..++.++.+++.+.+... ++.+..|+..+||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 666677889999999999999999999999999999999999999999889999999999877765 7999999999999
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC-----CCCcccceec
Q 002984 752 KPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG-----RKPSKAKYYL 826 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-----~~~s~Aky~l 826 (861)
+|.+++||.|+++|++.+...+..+++++|+|||.+||+||+++.... ..-+++.|| .++|.|+|++
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~--------~~~~~i~V~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELE--------EGGFGIKVGSVSVGEKPTAASYRL 231 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS------------EEEEES---------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcc--------cCCCCeEEEeeccccccccccccc
Confidence 999999999999999988222233789999999999999999998631 012455555 4579999999
Q ss_pred CCHh
Q 002984 827 DDAT 830 (861)
Q Consensus 827 ~d~~ 830 (861)
+|+.
T Consensus 232 ~~p~ 235 (235)
T PF02358_consen 232 DDPS 235 (235)
T ss_dssp ----
T ss_pred ccCC
Confidence 9873
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.7e-31 Score=281.08 Aligned_cols=232 Identities=21% Similarity=0.252 Sum_probs=186.7
Q ss_pred ceEEEecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcc
Q 002984 591 RRAIFLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTS 668 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~--~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~ 668 (861)
.++|++||||||++..+ .+..++++++++|++|++++|+.|+|+|||+...+.++++.+ .+.++++||++++..++.
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~ 92 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDINGK 92 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCCC
Confidence 57999999999998432 356789999999999965589999999999999999999765 467999999999876554
Q ss_pred eEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhc-CC-CEEEEEcC
Q 002984 669 EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLA-NE-PAVVKRGQ 746 (861)
Q Consensus 669 ~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~-~~-~~~v~~g~ 746 (861)
.+... ...+|.+.+...++.+..+++|+++|.|+..+.+||+.++. ..+.+..+.+.+. .. ...+.+|+
T Consensus 93 ~~~~~---l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~------~~~~~~~l~~~i~~~~~~~~~~~g~ 163 (266)
T PRK10187 93 THIVH---LPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQ------HEDALLALAQRITQIWPQLALQPGK 163 (266)
T ss_pred eeecc---CChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCc------cHHHHHHHHHHHHhhCCceEEeCCC
Confidence 33322 23345454555566667888999999999999999987632 1233333432222 22 36677899
Q ss_pred eEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCcccceec
Q 002984 747 HIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYL 826 (861)
Q Consensus 747 ~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~Aky~l 826 (861)
.++||+|+++|||.|++++++++ |+..+++++|||+.||++||+.+... ..++|+||++.+.|+|++
T Consensus 164 ~~lEi~p~g~~Kg~al~~ll~~~---~~~~~~v~~~GD~~nD~~mf~~~~~~----------~g~~vavg~a~~~A~~~l 230 (266)
T PRK10187 164 CVVEIKPRGTNKGEAIAAFMQEA---PFAGRTPVFVGDDLTDEAGFAVVNRL----------GGISVKVGTGATQASWRL 230 (266)
T ss_pred EEEEeeCCCCCHHHHHHHHHHhc---CCCCCeEEEEcCCccHHHHHHHHHhc----------CCeEEEECCCCCcCeEeC
Confidence 99999999999999999999999 99999999999999999999999431 016999999999999999
Q ss_pred CCHhHHHHHHHHHHhhcCC
Q 002984 827 DDATDVLKLLQGLATASSS 845 (861)
Q Consensus 827 ~d~~eV~~~L~~L~~~~~~ 845 (861)
+++++|..+|+.|+.....
T Consensus 231 ~~~~~v~~~L~~l~~~~~~ 249 (266)
T PRK10187 231 AGVPDVWSWLEMITTAQQQ 249 (266)
T ss_pred CCHHHHHHHHHHHHHhhhc
Confidence 9999999999999987664
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=282.16 Aligned_cols=245 Identities=25% Similarity=0.323 Sum_probs=194.9
Q ss_pred HHHhccceEEEecCCccccCCCC-CCC-CCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEE
Q 002984 585 AYRKTERRAIFLDYDGTVVPETS-IIK-SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFI 662 (861)
Q Consensus 585 ~y~~s~~klI~~DlDGTLl~~~~-~~~-~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i 662 (861)
++.+.+..+||+||||||++..+ .++ .+++++.++|++|+ +++.|+|+|||++..+.++++ +..++++++||+.+
T Consensus 105 ~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La--~~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~hGa~i 181 (366)
T PLN03017 105 EASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA--KCFPTAIVTGRCIDKVYNFVK-LAELYYAGSHGMDI 181 (366)
T ss_pred HHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh--cCCcEEEEeCCCHHHHHHhhc-ccCceEEEcCCcEE
Confidence 34456789999999999996543 333 79999999999994 679999999999999999964 35688999999999
Q ss_pred EeCCcceEEe------cCCccChHHHHHHHHH---HHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHH
Q 002984 663 RWNKTSEWET------NHLGADLEWKKIVEPV---MRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLES 733 (861)
Q Consensus 663 ~~~~~~~~~~------~~~~~~~~w~~~v~~i---~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~ 733 (861)
+.+++..+.. ........|...+.++ +..++++++|+++|.|+.++.|||+.+++.. +.++..++.+
T Consensus 182 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~----~~~l~~~~~~ 257 (366)
T PLN03017 182 KGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKK----WSELVLQVRS 257 (366)
T ss_pred ecCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHH----HHHHHHHHHH
Confidence 8765422111 0111233476666666 5567788999999999999999999997742 4567777777
Q ss_pred HhcCCC-EEEEEcCeEEEEecC-CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceE
Q 002984 734 VLANEP-AVVKRGQHIVEVKPQ-GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIF 811 (861)
Q Consensus 734 ~l~~~~-~~v~~g~~~vEI~p~-gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~ 811 (861)
.+.+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+....+++|||||.+||+||+.+.... ..+
T Consensus 258 vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~---------~G~ 328 (366)
T PLN03017 258 VLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRG---------EGF 328 (366)
T ss_pred HHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcC---------Cce
Confidence 777766 789999999999995 999999999999998222222568999999999999999996421 137
Q ss_pred EEEeC--CCCcccceecCCHhHHHHHHHHHHhhcCC
Q 002984 812 ACTVG--RKPSKAKYYLDDATDVLKLLQGLATASSS 845 (861)
Q Consensus 812 av~vG--~~~s~Aky~l~d~~eV~~~L~~L~~~~~~ 845 (861)
+|.|| .+++.|+|+++++++|.++|+.|+.....
T Consensus 329 gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~~ 364 (366)
T PLN03017 329 GILVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQM 364 (366)
T ss_pred EEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHHhh
Confidence 99999 57899999999999999999999987554
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=282.96 Aligned_cols=243 Identities=27% Similarity=0.354 Sum_probs=189.7
Q ss_pred HHHHhccceEEEecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEE
Q 002984 584 SAYRKTERRAIFLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYF 661 (861)
Q Consensus 584 ~~y~~s~~klI~~DlDGTLl~~~~--~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (861)
.+|.+++.+++||||||||++... ....++++++++|++|++. ..|+|+|||+...+.++++. ..++++++||+.
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 478999999999999999998553 4556899999999999654 47999999999999999974 478999999999
Q ss_pred EEeCCc----ceEEecC------------CccChHHHHHHHHHHHH---HhhcCCCceEeeccceeEeeeccCCccchhc
Q 002984 662 IRWNKT----SEWETNH------------LGADLEWKKIVEPVMRS---YTEATDGSNIEIKESALVWHHQDADPDFGSC 722 (861)
Q Consensus 662 i~~~~~----~~~~~~~------------~~~~~~w~~~v~~i~~~---y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~ 722 (861)
++.+.+ ..|.... ......|...+.++++. ++++++|+++|.|+.++.|||+.+++++...
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~ 268 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPL 268 (384)
T ss_pred eecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHH
Confidence 986422 1122211 01134577666666555 5667799999999999999999998876443
Q ss_pred cHHHHHHHHHHHhcCCC-EEEEEcCeEEEEec-CCCCHHHHHHHHHHHhhcCCCCCC-e--EEEEeCCcchHHHHHHccc
Q 002984 723 QAKELLDHLESVLANEP-AVVKRGQHIVEVKP-QGVSKGLVAEKVLVRMFNGGRPPD-F--VMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 723 ~a~el~~~L~~~l~~~~-~~v~~g~~~vEI~p-~gvsKg~al~~ll~~l~~~gi~~d-~--vlaiGD~~ND~~Mf~~ag~ 797 (861)
++.++. ..+.+.+ +.+..|+.++||+| .++|||.|++++++++ |+..+ + ++||||+.||++||+.+..
T Consensus 269 ~~~~l~----~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~---g~~~~d~~~pi~iGDD~TDedmF~~L~~ 341 (384)
T PLN02580 269 VAQCVH----DVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESL---GLSNCDDVLPIYIGDDRTDEDAFKVLRE 341 (384)
T ss_pred HHHHHH----HHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhc---CCCcccceeEEEECCCchHHHHHHhhhc
Confidence 334343 3344444 78889999999999 5999999999999998 77654 3 4999999999999998753
Q ss_pred cCCCCCCCCCCceEEEEeCC--CCcccceecCCHhHHHHHHHHHHhhcCC
Q 002984 798 TVSGPSLPVPPEIFACTVGR--KPSKAKYYLDDATDVLKLLQGLATASSS 845 (861)
Q Consensus 798 ~~~~~~~~~~~~~~av~vG~--~~s~Aky~l~d~~eV~~~L~~L~~~~~~ 845 (861)
.. ..++|+||+ +.+.|+|+++++++|.++|+.|+.....
T Consensus 342 ~~---------~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~~~ 382 (384)
T PLN02580 342 GN---------RGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWKKS 382 (384)
T ss_pred cC---------CceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhhhc
Confidence 11 014666665 6899999999999999999999986543
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-30 Score=278.26 Aligned_cols=243 Identities=24% Similarity=0.365 Sum_probs=194.2
Q ss_pred HhccceEEEecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEe
Q 002984 587 RKTERRAIFLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRW 664 (861)
Q Consensus 587 ~~s~~klI~~DlDGTLl~~~~--~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~ 664 (861)
.+.+..+||+||||||++... ....++++++++|++|+ ++..|+|+|||+...+..+++ ++.++++++||+.++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La--~~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA--KCFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh--cCCCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 456778999999999997543 34478999999999996 457999999999999999996 4578999999999987
Q ss_pred CC-cceEEec----CCccChHHHHHHHHHHHHH---hhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhc
Q 002984 665 NK-TSEWETN----HLGADLEWKKIVEPVMRSY---TEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLA 736 (861)
Q Consensus 665 ~~-~~~~~~~----~~~~~~~w~~~v~~i~~~y---~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~ 736 (861)
++ +..|+.. .......|...+.++++.+ +.++||+++|.|++++.|||+.++++ +..++.+++.+.+.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 63 3455321 1123456888777776655 47789999999999999999999774 23566677777777
Q ss_pred CCC-EEEEEcCeEEEEecC-CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEE
Q 002984 737 NEP-AVVKRGQHIVEVKPQ-GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACT 814 (861)
Q Consensus 737 ~~~-~~v~~g~~~vEI~p~-gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~ 814 (861)
+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+...++++|||||.+||+||+.+.... ..+++.
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~---------~G~gI~ 317 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKK---------QGLGIL 317 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcC---------CCccEE
Confidence 766 789999999999996 999999999999987222233457999999999999999986421 015777
Q ss_pred eC--CCCcccceecCCHhHHHHHHHHHHhhcCC
Q 002984 815 VG--RKPSKAKYYLDDATDVLKLLQGLATASSS 845 (861)
Q Consensus 815 vG--~~~s~Aky~l~d~~eV~~~L~~L~~~~~~ 845 (861)
|| .+++.|+|+++++++|.++|+.|+.....
T Consensus 318 Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~~~ 350 (354)
T PLN02151 318 VSKYAKETNASYSLQEPDEVMEFLERLVEWKQL 350 (354)
T ss_pred eccCCCCCcceEeCCCHHHHHHHHHHHHHhhhc
Confidence 77 67899999999999999999999976543
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=242.08 Aligned_cols=225 Identities=19% Similarity=0.225 Sum_probs=159.8
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCC-ceEecCcEEEEeCCcc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML-GIAAEHGYFIRWNKTS 668 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l-gliaenG~~i~~~~~~ 668 (861)
++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|+|||+...+.+++..+.-. .++++||++|.+.+..
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~-~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 77 (264)
T COG0561 2 MIKLLAFDLDGTLLD---SNKTISPETKEALARL-REKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGEL 77 (264)
T ss_pred CeeEEEEcCCCCccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcE
Confidence 679999999999999 7888999999999998 8999999999999999999999887544 5999999999999665
Q ss_pred eEEecCCccChHHHHHHHHHHHHHhhc--CCCceEeeccc------------eeEe-----eeccC---Cc--cchh---
Q 002984 669 EWETNHLGADLEWKKIVEPVMRSYTEA--TDGSNIEIKES------------ALVW-----HHQDA---DP--DFGS--- 721 (861)
Q Consensus 669 ~~~~~~~~~~~~w~~~v~~i~~~y~~~--~~gs~ie~k~~------------~l~~-----~~~~~---d~--~~~~--- 721 (861)
.+....+ .+.+..+++..... ....+...... .... ..... +. .+..
T Consensus 78 i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T COG0561 78 LFQKPLS------REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKD 151 (264)
T ss_pred EeeecCC------HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecC
Confidence 5555443 33344444433221 00011110000 0000 00000 00 0011
Q ss_pred -ccHHHHHHHHHHHhcCCCEEEEEcCe-EEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccC
Q 002984 722 -CQAKELLDHLESVLANEPAVVKRGQH-IVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTV 799 (861)
Q Consensus 722 -~~a~el~~~L~~~l~~~~~~v~~g~~-~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 799 (861)
....++.+.+.+.+......+.++.. ++||+|+|+|||.|++++++++ |+++++|+||||+.||++||+.+|.
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~l---gi~~~~v~afGD~~ND~~Ml~~ag~-- 226 (264)
T COG0561 152 HEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVAGL-- 226 (264)
T ss_pred hHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHh---CCCHHHeEEeCCccccHHHHHhcCe--
Confidence 12233444454444444455555555 4999999999999999999999 9999999999999999999999996
Q ss_pred CCCCCCCCCceEEEEeCCC----Ccccceec--CCHhHHHHHHHHHHh
Q 002984 800 SGPSLPVPPEIFACTVGRK----PSKAKYYL--DDATDVLKLLQGLAT 841 (861)
Q Consensus 800 ~~~~~~~~~~~~av~vG~~----~s~Aky~l--~d~~eV~~~L~~L~~ 841 (861)
+|+|||+ +..|++++ ++.++|.+.|+.+..
T Consensus 227 ------------gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 227 ------------GVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred ------------eeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 7889987 36777664 457889999998754
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=241.80 Aligned_cols=225 Identities=17% Similarity=0.169 Sum_probs=154.5
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEe-CCc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRW-NKT 667 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~-~~~ 667 (861)
|+|+|++|+||||++ .++.++++++++|+++ +++|+.|+|+|||+...+.+++..+. ..++++.||+.|.. .+.
T Consensus 1 m~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~ 76 (272)
T PRK15126 1 MARLAAFDMDGTLLM---PDHHLGEKTLSTLARL-RERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGE 76 (272)
T ss_pred CccEEEEeCCCcCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCC
Confidence 478999999999999 7888999999999999 79999999999999999999987764 23579999999985 444
Q ss_pred ceEEecCCccChHHHHHHHHHHHHHhhc--------CCCceEeeccc---------eeEeeecc---C-Cccch---h--
Q 002984 668 SEWETNHLGADLEWKKIVEPVMRSYTEA--------TDGSNIEIKES---------ALVWHHQD---A-DPDFG---S-- 721 (861)
Q Consensus 668 ~~~~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~~---------~l~~~~~~---~-d~~~~---~-- 721 (861)
..+...++. +.+..+++..... ..+.+...... ...+...+ . ...+. .
T Consensus 77 ~l~~~~i~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~ 150 (272)
T PRK15126 77 LLHRQDLPA------DVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCG 150 (272)
T ss_pred EEEeecCCH------HHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEEC
Confidence 445544432 2333333222111 01111110000 00000000 0 00000 0
Q ss_pred --ccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccC
Q 002984 722 --CQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTV 799 (861)
Q Consensus 722 --~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 799 (861)
....++.+.+.+.+......+.++..++||.|+++|||.|+++|++++ |+++++++||||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag~-- 225 (272)
T PRK15126 151 DHDDLTRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHL---GLSLADCMAFGDAMNDREMLGSVGR-- 225 (272)
T ss_pred CHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHh---CCCHHHeEEecCCHHHHHHHHHcCC--
Confidence 112233334444443333344566789999999999999999999999 9999999999999999999999996
Q ss_pred CCCCCCCCCceEEEEeCCC----Ccccce--ec--CCHhHHHHHHHHHHh
Q 002984 800 SGPSLPVPPEIFACTVGRK----PSKAKY--YL--DDATDVLKLLQGLAT 841 (861)
Q Consensus 800 ~~~~~~~~~~~~av~vG~~----~s~Aky--~l--~d~~eV~~~L~~L~~ 841 (861)
+|+|||+ +..|+| ++ ++.++|.++|+++..
T Consensus 226 ------------~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 226 ------------GFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred ------------ceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 7888887 356665 44 357889999999873
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-25 Score=240.52 Aligned_cols=224 Identities=17% Similarity=0.201 Sum_probs=152.5
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccC-CceEecCcEEEEeC-Cc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM-LGIAAEHGYFIRWN-KT 667 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~-lgliaenG~~i~~~-~~ 667 (861)
++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|+|||++..+.+++..+.. .++|+.||+.|... +.
T Consensus 1 mikli~~DlDGTLl~---~~~~is~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 76 (266)
T PRK10976 1 MYQVVASDLDGTLLS---PDHTLSPYAKETLKLL-TARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGN 76 (266)
T ss_pred CceEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCC
Confidence 368999999999999 7788999999999999 799999999999999999998877652 35799999999863 43
Q ss_pred ceEEecCCccChHHHHHHHHHHHHHhhc---------CCCceEeeccce---------eEeeec---cCCc-cch---h-
Q 002984 668 SEWETNHLGADLEWKKIVEPVMRSYTEA---------TDGSNIEIKESA---------LVWHHQ---DADP-DFG---S- 721 (861)
Q Consensus 668 ~~~~~~~~~~~~~w~~~v~~i~~~y~~~---------~~gs~ie~k~~~---------l~~~~~---~~d~-~~~---~- 721 (861)
.++...++ .+.+.++++...+. ..+.++...... ..+... .... .+. .
T Consensus 77 ~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~ 150 (266)
T PRK10976 77 LIFSHNLD------RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFT 150 (266)
T ss_pred EehhhcCC------HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEE
Confidence 34444333 22333444332211 011111110000 000000 0000 000 0
Q ss_pred c----cHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 722 C----QAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 722 ~----~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
. ...++.+.+.+.+......+.++..++||.|+++|||.|++++++++ |+++++++||||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~l---gi~~~~viafGD~~NDi~Ml~~ag~ 227 (266)
T PRK10976 151 CDSHEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKL---GYSLKDCIAFGDGMNDAEMLSMAGK 227 (266)
T ss_pred cCCHHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHc---CCCHHHeEEEcCCcccHHHHHHcCC
Confidence 0 11122333433333323344567789999999999999999999999 9999999999999999999999997
Q ss_pred cCCCCCCCCCCceEEEEeCCCC----cccc--eec--CCHhHHHHHHHHHH
Q 002984 798 TVSGPSLPVPPEIFACTVGRKP----SKAK--YYL--DDATDVLKLLQGLA 840 (861)
Q Consensus 798 ~~~~~~~~~~~~~~av~vG~~~----s~Ak--y~l--~d~~eV~~~L~~L~ 840 (861)
+|+|||+. ..|+ +++ ++.++|.+.|+++.
T Consensus 228 --------------~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 228 --------------GCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred --------------CeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 68888873 5665 555 35788999999875
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-25 Score=238.31 Aligned_cols=224 Identities=16% Similarity=0.198 Sum_probs=154.4
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccC----CceEecCcEEEEe-
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM----LGIAAEHGYFIRW- 664 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~----lgliaenG~~i~~- 664 (861)
++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|+|||++..+..++..+.. .++|+.||+.|..
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 2 AIKLIAIDMDGTLLL---PDHTISPAVKQAIAAA-RAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKA 77 (270)
T ss_pred ceEEEEEecCCcCcC---CCCccCHHHHHHHHHH-HHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEEC
Confidence 479999999999999 7788999999999999 799999999999999999998877642 2489999999986
Q ss_pred -CCcceEEecCCccChHHHHHHHHHHHHHhhc--------CCCceEeeccce-----------eEeeecc---CCc--cc
Q 002984 665 -NKTSEWETNHLGADLEWKKIVEPVMRSYTEA--------TDGSNIEIKESA-----------LVWHHQD---ADP--DF 719 (861)
Q Consensus 665 -~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~~~-----------l~~~~~~---~d~--~~ 719 (861)
.+..++...++.. .+..+++...+. ..+.+...+... ....+.. .++ .+
T Consensus 78 ~~~~~i~~~~l~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (270)
T PRK10513 78 ADGETVAQTALSYD------DYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQF 151 (270)
T ss_pred CCCCEEEecCCCHH------HHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCc
Confidence 3444565554432 222222221110 111222111100 0000000 000 00
Q ss_pred h---hc----cHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHH
Q 002984 720 G---SC----QAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMF 792 (861)
Q Consensus 720 ~---~~----~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf 792 (861)
. .. ...++.+.+.+.+......+.++..++||.|+|+|||.|++++++++ |+++++++||||+.||++||
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml 228 (270)
T PRK10513 152 PKVMMIDEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHL---GIKPEEVMAIGDQENDIAMI 228 (270)
T ss_pred eEEEEeCCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHH
Confidence 0 00 11222233333332323345667789999999999999999999999 99999999999999999999
Q ss_pred HHccccCCCCCCCCCCceEEEEeCCC----CcccceecC--CHhHHHHHHHHHH
Q 002984 793 ESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLD--DATDVLKLLQGLA 840 (861)
Q Consensus 793 ~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~--d~~eV~~~L~~L~ 840 (861)
+.+|. +|+|||+ +..|+|++. +.++|.++|+++.
T Consensus 229 ~~ag~--------------~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 229 EYAGV--------------GVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HhCCc--------------eEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 99996 7888887 477889874 5688999998874
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.9e-24 Score=229.39 Aligned_cols=225 Identities=15% Similarity=0.136 Sum_probs=150.3
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccC--CceEecCcEEEEeCCc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM--LGIAAEHGYFIRWNKT 667 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~--lgliaenG~~i~~~~~ 667 (861)
.+|+|++|+||||++ .++.++++++++|++| +++|+.|+|+|||+...+..++..+.- .++|++||+.|..++.
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~ 81 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRL-REAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQ 81 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCc
Confidence 478999999999999 6778899999999999 799999999999999999999877642 3589999999987643
Q ss_pred c-------eEEecCCccChHHHHHHHHHHHHHhhcCCCceEe--eccc-----eeEe-e-----eccCCc---cchhccH
Q 002984 668 S-------EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIE--IKES-----ALVW-H-----HQDADP---DFGSCQA 724 (861)
Q Consensus 668 ~-------~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie--~k~~-----~l~~-~-----~~~~d~---~~~~~~a 724 (861)
. .+...++ .+.+..+++...+. .+..+. .... .... . ...... .+.....
T Consensus 82 ~~~~~~~~~~~~~l~------~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (271)
T PRK03669 82 WQDHPDFPRIISGIS------HGEIRQVLNTLREK-EGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDS 154 (271)
T ss_pred ccCCCCceEeecCCC------HHHHHHHHHHHHHh-cCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCC
Confidence 1 2222222 22333333332211 010000 0000 0000 0 000000 0000001
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCC---CCCeEEEEeCCcchHHHHHHccccCCC
Q 002984 725 KELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGR---PPDFVMCVGDDRSDEDMFESILSTVSG 801 (861)
Q Consensus 725 ~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi---~~d~vlaiGD~~ND~~Mf~~ag~~~~~ 801 (861)
.+.+..+.+.+....+.+..+..++||.|+++|||.|++++++++ |+ ++++++||||+.||++||+.+|.
T Consensus 155 ~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~l---gi~~~~~~~viafGDs~NDi~Ml~~ag~---- 227 (271)
T PRK03669 155 DERMAQFTARLAELGLQFVQGARFWHVLDASAGKDQAANWLIATY---QQLSGTRPTTLGLGDGPNDAPLLDVMDY---- 227 (271)
T ss_pred HHHHHHHHHHHHHCCCEEEecCeeEEEecCCCCHHHHHHHHHHHH---HhhcCCCceEEEEcCCHHHHHHHHhCCE----
Confidence 122233333333223444456678999999999999999999999 99 99999999999999999999996
Q ss_pred CCCCCCCceEEEEeCCCC----------cccceecC--CHhHHHHHHHHHHhh
Q 002984 802 PSLPVPPEIFACTVGRKP----------SKAKYYLD--DATDVLKLLQGLATA 842 (861)
Q Consensus 802 ~~~~~~~~~~av~vG~~~----------s~Aky~l~--d~~eV~~~L~~L~~~ 842 (861)
+|+||+.. ..|.|+++ +.+++.+.|+.+.++
T Consensus 228 ----------gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 228 ----------AVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred ----------EEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 78888532 15678776 467999999988764
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-24 Score=240.80 Aligned_cols=301 Identities=15% Similarity=0.160 Sum_probs=207.8
Q ss_pred hHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhh
Q 002984 174 RVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL 253 (861)
Q Consensus 174 ~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll 253 (861)
...+..|..+++.++.++.+..++ |+||+||++.+.++...+. ...++.+++|.++.... . ..+..+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~--Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~-~---~~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDLDA--DVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN-R---RVWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccCCC--CEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc-H---HHHHHHHHHHH
Confidence 446788888888887764444444 9999999998877776653 36789999999885431 0 01123334445
Q ss_pred cCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc--
Q 002984 254 NCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-- 331 (861)
Q Consensus 254 ~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-- 331 (861)
.+|.+.+.+.++++.++ ..+ .+ ++|+|||+...... +........+++++
T Consensus 135 ~~d~~i~~~~~~~~~~~----------------------~~~--~~-vipngvd~~~~~~~---~~~~~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPPQV----------------------PPR--KV-IIPPSIDPLSGKNR---ELSPADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCCCC----------------------CCc--eE-EeCCCCCCCccccC---CCCHHHHHHHHHHhCC
Confidence 67777766633221111 112 23 78999997532111 11122334455555
Q ss_pred -CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 002984 332 -DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (861)
Q Consensus 332 -~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~ 410 (861)
.++++|++|||+++.||+..+++||+.+.+++|+++ |+.+|.+... .++..++.+++. ++.+ . ..
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~~~~~---~~~~----~--~~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVYEEVL---EYAE----G--DP 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHHHHHH---HHhC----C--CC
Confidence 478899999999999999999999999988888866 8888865421 122233322222 1111 1 11
Q ss_pred cEEEEcCC-CCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC
Q 002984 411 PVVLIDRP-VPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS 489 (861)
Q Consensus 411 pvv~~~~~-v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 489 (861)
.++++... ++.+++.++|++||+|++||.+||||++++||||| +.|+|+|..+|..+.+.
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~-------------------G~Pvv~s~~~~~~~~i~ 313 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWK-------------------GKPVIAGPVGGIPLQIE 313 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHc-------------------CCCEEEcCCCCchhhcc
Confidence 24444433 48999999999999999999999999999999999 45699999999888773
Q ss_pred ---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHHHHHHH
Q 002984 490 ---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLER 546 (861)
Q Consensus 490 ---~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 546 (861)
.|++++ +.+++|++|.+++++ +++++.+.++.++++ ..+++...++++++.+++
T Consensus 314 ~~~~g~~~~--~~~~~a~~i~~ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 314 DGETGFLVD--TVEEAAVRILYLLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred cCCceEEeC--CcHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 367776 467899999999984 455666677777776 468999999988876654
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.3e-24 Score=223.43 Aligned_cols=215 Identities=20% Similarity=0.225 Sum_probs=149.2
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeC--C
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWN--K 666 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~--~ 666 (861)
++|+|++|+||||++ .++.+++++.++|+++ +++|+.|+|+|||+...+.+++..++ ..+++++||+.+... +
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (230)
T PRK01158 2 KIKAIAIDIDGTITD---KDRRLSLKAVEAIRKA-EKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDG 77 (230)
T ss_pred ceeEEEEecCCCcCC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCC
Confidence 479999999999999 7788999999999999 79999999999999999998876664 335899999999875 3
Q ss_pred cceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccc--ee--EeeeccCCccchhccHHHHHHHHHHHhcCCCEEE
Q 002984 667 TSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKES--AL--VWHHQDADPDFGSCQAKELLDHLESVLANEPAVV 742 (861)
Q Consensus 667 ~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~--~l--~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v 742 (861)
...+....+ ...+.+....+.|... ...+..... .. ...... ....++.+.+++ + ...+.+
T Consensus 78 ~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~-~-~~~~~~ 142 (230)
T PRK01158 78 KRIFLGDIE----ECEKAYSELKKRFPEA--STSLTKLDPDYRKTEVALRRT-------VPVEEVRELLEE-L-GLDLEI 142 (230)
T ss_pred CEEEEcchH----HHHHHHHHHHHhcccc--ceeeecCCcccccceeeeccc-------ccHHHHHHHHHH-c-CCcEEE
Confidence 334443321 1222222222222111 001110000 00 000000 011223333332 2 122445
Q ss_pred EEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----
Q 002984 743 KRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK---- 818 (861)
Q Consensus 743 ~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---- 818 (861)
..+..++|+.|+++|||.|++++++++ |++++++++|||+.||++||+.+|. +++|||+
T Consensus 143 ~~~~~~~ei~~~~~~Kg~al~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~--------------~vam~Na~~~v 205 (230)
T PRK01158 143 VDSGFAIHIKSPGVNKGTGLKKLAELM---GIDPEEVAAIGDSENDLEMFEVAGF--------------GVAVANADEEL 205 (230)
T ss_pred EecceEEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhcCc--------------eEEecCccHHH
Confidence 555678999999999999999999999 9999999999999999999999986 6888886
Q ss_pred CcccceecC--CHhHHHHHHHHHH
Q 002984 819 PSKAKYYLD--DATDVLKLLQGLA 840 (861)
Q Consensus 819 ~s~Aky~l~--d~~eV~~~L~~L~ 840 (861)
+..|+|++. +.++|.+.|+++.
T Consensus 206 k~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 206 KEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred HHhcceEecCCCcChHHHHHHHHh
Confidence 367888874 5678999998764
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.9e-24 Score=247.34 Aligned_cols=231 Identities=19% Similarity=0.214 Sum_probs=157.0
Q ss_pred HHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccC---C------
Q 002984 582 IVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM---L------ 652 (861)
Q Consensus 582 ~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~---l------ 652 (861)
.++.|+ .++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||++..+..++..+.. .
T Consensus 300 ~~~~~~-~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl-~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~ 374 (580)
T PLN02887 300 SLRFYK-PKFSYIFCDMDGTLLN---SKSQISETNAKALKEA-LSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISES 374 (580)
T ss_pred chhhhc-cCccEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeec
Confidence 345554 4689999999999999 7889999999999999 799999999999999999988876531 1
Q ss_pred -ceEecCcEEEEeC-CcceEEecCCccChHHHHHHHHHHHHHhhc--------CCCceEeeccceeE-ee--ec------
Q 002984 653 -GIAAEHGYFIRWN-KTSEWETNHLGADLEWKKIVEPVMRSYTEA--------TDGSNIEIKESALV-WH--HQ------ 713 (861)
Q Consensus 653 -gliaenG~~i~~~-~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~~~l~-~~--~~------ 713 (861)
++|+.||+.|+.. +..++...++ .+.+..+++...+. .++.+......... ++ +.
T Consensus 375 ~p~I~~NGA~I~d~~g~~I~~~~L~------~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~ 448 (580)
T PLN02887 375 SPGVFLQGLLVYGRQGREIYRSNLD------QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEI 448 (580)
T ss_pred ccEEeecCeEEEECCCcEEEEEeCC------HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccc
Confidence 2456688888753 3344554444 23334444332211 11111110000000 00 00
Q ss_pred --cCC-----ccch---h-cc----HHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCe
Q 002984 714 --DAD-----PDFG---S-CQ----AKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDF 778 (861)
Q Consensus 714 --~~d-----~~~~---~-~~----a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~ 778 (861)
+.+ ..+. . .. ..++.+.+.+.+......+.++..++||.|+++|||.|+++|++++ |+++++
T Consensus 449 i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~l---GI~~ee 525 (580)
T PLN02887 449 MSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHL---GVSPDE 525 (580)
T ss_pred cCCHHHhhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHc---CCCHHH
Confidence 000 0000 0 00 1122333434443333455677789999999999999999999999 999999
Q ss_pred EEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecC--CHhHHHHHHHHHH
Q 002984 779 VMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLD--DATDVLKLLQGLA 840 (861)
Q Consensus 779 vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~--d~~eV~~~L~~L~ 840 (861)
|+||||+.||++||+.+|. +|+|||+ +..|+|++. +.++|.+.|++++
T Consensus 526 viAFGDs~NDIeMLe~AG~--------------gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 526 IMAIGDGENDIEMLQLASL--------------GVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred EEEEecchhhHHHHHHCCC--------------EEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 9999999999999999996 7899987 478888874 5788999998864
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=222.40 Aligned_cols=216 Identities=24% Similarity=0.296 Sum_probs=154.2
Q ss_pred EEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeC-CcceEE
Q 002984 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWN-KTSEWE 671 (861)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~-~~~~~~ 671 (861)
|++|+||||++ .++.++++++++|++| +++|+.++++|||++..+.+++..++ ..++|+.||+++... +...+.
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKEL-QEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHH-HHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhh-cccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 7888999999999999 78999999999999999999998765 358999999999444 444455
Q ss_pred ecCCccChHHHHHHHHHHHHHhhcC-------C-CceEeecc--c--------eeEee-ecc----CCccc-------hh
Q 002984 672 TNHLGADLEWKKIVEPVMRSYTEAT-------D-GSNIEIKE--S--------ALVWH-HQD----ADPDF-------GS 721 (861)
Q Consensus 672 ~~~~~~~~~w~~~v~~i~~~y~~~~-------~-gs~ie~k~--~--------~l~~~-~~~----~d~~~-------~~ 721 (861)
..++ .+.+..+++...+.. + +.++.... . ...+. ... ..... ..
T Consensus 77 ~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~ 150 (254)
T PF08282_consen 77 KPID------SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDP 150 (254)
T ss_dssp ESB-------HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCH
T ss_pred hhee------ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccc
Confidence 4443 233334443333211 1 11111110 0 00000 000 00000 01
Q ss_pred ccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCC
Q 002984 722 CQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSG 801 (861)
Q Consensus 722 ~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~ 801 (861)
.....+.+++.+.+.+....+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~---~i~~~~~~~~GD~~ND~~Ml~~~~~---- 223 (254)
T PF08282_consen 151 EDLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYL---GISPEDIIAFGDSENDIEMLELAGY---- 223 (254)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHH---TTSGGGEEEEESSGGGHHHHHHSSE----
T ss_pred hhhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhc---ccccceeEEeecccccHhHHhhcCe----
Confidence 234456666766666554677888999999999999999999999999 9999999999999999999999985
Q ss_pred CCCCCCCceEEEEeCCC----CcccceecCCH--hHHHHHH
Q 002984 802 PSLPVPPEIFACTVGRK----PSKAKYYLDDA--TDVLKLL 836 (861)
Q Consensus 802 ~~~~~~~~~~av~vG~~----~s~Aky~l~d~--~eV~~~L 836 (861)
+|+||++ +..|++++.+. ++|++.|
T Consensus 224 ----------~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 224 ----------SVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp ----------EEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred ----------EEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 7899987 47888887543 6677654
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-23 Score=216.53 Aligned_cols=195 Identities=27% Similarity=0.335 Sum_probs=148.4
Q ss_pred EEEecCCccccCCCCCC-CCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEE
Q 002984 593 AIFLDYDGTVVPETSII-KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWE 671 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~-~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~ 671 (861)
+|++|+||||++ .+ ..++++++++|++| ++.|+.++++|||+...+..+++.+ ..+++++||+.++.+++..|.
T Consensus 1 li~~D~DgTL~~---~~~~~~~~~~~~~l~~l-~~~g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLD---PNAHELSPETIEALERL-REAGVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcC---CCCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEE
Confidence 589999999998 55 78999999999999 5788999999999999999999775 478999999999988777776
Q ss_pred ecCCccChHHH---HHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcC-CCEEEE-EcC
Q 002984 672 TNHLGADLEWK---KIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLAN-EPAVVK-RGQ 746 (861)
Q Consensus 672 ~~~~~~~~~w~---~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~-~~~~v~-~g~ 746 (861)
.. ......|. +.+..++..+...+++..++.+.....+++..... ......++.+.++....+ ..+.+. ++.
T Consensus 76 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 152 (204)
T TIGR01484 76 EP-SDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAEL--GQELDSKMRERLEKIGRNDLELEAIYVGK 152 (204)
T ss_pred cc-cccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccch--hhHHHHHHHHHHHhhccccCcEEEEEecC
Confidence 41 11111121 22223344445566777788888889998876411 111223444444433221 335566 799
Q ss_pred eEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002984 747 HIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 747 ~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
.++||+|++++|+.+++.+++++ +++++++++|||+.||++||+.++.+
T Consensus 153 ~~~ev~p~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~~~~~ 201 (204)
T TIGR01484 153 TDLEVLPAGVDKGSALQALLKEL---NGKRDEILAFGDSGNDEEMFEVAGLA 201 (204)
T ss_pred CEEEEecCCCChHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999999 99999999999999999999999874
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.1e-23 Score=220.97 Aligned_cols=224 Identities=19% Similarity=0.208 Sum_probs=149.5
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeC--C
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWN--K 666 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~--~ 666 (861)
++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||++..+...+..+. ..++++.||+.+... +
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~ 77 (272)
T PRK10530 2 TYRVIALDLDGTLLT---PKKTILPESLEALARA-REAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAK 77 (272)
T ss_pred CccEEEEeCCCceEC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCC
Confidence 479999999999999 7888999999999999 79999999999999999999887764 235899999999863 3
Q ss_pred cceEEecCCccChHHHHHHHHHHHHHhhcC--------CCceEeeccc----eeEee----------eccCCc-------
Q 002984 667 TSEWETNHLGADLEWKKIVEPVMRSYTEAT--------DGSNIEIKES----ALVWH----------HQDADP------- 717 (861)
Q Consensus 667 ~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~--------~gs~ie~k~~----~l~~~----------~~~~d~------- 717 (861)
...+...++. +.+..+++...+.. .+.+...... ...|. +...+.
T Consensus 78 ~~l~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (272)
T PRK10530 78 KVLEADPLPV------QQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQ 151 (272)
T ss_pred EEEEecCCCH------HHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhh
Confidence 3344444432 23333333322110 0111110000 00000 000000
Q ss_pred ---c--chhc-cHHHHHHHHHHHh-cCCCE-EEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchH
Q 002984 718 ---D--FGSC-QAKELLDHLESVL-ANEPA-VVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDE 789 (861)
Q Consensus 718 ---~--~~~~-~a~el~~~L~~~l-~~~~~-~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~ 789 (861)
. +... ...+..+.+.+.+ ..... .+.++..++|+.|++++||.|++++++++ |++++++++|||+.||+
T Consensus 152 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~---gi~~~e~i~~GD~~NDi 228 (272)
T PRK10530 152 VNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQ---GWSMKNVVAFGDNFNDI 228 (272)
T ss_pred cCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHeEEeCCChhhH
Confidence 0 0000 0001112222222 22222 23445568999999999999999999999 99999999999999999
Q ss_pred HHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecC--CHhHHHHHHHHHH
Q 002984 790 DMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLD--DATDVLKLLQGLA 840 (861)
Q Consensus 790 ~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~--d~~eV~~~L~~L~ 840 (861)
+||+.+|. +|+||++ +..|+|+++ +.++|.++|+.+.
T Consensus 229 ~m~~~ag~--------------~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 229 SMLEAAGL--------------GVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred HHHHhcCc--------------eEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 99999996 6888886 367888874 5678999998764
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-22 Score=226.40 Aligned_cols=269 Identities=20% Similarity=0.280 Sum_probs=197.3
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhC
Q 002984 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLG 278 (861)
Q Consensus 199 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg 278 (861)
+|+|+||+. +.+-..+++++|++++.+.+|..|. .+. ++ .++.|-+.+. +.+.++.. ..
T Consensus 100 ~~vi~v~~~--~~~~~~~~~~~~~~~~v~~~h~~~~-~~~----------~~---~~~~ii~~S~-~~~~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNS--MKLYRQIRERAPQAKLVMHMHNAFE-PEL----------LD---KNAKIIVPSQ-FLKKFYEE---RL- 158 (380)
T ss_pred CcEEEEeCc--HHhHHHHHhhCCCCCEEEEEecccC-hhH----------hc---cCCEEEEcCH-HHHHHHHh---hC-
Confidence 599999973 3455667888999999999997762 111 11 3566666654 44444331 00
Q ss_pred CccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccccCHHHHHHH
Q 002984 279 LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGISLKLLA 355 (861)
Q Consensus 279 ~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi~~~l~A 355 (861)
...++.++|+|||...|... .. ..+++++ .++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~-----~~---~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSN-----PQ---PNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCc-----ch---HHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 01235789999998877421 11 1233343 367899999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccce
Q 002984 356 MEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCI 435 (861)
Q Consensus 356 f~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~v 435 (861)
+.++.+++|+++ |+++|.+......+..++++++.+++.+.+ ..+.+.+.++.+++..+|+.||+||
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~---------~~v~~~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIG---------DRCIMLGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcC---------CcEEEeCCCCHHHHHHHHHhCCEEE
Confidence 999999999876 888886543222233456667776665542 1235778899999999999999999
Q ss_pred eccc-ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---Cce-EeCCCCHHHHHHHHHHHh
Q 002984 436 VNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAI-RVNPWDIDAVADAMTLAI 510 (861)
Q Consensus 436 vtS~-~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai-~vnP~d~~~~A~ai~~aL 510 (861)
+||. .||||++++||||| |.|+|+|..+|+.+.+. .|+ +++|.|++++|++|.+++
T Consensus 282 ~pS~~~E~f~~~~lEAma~-------------------G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll 342 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAA-------------------GKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL 342 (380)
T ss_pred eCCCCccccccHHHHHHHc-------------------CCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH
Confidence 9997 59999999999999 45689999988887773 355 678999999999999999
Q ss_pred cCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHHHHHHH
Q 002984 511 NMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLER 546 (861)
Q Consensus 511 ~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 546 (861)
+.++ +..+.++.++++ ..+++...++++++.++.
T Consensus 343 ~d~~--~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 343 ADPE--LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred cCHH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 8664 344556666554 668999999988887765
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.90 E-value=6e-22 Score=235.86 Aligned_cols=319 Identities=15% Similarity=0.145 Sum_probs=215.2
Q ss_pred hHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccccHHHHHHhh-----cCCCeEEEEEecC-----CCChHHHhc--C
Q 002984 176 LWQAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKR-----FNRIKLGFFLHSP-----FPSSEIYRT--L 242 (861)
Q Consensus 176 ~w~~Y~~vN~~fa~~v~~~-~~p~~D~VwvhDyhl~llp~~lr~~-----~~~~~i~~flH~P-----fP~~e~f~~--l 242 (861)
+...|.-+.+..++-+... .+| |+|++||+|-.++|.++.+. +.++++.|.+|-= ||... +.. +
T Consensus 589 n~~RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~-l~~lGL 665 (977)
T PLN02939 589 DFKRFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASD-LASCGL 665 (977)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHH-HHHcCC
Confidence 3444555556665555443 356 89999999999985544432 4568999999953 33222 221 2
Q ss_pred Cc---------------hHH-HHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccC
Q 002984 243 PV---------------RDE-ILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGV 306 (861)
Q Consensus 243 p~---------------r~~-il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GI 306 (861)
|+ +-. +.-|+..||.|-.-++.|++.-+. .---|++. .+..+..++.++|+||
T Consensus 666 ~~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGI 734 (977)
T PLN02939 666 DVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGI 734 (977)
T ss_pred CHHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEecce
Confidence 21 111 234677799998889999887654 11011110 1123445778899999
Q ss_pred CchHHHHhhCC-------c----hhHHHHHHHHHHcC------CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCc
Q 002984 307 HMGRLESVLNL-------P----ATATKIKEIEKQFD------GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGK 369 (861)
Q Consensus 307 d~~~~~~~~~~-------~----~~~~~~~~l~~~~~------~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~ 369 (861)
|.+.|.+.... . ........+++++. +.++|++|+|+.+.||+..++.|+.++++ ++
T Consensus 735 D~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d---- 808 (977)
T PLN02939 735 DTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG---- 808 (977)
T ss_pred ehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----
Confidence 99988643210 0 00112345677762 35899999999999999999999998875 33
Q ss_pred EEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCccee
Q 002984 370 VVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYK 449 (861)
Q Consensus 370 vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~E 449 (861)
+.||++|. |++ ..+++++.+++.+.+ . .+.+.|.+.++......+|+.||+||+||.+|||||+++|
T Consensus 809 vqLVIvGd-----Gp~-~~~e~eL~~La~~l~----l---~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLE 875 (977)
T PLN02939 809 GQFVLLGS-----SPV-PHIQREFEGIADQFQ----S---NNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMI 875 (977)
T ss_pred CEEEEEeC-----CCc-HHHHHHHHHHHHHcC----C---CCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHH
Confidence 34888883 322 234556666665542 1 2345566677777788999999999999999999999999
Q ss_pred eeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC------------CceEeCCCCHHHHHHHHHHHhcC---CH
Q 002984 450 YIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS------------GAIRVNPWDIDAVADAMTLAINM---RD 514 (861)
Q Consensus 450 a~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------------~ai~vnP~d~~~~A~ai~~aL~m---~~ 514 (861)
||+| |.|+|++..+|+.+.+. +|++++|.|+++++++|.+++.. .+
T Consensus 876 AMAy-------------------GtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dp 936 (977)
T PLN02939 876 AMRY-------------------GSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKP 936 (977)
T ss_pred HHHC-------------------CCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCH
Confidence 9999 56789999999887662 48999999999999999999862 34
Q ss_pred HHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHHH
Q 002984 515 SEKQLRHEKHYRYVSTHDVAYWARSFAQDLERAC 548 (861)
Q Consensus 515 ~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 548 (861)
+.++.+.++. ....+++...++.+.+-..++.
T Consensus 937 e~~~~L~~~a--m~~dFSWe~~A~qYeeLY~~ll 968 (977)
T PLN02939 937 EVWKQLVQKD--MNIDFSWDSSASQYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 4443333322 2356889999988877666554
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.5e-22 Score=239.30 Aligned_cols=310 Identities=13% Similarity=0.097 Sum_probs=216.6
Q ss_pred HhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccccHHHHHHhh-----cCCCeEEEEEecCCCChHHHhcCCchHHH
Q 002984 175 VLWQAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKR-----FNRIKLGFFLHSPFPSSEIYRTLPVRDEI 248 (861)
Q Consensus 175 ~~w~~Y~~vN~~fa~~v~~~-~~p~~D~VwvhDyhl~llp~~lr~~-----~~~~~i~~flH~PfP~~e~f~~lp~r~~i 248 (861)
+...-|..+++..++.+... .+| |+|++||.|-.++|.++++. +.+.++.+.+|-.- | .+..+
T Consensus 687 Dd~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~----~~n~l 755 (1036)
T PLN02316 687 NDGERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----F----GANHI 755 (1036)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----c----chhHH
Confidence 34455666666666655433 355 99999999999999999875 35689999999431 1 12235
Q ss_pred HHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCC--c-----h--
Q 002984 249 LRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNL--P-----A-- 319 (861)
Q Consensus 249 l~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~--~-----~-- 319 (861)
-.++..||.|---+..|++..+.. +. + ..+..++.++|+|||++.|.+.... | +
T Consensus 756 k~~l~~AD~ViTVS~tya~EI~~~-----~~----------l--~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~ 818 (1036)
T PLN02316 756 GKAMAYADKATTVSPTYSREVSGN-----SA----------I--APHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENV 818 (1036)
T ss_pred HHHHHHCCEEEeCCHHHHHHHHhc-----cC----------c--ccccCCEEEEECCccccccCCcccccccccCCchhh
Confidence 567788999998888888766541 00 0 1123467789999999887532110 0 0
Q ss_pred ---hHHHHHHHHHHcC----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHH
Q 002984 320 ---TATKIKEIEKQFD----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKE 392 (861)
Q Consensus 320 ---~~~~~~~l~~~~~----~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~ 392 (861)
.......+++++. +.++|++|+||.+.||+..++.|+.++++. + +.||++|. |++ ..++.+
T Consensus 819 ~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~-----Gpd-~~~e~~ 886 (1036)
T PLN02316 819 VEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGS-----APD-PRIQND 886 (1036)
T ss_pred hhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeC-----CCC-HHHHHH
Confidence 0122345667662 578999999999999999999999999863 3 34777773 333 345667
Q ss_pred HHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCC
Q 002984 393 TYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPH 472 (861)
Q Consensus 393 v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~ 472 (861)
+.+++.++...+. ..+.|.+..+......+|++||+||+||..|||||+.+|||+|
T Consensus 887 l~~La~~Lg~~~~-----~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~------------------- 942 (1036)
T PLN02316 887 FVNLANQLHSSHH-----DRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRY------------------- 942 (1036)
T ss_pred HHHHHHHhCccCC-----CeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHc-------------------
Confidence 7777776644332 2334444444444458999999999999999999999999999
Q ss_pred CceEEeccCCCCcccC-C---------------CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhH
Q 002984 473 TSMLVVSEFIGCSPSL-S---------------GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAY 535 (861)
Q Consensus 473 ~g~lV~Se~~G~~~~l-~---------------~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~ 535 (861)
|.|+|++..+|..+.+ + .|++|+|.|++++++||.++|......+....+..++.+ ..+++..
T Consensus 943 GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~ 1022 (1036)
T PLN02316 943 GSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNR 1022 (1036)
T ss_pred CCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHH
Confidence 4568999999999887 2 389999999999999999999864332333233334443 4588888
Q ss_pred HHHHHHHHHHHHH
Q 002984 536 WARSFAQDLERAC 548 (861)
Q Consensus 536 W~~~fl~~l~~~~ 548 (861)
-++++++-..++.
T Consensus 1023 ~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 1023 PALDYMELYHSAR 1035 (1036)
T ss_pred HHHHHHHHHHHHh
Confidence 8888876665543
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.1e-22 Score=229.16 Aligned_cols=316 Identities=16% Similarity=0.118 Sum_probs=196.3
Q ss_pred hHHHHHHHHHHHHHHHHHHc-CCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChH--HH---------h---
Q 002984 176 LWQAYVSANKIFADKVMEVI-NPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE--IY---------R--- 240 (861)
Q Consensus 176 ~w~~Y~~vN~~fa~~v~~~~-~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e--~f---------~--- 240 (861)
.|.....+...+.+.+.+.. +| |+|++|+++--++..++++.. +.|+.+..|....... +. .
T Consensus 93 ~~~~~~~~~~~l~~~~~~~~~~~--DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~ 169 (439)
T TIGR02472 93 LWPYLDELADNLLQHLRQQGHLP--DLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQY 169 (439)
T ss_pred hhhhHHHHHHHHHHHHHHcCCCC--CEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhc
Confidence 34444445555555444332 45 999999987666666665544 5789999997532211 00 0
Q ss_pred cCCchHH-HHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCch
Q 002984 241 TLPVRDE-ILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPA 319 (861)
Q Consensus 241 ~lp~r~~-il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~ 319 (861)
.++.+-. -...+..+|.|-..+...++.-+. .. .+-...++.++|+|||++.|.+....+.
T Consensus 170 ~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~---~~---------------~~~~~~ki~vIpnGvd~~~f~~~~~~~~ 231 (439)
T TIGR02472 170 NISRRIEAEEETLAHASLVITSTHQEIEEQYA---LY---------------DSYQPERMQVIPPGVDLSRFYPPQSSEE 231 (439)
T ss_pred chHHHHHHHHHHHHhCCEEEECCHHHHHHHHH---hc---------------cCCCccceEEECCCcChhhcCCCCcccc
Confidence 0011100 112233456554444322211110 00 0012346788999999998864322111
Q ss_pred hHHHHHHHHHHc--CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHH----HHHHHH
Q 002984 320 TATKIKEIEKQF--DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQ----EAKKET 393 (861)
Q Consensus 320 ~~~~~~~l~~~~--~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~----~~~~~v 393 (861)
.......+++.. .++++|++|+|+++.||+..+|+||.++.+..+.. ++++ .+|... ..+.++ ++.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~--~~~~l~~~~~~~~~~~ 306 (439)
T TIGR02472 232 TSEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRD--DIRKMESQQREVLQKV 306 (439)
T ss_pred chhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCcc--ccccccHHHHHHHHHH
Confidence 111111222221 46789999999999999999999998643221111 2322 234211 111111 122233
Q ss_pred HHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhc----ccceecccccCCCCcceeeeeeecCCCcccccccCCCC
Q 002984 394 YLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVA----ECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERD 469 (861)
Q Consensus 394 ~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~A----Dv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~ 469 (861)
..++++ .+....+.|.+.++.+++.++|+.| |+||+||.+||||++++|||||
T Consensus 307 ~~~~~~-------~~l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~---------------- 363 (439)
T TIGR02472 307 LLLIDR-------YDLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAAC---------------- 363 (439)
T ss_pred HHHHHH-------cCCCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHh----------------
Confidence 333433 2344567788899999999999988 9999999999999999999999
Q ss_pred CCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhc-cCCHhHHHHHHHHHH
Q 002984 470 SPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWARSFAQDL 544 (861)
Q Consensus 470 ~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~fl~~l 544 (861)
+.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++++. +++++.+.++.++++. .+++..-++++++-|
T Consensus 364 ---G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 364 ---GLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSD-SSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred ---CCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 55699999999888873 48999999999999999999984 4556666777777664 578888888777644
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-22 Score=215.53 Aligned_cols=216 Identities=21% Similarity=0.262 Sum_probs=146.2
Q ss_pred EEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccC-CceEecCcEEEEeCC-cceE
Q 002984 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM-LGIAAEHGYFIRWNK-TSEW 670 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~-lgliaenG~~i~~~~-~~~~ 670 (861)
+|++|+||||++ .++.++++++++|+++ +++|+.|+|+|||++..+...+..+.. .++|+.||+.+...+ ..++
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~ 76 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKL-REKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILY 76 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEe
Confidence 589999999999 7788999999999999 789999999999999999998877653 379999999998764 4455
Q ss_pred EecCCccChHHHHHHHHHHHHHhhcC--------CCceEeeccce-eEee----ec------cC----Cccch---hccH
Q 002984 671 ETNHLGADLEWKKIVEPVMRSYTEAT--------DGSNIEIKESA-LVWH----HQ------DA----DPDFG---SCQA 724 (861)
Q Consensus 671 ~~~~~~~~~~w~~~v~~i~~~y~~~~--------~gs~ie~k~~~-l~~~----~~------~~----d~~~~---~~~a 724 (861)
...++. +.+..+++...+.. .+.++...... .... +. +. +..+. ....
T Consensus 77 ~~~i~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T TIGR00099 77 KKPLDL------DLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLD 150 (256)
T ss_pred ecCCCH------HHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECC
Confidence 555442 33334443332211 11222111000 0000 00 00 00000 0011
Q ss_pred HHHHHHHHHHhc-----CCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccC
Q 002984 725 KELLDHLESVLA-----NEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTV 799 (861)
Q Consensus 725 ~el~~~L~~~l~-----~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 799 (861)
.+..+.+.+.+. .....+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~---~~~~~~~~~~GD~~nD~~m~~~~~~-- 225 (256)
T TIGR00099 151 PEDLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEAL---GISLEDVIAFGDGMNDIEMLEAAGY-- 225 (256)
T ss_pred HHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHc---CCCHHHEEEeCCcHHhHHHHHhCCc--
Confidence 122233333332 222345677889999999999999999999999 9999999999999999999999986
Q ss_pred CCCCCCCCCceEEEEeCCC----CcccceecC--CHhHHHHH
Q 002984 800 SGPSLPVPPEIFACTVGRK----PSKAKYYLD--DATDVLKL 835 (861)
Q Consensus 800 ~~~~~~~~~~~~av~vG~~----~s~Aky~l~--d~~eV~~~ 835 (861)
+|+||++ +..|+|++. +.++|.++
T Consensus 226 ------------~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 226 ------------GVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ------------eeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 6788876 366888875 35667654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.2e-22 Score=229.04 Aligned_cols=293 Identities=18% Similarity=0.220 Sum_probs=193.0
Q ss_pred CEEEEeCcccccHHHHHHhhc----CCCeEEEEEecCCC----ChHHHhcC--Cc-------------hHHHHHHhhcCC
Q 002984 200 DCVWVHDYHLMVLPTFLRKRF----NRIKLGFFLHSPFP----SSEIYRTL--PV-------------RDEILRGLLNCD 256 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~~----~~~~i~~flH~PfP----~~e~f~~l--p~-------------r~~il~~ll~~d 256 (861)
|+|++||+|--++|.++++++ .+.++.++.|..-. ..+.+..+ |+ ..-+..++..||
T Consensus 120 DiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 199 (466)
T PRK00654 120 DIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYAD 199 (466)
T ss_pred ceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcC
Confidence 999999999999999998663 46899999997521 11111111 11 111223455666
Q ss_pred EEeecChHhHHHHHHHHHHHhCCccccCCCeeeE--EecCeEEEEEEecccCCchHHHHhhCC-------c----hhHHH
Q 002984 257 LIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGL--DYFGRTVYIKILPVGVHMGRLESVLNL-------P----ATATK 323 (861)
Q Consensus 257 ligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~--~~~gr~~~i~v~p~GId~~~~~~~~~~-------~----~~~~~ 323 (861)
.|--.+..|++..... ..| . ++ .+..+..++.++|+|||.+.|.+.... + .....
T Consensus 200 ~vitvS~~~~~ei~~~---~~~------~---gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~ 267 (466)
T PRK00654 200 RVTTVSPTYAREITTP---EFG------Y---GLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAEN 267 (466)
T ss_pred cCeeeCHHHHHHhccc---cCC------c---ChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHH
Confidence 6665565555433210 000 0 00 001123468889999999988642110 0 01122
Q ss_pred HHHHHHHcC----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHH
Q 002984 324 IKEIEKQFD----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKR 399 (861)
Q Consensus 324 ~~~l~~~~~----~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~ 399 (861)
.+.+++++. +.++|++|||+++.||+..+++|+++++++ + +.|+.+|.+ + ..+++++++++++
T Consensus 268 k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~g-----~--~~~~~~l~~l~~~ 334 (466)
T PRK00654 268 KRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGTG-----D--PELEEAFRALAAR 334 (466)
T ss_pred HHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEecC-----c--HHHHHHHHHHHHH
Confidence 345666662 568999999999999999999999998764 3 448877742 1 1244555556554
Q ss_pred HhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec
Q 002984 400 INEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS 479 (861)
Q Consensus 400 IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S 479 (861)
.+ . .++++.+. +.+....+|+.||+||+||.+||||++.+|||+| +.|+|+|
T Consensus 335 ~~----~----~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~-------------------G~p~V~~ 386 (466)
T PRK00654 335 YP----G----KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRY-------------------GTLPIVR 386 (466)
T ss_pred CC----C----cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHC-------------------CCCEEEe
Confidence 32 1 24445544 5566779999999999999999999999999999 5668999
Q ss_pred cCCCCcccC-C--------CceEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHH
Q 002984 480 EFIGCSPSL-S--------GAIRVNPWDIDAVADAMTLAINM--RDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (861)
Q Consensus 480 e~~G~~~~l-~--------~ai~vnP~d~~~~A~ai~~aL~m--~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 547 (861)
..+|+.+.+ + .|++|+|.|+++++++|.++++. .++.++.+.++.. ...+++..-++++++-..++
T Consensus 387 ~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 387 RTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 999999887 2 38999999999999999999863 2222322222222 24678888888777655554
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-22 Score=211.20 Aligned_cols=210 Identities=19% Similarity=0.215 Sum_probs=143.3
Q ss_pred EEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCc--ceE
Q 002984 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKT--SEW 670 (861)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~--~~~ 670 (861)
|++|+||||++ +++.+++++.++|+++ +++|+.|+++|||++..+..++..+. ..+++++||+.+...+. ..|
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~ 76 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKA-ESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIF 76 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEE
Confidence 68999999999 7788999999999999 89999999999999999998887765 45699999999988653 345
Q ss_pred EecCCccChHHHHHH-HHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEE
Q 002984 671 ETNHLGADLEWKKIV-EPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIV 749 (861)
Q Consensus 671 ~~~~~~~~~~w~~~v-~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~v 749 (861)
..... ..|.... ......+.. ..-.+ .. ...........++ +....+.+.+.. ...+.++..++
T Consensus 77 ~~~~~---~~~~~~~~~~~~~~~~~-~~~~~-~~-~~~~~~~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~ 141 (225)
T TIGR01482 77 LAYLE---EEWFLDIVIAKTFPFSR-LKVQY-PR-RASLVKMRYGIDV--------DTVREIIKELGL-NLVAVDSGFDI 141 (225)
T ss_pred ecccC---HHHHHHHHHhcccchhh-hcccc-cc-ccceEEEeecCCH--------HHHHHHHHhcCc-eEEEecCCcEE
Confidence 44332 2232211 110000000 00000 00 0000000000111 112222222221 12333566799
Q ss_pred EEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Cccccee
Q 002984 750 EVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYY 825 (861)
Q Consensus 750 EI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~ 825 (861)
||.|++++||.+++++++++ |++++++++|||+.||++||+.+|. +++|||+ +..|+|+
T Consensus 142 ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~--------------~vam~Na~~~~k~~A~~v 204 (225)
T TIGR01482 142 HILPQGVNKGVAVKKLKEKL---GIKPGETLVCGDSENDIDLFEVPGF--------------GVAVANAQPELKEWADYV 204 (225)
T ss_pred EEeeCCCCHHHHHHHHHHHh---CCCHHHEEEECCCHhhHHHHHhcCc--------------eEEcCChhHHHHHhcCee
Confidence 99999999999999999999 9999999999999999999999986 7888886 4778888
Q ss_pred cC--CHhH----HHHHHHHH
Q 002984 826 LD--DATD----VLKLLQGL 839 (861)
Q Consensus 826 l~--d~~e----V~~~L~~L 839 (861)
+. +.++ |.+.|+++
T Consensus 205 t~~~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 205 TESPYGEGGAEAIGEILQAI 224 (225)
T ss_pred cCCCCCCcHHHHHHHHHHhh
Confidence 74 4566 88888765
|
catalyze the same reaction as SPP. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.2e-22 Score=207.53 Aligned_cols=207 Identities=19% Similarity=0.256 Sum_probs=141.1
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCC-ceEecCcEEEEeCCcce
Q 002984 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML-GIAAEHGYFIRWNKTSE 669 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l-gliaenG~~i~~~~~~~ 669 (861)
+|+|++|+||||++ .++.+++++.++|++| +++|+.|+++|||++..+..++..++.. +++++||+.+...+...
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKA-EKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 47999999999999 7888999999999999 7999999999999999999988777543 68999999999865433
Q ss_pred EEecCCccChHHH-HHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeE
Q 002984 670 WETNHLGADLEWK-KIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHI 748 (861)
Q Consensus 670 ~~~~~~~~~~~w~-~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~ 748 (861)
.... . ...|. ...... .+....-...+ ......+... .+ ....+.+.+ ......+..+...
T Consensus 77 ~~~~--~-~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~--~~-----~~~~~~~~l----~~~~~~~~~~~~~ 138 (215)
T TIGR01487 77 FLAN--M-EEEWFLDEEKKK--RFPRDRLSNEY--PRASLVIMRE--GK-----DVDEVREII----KERGLNLVDSGFA 138 (215)
T ss_pred EEec--c-cchhhHHHhhhh--hhhhhhccccc--ceeEEEEecC--Cc-----cHHHHHHHH----HhCCeEEEecCce
Confidence 1111 1 11111 000000 01000000000 0001111110 00 112222233 2234444555678
Q ss_pred EEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Ccccce
Q 002984 749 VEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKY 824 (861)
Q Consensus 749 vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky 824 (861)
+||.|.+++||.+++++++++ |++++++++|||+.||++||+.+|. +|+|||+ +..|+|
T Consensus 139 ~ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~iGDs~ND~~ml~~ag~--------------~vam~na~~~~k~~A~~ 201 (215)
T TIGR01487 139 IHIMKKGVDKGVGVEKLKELL---GIKPEEVAAIGDSENDIDLFRVVGF--------------KVAVANADDQLKEIADY 201 (215)
T ss_pred EEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHhCCC--------------eEEcCCccHHHHHhCCE
Confidence 999999999999999999999 9999999999999999999999986 7888886 467888
Q ss_pred ecC--CHhHHHHHH
Q 002984 825 YLD--DATDVLKLL 836 (861)
Q Consensus 825 ~l~--d~~eV~~~L 836 (861)
++. +.++|.++|
T Consensus 202 v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 202 VTSNPYGEGVVEVL 215 (215)
T ss_pred EcCCCCCchhhhhC
Confidence 875 356666543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.8e-22 Score=229.94 Aligned_cols=319 Identities=15% Similarity=0.150 Sum_probs=213.1
Q ss_pred HhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccccHHHHHHhhc------CCCeEEEEEecCC-----CChHHHhcC
Q 002984 175 VLWQAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKRF------NRIKLGFFLHSPF-----PSSEIYRTL 242 (861)
Q Consensus 175 ~~w~~Y~~vN~~fa~~v~~~-~~p~~D~VwvhDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~f~~l 242 (861)
+....|.-.++..++.+.+. ++| |+|++||+|-.++|.+++++. .++|+.+..|... |....-..+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 34567777777777766542 356 999999999999999998764 4789999999742 221111113
Q ss_pred Cch------------HHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchH
Q 002984 243 PVR------------DEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGR 310 (861)
Q Consensus 243 p~r------------~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~ 310 (861)
|+. .-+-.++..||.|---++.|++.-.+....-.|++. ....+..++.++|+|||.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---------~l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---------VLEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---------HHHhcCCCeeEEeCCccccc
Confidence 321 123345677787777777777654320000001100 00113456788999999998
Q ss_pred HHHhhCCc-----------hhHHHHHHHHHHc-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 002984 311 LESVLNLP-----------ATATKIKEIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (861)
Q Consensus 311 ~~~~~~~~-----------~~~~~~~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvq 374 (861)
|.+..... ........+++++ +++++|++|+|+.+.||+..+++|+.++++. + +.|++
T Consensus 268 ~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvi 341 (489)
T PRK14098 268 WNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVI 341 (489)
T ss_pred cCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEE
Confidence 86432100 0011233455554 3567999999999999999999999998752 3 45888
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeee
Q 002984 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (861)
Q Consensus 375 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~ 454 (861)
+|. |+ ..+++++++++++. + ..+.+.+.++.+++..+|+.||+||+||..||||++.+|||+|
T Consensus 342 vG~-----G~--~~~~~~l~~l~~~~----~-----~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~- 404 (489)
T PRK14098 342 CGS-----GD--KEYEKRFQDFAEEH----P-----EQVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSY- 404 (489)
T ss_pred EeC-----CC--HHHHHHHHHHHHHC----C-----CCEEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhC-
Confidence 884 22 12445555555542 1 1345566788999999999999999999999999999999999
Q ss_pred cCCCcccccccCCCCCCCCceEEeccCCCCcccCC-------CceEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHHHhh
Q 002984 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-------GAIRVNPWDIDAVADAMTLAINM--RDSEKQLRHEKHY 525 (861)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-------~ai~vnP~d~~~~A~ai~~aL~m--~~~e~~~r~~~~~ 525 (861)
+.|+|++..+|+.+.+. .|++++|.|++++|++|.+++.+ .++.++...++.
T Consensus 405 ------------------G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~- 465 (489)
T PRK14098 405 ------------------GTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA- 465 (489)
T ss_pred ------------------CCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH-
Confidence 55689999999887762 48999999999999999998743 222222222211
Q ss_pred hhhccCCHhHHHHHHHHHHHHH
Q 002984 526 RYVSTHDVAYWARSFAQDLERA 547 (861)
Q Consensus 526 ~~v~~~~~~~W~~~fl~~l~~~ 547 (861)
....+++..-++++++-.+++
T Consensus 466 -~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 466 -MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred -hcCCCChHHHHHHHHHHHHHH
Confidence 235678888888877655544
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-21 Score=227.08 Aligned_cols=310 Identities=17% Similarity=0.202 Sum_probs=204.7
Q ss_pred HHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccccHHHHHHhhcC--CCeEEEEEecCCC----ChHHHhcCCchH-----
Q 002984 179 AYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKRFN--RIKLGFFLHSPFP----SSEIYRTLPVRD----- 246 (861)
Q Consensus 179 ~Y~~vN~~fa~~v~~~-~~p~~D~VwvhDyhl~llp~~lr~~~~--~~~i~~flH~PfP----~~e~f~~lp~r~----- 246 (861)
.|...++..++.+... .+| |+|++||+|-.++|.++++.+. ++|+.+..|...+ ..+.+..+....
T Consensus 110 r~~~f~~a~~~~~~~~~~~~--DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~ 187 (473)
T TIGR02095 110 RFAFFSRAAAELLSGLGWQP--DVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHM 187 (473)
T ss_pred HHHHHHHHHHHHHHhcCCCC--CEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCc
Confidence 3444444444444321 345 8999999999999999988765 3899999997642 122222222110
Q ss_pred ----------HHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEE--ecCeEEEEEEecccCCchHHHHh
Q 002984 247 ----------EILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD--YFGRTVYIKILPVGVHMGRLESV 314 (861)
Q Consensus 247 ----------~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--~~gr~~~i~v~p~GId~~~~~~~ 314 (861)
-+..++..||.|-..+..|++..... ..|. +++ +..+..++.++|+|||.+.|.+.
T Consensus 188 ~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~ 255 (473)
T TIGR02095 188 EGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPA 255 (473)
T ss_pred hhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCC
Confidence 12335556666666666665544321 0000 010 01133467889999999988632
Q ss_pred hCCc-----------hhHHHHHHHHHHcC-----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 002984 315 LNLP-----------ATATKIKEIEKQFD-----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNP 378 (861)
Q Consensus 315 ~~~~-----------~~~~~~~~l~~~~~-----~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p 378 (861)
.... ........+++++. ++++|++|||+.+.||+..+++|++++.++. +.|+.+|..
T Consensus 256 ~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g 329 (473)
T TIGR02095 256 TDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTG 329 (473)
T ss_pred CCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCC
Confidence 1100 01122345666662 6789999999999999999999999987642 448888742
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCC
Q 002984 379 ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458 (861)
Q Consensus 379 ~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~ 458 (861)
+ +++++++.+++.+. +. .++ +....+.+++..+|+.||++++||..||||++.+|||+|
T Consensus 330 -----~--~~~~~~l~~~~~~~----~~----~v~-~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~----- 388 (473)
T TIGR02095 330 -----D--PELEEALRELAERY----PG----NVR-VIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRY----- 388 (473)
T ss_pred -----C--HHHHHHHHHHHHHC----CC----cEE-EEEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHC-----
Confidence 1 23455566655432 21 133 334567888899999999999999999999999999999
Q ss_pred cccccccCCCCCCCCceEEeccCCCCcccCC---------CceEeCCCCHHHHHHHHHHHhcC---CHHHHHHHHHHhhh
Q 002984 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSLS---------GAIRVNPWDIDAVADAMTLAINM---RDSEKQLRHEKHYR 526 (861)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---------~ai~vnP~d~~~~A~ai~~aL~m---~~~e~~~r~~~~~~ 526 (861)
+.|+|+|..+|..+.+. .|++++|.|++++|++|.+++.+ .++.++.+.++..
T Consensus 389 --------------G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~- 453 (473)
T TIGR02095 389 --------------GTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM- 453 (473)
T ss_pred --------------CCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh-
Confidence 55799999999998882 37999999999999999999874 3333333333322
Q ss_pred hhccCCHhHHHHHHHHHHH
Q 002984 527 YVSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 527 ~v~~~~~~~W~~~fl~~l~ 545 (861)
...+++...++++++-.+
T Consensus 454 -~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 454 -SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred -ccCCCcHHHHHHHHHHHH
Confidence 246788888887765443
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=222.32 Aligned_cols=300 Identities=15% Similarity=0.143 Sum_probs=201.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCC--hHH-Hh-cCCc--------hH
Q 002984 179 AYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPS--SEI-YR-TLPV--------RD 246 (861)
Q Consensus 179 ~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~--~e~-f~-~lp~--------r~ 246 (861)
....+-+.......+.++| |+|+.| +.+....+|++.+|++++..++|..+-. .+. |. ..+. +.
T Consensus 70 ~~~~~~~~~~~~~~~~~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (396)
T cd03818 70 RGQAVARALLALRAKGFRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRN 145 (396)
T ss_pred HHHHHHHHHHHHHhcCCCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHH
Confidence 3344433333333444567 899999 6777778899999999998888744311 110 10 1111 11
Q ss_pred H---HHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHH
Q 002984 247 E---ILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATK 323 (861)
Q Consensus 247 ~---il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~ 323 (861)
. ++..+-.||.+-..+....+.|.. ... .++.++|+|||.+.|.+.. ..
T Consensus 146 ~~~~~~~~~~~ad~vi~~s~~~~~~~~~--------------------~~~--~ki~vI~ngvd~~~f~~~~---~~--- 197 (396)
T cd03818 146 RNALILLALAQADAGVSPTRWQRSTFPA--------------------ELR--SRISVIHDGIDTDRLRPDP---QA--- 197 (396)
T ss_pred hhhHhHHHHHhCCEEECCCHHHHhhCcH--------------------hhc--cceEEeCCCccccccCCCc---hh---
Confidence 1 234566777777666543333221 011 3578899999998885321 11
Q ss_pred HHHHHHH---cCCCeEEEeecC-cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhH---HHHHHHHHHHH
Q 002984 324 IKEIEKQ---FDGKKLILGIDD-MDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKD---VQEAKKETYLT 396 (861)
Q Consensus 324 ~~~l~~~---~~~~~vil~Vdr-ld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~---~~~~~~~v~~l 396 (861)
...++.. ..++++|++++| +.+.||+..+++|+.++.+++|+++ |+.+|......+.. ..++++ ++
T Consensus 198 ~~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~---~~ 270 (396)
T cd03818 198 RLRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQ---HM 270 (396)
T ss_pred hhcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHH---HH
Confidence 1111111 146789999998 9999999999999999999999877 88888532111110 011121 22
Q ss_pred HHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceE
Q 002984 397 AKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSML 476 (861)
Q Consensus 397 ~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~l 476 (861)
.++++.+.+ .+.+.|.|.++.+++.++|+.||++|+||..||+|++++||||| +.|+
T Consensus 271 ~~~~~~~~~----~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~-------------------G~PV 327 (396)
T cd03818 271 LDELGGRLD----LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMAC-------------------GCLV 327 (396)
T ss_pred HHHhhcccC----cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHC-------------------CCCE
Confidence 222222221 13566788999999999999999999999999999999999999 5569
Q ss_pred EeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhcc-CCHhHHHHHHH
Q 002984 477 VVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFA 541 (861)
Q Consensus 477 V~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~fl 541 (861)
|+|..+|..+.+. .|++++|.|++++|++|.++++.+ +++....++.++++.+ +++...+++++
T Consensus 328 Ias~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 328 VGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred EEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 9999988888883 489999999999999999999854 5566667777777766 77666666554
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=209.11 Aligned_cols=220 Identities=16% Similarity=0.082 Sum_probs=145.5
Q ss_pred EEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCcce--
Q 002984 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE-- 669 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~~~-- 669 (861)
+|++|+||||++ .++...+.++++|+++ ++.|+.|+++|||+...+..++..+. ..++|++||++|...++..
T Consensus 1 li~~DlDGTll~---~~~~~~~~~~~~i~~l-~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~ 76 (256)
T TIGR01486 1 WIFTDLDGTLLD---PHGYDWGPAKEVLERL-QELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTE 76 (256)
T ss_pred CEEEcCCCCCcC---CCCcCchHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccC
Confidence 589999999999 5653445799999999 78999999999999999999997765 3479999999998765421
Q ss_pred ---EEecCCccChHHHHHHHHHHHHHhhcCCCceEe-eccc--------eeEee------eccCCccchhccHHHHHHHH
Q 002984 670 ---WETNHLGADLEWKKIVEPVMRSYTEATDGSNIE-IKES--------ALVWH------HQDADPDFGSCQAKELLDHL 731 (861)
Q Consensus 670 ---~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie-~k~~--------~l~~~------~~~~d~~~~~~~a~el~~~L 731 (861)
|... ....+ +.+..+++.+.+..+..+.. .... .+... ...... .... ..+..+.+
T Consensus 77 ~~~~~~~---~~i~~-~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~ 150 (256)
T TIGR01486 77 PEYPVIA---LGIPY-EKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSE-TILW-SEERRERF 150 (256)
T ss_pred CCeEEEE---cCCCH-HHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCC-ceec-ChHHHHHH
Confidence 1111 11122 34444444332211110000 0000 00000 000000 0001 12334444
Q ss_pred HHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCC--CCeEEEEeCCcchHHHHHHccccCCCCCCCCCCc
Q 002984 732 ESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRP--PDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPE 809 (861)
Q Consensus 732 ~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~--~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~ 809 (861)
.+.+......+..+..++||.|++++||.|++++++++ |++ .+++++|||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~---~i~~~~~~~~a~GD~~ND~~Ml~~ag~------------ 215 (256)
T TIGR01486 151 TEALVELGLEVTHGNRFYHVLGAGSDKGKAANALKQFY---NQPGGAIKVVGLGDSPNDLPLLEVVDL------------ 215 (256)
T ss_pred HHHHHHcCCEEEeCCceEEEecCCCCHHHHHHHHHHHH---hhcCCCceEEEEcCCHhhHHHHHHCCE------------
Confidence 44444444455555679999999999999999999999 998 9999999999999999999996
Q ss_pred eEEEEeCCCC-----cc----cc-eec--CCHhHHHHHHHHH
Q 002984 810 IFACTVGRKP-----SK----AK-YYL--DDATDVLKLLQGL 839 (861)
Q Consensus 810 ~~av~vG~~~-----s~----Ak-y~l--~d~~eV~~~L~~L 839 (861)
+|+|||++ -+ |. |++ ++.++|.+.|+.+
T Consensus 216 --~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 216 --AVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred --EEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 78888764 12 33 666 3578899999876
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-20 Score=215.66 Aligned_cols=286 Identities=16% Similarity=0.149 Sum_probs=206.2
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhc---CCc--hHHHH--HHhhcCCEEeecChHhHHHHHHH
Q 002984 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRT---LPV--RDEIL--RGLLNCDLIGFHTFDYARHFLSC 272 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~---lp~--r~~il--~~ll~~dligF~t~~~~~~Fl~~ 272 (861)
|+|++|++.-.+++.++++ ..+.|+.+.+|..++-...+.. .|. ...++ ..+-.+|.+.+.+...++.+...
T Consensus 103 Diih~h~~~~~~~~~~~~~-~~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~ 181 (405)
T TIGR03449 103 DLIHSHYWLSGQVGWLLRD-RWGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVRH 181 (405)
T ss_pred CeEEechHHHHHHHHHHHH-hcCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHHH
Confidence 9999998665555555554 4468899999965432221111 111 11222 23457899999998877776641
Q ss_pred HHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccccCH
Q 002984 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGI 349 (861)
Q Consensus 273 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi 349 (861)
. + ....++.++|+|||.+.|... + ....++++ .++++|+++||+.+.||+
T Consensus 182 ~----~---------------~~~~ki~vi~ngvd~~~~~~~----~----~~~~~~~~~~~~~~~~i~~~G~l~~~K~~ 234 (405)
T TIGR03449 182 Y----D---------------ADPDRIDVVAPGADLERFRPG----D----RATERARLGLPLDTKVVAFVGRIQPLKAP 234 (405)
T ss_pred c----C---------------CChhhEEEECCCcCHHHcCCC----c----HHHHHHhcCCCCCCcEEEEecCCCcccCH
Confidence 1 1 122367789999999887521 1 11233444 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCh-hHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002984 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSG-KDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (861)
Q Consensus 350 ~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~-~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 428 (861)
..+++|++++++++|+. ++.|+++|.+.. ++ +..+++++ ++++. +..+.+.+.|.++.+++..+|
T Consensus 235 ~~li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~~~l~~----~~~~~-------~l~~~v~~~g~~~~~~~~~~l 300 (405)
T TIGR03449 235 DVLLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATPDALIE----LAAEL-------GIADRVRFLPPRPPEELVHVY 300 (405)
T ss_pred HHHHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHHHHHHH----HHHHc-------CCCceEEECCCCCHHHHHHHH
Confidence 99999999999998873 467898886542 23 33334443 33332 344567788899999999999
Q ss_pred HhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHH
Q 002984 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (861)
Q Consensus 429 ~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~a 505 (861)
+.||+|++||..||||++++|||+| +.|+|+|..+|..+.+. .|++++|.|++++|++
T Consensus 301 ~~ad~~v~ps~~E~~g~~~lEAma~-------------------G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~ 361 (405)
T TIGR03449 301 RAADVVAVPSYNESFGLVAMEAQAC-------------------GTPVVAARVGGLPVAVADGETGLLVDGHDPADWADA 361 (405)
T ss_pred HhCCEEEECCCCCCcChHHHHHHHc-------------------CCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHH
Confidence 9999999999999999999999999 45689999988887773 3799999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHH
Q 002984 506 MTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (861)
Q Consensus 506 i~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 547 (861)
|.++++. ++++..+.+..++.+..+++...++.+++-+.++
T Consensus 362 i~~~l~~-~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 362 LARLLDD-PRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999974 4455555666677777889999888888766553
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-21 Score=209.23 Aligned_cols=217 Identities=17% Similarity=0.250 Sum_probs=147.9
Q ss_pred eEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCc--eEecCcEEEEeCCcc
Q 002984 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLG--IAAEHGYFIRWNKTS 668 (861)
Q Consensus 592 klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lg--liaenG~~i~~~~~~ 668 (861)
.+|++||||||+++.+.+...++++.++++++ .++|+.|+++|||+...+..+...++ ..+ +|++||+.|..++..
T Consensus 2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~-~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~ 80 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTDGDNQALLRLNALLEDH-RGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAE 80 (249)
T ss_pred eEEEEcCCCcCcCCCCCChHHHHHHHHHHHHh-hccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCC
Confidence 48999999999974334577889999999998 79999999999999999999865433 123 789999999876521
Q ss_pred eEEecCCccChHHHH---------HHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCC-
Q 002984 669 EWETNHLGADLEWKK---------IVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANE- 738 (861)
Q Consensus 669 ~~~~~~~~~~~~w~~---------~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~- 738 (861)
..+..|.. .+..+...+....+......+...+.+..... ...+.++.+.+.+...
T Consensus 81 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~l~~~l~~~~ 146 (249)
T TIGR01485 81 -------VPDQHWAEYLSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPE-------AAPEVIKQLTEMLKETG 146 (249)
T ss_pred -------cCCHHHHHHHhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechh-------hhhHHHHHHHHHHHhcC
Confidence 11222221 12222222222223332333334444443221 1223444455444432
Q ss_pred --CEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC
Q 002984 739 --PAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG 816 (861)
Q Consensus 739 --~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG 816 (861)
...+.++..++||.|++++|+.|++++++++ |++++++++|||+.||++||+.++. .+|+|+
T Consensus 147 ~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~---~i~~~~~i~~GD~~ND~~ml~~~~~-------------~~va~~ 210 (249)
T TIGR01485 147 LDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL---AMEPSQTLVCGDSGNDIELFEIGSV-------------RGVIVS 210 (249)
T ss_pred CCEEEEEECCceEEEEeCCCChHHHHHHHHHHc---CCCccCEEEEECChhHHHHHHccCC-------------cEEEEC
Confidence 2345678899999999999999999999999 9999999999999999999998542 378888
Q ss_pred CCCcccc-----------eecC--CHhHHHHHHHHH
Q 002984 817 RKPSKAK-----------YYLD--DATDVLKLLQGL 839 (861)
Q Consensus 817 ~~~s~Ak-----------y~l~--d~~eV~~~L~~L 839 (861)
|+....+ |+.+ .++++++.|+.+
T Consensus 211 na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 211 NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHHc
Confidence 8632111 5444 358888888765
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.1e-21 Score=218.87 Aligned_cols=282 Identities=15% Similarity=0.130 Sum_probs=197.6
Q ss_pred HHHcCCCCCEEEEeCccccc-HHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHH-hhcCCEEeecChHhHHHH
Q 002984 192 MEVINPDDDCVWVHDYHLMV-LPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRG-LLNCDLIGFHTFDYARHF 269 (861)
Q Consensus 192 ~~~~~p~~D~VwvhDyhl~l-lp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~-ll~~dligF~t~~~~~~F 269 (861)
++..+| |+|++|+++-.+ ....+..+..++|+.+..|..|+..+.... +...+.+. +-.+|.+-+.+....+.+
T Consensus 84 ~~~~~~--DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~ 159 (398)
T cd03796 84 LIRERI--TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENT 159 (398)
T ss_pred HHhcCC--CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHH
Confidence 334466 999999987543 334444455568999999987753332111 11222222 346788888777655544
Q ss_pred HHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCH
Q 002984 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGI 349 (861)
Q Consensus 270 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 349 (861)
.... + ....++.++|+|+|.+.|..... . ..+++++|+++||+.+.||+
T Consensus 160 ~~~~----~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~ 208 (398)
T cd03796 160 VLRA----S---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGI 208 (398)
T ss_pred HHHh----C---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCH
Confidence 3210 1 11235678899999988753211 0 12567899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002984 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (861)
Q Consensus 350 ~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 429 (861)
..+++|+..+.+++|+++ |+.+|. ++..+++++.++ + .+..+.+.+.|.++.+++.++|+
T Consensus 209 ~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l~~~~~----~-------~~l~~~v~~~G~~~~~~~~~~l~ 268 (398)
T cd03796 209 DLLVGIIPEICKKHPNVR----FIIGGD-----GPKRILLEEMRE----K-------YNLQDRVELLGAVPHERVRDVLV 268 (398)
T ss_pred HHHHHHHHHHHhhCCCEE----EEEEeC-----CchHHHHHHHHH----H-------hCCCCeEEEeCCCCHHHHHHHHH
Confidence 999999999988888866 888873 344344443333 2 23345566778999999999999
Q ss_pred hcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-CC-ceEeCCCCHHHHHHHHH
Q 002984 430 VAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SG-AIRVNPWDIDAVADAMT 507 (861)
Q Consensus 430 ~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~-ai~vnP~d~~~~A~ai~ 507 (861)
.||++|+||..||||++.+|||+| |.|+|+|..+|..+.+ ++ +++++| |.++++++|.
T Consensus 269 ~ad~~v~pS~~E~~g~~~~EAma~-------------------G~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~ 328 (398)
T cd03796 269 QGHIFLNTSLTEAFCIAIVEAASC-------------------GLLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLE 328 (398)
T ss_pred hCCEEEeCChhhccCHHHHHHHHc-------------------CCCEEECCCCCchhheeCCceeecCC-CHHHHHHHHH
Confidence 999999999999999999999999 5568999999988877 33 344544 9999999999
Q ss_pred HHhcCCHHHHHHHHHHhhh-hhccCCHhHHHHHHHHHHHHHHH
Q 002984 508 LAINMRDSEKQLRHEKHYR-YVSTHDVAYWARSFAQDLERACR 549 (861)
Q Consensus 508 ~aL~m~~~e~~~r~~~~~~-~v~~~~~~~W~~~fl~~l~~~~~ 549 (861)
+++.++.+.+.. .++.++ ....+++..-++++++..+++..
T Consensus 329 ~~l~~~~~~~~~-~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 329 EAISILRTGKHD-PWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred HHHhChhhhhhH-HHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 999865544333 344444 44568899889988887776543
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-21 Score=208.20 Aligned_cols=225 Identities=16% Similarity=0.100 Sum_probs=149.7
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCc
Q 002984 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKT 667 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~ 667 (861)
.++|+|++|+||||++ .++.+++.++++|++| ++.|+.++++|||+...+...+..+. ..++++.||++|+.+++
T Consensus 2 ~~~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l-~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~ 77 (273)
T PRK00192 2 MMKLLVFTDLDGTLLD---HHTYSYEPAKPALKAL-KEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKN 77 (273)
T ss_pred CcceEEEEcCcccCcC---CCCcCcHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEeccc
Confidence 4689999999999999 6778889999999999 79999999999999999999887764 23689999999987543
Q ss_pred c---------------eEEecCCccChHHHHHHHHHHHHHhhcCCCce-Eeec----cc----eeEe---e-ecc--CCc
Q 002984 668 S---------------EWETNHLGADLEWKKIVEPVMRSYTEATDGSN-IEIK----ES----ALVW---H-HQD--ADP 717 (861)
Q Consensus 668 ~---------------~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~-ie~k----~~----~l~~---~-~~~--~d~ 717 (861)
. .+...++ .+.+.++++.+........ .... +. .+.. . ... ...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (273)
T PRK00192 78 YFPFQPDGERLKGDYWVIELGPP------YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSE 151 (273)
T ss_pred ccccCCccccccCCceEEEcCCC------HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCC
Confidence 1 1121111 1233333332211100000 0000 00 0000 0 000 000
Q ss_pred cchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCC-CeEEEEeCCcchHHHHHHcc
Q 002984 718 DFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPP-DFVMCVGDDRSDEDMFESIL 796 (861)
Q Consensus 718 ~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag 796 (861)
.+......+..+.+.+.+...++.+..+..++||.|++ +||.|++++++++ |+++ +++++|||+.||++||+.+|
T Consensus 152 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~---~i~~~~~v~~~GDs~NDi~m~~~ag 227 (273)
T PRK00192 152 PFLWNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELY---RRQDGVETIALGDSPNDLPMLEAAD 227 (273)
T ss_pred ceeecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHH---hccCCceEEEEcCChhhHHHHHhCC
Confidence 00000112344445544544455555667899999999 9999999999999 9999 99999999999999999999
Q ss_pred ccCCCCCCCCCCceEEEEeCCCC--------ccc-ceec----CCHhHHHHHHHHHHh
Q 002984 797 STVSGPSLPVPPEIFACTVGRKP--------SKA-KYYL----DDATDVLKLLQGLAT 841 (861)
Q Consensus 797 ~~~~~~~~~~~~~~~av~vG~~~--------s~A-ky~l----~d~~eV~~~L~~L~~ 841 (861)
. +|+|||++ ..| ++.. ++.++|++.|+.+..
T Consensus 228 ~--------------~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 228 I--------------AVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred e--------------eEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHHh
Confidence 6 78888864 223 3544 347899999998753
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.1e-21 Score=218.34 Aligned_cols=273 Identities=18% Similarity=0.120 Sum_probs=197.8
Q ss_pred CEEEEeCcccccHHHHHHhh-cCCCeEEEEEecCCCC-hHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHh
Q 002984 200 DCVWVHDYHLMVLPTFLRKR-FNRIKLGFFLHSPFPS-SEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRML 277 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~-~~~~~i~~flH~PfP~-~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~l 277 (861)
|+|+.|.-+.-.+..++++. ....++.+++|-+-.. ..+.. ..+..+-+.+-.+|.|-..+....+.+.+ +
T Consensus 120 diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~-----~ 192 (406)
T PRK15427 120 DVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK-----M 192 (406)
T ss_pred CEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH-----c
Confidence 89999987766667777653 2245677788864221 11110 11122333345688887766544433321 1
Q ss_pred CCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHH
Q 002984 278 GLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAME 357 (861)
Q Consensus 278 g~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~ 357 (861)
|. ...+|.++|+|||.+.|..... ....+...|++|||+.+.||+..+++|++
T Consensus 193 g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a~~ 245 (406)
T PRK15427 193 GC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEACR 245 (406)
T ss_pred CC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHHHH
Confidence 21 1235677899999988742110 01234567999999999999999999999
Q ss_pred HHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceec
Q 002984 358 QLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVN 437 (861)
Q Consensus 358 ~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvt 437 (861)
.+.+++|+++ |+.+| +|+..+++++.++ + .+..+.+.+.|.++++|+..+|+.||+||+|
T Consensus 246 ~l~~~~~~~~----l~ivG-----~G~~~~~l~~~~~----~-------~~l~~~V~~~G~~~~~el~~~l~~aDv~v~p 305 (406)
T PRK15427 246 QLKEQGVAFR----YRILG-----IGPWERRLRTLIE----Q-------YQLEDVVEMPGFKPSHEVKAMLDDADVFLLP 305 (406)
T ss_pred HHHhhCCCEE----EEEEE-----CchhHHHHHHHHH----H-------cCCCCeEEEeCCCCHHHHHHHHHhCCEEEEC
Confidence 9988888765 88888 3444444444433 3 2345678899999999999999999999999
Q ss_pred ccc------cCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHH
Q 002984 438 AVR------DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTL 508 (861)
Q Consensus 438 S~~------EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~ 508 (861)
|.. ||++++.+|||+| |.|+|+|..+|+.+.+. .|++|+|.|++++|++|.+
T Consensus 306 S~~~~~g~~Eg~p~~llEAma~-------------------G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~ 366 (406)
T PRK15427 306 SVTGADGDMEGIPVALMEAMAV-------------------GIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAA 366 (406)
T ss_pred CccCCCCCccCccHHHHHHHhC-------------------CCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHH
Confidence 984 9999999999999 45699999999888873 4899999999999999999
Q ss_pred HhcCCHHHHHHHHHHhhhhhc-cCCHhHHHHHHHHHHH
Q 002984 509 AINMRDSEKQLRHEKHYRYVS-THDVAYWARSFAQDLE 545 (861)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~fl~~l~ 545 (861)
++++++++++.+.++.++++. .+++...++++.+-++
T Consensus 367 l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 367 FSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 999788777777888888874 4888888888776654
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.8e-21 Score=220.03 Aligned_cols=298 Identities=18% Similarity=0.174 Sum_probs=191.3
Q ss_pred cCCCCCEEEEeCcccccHHHHHHhh-cCCCeEEEEEecC-----CCChHHHhc--CCch-------------HHHHHHhh
Q 002984 195 INPDDDCVWVHDYHLMVLPTFLRKR-FNRIKLGFFLHSP-----FPSSEIYRT--LPVR-------------DEILRGLL 253 (861)
Q Consensus 195 ~~p~~D~VwvhDyhl~llp~~lr~~-~~~~~i~~flH~P-----fP~~e~f~~--lp~r-------------~~il~~ll 253 (861)
++| |+|++||+|--++|.+|+.+ ..+.++.++.|.. ||. +.+.. +|.. .-+..++.
T Consensus 132 ~~p--DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 132 FVP--DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCC--CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 466 99999999999999999743 3467899999964 322 11111 1110 01334455
Q ss_pred cCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCc-------h----hHH
Q 002984 254 NCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLP-------A----TAT 322 (861)
Q Consensus 254 ~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~-------~----~~~ 322 (861)
.||.|---+..|++.....-. -.|++. .+..+..++.++|+|||.+.|.+..... + ...
T Consensus 209 ~ad~vitVS~~~a~ei~~~~~-g~gl~~---------~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~ 278 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPEA-GMGLDG---------LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAA 278 (485)
T ss_pred hcCeeeecChhHHHHHhcccC-CcChHH---------HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHH
Confidence 566655555555543322000 000000 0011234678899999999886432100 0 011
Q ss_pred HHHHHHHHcC-----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHH
Q 002984 323 KIKEIEKQFD-----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTA 397 (861)
Q Consensus 323 ~~~~l~~~~~-----~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~ 397 (861)
....+++++. +.+++++|+|+.+.||+..+++|+++++++ + +.|+.+|. |+ .++++++++++
T Consensus 279 ~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~-----G~--~~~~~~l~~l~ 345 (485)
T PRK14099 279 NKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGS-----GD--AELEARFRAAA 345 (485)
T ss_pred hHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEec-----CC--HHHHHHHHHHH
Confidence 1245666651 356888899999999999999999998753 3 44888874 22 23445555555
Q ss_pred HHHhhccCCCCcccEEEEcCCCCHHHHHHHH-HhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceE
Q 002984 398 KRINEVYGSPNYEPVVLIDRPVPRFEKSAYY-AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSML 476 (861)
Q Consensus 398 ~~IN~~~~~~~~~pvv~~~~~v~~~el~aly-~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~l 476 (861)
.+. + ..++.+.+. .+++..+| +.||+||+||.+|||||+.+|||+| +.++
T Consensus 346 ~~~----~----~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~-------------------G~pp 396 (485)
T PRK14099 346 QAY----P----GQIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRY-------------------GAVP 396 (485)
T ss_pred HHC----C----CCEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHC-------------------CCCc
Confidence 432 2 124456665 67888877 5799999999999999999999999 4467
Q ss_pred EeccCCCCcccC-C-----------CceEeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHhhhhhccCCHhHHHHHHHH
Q 002984 477 VVSEFIGCSPSL-S-----------GAIRVNPWDIDAVADAMTLAIN--MRDSEKQLRHEKHYRYVSTHDVAYWARSFAQ 542 (861)
Q Consensus 477 V~Se~~G~~~~l-~-----------~ai~vnP~d~~~~A~ai~~aL~--m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~ 542 (861)
|+|..+|..+.+ . .|++|+|.|++++|++|.+++. ..++.++...++.+ ...+++..-++++++
T Consensus 397 Vvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~ 474 (485)
T PRK14099 397 VVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAA 474 (485)
T ss_pred EEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHH
Confidence 889998988876 2 4899999999999999998543 13333333333332 356888888888877
Q ss_pred HHHHHHH
Q 002984 543 DLERACR 549 (861)
Q Consensus 543 ~l~~~~~ 549 (861)
-.+++.+
T Consensus 475 lY~~l~~ 481 (485)
T PRK14099 475 LYRSLVA 481 (485)
T ss_pred HHHHHHh
Confidence 6666543
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.3e-21 Score=202.84 Aligned_cols=198 Identities=16% Similarity=0.152 Sum_probs=128.5
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc--cC-CceEecCcEEEEeC
Q 002984 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC--EM-LGIAAEHGYFIRWN 665 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~--~~-lgliaenG~~i~~~ 665 (861)
.++|+|++|+||||++ +++.++++++++|+++ +++|+.|+|||||++..+.+.++.. .. ..+++.||+.|+..
T Consensus 3 ~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK---PRNPITQEMKDTLAKL-KSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKD 78 (247)
T ss_pred CCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEEC
Confidence 4589999999999999 8889999999999999 7999999999999999998888532 12 25789999999976
Q ss_pred CcceEEecCCc-cChHHHHHHHHHHHHH-----hhcCCCceEeeccceeEeeec-cCC-----ccch-----hccHHHHH
Q 002984 666 KTSEWETNHLG-ADLEWKKIVEPVMRSY-----TEATDGSNIEIKESALVWHHQ-DAD-----PDFG-----SCQAKELL 728 (861)
Q Consensus 666 ~~~~~~~~~~~-~~~~w~~~v~~i~~~y-----~~~~~gs~ie~k~~~l~~~~~-~~d-----~~~~-----~~~a~el~ 728 (861)
+...+...+.. .+.++...+....+.+ .....+.+.+.........+. ... ..+. .....++.
T Consensus 79 ~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (247)
T PTZ00174 79 GELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFI 158 (247)
T ss_pred CeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHH
Confidence 65555544321 2222222121222111 111123333322111111110 000 0000 01123455
Q ss_pred HHHHHHhcCCCEEEEE-cCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeC----CcchHHHHHHccc
Q 002984 729 DHLESVLANEPAVVKR-GQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGD----DRSDEDMFESILS 797 (861)
Q Consensus 729 ~~L~~~l~~~~~~v~~-g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~ 797 (861)
+.+.+.+.+..+.... +..++||.|+|+|||.|+++|+++ +++++|||| +.||++||+.++.
T Consensus 159 ~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~-------~~eviafGD~~~~~~NDieMl~~~~~ 225 (247)
T PTZ00174 159 QDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND-------FKEIHFFGDKTFEGGNDYEIYNDPRT 225 (247)
T ss_pred HHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh-------hhhEEEEcccCCCCCCcHhhhhcCCC
Confidence 5565555433333333 457999999999999999999986 489999999 8999999998765
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-20 Score=219.36 Aligned_cols=285 Identities=16% Similarity=0.194 Sum_probs=199.3
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchH----HHHHHh-hcCCEEeecChHh
Q 002984 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRD----EILRGL-LNCDLIGFHTFDY 265 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~----~il~~l-l~~dligF~t~~~ 265 (861)
+++..+| |+|++|+...+.++.++-.+..++|+.+.+|.-+|..-.....++.. .+.+.+ -.+|.|...+...
T Consensus 139 ~i~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~ 216 (465)
T PLN02871 139 EVARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPAL 216 (465)
T ss_pred HHHhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHH
Confidence 3444577 89999987776666655444557889888887655321111111110 111222 3578887777766
Q ss_pred HHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc----CCCeEEEeec
Q 002984 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF----DGKKLILGID 341 (861)
Q Consensus 266 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~----~~~~vil~Vd 341 (861)
.+.+... +. ....++.++|+|||.+.|.+... . ..+++++ .++++|+++|
T Consensus 217 ~~~l~~~-----~~--------------~~~~kv~vi~nGvd~~~f~p~~~---~----~~~~~~~~~~~~~~~~i~~vG 270 (465)
T PLN02871 217 GKELEAA-----GV--------------TAANRIRVWNKGVDSESFHPRFR---S----EEMRARLSGGEPEKPLIVYVG 270 (465)
T ss_pred HHHHHHc-----CC--------------CCcCeEEEeCCccCccccCCccc---c----HHHHHHhcCCCCCCeEEEEeC
Confidence 6555430 10 01235678999999988853211 1 1223333 3678999999
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCH
Q 002984 342 DMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPR 421 (861)
Q Consensus 342 rld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~ 421 (861)
|+.+.||+..+++|++++ |+++ |+++| +|+..+++++ +++. . + +.|.|.++.
T Consensus 271 rl~~~K~~~~li~a~~~~----~~~~----l~ivG-----~G~~~~~l~~----~~~~-------~---~-V~f~G~v~~ 322 (465)
T PLN02871 271 RLGAEKNLDFLKRVMERL----PGAR----LAFVG-----DGPYREELEK----MFAG-------T---P-TVFTGMLQG 322 (465)
T ss_pred CCchhhhHHHHHHHHHhC----CCcE----EEEEe-----CChHHHHHHH----Hhcc-------C---C-eEEeccCCH
Confidence 999999999999888654 6554 88887 3444344333 3321 1 2 457789999
Q ss_pred HHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC------CceEeC
Q 002984 422 FEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS------GAIRVN 495 (861)
Q Consensus 422 ~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------~ai~vn 495 (861)
+|+..+|+.||+||+||..||||++++||||| |.|+|+|..+|+.+.+. +|++++
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~-------------------G~PVI~s~~gg~~eiv~~~~~~~~G~lv~ 383 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMAS-------------------GVPVVAARAGGIPDIIPPDQEGKTGFLYT 383 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHc-------------------CCCEEEcCCCCcHhhhhcCCCCCceEEeC
Confidence 99999999999999999999999999999999 45699999999887763 379999
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHH-HHHHHHhh
Q 002984 496 PWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQD-LERACRDH 551 (861)
Q Consensus 496 P~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~-l~~~~~~~ 551 (861)
|.|++++|++|.++++ +++.++.+.++.++++.++++...++.+++. ..++...+
T Consensus 384 ~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 384 PGDVDDCVEKLETLLA-DPELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred CCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 4556666677778888889999999999874 45554443
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.5e-21 Score=200.24 Aligned_cols=214 Identities=19% Similarity=0.220 Sum_probs=145.3
Q ss_pred EEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccC-Cc--eEecCcEEEEeCCcce
Q 002984 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM-LG--IAAEHGYFIRWNKTSE 669 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~-lg--liaenG~~i~~~~~~~ 669 (861)
+|++||||||++ .++.+++.+ ++++ + +++|+.++++|||+...+.+++..+.- .. ++++||+.|......
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~- 73 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-G-SGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPEL- 73 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCC-
Confidence 589999999999 677777766 7777 5 789999999999999999999976531 23 899999988764321
Q ss_pred EEecCCccChHHHHHH-----HHHHHHHhhcCCCceEeeccc--eeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEE
Q 002984 670 WETNHLGADLEWKKIV-----EPVMRSYTEATDGSNIEIKES--ALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVV 742 (861)
Q Consensus 670 ~~~~~~~~~~~w~~~v-----~~i~~~y~~~~~gs~ie~k~~--~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v 742 (861)
..+..|.... ...+..+....+|..++.+.. ...+++...+... ....++.+.+.+. ......+
T Consensus 74 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~l~~~-~~~~~~~ 144 (236)
T TIGR02471 74 ------QPDRFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLDPEGE--PILPQIRQRLRQQ-SQAAKVI 144 (236)
T ss_pred ------CCChhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEECcccc--hHHHHHHHHHHhc-cCCEEEE
Confidence 1111222111 011223333456655554432 2344443322111 1122333444332 1111235
Q ss_pred EEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----
Q 002984 743 KRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK---- 818 (861)
Q Consensus 743 ~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---- 818 (861)
.++..++|+.|+++||+.|++++++++ |++++++++|||+.||++||+.++. +++||++
T Consensus 145 ~~~~~~~ei~~~~~~K~~al~~l~~~~---g~~~~~~i~~GD~~nD~~ml~~~~~--------------~iav~na~~~~ 207 (236)
T TIGR02471 145 LSCGWFLDVLPLRASKGLALRYLSYRW---GLPLEQILVAGDSGNDEEMLRGLTL--------------GVVVGNHDPEL 207 (236)
T ss_pred EECCceEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEEcCCccHHHHHcCCCc--------------EEEEcCCcHHH
Confidence 567788999999999999999999999 9999999999999999999999875 7788886
Q ss_pred Ccccc----eecC--CHhHHHHHHHHH
Q 002984 819 PSKAK----YYLD--DATDVLKLLQGL 839 (861)
Q Consensus 819 ~s~Ak----y~l~--d~~eV~~~L~~L 839 (861)
+..|+ |+++ +.++|.+.|+.+
T Consensus 208 k~~a~~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 208 EGLRHQQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred HHhhcCCcEEEcCCCChhHHHHHHHhh
Confidence 35566 6664 457899988764
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.4e-20 Score=206.39 Aligned_cols=207 Identities=13% Similarity=0.148 Sum_probs=157.2
Q ss_pred EEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc--CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 002984 297 VYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (861)
Q Consensus 297 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvq 374 (861)
.++.++|+|||.+.|..... . .....++.+ .++.+|+++||+++.||+..+++|+..+++++|+...++.|+.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~---~--~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i 234 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRG---D--RSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVI 234 (374)
T ss_pred hhEEEeccCccccccCCCcc---c--hhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEE
Confidence 35677899999987752211 1 111112222 4678999999999999999999999999999987766788998
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeee
Q 002984 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (861)
Q Consensus 375 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~ 454 (861)
+|. |+..+++++.+. + .+....+.+.|. .+++..+|+.||++|+||..||||++++|||+|
T Consensus 235 ~G~-----g~~~~~~~~~~~----~-------~~~~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~- 295 (374)
T TIGR03088 235 VGD-----GPARGACEQMVR----A-------AGLAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMAS- 295 (374)
T ss_pred ecC-----CchHHHHHHHHH----H-------cCCcceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHc-
Confidence 883 333334443333 2 234456777774 578999999999999999999999999999999
Q ss_pred cCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh-cc
Q 002984 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-ST 530 (861)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~ 530 (861)
+.|+|+|..+|..+.+. .|++++|.|++++|++|.++++ .++++..+.++.++++ ..
T Consensus 296 ------------------G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~-~~~~~~~~~~~a~~~~~~~ 356 (374)
T TIGR03088 296 ------------------GLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVS-DPAARRAHGAAGRARAEQQ 356 (374)
T ss_pred ------------------CCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHh
Confidence 45699999999888873 3899999999999999999987 4445556666777776 56
Q ss_pred CCHhHHHHHHHHHHHH
Q 002984 531 HDVAYWARSFAQDLER 546 (861)
Q Consensus 531 ~~~~~W~~~fl~~l~~ 546 (861)
+++...++++.+-..+
T Consensus 357 fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 357 FSINAMVAAYAGLYDQ 372 (374)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 8888888887765543
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-20 Score=196.07 Aligned_cols=196 Identities=16% Similarity=0.130 Sum_probs=124.8
Q ss_pred EEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-C-CceEecCcEEEEeCCc-ce
Q 002984 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-M-LGIAAEHGYFIRWNKT-SE 669 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~-lgliaenG~~i~~~~~-~~ 669 (861)
+|++|+||||++ +++.+++.++++|+++ +++|+.|+++|||+...+..++..+. . .++|++||+.|..... ..
T Consensus 1 ~i~~DlDGTLL~---~~~~~~~~~~~~l~~l-~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 76 (221)
T TIGR02463 1 WVFSDLDGTLLD---SHSYDWQPAAPWLTRL-QEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWRE 76 (221)
T ss_pred CEEEeCCCCCcC---CCCCCcHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc
Confidence 589999999999 6665666699999999 79999999999999999999998764 2 4699999999986432 11
Q ss_pred E---EecCCccChHHHHHHHHHHHHHhhcCCC-ceEeec--------cceeEe------eeccCCccchhccHHHHHHHH
Q 002984 670 W---ETNHLGADLEWKKIVEPVMRSYTEATDG-SNIEIK--------ESALVW------HHQDADPDFGSCQAKELLDHL 731 (861)
Q Consensus 670 ~---~~~~~~~~~~w~~~v~~i~~~y~~~~~g-s~ie~k--------~~~l~~------~~~~~d~~~~~~~a~el~~~L 731 (861)
+ ... .....| +.+..+++...+...- ...... ...+.. ........+......+..+.+
T Consensus 77 ~~~~~~~--~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (221)
T TIGR02463 77 EPGYPRI--ILGISY-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRF 153 (221)
T ss_pred CCCceEE--ecCCCH-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHH
Confidence 1 000 011111 2233333321111000 000000 000000 000000000000112333344
Q ss_pred HHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002984 732 ESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 732 ~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
.+.+......+..+..++||.|++++||.|++++++++ |++++++++|||+.||++||+.+|.+
T Consensus 154 ~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~l---gi~~~~vi~~GD~~NDi~ml~~ag~~ 217 (221)
T TIGR02463 154 TALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATY---NQPDVKTLGLGDGPNDLPLLEVADYA 217 (221)
T ss_pred HHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHh---CCCCCcEEEECCCHHHHHHHHhCCce
Confidence 44444334555556789999999999999999999999 99999999999999999999999974
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-19 Score=205.02 Aligned_cols=286 Identities=20% Similarity=0.174 Sum_probs=200.2
Q ss_pred CCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcC-----C-chH-HHHHHhhcCCEEeecChHhHHH
Q 002984 196 NPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTL-----P-VRD-EILRGLLNCDLIGFHTFDYARH 268 (861)
Q Consensus 196 ~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~l-----p-~r~-~il~~ll~~dligF~t~~~~~~ 268 (861)
+| |+|.+|++....+...+.+. .+.++.+..|...+........ + .+. .-...+..+|.+.+.+......
T Consensus 101 ~~--Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 177 (398)
T cd03800 101 RP--DLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEE 177 (398)
T ss_pred Cc--cEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHH
Confidence 55 99999988777666666544 4688999999765322111000 0 011 1123445789999888766665
Q ss_pred HHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccC
Q 002984 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKG 348 (861)
Q Consensus 269 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KG 348 (861)
+...- + ....++.++|+|+|.+.+..... ......++. ...++++|+++||+++.||
T Consensus 178 ~~~~~----~---------------~~~~~~~vi~ng~~~~~~~~~~~---~~~~~~~~~-~~~~~~~i~~~gr~~~~k~ 234 (398)
T cd03800 178 LYSLY----G---------------AYPRRIRVVPPGVDLERFTPYGR---AEARRARLL-RDPDKPRILAVGRLDPRKG 234 (398)
T ss_pred HHHHc----c---------------ccccccEEECCCCCccceecccc---hhhHHHhhc-cCCCCcEEEEEcccccccC
Confidence 54310 0 11123678999999887753211 111111111 1156789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002984 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (861)
Q Consensus 349 i~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 428 (861)
+..+++|+..+.+++|+++ |+.+|....... .....+++.++++. +..+.+.+.+.++.+++..+|
T Consensus 235 ~~~ll~a~~~l~~~~~~~~----l~i~G~~~~~~~---~~~~~~~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~ 300 (398)
T cd03800 235 IDTLIRAYAELPELRERAN----LVIVGGPRDDIL---AMDEEELRELAREL-------GVIDRVDFPGRVSREDLPALY 300 (398)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEEECCCCcch---hhhhHHHHHHHHhc-------CCCceEEEeccCCHHHHHHHH
Confidence 9999999999988887765 888886542221 22223344444432 233566788899999999999
Q ss_pred HhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHH
Q 002984 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (861)
Q Consensus 429 ~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~a 505 (861)
+.||++++||..||+|++++|||+| +.|+|+|+.+|..+.+. .|++++|.|+++++++
T Consensus 301 ~~adi~l~ps~~e~~~~~l~Ea~a~-------------------G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~ 361 (398)
T cd03800 301 RAADVFVNPALYEPFGLTALEAMAC-------------------GLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAA 361 (398)
T ss_pred HhCCEEEecccccccCcHHHHHHhc-------------------CCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHH
Confidence 9999999999999999999999999 45699999999888882 4899999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHH
Q 002984 506 MTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFA 541 (861)
Q Consensus 506 i~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl 541 (861)
|.++++. +++++.+.++.++++ ..+++..+++.++
T Consensus 362 i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 362 LRRLLTD-PALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 9999975 455555666667777 6788888888765
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.5e-20 Score=213.89 Aligned_cols=309 Identities=17% Similarity=0.201 Sum_probs=203.2
Q ss_pred HHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccccHHHHHHhhc-----CCCeEEEEEecCCCCh----HHHhcC--Cc-
Q 002984 178 QAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKRF-----NRIKLGFFLHSPFPSS----EIYRTL--PV- 244 (861)
Q Consensus 178 ~~Y~~vN~~fa~~v~~~-~~p~~D~VwvhDyhl~llp~~lr~~~-----~~~~i~~flH~PfP~~----e~f~~l--p~- 244 (861)
..|...++...+.+.+. .+| |+|++||+|-.++|.++++++ .+.|+.|..|.+.+.. ..+..+ ++
T Consensus 110 ~~~~~f~~~~~~~l~~~~~~p--DviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~ 187 (476)
T cd03791 110 ERFALFSRAALELLRRLGWKP--DIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWE 187 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--cEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCcc
Confidence 44555555555544432 355 999999999999999998874 5789999999874321 111111 11
Q ss_pred -------------hHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEE--ecCeEEEEEEecccCCch
Q 002984 245 -------------RDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD--YFGRTVYIKILPVGVHMG 309 (861)
Q Consensus 245 -------------r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--~~gr~~~i~v~p~GId~~ 309 (861)
..-+..++..||.|-..+..|++..++.- .+. +++ ...+..++.++|+|||.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-----------~~~-gl~~~~~~~~~ki~~I~NGid~~ 255 (476)
T cd03791 188 ELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-----------FGE-GLDGLLRARAGKLSGILNGIDYD 255 (476)
T ss_pred chhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-----------CCc-chHHHHHhccCCeEEEeCCCcCc
Confidence 01233345566766666666655443210 000 000 012235788899999998
Q ss_pred HHHHhhCCc-----------hhHHHHHHHHHHc-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEE
Q 002984 310 RLESVLNLP-----------ATATKIKEIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLV 373 (861)
Q Consensus 310 ~~~~~~~~~-----------~~~~~~~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLv 373 (861)
.|.+..... ........+++++ .++++|+++||+.+.||+..+++|++++.++. +.|+
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lv 329 (476)
T cd03791 256 VWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLV 329 (476)
T ss_pred ccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEE
Confidence 886432110 0112234466665 46789999999999999999999999987653 4488
Q ss_pred EEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeee
Q 002984 374 QIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVC 453 (861)
Q Consensus 374 qi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac 453 (861)
.+|.. + .++++++.+++.+. ...++++.+ .+.++...+|+.||++++||..||+|++.+|||+|
T Consensus 330 i~G~g-----~--~~~~~~~~~~~~~~--------~~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~ 393 (476)
T cd03791 330 ILGSG-----D--PEYEEALRELAARY--------PGRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY 393 (476)
T ss_pred EEecC-----C--HHHHHHHHHHHHhC--------CCcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhC
Confidence 77742 1 23444555554432 113445554 45777789999999999999999999999999999
Q ss_pred ecCCCcccccccCCCCCCCCceEEeccCCCCcccC-C--------CceEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHH
Q 002984 454 RQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--------GAIRVNPWDIDAVADAMTLAINMR--DSEKQLRHE 522 (861)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~ai~vnP~d~~~~A~ai~~aL~m~--~~e~~~r~~ 522 (861)
+.|+|+|..+|..+.+ + .|+++.|.|+++++++|.++++.. ++++....+
T Consensus 394 -------------------G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~ 454 (476)
T cd03791 394 -------------------GTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQR 454 (476)
T ss_pred -------------------CCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 5568999999999888 2 589999999999999999998643 233333333
Q ss_pred HhhhhhccCCHhHHHHHHHHH
Q 002984 523 KHYRYVSTHDVAYWARSFAQD 543 (861)
Q Consensus 523 ~~~~~v~~~~~~~W~~~fl~~ 543 (861)
+... ..+++..-++++++-
T Consensus 455 ~~~~--~~fsw~~~a~~~~~~ 473 (476)
T cd03791 455 NAMA--QDFSWDRSAKEYLEL 473 (476)
T ss_pred HHhc--cCCChHHHHHHHHHH
Confidence 3322 346777777666553
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-19 Score=201.20 Aligned_cols=281 Identities=17% Similarity=0.200 Sum_probs=196.2
Q ss_pred HHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHh-hcCCEEeecChHhHHH
Q 002984 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGL-LNCDLIGFHTFDYARH 268 (861)
Q Consensus 190 ~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~l-l~~dligF~t~~~~~~ 268 (861)
++++..+| |+|++|.+|..++..+++...+..++....|...+..-+ +..+.+.. .-++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 44566677 899999999888888877766677888888854332111 11111111 1134444444444444
Q ss_pred HHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCccc
Q 002984 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDI 345 (861)
Q Consensus 269 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~ 345 (861)
|+... + -...++.++|+|+|...|... ......+++++ .++++++++||+.+
T Consensus 145 ~~~~~----~---------------~~~~~~~~i~ng~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIASK----A---------------FNANKSFVVYNGIDTDRFRKD------PARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhcc----C---------------CCcccEEEEccccchhhcCcc------hHHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 44310 0 012356788999998876421 11223455554 46789999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002984 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (861)
Q Consensus 346 ~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~ 425 (861)
.||+..+++|+.++.+++|+++ |+++|. ++...++++.+. +. +..+.+.+.+. .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~~~~~~~----~~-------~~~~~v~~~g~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRATLERLIK----AL-------GLSNRVKLLGL--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHHHHHHHH----hc-------CCCCcEEEecc--cccHH
Confidence 9999999999999999888766 888873 333334443333 22 23344556665 46899
Q ss_pred HHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-CCceEeCCCCHHHHHH
Q 002984 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVAD 504 (861)
Q Consensus 426 aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ 504 (861)
.+|+.||++++||..||||++++|||+| +.|+|+|+.+|..+.+ +.++.++|.|++++++
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~-------------------G~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~ 318 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMAC-------------------ELPVVATDAGGVREVVGDSGLIVPISDPEALAN 318 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHc-------------------CCCEEEecCCChhhEecCCceEeCCCCHHHHHH
Confidence 9999999999999999999999999999 4568999998888777 4589999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHH
Q 002984 505 AMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDL 544 (861)
Q Consensus 505 ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l 544 (861)
+|.++++.++..+..+.++.......+++..+++.+++-+
T Consensus 319 ~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 319 KIDEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 9999998777777666666333446689999888887643
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.2e-19 Score=203.16 Aligned_cols=285 Identities=13% Similarity=0.127 Sum_probs=197.9
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHH-----hcCCchHH-HHHHhhcCCEEeecChHhHHHHHHH
Q 002984 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY-----RTLPVRDE-ILRGLLNCDLIGFHTFDYARHFLSC 272 (861)
Q Consensus 199 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f-----~~lp~r~~-il~~ll~~dligF~t~~~~~~Fl~~ 272 (861)
-|+|++|++...+.+.++ .+..+.++.+.+|..+|..... ..+..... ....+..+|.|-..+....+.+...
T Consensus 84 ~divh~~~~~~~~~~~~~-~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLA-KKLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHH-HHhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 499999998776555544 4556788999999876532110 00001111 1233456788877777666655431
Q ss_pred HHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccccCH
Q 002984 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGI 349 (861)
Q Consensus 273 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi 349 (861)
. -++ ...++.++|+|+|...+... . ...+++++ .++++|+++||+.+.||+
T Consensus 163 ~---~~~---------------~~~~i~vi~ng~~~~~~~~~-----~---~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 Y---PDL---------------DPEKVHVIYNGIDTKEYKPD-----D---GNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred c---CCC---------------CcceEEEecCCCChhhcCCC-----c---hHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0 011 12357789999998877421 1 12233443 467799999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002984 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (861)
Q Consensus 350 ~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 429 (861)
..+++|++++. ++++ |+.+|.. ++..++.+++.+.+...+.. ...++++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~~~----l~i~g~g-----~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KDVQ----VVLCAGA-----PDTPEVAEEVRQAVALLDRN-----RTGIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hcCc----EEEEeCC-----CCcHHHHHHHHHHHHHhccc-----cCceEEecCCCCHHHHHHHHH
Confidence 99999999873 3433 6666532 22234445555554443221 124677888999999999999
Q ss_pred hcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCH------H
Q 002984 430 VAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDI------D 500 (861)
Q Consensus 430 ~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~------~ 500 (861)
.||++|+||..||||++++|||+| +.|+|+|..+|..+.+. .|++++|.|. +
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~-------------------G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~ 340 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMAC-------------------GTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQA 340 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHc-------------------CCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHH
Confidence 999999999999999999999999 55699999998888773 4899999999 9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHHHHHHHH
Q 002984 501 AVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLERA 547 (861)
Q Consensus 501 ~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 547 (861)
+++++|.++++ ++++++.+.++.++++ ..+++..+++++++.++++
T Consensus 341 ~l~~~i~~l~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 341 ELAKAINILLA-DPELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 99999999987 4555555566666665 5689999999988776653
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=207.51 Aligned_cols=273 Identities=16% Similarity=0.129 Sum_probs=181.5
Q ss_pred cCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCch-------------H--HHH----------
Q 002984 195 INPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVR-------------D--EIL---------- 249 (861)
Q Consensus 195 ~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r-------------~--~il---------- 249 (861)
.+| |+ ||.+ +-+..+-.+.+.++++|+++++|-|.-+++.+..+-.+ . .++
T Consensus 106 ~~p--Dv-~i~~-~g~~~~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~ 181 (419)
T cd03806 106 LVP--DI-FIDT-MGYPFTYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAF 181 (419)
T ss_pred cCC--CE-EEEc-CCcccHHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHH
Confidence 367 74 4543 33333344556677899999999443344544222111 1 111
Q ss_pred ---HHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHH
Q 002984 250 ---RGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKE 326 (861)
Q Consensus 250 ---~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~ 326 (861)
-.+-.||.|-..+....+++.+ .. +...++.++++|+|.+.|.... .
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~----~~----------------~~~~~~~vi~~gvd~~~~~~~~---~------- 231 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRS----LW----------------KRNTKPSIVYPPCDVEELLKLP---L------- 231 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHH----Hh----------------CcCCCcEEEcCCCCHHHhcccc---c-------
Confidence 1223567777666544444432 10 1112567789999988775221 0
Q ss_pred HHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCC-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccC
Q 002984 327 IEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYG 405 (861)
Q Consensus 327 l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~-~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~ 405 (861)
....++++|++++|+.+.||+...|+||.++.+.+|+.. .++.|+++|..... +..++.+++++++++.
T Consensus 232 --~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~---~~~~~~~~L~~~~~~l----- 301 (419)
T cd03806 232 --DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE---DDEKRVEDLKLLAKEL----- 301 (419)
T ss_pred --ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc---ccHHHHHHHHHHHHHh-----
Confidence 012456799999999999999999999999999887631 24668888853211 1123445555555543
Q ss_pred CCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCc
Q 002984 406 SPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (861)
Q Consensus 406 ~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (861)
+....+.|.+.++.+++..+|+.||++|.||..||||++++||||| +.|+|+|..+|..
T Consensus 302 --~l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~-------------------G~pvIa~~~ggp~ 360 (419)
T cd03806 302 --GLEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAA-------------------GLIPLAHASGGPL 360 (419)
T ss_pred --CCCCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHc-------------------CCcEEEEcCCCCc
Confidence 3345677888999999999999999999999999999999999999 4568888887865
Q ss_pred ccC-C------CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHh
Q 002984 486 PSL-S------GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVA 534 (861)
Q Consensus 486 ~~l-~------~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~ 534 (861)
+++ . .|++++ |++++|++|.+++++++++++.+.+..++....++..
T Consensus 361 ~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 361 LDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred hheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHH
Confidence 433 3 378863 9999999999999998877765544444444445443
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.8e-19 Score=212.69 Aligned_cols=331 Identities=13% Similarity=0.130 Sum_probs=199.2
Q ss_pred hHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccc-cHHHHHHhhcCCCeEEEEEecC-----------CCChH-HHh
Q 002984 174 RVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLM-VLPTFLRKRFNRIKLGFFLHSP-----------FPSSE-IYR 240 (861)
Q Consensus 174 ~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~-llp~~lr~~~~~~~i~~flH~P-----------fP~~e-~f~ 240 (861)
.+.|..-.+++...++.+.......-|+|+-| |-+- ++...|++++ +++..+..|.- |...| -|+
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaH-Ywdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~ 461 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKPDLIIGN-YSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYH 461 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEC-CccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhh
Confidence 45788777777777777755443112899999 4444 5555555554 68899988932 21111 111
Q ss_pred cC-CchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCC---------eeeEEecCeEEEEEEecccCCchH
Q 002984 241 TL-PVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRG---------HIGLDYFGRTVYIKILPVGVHMGR 310 (861)
Q Consensus 241 ~l-p~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~---------~~~~~~~gr~~~i~v~p~GId~~~ 310 (861)
.. -...|.+ .|-.||.|--.|..-....-. ++ + .|.+-.+ ..+++++. -++.++|+|+|...
T Consensus 462 ~~~r~~aE~~-a~~~Ad~IIasT~qEi~g~~~---~i-~-qy~sh~~f~~p~L~rvv~GId~~~--~ki~VVppGvD~~~ 533 (815)
T PLN00142 462 FSCQFTADLI-AMNHADFIITSTYQEIAGSKD---TV-G-QYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMSI 533 (815)
T ss_pred hhhchHHHHH-HHHhhhHHHhCcHHHHhcccc---hh-h-hhhcccccccchhhhhhccccccc--cCeeEECCCCChhh
Confidence 10 0111222 444556554333221110000 00 0 0111000 00111111 26788999999998
Q ss_pred HHHhhCCc--------hhHHHH---HHHHHHc-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 002984 311 LESVLNLP--------ATATKI---KEIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (861)
Q Consensus 311 ~~~~~~~~--------~~~~~~---~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvq 374 (861)
|.+..... ...... ...++.+ .++++|++|+|+++.||+..+++||.++.+..+++ .|++
T Consensus 534 F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~----~LVI 609 (815)
T PLN00142 534 YFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELV----NLVV 609 (815)
T ss_pred cCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCc----EEEE
Confidence 86321100 000000 0011111 35779999999999999999999999886666554 4888
Q ss_pred EecCCC-CChhHHH--HHHHHHHHHHHHHhhccCCCCcccEEEEcC----CCCHHHHHHHHH-hcccceecccccCCCCc
Q 002984 375 IVNPAR-GSGKDVQ--EAKKETYLTAKRINEVYGSPNYEPVVLIDR----PVPRFEKSAYYA-VAECCIVNAVRDGMNLV 446 (861)
Q Consensus 375 i~~p~r-~~~~~~~--~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~----~v~~~el~aly~-~ADv~vvtS~~EG~nLv 446 (861)
+|.+.. ....+.+ +..+++.+++++.+ ....+.+.+ ..+..+++.+|+ ++|+||+||.+||||++
T Consensus 610 VGgg~d~~~s~d~ee~~el~~L~~La~~lg-------L~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLv 682 (815)
T PLN00142 610 VGGFIDPSKSKDREEIAEIKKMHSLIEKYN-------LKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLT 682 (815)
T ss_pred EECCccccccccHHHHHHHHHHHHHHHHcC-------CCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHH
Confidence 886411 1111111 12234445555432 122233433 455678888777 57999999999999999
Q ss_pred ceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHhc---CCHHHHHHH
Q 002984 447 PYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAIN---MRDSEKQLR 520 (861)
Q Consensus 447 ~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~---m~~~e~~~r 520 (861)
++||||| |.|+|+|..+|+.+.+. .|++|+|.|++++|++|.+++. .+++.++..
T Consensus 683 vLEAMA~-------------------GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~m 743 (815)
T PLN00142 683 VVEAMTC-------------------GLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKI 743 (815)
T ss_pred HHHHHHc-------------------CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 9999999 56699999999998883 4899999999999999988763 356666666
Q ss_pred HHHhhhhh-ccCCHhHHHHHHHHHH
Q 002984 521 HEKHYRYV-STHDVAYWARSFAQDL 544 (861)
Q Consensus 521 ~~~~~~~v-~~~~~~~W~~~fl~~l 544 (861)
.++.++.+ +.+++...++++++-.
T Consensus 744 g~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 744 SDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 66767776 5688888888877644
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.4e-19 Score=209.13 Aligned_cols=334 Identities=12% Similarity=0.129 Sum_probs=202.6
Q ss_pred hHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCC----CChHHH-hcCCchHH-
Q 002984 174 RVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPF----PSSEIY-RTLPVRDE- 247 (861)
Q Consensus 174 ~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~e~f-~~lp~r~~- 247 (861)
.+.|..-.+++...++.+.......-|+|+.|...=-++...|.++. .++..+..|..= +.+..+ ..+..+..
T Consensus 361 ~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~ 439 (784)
T TIGR02470 361 FEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHF 439 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHh
Confidence 35677777777777776655443112899998544445666665554 588777778541 111110 00110100
Q ss_pred ------HHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccC-----CCeeeEEecC---eEEEEEEecccCCchHHHH
Q 002984 248 ------ILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESK-----RGHIGLDYFG---RTVYIKILPVGVHMGRLES 313 (861)
Q Consensus 248 ------il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~-----~~~~~~~~~g---r~~~i~v~p~GId~~~~~~ 313 (861)
=+..|-.||.|--.|+.-...-...+. .|.+. .+...+ .+| ..-++.++|+|+|+..|.+
T Consensus 440 ~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~-----qY~s~~~ft~p~Ly~v-vnGid~~~~Ki~VVpPGVD~~iF~P 513 (784)
T TIGR02470 440 SCQFTADLIAMNAADFIITSTYQEIAGTKDSVG-----QYESHQAFTMPGLYRV-VHGIDVFDPKFNIVSPGADESIYFP 513 (784)
T ss_pred hhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhh-----hhhhcccccccceeee-ecCccCCcCCeEEECCCcChhhcCC
Confidence 125566788887666432111000000 00000 011111 111 1237788999999998864
Q ss_pred hhCCchhHH-HH----------HHHHHHc-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 002984 314 VLNLPATAT-KI----------KEIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVN 377 (861)
Q Consensus 314 ~~~~~~~~~-~~----------~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~ 377 (861)
......... .. ...++.+ .++++|++|+|+++.||+..+++||.++.+..+ .+.||+||.
T Consensus 514 ~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGG 589 (784)
T TIGR02470 514 YSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAG 589 (784)
T ss_pred CCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeC
Confidence 321110000 00 0112222 468899999999999999999999987644333 355888886
Q ss_pred CCCC---ChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCC-CCHHHHHHHHH----hcccceecccccCCCCccee
Q 002984 378 PARG---SGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRP-VPRFEKSAYYA----VAECCIVNAVRDGMNLVPYK 449 (861)
Q Consensus 378 p~r~---~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~-v~~~el~aly~----~ADv~vvtS~~EG~nLv~~E 449 (861)
+... ...+..+..+++.+++++. | ....+.+.+. .+..++..+|+ .+||||+||.+||||||++|
T Consensus 590 g~~~~~s~d~ee~~~i~~L~~la~~~----g---L~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLE 662 (784)
T TIGR02470 590 KLDAKESKDREEQAEIEKMHNLIDQY----Q---LHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLE 662 (784)
T ss_pred CcccccccchhHHHHHHHHHHHHHHh----C---CCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHH
Confidence 5321 1112222334555555543 2 2234455554 35566666665 24799999999999999999
Q ss_pred eeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHhc---CCHHHHHHHHHH
Q 002984 450 YIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAIN---MRDSEKQLRHEK 523 (861)
Q Consensus 450 a~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~---m~~~e~~~r~~~ 523 (861)
|||| |.|+|+|..+|+.+.+. .|++|+|.|++++|++|.++++ ..++.++...++
T Consensus 663 AMAc-------------------GlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~ 723 (784)
T TIGR02470 663 AMTC-------------------GLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQG 723 (784)
T ss_pred HHHc-------------------CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 9999 56699999999999883 4899999999999999999874 245555666666
Q ss_pred hhhhh-ccCCHhHHHHHHHHHH
Q 002984 524 HYRYV-STHDVAYWARSFAQDL 544 (861)
Q Consensus 524 ~~~~v-~~~~~~~W~~~fl~~l 544 (861)
.++++ +.+++...+++++.-+
T Consensus 724 a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 724 GLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHHHHhCCHHHHHHHHHHHH
Confidence 66666 5688888888877554
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-19 Score=200.17 Aligned_cols=274 Identities=17% Similarity=0.105 Sum_probs=191.4
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCC----CChHHHhcCCchHHHHH-HhhcCCEEeecChHh
Q 002984 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPF----PSSEIYRTLPVRDEILR-GLLNCDLIGFHTFDY 265 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~e~f~~lp~r~~il~-~ll~~dligF~t~~~ 265 (861)
+++..+| |+|++|+.+..+....+.+ ..++++.+.+|.-. +.............+.+ .+-.+|.|-+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 5566677 8999997764443333333 34678888888422 22111111111122222 234578888877655
Q ss_pred HHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCccc
Q 002984 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDI 345 (861)
Q Consensus 266 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~ 345 (861)
.+.+... |+ ...++.++|+|+|.+.+.... ...++++++++||+.+
T Consensus 154 ~~~~~~~-----~~---------------~~~~i~vi~~g~d~~~~~~~~--------------~~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLAL-----GF---------------PPEKVHVHPIGVDTAKFTPAT--------------PARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHHc-----CC---------------CHHHeEEecCCCCHHhcCCCC--------------CCCCCcEEEEEEeecc
Confidence 5544431 11 123566789999988764210 0134678999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002984 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (861)
Q Consensus 346 ~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~ 425 (861)
.||+..+++|+..+.+++|+++ |+++|. ++..++ +.+++++ .+..+.+.+.+.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~----~~~~~~~-------~~~~~~v~~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPLLAA----LEALARA-------LGLGGRVTFLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chHHHH----HHHHHHH-------cCCCCeEEECCCCCHHHHH
Confidence 9999999999999998888765 888873 333333 3333333 2334566788899999999
Q ss_pred HHHHhcccceeccc------ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC---CCceEeCC
Q 002984 426 AYYAVAECCIVNAV------RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL---SGAIRVNP 496 (861)
Q Consensus 426 aly~~ADv~vvtS~------~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~ai~vnP 496 (861)
.+|+.||++|+||. .||||++++|||+| |.|+|+|+.+|..+.+ ..|++++|
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~-------------------G~PvI~s~~~~~~e~i~~~~~g~~~~~ 320 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQAS-------------------GVPVVATRHGGIPEAVEDGETGLLVPE 320 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHc-------------------CCCEEEeCCCCchhheecCCeeEEECC
Confidence 99999999999997 59999999999999 5569999999988877 34899999
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHH
Q 002984 497 WDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFA 541 (861)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl 541 (861)
.|+++++++|.++++ +++.+.....+.++++ ..+++..+++.+.
T Consensus 321 ~d~~~l~~~i~~l~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 321 GDVAALAAALGRLLA-DPDLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred CCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 999999999999987 3445555566677776 4588888887764
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-19 Score=204.71 Aligned_cols=225 Identities=17% Similarity=0.236 Sum_probs=149.0
Q ss_pred hccceEEEecCCccccCCCCCCCCCCHHHHHHH-HHhhcCCCCeEEEECCCChhhHHHHhcccc-CCc--eEecCcEEEE
Q 002984 588 KTERRAIFLDYDGTVVPETSIIKSPGPEVISVL-KTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLG--IAAEHGYFIR 663 (861)
Q Consensus 588 ~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L-~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lg--liaenG~~i~ 663 (861)
.+.+.+|++||||||++.. .++.++.....++ +++ .++|+.++++|||++..+.++.+.++ ..+ +|+.||+.|.
T Consensus 6 ~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~-~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~ 83 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAE-YRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIA 83 (413)
T ss_pred CCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHh-hcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEE
Confidence 4456799999999999821 1446776666666 877 79999999999999888888766543 122 6788999998
Q ss_pred eCCcceEEecCCccChHHHHHHHH------HHHHHhhcCCC----ceEeeccceeEeeeccCCccchhccHHHHHHHHHH
Q 002984 664 WNKTSEWETNHLGADLEWKKIVEP------VMRSYTEATDG----SNIEIKESALVWHHQDADPDFGSCQAKELLDHLES 733 (861)
Q Consensus 664 ~~~~~~~~~~~~~~~~~w~~~v~~------i~~~y~~~~~g----s~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~ 733 (861)
..+... .+..|...... +.+. ....+. ...+.+...+.+...+. ...++.+.+.+
T Consensus 84 ~~~~~~-------~d~~w~~~l~~~w~~~~v~~~-~~~~~~l~~q~~~~~~~~Ki~~~~~~~-------~~~~~~~~l~~ 148 (413)
T PLN02382 84 YGESMV-------PDHGWVEYLNKKWDREIVVEE-TSKFPELKLQPETEQRPHKVSFYVDKK-------KAQEVIKELSE 148 (413)
T ss_pred eCCCCc-------cChhHHHHHhccCChhhHHHH-HhcCCCcccCCcccCCCeEEEEEechH-------HhHHHHHHHHH
Confidence 754211 12334333221 1111 112221 11222223333333211 12334455555
Q ss_pred HhcCC---CEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCce
Q 002984 734 VLANE---PAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEI 810 (861)
Q Consensus 734 ~l~~~---~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~ 810 (861)
.+... ...+.++..++||.|+++|||.|+++|++++...|++++++++|||+.||++||+.++.
T Consensus 149 ~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~------------- 215 (413)
T PLN02382 149 RLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDV------------- 215 (413)
T ss_pred HHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCC-------------
Confidence 55332 23456788999999999999999999999985557899999999999999999999983
Q ss_pred EEEEeCCCCc------------ccceec---CCHhHHHHHHHHHHhh
Q 002984 811 FACTVGRKPS------------KAKYYL---DDATDVLKLLQGLATA 842 (861)
Q Consensus 811 ~av~vG~~~s------------~Aky~l---~d~~eV~~~L~~L~~~ 842 (861)
++|+|||+.. .|++++ .+.+++.+.|+.+.-.
T Consensus 216 ~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~l~ 262 (413)
T PLN02382 216 YGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFNLG 262 (413)
T ss_pred CEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhCCC
Confidence 2788898741 224443 2478899999988743
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-19 Score=209.58 Aligned_cols=300 Identities=14% Similarity=0.128 Sum_probs=199.7
Q ss_pred ccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCCh---HHHhc---CCc
Q 002984 171 RFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS---EIYRT---LPV 244 (861)
Q Consensus 171 ~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~f~~---lp~ 244 (861)
.|.+-.|....-..-.|. .+...+ |+-|+|++|......++..+..+..+.|+.+..|--+|.. +++.. .+.
T Consensus 148 ~~~~~~~~~~~~~~~l~~-~l~~~~-~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~ 225 (475)
T cd03813 148 SFVDYFWTVRNMLSPLLA-AIARPL-PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSY 225 (475)
T ss_pred CHHHHHHHHHHHHHHHHH-HhccCC-CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHH
Confidence 344445543332333332 233333 3459999998777767777666666899999999655421 22211 000
Q ss_pred -hH-------HHHH-HhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhh
Q 002984 245 -RD-------EILR-GLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVL 315 (861)
Q Consensus 245 -r~-------~il~-~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~ 315 (861)
+. .+.+ .+-.||.|-..+.... ..+. .++....++.++|+|||.+.|....
T Consensus 226 ~~~~~~~~~~~l~~~~~~~ad~Ii~~s~~~~-~~~~-------------------~~g~~~~ki~vIpNgid~~~f~~~~ 285 (475)
T cd03813 226 FRRLWIRFFESLGRLAYQAADRITTLYEGNR-ERQI-------------------EDGADPEKIRVIPNGIDPERFAPAR 285 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEEEecCHHHH-HHHH-------------------HcCCCHHHeEEeCCCcCHHHcCCcc
Confidence 00 0111 1124555544433222 1111 1112233677899999998885321
Q ss_pred CCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHH
Q 002984 316 NLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYL 395 (861)
Q Consensus 316 ~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~ 395 (861)
. . ....++++|+++||+.+.||+..+++|+..+.++.|+++ |+.+|... +..++.+++++
T Consensus 286 ~-----~------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g~-----~~~~~~~e~~~ 345 (475)
T cd03813 286 R-----A------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPTD-----EDPEYAEECRE 345 (475)
T ss_pred c-----c------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEECCCC-----cChHHHHHHHH
Confidence 1 0 112567899999999999999999999999999888866 88787432 22345566666
Q ss_pred HHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCce
Q 002984 396 TAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSM 475 (861)
Q Consensus 396 l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~ 475 (861)
++++.+ ..+.+.|.| ..++..+|+.||++|+||..|||+++++||||| +.|
T Consensus 346 li~~l~-------l~~~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~-------------------G~P 396 (475)
T cd03813 346 LVESLG-------LEDNVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAA-------------------GIP 396 (475)
T ss_pred HHHHhC-------CCCeEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHc-------------------CCC
Confidence 666543 234566666 678999999999999999999999999999999 456
Q ss_pred EEeccCCCCcccCC---------CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhcc-CCHhHHHHHHHH
Q 002984 476 LVVSEFIGCSPSLS---------GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQ 542 (861)
Q Consensus 476 lV~Se~~G~~~~l~---------~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~fl~ 542 (861)
+|+|..+|+.+.+. .|++++|.|++++|++|.++++ +++.+....++.++++.+ ++....++++.+
T Consensus 397 VVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~-~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 397 VVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLK-DPELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred EEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 89999999888773 4799999999999999999998 455566666677777766 466666666554
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.2e-19 Score=188.24 Aligned_cols=211 Identities=20% Similarity=0.189 Sum_probs=137.4
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc-c-C-CceEecCcEEEEeCC
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC-E-M-LGIAAEHGYFIRWNK 666 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~-~-~-lgliaenG~~i~~~~ 666 (861)
+++++++|+||||++ .++.+++++.++|++| ++. +.|+++|||+...+.+.+... . . ..++++||+.+...+
T Consensus 6 ~~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l-~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g 80 (245)
T PLN02423 6 PGVIALFDVDGTLTA---PRKEATPEMLEFMKEL-RKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDG 80 (245)
T ss_pred cceEEEEeccCCCcC---CCCcCCHHHHHHHHHH-HhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCC
Confidence 345667999999999 7888999999999999 555 999999999999998888653 1 1 368899999999766
Q ss_pred cceEEecCCc-cChHHHHHHHHHHHHHhh--------cCCCceEeeccceeEee--eccCCc-------cc--hhccHHH
Q 002984 667 TSEWETNHLG-ADLEWKKIVEPVMRSYTE--------ATDGSNIEIKESALVWH--HQDADP-------DF--GSCQAKE 726 (861)
Q Consensus 667 ~~~~~~~~~~-~~~~w~~~v~~i~~~y~~--------~~~gs~ie~k~~~l~~~--~~~~d~-------~~--~~~~a~e 726 (861)
..++....+. .+. +.+..+++.... ...+.+++..+...... +.+... .+ ......+
T Consensus 81 ~~i~~~~l~~~l~~---~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 157 (245)
T PLN02423 81 KLIGTQSLKSFLGE---DKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPK 157 (245)
T ss_pred EEEEEecccccCCH---HHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHH
Confidence 5555433221 111 122222221111 11244554333222111 111100 00 0111234
Q ss_pred HHHHHHHHhcCCC-EEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeC----CcchHHHHHHccccCCC
Q 002984 727 LLDHLESVLANEP-AVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGD----DRSDEDMFESILSTVSG 801 (861)
Q Consensus 727 l~~~L~~~l~~~~-~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~~~ 801 (861)
+.+.+.+.+.+.. ..+.+|..++||+|+|+|||.|++.|+ ++++++|||| +.||++|++.-|.
T Consensus 158 ~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--------~~~e~~aFGD~~~~~~ND~eMl~~~~~---- 225 (245)
T PLN02423 158 MVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE--------DFDEIHFFGDKTYEGGNDHEIFESERT---- 225 (245)
T ss_pred HHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc--------CcCeEEEEeccCCCCCCcHHHHhCCCc----
Confidence 4455555554422 334455689999999999999999997 5899999999 8999999998664
Q ss_pred CCCCCCCceEEEEeCCCCcccceecCCHhHHHHHHHHHH
Q 002984 802 PSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGLA 840 (861)
Q Consensus 802 ~~~~~~~~~~av~vG~~~s~Aky~l~d~~eV~~~L~~L~ 840 (861)
.+.+ +.++++..++|+++.
T Consensus 226 ---------~~~~-----------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 226 ---------IGHT-----------VTSPDDTREQCTALF 244 (245)
T ss_pred ---------ceEE-----------eCCHHHHHHHHHHhc
Confidence 2444 457888888888763
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.2e-19 Score=197.91 Aligned_cols=266 Identities=12% Similarity=0.051 Sum_probs=181.1
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHH-HHhhcCCEEeecChHhHHHH
Q 002984 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEIL-RGLLNCDLIGFHTFDYARHF 269 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il-~~ll~~dligF~t~~~~~~F 269 (861)
+++..+| |+|++|..+...++.++.++.....+.+..|..+...+.+........+. ..+..+|.+-..+....+.+
T Consensus 75 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~ 152 (358)
T cd03812 75 LIKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWL 152 (358)
T ss_pred HHhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHH
Confidence 4445566 89999999877777777666655566778887765544332221110111 11234566655555444333
Q ss_pred HHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc--CCCeEEEeecCccccc
Q 002984 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMDIFK 347 (861)
Q Consensus 270 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~Vdrld~~K 347 (861)
... ....++.++|+|+|...+... +.... ..++.. .++.+|+++||+++.|
T Consensus 153 ~~~---------------------~~~~~~~vi~ngvd~~~~~~~---~~~~~---~~~~~~~~~~~~~i~~vGr~~~~K 205 (358)
T cd03812 153 FGK---------------------VKNKKFKVIPNGIDLEKFIFN---EEIRK---KRRELGILEDKFVIGHVGRFSEQK 205 (358)
T ss_pred HhC---------------------CCcccEEEEeccCcHHHcCCC---chhhh---HHHHcCCCCCCEEEEEEecccccc
Confidence 220 112356789999999877422 11111 111211 5688999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHH
Q 002984 348 GISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAY 427 (861)
Q Consensus 348 Gi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~al 427 (861)
|+..+++|+..+.+++|+++ |+.+|. ++..+.+++.+. + .+..+.+.+.+. .+++..+
T Consensus 206 g~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~~~~~~~----~-------~~~~~~v~~~g~--~~~~~~~ 263 (358)
T cd03812 206 NHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEEIKKKVK----E-------LGLEDKVIFLGV--RNDVPEL 263 (358)
T ss_pred ChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHHHHHHH----h-------cCCCCcEEEecc--cCCHHHH
Confidence 99999999999999998866 888873 344344444333 2 233345566665 6789999
Q ss_pred HHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC--CceEeCCCCHHHHHHH
Q 002984 428 YAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS--GAIRVNPWDIDAVADA 505 (861)
Q Consensus 428 y~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~vnP~d~~~~A~a 505 (861)
|+.||++|+||..||||++++|||+| |.|+|+|+.+|..+.+. ++++..+.+++++|++
T Consensus 264 ~~~adi~v~ps~~E~~~~~~lEAma~-------------------G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~ 324 (358)
T cd03812 264 LQAMDVFLFPSLYEGLPLVLIEAQAS-------------------GLPCILSDTITKEVDLTDLVKFLSLDESPEIWAEE 324 (358)
T ss_pred HHhcCEEEecccccCCCHHHHHHHHh-------------------CCCEEEEcCCchhhhhccCccEEeCCCCHHHHHHH
Confidence 99999999999999999999999999 56699999999888884 3555666678999999
Q ss_pred HHHHhcCCHHHHHHHHHHhhh
Q 002984 506 MTLAINMRDSEKQLRHEKHYR 526 (861)
Q Consensus 506 i~~aL~m~~~e~~~r~~~~~~ 526 (861)
|.++++.++..+..+..+..+
T Consensus 325 i~~l~~~~~~~~~~~~~~~~~ 345 (358)
T cd03812 325 ILKLKSEDRRERSSESIKKKG 345 (358)
T ss_pred HHHHHhCcchhhhhhhhhhcc
Confidence 999999887666554444333
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-18 Score=200.85 Aligned_cols=314 Identities=13% Similarity=0.139 Sum_probs=206.7
Q ss_pred ccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccc-ccHHHHHHhhcCCCeEEE
Q 002984 149 FCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHL-MVLPTFLRKRFNRIKLGF 227 (861)
Q Consensus 149 f~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl-~llp~~lr~~~~~~~i~~ 227 (861)
+-..-.||-||.+. ..-...|-++..+.+ +.| .|||----. ..+| ++| +...||++
T Consensus 109 ~~~~~~~~~~t~~~--------~~~~~~~l~~~~~~~---------~~p---~v~vDt~~~~~~~p-l~~--~~~~~v~~ 165 (463)
T PLN02949 109 WIEEETYPRFTMIG--------QSLGSVYLAWEALCK---------FTP---LYFFDTSGYAFTYP-LAR--LFGCKVVC 165 (463)
T ss_pred ccccccCCceehHH--------HHHHHHHHHHHHHHh---------cCC---CEEEeCCCcccHHH-HHH--hcCCcEEE
Confidence 33556788887653 223567777776654 133 478741111 1223 344 44789999
Q ss_pred EEecCCCChHHHhcCCch-------------------HH----H---HH--HhhcCCEEeecChHhHHHHHHHHHHHhCC
Q 002984 228 FLHSPFPSSEIYRTLPVR-------------------DE----I---LR--GLLNCDLIGFHTFDYARHFLSCCSRMLGL 279 (861)
Q Consensus 228 flH~PfP~~e~f~~lp~r-------------------~~----i---l~--~ll~~dligF~t~~~~~~Fl~~~~r~lg~ 279 (861)
++|-|-=+.+....+-.+ +. + +. ..-.+|.|-..+....+++.+ ..
T Consensus 166 yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~----~~-- 239 (463)
T PLN02949 166 YTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEA----LW-- 239 (463)
T ss_pred EEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHH----Hc--
Confidence 999665455433322100 00 0 11 113467776665544444432 11
Q ss_pred ccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHH
Q 002984 280 DYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQL 359 (861)
Q Consensus 280 ~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~l 359 (861)
+...++.++++|+|.+.+... +. +...+++++++|+|+.+.||+...|+||.++
T Consensus 240 --------------~~~~~i~vvyp~vd~~~~~~~---~~---------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l 293 (463)
T PLN02949 240 --------------RIPERIKRVYPPCDTSGLQAL---PL---------ERSEDPPYIISVAQFRPEKAHALQLEAFALA 293 (463)
T ss_pred --------------CCCCCeEEEcCCCCHHHcccC---Cc---------cccCCCCEEEEEEeeeccCCHHHHHHHHHHH
Confidence 111245678889998766311 10 0113467899999999999999999999999
Q ss_pred HHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceeccc
Q 002984 360 LQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAV 439 (861)
Q Consensus 360 l~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~ 439 (861)
+++.++-..++.|+++|... .++..++.+++++++++. +....+.|.+.++.+++.++|+.||++|.||.
T Consensus 294 ~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~l-------~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~ 363 (463)
T PLN02949 294 LEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKEL-------GLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMI 363 (463)
T ss_pred HHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHHc-------CCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCc
Confidence 87543211234599888542 112223344555555442 33345677889999999999999999999999
Q ss_pred ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-C------CceEeCCCCHHHHHHHHHHHhcC
Q 002984 440 RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S------GAIRVNPWDIDAVADAMTLAINM 512 (861)
Q Consensus 440 ~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~------~ai~vnP~d~~~~A~ai~~aL~m 512 (861)
.||||++++||||| +.|+|++..+|..+++ . .|++++ |++++|++|.+++++
T Consensus 364 ~E~FGivvlEAMA~-------------------G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~ 422 (463)
T PLN02949 364 DEHFGISVVEYMAA-------------------GAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRM 422 (463)
T ss_pred cCCCChHHHHHHHc-------------------CCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhC
Confidence 99999999999999 4568999988875433 2 266764 999999999999998
Q ss_pred CHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHHH
Q 002984 513 RDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERAC 548 (861)
Q Consensus 513 ~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 548 (861)
++++++...++.++.+.+++....++++.+.+....
T Consensus 423 ~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 423 RETERLEIAAAARKRANRFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred CHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 888887777788888888999988888887776543
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-18 Score=194.73 Aligned_cols=286 Identities=13% Similarity=0.139 Sum_probs=194.4
Q ss_pred HHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcC---CCeEEEEEecCCCChHHHhcCCc-hHHHHHHhhcCCEEe
Q 002984 184 NKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFN---RIKLGFFLHSPFPSSEIYRTLPV-RDEILRGLLNCDLIG 259 (861)
Q Consensus 184 N~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~---~~~i~~flH~PfP~~e~f~~lp~-r~~il~~ll~~dlig 259 (861)
++.+.+.+ +..+| |+|++|.+.-..++.++..+.. +.++.+.+|-.-.. ....-+. +.-+...+-.+|.|.
T Consensus 73 ~~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii 147 (371)
T cd04962 73 ASKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVT 147 (371)
T ss_pred HHHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEE
Confidence 34444444 55577 8999998766556666554332 57888888843110 1111111 222334456789998
Q ss_pred ecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeE
Q 002984 260 FHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKL 336 (861)
Q Consensus 260 F~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~v 336 (861)
..+....+.+...+ +...++.++|+|+|...+... .. ...++++ .++++
T Consensus 148 ~~s~~~~~~~~~~~--------------------~~~~~i~vi~n~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~ 199 (371)
T cd04962 148 AVSESLRQETYELF--------------------DITKEIEVIPNFVDEDRFRPK-----PD---EALKRRLGAPEGEKV 199 (371)
T ss_pred EcCHHHHHHHHHhc--------------------CCcCCEEEecCCcCHhhcCCC-----ch---HHHHHhcCCCCCCeE
Confidence 88887666554311 111246788999998766421 11 1223333 56889
Q ss_pred EEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEc
Q 002984 337 ILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLID 416 (861)
Q Consensus 337 il~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~ 416 (861)
+++++|+.+.||+..+++|++++.++ ++++ |+.+|. +++..++++.+. + .+..+.+.+.
T Consensus 200 il~~g~l~~~K~~~~li~a~~~l~~~-~~~~----l~i~G~-----g~~~~~~~~~~~----~-------~~~~~~v~~~ 258 (371)
T cd04962 200 LIHISNFRPVKRIDDVIRIFAKVRKE-VPAR----LLLVGD-----GPERSPAERLAR----E-------LGLQDDVLFL 258 (371)
T ss_pred EEEecccccccCHHHHHHHHHHHHhc-CCce----EEEEcC-----CcCHHHHHHHHH----H-------cCCCceEEEe
Confidence 99999999999999999999988655 3344 777773 333334443332 2 1223445566
Q ss_pred CCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceE
Q 002984 417 RPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIR 493 (861)
Q Consensus 417 ~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~ 493 (861)
+.. +++..+|+.||++|+||..||||++++|||+| +.|+|+|+.+|..+.+. .|++
T Consensus 259 g~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~-------------------g~PvI~s~~~~~~e~i~~~~~G~~ 317 (371)
T cd04962 259 GKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMAC-------------------GVPVVASNAGGIPEVVKHGETGFL 317 (371)
T ss_pred cCc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHc-------------------CCCEEEeCCCCchhhhcCCCceEE
Confidence 653 57999999999999999999999999999999 45699999999888773 4799
Q ss_pred eCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhh-hccCCHhHHHHHHHHHHH
Q 002984 494 VNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRY-VSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 494 vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~-v~~~~~~~W~~~fl~~l~ 545 (861)
++|.|++++|++|.++++ .++++....++.+++ ...+++...++.+++-++
T Consensus 318 ~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 318 VDVGDVEAMAEYALSLLE-DDELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred cCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999999999997 444555556666666 456888888888776554
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.8e-19 Score=196.57 Aligned_cols=269 Identities=16% Similarity=0.175 Sum_probs=190.1
Q ss_pred HHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHH
Q 002984 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLS 271 (861)
Q Consensus 192 ~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~ 271 (861)
++..+| |+|++|..+...+..++.+ ..++++.+.+|-.++.... ...+ +..+|.+-+.+....+.+.
T Consensus 74 ~~~~~~--dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~------~~~~---~~~~~~vi~~s~~~~~~~~- 140 (355)
T cd03819 74 IREEKV--DIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFR------YNAI---MARGDRVIAVSNFIADHIR- 140 (355)
T ss_pred HHHcCC--CEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHH------HHHH---HHhcCEEEEeCHHHHHHHH-
Confidence 345566 8999998776555444443 4478999999977654431 1222 3468888777654444433
Q ss_pred HHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccccC
Q 002984 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKG 348 (861)
Q Consensus 272 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KG 348 (861)
...++ ...++.++|+|+|...|...... ......+++++ .++++++++||+...||
T Consensus 141 ---~~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg 199 (355)
T cd03819 141 ---ENYGV---------------DPDRIRVIPRGVDLDRFDPGAVP---PERILALAREWPLPKGKPVILLPGRLTRWKG 199 (355)
T ss_pred ---HhcCC---------------ChhhEEEecCCccccccCccccc---hHHHHHHHHHcCCCCCceEEEEeeccccccC
Confidence 11221 12356778999999887532211 11222245554 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002984 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (861)
Q Consensus 349 i~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 428 (861)
+..+++|+..+.+++++++ |+.+|... ....+.+++.+.+.+. +..+.+.+.+. .+++..+|
T Consensus 200 ~~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~~-------~~~~~v~~~g~--~~~~~~~l 261 (355)
T cd03819 200 QEVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKRL-------GLQDRVTFVGH--CSDMPAAY 261 (355)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHHc-------CCcceEEEcCC--cccHHHHH
Confidence 9999999999988777665 88888432 2233444444443332 22344556665 67899999
Q ss_pred Hhcccceecc-cccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHH
Q 002984 429 AVAECCIVNA-VRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVAD 504 (861)
Q Consensus 429 ~~ADv~vvtS-~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ 504 (861)
+.||++++|| ..||||++.+|||+| +.|+|+|..+|..+.+. .|++++|.|++++++
T Consensus 262 ~~ad~~i~ps~~~e~~~~~l~EA~a~-------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~ 322 (355)
T cd03819 262 ALADIVVSASTEPEAFGRTAVEAQAM-------------------GRPVIASDHGGARETVRPGETGLLVPPGDAEALAQ 322 (355)
T ss_pred HhCCEEEecCCCCCCCchHHHHHHhc-------------------CCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHH
Confidence 9999999999 789999999999999 45689999888877773 489999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHhhhhhccC
Q 002984 505 AMTLAINMRDSEKQLRHEKHYRYVSTH 531 (861)
Q Consensus 505 ai~~aL~m~~~e~~~r~~~~~~~v~~~ 531 (861)
+|..++..+++++....++.++++.++
T Consensus 323 ~i~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 323 ALDQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 999888888888888888888777553
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.7e-18 Score=196.35 Aligned_cols=281 Identities=18% Similarity=0.144 Sum_probs=183.4
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHH---------HhhcCCEEeecChHhHHHH
Q 002984 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILR---------GLLNCDLIGFHTFDYARHF 269 (861)
Q Consensus 199 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~---------~ll~~dligF~t~~~~~~F 269 (861)
.|+|.+|+.... ++ +++. ..+.++.+.+| ||......--.+...+.+ .+-.+|.|-..+......+
T Consensus 95 ~Dvi~~~~~~~~-~~-~~~~-~~~~~~i~~~h--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~ 169 (392)
T cd03805 95 YDVFIVDQVSAC-VP-LLKL-FSPSKILFYCH--FPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVF 169 (392)
T ss_pred CCEEEEcCcchH-HH-HHHH-hcCCcEEEEEe--cChHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHH
Confidence 389999876543 22 2322 22388999999 443321110011111111 1334677766665444333
Q ss_pred HHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCH
Q 002984 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGI 349 (861)
Q Consensus 270 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 349 (861)
... ++. .....+.++|+|+|.+.|......+ ..+......++.++++++|+.+.||+
T Consensus 170 ~~~----~~~--------------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~ 226 (392)
T cd03805 170 KKT----FPS--------------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNI 226 (392)
T ss_pred HHH----hcc--------------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCCh
Confidence 321 110 0111235789999998775321110 11111122567899999999999999
Q ss_pred HHHHHHHHHHHHhC---CCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHH
Q 002984 350 SLKLLAMEQLLQQH---PGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (861)
Q Consensus 350 ~~~l~Af~~ll~~~---P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~a 426 (861)
..+++|++++.++. |+++ |+.+|..... .++..++.+++.+++++. .+....+.|.|.++.+++..
T Consensus 227 ~~ll~a~~~l~~~~~~~~~~~----l~i~G~~~~~-~~~~~~~~~~l~~~~~~~------~~l~~~V~f~g~~~~~~~~~ 295 (392)
T cd03805 227 ALAIEAFAILKDKLAEFKNVR----LVIAGGYDPR-VAENVEYLEELQRLAEEL------LLLEDQVIFLPSISDSQKEL 295 (392)
T ss_pred HHHHHHHHHHHhhcccccCeE----EEEEcCCCCC-CchhHHHHHHHHHHHHHh------cCCCceEEEeCCCChHHHHH
Confidence 99999999998887 6654 8888854321 122234455555555430 23335677888999999999
Q ss_pred HHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHH
Q 002984 427 YYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVA 503 (861)
Q Consensus 427 ly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A 503 (861)
+|+.||++++||..||||++++|||+| |.|+|+|..+|..+.+. .+++++| |++++|
T Consensus 296 ~l~~ad~~l~~s~~E~~g~~~lEAma~-------------------G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a 355 (392)
T cd03805 296 LLSSARALLYTPSNEHFGIVPLEAMYA-------------------GKPVIACNSGGPLETVVDGETGFLCEP-TPEEFA 355 (392)
T ss_pred HHhhCeEEEECCCcCCCCchHHHHHHc-------------------CCCEEEECCCCcHHHhccCCceEEeCC-CHHHHH
Confidence 999999999999999999999999999 55699999988887773 3788877 999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHH
Q 002984 504 DAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARS 539 (861)
Q Consensus 504 ~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~ 539 (861)
++|.++++.++ +++.+.++.++++ ..+++..++++
T Consensus 356 ~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 356 EAMLKLANDPD-LADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHhChH-HHHHHHHHHHHHHHHhcCHHHHhhh
Confidence 99999998654 4555566666666 44777766654
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.8e-19 Score=203.23 Aligned_cols=199 Identities=14% Similarity=0.098 Sum_probs=132.3
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCc
Q 002984 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKT 667 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~ 667 (861)
.++|+|++|+||||++ .++.++++++++|+++ +++|+.|+++|||+...+..++..+. ..++|++||+.|..+++
T Consensus 414 ~~~KLIfsDLDGTLLd---~d~~i~~~t~eAL~~L-~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~ 489 (694)
T PRK14502 414 QFKKIVYTDLDGTLLN---PLTYSYSTALDALRLL-KDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKD 489 (694)
T ss_pred ceeeEEEEECcCCCcC---CCCccCHHHHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCC
Confidence 4579999999999999 6677888999999999 79999999999999999999887764 24699999999998654
Q ss_pred c---------------eEEecCCccChHHHHHHHHHHHHHhh------cCCCceEeeccce-e-------Eeee------
Q 002984 668 S---------------EWETNHLGADLEWKKIVEPVMRSYTE------ATDGSNIEIKESA-L-------VWHH------ 712 (861)
Q Consensus 668 ~---------------~~~~~~~~~~~~w~~~v~~i~~~y~~------~~~gs~ie~k~~~-l-------~~~~------ 712 (861)
. .+...++ ...+++.+..+.+.+.. ...+.++...... . ....
T Consensus 490 ~~~~~~~~~~~~~~~iI~~~~l~--~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~~~~a~~a 567 (694)
T PRK14502 490 YFRLPFAYDRVAGNYLVIELGMA--YKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLNLKQAELA 567 (694)
T ss_pred cccccccccccCCCeEEEEcCCC--HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCCHHHHHHH
Confidence 1 1111111 11223333322221100 0011112111000 0 0000
Q ss_pred --ccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEE--eCCcch
Q 002984 713 --QDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCV--GDDRSD 788 (861)
Q Consensus 713 --~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlai--GD~~ND 788 (861)
+.....+......+.++.+.+.+......+..+..++||. +++|||.|+++|++.+ |++.+++++| ||+.||
T Consensus 568 ~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~---gI~~~eViafalGDs~ND 643 (694)
T PRK14502 568 KQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF---RLNFGNIHTFGLGDSEND 643 (694)
T ss_pred hhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh---CCCccceEEEEcCCcHhh
Confidence 0000011111123455556555555456666799999999 5999999999999999 9999999999 999999
Q ss_pred HHHHHHccc
Q 002984 789 EDMFESILS 797 (861)
Q Consensus 789 ~~Mf~~ag~ 797 (861)
++||+.+|.
T Consensus 644 isMLe~Ag~ 652 (694)
T PRK14502 644 YSMLETVDS 652 (694)
T ss_pred HHHHHhCCc
Confidence 999999996
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-18 Score=192.81 Aligned_cols=275 Identities=17% Similarity=0.147 Sum_probs=199.9
Q ss_pred cCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCCh--HHHh---cCCchHHHHHHhhcCCEEeecChHhHHHH
Q 002984 195 INPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS--EIYR---TLPVRDEILRGLLNCDLIGFHTFDYARHF 269 (861)
Q Consensus 195 ~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~--e~f~---~lp~r~~il~~ll~~dligF~t~~~~~~F 269 (861)
.++ |+||+|.+..... +....++.+.+|-.+|.. +.+. ....+..+...+..+|.+-+.+...++.+
T Consensus 84 ~~~--Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~ 155 (365)
T cd03809 84 LGL--DLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDL 155 (365)
T ss_pred cCC--CeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHH
Confidence 455 9999998887766 556899999999765532 1111 11234445566678899988887666666
Q ss_pred HHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCH
Q 002984 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGI 349 (861)
Q Consensus 270 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 349 (861)
.... +. ...++.++|+|+|...+... .... ........++++|+++||+.+.||+
T Consensus 156 ~~~~----~~---------------~~~~~~vi~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~i~~~G~~~~~K~~ 210 (365)
T cd03809 156 LRYL----GV---------------PPDKIVVIPLGVDPRFRPPP-----AEAE-VLRALYLLPRPYFLYVGTIEPRKNL 210 (365)
T ss_pred HHHh----Cc---------------CHHHEEeeccccCccccCCC-----chHH-HHHHhcCCCCCeEEEeCCCccccCH
Confidence 5421 11 12356678999998776421 1111 1122233678899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002984 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (861)
Q Consensus 350 ~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 429 (861)
...++|+..+.+.+|+++ |+.+|... ........+++ + .+..+.+.+.+.++.+++..+|+
T Consensus 211 ~~~l~~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~~~~ 271 (365)
T cd03809 211 ERLLEAFARLPAKGPDPK----LVIVGKRG----WLNEELLARLR----E-------LGLGDRVRFLGYVSDEELAALYR 271 (365)
T ss_pred HHHHHHHHHHHHhcCCCC----EEEecCCc----cccHHHHHHHH----H-------cCCCCeEEECCCCChhHHHHHHh
Confidence 999999999999888655 88777432 11122222221 1 23346778889999999999999
Q ss_pred hcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-CCceEeCCCCHHHHHHHHHH
Q 002984 430 VAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTL 508 (861)
Q Consensus 430 ~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~ 508 (861)
.||++++||..||+|++++|||+| +.|+|+|+.+|..+.+ .+++.++|.|.++++++|.+
T Consensus 272 ~~d~~l~ps~~e~~~~~~~Ea~a~-------------------G~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~ 332 (365)
T cd03809 272 GARAFVFPSLYEGFGLPVLEAMAC-------------------GTPVIASNISSLPEVAGDAALYFDPLDPEALAAAIER 332 (365)
T ss_pred hhhhhcccchhccCCCCHHHHhcC-------------------CCcEEecCCCCccceecCceeeeCCCCHHHHHHHHHH
Confidence 999999999999999999999999 4568888888877766 56899999999999999999
Q ss_pred HhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHH
Q 002984 509 AINMRDSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (861)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl 541 (861)
+++ +++.+....+..++++..+++..++++++
T Consensus 333 l~~-~~~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 333 LLE-DPALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred Hhc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 986 55555666666677888899999998775
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-18 Score=198.79 Aligned_cols=292 Identities=12% Similarity=0.048 Sum_probs=184.2
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeE-EEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHH
Q 002984 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKL-GFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHF 269 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i-~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~F 269 (861)
++...+| |+|+.|++.-.++..+.... ..+++ ....|. ++...--+.+-... +.+..++++--.+. +..+.
T Consensus 275 ~ir~~rp--DIVHt~~~~a~l~g~laA~l-agvpviv~~~h~-~~~~~~~r~~~~e~---~~~~~a~~i~~~sd-~v~~s 346 (578)
T PRK15490 275 HLCERKL--DYLSVWQDGACLMIALAALI-AGVPRIQLGLRG-LPPVVRKRLFKPEY---EPLYQALAVVPGVD-FMSNN 346 (578)
T ss_pred HHHHcCC--CEEEEcCcccHHHHHHHHHh-cCCCEEEEeecc-cCCcchhhHHHHHH---HHhhhhceeEecch-hhhcc
Confidence 4445577 99999999976655444333 24545 344565 33221111110111 12333444332222 33222
Q ss_pred HHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc-CCCeEEEeecCcccccC
Q 002984 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDIFKG 348 (861)
Q Consensus 270 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~~KG 348 (861)
....+.+.. .+.-...+|.++|+|||+..|.+....+ ......++..+ .+..+|++|+|+.+.||
T Consensus 347 ~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg 412 (578)
T PRK15490 347 HCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKN 412 (578)
T ss_pred HHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcC
Confidence 222221110 0011234678899999998886432111 11122222223 34568899999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002984 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (861)
Q Consensus 349 i~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 428 (861)
....|.|+.++++++|+++ |+++| +|+..+++++. +++ .+..+.+.|.|. .+++..+|
T Consensus 413 ~~~LI~A~a~llk~~pdir----LvIVG-----dG~~~eeLk~l----a~e-------lgL~d~V~FlG~--~~Dv~~~L 470 (578)
T PRK15490 413 PFAWIDFAARYLQHHPATR----FVLVG-----DGDLRAEAQKR----AEQ-------LGILERILFVGA--SRDVGYWL 470 (578)
T ss_pred HHHHHHHHHHHHhHCCCeE----EEEEe-----CchhHHHHHHH----HHH-------cCCCCcEEECCC--hhhHHHHH
Confidence 9999999999999999866 88888 34443444433 333 233455667766 56899999
Q ss_pred HhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC---CCceEeCCCCHHHHHHH
Q 002984 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL---SGAIRVNPWDIDAVADA 505 (861)
Q Consensus 429 ~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~ai~vnP~d~~~~A~a 505 (861)
+.||+||+||.+||||++++|||+| +.|+|+|..+|+.+.+ .+|++|+|.|+++++++
T Consensus 471 aaADVfVlPS~~EGfp~vlLEAMA~-------------------GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~a 531 (578)
T PRK15490 471 QKMNVFILFSRYEGLPNVLIEAQMV-------------------GVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQA 531 (578)
T ss_pred HhCCEEEEcccccCccHHHHHHHHh-------------------CCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHH
Confidence 9999999999999999999999999 4569999999988877 34899999999999998
Q ss_pred HHHHhcCCH--HHHHHHHHHhhhhhc-cCCHhHHHHHHHHHHH
Q 002984 506 MTLAINMRD--SEKQLRHEKHYRYVS-THDVAYWARSFAQDLE 545 (861)
Q Consensus 506 i~~aL~m~~--~e~~~r~~~~~~~v~-~~~~~~W~~~fl~~l~ 545 (861)
+..+..+.. ..+....++.++++. .+++...++.+++-+.
T Consensus 532 i~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~ 574 (578)
T PRK15490 532 CRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIA 574 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 854433222 223334456677764 5888888888776554
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.5e-19 Score=209.37 Aligned_cols=281 Identities=14% Similarity=0.126 Sum_probs=180.9
Q ss_pred HHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEE-EEecCCC---ChHHHhcCCchHHHHHHhhcCCEEeecC-hHhH
Q 002984 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGF-FLHSPFP---SSEIYRTLPVRDEILRGLLNCDLIGFHT-FDYA 266 (861)
Q Consensus 192 ~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~-flH~PfP---~~e~f~~lp~r~~il~~ll~~dligF~t-~~~~ 266 (861)
++..+| |+|++|.+.-.++..+..+. ..+++.+ .+|. +| ..+.++. ....+.+.+..++.+-+-+ ..+.
T Consensus 396 lk~~kp--DIVH~h~~~a~~lg~lAa~~-~gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~ 469 (694)
T PRK15179 396 MRSSVP--SVVHIWQDGSIFACALAALL-AGVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFA 469 (694)
T ss_pred HHHcCC--cEEEEeCCcHHHHHHHHHHH-cCCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHH
Confidence 344467 99999998876666666543 3455544 4454 22 2222210 0111223333344333322 2222
Q ss_pred -HHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc-CCCeEEEeecCcc
Q 002984 267 -RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMD 344 (861)
Q Consensus 267 -~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld 344 (861)
+.+.. .++ ....+|.++|+|||...|.. .+........++... .+.++|++|+|++
T Consensus 470 ~~~l~~----~~g---------------~~~~kI~VI~NGVd~~~f~~---~~~~~~~~~~~~~~~~~~~~vIg~VGRL~ 527 (694)
T PRK15179 470 AHRYAD----WLG---------------VDERRIPVVYNGLAPLKSVQ---DDACTAMMAQFDARTSDARFTVGTVMRVD 527 (694)
T ss_pred HHHHHH----HcC---------------CChhHEEEECCCcCHHhcCC---CchhhHHHHhhccccCCCCeEEEEEEeCC
Confidence 22322 112 12246788999999887742 121111122222222 3467899999999
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHH
Q 002984 345 IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEK 424 (861)
Q Consensus 345 ~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el 424 (861)
+.||+..+|+||.++++++|+++ |+++|. |+..++++ +++++ .+....+.|.|.. .++
T Consensus 528 ~~KG~~~LI~A~a~l~~~~p~~~----LvIvG~-----G~~~~~L~----~l~~~-------lgL~~~V~flG~~--~dv 585 (694)
T PRK15179 528 DNKRPFLWVEAAQRFAASHPKVR----FIMVGG-----GPLLESVR----EFAQR-------LGMGERILFTGLS--RRV 585 (694)
T ss_pred ccCCHHHHHHHHHHHHHHCcCeE----EEEEcc-----CcchHHHH----HHHHH-------cCCCCcEEEcCCc--chH
Confidence 99999999999999999999876 888884 33333343 34433 2344667788775 479
Q ss_pred HHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCH--
Q 002984 425 SAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDI-- 499 (861)
Q Consensus 425 ~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~-- 499 (861)
..+|+.||+||+||.+|||+++++|||+| +.|+|+|..+|+.+.+. .|++|+|.|.
T Consensus 586 ~~ll~aaDv~VlpS~~Egfp~vlLEAMA~-------------------G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~ 646 (694)
T PRK15179 586 GYWLTQFNAFLLLSRFEGLPNVLIEAQFS-------------------GVPVVTTLAGGAGEAVQEGVTGLTLPADTVTA 646 (694)
T ss_pred HHHHHhcCEEEeccccccchHHHHHHHHc-------------------CCeEEEECCCChHHHccCCCCEEEeCCCCCCh
Confidence 99999999999999999999999999999 55689999988888883 4899998885
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHHH
Q 002984 500 DAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQ 542 (861)
Q Consensus 500 ~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl~ 542 (861)
++++++|.+++........ ..++.++++ ..+++...++.+++
T Consensus 647 ~~La~aL~~ll~~l~~~~~-l~~~ar~~a~~~FS~~~~~~~~~~ 689 (694)
T PRK15179 647 PDVAEALARIHDMCAADPG-IARKAADWASARFSLNQMIASTVR 689 (694)
T ss_pred HHHHHHHHHHHhChhccHH-HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 6899999988865432222 234555555 46777777776654
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.9e-18 Score=192.29 Aligned_cols=282 Identities=17% Similarity=0.148 Sum_probs=192.4
Q ss_pred CEEEEeCccccc-HHHHHHhhcCCCeEEEEEecCCCChHHHh-cCC--ch----HHHHHH-hhcCCEEeecChHhHHHHH
Q 002984 200 DCVWVHDYHLMV-LPTFLRKRFNRIKLGFFLHSPFPSSEIYR-TLP--VR----DEILRG-LLNCDLIGFHTFDYARHFL 270 (861)
Q Consensus 200 D~VwvhDyhl~l-lp~~lr~~~~~~~i~~flH~PfP~~e~f~-~lp--~r----~~il~~-ll~~dligF~t~~~~~~Fl 270 (861)
|+|++|...+.. ...++-.+..+.++.+..|--||..-.-. .++ .. ..+.+. +-.+|.|-..+....+.+.
T Consensus 108 Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~ 187 (412)
T PRK10307 108 DRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAR 187 (412)
T ss_pred CEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHH
Confidence 999999866543 33333344445678877776555321100 010 00 111122 2357888888876666553
Q ss_pred HHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCccccc
Q 002984 271 SCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFK 347 (861)
Q Consensus 271 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~K 347 (861)
+ .+ ....++.++|+|||.+.|.... ......+++++ .++++|+++||+.+.|
T Consensus 188 ~-----~~---------------~~~~~i~vi~ngvd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 188 E-----KG---------------VAAEKVIFFPNWSEVARFQPVA-----DADVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred H-----cC---------------CCcccEEEECCCcCHhhcCCCC-----ccchHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 2 11 1223677899999998875321 11123355555 4578999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHH
Q 002984 348 GISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAY 427 (861)
Q Consensus 348 Gi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~al 427 (861)
|+..+++|++++ +++|+++ |+++| +|+..+++++. +++. +... +.|.|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~~~----l~ivG-----~g~~~~~l~~~----~~~~-------~l~~-v~f~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPDLI----FVICG-----QGGGKARLEKM----AQCR-------GLPN-VHFLPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCCeE----EEEEC-----CChhHHHHHHH----HHHc-------CCCc-eEEeCCCCHHHHHHH
Confidence 999999999876 4456544 88887 34444444433 3322 2233 566788999999999
Q ss_pred HHhcccceecccccCCCCc----ceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCC--cccC-CCceEeCCCCHH
Q 002984 428 YAVAECCIVNAVRDGMNLV----PYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC--SPSL-SGAIRVNPWDID 500 (861)
Q Consensus 428 y~~ADv~vvtS~~EG~nLv----~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~l-~~ai~vnP~d~~ 500 (861)
|+.||++|+||..|+++++ .+|||+| +.|+|+|..+|. .+.+ ..|++++|.|++
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~-------------------G~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~ 361 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLAS-------------------GRNVVATAEPGTELGQLVEGIGVCVEPESVE 361 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHc-------------------CCCEEEEeCCCchHHHHHhCCcEEeCCCCHH
Confidence 9999999999999996554 5899999 456889888774 2434 568999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhhhc-cCCHhHHHHHHHHHHHHHH
Q 002984 501 AVADAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWARSFAQDLERAC 548 (861)
Q Consensus 501 ~~A~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~fl~~l~~~~ 548 (861)
++|++|.++++. ++++..+.++.++++. .+++...+++|++.+.+..
T Consensus 362 ~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 362 ALVAAIAALARQ-ALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 999999999874 4556666777787775 5899999999988887653
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.8e-18 Score=196.39 Aligned_cols=271 Identities=14% Similarity=0.082 Sum_probs=180.1
Q ss_pred CCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChH-HHhc----CCchHHHHHHhhcCCEEeecChHhHHHHHHH
Q 002984 198 DDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE-IYRT----LPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (861)
Q Consensus 198 ~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e-~f~~----lp~r~~il~~ll~~dligF~t~~~~~~Fl~~ 272 (861)
+.|+|.++--.... +.++ +..+.+++..++|.-.=+.. .-.. -+.-+..++.+-.+|.|-..|..-.+.....
T Consensus 211 ~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~~~ 288 (500)
T TIGR02918 211 KKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILKNQ 288 (500)
T ss_pred CCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHHHH
Confidence 34898887555433 4444 55668999999995431000 0000 0111223444445677766665443333221
Q ss_pred HHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHH
Q 002984 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (861)
Q Consensus 273 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 352 (861)
... +.+...+|.++|+|++...+. +. ....+..|++|||+.+.||+..+
T Consensus 289 ~~~----------------~~~~~~ki~viP~g~~~~~~~-----~~----------~~r~~~~il~vGrl~~~Kg~~~l 337 (500)
T TIGR02918 289 FKK----------------YYNIEPRIYTIPVGSLDELQY-----PE----------QERKPFSIITASRLAKEKHIDWL 337 (500)
T ss_pred hhh----------------hcCCCCcEEEEcCCCcccccC-----cc----------cccCCeEEEEEeccccccCHHHH
Confidence 111 112234567889998754321 10 01234689999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002984 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAE 432 (861)
Q Consensus 353 l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 432 (861)
|+|+.++.+++|+++ |+++| +|++.++ +++++++. +....+.+.|.. ++..+|+.||
T Consensus 338 i~A~~~l~~~~p~~~----l~i~G-----~G~~~~~----l~~~i~~~-------~l~~~V~f~G~~---~~~~~~~~ad 394 (500)
T TIGR02918 338 VKAVVKAKKSVPELT----FDIYG-----EGGEKQK----LQKIINEN-------QAQDYIHLKGHR---NLSEVYKDYE 394 (500)
T ss_pred HHHHHHHHhhCCCeE----EEEEE-----CchhHHH----HHHHHHHc-------CCCCeEEEcCCC---CHHHHHHhCC
Confidence 999999999999876 88887 3444333 34444332 223456677754 5788999999
Q ss_pred cceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCC-CCcccCC---CceEeCC----CC----HH
Q 002984 433 CCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFI-GCSPSLS---GAIRVNP----WD----ID 500 (861)
Q Consensus 433 v~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~ai~vnP----~d----~~ 500 (861)
++|+||.+||||++++||||| |.|+|+|... |..+.+. +|++|++ .| ++
T Consensus 395 v~v~pS~~Egfgl~~lEAma~-------------------G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~ 455 (500)
T TIGR02918 395 LYLSASTSEGFGLTLMEAVGS-------------------GLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIIT 455 (500)
T ss_pred EEEEcCccccccHHHHHHHHh-------------------CCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHH
Confidence 999999999999999999999 5568998986 6666662 4899973 34 89
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHH
Q 002984 501 AVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 501 ~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 545 (861)
++|++|.++++ +++++...+..++....++...-++.+.+-++
T Consensus 456 ~la~~I~~ll~--~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 456 ALAEKIVEYFN--SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHHHhC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 99999999994 44566677778888888888887777775554
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.1e-18 Score=187.48 Aligned_cols=268 Identities=17% Similarity=0.141 Sum_probs=191.0
Q ss_pred HHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHH
Q 002984 193 EVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (861)
Q Consensus 193 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~ 272 (861)
+..++ |+|++|..+...+..++..+....+..+.+|.+-..... ....+.+.+-.+|.+-..+....+.+.+.
T Consensus 76 ~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~vi~~s~~~~~~l~~~ 148 (355)
T cd03799 76 RRLGI--DHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSP-----DAIDLDEKLARADFVVAISEYNRQQLIRL 148 (355)
T ss_pred HhcCC--CEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccC-----chHHHHHHHhhCCEEEECCHHHHHHHHHh
Confidence 34455 999999877666666666666678899989854221111 11234445567999988888766665541
Q ss_pred HHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHH
Q 002984 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (861)
Q Consensus 273 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 352 (861)
.+ ....++.++|+|+|.+.+.... .....++..|+++||+.+.||+..+
T Consensus 149 ----~~---------------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l 197 (355)
T cd03799 149 ----LG---------------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYL 197 (355)
T ss_pred ----cC---------------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHH
Confidence 01 1234677899999988774211 1122457789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002984 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAE 432 (861)
Q Consensus 353 l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 432 (861)
++|++++.++.|+++ |+.+|. ++...++++.+. +. +..+.+.+.+.++.+++.++|+.||
T Consensus 198 ~~~~~~l~~~~~~~~----l~i~G~-----~~~~~~~~~~~~----~~-------~~~~~v~~~g~~~~~~l~~~~~~ad 257 (355)
T cd03799 198 LEALALLKDRGIDFR----LDIVGD-----GPLRDELEALIA----EL-------GLEDRVTLLGAKSQEEVRELLRAAD 257 (355)
T ss_pred HHHHHHHhhcCCCeE----EEEEEC-----CccHHHHHHHHH----Hc-------CCCCeEEECCcCChHHHHHHHHhCC
Confidence 999999987766654 887773 233233333332 22 3345678889999999999999999
Q ss_pred cceecccc------cCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHH
Q 002984 433 CCIVNAVR------DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVA 503 (861)
Q Consensus 433 v~vvtS~~------EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A 503 (861)
++++||.. ||||++.+|||+| +.|+|+|..+|..+.+. .|++++|.|+++++
T Consensus 258 i~l~~s~~~~~~~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~ 318 (355)
T cd03799 258 LFVLPSVTAADGDREGLPVVLMEAMAM-------------------GLPVISTDVSGIPELVEDGETGLLVPPGDPEALA 318 (355)
T ss_pred EEEecceecCCCCccCccHHHHHHHHc-------------------CCCEEecCCCCcchhhhCCCceEEeCCCCHHHHH
Confidence 99999999 9999999999999 45688898877776662 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHhhhhhc-cCCHhHHHH
Q 002984 504 DAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWAR 538 (861)
Q Consensus 504 ~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~ 538 (861)
++|.++++.+.. +....+..++++. .+++...++
T Consensus 319 ~~i~~~~~~~~~-~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 319 DAIERLLDDPEL-RREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred HHHHHHHhCHHH-HHHHHHHHHHHHHHhcCHHHHhh
Confidence 999999985543 4445555566653 466555543
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.2e-18 Score=188.78 Aligned_cols=274 Identities=19% Similarity=0.173 Sum_probs=181.8
Q ss_pred CEEEEeCccc-ccHHHHHHhhcCCCeEEEEEecCCCChHH-Hh----cCCchHHHHHHhhcCCEEeecChHhHHHHHHHH
Q 002984 200 DCVWVHDYHL-MVLPTFLRKRFNRIKLGFFLHSPFPSSEI-YR----TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCC 273 (861)
Q Consensus 200 D~VwvhDyhl-~llp~~lr~~~~~~~i~~flH~PfP~~e~-f~----~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~ 273 (861)
|+|++|+... ...+.....+..+.++.+..|-.++.... ++ .+.........+-.+|.+.+.+.........
T Consensus 89 dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~-- 166 (375)
T cd03821 89 DIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPHKALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR-- 166 (375)
T ss_pred CEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccccchhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh--
Confidence 9999998432 22333322233568899999976654321 10 0000000111223456666655333322211
Q ss_pred HHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccccCHH
Q 002984 274 SRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGIS 350 (861)
Q Consensus 274 ~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi~ 350 (861)
.+...++.++|+|+|.+.+... +.. .. ++.+ .++++++++||+++.||+.
T Consensus 167 -------------------~~~~~~~~vi~~~~~~~~~~~~---~~~--~~---~~~~~~~~~~~~i~~~G~~~~~K~~~ 219 (375)
T cd03821 167 -------------------LGLKAPIAVIPNGVDIPPFAAL---PSR--GR---RRKFPILPDKRIILFLGRLHPKKGLD 219 (375)
T ss_pred -------------------hCCcccEEEcCCCcChhccCcc---hhh--hh---hhhccCCCCCcEEEEEeCcchhcCHH
Confidence 1123467789999999877521 111 11 2222 5678999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 002984 351 LKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAV 430 (861)
Q Consensus 351 ~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ 430 (861)
.+++|+.++.+++|+++ |+.+|... +.....+ ..++.+ .+..+.+.+.|.++.+++..+|+.
T Consensus 220 ~li~a~~~l~~~~~~~~----l~i~G~~~---~~~~~~~----~~~~~~-------~~~~~~v~~~g~~~~~~~~~~~~~ 281 (375)
T cd03821 220 LLIEAFAKLAERFPDWH----LVIAGPDE---GGYRAEL----KQIAAA-------LGLEDRVTFTGMLYGEDKAAALAD 281 (375)
T ss_pred HHHHHHHHhhhhcCCeE----EEEECCCC---cchHHHH----HHHHHh-------cCccceEEEcCCCChHHHHHHHhh
Confidence 99999999999888766 88887422 1211222 222222 234456778899999999999999
Q ss_pred cccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC-C-ceEeCCCCHHHHHHHHHH
Q 002984 431 AECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-G-AIRVNPWDIDAVADAMTL 508 (861)
Q Consensus 431 ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-ai~vnP~d~~~~A~ai~~ 508 (861)
||++|+||..||||++++|||+| |.|+|+|..+|..+.+. + ++++ |.+.++++++|.+
T Consensus 282 adv~v~ps~~e~~~~~~~Eama~-------------------G~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~ 341 (375)
T cd03821 282 ADLFVLPSHSENFGIVVAEALAC-------------------GTPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAALRR 341 (375)
T ss_pred CCEEEeccccCCCCcHHHHHHhc-------------------CCCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHHHH
Confidence 99999999999999999999999 45699999988887773 3 4444 5567999999999
Q ss_pred HhcCCHHHHHHHHHHhhhh-hccCCHhHHHHHHH
Q 002984 509 AINMRDSEKQLRHEKHYRY-VSTHDVAYWARSFA 541 (861)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~-v~~~~~~~W~~~fl 541 (861)
+++.+ +++....++.+++ ...+++...++.++
T Consensus 342 l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 342 ALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 99876 5566666666666 46677777776654
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.1e-18 Score=191.87 Aligned_cols=272 Identities=14% Similarity=0.098 Sum_probs=190.4
Q ss_pred CCCCCEEEEeCccccc-HHHHHHhhcCCCeEEEEEecC--CCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHH
Q 002984 196 NPDDDCVWVHDYHLMV-LPTFLRKRFNRIKLGFFLHSP--FPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (861)
Q Consensus 196 ~p~~D~VwvhDyhl~l-lp~~lr~~~~~~~i~~flH~P--fP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~ 272 (861)
+++.|+++.|-+|-.. .-.++.++....++....|-. ++.......++.++.+ +-.+|.|-+.+....+.+...
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~~ 201 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQKR 201 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHHH
Confidence 4445777776555433 334566766666788888842 1111111122233333 346899988887665544321
Q ss_pred HHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHH
Q 002984 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (861)
Q Consensus 273 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 352 (861)
.+ ....++.++|+|++...+... ....++..|+++||+.+.||+..+
T Consensus 202 ----~~---------------~~~~ki~vi~~gv~~~~~~~~--------------~~~~~~~~il~~Grl~~~Kg~~~l 248 (407)
T cd04946 202 ----YP---------------AYKEKIKVSYLGVSDPGIISK--------------PSKDDTLRIVSCSYLVPVKRVDLI 248 (407)
T ss_pred ----CC---------------CccccEEEEECCcccccccCC--------------CCCCCCEEEEEeeccccccCHHHH
Confidence 11 122356788999998765311 011457789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh--
Q 002984 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAV-- 430 (861)
Q Consensus 353 l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~-- 430 (861)
++|+.++.+++|+.. +.++.+| +|++..++++.+. + .+..+.+.+.|.++.+|+.++|+.
T Consensus 249 i~a~~~l~~~~p~~~--l~~~iiG-----~g~~~~~l~~~~~----~-------~~~~~~V~f~G~v~~~e~~~~~~~~~ 310 (407)
T cd04946 249 IKALAALAKARPSIK--IKWTHIG-----GGPLEDTLKELAE----S-------KPENISVNFTGELSNSEVYKLYKENP 310 (407)
T ss_pred HHHHHHHHHhCCCce--EEEEEEe-----CchHHHHHHHHHH----h-------cCCCceEEEecCCChHHHHHHHhhcC
Confidence 999999999998764 6677777 3444444444332 1 122346678899999999999986
Q ss_pred cccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCCC---ceEeCC-CCHHHHHHHH
Q 002984 431 AECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSG---AIRVNP-WDIDAVADAM 506 (861)
Q Consensus 431 ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---ai~vnP-~d~~~~A~ai 506 (861)
||+|+.||..|||+++++|||+| |.|+|+|..+|..+.+.+ |++++| .|++++|++|
T Consensus 311 ~~v~v~~S~~Eg~p~~llEAma~-------------------G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I 371 (407)
T cd04946 311 VDVFVNLSESEGLPVSIMEAMSF-------------------GIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSL 371 (407)
T ss_pred CCEEEeCCccccccHHHHHHHHc-------------------CCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHH
Confidence 67899999999999999999999 456999999998888843 588876 4899999999
Q ss_pred HHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHH
Q 002984 507 TLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFA 541 (861)
Q Consensus 507 ~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl 541 (861)
.++++ +++++..+.++.++++ ..++...+.++|+
T Consensus 372 ~~ll~-~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 372 SKFID-NEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHh-CHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99998 5566666677777777 4588888877765
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.5e-18 Score=185.32 Aligned_cols=286 Identities=19% Similarity=0.155 Sum_probs=202.0
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHh----cCCchHHHHHHhhcCCEEeecChHhH
Q 002984 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR----TLPVRDEILRGLLNCDLIGFHTFDYA 266 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~----~lp~r~~il~~ll~~dligF~t~~~~ 266 (861)
+++..++ |+|++|+++...+.. +..+.++.++.+.+|.++|...... ...........+..+|.+-+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 4444466 999999999887776 4455678999999999887543211 11112223333456788888887666
Q ss_pred HHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccc
Q 002984 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIF 346 (861)
Q Consensus 267 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~ 346 (861)
+.+.+.. .....++.++|+|+|...+... . ...........+++.++++||+++.
T Consensus 157 ~~~~~~~-------------------~~~~~~~~~i~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~i~~~g~~~~~ 211 (374)
T cd03801 157 EELRELG-------------------GVPPEKITVIPNGVDTERFRPA-----P-RAARRRLGIPEDEPVILFVGRLVPR 211 (374)
T ss_pred HHHHhcC-------------------CCCCCcEEEecCcccccccCcc-----c-hHHHhhcCCcCCCeEEEEecchhhh
Confidence 6555410 0112367788999998776421 0 1111111112457899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHH
Q 002984 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (861)
Q Consensus 347 KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~a 426 (861)
||+...++|+..+.+++|+++ |+.+| .++....+++.+. + .+..+.+.+.+.++.+|+..
T Consensus 212 k~~~~~i~~~~~~~~~~~~~~----l~i~G-----~~~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~ 271 (374)
T cd03801 212 KGVDLLLEALAKLRKEYPDVR----LVIVG-----DGPLREELEALAA----E-------LGLGDRVTFLGFVPDEDLPA 271 (374)
T ss_pred cCHHHHHHHHHHHhhhcCCeE----EEEEe-----CcHHHHHHHHHHH----H-------hCCCcceEEEeccChhhHHH
Confidence 999999999999988887654 88777 2334344443332 2 12334567788999999999
Q ss_pred HHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHH
Q 002984 427 YYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVA 503 (861)
Q Consensus 427 ly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A 503 (861)
+|+.||++++|+..||+|++++|||+| |.|+|++...|..+.+. .++++++.|+++++
T Consensus 272 ~~~~~di~i~~~~~~~~~~~~~Ea~~~-------------------g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 332 (374)
T cd03801 272 LYAAADVFVLPSLYEGFGLVLLEAMAA-------------------GLPVVASDVGGIPEVVEDGETGLLVPPGDPEALA 332 (374)
T ss_pred HHHhcCEEEecchhccccchHHHHHHc-------------------CCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHH
Confidence 999999999999999999999999999 55689999988888874 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHhh-hhhccCCHhHHHHHHHHHH
Q 002984 504 DAMTLAINMRDSEKQLRHEKHY-RYVSTHDVAYWARSFAQDL 544 (861)
Q Consensus 504 ~ai~~aL~m~~~e~~~r~~~~~-~~v~~~~~~~W~~~fl~~l 544 (861)
++|.++++.++. +....++.+ .....+++..+++.+.+.+
T Consensus 333 ~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 333 EAILRLLDDPEL-RRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHcChHH-HHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 999999985543 344444444 4566789999988877643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.3e-18 Score=187.05 Aligned_cols=274 Identities=17% Similarity=0.142 Sum_probs=191.1
Q ss_pred HHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCch----HHHHH-HhhcCCEEeecChHhHH
Q 002984 193 EVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVR----DEILR-GLLNCDLIGFHTFDYAR 267 (861)
Q Consensus 193 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r----~~il~-~ll~~dligF~t~~~~~ 267 (861)
+..+| |+|++|......+...+..+..++++.+.+|..||..-........ ..+.+ ..-.+|.+-+.+.....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 55677 8999996654433333333345688999999888733221111111 12222 22457888877776555
Q ss_pred HHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHH--cCCCeEEEeecCccc
Q 002984 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQ--FDGKKLILGIDDMDI 345 (861)
Q Consensus 268 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~--~~~~~vil~Vdrld~ 345 (861)
.+.. . + ...+.++|+|+|...|..... .. ..+++ ..++++++++||+.+
T Consensus 158 ~~~~--------------------~-~-~~~~~~~~~g~~~~~~~~~~~---~~----~~~~~~~~~~~~~i~~~G~~~~ 208 (364)
T cd03814 158 ELRA--------------------R-G-FRRVRLWPRGVDTELFHPRRR---DE----ALRARLGPPDRPVLLYVGRLAP 208 (364)
T ss_pred HHhc--------------------c-C-CCceeecCCCccccccCcccc---cH----HHHHHhCCCCCeEEEEEecccc
Confidence 2221 0 0 124577899999887753211 11 11222 246789999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002984 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (861)
Q Consensus 346 ~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~ 425 (861)
.||+...++|+..+.++ |+++ |+.+|. +++...++ +..+-+.+.+.++.+++.
T Consensus 209 ~k~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~-----------------~~~~~v~~~g~~~~~~~~ 261 (364)
T cd03814 209 EKNLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE-----------------ARYPNVHFLGFLDGEELA 261 (364)
T ss_pred ccCHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh-----------------ccCCcEEEEeccCHHHHH
Confidence 99999999999999877 7665 887773 23322222 011345667779999999
Q ss_pred HHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHH
Q 002984 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAV 502 (861)
Q Consensus 426 aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~ 502 (861)
.+|+.||++++||..||+|++++|||+| +.|+|+|..+|..+.+. .|++++|.|.+++
T Consensus 262 ~~~~~~d~~l~~s~~e~~~~~~lEa~a~-------------------g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l 322 (364)
T cd03814 262 AAYASADVFVFPSRTETFGLVVLEAMAS-------------------GLPVVAPDAGGPADIVTDGENGLLVEPGDAEAF 322 (364)
T ss_pred HHHHhCCEEEECcccccCCcHHHHHHHc-------------------CCCEEEcCCCCchhhhcCCcceEEcCCCCHHHH
Confidence 9999999999999999999999999999 55699999999888884 4899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHH
Q 002984 503 ADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDL 544 (861)
Q Consensus 503 A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l 544 (861)
+++|.++++. ++++..+.+..++++..+++..+++.+++-+
T Consensus 323 ~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 323 AAALAALLAD-PELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHcC-HHHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 9999999974 4555566667777777889998888877543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.8e-18 Score=179.64 Aligned_cols=190 Identities=17% Similarity=0.108 Sum_probs=118.5
Q ss_pred EEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCc----
Q 002984 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKT---- 667 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~---- 667 (861)
+|++|+||||++ .+. ++++++++|+++ ++.|+.++++|||++..+..++..+. ..++|++||+.|..+..
T Consensus 1 li~~DlDGTLl~---~~~-~~~~~~~ai~~l-~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~ 75 (225)
T TIGR02461 1 VIFTDLDGTLLP---PGY-EPGPAREALEEL-KDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPF 75 (225)
T ss_pred CEEEeCCCCCcC---CCC-CchHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccc
Confidence 589999999999 443 556799999999 78999999999999999999887664 34699999999988532
Q ss_pred -----------ceEEecCCccChHHHHHHHHHHHHHhhcCCCceEee---cc----ceeEeeeccC--Cc---cchhccH
Q 002984 668 -----------SEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEI---KE----SALVWHHQDA--DP---DFGSCQA 724 (861)
Q Consensus 668 -----------~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~---k~----~~l~~~~~~~--d~---~~~~~~a 724 (861)
..+...++. +.++.+++...+..+-.++.. .+ ..+.....+. +. ++.....
T Consensus 76 ~~~~~~~~~~~~i~~~~l~~------~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~ 149 (225)
T TIGR02461 76 PVGAGREVGNYEVIELGKPV------AKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLWS 149 (225)
T ss_pred cccccccCCCeEEEEcCCCH------HHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCCC
Confidence 133333321 222333322211111000000 00 0000000000 00 0000111
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCC--CCCeEEEEeCCcchHHHHHHccc
Q 002984 725 KELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGR--PPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 725 ~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi--~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.+.+..+.+.+....+.+..+..++++. +++||+.|++.+++.+ ++ +.+++++|||+.||++||+.+|.
T Consensus 150 ~e~~~~~~~~~~~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~---~~~~~~~~~i~~GD~~nD~~ml~~ag~ 220 (225)
T TIGR02461 150 REGWEAILVTARARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLY---KLRPGAIESVGLGDSENDFPMFEVVDL 220 (225)
T ss_pred HHHHHHHHHHHHHcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHh---ccccCcccEEEEcCCHHHHHHHHhCCC
Confidence 2223333333333445566666777764 5999999999999998 65 66689999999999999999996
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.1e-18 Score=187.51 Aligned_cols=283 Identities=18% Similarity=0.180 Sum_probs=190.1
Q ss_pred HHHcCCCCCEEEEeCcc-cc---cHHHHHH-hhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhH
Q 002984 192 MEVINPDDDCVWVHDYH-LM---VLPTFLR-KRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYA 266 (861)
Q Consensus 192 ~~~~~p~~D~VwvhDyh-l~---llp~~lr-~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~ 266 (861)
+...+| |+|++|+.+ ++ ......+ .+..+.++.+.+|.+.|...... ...-...-+-.+|.|-+.+.+.+
T Consensus 72 ~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---~~~~~~~~~~~~d~ii~~s~~~~ 146 (366)
T cd03822 72 IRLSGP--DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPG---DRALLRLLLRRADAVIVMSSELL 146 (366)
T ss_pred HhhcCC--CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccchh---hhHHHHHHHhcCCEEEEeeHHHH
Confidence 344466 899998732 21 1111111 12367899999998622221111 11112223346899888875555
Q ss_pred HHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccc
Q 002984 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIF 346 (861)
Q Consensus 267 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~ 346 (861)
++++... ...++.++|+|++...+... . . . +......++++|+++||+.+.
T Consensus 147 ~~~~~~~---------------------~~~~~~~i~~~~~~~~~~~~-----~-~-~-~~~~~~~~~~~i~~~G~~~~~ 197 (366)
T cd03822 147 RALLLRA---------------------YPEKIAVIPHGVPDPPAEPP-----E-S-L-KALGGLDGRPVLLTFGLLRPY 197 (366)
T ss_pred HHHHhhc---------------------CCCcEEEeCCCCcCcccCCc-----h-h-h-HhhcCCCCCeEEEEEeeccCC
Confidence 5554310 02366788999997765321 1 1 1 111122567899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCC-CCHHHHH
Q 002984 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRP-VPRFEKS 425 (861)
Q Consensus 347 KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~-v~~~el~ 425 (861)
||+..+++|++.+.+++|+++ |+.+|... +.....+.+..+++.+ .+..+.+.+.+. ++.+++.
T Consensus 198 K~~~~ll~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~-------~~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 198 KGLELLLEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAER-------LGLADRVIFINRYLPDEELP 262 (366)
T ss_pred CCHHHHHHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHh-------cCCCCcEEEecCcCCHHHHH
Confidence 999999999999998888765 88777432 1111111110111222 233344555544 9999999
Q ss_pred HHHHhcccceeccccc--CCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC---CCceEeCCCCHH
Q 002984 426 AYYAVAECCIVNAVRD--GMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL---SGAIRVNPWDID 500 (861)
Q Consensus 426 aly~~ADv~vvtS~~E--G~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~ai~vnP~d~~ 500 (861)
.+|+.||++++||..| |++++++|||+| +.|+|+|..+| .+.+ ..+++++|.|++
T Consensus 263 ~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~-------------------G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~ 322 (366)
T cd03822 263 ELFSAADVVVLPYRSADQTQSGVLAYAIGF-------------------GKPVISTPVGH-AEEVLDGGTGLLVPPGDPA 322 (366)
T ss_pred HHHhhcCEEEecccccccccchHHHHHHHc-------------------CCCEEecCCCC-hheeeeCCCcEEEcCCCHH
Confidence 9999999999999999 999999999999 45689999888 6666 358999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHH
Q 002984 501 AVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDL 544 (861)
Q Consensus 501 ~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l 544 (861)
++|++|..+++.+ +++..+.++.++++.++++..+++.+.+.+
T Consensus 323 ~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 323 ALAEAIRRLLADP-ELAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHHHHHHHHcCh-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 9999999999844 445566677788888899999999887643
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.7e-18 Score=187.37 Aligned_cols=268 Identities=18% Similarity=0.241 Sum_probs=185.1
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchH----------HHHHHhhcCCEEee
Q 002984 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRD----------EILRGLLNCDLIGF 260 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~----------~il~~ll~~dligF 260 (861)
+.+..+| |+|++|+...+........+..+.++.+.+|.+|+.. ....+... -....+..+|.+-+
T Consensus 79 ~~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~ 154 (374)
T cd03817 79 ILKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDY--THYVPLGRLLARAVVRRKLSRRFYNRCDAVIA 154 (374)
T ss_pred HHhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHH--HHHHhcccchhHHHHHHHHHHHHhhhCCEEEe
Confidence 3455676 8999998765544444444445789999999887632 22222111 11123345788877
Q ss_pred cChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEE
Q 002984 261 HTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLI 337 (861)
Q Consensus 261 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vi 337 (861)
.+......+.. . +....+.++|+|+|...+.... ... .++.+ .++++|
T Consensus 155 ~s~~~~~~~~~-----~----------------~~~~~~~vi~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~i 205 (374)
T cd03817 155 PSEKIADLLRE-----Y----------------GVKRPIEVIPTGIDLDRFEPVD----GDD----ERRKLGIPEDEPVL 205 (374)
T ss_pred ccHHHHHHHHh-----c----------------CCCCceEEcCCccchhccCccc----hhH----HHHhcCCCCCCeEE
Confidence 77654443332 0 1112477899999987764221 111 12222 467889
Q ss_pred EeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcC
Q 002984 338 LGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDR 417 (861)
Q Consensus 338 l~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~ 417 (861)
+++||+.+.||+..+++|++.+.++.|+++ |+.+|. ++...++ .+++.+. +..+.+.+.+
T Consensus 206 ~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~----l~i~G~-----~~~~~~~----~~~~~~~-------~~~~~v~~~g 265 (374)
T cd03817 206 LYVGRLAKEKNIDFLIRAFARLLKEEPDVK----LVIVGD-----GPEREEL----EELAREL-------GLADRVIFTG 265 (374)
T ss_pred EEEeeeecccCHHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHH----HHHHHHc-------CCCCcEEEec
Confidence 999999999999999999999988767654 887773 2332333 3333222 2335667888
Q ss_pred CCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEe
Q 002984 418 PVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRV 494 (861)
Q Consensus 418 ~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~v 494 (861)
.++.+++..+|+.||++++||..||+|++.+|||+| +.|+|++..+|..+.+. .|+++
T Consensus 266 ~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~-------------------g~PvI~~~~~~~~~~i~~~~~g~~~ 326 (374)
T cd03817 266 FVPREELPDYYKAADLFVFASTTETQGLVLLEAMAA-------------------GLPVVAVDAPGLPDLVADGENGFLF 326 (374)
T ss_pred cCChHHHHHHHHHcCEEEecccccCcChHHHHHHHc-------------------CCcEEEeCCCChhhheecCceeEEe
Confidence 999999999999999999999999999999999999 45689999888877773 48999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCC
Q 002984 495 NPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHD 532 (861)
Q Consensus 495 nP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~ 532 (861)
++.|. +++++|.+++++++.. +.+.++.++++..++
T Consensus 327 ~~~~~-~~~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~ 362 (374)
T cd03817 327 PPGDE-ALAEALLRLLQDPELR-RRLSKNAEESAEKFS 362 (374)
T ss_pred CCCCH-HHHHHHHHHHhChHHH-HHHHHHHHHHHHHHH
Confidence 99888 9999999999866543 455566666666554
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=184.45 Aligned_cols=282 Identities=21% Similarity=0.208 Sum_probs=196.6
Q ss_pred HcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHH
Q 002984 194 VINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCC 273 (861)
Q Consensus 194 ~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~ 273 (861)
..++ |+|++|......+...+..+....++.+..|.+++....... ..+......+-.+|.+-+.+....+.+....
T Consensus 91 ~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 167 (377)
T cd03798 91 RFRP--DLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG 167 (377)
T ss_pred cCCC--CEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc
Confidence 4455 899999555544444444444557899999987764332211 2233344455678999998887666665411
Q ss_pred HHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHH
Q 002984 274 SRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKL 353 (861)
Q Consensus 274 ~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l 353 (861)
....++.++|+|+|...+.... ...... .....+++.++++|++++.||+..++
T Consensus 168 --------------------~~~~~~~~i~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~i~~~g~~~~~k~~~~li 221 (377)
T cd03798 168 --------------------IDPEKVTVIPNGVDTERFSPAD-----RAEARK-LGLPEDKKVILFVGRLVPRKGIDYLI 221 (377)
T ss_pred --------------------CCCCceEEcCCCcCcccCCCcc-----hHHHHh-ccCCCCceEEEEeccCccccCHHHHH
Confidence 1123567889999988764211 111111 11225678999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccc
Q 002984 354 LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAEC 433 (861)
Q Consensus 354 ~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv 433 (861)
+|++.+.+++|+++ |+.+|. ++....+++.++ . .+..+.+.+.+.++.+++..+|+.||+
T Consensus 222 ~~~~~~~~~~~~~~----l~i~g~-----~~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~~~~~ad~ 281 (377)
T cd03798 222 EALARLLKKRPDVH----LVIVGD-----GPLREALEALAA----E-------LGLEDRVTFLGAVPHEEVPAYYAAADV 281 (377)
T ss_pred HHHHHHHhcCCCeE----EEEEcC-----CcchHHHHHHHH----h-------cCCcceEEEeCCCCHHHHHHHHHhcCe
Confidence 99999988877654 777763 233333333322 1 334466778889999999999999999
Q ss_pred ceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHh
Q 002984 434 CIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAI 510 (861)
Q Consensus 434 ~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL 510 (861)
++.||..||+|++++|||+| |.|+|+|+.+|..+.+. .|++++|.|+++++++|.+++
T Consensus 282 ~i~~~~~~~~~~~~~Ea~~~-------------------G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~ 342 (377)
T cd03798 282 FVLPSLREGFGLVLLEAMAC-------------------GLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLL 342 (377)
T ss_pred eecchhhccCChHHHHHHhc-------------------CCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHh
Confidence 99999999999999999999 45689999888877773 358999999999999999999
Q ss_pred cCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHH
Q 002984 511 NMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 511 ~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 545 (861)
+.+.. ....+........+++..+++.+.+.++
T Consensus 343 ~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 343 ADPWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 87654 2222333344455788888887776554
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.6e-18 Score=193.72 Aligned_cols=185 Identities=11% Similarity=0.019 Sum_probs=124.3
Q ss_pred EEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecC-c-ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 002984 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDD-M-DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQI 375 (861)
Q Consensus 298 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdr-l-d~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi 375 (861)
++.++|+|||++.+... ++. ...+ ...++++|++|+| + ++.||+..+++|+.++ .+ ++.|+++
T Consensus 213 ~i~vI~NGid~~~~~~~---~~~----~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~iv 277 (405)
T PRK10125 213 RCRIINNGIDMATEAIL---AEL----PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHTF 277 (405)
T ss_pred CEEEeCCCcCccccccc---ccc----cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEEE
Confidence 67889999997543211 000 0001 1246788999999 4 4789999999999875 23 3558888
Q ss_pred ecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeec
Q 002984 376 VNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQ 455 (861)
Q Consensus 376 ~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~ 455 (861)
|... ... . ..+.++....+..++..+|+.||+||+||..||||++++|||||
T Consensus 278 G~g~-----~~~--~-------------------~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~-- 329 (405)
T PRK10125 278 GKFS-----PFT--A-------------------GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI-- 329 (405)
T ss_pred cCCC-----ccc--c-------------------cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc--
Confidence 8421 100 0 02333322236789999999999999999999999999999999
Q ss_pred CCCcccccccCCCCCCCCceEEeccCCCCcccCC--CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhh-hccCC
Q 002984 456 GTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS--GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRY-VSTHD 532 (861)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~-v~~~~ 532 (861)
+.|+|+|+.+|+.+.+. +|++|+|.|++++|+++...+.. .+.....++.++. ...++
T Consensus 330 -----------------G~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~--~~~~~~~~~~r~~~~~~fs 390 (405)
T PRK10125 330 -----------------GVPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQ--AVFGTTLAEFSQRSRAAYS 390 (405)
T ss_pred -----------------CCCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHH--HhhhhHHHHHHHHHHHhCC
Confidence 56699999999877773 59999999999999865433221 0000011223333 34588
Q ss_pred HhHHHHHHHHHH
Q 002984 533 VAYWARSFAQDL 544 (861)
Q Consensus 533 ~~~W~~~fl~~l 544 (861)
....++++++-.
T Consensus 391 ~~~~~~~y~~lY 402 (405)
T PRK10125 391 GQQMLEEYVNFY 402 (405)
T ss_pred HHHHHHHHHHHH
Confidence 888888776544
|
|
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.2e-17 Score=182.39 Aligned_cols=282 Identities=16% Similarity=0.165 Sum_probs=190.9
Q ss_pred HHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHh-hcCCEEeecChHhHHHHH
Q 002984 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGL-LNCDLIGFHTFDYARHFL 270 (861)
Q Consensus 192 ~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~l-l~~dligF~t~~~~~~Fl 270 (861)
++..+| |+|++|+++......++.......++.+..|.-++... -........+.+-+ -.+|.+-..+......+.
T Consensus 76 ~~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 152 (365)
T cd03807 76 IRRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG-KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQ 152 (365)
T ss_pred HHhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc-chhHhHHHHHHHHhccccCeEEeccHHHHHHHH
Confidence 344566 89999999977777766665467889999997665432 00001111122222 235666444443333332
Q ss_pred HHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCccccc
Q 002984 271 SCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFK 347 (861)
Q Consensus 271 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~K 347 (861)
.. +. ...++.++|+|+|...+..... ....+++++ .++++++++||+++.|
T Consensus 153 ~~-----~~---------------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K 206 (365)
T cd03807 153 AI-----GY---------------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQK 206 (365)
T ss_pred Hc-----CC---------------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhc
Confidence 20 11 1225667899999887642211 112233344 4678899999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHH
Q 002984 348 GISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAY 427 (861)
Q Consensus 348 Gi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~al 427 (861)
|+..+++|+..+.+++|+++ |+.+|... .....+.... .+ .+..+.+.+.+. .+++..+
T Consensus 207 ~~~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~~~~~~---~~-------~~~~~~v~~~g~--~~~~~~~ 265 (365)
T cd03807 207 DHATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANLELLAL---KE-------LGLEDKVILLGE--RSDVPAL 265 (365)
T ss_pred CHHHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHHHHHHH---Hh-------cCCCceEEEccc--cccHHHH
Confidence 99999999999998888765 88777432 2222222111 01 223345556554 5689999
Q ss_pred HHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC-CceEeCCCCHHHHHHHH
Q 002984 428 YAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-GAIRVNPWDIDAVADAM 506 (861)
Q Consensus 428 y~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~vnP~d~~~~A~ai 506 (861)
|+.||++++||..||+|++++|||+| +.|+|+|+.+|..+.+. .|+++++.|+++++++|
T Consensus 266 ~~~adi~v~ps~~e~~~~~~~Ea~a~-------------------g~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i 326 (365)
T cd03807 266 LNALDVFVLSSLSEGFPNVLLEAMAC-------------------GLPVVATDVGDNAELVGDTGFLVPPGDPEALAEAI 326 (365)
T ss_pred HHhCCEEEeCCccccCCcHHHHHHhc-------------------CCCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHH
Confidence 99999999999999999999999999 45689999998888875 48999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHhhhhhcc-CCHhHHHHHHHHH
Q 002984 507 TLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQD 543 (861)
Q Consensus 507 ~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~fl~~ 543 (861)
.++++.+ +++....++.++++.+ +++...++.+.+-
T Consensus 327 ~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 327 EALLADP-ALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHHhCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999866 4555556666777654 7888888877653
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-17 Score=184.00 Aligned_cols=278 Identities=18% Similarity=0.198 Sum_probs=195.2
Q ss_pred HcCCCCCEEEEeC-cccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCc--------hHHH-HHHhhcCCEEeecCh
Q 002984 194 VINPDDDCVWVHD-YHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPV--------RDEI-LRGLLNCDLIGFHTF 263 (861)
Q Consensus 194 ~~~p~~D~VwvhD-yhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~--------r~~i-l~~ll~~dligF~t~ 263 (861)
..+| |+|++|. ..+..++....++..+.++.+.+|..||.......... ...+ -..+..+|.+-+.+.
T Consensus 97 ~~~~--D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~ 174 (394)
T cd03794 97 RRRP--DVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISP 174 (394)
T ss_pred ccCC--CEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECH
Confidence 3455 8999998 44556666666666689999999998875433211111 1111 123456899998888
Q ss_pred HhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCc
Q 002984 264 DYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDM 343 (861)
Q Consensus 264 ~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrl 343 (861)
..++.+.. .+ ....++.++|+|++...+..... ...... .....++.+++++||+
T Consensus 175 ~~~~~~~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~i~~~G~~ 229 (394)
T cd03794 175 GMREYLVR-----RG---------------VPPEKISVIPNGVDLELFKPPPA----DESLRK-ELGLDDKFVVLYAGNI 229 (394)
T ss_pred HHHHHHHh-----cC---------------CCcCceEEcCCCCCHHHcCCccc----hhhhhh-ccCCCCcEEEEEecCc
Confidence 77776652 01 12235678999999877653211 111111 1122578899999999
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHH
Q 002984 344 DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFE 423 (861)
Q Consensus 344 d~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~e 423 (861)
...||+..+++|+.++.+. |+++ |+.+|. ++....+++.+. . .+...+ .+.+.++.++
T Consensus 230 ~~~k~~~~l~~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~~~~~----~-------~~~~~v-~~~g~~~~~~ 287 (394)
T cd03794 230 GRAQGLDTLLEAAALLKDR-PDIR----FLIVGD-----GPEKEELKELAK----A-------LGLDNV-TFLGRVPKEE 287 (394)
T ss_pred ccccCHHHHHHHHHHHhhc-CCeE----EEEeCC-----cccHHHHHHHHH----H-------cCCCcE-EEeCCCChHH
Confidence 9999999999999998776 6554 777773 333334433221 1 122234 4555899999
Q ss_pred HHHHHHhcccceecccccCC-----CCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeC
Q 002984 424 KSAYYAVAECCIVNAVRDGM-----NLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVN 495 (861)
Q Consensus 424 l~aly~~ADv~vvtS~~EG~-----nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vn 495 (861)
+.++|+.||++++||..|++ +++.+|||+| |.|+|++..+|..+.+. .|++++
T Consensus 288 ~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~-------------------G~pvi~~~~~~~~~~~~~~~~g~~~~ 348 (394)
T cd03794 288 LPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAA-------------------GKPVLASVDGESAELVEEAGAGLVVP 348 (394)
T ss_pred HHHHHHhhCeeEEeccCcccccccCchHHHHHHHC-------------------CCcEEEecCCCchhhhccCCcceEeC
Confidence 99999999999999999976 5557999999 56699999999988883 489999
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhc-cCCHhHHHHHH
Q 002984 496 PWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWARSF 540 (861)
Q Consensus 496 P~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~f 540 (861)
+.|+++++++|.++++ +++++..+.++.++++. .+++..+++++
T Consensus 349 ~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 349 PGDPEALAAAILELLD-DPEERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred CCCHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 9999999999999995 45666666777777776 68888888765
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.1e-17 Score=184.04 Aligned_cols=352 Identities=14% Similarity=0.161 Sum_probs=201.4
Q ss_pred ccccccccccCCCCCCCCCCccChHhHHHHHH--HHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEE
Q 002984 151 KQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVS--ANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFF 228 (861)
Q Consensus 151 ~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~--vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~f 228 (861)
+.-||-.|+--.+ .....+++..-=.|.. +=..|+..+.. . .-|+++.||.+.-....+||++.++++..|+
T Consensus 105 ~~~lW~~~~i~s~---~~~~d~nea~~fgy~~~~~i~~~~~~~~~--~-~~dViH~HeWm~g~a~~~lK~~~~~VptVfT 178 (590)
T cd03793 105 KGELWELCGIGSP---EGDRETNDAIIFGFLVAWFLGEFAEQFDD--E-PAVVAHFHEWQAGVGLPLLRKRKVDVSTIFT 178 (590)
T ss_pred HHHHHHHcCCCCC---CCCCcchHHHHHHHHHHHHHHHHHhhccC--C-CCeEEEEcchhHhHHHHHHHHhCCCCCEEEE
Confidence 3458999886533 2223454443333421 12233332111 2 2489999999999999999988899999999
Q ss_pred EecCCCChHHHhcCCchHHHHHHhhcCCEEeecCh--------------HhHHHHHHHH-----HHHhCCccccCCCeee
Q 002984 229 LHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTF--------------DYARHFLSCC-----SRMLGLDYESKRGHIG 289 (861)
Q Consensus 229 lH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~--------------~~~~~Fl~~~-----~r~lg~~~~~~~~~~~ 289 (861)
.|.. +.-|.|- +.+ ..|++. -+.++.++.. ++++.++....+. .
T Consensus 179 tHAT----~~GR~l~----------~g~-~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~E--~ 241 (590)
T cd03793 179 THAT----LLGRYLC----------AGN-VDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAYE--A 241 (590)
T ss_pred eccc----ccccccc----------cCC-cccchhhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHHH--H
Confidence 9943 2222210 111 111110 0223333211 1111111100000 0
Q ss_pred EEecCeEEEEEEecccCCchHHHHhhCCc----hhHHHHH-----HHHHHc---CCCeEEEe-ecCccc-ccCHHHHHHH
Q 002984 290 LDYFGRTVYIKILPVGVHMGRLESVLNLP----ATATKIK-----EIEKQF---DGKKLILG-IDDMDI-FKGISLKLLA 355 (861)
Q Consensus 290 ~~~~gr~~~i~v~p~GId~~~~~~~~~~~----~~~~~~~-----~l~~~~---~~~~vil~-Vdrld~-~KGi~~~l~A 355 (861)
...+++...+ |+|+|||++.|.....-. ...+++. .++.+| .+++++++ +||+++ .||++.+|+|
T Consensus 242 ~~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeA 320 (590)
T cd03793 242 EHLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEA 320 (590)
T ss_pred HHHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHH
Confidence 1123444333 899999999986432100 1111222 235544 36788888 899999 9999999999
Q ss_pred HHHHHHhCCC-CCCcEEEEEEecCCCCCh---------hHHHHHHHHHHHHHHHHhhc---------c------------
Q 002984 356 MEQLLQQHPG-MRGKVVLVQIVNPARGSG---------KDVQEAKKETYLTAKRINEV---------Y------------ 404 (861)
Q Consensus 356 f~~ll~~~P~-~~~~vvLvqi~~p~r~~~---------~~~~~~~~~v~~l~~~IN~~---------~------------ 404 (861)
+.++-..-.. -.++.|+..+..|+...+ .-..+++..+.++..+|..+ .
T Consensus 321 l~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~ 400 (590)
T cd03793 321 LARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDK 400 (590)
T ss_pred HHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhH
Confidence 9987552111 112233334445554332 22344556666665666555 1
Q ss_pred -----------------------------------------CC-CCcccEEEEcCCCC------HHHHHHHHHhccccee
Q 002984 405 -----------------------------------------GS-PNYEPVVLIDRPVP------RFEKSAYYAVAECCIV 436 (861)
Q Consensus 405 -----------------------------------------~~-~~~~pvv~~~~~v~------~~el~aly~~ADv~vv 436 (861)
.. .+...||+....++ ..+...+|+.||+||+
T Consensus 401 ~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~ 480 (590)
T cd03793 401 VMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVF 480 (590)
T ss_pred HHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEe
Confidence 00 12223444333222 3357889999999999
Q ss_pred cccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCc----ccCC----CceEeC-------CCCHHH
Q 002984 437 NAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS----PSLS----GAIRVN-------PWDIDA 501 (861)
Q Consensus 437 tS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l~----~ai~vn-------P~d~~~ 501 (861)
||.+||||++++||||| +.|+|+|..+|.. +.+. .|+.|. +.++++
T Consensus 481 PS~yE~fG~~~lEAma~-------------------G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~ 541 (590)
T cd03793 481 PSYYEPWGYTPAECTVM-------------------GIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQ 541 (590)
T ss_pred ccccCCCCcHHHHHHHc-------------------CCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHH
Confidence 99999999999999999 5669999999984 3332 378887 566788
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHH
Q 002984 502 VADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 502 ~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 545 (861)
+|++|.+.++++..++........+.....++.+-+..+++.-.
T Consensus 542 La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 542 LTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999998876544443333333355555676666665555433
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.8e-18 Score=187.21 Aligned_cols=193 Identities=16% Similarity=0.190 Sum_probs=140.0
Q ss_pred ecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC
Q 002984 302 LPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARG 381 (861)
Q Consensus 302 ~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~ 381 (861)
+|.|||.+.|.+... ...+.++.+...+.+..++++|+|+++.||+..+++|++++.+++|++..++.|+.+|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 467999998853210 01111222222234677899999999999999999999999999999876777876651
Q ss_pred ChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEc---CCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCC
Q 002984 382 SGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLID---RPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458 (861)
Q Consensus 382 ~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~---~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~ 458 (861)
. .+ . + .+....+.+. +.++.+++.++|+.||+||+||..||||++++|||+|
T Consensus 192 --~---~~----~----~-------l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~----- 246 (335)
T PHA01633 192 --K---QF----T----Q-------LEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAM----- 246 (335)
T ss_pred --H---HH----H----H-------cCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHc-----
Confidence 1 11 1 1 1112223343 6778999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCceEEeccCCCCcccCCC---------------------ceEeCCCCHHHHHHHHHHHhcCCHHHH
Q 002984 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSLSG---------------------AIRVNPWDIDAVADAMTLAINMRDSEK 517 (861)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---------------------ai~vnP~d~~~~A~ai~~aL~m~~~e~ 517 (861)
|.|+|+|..+|..+..++ ++.++++|++++|++|.+++.+++.+.
T Consensus 247 --------------G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~~ 312 (335)
T PHA01633 247 --------------GTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDREE 312 (335)
T ss_pred --------------CCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccChhh
Confidence 456888888776664321 457788999999999999988764333
Q ss_pred HHHHHHhhhhhccCCHhHHHHHHH
Q 002984 518 QLRHEKHYRYVSTHDVAYWARSFA 541 (861)
Q Consensus 518 ~~r~~~~~~~v~~~~~~~W~~~fl 541 (861)
|..+.++..+++++..-.++|+
T Consensus 313 --~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 313 --RSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred --hhHHHHHHHHhcCHHHHHHHhh
Confidence 3445567778888887777664
|
|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-17 Score=181.46 Aligned_cols=264 Identities=14% Similarity=0.100 Sum_probs=180.7
Q ss_pred HHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHH
Q 002984 193 EVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (861)
Q Consensus 193 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~ 272 (861)
+..+| |+|++|+.+...+...+..+. .++....|..++....... +.......+-.+|.+-+.+......+.
T Consensus 80 ~~~~~--d~i~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~-- 151 (348)
T cd03820 80 KNNKP--DVVISFLTSLLTFLASLGLKI--VKLIVSEHNSPDAYKKRLR--RLLLRRLLYRRADAVVVLTEEDRALYY-- 151 (348)
T ss_pred cccCC--CEEEEcCchHHHHHHHHhhcc--ccEEEecCCCccchhhhhH--HHHHHHHHHhcCCEEEEeCHHHHHHhh--
Confidence 33566 999999988222222222221 4788888977654322110 111123334567888777765441110
Q ss_pred HHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHH
Q 002984 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (861)
Q Consensus 273 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 352 (861)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+
T Consensus 152 --------------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l 196 (348)
T cd03820 152 --------------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLL 196 (348)
T ss_pred --------------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHH
Confidence 0112356778999998765311 12467899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002984 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAE 432 (861)
Q Consensus 353 l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 432 (861)
++|++++.+.+|+++ |+.+|. +++...+++ ++.+ .+..+.+.+.+. .+++..+|+.||
T Consensus 197 ~~~~~~l~~~~~~~~----l~i~G~-----~~~~~~~~~----~~~~-------~~~~~~v~~~g~--~~~~~~~~~~ad 254 (348)
T cd03820 197 IEAWAKIAKKHPDWK----LRIVGD-----GPEREALEA----LIKE-------LGLEDRVILLGF--TKNIEEYYAKAS 254 (348)
T ss_pred HHHHHHHHhcCCCeE----EEEEeC-----CCCHHHHHH----HHHH-------cCCCCeEEEcCC--cchHHHHHHhCC
Confidence 999999988888765 777773 233333333 2222 233456667765 789999999999
Q ss_pred cceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-C---CceEeCCCCHHHHHHHHHH
Q 002984 433 CCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S---GAIRVNPWDIDAVADAMTL 508 (861)
Q Consensus 433 v~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~---~ai~vnP~d~~~~A~ai~~ 508 (861)
++++||..||||++++|||+| |.|+|+|...|..+.+ . .|+++++.|+++++++|.+
T Consensus 255 ~~i~ps~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 315 (348)
T cd03820 255 IFVLTSRFEGFPMVLLEAMAF-------------------GLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLR 315 (348)
T ss_pred EEEeCccccccCHHHHHHHHc-------------------CCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHH
Confidence 999999999999999999999 4568889876655544 2 5799999999999999999
Q ss_pred HhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHH
Q 002984 509 AINMRDSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (861)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl 541 (861)
+++.+ +.++...++....+..+++..++++|.
T Consensus 316 ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 316 LMEDE-ELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHcCH-HHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 99844 444444555577778888888887764
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.9e-17 Score=186.44 Aligned_cols=280 Identities=15% Similarity=0.080 Sum_probs=188.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCC---ChHHHhcC-CchHHHHHHhhcC
Q 002984 180 YVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFP---SSEIYRTL-PVRDEILRGLLNC 255 (861)
Q Consensus 180 Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP---~~e~f~~l-p~r~~il~~ll~~ 255 (861)
..+.-+.|-+++.. .. ..|+|.+|-.+.... .+.......+...++|...- .......+ ...+.++..+-.+
T Consensus 83 ~~~l~~~~l~~l~~-~~-~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (372)
T cd04949 83 EEELFAFFLDELNK-DT-KPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKV 158 (372)
T ss_pred HHHHHHHHHHHHhc-CC-CCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhC
Confidence 33444445555443 22 348999987776655 23333445677788885421 11110001 1224555666678
Q ss_pred CEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCe
Q 002984 256 DLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKK 335 (861)
Q Consensus 256 dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 335 (861)
|.|.+.+..-.+.+.... + ....+.++|+|++...+.... .....+.
T Consensus 159 d~ii~~s~~~~~~l~~~~----~----------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~ 205 (372)
T cd04949 159 DGVIVATEQQKQDLQKQF----G----------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPH 205 (372)
T ss_pred CEEEEccHHHHHHHHHHh----C----------------CCCceEEEcccccChhhcccc-------------hhhcCCC
Confidence 988888876666554311 1 011267899999987764210 0113567
Q ss_pred EEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEE
Q 002984 336 LILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLI 415 (861)
Q Consensus 336 vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~ 415 (861)
.++++||+.+.||+..+|+|+.++.+++|+++ |+.+|.. ++...++..+ .+ .+....+.+
T Consensus 206 ~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~~~~~----~~-------~~~~~~v~~ 265 (372)
T cd04949 206 KIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYG-----DEEEKLKELI----EE-------LGLEDYVFL 265 (372)
T ss_pred eEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeC-----chHHHHHHHH----HH-------cCCcceEEE
Confidence 89999999999999999999999999999876 8877743 2323333332 22 223345667
Q ss_pred cCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCC-CCcccC---CCc
Q 002984 416 DRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFI-GCSPSL---SGA 491 (861)
Q Consensus 416 ~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l---~~a 491 (861)
.| ..+++.++|+.||++|+||..||||++.+|||+| |.|+|+++.. |..+.+ ..|
T Consensus 266 ~g--~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~-------------------G~PvI~~~~~~g~~~~v~~~~~G 324 (372)
T cd04949 266 KG--YTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSH-------------------GLPVISYDVNYGPSEIIEDGENG 324 (372)
T ss_pred cC--CCCCHHHHHhhhhEEEecccccccChHHHHHHhC-------------------CCCEEEecCCCCcHHHcccCCCc
Confidence 66 3568999999999999999999999999999999 4568888876 666666 248
Q ss_pred eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHH
Q 002984 492 IRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (861)
Q Consensus 492 i~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (861)
++++|.|++++|++|..+++.+ +.+....++.++...+++...+++
T Consensus 325 ~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~ 370 (372)
T cd04949 325 YLVPKGDIEALAEAIIELLNDP-KLLQKFSEAAYENAERYSEENVWE 370 (372)
T ss_pred eEeCCCcHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhhHHHHHh
Confidence 9999999999999999999854 445555666666666666666554
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.1e-17 Score=179.69 Aligned_cols=262 Identities=17% Similarity=0.180 Sum_probs=179.1
Q ss_pred HHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHH
Q 002984 189 DKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARH 268 (861)
Q Consensus 189 ~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~ 268 (861)
.++++..+| |+|++|.+..+.++.+...+...+++.+.+|-.++... ....+.. ..|.+-..+....+.
T Consensus 89 ~~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~------~~~~~~~---~~d~ii~~s~~~~~~ 157 (359)
T cd03823 89 ARLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICP------RQGLFKK---GGDAVIAPSRFLLDR 157 (359)
T ss_pred HHHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecc------hhhhhcc---CCCEEEEeCHHHHHH
Confidence 344555676 89999988655444433333446899999997654321 1111111 127777777655555
Q ss_pred HHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccC
Q 002984 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKG 348 (861)
Q Consensus 269 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KG 348 (861)
|.. .+ ....++.++|+|+|...+..... ....++.+++++||+.+.||
T Consensus 158 ~~~-----~~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~ 205 (359)
T cd03823 158 YVA-----NG---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKG 205 (359)
T ss_pred HHH-----cC---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccC
Confidence 543 01 01236788999999987642110 11246788999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002984 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (861)
Q Consensus 349 i~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 428 (861)
+..+++|+..+.+ ++++ |+.+|... .....+... +..+.+.+.+.++.+++..+|
T Consensus 206 ~~~li~~~~~l~~--~~~~----l~i~G~~~-----~~~~~~~~~--------------~~~~~v~~~g~~~~~~~~~~~ 260 (359)
T cd03823 206 VDLLLEAFKRLPR--GDIE----LVIVGNGL-----ELEEESYEL--------------EGDPRVEFLGAYPQEEIDDFY 260 (359)
T ss_pred HHHHHHHHHHHHh--cCcE----EEEEcCch-----hhhHHHHhh--------------cCCCeEEEeCCCCHHHHHHHH
Confidence 9999999998876 5544 88887432 211111111 122456788899999999999
Q ss_pred Hhcccceeccc-ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHH
Q 002984 429 AVAECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVAD 504 (861)
Q Consensus 429 ~~ADv~vvtS~-~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ 504 (861)
+.||++++||. .||++++++|||+| +.|+|+|+.+|..+.+. .|++++|.|++++++
T Consensus 261 ~~ad~~i~ps~~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~ 321 (359)
T cd03823 261 AEIDVLVVPSIWPENFPLVIREALAA-------------------GVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAA 321 (359)
T ss_pred HhCCEEEEcCcccCCCChHHHHHHHC-------------------CCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHH
Confidence 99999999997 79999999999999 45699999988888773 489999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHH
Q 002984 505 AMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (861)
Q Consensus 505 ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl 541 (861)
+|.++++ .++.++...+..++.+.. ..++++++
T Consensus 322 ~i~~l~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~ 354 (359)
T cd03823 322 ALERLID-DPDLLERLRAGIEPPRSI---EDQAEEYL 354 (359)
T ss_pred HHHHHHh-ChHHHHHHHHhHHHhhhH---HHHHHHHH
Confidence 9999998 444455555555554433 44444443
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.9e-17 Score=174.53 Aligned_cols=191 Identities=12% Similarity=0.042 Sum_probs=129.7
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCcce
Q 002984 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE 669 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~~~ 669 (861)
+|+||+||||||++ ++..+++.++++|++| ++.|+.|+++|||+...+..+.+.+. ..++|++||+.|..+....
T Consensus 1 ~KLIftDLDGTLLd---~~~~~~~~a~~aL~~L-k~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~~~ 76 (302)
T PRK12702 1 MRLVLSSLDGSLLD---LEFNSYGAARQALAAL-ERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEHYF 76 (302)
T ss_pred CcEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccccc
Confidence 48999999999999 6777889999999999 79999999999999999999987765 3369999999999764411
Q ss_pred ---------------EEecCCccChHHHHHHHHHHHHHhhcCCC--------------ceE------eeccceeEeeecc
Q 002984 670 ---------------WETNHLGADLEWKKIVEPVMRSYTEATDG--------------SNI------EIKESALVWHHQD 714 (861)
Q Consensus 670 ---------------~~~~~~~~~~~w~~~v~~i~~~y~~~~~g--------------s~i------e~k~~~l~~~~~~ 714 (861)
|.......-..|+.....+-..+.....| .-. ..++++-.+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w~~ 156 (302)
T PRK12702 77 PAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSYSG 156 (302)
T ss_pred cccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEecC
Confidence 00000001123444444443332211111 000 1122222222222
Q ss_pred CCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEec------------------C---CCCHHHHHHHHHHHhhcCC
Q 002984 715 ADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKP------------------Q---GVSKGLVAEKVLVRMFNGG 773 (861)
Q Consensus 715 ~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p------------------~---gvsKg~al~~ll~~l~~~g 773 (861)
.+ ..+ .+.+...++.+..|..++.+.. . +++||.|+++|.+.+....
T Consensus 157 ~~--------~~~----~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~ 224 (302)
T PRK12702 157 DP--------ARL----REAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHL 224 (302)
T ss_pred CH--------HHH----HHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhcc
Confidence 11 112 4455566777888888888876 5 8999999999999984332
Q ss_pred CCCCeEEEEeCCcchHHHHHHcccc
Q 002984 774 RPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 774 i~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
..=.++++|||.||++||+++...
T Consensus 225 -~~~~tiaLGDspND~~mLe~~D~~ 248 (302)
T PRK12702 225 -GPIKALGIGCSPPDLAFLRWSEQK 248 (302)
T ss_pred -CCceEEEecCChhhHHHHHhCCee
Confidence 234899999999999999999874
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.9e-17 Score=184.61 Aligned_cols=240 Identities=13% Similarity=0.112 Sum_probs=165.4
Q ss_pred HHHHHcCCCCCEEEEeCcccccHHHHHHhhc-CCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHH
Q 002984 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRF-NRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARH 268 (861)
Q Consensus 190 ~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~-~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~ 268 (861)
++++..+| |+||+|++....+..++++.. ...++..+.|..++....+. ...+..+|.+-..+..-.+.
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 45566677 899999987776666666543 23556667776554432221 11235688887777654444
Q ss_pred HHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcc--cc
Q 002984 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMD--IF 346 (861)
Q Consensus 269 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld--~~ 346 (861)
+.. .|+. ..++.++|+|||.+.+... .+ ....+++++++||+. ..
T Consensus 148 ~~~-----~~~~---------------~~ki~vi~N~id~~~~~~~--~~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGIS---------------AQRISVIYNPVEIKTIIIP--PP-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCCC---------------HHHEEEEcCCCCHHHccCC--Cc-----------ccCCCcEEEEEEEEecccC
Confidence 432 1211 1245678999997654311 00 013467899999996 45
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCC--CHHHH
Q 002984 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV--PRFEK 424 (861)
Q Consensus 347 KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v--~~~el 424 (861)
||+..+++|+.++. + ++.|+.+|. |++.+++++.+ ++. +....+.|.|.+ +.+++
T Consensus 195 k~~~~l~~a~~~~~---~----~~~l~ivG~-----g~~~~~l~~~~----~~~-------~l~~~v~f~G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQTT---G----EWQLHIIGD-----GSDFEKCKAYS----REL-------GIEQRIIWHGWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhhC---C----CeEEEEEeC-----CccHHHHHHHH----HHc-------CCCCeEEEecccCCcHHHH
Confidence 99999999998762 2 356888883 44444444433 332 233456677755 55899
Q ss_pred HHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEecc-CCCCcccCC---CceEeCCCCHH
Q 002984 425 SAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE-FIGCSPSLS---GAIRVNPWDID 500 (861)
Q Consensus 425 ~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~---~ai~vnP~d~~ 500 (861)
..+|+.||++|+||..||||++++||||| +.|+|+|+ .+|+.+.+. .|++|+|.|++
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~-------------------G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~ 312 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSY-------------------GIPCISSDCMSGPRDIIKPGLNGELYTPGNID 312 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHc-------------------CCCEEEeCCCCChHHHccCCCceEEECCCCHH
Confidence 99999999999999999999999999999 45699999 888877773 38999999999
Q ss_pred HHHHHHHHHhcCCH
Q 002984 501 AVADAMTLAINMRD 514 (861)
Q Consensus 501 ~~A~ai~~aL~m~~ 514 (861)
++|++|.+.++.++
T Consensus 313 ~la~~i~~l~~~~~ 326 (359)
T PRK09922 313 EFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999998664
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.75 E-value=3e-17 Score=186.88 Aligned_cols=268 Identities=13% Similarity=0.077 Sum_probs=168.1
Q ss_pred HHHHcCCCCCEEEEeCcccccH---HHHHHhhcCCCeEEEEEecCCCChHHHhcCC--chHHHHHHhhcCCEEeecChHh
Q 002984 191 VMEVINPDDDCVWVHDYHLMVL---PTFLRKRFNRIKLGFFLHSPFPSSEIYRTLP--VRDEILRGLLNCDLIGFHTFDY 265 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~ll---p~~lr~~~~~~~i~~flH~PfP~~e~f~~lp--~r~~il~~ll~~dligF~t~~~ 265 (861)
+++..+| |+|++|+.-.+.. ...+++++ .. +..+.|+.|+. +++... ....++...+ ..+
T Consensus 111 ~l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~~--Y~~~~~~g~~~~~l~~~~---------~~~ 175 (462)
T PLN02846 111 TIPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYLE--YVKREKNGRVKAFLLKYI---------NSW 175 (462)
T ss_pred HHHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChHH--HHHHhccchHHHHHHHHH---------HHH
Confidence 3455677 9999999877766 34455555 34 77799998753 322111 1112222111 112
Q ss_pred HHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc--CC--CeEEEeec
Q 002984 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DG--KKLILGID 341 (861)
Q Consensus 266 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~--~~vil~Vd 341 (861)
++.| .|+.++.++... .+ +... +...+.|||.+.|..... . +++.+ .+ .+++++||
T Consensus 176 ~~r~--~~d~vi~pS~~~-~~-----l~~~---~i~~v~GVd~~~f~~~~~-----~----~~~~~~~~~~~~~~~l~vG 235 (462)
T PLN02846 176 VVDI--YCHKVIRLSAAT-QD-----YPRS---IICNVHGVNPKFLEIGKL-----K----LEQQKNGEQAFTKGAYYIG 235 (462)
T ss_pred HHHH--hcCEEEccCHHH-HH-----HhhC---EEecCceechhhcCCCcc-----c----HhhhcCCCCCcceEEEEEe
Confidence 2222 144444333211 10 0011 222357999987753211 1 11222 22 35799999
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCH
Q 002984 342 DMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPR 421 (861)
Q Consensus 342 rld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~ 421 (861)
||.+.||+..+|+||.++.+..|+++ |+++| +|++.+++++.+.+ . +.. ++++.|..+.
T Consensus 236 RL~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~~~a~~----l-------~l~-~~vf~G~~~~ 294 (462)
T PLN02846 236 KMVWSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVKAAAEK----L-------ELD-VRVYPGRDHA 294 (462)
T ss_pred cCcccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHHHHHHh----c-------CCc-EEEECCCCCH
Confidence 99999999999999999988888765 88887 67776666665543 2 222 3346665444
Q ss_pred HHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC---CCceEeCCCC
Q 002984 422 FEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL---SGAIRVNPWD 498 (861)
Q Consensus 422 ~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~ai~vnP~d 498 (861)
+ ++|+.+||||+||.+||||+|.+||||| |.|+|+++..| .+.+ .+++.+ .|
T Consensus 295 ~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~-------------------G~PVVa~~~~~-~~~v~~~~ng~~~--~~ 349 (462)
T PLN02846 295 D---PLFHDYKVFLNPSTTDVVCTTTAEALAM-------------------GKIVVCANHPS-NEFFKQFPNCRTY--DD 349 (462)
T ss_pred H---HHHHhCCEEEECCCcccchHHHHHHHHc-------------------CCcEEEecCCC-cceeecCCceEec--CC
Confidence 3 6899999999999999999999999999 45588887776 4555 235555 48
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHH
Q 002984 499 IDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 499 ~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 545 (861)
.++++++|.++|+.++++...+ .+ ..+++..-+++|++.++
T Consensus 350 ~~~~a~ai~~~l~~~~~~~~~~---a~---~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 350 GKGFVRATLKALAEEPAPLTDA---QR---HELSWEAATERFLRVAD 390 (462)
T ss_pred HHHHHHHHHHHHccCchhHHHH---HH---HhCCHHHHHHHHHHHhc
Confidence 9999999999998544332211 11 26777777777776554
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-16 Score=175.37 Aligned_cols=278 Identities=17% Similarity=0.126 Sum_probs=189.2
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCC-chHHH-HHHhhcCCEEeecChHhHHH
Q 002984 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLP-VRDEI-LRGLLNCDLIGFHTFDYARH 268 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp-~r~~i-l~~ll~~dligF~t~~~~~~ 268 (861)
+++..+| |+|++|..+..++..++.+.....++.+.+|...+......... ....+ ...+-.+|.+-+.+....+.
T Consensus 75 ~~~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 152 (359)
T cd03808 75 LLRKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDL 152 (359)
T ss_pred HHHhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHH
Confidence 3445577 89999988877777777665666778888886532211000000 00111 11223578888888877776
Q ss_pred HHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccC
Q 002984 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKG 348 (861)
Q Consensus 269 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KG 348 (861)
+.+. +.. .....+.+.|+|+|...+..... . ...++.+++++||+.+.||
T Consensus 153 ~~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~i~~~G~~~~~k~ 202 (359)
T cd03808 153 ALKL-----GII-------------KKKKTVLIPGSGVDLDRFSPSPE-----P-------IPEDDPVFLFVARLLKDKG 202 (359)
T ss_pred HHHh-----cCC-------------CcCceEEecCCCCChhhcCcccc-----c-------cCCCCcEEEEEeccccccC
Confidence 6541 100 01234567799999877642111 0 1256789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002984 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (861)
Q Consensus 349 i~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 428 (861)
+...++|++.+.+++|+++ |+.+|.... . ...... ++.+ .+..+.+.+.+. .+++..+|
T Consensus 203 ~~~li~~~~~l~~~~~~~~----l~i~G~~~~---~--~~~~~~---~~~~-------~~~~~~v~~~g~--~~~~~~~~ 261 (359)
T cd03808 203 IDELLEAARILKAKGPNVR----LLLVGDGDE---E--NPAAIL---EIEK-------LGLEGRVEFLGF--RDDVPELL 261 (359)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEcCCCc---c--hhhHHH---HHHh-------cCCcceEEEeec--cccHHHHH
Confidence 9999999999988788765 887875431 1 111111 1111 122244555555 67899999
Q ss_pred HhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHH
Q 002984 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (861)
Q Consensus 429 ~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~a 505 (861)
+.||++++||.+||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|+++++++
T Consensus 262 ~~adi~i~ps~~e~~~~~~~Ea~~~-------------------G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~ 322 (359)
T cd03808 262 AAADVFVLPSYREGLPRVLLEAMAM-------------------GRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADA 322 (359)
T ss_pred HhccEEEecCcccCcchHHHHHHHc-------------------CCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHH
Confidence 9999999999999999999999999 45689999999988873 3799999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHhhhh-hccCCHhHHHHHHH
Q 002984 506 MTLAINMRDSEKQLRHEKHYRY-VSTHDVAYWARSFA 541 (861)
Q Consensus 506 i~~aL~m~~~e~~~r~~~~~~~-v~~~~~~~W~~~fl 541 (861)
|.+++.. ++.+....++.+++ ...++...+++.++
T Consensus 323 i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 323 IERLIED-PELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9998864 44455555566666 56688888887764
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.9e-17 Score=175.72 Aligned_cols=194 Identities=22% Similarity=0.335 Sum_probs=122.0
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc---CCceEecCcEEEEeCCc
Q 002984 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE---MLGIAAEHGYFIRWNKT 667 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~---~lgliaenG~~i~~~~~ 667 (861)
.++|++|+||||++ .+.....+..+.++. ....++.++++|||+...+.+.+...+ ...+|+.+|..|+...
T Consensus 2 ~~ll~sDlD~Tl~~---~~~~~~~~l~~~l~~-~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~- 76 (247)
T PF05116_consen 2 PRLLASDLDGTLID---GDDEALARLEELLEQ-QARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGE- 76 (247)
T ss_dssp SEEEEEETBTTTBH---CHHHHHHHHHHHHHH-HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESS-
T ss_pred CEEEEEECCCCCcC---CCHHHHHHHHHHHHH-hhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcC-
Confidence 57999999999993 222233455555552 258999999999999999999887532 2348899999888832
Q ss_pred ceEEecCCccChHHHHHHHH-----HHHHHhhcCCCceE----eeccceeEeeeccCCccchhccHHHHHHHHHHHhcCC
Q 002984 668 SEWETNHLGADLEWKKIVEP-----VMRSYTEATDGSNI----EIKESALVWHHQDADPDFGSCQAKELLDHLESVLANE 738 (861)
Q Consensus 668 ~~~~~~~~~~~~~w~~~v~~-----i~~~y~~~~~gs~i----e~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~ 738 (861)
.|. .+..|.+.+.. .++......++... +...+.+.+.+...+. ...++.|++.+...
T Consensus 77 -~~~-----~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~-------~~~~~~i~~~l~~~ 143 (247)
T PF05116_consen 77 -NWQ-----PDEEWQAHIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDS-------ADILEEIRARLRQR 143 (247)
T ss_dssp -TTE-----E-HHHHHHHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSH-------CHHHHHHHHHHHCC
T ss_pred -CCc-----ChHHHHHHHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccc-------hhHHHHHHHHHHHc
Confidence 111 12234332221 11122222233221 2223344444443221 13455566655554
Q ss_pred CE---EEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEe
Q 002984 739 PA---VVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTV 815 (861)
Q Consensus 739 ~~---~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v 815 (861)
.. .+.++...++|.|+++|||.|+++|++++ ++++++++++|||.||++||.... .+|.|
T Consensus 144 ~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~---~~~~~~vl~aGDSgND~~mL~~~~--------------~~vvV 206 (247)
T PF05116_consen 144 GLRVNVIYSNGRDLDILPKGASKGAALRYLMERW---GIPPEQVLVAGDSGNDLEMLEGGD--------------HGVVV 206 (247)
T ss_dssp TCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHH---T--GGGEEEEESSGGGHHHHCCSS--------------EEEE-
T ss_pred CCCeeEEEccceeEEEccCCCCHHHHHHHHHHHh---CCCHHHEEEEeCCCCcHHHHcCcC--------------CEEEE
Confidence 42 34567889999999999999999999999 999999999999999999995554 48999
Q ss_pred CCCC
Q 002984 816 GRKP 819 (861)
Q Consensus 816 G~~~ 819 (861)
||+.
T Consensus 207 ~Na~ 210 (247)
T PF05116_consen 207 GNAQ 210 (247)
T ss_dssp TTS-
T ss_pred cCCC
Confidence 9874
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.2e-16 Score=179.61 Aligned_cols=271 Identities=10% Similarity=0.028 Sum_probs=171.4
Q ss_pred CEEEEeCcccc--cHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCch-------HHHHHHh-hcCCEEeecChHhHHHH
Q 002984 200 DCVWVHDYHLM--VLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVR-------DEILRGL-LNCDLIGFHTFDYARHF 269 (861)
Q Consensus 200 D~VwvhDyhl~--llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r-------~~il~~l-l~~dligF~t~~~~~~F 269 (861)
|+|.+|..... .+...+-.+..+.|+.+.+|--+++..-.. .+.. ..+-+.+ -.||.|-..+....+.+
T Consensus 97 Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~-~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~l 175 (415)
T cd03816 97 DYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALK-LGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKEDL 175 (415)
T ss_pred CEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcc-cCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHHHHH
Confidence 99999985532 333444344457899999996443211000 1100 0111111 23676665555433332
Q ss_pred HHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHH---------------H--cC
Q 002984 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEK---------------Q--FD 332 (861)
Q Consensus 270 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~---------------~--~~ 332 (861)
.. .+ ....+|.++|+| +...|.+.. .. .....+.+ . -+
T Consensus 176 ~~-----~~---------------~~~~ki~vI~Ng-~~~~f~p~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (415)
T cd03816 176 QQ-----FN---------------NWKIRATVLYDR-PPEQFRPLP---LE-EKHELFLKLAKTFLTRELRIGAVQLSEE 230 (415)
T ss_pred Hh-----hh---------------ccCCCeeecCCC-CHHHceeCc---HH-HHHHHHHhccccccccccccccceecCC
Confidence 21 11 122456778998 445554221 11 11111111 0 13
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHh------CCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCC
Q 002984 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQ------HPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGS 406 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~Af~~ll~~------~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~ 406 (861)
+..++++++|+.+.||+..+++|+..+.+. +|+ +.|+++| +|+..+++++.++ +
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~~~~~----~------- 290 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPK----LLCIITG-----KGPLKEKYLERIK----E------- 290 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCC----EEEEEEe-----cCccHHHHHHHHH----H-------
Confidence 356888999999999999999999998764 344 4588888 3444445554444 2
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhcccceec---ccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCC
Q 002984 407 PNYEPVVLIDRPVPRFEKSAYYAVAECCIVN---AVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG 483 (861)
Q Consensus 407 ~~~~pvv~~~~~v~~~el~aly~~ADv~vvt---S~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 483 (861)
.+...++++.+.++.+++..+|+.||++|++ +..+||+++++||||| |.|+|+|...|
T Consensus 291 ~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~-------------------G~PVI~s~~~~ 351 (415)
T cd03816 291 LKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGC-------------------GLPVCALDFKC 351 (415)
T ss_pred cCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHc-------------------CCCEEEeCCCC
Confidence 3345688888889999999999999999864 3358899999999999 45689999988
Q ss_pred CcccCC---CceEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHHHhhhhhccCCHhHHHHHHH
Q 002984 484 CSPSLS---GAIRVNPWDIDAVADAMTLAINMR--DSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (861)
Q Consensus 484 ~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~--~~e~~~r~~~~~~~v~~~~~~~W~~~fl 541 (861)
+.+.+. +|++|+ |++++|++|.++++.+ +++++.+.++.+++.. .+|...+.
T Consensus 352 ~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~ 408 (415)
T cd03816 352 IDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWD 408 (415)
T ss_pred HHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHH
Confidence 888773 478884 9999999999999962 5666666666665553 44555443
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.1e-17 Score=185.51 Aligned_cols=316 Identities=12% Similarity=0.096 Sum_probs=185.0
Q ss_pred EeCChHHHHHHHhhcccccc--ccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccH
Q 002984 135 TFLPHDLQKKFYLGFCKQHL--WPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVL 212 (861)
Q Consensus 135 v~l~~~~~~~~y~gf~~~~l--wpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~ll 212 (861)
+|=++++++.|......+-. -|.|-.. ++| ++|....-.. .-+-... +.+...+| |+|++|..-.+.+
T Consensus 379 ~F~~p~eQe~~ir~wl~~r~g~~~~~~i~--fYp---g~~~~~~~SI-~p~gdI~--~~L~~f~P--DVVHLatP~~LGw 448 (794)
T PLN02501 379 TFSSPEEQESYIRNWLEERIGFKADFKIS--FYP---GKFSKERRSI-IPAGDTS--QFIPSKDA--DIAILEEPEHLNW 448 (794)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCceEE--eec---chhccCCccc-cchHHHH--HHhhccCC--CEEEECCchhhcc
Confidence 77788888888777663211 1222211 223 3443221111 1111111 12334466 9999998765554
Q ss_pred H---HHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHH--HHHHhCCccccCCCe
Q 002984 213 P---TFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC--CSRMLGLDYESKRGH 287 (861)
Q Consensus 213 p---~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~--~~r~lg~~~~~~~~~ 287 (861)
. ....+++. ++....|+.||.+=-+.-+..-+.++. .++++|+.. |++++.++.....
T Consensus 449 ~~~Glr~ArKl~--PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~v~r~hcD~VIaPS~atq~-- 511 (794)
T PLN02501 449 YHHGKRWTDKFN--HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNWVTRAYCHKVLRLSAATQD-- 511 (794)
T ss_pred HHHHHHHHHHcC--CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHHHHHhhCCEEEcCCHHHHH--
Confidence 4 23333443 699999999985322222222112111 133344443 6666655422111
Q ss_pred eeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccccCHHHHHHHHHHHHHhCC
Q 002984 288 IGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHP 364 (861)
Q Consensus 288 ~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P 364 (861)
+ . +. .|.. ..|||++.|.+... . ... .++ ...+.+++||||.+.||+..+|+|+..+.++.|
T Consensus 512 --L--~-~~-vI~n-VnGVDte~F~P~~r---~----~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~p 576 (794)
T PLN02501 512 --L--P-KS-VICN-VHGVNPKFLKIGEK---V----AEE-RELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELD 576 (794)
T ss_pred --h--c-cc-ceee-cccccccccCCcch---h----HHH-HhcCCccccCceEEEEcccccCCHHHHHHHHHHHHhhCC
Confidence 1 1 11 1111 15999998863211 1 111 122 122458999999999999999999999988888
Q ss_pred CCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCC
Q 002984 365 GMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMN 444 (861)
Q Consensus 365 ~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~n 444 (861)
+++ |+++| +|++.+++++.+.+ .+ . .+ .|.+.. ++...+|+.+||||+||.+||||
T Consensus 577 nvr----LvIVG-----DGP~reeLe~la~e----Lg-------L-~V-~FLG~~--dd~~~lyasaDVFVlPS~sEgFG 632 (794)
T PLN02501 577 GFN----LDVFG-----NGEDAHEVQRAAKR----LD-------L-NL-NFLKGR--DHADDSLHGYKVFINPSISDVLC 632 (794)
T ss_pred CeE----EEEEc-----CCccHHHHHHHHHH----cC-------C-EE-EecCCC--CCHHHHHHhCCEEEECCCcccch
Confidence 765 88887 56665555554443 21 1 23 344443 34458999999999999999999
Q ss_pred CcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-C--CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 002984 445 LVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDIDAVADAMTLAINMRDSEKQLRH 521 (861)
Q Consensus 445 Lv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~ 521 (861)
+|++||||| |.|+|++...|.. .+ . ++++ +.|.++++++|.++|..++. + ...
T Consensus 633 lVlLEAMA~-------------------GlPVVATd~pG~e-~V~~g~nGll--~~D~EafAeAI~~LLsd~~~-r-l~~ 688 (794)
T PLN02501 633 TATAEALAM-------------------GKFVVCADHPSNE-FFRSFPNCLT--YKTSEDFVAKVKEALANEPQ-P-LTP 688 (794)
T ss_pred HHHHHHHHc-------------------CCCEEEecCCCCc-eEeecCCeEe--cCCHHHHHHHHHHHHhCchh-h-hHH
Confidence 999999999 4568888887743 34 2 3333 47999999999999986652 2 222
Q ss_pred HHhhhhhccCCHhHHHHHHHHHH
Q 002984 522 EKHYRYVSTHDVAYWARSFAQDL 544 (861)
Q Consensus 522 ~~~~~~v~~~~~~~W~~~fl~~l 544 (861)
+. ...+++..-++++++..
T Consensus 689 ~a----~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 689 EQ----RYNLSWEAATQRFMEYS 707 (794)
T ss_pred HH----HhhCCHHHHHHHHHHhh
Confidence 21 22567776677666543
|
|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.5e-16 Score=173.12 Aligned_cols=263 Identities=17% Similarity=0.145 Sum_probs=175.4
Q ss_pred HcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHH
Q 002984 194 VINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCC 273 (861)
Q Consensus 194 ~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~ 273 (861)
..+| |+|++|+...+.....+... .+.+..+++|...-....+..+ .+.-.-..+..||.|-..+..+.+.+..
T Consensus 81 ~~~~--Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~-~~~~~~~~~~~~d~vi~~s~~~~~~~~~-- 154 (357)
T cd03795 81 AKKA--DVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLLKL-YRPLQRRFLRRADAIVATSPNYAETSPV-- 154 (357)
T ss_pred CCCC--CEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhhhh-hhHHHHHHHHhcCEEEeCcHHHHHHHHH--
Confidence 3355 89999986654332222222 4678888999643222111000 1111222456688888777766654432
Q ss_pred HHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHH
Q 002984 274 SRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKL 353 (861)
Q Consensus 274 ~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l 353 (861)
. + ....++.++|+|+|...+.... .. .........++++|+++||+.+.||+..++
T Consensus 155 --~-~---------------~~~~~~~~i~~gi~~~~~~~~~-----~~-~~~~~~~~~~~~~i~~~G~~~~~K~~~~li 210 (357)
T cd03795 155 --L-R---------------RFRDKVRVIPLGLDPARYPRPD-----AL-EEAIWRRAAGRPFFLFVGRLVYYKGLDVLL 210 (357)
T ss_pred --h-c---------------CCccceEEecCCCChhhcCCcc-----hh-hhHhhcCCCCCcEEEEecccccccCHHHHH
Confidence 0 0 0113567889999988764211 10 111111225678999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccc
Q 002984 354 LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAEC 433 (861)
Q Consensus 354 ~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv 433 (861)
+|++++. ++.|+.+|. ++....+++ ++.+ .+..+-+.+.|.++.+++..+|+.||+
T Consensus 211 ~a~~~l~--------~~~l~i~G~-----g~~~~~~~~----~~~~-------~~~~~~V~~~g~v~~~~~~~~~~~ad~ 266 (357)
T cd03795 211 EAAAALP--------DAPLVIVGE-----GPLEAELEA----LAAA-------LGLLDRVRFLGRLDDEEKAALLAACDV 266 (357)
T ss_pred HHHHhcc--------CcEEEEEeC-----ChhHHHHHH----HHHh-------cCCcceEEEcCCCCHHHHHHHHHhCCE
Confidence 9998863 455888873 333333333 3222 234456788899999999999999999
Q ss_pred ceeccc--ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC----CceEeCCCCHHHHHHHHH
Q 002984 434 CIVNAV--RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS----GAIRVNPWDIDAVADAMT 507 (861)
Q Consensus 434 ~vvtS~--~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~----~ai~vnP~d~~~~A~ai~ 507 (861)
+++||. .||+|++.+|||+| +.|+|+|+..|..+.+. .|++++|.|+++++++|.
T Consensus 267 ~i~ps~~~~e~~g~~~~Ea~~~-------------------g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~ 327 (357)
T cd03795 267 FVFPSVERSEAFGIVLLEAMAF-------------------GKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIR 327 (357)
T ss_pred EEeCCcccccccchHHHHHHHc-------------------CCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHH
Confidence 999996 59999999999999 45689999888887663 378999999999999999
Q ss_pred HHhcCCHHHHHHHHHHhhhhhcc
Q 002984 508 LAINMRDSEKQLRHEKHYRYVST 530 (861)
Q Consensus 508 ~aL~m~~~e~~~r~~~~~~~v~~ 530 (861)
++++. +++++...++.++++.+
T Consensus 328 ~l~~~-~~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 328 RLLED-PELRERLGEAARERAEE 349 (357)
T ss_pred HHHHC-HHHHHHHHHHHHHHHHH
Confidence 99984 45555555566666543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-15 Score=173.78 Aligned_cols=189 Identities=16% Similarity=0.159 Sum_probs=135.6
Q ss_pred EEEEecccCCchHHHHhhCCchhHHHHHHHHHHc-CCCeEEEeecCcccccCHHHHH----HHHHHHHHhCCCCCCcEEE
Q 002984 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDIFKGISLKL----LAMEQLLQQHPGMRGKVVL 372 (861)
Q Consensus 298 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~~KGi~~~l----~Af~~ll~~~P~~~~~vvL 372 (861)
++.++|+|||.+.|......+ ..+ .++++|+++||+++.||+..++ .++..+.+++|+++ |
T Consensus 197 ~v~vipngvd~~~f~~~~~~~----------~~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l 262 (397)
T TIGR03087 197 RITAFPNGVDADFFSPDRDYP----------NPYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----F 262 (397)
T ss_pred CeEEeecccchhhcCCCcccc----------CCCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----E
Confidence 567889999998875321100 111 3567899999999999999887 56667777888876 8
Q ss_pred EEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceeccc-ccCCCCcceeee
Q 002984 373 VQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAV-RDGMNLVPYKYI 451 (861)
Q Consensus 373 vqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~-~EG~nLv~~Ea~ 451 (861)
+++|. ++. . ++.++.. .+-+.+.|.++ ++..+|+.||++|+||. .||++++++|||
T Consensus 263 ~ivG~-----g~~-~----~~~~l~~-----------~~~V~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAm 319 (397)
T TIGR03087 263 YIVGA-----KPS-P----AVRALAA-----------LPGVTVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAM 319 (397)
T ss_pred EEECC-----CCh-H----HHHHhcc-----------CCCeEEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHH
Confidence 88873 222 1 1222211 12345677776 68999999999999996 699999999999
Q ss_pred eeecCCCcccccccCCCCCCCCceEEeccCCCCccc-C-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh-
Q 002984 452 VCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS-L-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV- 528 (861)
Q Consensus 452 ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~-l-~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v- 528 (861)
|| |.|+|+|..++.... . +.++++. .|++++|++|.++++ .++.++...++.++++
T Consensus 320 a~-------------------G~PVV~t~~~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~-~~~~~~~~~~~ar~~v~ 378 (397)
T TIGR03087 320 AM-------------------AKPVVASPEAAEGIDALPGAELLVA-ADPADFAAAILALLA-NPAEREELGQAARRRVL 378 (397)
T ss_pred Hc-------------------CCCEEecCcccccccccCCcceEeC-CCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHH
Confidence 99 455888876432111 1 3478885 899999999999997 4455666677778877
Q ss_pred ccCCHhHHHHHHHHHH
Q 002984 529 STHDVAYWARSFAQDL 544 (861)
Q Consensus 529 ~~~~~~~W~~~fl~~l 544 (861)
..+++...++++.+-+
T Consensus 379 ~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 379 QHYHWPRNLARLDALL 394 (397)
T ss_pred HhCCHHHHHHHHHHHh
Confidence 4689998888876654
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.3e-16 Score=169.96 Aligned_cols=249 Identities=17% Similarity=0.128 Sum_probs=167.8
Q ss_pred HHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHH
Q 002984 193 EVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (861)
Q Consensus 193 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~ 272 (861)
+..+| |+|++|++....+...+..+. +.++.+.+|..++..... ..+........+..+|.+-+.+....+.+...
T Consensus 78 ~~~~~--dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 153 (353)
T cd03811 78 RKEKP--DVVISHLTTTPNVLALLAARL-GTKLIVWEHNSLSLELKR-KLRLLLLIRKLYRRADKIVAVSEGVKEDLLKL 153 (353)
T ss_pred HhcCC--CEEEEcCccchhHHHHHHhhc-CCceEEEEcCcchhhhcc-chhHHHHHHhhccccceEEEeccchhhhHHHh
Confidence 34466 899999882233333444444 789999999887543211 11111123444567888888777666555542
Q ss_pred HHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHH
Q 002984 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (861)
Q Consensus 273 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 352 (861)
. + ....++.++|+|+|...+..... ... ......++.+++++||+++.||+...
T Consensus 154 ~----~---------------~~~~~~~vi~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~i~~~g~~~~~k~~~~~ 207 (353)
T cd03811 154 L----G---------------IPPDKIEVIYNPIDIEEIRALAE-----EPL--ELGIPPDGPVILAVGRLSPQKGFDTL 207 (353)
T ss_pred h----c---------------CCccccEEecCCcChhhcCcccc-----hhh--hcCCCCCceEEEEEecchhhcChHHH
Confidence 1 0 01246778899999887643211 000 00112567899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002984 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAE 432 (861)
Q Consensus 353 l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 432 (861)
++|++.+.+++++++ |+.+|. ++...++++.+ .+. +..+.+.+.+.+ +++..+|+.||
T Consensus 208 i~~~~~l~~~~~~~~----l~i~G~-----~~~~~~~~~~~----~~~-------~~~~~v~~~g~~--~~~~~~~~~~d 265 (353)
T cd03811 208 IRAFALLRKEGPDAR----LVILGD-----GPLREELEALA----KEL-------GLADRVHFLGFQ--SNPYPYLKAAD 265 (353)
T ss_pred HHHHHHhhhcCCCce----EEEEcC-----CccHHHHHHHH----Hhc-------CCCccEEEeccc--CCHHHHHHhCC
Confidence 999999988777665 887773 23333333332 222 233455566654 46889999999
Q ss_pred cceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHH
Q 002984 433 CCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLA 509 (861)
Q Consensus 433 v~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~a 509 (861)
+++.||..||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|.+++++++..+
T Consensus 266 ~~i~ps~~e~~~~~~~Ea~~~-------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i 326 (353)
T cd03811 266 LFVLSSRYEGFPNVLLEAMAL-------------------GTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALAL 326 (353)
T ss_pred EEEeCcccCCCCcHHHHHHHh-------------------CCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHH
Confidence 999999999999999999999 45689999998888773 48999999999995555544
Q ss_pred hcC
Q 002984 510 INM 512 (861)
Q Consensus 510 L~m 512 (861)
..+
T Consensus 327 ~~~ 329 (353)
T cd03811 327 LDL 329 (353)
T ss_pred Hhc
Confidence 443
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.9e-16 Score=172.87 Aligned_cols=186 Identities=12% Similarity=0.088 Sum_probs=135.4
Q ss_pred EEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 002984 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVN 377 (861)
Q Consensus 298 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~ 377 (861)
++.++|+|||.+.|.+.. . ...++.++++++|+.+.||+..+|+|++++.+++|+++ |+.+|.
T Consensus 119 ~i~vIpNGVd~~~f~~~~----~---------~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~ 181 (331)
T PHA01630 119 PIYVIPHNLNPRMFEYKP----K---------EKPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSS 181 (331)
T ss_pred CEEEECCCCCHHHcCCCc----c---------ccCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeC
Confidence 567889999988774210 0 01345566777899999999999999999988887665 887772
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCC
Q 002984 378 PARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGT 457 (861)
Q Consensus 378 p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~ 457 (861)
. .. +. ++. .+ .+ +.+.++.+++..+|+.||+||+||..||||++++|||||
T Consensus 182 ~-----~~--~~--~l~----~~------~~------~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~---- 232 (331)
T PHA01630 182 N-----ML--DP--RLF----GL------NG------VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALAL---- 232 (331)
T ss_pred c-----cc--ch--hhc----cc------cc------eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHc----
Confidence 1 11 11 110 00 11 234688999999999999999999999999999999999
Q ss_pred CcccccccCCCCCCCCceEEeccCCCCcccCCC-----------------------ceEeCCCCHHHHHHHHHHHhcCC-
Q 002984 458 PIMDEALGRERDSPHTSMLVVSEFIGCSPSLSG-----------------------AIRVNPWDIDAVADAMTLAINMR- 513 (861)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~-----------------------ai~vnP~d~~~~A~ai~~aL~m~- 513 (861)
|.|+|+|..+|..+.+.+ |++++| |.++++++|.++|..+
T Consensus 233 ---------------G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~ 296 (331)
T PHA01630 233 ---------------GLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWT 296 (331)
T ss_pred ---------------CCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCC
Confidence 556999998887877632 444555 7888999999998764
Q ss_pred HHHHHHH-HHHhhhhhccCCHhHHHHHHHHHHH
Q 002984 514 DSEKQLR-HEKHYRYVSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 514 ~~e~~~r-~~~~~~~v~~~~~~~W~~~fl~~l~ 545 (861)
+++++.+ ......+..++++...++.+++-++
T Consensus 297 ~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 297 PEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 2334433 3344445677999999998887664
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.8e-16 Score=172.56 Aligned_cols=224 Identities=18% Similarity=0.172 Sum_probs=154.1
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCC----ChHHH-hcCCc-------------hHHHHHHhhcCCEEee
Q 002984 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFP----SSEIY-RTLPV-------------RDEILRGLLNCDLIGF 260 (861)
Q Consensus 199 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~e~f-~~lp~-------------r~~il~~ll~~dligF 260 (861)
-|+|+++.. .+....+ +.+..+..+++|.|.+ ..+.+ ...+. +....+.+..+|.|..
T Consensus 84 ~D~v~~~~~--~~~~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 159 (351)
T cd03804 84 YDLVISSSH--AVAKGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFIA 159 (351)
T ss_pred CCEEEEcCc--HHhcccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 388877643 2222222 4557888889998631 11111 11110 1111223456788777
Q ss_pred cChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEee
Q 002984 261 HTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGI 340 (861)
Q Consensus 261 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~V 340 (861)
.+....+.+... . +. ...++|+|+|.+.|.... ..+++++++
T Consensus 160 ~S~~~~~~~~~~----~----------------~~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~~ 201 (351)
T cd03804 160 NSRFVARRIKKY----Y----------------GR--DATVIYPPVDTDRFTPAE----------------EKEDYYLSV 201 (351)
T ss_pred CCHHHHHHHHHH----h----------------CC--CcEEECCCCCHhhcCcCC----------------CCCCEEEEE
Confidence 776655555331 1 11 124678999987764210 235679999
Q ss_pred cCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCC
Q 002984 341 DDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420 (861)
Q Consensus 341 drld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~ 420 (861)
||+.+.||+..+++|++++ | ++ |+.+|. +++.+++++ . ..+.+.+.|.++
T Consensus 202 G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-----g~~~~~l~~-------~---------~~~~V~~~g~~~ 251 (351)
T cd03804 202 GRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-----GPELDRLRA-------K---------AGPNVTFLGRVS 251 (351)
T ss_pred EcCccccChHHHHHHHHHC----C-Cc----EEEEEC-----ChhHHHHHh-------h---------cCCCEEEecCCC
Confidence 9999999999999999865 4 44 787873 344333332 0 113466788999
Q ss_pred HHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCC
Q 002984 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPW 497 (861)
Q Consensus 421 ~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~ 497 (861)
.+++.++|+.||++++||. ||||++++|||+| +.|+|+|..+|..+.+. .|++++|.
T Consensus 252 ~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~-------------------G~Pvi~~~~~~~~e~i~~~~~G~~~~~~ 311 (351)
T cd03804 252 DEELRDLYARARAFLFPAE-EDFGIVPVEAMAS-------------------GTPVIAYGKGGALETVIDGVTGILFEEQ 311 (351)
T ss_pred HHHHHHHHHhCCEEEECCc-CCCCchHHHHHHc-------------------CCCEEEeCCCCCcceeeCCCCEEEeCCC
Confidence 9999999999999999999 9999999999999 45689999988887772 48999999
Q ss_pred CHHHHHHHHHHHhcCCH
Q 002984 498 DIDAVADAMTLAINMRD 514 (861)
Q Consensus 498 d~~~~A~ai~~aL~m~~ 514 (861)
|++++|++|..+++.++
T Consensus 312 ~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 312 TVESLAAAVERFEKNED 328 (351)
T ss_pred CHHHHHHHHHHHHhCcc
Confidence 99999999999998764
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-15 Score=167.47 Aligned_cols=246 Identities=14% Similarity=0.087 Sum_probs=164.2
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHH
Q 002984 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFL 270 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl 270 (861)
+++..++ |+|++|+....++ + .+..+.++.+.+|..++.... .....+...+.+-+-+...++.+.
T Consensus 82 ~~~~~~~--Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~ 147 (335)
T cd03802 82 ALAAGDF--DIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP 147 (335)
T ss_pred HHhcCCC--CEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc
Confidence 4445566 8999999887776 2 334568899999987643211 123333344443332322221110
Q ss_pred HHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHH
Q 002984 271 SCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGIS 350 (861)
Q Consensus 271 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~ 350 (861)
. . .++.++|+|+|++.|.. ...++.+++++||+.+.||+.
T Consensus 148 --------------------~---~-~~~~vi~ngvd~~~~~~----------------~~~~~~~i~~~Gr~~~~Kg~~ 187 (335)
T cd03802 148 --------------------P---L-PWVATVHNGIDLDDYPF----------------RGPKGDYLLFLGRISPEKGPH 187 (335)
T ss_pred --------------------c---c-cccEEecCCcChhhCCC----------------CCCCCCEEEEEEeeccccCHH
Confidence 0 0 35678999999988742 013567899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 002984 351 LKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAV 430 (861)
Q Consensus 351 ~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ 430 (861)
.+++|+.+ ++++ |+++|... ....+...+.+... ..+.+.+.|.++..++..+|+.
T Consensus 188 ~li~~~~~-----~~~~----l~i~G~~~-----~~~~~~~~~~~~~~----------~~~~v~~~G~~~~~~~~~~~~~ 243 (335)
T cd03802 188 LAIRAARR-----AGIP----LKLAGPVS-----DPDYFYREIAPELL----------DGPDIEYLGEVGGAEKAELLGN 243 (335)
T ss_pred HHHHHHHh-----cCCe----EEEEeCCC-----CHHHHHHHHHHhcc----------cCCcEEEeCCCCHHHHHHHHHh
Confidence 99998754 3444 88787432 21222222221100 1245678889999999999999
Q ss_pred cccceeccc-ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHH
Q 002984 431 AECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAM 506 (861)
Q Consensus 431 ADv~vvtS~-~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai 506 (861)
||++|+||. .||||++++|||+| |.|+|+|+.+|..+.+. .++++++ +++++++|
T Consensus 244 ~d~~v~ps~~~E~~~~~~lEAma~-------------------G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l 302 (335)
T cd03802 244 ARALLFPILWEEPFGLVMIEAMAC-------------------GTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAV 302 (335)
T ss_pred CcEEEeCCcccCCcchHHHHHHhc-------------------CCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHH
Confidence 999999997 59999999999999 55699999999888773 4788887 99999999
Q ss_pred HHHhcCCHHHHHHHHHHhhhh-hccCCHhHHHHHHHH
Q 002984 507 TLAINMRDSEKQLRHEKHYRY-VSTHDVAYWARSFAQ 542 (861)
Q Consensus 507 ~~aL~m~~~e~~~r~~~~~~~-v~~~~~~~W~~~fl~ 542 (861)
.+++..+.+. .++. ...+++..-++++++
T Consensus 303 ~~l~~~~~~~-------~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 303 ARADRLDRAA-------CRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred HHHhccHHHH-------HHHHHHHhCCHHHHHHHHHH
Confidence 9987654321 1112 244666666666554
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.9e-15 Score=168.71 Aligned_cols=266 Identities=14% Similarity=0.018 Sum_probs=170.7
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHH-----HHhhcCCEEeecChHhHHHHHHHHH
Q 002984 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEIL-----RGLLNCDLIGFHTFDYARHFLSCCS 274 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il-----~~ll~~dligF~t~~~~~~Fl~~~~ 274 (861)
|+++||.......+.....+..+.++.+.+|..-.....+.. ....++ ..+..+|.|-..+....+.+..
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~--- 160 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRLKGKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKE--- 160 (363)
T ss_pred CeEEEEecCccHHHHHHHHHhcCCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH---
Confidence 566666555443333222222367888888852111111100 001111 1344678887777644443322
Q ss_pred HHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHH--cCCCeEEEeecCcccccCHHHH
Q 002984 275 RMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQ--FDGKKLILGIDDMDIFKGISLK 352 (861)
Q Consensus 275 r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~--~~~~~vil~Vdrld~~KGi~~~ 352 (861)
.. |... .++|+|+|...+.. ....++. +..++.++++||+.+.||+..+
T Consensus 161 -~~----------------~~~~--~~i~ngv~~~~~~~----------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 161 -KY----------------GRDS--TYIPYGADHVVSSE----------EDEILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred -hc----------------CCCC--eeeCCCcChhhcch----------hhhhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 11 1111 67899999876532 0111222 2345678899999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002984 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAE 432 (861)
Q Consensus 353 l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 432 (861)
++|+.++.. ++.|+.+|... ...++.+++.+ ++ +..+.+.+.|.++.+++..+|+.||
T Consensus 212 i~a~~~l~~-------~~~l~ivG~~~-----~~~~~~~~~~~-------~~---~~~~~V~~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS-------GKKLVIVGNAD-----HNTPYGKLLKE-------KA---AADPRIIFVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc-------CceEEEEcCCC-----CcchHHHHHHH-------Hh---CCCCcEEEccccChHHHHHHHHhCC
Confidence 999987632 34588888532 11233333332 11 1234567888999999999999999
Q ss_pred cceecccc-cCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-CCceEeCCCCHHHHHHHHHHHh
Q 002984 433 CCIVNAVR-DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAI 510 (861)
Q Consensus 433 v~vvtS~~-EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~aL 510 (861)
++++||.. ||||++++|||+| +.|+|+|..+|..+.+ .++++++|.|. +|++|.+++
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~-------------------G~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~ 328 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAY-------------------GCPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELE 328 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHc-------------------CCCEEEecCCccceeecCCeeEecCchH--HHHHHHHHH
Confidence 99999999 9999999999999 5569999988887777 45788888776 999999999
Q ss_pred cCCHHHHHHHHHHhhhhhc-cCCHhHHHHHHHHH
Q 002984 511 NMRDSEKQLRHEKHYRYVS-THDVAYWARSFAQD 543 (861)
Q Consensus 511 ~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~fl~~ 543 (861)
+.++ .+....++.++.+. .+++..-++++++.
T Consensus 329 ~~~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~ 361 (363)
T cd04955 329 ADPE-EVSAMAKAARERIREKYTWEKIADQYEEL 361 (363)
T ss_pred hCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 8663 34444555566654 47888877777654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.7e-15 Score=168.99 Aligned_cols=194 Identities=15% Similarity=0.179 Sum_probs=141.0
Q ss_pred EEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCccc--ccCHHHHHHHHHHHHHh-CCCCCCcE
Q 002984 297 VYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDI--FKGISLKLLAMEQLLQQ-HPGMRGKV 370 (861)
Q Consensus 297 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~--~KGi~~~l~Af~~ll~~-~P~~~~~v 370 (861)
.++.++|+|||...+... .. ...++.+ .++.+++.+++... .||+...++|++.+.++ .|+ +
T Consensus 159 ~~~~vi~ngi~~~~~~~~-----~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPR-----DK---REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----I 226 (365)
T ss_pred CceEEeCCCCcccccCCC-----cH---HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----e
Confidence 367789999998877421 11 1223333 34566666666644 89999999999988665 344 4
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCC-HHHHHHHHHhcccceecccccCCCCccee
Q 002984 371 VLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP-RFEKSAYYAVAECCIVNAVRDGMNLVPYK 449 (861)
Q Consensus 371 vLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~-~~el~aly~~ADv~vvtS~~EG~nLv~~E 449 (861)
.++.+|... ...+ . +....+.+.+.++ .+++..+|+.||+++.||..||||++++|
T Consensus 227 ~~~i~G~~~-----~~~~--~----------------~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEIP--P----------------DLPFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhhh--c----------------cCCCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 588777432 1000 0 1113456677787 88999999999999999999999999999
Q ss_pred eeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q 002984 450 YIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYR 526 (861)
Q Consensus 450 a~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~ 526 (861)
||+| +.|+|+|..+|..+.+. .++++++.|++++|++|.++++. ++++..+.++.++
T Consensus 284 am~~-------------------g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~~ 343 (365)
T cd03825 284 ALAC-------------------GTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLAD-PDEREELGEAARE 343 (365)
T ss_pred HHhc-------------------CCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Confidence 9999 45689999888888773 48999999999999999999974 3445555566666
Q ss_pred hhc-cCCHhHHHHHHHHHHH
Q 002984 527 YVS-THDVAYWARSFAQDLE 545 (861)
Q Consensus 527 ~v~-~~~~~~W~~~fl~~l~ 545 (861)
++. .+++...++++++-++
T Consensus 344 ~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 344 LAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHHhcCHHHHHHHHHHHHh
Confidence 664 5888888888876554
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.66 E-value=1e-14 Score=167.76 Aligned_cols=285 Identities=17% Similarity=0.170 Sum_probs=177.9
Q ss_pred HHHHHHHHcCCCCCEEEEeCcccccHHHHHHh-hcCCCeEEEEEecCCC-ChHHHhcCCchHHHHHHhh-cCCEEeecCh
Q 002984 187 FADKVMEVINPDDDCVWVHDYHLMVLPTFLRK-RFNRIKLGFFLHSPFP-SSEIYRTLPVRDEILRGLL-NCDLIGFHTF 263 (861)
Q Consensus 187 fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~-~~~~~~i~~flH~PfP-~~e~f~~lp~r~~il~~ll-~~dligF~t~ 263 (861)
...++++..+| |+|++|.+.++ |.++.. +..++++.+..|.-.+ +...|+.+ ..+.+.++ .+|.|-.++.
T Consensus 115 ~~~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~ 187 (425)
T PRK05749 115 AVRRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSE 187 (425)
T ss_pred HHHHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCH
Confidence 44555677788 89999988765 555533 3345777776554322 22233322 22333333 4799999998
Q ss_pred HhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEeccc-CCchHHHHhhCCchhHHHHHHHHHHc-CCCeEEEeec
Q 002984 264 DYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVG-VHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGID 341 (861)
Q Consensus 264 ~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~G-Id~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vd 341 (861)
...+.+.+ +|+. .. +.++|++ +|.... +........+++.+ .+++++++++
T Consensus 188 ~~~~~l~~-----~g~~---------------~~-i~vi~n~~~d~~~~------~~~~~~~~~~r~~~~~~~~vil~~~ 240 (425)
T PRK05749 188 EDAERFLA-----LGAK---------------NE-VTVTGNLKFDIEVP------PELAARAATLRRQLAPNRPVWIAAS 240 (425)
T ss_pred HHHHHHHH-----cCCC---------------CC-cEecccccccCCCC------hhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 88877764 2321 11 2344542 222111 11112334566666 6788899998
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHH-HHHHHHHHHHHHHHhhc---cCCCCcc----cEE
Q 002984 342 DMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDV-QEAKKETYLTAKRINEV---YGSPNYE----PVV 413 (861)
Q Consensus 342 rld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~-~~~~~~v~~l~~~IN~~---~~~~~~~----pvv 413 (861)
+. .|+...+++||.++++++|+++ |+++| ++++. +++++.++ +.+-. +.. +.. ..+
T Consensus 241 ~~--~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r~~~l~~~~~----~~gl~~~~~~~-~~~~~~~~~v 304 (425)
T PRK05749 241 TH--EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPERFKEVEELLK----KAGLSYVRRSQ-GEPPSADTDV 304 (425)
T ss_pred CC--chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhhHHHHHHHHH----hCCCcEEEccC-CCCCCCCCcE
Confidence 75 6889999999999998899876 77776 44543 34444433 32211 100 000 123
Q ss_pred EEcCCCCHHHHHHHHHhccccee-cccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCccc----C
Q 002984 414 LIDRPVPRFEKSAYYAVAECCIV-NAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS----L 488 (861)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vv-tS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~----l 488 (861)
++.+ +..|+..+|+.||++++ +|..||+|++++|||+| +.|+|++...|...+ +
T Consensus 305 ~l~~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~-------------------G~PVI~g~~~~~~~e~~~~~ 363 (425)
T PRK05749 305 LLGD--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAF-------------------GVPVISGPHTFNFKEIFERL 363 (425)
T ss_pred EEEe--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHh-------------------CCCEEECCCccCHHHHHHHH
Confidence 3333 36799999999999665 68889999999999999 456887765443322 2
Q ss_pred -CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHH
Q 002984 489 -SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 489 -~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 545 (861)
.++.++.|.|.+++|++|.++++ +++.+..+.++.++++.++. .-+++.++.+.
T Consensus 364 ~~~g~~~~~~d~~~La~~l~~ll~-~~~~~~~m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 364 LQAGAAIQVEDAEDLAKAVTYLLT-DPDARQAYGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred HHCCCeEEECCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 45778889999999999999997 45566667777788886652 33344444443
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.5e-14 Score=163.34 Aligned_cols=239 Identities=10% Similarity=-0.014 Sum_probs=156.0
Q ss_pred cCCCCCEEEEeCccccc--HHHHHHhhcCCCeEEEEEecCCCChHHHhc-C---C----chHHHHHHh-hcCCEEeecCh
Q 002984 195 INPDDDCVWVHDYHLMV--LPTFLRKRFNRIKLGFFLHSPFPSSEIYRT-L---P----VRDEILRGL-LNCDLIGFHTF 263 (861)
Q Consensus 195 ~~p~~D~VwvhDyhl~l--lp~~lr~~~~~~~i~~flH~PfP~~e~f~~-l---p----~r~~il~~l-l~~dligF~t~ 263 (861)
.+| |+|++|..+.+. ++..+-.+..+.|+.+.+|..+.+ .+.. . + ....+-+.+ -.+|.|-..+.
T Consensus 99 ~~~--DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~ 174 (371)
T PLN02275 99 PRP--DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTK 174 (371)
T ss_pred CCC--CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCH
Confidence 466 899999877532 344444444568899999975411 1110 0 0 011111222 23677776666
Q ss_pred HhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCc
Q 002984 264 DYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDM 343 (861)
Q Consensus 264 ~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrl 343 (861)
...+...+ . .|.. +.++|+|+ .+.|.+... . ..++ ...+.++++++|+
T Consensus 175 ~~~~~l~~----~----------------~g~~--i~vi~n~~-~~~f~~~~~-----~--~~~~--~~~~~~i~~~grl 222 (371)
T PLN02275 175 AMQHELDQ----N----------------WGIR--ATVLYDQP-PEFFRPASL-----E--IRLR--PNRPALVVSSTSW 222 (371)
T ss_pred HHHHHHHH----h----------------cCCC--eEEECCCC-HHHcCcCCc-----h--hccc--CCCcEEEEEeCce
Confidence 55544332 0 0111 56778884 455542110 0 1111 1235678899999
Q ss_pred ccccCHHHHHHHHHHHHH-----------------hCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCC
Q 002984 344 DIFKGISLKLLAMEQLLQ-----------------QHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGS 406 (861)
Q Consensus 344 d~~KGi~~~l~Af~~ll~-----------------~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~ 406 (861)
.+.||+..+++|+..+.. ++|+ +.|+.+| +|++.+++++++.+
T Consensus 223 ~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~~~~~~----------- 282 (371)
T PLN02275 223 TPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKAMYEEKISR----------- 282 (371)
T ss_pred eccCCHHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHHHHHHHHHH-----------
Confidence 999999999999988752 3455 4598888 45555556555543
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhcccceecc---cccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCC
Q 002984 407 PNYEPVVLIDRPVPRFEKSAYYAVAECCIVNA---VRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG 483 (861)
Q Consensus 407 ~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS---~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 483 (861)
.+...++++.+.++.+++..+|+.||+||+|+ ..|||+++.+||||| +.|+|+|..+|
T Consensus 283 ~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~-------------------G~PVVa~~~gg 343 (371)
T PLN02275 283 LNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGC-------------------GLPVCAVSYSC 343 (371)
T ss_pred cCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHC-------------------CCCEEEecCCC
Confidence 23345777777899999999999999999853 348999999999999 45689999888
Q ss_pred CcccCC---CceEeCCCCHHHHHHHHHHHh
Q 002984 484 CSPSLS---GAIRVNPWDIDAVADAMTLAI 510 (861)
Q Consensus 484 ~~~~l~---~ai~vnP~d~~~~A~ai~~aL 510 (861)
..+.+. .|++|+ |++++|++|.++|
T Consensus 344 ~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 344 IGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred hHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 887772 478886 6999999998765
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.5e-14 Score=163.23 Aligned_cols=292 Identities=18% Similarity=0.172 Sum_probs=194.7
Q ss_pred CEEEEeCcccccHHHHHHhh---cCCCeEEEEEecC-----CC-ChHHHhcCCc---h----------HHHHHHhhcCCE
Q 002984 200 DCVWVHDYHLMVLPTFLRKR---FNRIKLGFFLHSP-----FP-SSEIYRTLPV---R----------DEILRGLLNCDL 257 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~---~~~~~i~~flH~P-----fP-~~e~f~~lp~---r----------~~il~~ll~~dl 257 (861)
|+|++||||.-|+|.++++. ...++..|+.|-= || ...-.-.||. . .-+--|+..+|.
T Consensus 132 DIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~ 211 (487)
T COG0297 132 DIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADA 211 (487)
T ss_pred CEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccE
Confidence 99999999999999999997 7789999999932 23 1122223441 1 234446667777
Q ss_pred EeecChHhHHHHHHHHHHHhCCccccCCCee-eEEecCeEEEEEEecccCCchHHHHhhCC-----------chhHHHHH
Q 002984 258 IGFHTFDYARHFLSCCSRMLGLDYESKRGHI-GLDYFGRTVYIKILPVGVHMGRLESVLNL-----------PATATKIK 325 (861)
Q Consensus 258 igF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~-~~~~~gr~~~i~v~p~GId~~~~~~~~~~-----------~~~~~~~~ 325 (861)
|.--++.|+..-... ..| .|.. .+.+ +.-.+.-+=+|||.....+.... +.-.....
T Consensus 212 vttVSptYa~Ei~t~---~~g------~gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~ 280 (487)
T COG0297 212 VTTVSPTYAGEIYTP---EYG------EGLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKV 280 (487)
T ss_pred EEEECHHHHHhhccc---ccc------ccchhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHH
Confidence 777777777654410 000 0000 0111 11234444567776544321100 01112233
Q ss_pred HHHHHc-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHH
Q 002984 326 EIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRI 400 (861)
Q Consensus 326 ~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~I 400 (861)
.|++.+ .+.+++..|+|++..||++.+++|++.++++. ++ ||.+|.+ -.+++..+..+++++
T Consensus 281 ~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g-------d~~le~~~~~la~~~ 347 (487)
T COG0297 281 ALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG-------DPELEEALRALASRH 347 (487)
T ss_pred HHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC-------cHHHHHHHHHHHHhc
Confidence 455555 24689999999999999999999999999987 55 7878743 156777888888877
Q ss_pred hhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEecc
Q 002984 401 NEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE 480 (861)
Q Consensus 401 N~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se 480 (861)
..++ .+.-..+..-...+|..||++++||..|++||+-+++|.- ++++|+.+
T Consensus 348 ~~~~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry-------------------GtvpIv~~ 399 (487)
T COG0297 348 PGRV---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY-------------------GTLPIVRE 399 (487)
T ss_pred CceE---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc-------------------CCcceEcc
Confidence 5432 2333345556678999999999999999999999999997 67899999
Q ss_pred CCCCcccCC-----------CceEeCCCCHHHHHHHHHHHhcCC---HH-HHHHHHHHhhhhhccCCHhHHHHHHHHHHH
Q 002984 481 FIGCSPSLS-----------GAIRVNPWDIDAVADAMTLAINMR---DS-EKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 481 ~~G~~~~l~-----------~ai~vnP~d~~~~A~ai~~aL~m~---~~-e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 545 (861)
.+|.++.+. .|+++.|.|.++++.||.+|+..- +. -+..+..+|. ...++..=+.++..-.+
T Consensus 400 tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~ 476 (487)
T COG0297 400 TGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYK 476 (487)
T ss_pred cCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHH
Confidence 999998883 268888889999999999998753 22 2222222332 34555666666655444
Q ss_pred H
Q 002984 546 R 546 (861)
Q Consensus 546 ~ 546 (861)
.
T Consensus 477 ~ 477 (487)
T COG0297 477 P 477 (487)
T ss_pred H
Confidence 4
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.2e-15 Score=146.91 Aligned_cols=143 Identities=25% Similarity=0.379 Sum_probs=111.8
Q ss_pred CCCeEEEeecCcccccCHHHHHHHHHHHHHh-CCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 002984 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQ-HPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (861)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~-~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~ 410 (861)
.++++|++++|+++.||+..+++|+..+.++ .|++. |+.+|. ++....++..+. .. +..
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~-----~~~~~~~~~~~~----~~-------~~~ 72 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYK----LVIVGD-----GEYKKELKNLIE----KL-------NLK 72 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEE----EEEESH-----CCHHHHHHHHHH----HT-------TCG
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeE----EEEEcc-----cccccccccccc----cc-------ccc
Confidence 6789999999999999999999999999875 66654 777772 222233333332 21 222
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC-
Q 002984 411 PVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS- 489 (861)
Q Consensus 411 pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~- 489 (861)
..+.+.+.++.+++.++|+.||++|.||..||+|++++|||+| +.|+|+|..+|..+.+.
T Consensus 73 ~~i~~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~-------------------g~pvI~~~~~~~~e~~~~ 133 (172)
T PF00534_consen 73 ENIIFLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC-------------------GCPVIASDIGGNNEIIND 133 (172)
T ss_dssp TTEEEEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT-------------------T-EEEEESSTHHHHHSGT
T ss_pred ccccccccccccccccccccceecccccccccccccccccccc-------------------ccceeeccccCCceeecc
Confidence 3345566777999999999999999999999999999999999 66799999777777772
Q ss_pred --CceEeCCCCHHHHHHHHHHHhcCC
Q 002984 490 --GAIRVNPWDIDAVADAMTLAINMR 513 (861)
Q Consensus 490 --~ai~vnP~d~~~~A~ai~~aL~m~ 513 (861)
.|++++|.|+++++++|.+++..+
T Consensus 134 ~~~g~~~~~~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 134 GVNGFLFDPNDIEELADAIEKLLNDP 159 (172)
T ss_dssp TTSEEEESTTSHHHHHHHHHHHHHHH
T ss_pred ccceEEeCCCCHHHHHHHHHHHHCCH
Confidence 368999999999999999999855
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.3e-13 Score=149.34 Aligned_cols=267 Identities=13% Similarity=0.110 Sum_probs=167.2
Q ss_pred cCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCc-hHHHHHHhhcCCEEeecChHhHHHHHHHH
Q 002984 195 INPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPV-RDEILRGLLNCDLIGFHTFDYARHFLSCC 273 (861)
Q Consensus 195 ~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~-r~~il~~ll~~dligF~t~~~~~~Fl~~~ 273 (861)
.+.++.++|.+..-...+... .+..++.+-+|-.|+..... -+. ....-..+-.||+|-..+....+++..
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~-- 170 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR-- 170 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh--
Confidence 355557899886555544444 45677888877655432211 000 111223345689888777655543221
Q ss_pred HHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHH
Q 002984 274 SRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKL 353 (861)
Q Consensus 274 ~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l 353 (861)
+ + .++.++|+|+|.+.|......+.. .+.+ ...++++|+++|+++..+++. +|
T Consensus 171 ------------------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll 223 (373)
T cd04950 171 ------------------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LL 223 (373)
T ss_pred ------------------C-C--CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HH
Confidence 1 1 246779999999999643221110 1111 114678999999999966654 33
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccc
Q 002984 354 LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAEC 433 (861)
Q Consensus 354 ~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv 433 (861)
. .+.+.+|+++ |+.||... . . .+. .+ + .. .+-+.+.|.++.+++.++|+.||+
T Consensus 224 ~---~la~~~p~~~----~vliG~~~--~-~--~~~-~~-------~------~~-~~nV~~~G~~~~~~l~~~l~~~Dv 276 (373)
T cd04950 224 E---ALAKARPDWS----FVLIGPVD--V-S--IDP-SA-------L------LR-LPNVHYLGPKPYKELPAYLAGFDV 276 (373)
T ss_pred H---HHHHHCCCCE----EEEECCCc--C-c--cCh-hH-------h------cc-CCCEEEeCCCCHHHHHHHHHhCCE
Confidence 3 3445678876 88888431 0 0 111 00 0 01 134567789999999999999999
Q ss_pred ceeccc-----ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCCCceEeCCCCHHHHHHHHHH
Q 002984 434 CIVNAV-----RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTL 508 (861)
Q Consensus 434 ~vvtS~-----~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~ 508 (861)
+++|+. +.++++..+|||||+ .|+|+|.+.++.+. .++..+.+.|.++++++|.+
T Consensus 277 ~l~P~~~~~~~~~~~P~Kl~EylA~G-------------------~PVVat~~~~~~~~-~~~~~~~~~d~~~~~~ai~~ 336 (373)
T cd04950 277 AILPFRLNELTRATSPLKLFEYLAAG-------------------KPVVATPLPEVRRY-EDEVVLIADDPEEFVAAIEK 336 (373)
T ss_pred EecCCccchhhhcCCcchHHHHhccC-------------------CCEEecCcHHHHhh-cCcEEEeCCCHHHHHHHHHH
Confidence 999985 457789999999994 45787776554433 33444556799999999999
Q ss_pred HhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHH
Q 002984 509 AINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546 (861)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 546 (861)
+|..+..++..+. .+.+.+|++..-++.+++.|..
T Consensus 337 ~l~~~~~~~~~~~---~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 337 ALLEDGPARERRR---LRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHhcCCchHHHHH---HHHHHHCCHHHHHHHHHHHHHh
Confidence 8865544333322 2267789998888888866553
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.4e-13 Score=130.63 Aligned_cols=203 Identities=18% Similarity=0.172 Sum_probs=123.1
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc--cCCceEecCcEEEEeCC
Q 002984 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC--EMLGIAAEHGYFIRWNK 666 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~--~~lgliaenG~~i~~~~ 666 (861)
.+.++||+|+||||++ ....+ +.....+.+| ++.|..|+++|..+..++..+-..+ +.+++++|||+.|+.+.
T Consensus 5 ~~~~lIFtDlD~TLl~---~~ye~-~pA~pv~~el-~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 5 QMPLLIFTDLDGTLLP---HSYEW-QPAAPVLLEL-KDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred ccceEEEEcccCcccC---CCCCC-CccchHHHHH-HHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 4679999999999999 22222 2334466666 6889999999999999888877664 45789999999998764
Q ss_pred cce-EEecC------CccChH-HHHHHHHHHHHHhhcCCCceEeeccc--eeEee-----------eccCCccchhccHH
Q 002984 667 TSE-WETNH------LGADLE-WKKIVEPVMRSYTEATDGSNIEIKES--ALVWH-----------HQDADPDFGSCQAK 725 (861)
Q Consensus 667 ~~~-~~~~~------~~~~~~-w~~~v~~i~~~y~~~~~gs~ie~k~~--~l~~~-----------~~~~d~~~~~~~a~ 725 (861)
+-. +.... ...... -.+.+++.++...+...-.++.+-.. ...|. -+.....+..+..+
T Consensus 80 ~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs~d 159 (274)
T COG3769 80 GWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRSSD 159 (274)
T ss_pred cccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeecccc
Confidence 311 10000 000110 01122222222211111111110000 00000 00000000111223
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 726 ELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 726 el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+...++...+...++.++.|..+..+......||.|++++++.+...+. ..-++++||+.||.+||+....
T Consensus 160 ~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~-~r~t~~~GDg~nD~Pl~ev~d~ 230 (274)
T COG3769 160 ERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGG-ARTTLGLGDGPNDAPLLEVMDY 230 (274)
T ss_pred hHHHHHHHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhcCc-eeEEEecCCCCCcccHHHhhhh
Confidence 4555666677777888999999989999988999999999998743332 2359999999999999999985
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.1e-13 Score=144.22 Aligned_cols=201 Identities=17% Similarity=0.149 Sum_probs=147.3
Q ss_pred HHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc-CCCeEEEeecCcccccCHHH
Q 002984 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDIFKGISL 351 (861)
Q Consensus 273 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~~KGi~~ 351 (861)
..|.+.+++.++.+.+ +.-.-..-+|.++|+-++...|.+.... +. .+...|+.++||-+.||+++
T Consensus 146 id~~IcVshtskentv-lr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDl 212 (426)
T KOG1111|consen 146 IDRIICVSHTSKENTV-LRGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDL 212 (426)
T ss_pred CCcEEEEeecCCCceE-EEeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHH
Confidence 3455566777766542 2222234478999999999999753221 22 45588999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q 002984 352 KLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVA 431 (861)
Q Consensus 352 ~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~A 431 (861)
++....++-++||+.+ ++.+| +||....+++-+++. ..+..+-+.|.++++++-..|...
T Consensus 213 l~~iIp~vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~-----------~l~~rV~~lG~v~h~~Vr~vl~~G 272 (426)
T KOG1111|consen 213 LLEIIPSVCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL-----------FLQDRVVMLGTVPHDRVRDVLVRG 272 (426)
T ss_pred HHHHHHHHHhcCCCee----EEEec-----CCcccchHHHHHHHh-----------hccCceEEecccchHHHHHHHhcC
Confidence 9999999999999988 88777 666544454444432 122455677899999999999999
Q ss_pred ccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCCCc-eEeCCCCHHHHHHHHHHHh
Q 002984 432 ECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGA-IRVNPWDIDAVADAMTLAI 510 (861)
Q Consensus 432 Dv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a-i~vnP~d~~~~A~ai~~aL 510 (861)
|+|+.||+.|.|+++..||+.| |-++|.+..+|..+.|... +..-+-.++++++++.+|+
T Consensus 273 ~IFlntSlTEafc~~ivEAaSc-------------------GL~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai 333 (426)
T KOG1111|consen 273 DIFLNTSLTEAFCMVIVEAASC-------------------GLPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAI 333 (426)
T ss_pred cEEeccHHHHHHHHHHHHHHhC-------------------CCEEEEeecCCccccCCccceeccCCChHHHHHHHHHHH
Confidence 9999999999999999999999 3446777777777777443 5456668899999999988
Q ss_pred cCC---HHHHHHHHHHhh
Q 002984 511 NMR---DSEKQLRHEKHY 525 (861)
Q Consensus 511 ~m~---~~e~~~r~~~~~ 525 (861)
+.- +++...|.+++|
T Consensus 334 ~~~~~~p~~~h~~v~~~y 351 (426)
T KOG1111|consen 334 TKLRTLPLEFHDRVKKMY 351 (426)
T ss_pred HHhccCchhHHHHHHHhc
Confidence 632 233344444444
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.2e-11 Score=134.03 Aligned_cols=190 Identities=11% Similarity=0.094 Sum_probs=122.3
Q ss_pred EEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccccCHHHHHHHHHHHHHh----CCCCCCcE
Q 002984 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGISLKLLAMEQLLQQ----HPGMRGKV 370 (861)
Q Consensus 298 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~----~P~~~~~v 370 (861)
+|.+++++|+...+.. +. ....+++++ .++++|+.+||....||+...++++..++.. .|+.+
T Consensus 174 ki~v~g~~v~~~f~~~----~~---~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~--- 243 (382)
T PLN02605 174 QIRVYGLPIRPSFARA----VR---PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ--- 243 (382)
T ss_pred HEEEECcccCHhhccC----CC---CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce---
Confidence 4455677887643321 11 123456666 4688999999999999999999999876521 34332
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceee
Q 002984 371 VLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKY 450 (861)
Q Consensus 371 vLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea 450 (861)
.++++| +++ ++++++.+... ...+.+.|.++ ++..||++||++|.+| .++++.||
T Consensus 244 ~~vi~G-----~~~---~~~~~L~~~~~-----------~~~v~~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~EA 298 (382)
T PLN02605 244 VVVICG-----RNK---KLQSKLESRDW-----------KIPVKVRGFVT--NMEEWMGACDCIITKA----GPGTIAEA 298 (382)
T ss_pred EEEEEC-----CCH---HHHHHHHhhcc-----------cCCeEEEeccc--cHHHHHHhCCEEEECC----CcchHHHH
Confidence 233343 222 22333332210 01234666664 7999999999999866 37899999
Q ss_pred eeeecCCCcccccccCCCCCCCCceEEeccCC-----CCcccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHh
Q 002984 451 IVCRQGTPIMDEALGRERDSPHTSMLVVSEFI-----GCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKH 524 (861)
Q Consensus 451 ~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-----G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~ 524 (861)
|+| +.|+|++... |.++.+ .++.-+.+.|+++++++|.+++..+++.++.+.++.
T Consensus 299 ma~-------------------g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~ 359 (382)
T PLN02605 299 LIR-------------------GLPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENA 359 (382)
T ss_pred HHc-------------------CCCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999 4558888752 333434 333344468999999999999986455666666777
Q ss_pred hhhhccCCHhHHHHHHH
Q 002984 525 YRYVSTHDVAYWARSFA 541 (861)
Q Consensus 525 ~~~v~~~~~~~W~~~fl 541 (861)
+++...+....-++.++
T Consensus 360 ~~~~~~~a~~~i~~~l~ 376 (382)
T PLN02605 360 LKLARPEAVFDIVHDLH 376 (382)
T ss_pred HHhcCCchHHHHHHHHH
Confidence 77776676655555444
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.3e-10 Score=127.88 Aligned_cols=186 Identities=14% Similarity=0.124 Sum_probs=140.7
Q ss_pred CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCC-CcEEEEEEecC-CCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 002984 334 KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMR-GKVVLVQIVNP-ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (861)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~-~~vvLvqi~~p-~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~p 411 (861)
..++..+.|+.+-||+...|.||..+...-|+.. ....++..+++ +.+...+..++.+++.+++++.+ -+..
T Consensus 273 d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~------l~g~ 346 (495)
T KOG0853|consen 273 DRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYD------LLGQ 346 (495)
T ss_pred ceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhC------ccCc
Confidence 6789999999999999999999999988776511 12344444433 33444555566677777777642 1235
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC---
Q 002984 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL--- 488 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--- 488 (861)
.++|..+.++.+.+.+++.+.+..+++..|.||+|++|||+| +-|+|++..+|..+.+
T Consensus 347 ~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~-------------------glPvvAt~~GGP~EiV~~~ 407 (495)
T KOG0853|consen 347 FVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMAC-------------------GLPVVATNNGGPAEIVVHG 407 (495)
T ss_pred eEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhc-------------------CCCEEEecCCCceEEEEcC
Confidence 778877888888888888888888999999999999999999 4569999999999998
Q ss_pred CCceEeCCCCHH---HHHHHHHHHhcCCHHHHHHHHHHhhhhhcc-CCHhHHHHHHHHHHHHHHHh
Q 002984 489 SGAIRVNPWDID---AVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQDLERACRD 550 (861)
Q Consensus 489 ~~ai~vnP~d~~---~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~fl~~l~~~~~~ 550 (861)
..|++++| +.+ .+|++|.+..+.+. .+....++.++.|.+ +++ +.|.+.+.....+
T Consensus 408 ~tG~l~dp-~~e~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~----~~~~~ri~~~~~~ 467 (495)
T KOG0853|consen 408 VTGLLIDP-GQEAVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSW----QHYSERIASVLGK 467 (495)
T ss_pred CcceeeCC-chHHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhH----HHHHHHHHHHhHh
Confidence 35999999 676 59999999998554 477778888888877 555 5555555554443
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.7e-10 Score=118.94 Aligned_cols=111 Identities=15% Similarity=0.174 Sum_probs=81.1
Q ss_pred eecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCC
Q 002984 339 GIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRP 418 (861)
Q Consensus 339 ~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~ 418 (861)
++||+.+.||+...++|+..+.+++|+++ ++.+|... +....+..+.. .+...-+.+.+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~-----~~~~~~~~~~~-----------~~~~~~v~~~~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP-----EREYLEELLAA-----------LLLLDRVIFLGG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC-----ChHHHHHHHHh-----------cCCcccEEEeCC
Confidence 89999999999999999999998888765 88888432 11111111111 112233445555
Q ss_pred C-CHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC
Q 002984 419 V-PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL 488 (861)
Q Consensus 419 v-~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (861)
+ +.+++..+++.||+++.||..||++.+.+|||+| +.|+|+|+..|..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~-------------------g~pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMAC-------------------GLPVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhC-------------------CCCEEEcCCCCcceEE
Confidence 5 5566666777799999999999999999999999 4568999998877655
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.14 E-value=7.6e-10 Score=120.08 Aligned_cols=197 Identities=20% Similarity=0.267 Sum_probs=139.7
Q ss_pred EEEEecccCCchHHHHhhCCchhHHHHHHHHHH-cCC--CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 002984 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQ-FDG--KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (861)
Q Consensus 298 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~-~~~--~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvq 374 (861)
.+.+.|.|++...+... +.. ... +.++++++|+++.||+...++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPA-------------RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCcc-------------ccCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 56678999999877531 000 112 47899999999999999999999999887766 34676
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeee
Q 002984 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (861)
Q Consensus 375 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~ 454 (861)
+|..... ...+.. ++.+.+ ..+.+.+.+.++.+++..+|+.||++++||..||+|++.+|||+|
T Consensus 236 ~g~~~~~----~~~~~~----~~~~~~-------~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~- 299 (381)
T COG0438 236 VGDGPER----REELEK----LAKKLG-------LEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA- 299 (381)
T ss_pred EcCCCcc----HHHHHH----HHHHhC-------CCCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc-
Confidence 6643211 122222 332221 124555688888889999999999999999999999999999999
Q ss_pred cCCCcccccccCCCCCCCCceEEeccCCCCcccCCC---ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh-cc
Q 002984 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSG---AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-ST 530 (861)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~ 530 (861)
+.|+|+|...|..+.+.. ++++++.|.+++++++..+++++ +.++...+..++.+ ..
T Consensus 300 ------------------g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~ 360 (381)
T COG0438 300 ------------------GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEE 360 (381)
T ss_pred ------------------CCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHh
Confidence 456899999988888843 77888888999999999999877 33333333233333 45
Q ss_pred CCHhHHHHHHHHHHHH
Q 002984 531 HDVAYWARSFAQDLER 546 (861)
Q Consensus 531 ~~~~~W~~~fl~~l~~ 546 (861)
+++..-+..+..-+..
T Consensus 361 ~~~~~~~~~~~~~~~~ 376 (381)
T COG0438 361 FSWERIAEQLLELYEE 376 (381)
T ss_pred cCHHHHHHHHHHHHHH
Confidence 6666666555554444
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=7.7e-09 Score=117.28 Aligned_cols=274 Identities=11% Similarity=0.059 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEe
Q 002984 180 YVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIG 259 (861)
Q Consensus 180 Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dlig 259 (861)
+...+..-..++++..+| |+|..| +....++.+.+.+..++++....+-..+. ...+.+ .+|.+-
T Consensus 88 ~~~~~~~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~td~~~~---------~~~~~~---~ad~i~ 152 (380)
T PRK13609 88 YANFGRKRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVLTDFCLH---------KIWVHR---EVDRYF 152 (380)
T ss_pred HHHHHHHHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeCCCCCC---------cccccC---CCCEEE
Confidence 344444555677777788 888885 66667887776666667765333211111 011111 589888
Q ss_pred ecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCch-HHHHhhCCchhHHHHHHHHHHc---CCCe
Q 002984 260 FHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMG-RLESVLNLPATATKIKEIEKQF---DGKK 335 (861)
Q Consensus 260 F~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~-~~~~~~~~~~~~~~~~~l~~~~---~~~~ 335 (861)
..+....+.+.+ .|+.. .+|.++ |++.. .|... .. ...+++++ ++++
T Consensus 153 ~~s~~~~~~l~~-----~gi~~---------------~ki~v~--G~p~~~~f~~~---~~----~~~~~~~~~l~~~~~ 203 (380)
T PRK13609 153 VATDHVKKVLVD-----IGVPP---------------EQVVET--GIPIRSSFELK---IN----PDIIYNKYQLCPNKK 203 (380)
T ss_pred ECCHHHHHHHHH-----cCCCh---------------hHEEEE--CcccChHHcCc---CC----HHHHHHHcCCCCCCc
Confidence 777654444332 13210 122222 33332 23211 11 12245554 2444
Q ss_pred -EEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEE
Q 002984 336 -LILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVL 414 (861)
Q Consensus 336 -vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~ 414 (861)
+++..|++...||+...++++.+ .|+++ ++.+++. +++ +++++++++++. + ..| .
T Consensus 204 ~il~~~G~~~~~k~~~~li~~l~~----~~~~~----~viv~G~---~~~----~~~~l~~~~~~~----~----~~v-~ 259 (380)
T PRK13609 204 ILLIMAGAHGVLGNVKELCQSLMS----VPDLQ----VVVVCGK---NEA----LKQSLEDLQETN----P----DAL-K 259 (380)
T ss_pred EEEEEcCCCCCCcCHHHHHHHHhh----CCCcE----EEEEeCC---CHH----HHHHHHHHHhcC----C----CcE-E
Confidence 56667899999999988888642 35554 6666532 122 333444433321 1 134 4
Q ss_pred EcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccC-CCCc----ccC-
Q 002984 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF-IGCS----PSL- 488 (861)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~----~~l- 488 (861)
+.+.+ +++..+|+.||++|. ++.|++.+|||+|+ .|+|++.. .|.. ..+
T Consensus 260 ~~g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g-------------------~PvI~~~~~~g~~~~n~~~~~ 314 (380)
T PRK13609 260 VFGYV--ENIDELFRVTSCMIT----KPGGITLSEAAALG-------------------VPVILYKPVPGQEKENAMYFE 314 (380)
T ss_pred EEech--hhHHHHHHhccEEEe----CCCchHHHHHHHhC-------------------CCEEECCCCCCcchHHHHHHH
Confidence 44665 468899999999874 44589999999994 45777653 3321 112
Q ss_pred CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHH
Q 002984 489 SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (861)
Q Consensus 489 ~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 547 (861)
..+..+.+.|.++++++|.++++. ++.+..+.++.+++...++....++.+++.+...
T Consensus 315 ~~G~~~~~~~~~~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 315 RKGAAVVIRDDEEVFAKTEALLQD-DMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred hCCcEEEECCHHHHHHHHHHHHCC-HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 234445568999999999999984 3444455556666667788888888877666543
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.5e-09 Score=118.52 Aligned_cols=251 Identities=15% Similarity=0.136 Sum_probs=144.9
Q ss_pred HHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhh--cCCEEeecC
Q 002984 185 KIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDLIGFHT 262 (861)
Q Consensus 185 ~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll--~~dligF~t 262 (861)
..|++. ++..+| |+|++|......+...+-.+..++|+...-+- .-+.+.+. |+.+++.+-+. -||++--.+
T Consensus 76 ~~l~~~-l~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g-~~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 76 EGLEEL-LLEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAG-LRTGDRYS--PMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHHH-HHHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCC-CCcCCCCC--CCccHHHHHHHHHHHHhccCCC
Confidence 445543 455677 99999966555555445444456777643221 11111111 12233323222 257666677
Q ss_pred hHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcC-C-CeEEEee
Q 002984 263 FDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFD-G-KKLILGI 340 (861)
Q Consensus 263 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~-~-~~vil~V 340 (861)
....+++++ +|+ ...+|.++++|+....+..... + ....+++++. + ..+++..
T Consensus 150 ~~~~~~l~~-----~G~---------------~~~~I~vign~~~d~~~~~~~~-~----~~~~~~~~~~~~~~~vl~~~ 204 (365)
T TIGR00236 150 EQAKDNLLR-----ENV---------------KADSIFVTGNTVIDALLTNVEI-A----YSSPVLSEFGEDKRYILLTL 204 (365)
T ss_pred HHHHHHHHH-----cCC---------------CcccEEEeCChHHHHHHHHHhh-c----cchhHHHhcCCCCCEEEEec
Confidence 766666653 132 1235677888863222221110 0 1123444452 2 3344445
Q ss_pred cCcc-cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCC
Q 002984 341 DDMD-IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419 (861)
Q Consensus 341 drld-~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v 419 (861)
.|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.+ +.+.. + ..+.+.+.+.+
T Consensus 205 hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~---~~~~~----~---~~~~v~~~~~~ 263 (365)
T TIGR00236 205 HRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREP---LHKHL----G---DSKRVHLIEPL 263 (365)
T ss_pred CchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHH---HHHHh----C---CCCCEEEECCC
Confidence 5653 45999999999999998888765 55554332 11 1211 12221 1 11234566788
Q ss_pred CHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec-cCCCCcccC-CC-ceEeCC
Q 002984 420 PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-EFIGCSPSL-SG-AIRVNP 496 (861)
Q Consensus 420 ~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l-~~-ai~vnP 496 (861)
+..++..+|+.||+++.+| |.+..|||+|+ .|+|++ ..+|..+.+ .+ ++++ |
T Consensus 264 ~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g-------------------~PvI~~~~~~~~~e~~~~g~~~lv-~ 318 (365)
T TIGR00236 264 EYLDFLNLAANSHLILTDS-----GGVQEEAPSLG-------------------KPVLVLRDTTERPETVEAGTNKLV-G 318 (365)
T ss_pred ChHHHHHHHHhCCEEEECC-----hhHHHHHHHcC-------------------CCEEECCCCCCChHHHhcCceEEe-C
Confidence 9999999999999999888 44579999994 447775 445544444 23 4566 6
Q ss_pred CCHHHHHHHHHHHhcC
Q 002984 497 WDIDAVADAMTLAINM 512 (861)
Q Consensus 497 ~d~~~~A~ai~~aL~m 512 (861)
.|+++++++|.++++.
T Consensus 319 ~d~~~i~~ai~~ll~~ 334 (365)
T TIGR00236 319 TDKENITKAAKRLLTD 334 (365)
T ss_pred CCHHHHHHHHHHHHhC
Confidence 8999999999999973
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.3e-09 Score=117.59 Aligned_cols=248 Identities=17% Similarity=0.118 Sum_probs=148.5
Q ss_pred HHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHH
Q 002984 188 ADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYAR 267 (861)
Q Consensus 188 a~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~ 267 (861)
+.++++..+| |+|+.|.... .++..+..+..++++.++-|..||.. . +.++. ..+|.|...+....+
T Consensus 81 ~~~~i~~~~p--DvI~~~~~~~-~~~~~~~a~~~~~p~v~~~~~~~~~~--~------~~~~~--~~~~~vi~~s~~~~~ 147 (350)
T cd03785 81 ARKILKKFKP--DVVVGFGGYV-SGPVGLAAKLLGIPLVIHEQNAVPGL--A------NRLLA--RFADRVALSFPETAK 147 (350)
T ss_pred HHHHHHhcCC--CEEEECCCCc-chHHHHHHHHhCCCEEEEcCCCCccH--H------HHHHH--HhhCEEEEcchhhhh
Confidence 3455666677 8999986544 44555555556677776666555421 0 11111 125666655543222
Q ss_pred HHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcc
Q 002984 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMD 344 (861)
Q Consensus 268 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld 344 (861)
. + ...++.++|+|+|.+.+... + . ++++ .++++++.+++..
T Consensus 148 ~-----------------------~--~~~~~~~i~n~v~~~~~~~~---~----~----~~~~~~~~~~~~i~~~~g~~ 191 (350)
T cd03785 148 Y-----------------------F--PKDKAVVTGNPVREEILALD---R----E----RARLGLRPGKPTLLVFGGSQ 191 (350)
T ss_pred c-----------------------C--CCCcEEEECCCCchHHhhhh---h----h----HHhcCCCCCCeEEEEECCcH
Confidence 1 0 11255678999998766421 0 0 2332 4677888888877
Q ss_pred cccCHHHHH-HHHHHHHHhCCCCCCcEEEE-EEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHH
Q 002984 345 IFKGISLKL-LAMEQLLQQHPGMRGKVVLV-QIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRF 422 (861)
Q Consensus 345 ~~KGi~~~l-~Af~~ll~~~P~~~~~vvLv-qi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~ 422 (861)
..|+....+ .|++.+.+ ++ +.++ ++| .+ +.+++++.++++ + +.+.+.+.+ +
T Consensus 192 ~~~~~~~~l~~a~~~l~~--~~----~~~~~i~G-----~g-~~~~l~~~~~~~--------~-----~~v~~~g~~--~ 244 (350)
T cd03785 192 GARAINEAVPEALAELLR--KR----LQVIHQTG-----KG-DLEEVKKAYEEL--------G-----VNYEVFPFI--D 244 (350)
T ss_pred hHHHHHHHHHHHHHHhhc--cC----eEEEEEcC-----Cc-cHHHHHHHHhcc--------C-----CCeEEeehh--h
Confidence 788876654 77766632 22 3333 344 22 334444433321 1 223455544 7
Q ss_pred HHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCC--------CcccC---CCc
Q 002984 423 EKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG--------CSPSL---SGA 491 (861)
Q Consensus 423 el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G--------~~~~l---~~a 491 (861)
++..+|+.||++|.+| | +.+++|||+|+. |+|++...| .++.+ ..+
T Consensus 245 ~~~~~l~~ad~~v~~s---g-~~t~~Eam~~G~-------------------Pvv~~~~~~~~~~~~~~~~~~l~~~g~g 301 (350)
T cd03785 245 DMAAAYAAADLVISRA---G-ASTVAELAALGL-------------------PAILIPLPYAADDHQTANARALVKAGAA 301 (350)
T ss_pred hHHHHHHhcCEEEECC---C-HhHHHHHHHhCC-------------------CEEEeecCCCCCCcHHHhHHHHHhCCCE
Confidence 8999999999999876 3 478999999944 467665433 12333 347
Q ss_pred eEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhH
Q 002984 492 IRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAY 535 (861)
Q Consensus 492 i~vnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~ 535 (861)
++++|. |.++++++|.+++. +++.++...++.++++..+...+
T Consensus 302 ~~v~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~ 346 (350)
T cd03785 302 VLIPQEELTPERLAAALLELLS-DPERLKAMAEAARSLARPDAAER 346 (350)
T ss_pred EEEecCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHH
Confidence 889887 89999999999996 45555555666666666554433
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.8e-09 Score=118.59 Aligned_cols=257 Identities=14% Similarity=0.066 Sum_probs=155.9
Q ss_pred HHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHH
Q 002984 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHF 269 (861)
Q Consensus 190 ~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~F 269 (861)
++++..+| |+|..|.....+ +..+..+....|+.++.|..+|.. -+.++- -.+|.+-..+..- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~-~~~~~~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSG-PGGLAARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchh-HHHHHHHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---h
Confidence 45566677 999999855433 344545566788887767555431 011111 1244443222210 0
Q ss_pred HHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCH
Q 002984 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGI 349 (861)
Q Consensus 270 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 349 (861)
. . ....++.++|+|++.+.+.. +.. ...+ ..-.+.++|+.+++....|++
T Consensus 149 ~--------------------~--~~~~~i~vi~n~v~~~~~~~----~~~---~~~~-~~~~~~~~i~~~gg~~~~~~~ 198 (357)
T PRK00726 149 P--------------------E--FFKPKAVVTGNPVREEILAL----AAP---PARL-AGREGKPTLLVVGGSQGARVL 198 (357)
T ss_pred h--------------------c--cCCCCEEEECCCCChHhhcc----cch---hhhc-cCCCCCeEEEEECCcHhHHHH
Confidence 0 0 11236788999999876542 110 0111 111467888999999999998
Q ss_pred HHHH-HHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002984 350 SLKL-LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (861)
Q Consensus 350 ~~~l-~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 428 (861)
...+ +|++++.+. | .+++++|. ++. +++.+.++ . +.. +.+.+.+ ++...+|
T Consensus 199 ~~~l~~a~~~~~~~-~-----~~~~~~G~-----g~~-~~~~~~~~---------~---~~~--v~~~g~~--~~~~~~~ 250 (357)
T PRK00726 199 NEAVPEALALLPEA-L-----QVIHQTGK-----GDL-EEVRAAYA---------A---GIN--AEVVPFI--DDMAAAY 250 (357)
T ss_pred HHHHHHHHHHhhhC-c-----EEEEEcCC-----CcH-HHHHHHhh---------c---CCc--EEEeehH--hhHHHHH
Confidence 7776 888777432 2 34666663 222 23322211 1 111 3455554 6899999
Q ss_pred HhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCC--------cccC---CCceEeCCC
Q 002984 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC--------SPSL---SGAIRVNPW 497 (861)
Q Consensus 429 ~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--------~~~l---~~ai~vnP~ 497 (861)
+.||+++.+| | +.+.+|||+|+. |+|++-..|. ++.+ ..+++++|.
T Consensus 251 ~~~d~~i~~~---g-~~~~~Ea~~~g~-------------------Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~ 307 (357)
T PRK00726 251 AAADLVICRA---G-ASTVAELAAAGL-------------------PAILVPLPHAADDHQTANARALVDAGAALLIPQS 307 (357)
T ss_pred HhCCEEEECC---C-HHHHHHHHHhCC-------------------CEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcc
Confidence 9999999877 3 578999999944 4666544321 2233 347888888
Q ss_pred C--HHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHH
Q 002984 498 D--IDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDL 544 (861)
Q Consensus 498 d--~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l 544 (861)
| +++++++|.++++. ++.++...+..+++....+...-++.+++.+
T Consensus 308 ~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 308 DLTPEKLAEKLLELLSD-PERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred cCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 8 99999999999985 4555666666777777788777777776654
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.1e-09 Score=107.81 Aligned_cols=70 Identities=23% Similarity=0.259 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecCCH--h
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLDDA--T 830 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~d~--~ 830 (861)
+|..+++.+++++ |++++++++|||+.||++|++.+|. +++|.++ +..|+|+++.+ +
T Consensus 76 ~k~~~~~~~~~~~---~~~~~~~~~vGDs~~D~~~~~~ag~--------------~~~v~~~~~~~~~~a~~i~~~~~~~ 138 (154)
T TIGR01670 76 NKLIAFSDILEKL---ALAPENVAYIGDDLIDWPVMEKVGL--------------SVAVADAHPLLIPRADYVTRIAGGR 138 (154)
T ss_pred chHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCC--------------eEecCCcCHHHHHhCCEEecCCCCC
Confidence 3889999999999 9999999999999999999999997 3445443 46788888755 3
Q ss_pred H-HHHHHHHHHhhc
Q 002984 831 D-VLKLLQGLATAS 843 (861)
Q Consensus 831 e-V~~~L~~L~~~~ 843 (861)
+ +.++++.+....
T Consensus 139 g~~~~~~~~~~~~~ 152 (154)
T TIGR01670 139 GAVREVCELLLLAQ 152 (154)
T ss_pred cHHHHHHHHHHHhh
Confidence 3 889998887654
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=8.9e-10 Score=111.81 Aligned_cols=124 Identities=19% Similarity=0.258 Sum_probs=90.2
Q ss_pred ccceEEEecCCccccCCC----CCCCCCCHHHH---HHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEE
Q 002984 589 TERRAIFLDYDGTVVPET----SIIKSPGPEVI---SVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYF 661 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~----~~~~~~s~~~~---~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (861)
..+|+|++|+||||++.. .....+...++ .+++.| +++|+.++|+|||+...+..+++.+ ++..
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L-~~~Gi~v~I~T~~~~~~v~~~l~~l---gl~~----- 89 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCL-LTSGIEVAIITGRKSKLVEDRMTTL---GITH----- 89 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHH-HHCCCEEEEEeCCCcHHHHHHHHHc---CCce-----
Confidence 358999999999999821 01333444443 688888 6789999999999998888877432 2100
Q ss_pred EEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEE
Q 002984 662 IRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAV 741 (861)
Q Consensus 662 i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 741 (861)
.+
T Consensus 90 -------~f----------------------------------------------------------------------- 91 (183)
T PRK09484 90 -------LY----------------------------------------------------------------------- 91 (183)
T ss_pred -------ee-----------------------------------------------------------------------
Confidence 00
Q ss_pred EEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---
Q 002984 742 VKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK--- 818 (861)
Q Consensus 742 v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 818 (861)
.+ .-+|..+++++++++ |++++++++|||+.||++|++.+|. +++++++
T Consensus 92 --~g---------~~~k~~~l~~~~~~~---gl~~~ev~~VGDs~~D~~~a~~aG~--------------~~~v~~~~~~ 143 (183)
T PRK09484 92 --QG---------QSNKLIAFSDLLEKL---AIAPEQVAYIGDDLIDWPVMEKVGL--------------SVAVADAHPL 143 (183)
T ss_pred --cC---------CCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCC--------------eEecCChhHH
Confidence 00 013678999999999 9999999999999999999999996 3445654
Q ss_pred -CcccceecC
Q 002984 819 -PSKAKYYLD 827 (861)
Q Consensus 819 -~s~Aky~l~ 827 (861)
...|+|+++
T Consensus 144 ~~~~a~~v~~ 153 (183)
T PRK09484 144 LLPRADYVTR 153 (183)
T ss_pred HHHhCCEEec
Confidence 346788885
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.3e-08 Score=113.58 Aligned_cols=180 Identities=13% Similarity=0.104 Sum_probs=114.6
Q ss_pred EEecccCCchHHHHhhCCchhHHHHHHHHHHc-CCCeEEEeecCcccccCHHHH-HHHHHHHHHhCCCCCCcEEEEEEec
Q 002984 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDIFKGISLK-LLAMEQLLQQHPGMRGKVVLVQIVN 377 (861)
Q Consensus 300 ~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~~KGi~~~-l~Af~~ll~~~P~~~~~vvLvqi~~ 377 (861)
.++|+|++...+... .. ..++ .+ +++++|++++|....|++... +.|++++.+. +++ ++.++.
T Consensus 153 ~~i~n~v~~~~~~~~----~~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP----VP---RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhccc----ch---hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEECC
Confidence 578999987655311 00 1111 11 467889999998888987654 4788777542 232 333432
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCC
Q 002984 378 PARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGT 457 (861)
Q Consensus 378 p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~ 457 (861)
+++. +++++.+. + .+...++.+. .. ++..+|+.||++|.+| | +.+.+|||+|+
T Consensus 218 ----~~~~-~~l~~~~~----~-------~~l~~~v~~~---~~-~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g--- 270 (348)
T TIGR01133 218 ----KNDL-EKVKNVYQ----E-------LGIEAIVTFI---DE-NMAAAYAAADLVISRA---G-ASTVAELAAAG--- 270 (348)
T ss_pred ----cchH-HHHHHHHh----h-------CCceEEecCc---cc-CHHHHHHhCCEEEECC---C-hhHHHHHHHcC---
Confidence 2222 33333332 2 1223344443 22 7899999999999865 4 68999999994
Q ss_pred CcccccccCCCCCCCCceEEeccCCCCc-------ccC---CCceEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHHhh
Q 002984 458 PIMDEALGRERDSPHTSMLVVSEFIGCS-------PSL---SGAIRVNPWD--IDAVADAMTLAINMRDSEKQLRHEKHY 525 (861)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~-------~~l---~~ai~vnP~d--~~~~A~ai~~aL~m~~~e~~~r~~~~~ 525 (861)
.|+|++.+.|.. +.+ ..|++++|.| +++++++|.++++ +++.++.+.++.+
T Consensus 271 ----------------~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~ 333 (348)
T TIGR01133 271 ----------------VPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLL-DPANLEAMAEAAR 333 (348)
T ss_pred ----------------CCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHc-CHHHHHHHHHHHH
Confidence 457777665532 233 3478898876 9999999999996 5555666677777
Q ss_pred hhhccCCHhHHHH
Q 002984 526 RYVSTHDVAYWAR 538 (861)
Q Consensus 526 ~~v~~~~~~~W~~ 538 (861)
+++..+...++++
T Consensus 334 ~~~~~~~~~~i~~ 346 (348)
T TIGR01133 334 KLAKPDAAKRIAE 346 (348)
T ss_pred hcCCccHHHHHHh
Confidence 8887776666554
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.6e-08 Score=111.86 Aligned_cols=251 Identities=14% Similarity=0.038 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEec--CCCChHHHhcCCch--HHHHHHhhcCCEE
Q 002984 183 ANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHS--PFPSSEIYRTLPVR--DEILRGLLNCDLI 258 (861)
Q Consensus 183 vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~--PfP~~e~f~~lp~r--~~il~~ll~~dli 258 (861)
......+.+.+. +| |+|++|++....++..+..+..++|+....|- .|- +..|+. ...+. -.+|.+
T Consensus 76 ~~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~-----~~~~~~~~r~~~~--~~ad~~ 145 (363)
T cd03786 76 LLIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD-----RGMPDEENRHAID--KLSDLH 145 (363)
T ss_pred HHHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC-----CCCCchHHHHHHH--HHhhhc
Confidence 344444445444 78 89999998777776666666667888765441 110 001111 11111 135655
Q ss_pred eecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccC-CchHHHHhhCCchhHHHHHHHHHHc---CCC
Q 002984 259 GFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGV-HMGRLESVLNLPATATKIKEIEKQF---DGK 334 (861)
Q Consensus 259 gF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~---~~~ 334 (861)
-.-+....+++.+ .|+ ...+|.++++++ |...+..... . ....++.+ .++
T Consensus 146 ~~~s~~~~~~l~~-----~G~---------------~~~kI~vign~v~d~~~~~~~~~-~-----~~~~~~~~~~~~~~ 199 (363)
T cd03786 146 FAPTEEARRNLLQ-----EGE---------------PPERIFVVGNTMIDALLRLLELA-K-----KELILELLGLLPKK 199 (363)
T ss_pred cCCCHHHHHHHHH-----cCC---------------CcccEEEECchHHHHHHHHHHhh-c-----cchhhhhcccCCCC
Confidence 4444444333332 121 223556677764 5433321111 0 01111222 345
Q ss_pred eEEEeecCccc---ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 002984 335 KLILGIDDMDI---FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (861)
Q Consensus 335 ~vil~Vdrld~---~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~p 411 (861)
.+++.++|+.. .||+..+++|++++.+. + +.++..+. ++...++++.+ .+.+. ..+
T Consensus 200 ~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~----~~vi~~~~-----~~~~~~l~~~~----~~~~~------~~~ 258 (363)
T cd03786 200 YILVTLHRVENVDDGEQLEEILEALAELAEE--D----VPVVFPNH-----PRTRPRIREAG----LEFLG------HHP 258 (363)
T ss_pred EEEEEeCCccccCChHHHHHHHHHHHHHHhc--C----CEEEEECC-----CChHHHHHHHH----Hhhcc------CCC
Confidence 67788999875 79999999999887542 2 33554432 22223344333 22211 012
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-CC
Q 002984 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SG 490 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ 490 (861)
.+.+.+.....++..+|+.||++|.+|- | +..|+++|+ .|+|++...+..+++ ..
T Consensus 259 ~v~~~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g-------------------~PvI~~~~~~~~~~~~~~ 314 (363)
T cd03786 259 NVLLISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLG-------------------VPVLNLRDRTERPETVES 314 (363)
T ss_pred CEEEECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcC-------------------CCEEeeCCCCccchhhhe
Confidence 3456666778899999999999999984 4 468999984 457777655645444 44
Q ss_pred ceEeCC-CCHHHHHHHHHHHhcCCH
Q 002984 491 AIRVNP-WDIDAVADAMTLAINMRD 514 (861)
Q Consensus 491 ai~vnP-~d~~~~A~ai~~aL~m~~ 514 (861)
++.+.+ .|.++++++|.++++.+.
T Consensus 315 g~~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 315 GTNVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred eeEEecCCCHHHHHHHHHHHhcCch
Confidence 444433 379999999999998553
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.9e-08 Score=112.02 Aligned_cols=272 Identities=10% Similarity=0.063 Sum_probs=153.6
Q ss_pred HHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhH
Q 002984 187 FADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYA 266 (861)
Q Consensus 187 fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~ 266 (861)
-..++++..+| |+|.++ +....+..+.+++..++|+. +.++-+-. .+ . ++. -.+|.+-..+....
T Consensus 95 ~l~~~l~~~kP--DvVi~~-~p~~~~~~l~~~~~~~iP~~-~v~td~~~------~~--~-w~~--~~~d~~~v~s~~~~ 159 (391)
T PRK13608 95 KLINLLIKEKP--DLILLT-FPTPVMSVLTEQFNINIPVA-TVMTDYRL------HK--N-WIT--PYSTRYYVATKETK 159 (391)
T ss_pred HHHHHHHHhCc--CEEEEC-CcHHHHHHHHHhcCCCCCEE-EEeCCCCc------cc--c-ccc--CCCCEEEECCHHHH
Confidence 34455666788 888886 22223333333444466764 34444411 11 0 111 14788777665544
Q ss_pred HHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CC-CeEEEeecC
Q 002984 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DG-KKLILGIDD 342 (861)
Q Consensus 267 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~-~~vil~Vdr 342 (861)
+.+.+ .|++ ..+|.+.++.|+. .|... .+ ...+++++ .+ +.+++++|+
T Consensus 160 ~~l~~-----~gi~---------------~~ki~v~GiPv~~-~f~~~---~~----~~~~~~~~~l~~~~~~ilv~~G~ 211 (391)
T PRK13608 160 QDFID-----VGID---------------PSTVKVTGIPIDN-KFETP---ID----QKQWLIDNNLDPDKQTILMSAGA 211 (391)
T ss_pred HHHHH-----cCCC---------------HHHEEEECeecCh-Hhccc---cc----HHHHHHHcCCCCCCCEEEEECCC
Confidence 44432 1321 1123334445552 33211 11 12333444 23 456678999
Q ss_pred cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHH
Q 002984 343 MDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRF 422 (861)
Q Consensus 343 ld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~ 422 (861)
+...||+..+++++ ++..|+++ ++.+++ .++ ++.+++.+ ..+ .. +.+.+.|.+ +
T Consensus 212 lg~~k~~~~li~~~---~~~~~~~~----~vvv~G----~~~---~l~~~l~~---~~~----~~---~~v~~~G~~--~ 265 (391)
T PRK13608 212 FGVSKGFDTMITDI---LAKSANAQ----VVMICG----KSK---ELKRSLTA---KFK----SN---ENVLILGYT--K 265 (391)
T ss_pred cccchhHHHHHHHH---HhcCCCce----EEEEcC----CCH---HHHHHHHH---Hhc----cC---CCeEEEecc--c
Confidence 99999999999885 34456554 655553 222 12222222 111 11 123455554 5
Q ss_pred HHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC------CCceEeCC
Q 002984 423 EKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL------SGAIRVNP 496 (861)
Q Consensus 423 el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l------~~ai~vnP 496 (861)
++..+|+.||++|.. +.|++..|||+|+ .|+|++...+..+.- ..+.-+-+
T Consensus 266 ~~~~~~~~aDl~I~k----~gg~tl~EA~a~G-------------------~PvI~~~~~pgqe~~N~~~~~~~G~g~~~ 322 (391)
T PRK13608 266 HMNEWMASSQLMITK----PGGITISEGLARC-------------------IPMIFLNPAPGQELENALYFEEKGFGKIA 322 (391)
T ss_pred hHHHHHHhhhEEEeC----CchHHHHHHHHhC-------------------CCEEECCCCCCcchhHHHHHHhCCcEEEe
Confidence 799999999999863 3588999999994 457776543322211 22233336
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHHHHhh
Q 002984 497 WDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDH 551 (861)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~ 551 (861)
.|.++++++|.++++. ++++..+.++.++....++....++.+++.+...++-+
T Consensus 323 ~~~~~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 323 DTPEEAIKIVASLTNG-NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CCHHHHHHHHHHHhcC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 6999999999999974 45555666677777777888888888877776655433
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.8e-08 Score=106.83 Aligned_cols=65 Identities=18% Similarity=0.174 Sum_probs=54.4
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---CcccceecC--CHh
Q 002984 756 VSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK---PSKAKYYLD--DAT 830 (861)
Q Consensus 756 vsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~Aky~l~--d~~ 830 (861)
..|+.+++.+++++ |++++++++|||+.||++|++.+|. +|++..+ +..|++.++ +.+
T Consensus 247 k~K~~~L~~la~~l---gi~~~qtIaVGDg~NDl~m~~~AGl--------------giA~nAkp~Vk~~Ad~~i~~~~l~ 309 (322)
T PRK11133 247 QYKADTLTRLAQEY---EIPLAQTVAIGDGANDLPMIKAAGL--------------GIAYHAKPKVNEQAQVTIRHADLM 309 (322)
T ss_pred ccHHHHHHHHHHHc---CCChhhEEEEECCHHHHHHHHHCCC--------------eEEeCCCHHHHhhCCEEecCcCHH
Confidence 46999999999999 9999999999999999999999996 5667333 378889886 467
Q ss_pred HHHHHHH
Q 002984 831 DVLKLLQ 837 (861)
Q Consensus 831 eV~~~L~ 837 (861)
+|+.+|.
T Consensus 310 ~~l~~~~ 316 (322)
T PRK11133 310 GVLCILS 316 (322)
T ss_pred HHHHHhc
Confidence 7776664
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.81 E-value=6.8e-08 Score=94.68 Aligned_cols=200 Identities=19% Similarity=0.241 Sum_probs=133.5
Q ss_pred HHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc--cc-CCceEecCcEE
Q 002984 585 AYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP--CE-MLGIAAEHGYF 661 (861)
Q Consensus 585 ~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~--~~-~lgliaenG~~ 661 (861)
++++...-+++||.||||++ ....+++++.+.|++| .+.+.+.++-|-..+.+.+-++. +. .....+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~l--r~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKL--RKKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHH--hhheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 44555567999999999999 7889999999999998 67899999999999888777743 12 23466899987
Q ss_pred EEeCCcceEEecC-Ccc-ChHHHHHHHHHHHHHhhc----CCCceEeeccceeEeee--ccCCc----cchh-----ccH
Q 002984 662 IRWNKTSEWETNH-LGA-DLEWKKIVEPVMRSYTEA----TDGSNIEIKESALVWHH--QDADP----DFGS-----CQA 724 (861)
Q Consensus 662 i~~~~~~~~~~~~-~~~-~~~w~~~v~~i~~~y~~~----~~gs~ie~k~~~l~~~~--~~~d~----~~~~-----~~a 724 (861)
-+..|...-...+ ... +..+++.+.-.+.+..+- .-|.++|-++-.+.+.. +++.. +|.. ..-
T Consensus 80 ~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR 159 (252)
T KOG3189|consen 80 AYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIR 159 (252)
T ss_pred EeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhH
Confidence 7766543211100 000 111233333333343331 24889988776665432 22211 1111 112
Q ss_pred HHHHHHHHHHhcCCCEE-EEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeC----CcchHHHHHHc
Q 002984 725 KELLDHLESVLANEPAV-VKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGD----DRSDEDMFESI 795 (861)
Q Consensus 725 ~el~~~L~~~l~~~~~~-v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~a 795 (861)
+...+.|++.+++.++. .+.|+-.++|.|.|++|-..++.+-.. ..+.+..||| +.||.+.|..-
T Consensus 160 ~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d------gf~~IhFFGDkT~~GGNDyEIf~dp 229 (252)
T KOG3189|consen 160 EKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD------GFDTIHFFGDKTMPGGNDYEIFADP 229 (252)
T ss_pred HHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc------CCceEEEeccccCCCCCcceeeeCC
Confidence 34667788888887754 456778899999999999998887543 3689999999 57999888654
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.7e-08 Score=95.64 Aligned_cols=55 Identities=24% Similarity=0.337 Sum_probs=46.2
Q ss_pred EEEecCCccccCCCC-----CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002984 593 AIFLDYDGTVVPETS-----IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 593 lI~~DlDGTLl~~~~-----~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
+++||+||||.+..+ ....+.+.+.+.|++| ++.|+.++|+||+....+..++..
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~ivS~~~~~~~~~~~~~ 60 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKEL-KEKGIKLALATNKSRREVLELLEE 60 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHH-HHCCCeEEEEeCchHHHHHHHHHH
Confidence 489999999999432 1137889999999999 678999999999999999998854
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=98.77 E-value=8.8e-09 Score=98.50 Aligned_cols=128 Identities=21% Similarity=0.235 Sum_probs=88.8
Q ss_pred CeEEEeecCcccccCHHHHHH-HHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002984 334 KKLILGIDDMDIFKGISLKLL-AMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (861)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~-Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pv 412 (861)
..++++.|++...||+..+++ |++++.+++|+++ |+.+|... + + +.++ . .+.
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~~~-----~--~----l~~~-~-----------~~~ 54 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGNGP-----D--E----LKRL-R-----------RPN 54 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECESS--------H----HCCH-H-----------HCT
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeCCH-----H--H----HHHh-c-----------CCC
Confidence 357899999999999999999 9999999999755 88887522 2 1 2111 0 123
Q ss_pred EEEcCCCCHHHHHHHHHhcccceeccc-ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC---
Q 002984 413 VLIDRPVPRFEKSAYYAVAECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL--- 488 (861)
Q Consensus 413 v~~~~~v~~~el~aly~~ADv~vvtS~-~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--- 488 (861)
+.+.+.+ +|+.++|+.||+++.|+. .+|++...+|||++ |.|+|+|.. |+....
T Consensus 55 v~~~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~-------------------G~pvi~~~~-~~~~~~~~~ 112 (135)
T PF13692_consen 55 VRFHGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAA-------------------GKPVIASDN-GAEGIVEED 112 (135)
T ss_dssp EEEE-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCT-------------------T--EEEEHH-HCHCHS---
T ss_pred EEEcCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHh-------------------CCCEEECCc-chhhheeec
Confidence 4556666 689999999999999984 78999999999999 456888888 656555
Q ss_pred CCceEeCCCCHHHHHHHHHHHhc
Q 002984 489 SGAIRVNPWDIDAVADAMTLAIN 511 (861)
Q Consensus 489 ~~ai~vnP~d~~~~A~ai~~aL~ 511 (861)
+.++.+ +.|.++++++|.++++
T Consensus 113 ~~~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 113 GCGVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp SEEEE--TT-HHHHHHHHHHHHH
T ss_pred CCeEEE-CCCHHHHHHHHHHHhc
Confidence 235666 8899999999999875
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.8e-08 Score=99.10 Aligned_cols=138 Identities=20% Similarity=0.165 Sum_probs=99.1
Q ss_pred ceEEEecCCccccCCCC---C----CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEE
Q 002984 591 RRAIFLDYDGTVVPETS---I----IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIR 663 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~---~----~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~ 663 (861)
.|+++||+||||++-+- . .+..+..--..++.| ++.|+.++|+|+++...+...+..+ ++.
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L-~~~Gi~laIiT~k~~~~~~~~l~~l---gi~-------- 74 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVL-QLCGIDVAIITSKKSGAVRHRAEEL---KIK-------- 74 (169)
T ss_pred CeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHH-HHCCCEEEEEECCCcHHHHHHHHHC---CCc--------
Confidence 79999999999998310 1 123456666788888 6788999999998888887777432 210
Q ss_pred eCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEE
Q 002984 664 WNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVK 743 (861)
Q Consensus 664 ~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~ 743 (861)
.|. .
T Consensus 75 -----~~f------------------------------~----------------------------------------- 78 (169)
T TIGR02726 75 -----RFH------------------------------E----------------------------------------- 78 (169)
T ss_pred -----EEE------------------------------e-----------------------------------------
Confidence 000 0
Q ss_pred EcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----C
Q 002984 744 RGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----P 819 (861)
Q Consensus 744 ~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~ 819 (861)
.++ .|...++.+++++ +++++++++|||+.||++|++.+|. +++++++ +
T Consensus 79 ------~~k----pkp~~~~~~~~~l---~~~~~ev~~iGD~~nDi~~~~~ag~--------------~~am~nA~~~lk 131 (169)
T TIGR02726 79 ------GIK----KKTEPYAQMLEEM---NISDAEVCYVGDDLVDLSMMKRVGL--------------AVAVGDAVADVK 131 (169)
T ss_pred ------cCC----CCHHHHHHHHHHc---CcCHHHEEEECCCHHHHHHHHHCCC--------------eEECcCchHHHH
Confidence 001 3677899999999 9999999999999999999999996 6777775 4
Q ss_pred cccceecCC--Hh-HHHHHHHHHHhhc
Q 002984 820 SKAKYYLDD--AT-DVLKLLQGLATAS 843 (861)
Q Consensus 820 s~Aky~l~d--~~-eV~~~L~~L~~~~ 843 (861)
..|+|++.. .+ .+.++++.+.+..
T Consensus 132 ~~A~~I~~~~~~~g~v~e~~e~il~~~ 158 (169)
T TIGR02726 132 EAAAYVTTARGGHGAVREVAELILKAQ 158 (169)
T ss_pred HhCCEEcCCCCCCCHHHHHHHHHHHhc
Confidence 778888743 23 3566666666543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.3e-07 Score=103.78 Aligned_cols=139 Identities=17% Similarity=0.207 Sum_probs=89.4
Q ss_pred HHHHc---CCCeE-EE-eecCcccccC-HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHH
Q 002984 327 IEKQF---DGKKL-IL-GIDDMDIFKG-ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRI 400 (861)
Q Consensus 327 l~~~~---~~~~v-il-~Vdrld~~KG-i~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~I 400 (861)
+++++ .++++ ++ +-+|....|+ +...++|++.+.+++|+++ +++++. .++..+++++.+ .+
T Consensus 176 ~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~~~~~~~~~----~~- 242 (380)
T PRK00025 176 ARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKRREQIEEAL----AE- 242 (380)
T ss_pred HHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----ChhhHHHHHHHH----hh-
Confidence 44455 24444 33 3457766544 6888999999988888765 666653 122223333322 22
Q ss_pred hhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec-
Q 002984 401 NEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS- 479 (861)
Q Consensus 401 N~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S- 479 (861)
++ +. .+.++. .++..+|+.||++|.+| |.+.+|+|+|+. |+|++
T Consensus 243 ---~~--~~-~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~-------------------PvI~~~ 287 (380)
T PRK00025 243 ---YA--GL-EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLKV-------------------PMVVGY 287 (380)
T ss_pred ---cC--CC-CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCC-------------------CEEEEE
Confidence 10 11 133333 37899999999999998 678889999944 46665
Q ss_pred ----------------cCCCCcccCCC-----ceEeCCCCHHHHHHHHHHHhcCC
Q 002984 480 ----------------EFIGCSPSLSG-----AIRVNPWDIDAVADAMTLAINMR 513 (861)
Q Consensus 480 ----------------e~~G~~~~l~~-----ai~vnP~d~~~~A~ai~~aL~m~ 513 (861)
.+.|..+.+.+ .++++..|.+++++++.+.|+.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~ 342 (380)
T PRK00025 288 KVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADG 342 (380)
T ss_pred ccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCH
Confidence 34454555532 36678889999999999999843
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.5e-07 Score=103.11 Aligned_cols=249 Identities=12% Similarity=0.041 Sum_probs=140.0
Q ss_pred HHHHcCCCCCEEEEeCccccc--HHHHH-Hh-hcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhH
Q 002984 191 VMEVINPDDDCVWVHDYHLMV--LPTFL-RK-RFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYA 266 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~l--lp~~l-r~-~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~ 266 (861)
++..++|+ |+|.+|..-+.. ++..+ ++ +..++|+.+++|-=||..-.. .-..+......+-.||.|..++....
T Consensus 58 ~~~~~~~~-Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~-~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPG-DIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDS-NYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCC-CEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccc-cchhhHHHHHHHHhCCEEEECCHHHH
Confidence 45557774 999999754432 22322 11 112699999999877642110 00012233445557899999988665
Q ss_pred HHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccc
Q 002984 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIF 346 (861)
Q Consensus 267 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~ 346 (861)
+.+.+ .|+. ..++.+.|+..+..... .+....+++.|+++||+...
T Consensus 136 ~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~--------------~~~~~~~~~~i~yaG~l~k~ 181 (333)
T PRK09814 136 DRLVE-----EGLT---------------TDKIIVQGIFDYLNDIE--------------LVKTPSFQKKINFAGNLEKS 181 (333)
T ss_pred HHHHH-----cCCC---------------cCceEeccccccccccc--------------ccccccCCceEEEecChhhc
Confidence 55543 1221 01122233322221000 00112345689999999843
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHH
Q 002984 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (861)
Q Consensus 347 KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~a 426 (861)
.++. +..|++ .|+.+|.. ++.. ...+.+.+.|.++.+|+..
T Consensus 182 ~~l~----------~~~~~~----~l~i~G~g-----~~~~--------------------~~~~~V~f~G~~~~eel~~ 222 (333)
T PRK09814 182 PFLK----------NWSQGI----KLTVFGPN-----PEDL--------------------ENSANISYKGWFDPEELPN 222 (333)
T ss_pred hHHH----------hcCCCC----eEEEECCC-----cccc--------------------ccCCCeEEecCCCHHHHHH
Confidence 3211 124554 37777732 2211 0113457788999999999
Q ss_pred HHHhcccceecccc-----------cCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---Cce
Q 002984 427 YYAVAECCIVNAVR-----------DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAI 492 (861)
Q Consensus 427 ly~~ADv~vvtS~~-----------EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai 492 (861)
+|+. |+.+++.-. -.++--..||||| |-|+|++..++.++.+. .|+
T Consensus 223 ~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~-------------------G~PVI~~~~~~~~~~V~~~~~G~ 282 (333)
T PRK09814 223 ELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAA-------------------GLPVIVWSKAAIADFIVENGLGF 282 (333)
T ss_pred HHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHC-------------------CCCEEECCCccHHHHHHhCCceE
Confidence 9988 665554311 1233336778999 45699999988888882 378
Q ss_pred EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHH
Q 002984 493 RVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539 (861)
Q Consensus 493 ~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~ 539 (861)
.++ +.++++++|... ++++++.+.++.++..........++.
T Consensus 283 ~v~--~~~el~~~l~~~---~~~~~~~m~~n~~~~~~~~~~g~~~~~ 324 (333)
T PRK09814 283 VVD--SLEELPEIIDNI---TEEEYQEMVENVKKISKLLRNGYFTKK 324 (333)
T ss_pred EeC--CHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 887 688999999873 455555555555544433333333333
|
|
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.1e-07 Score=96.57 Aligned_cols=193 Identities=19% Similarity=0.279 Sum_probs=126.5
Q ss_pred HHHHHHHhhcCCCCeEEEECCCChhhHHHHhc-c--cc-CCceEecCcEEEEeCCcceEEecCCcc--ChHHHHHHHHHH
Q 002984 616 VISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA-P--CE-MLGIAAEHGYFIRWNKTSEWETNHLGA--DLEWKKIVEPVM 689 (861)
Q Consensus 616 ~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~-~--~~-~lgliaenG~~i~~~~~~~~~~~~~~~--~~~w~~~v~~i~ 689 (861)
+.+.|++| .+...|.++||-....+++-+. . +. ...+.++||...+..+...|...+... +...++.+.-++
T Consensus 1 M~~~L~~L--~~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKL--RKKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHH--HTTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHH--HhcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 35678888 3579999999999998888773 2 11 345889999999999888886543210 111233333333
Q ss_pred HHHhh----cCCCceEeeccceeEeee--ccCCc----cchh----ccH-HHHHHHHHHHhcCCCEE-EEEcCeEEEEec
Q 002984 690 RSYTE----ATDGSNIEIKESALVWHH--QDADP----DFGS----CQA-KELLDHLESVLANEPAV-VKRGQHIVEVKP 753 (861)
Q Consensus 690 ~~y~~----~~~gs~ie~k~~~l~~~~--~~~d~----~~~~----~~a-~el~~~L~~~l~~~~~~-v~~g~~~vEI~p 753 (861)
.+..+ ..-|.++|.+...+.+.. +.+.. .|.. ... +.+.+.|++.+.+..+. ...|...++|.|
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp 158 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFP 158 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEcccc
Confidence 33332 124899999998887763 22221 1111 111 34677788888877654 456788999999
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCeEEEEeC----CcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCcccceecCCH
Q 002984 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGD----DRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDA 829 (861)
Q Consensus 754 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~Aky~l~d~ 829 (861)
+|++|..++++|.+. ..+++++||| +.||.++|...+. .+.+ +.++
T Consensus 159 ~GwDKty~Lr~l~~~------~~~~I~FfGDkt~pGGNDyei~~~~rt-------------~g~~-----------V~~p 208 (220)
T PF03332_consen 159 KGWDKTYCLRHLEDE------GFDEIHFFGDKTFPGGNDYEIFEDPRT-------------IGHT-----------VTSP 208 (220)
T ss_dssp TT-SGGGGGGGTTTT------T-SEEEEEESS-STTSTTHHHHHSTTS-------------EEEE------------SSH
T ss_pred CCccHHHHHHHHHhc------ccceEEEEehhccCCCCCceeeecCCc-------------cEEE-----------eCCH
Confidence 999999999998653 2799999999 5799999988654 3444 4578
Q ss_pred hHHHHHHHHHH
Q 002984 830 TDVLKLLQGLA 840 (861)
Q Consensus 830 ~eV~~~L~~L~ 840 (861)
++.++.|++|.
T Consensus 209 ~DT~~~l~~l~ 219 (220)
T PF03332_consen 209 EDTIKQLKELF 219 (220)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 88888888775
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.8e-06 Score=100.85 Aligned_cols=180 Identities=13% Similarity=0.102 Sum_probs=118.7
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 002984 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQ--QHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~Af~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~ 410 (861)
+..++..|.|+...||..+.+.+++++++ .+|+. .+.+|..|.....+. .-.++.+.+.+++++ +.+.
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~-~gk~~i~~i~~la~~-------~~~~ 457 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADG-EGKEIIQRIVEFSKR-------PEFR 457 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccc-hHHHHHHHHHHHHhc-------ccCC
Confidence 45688999999999999999999999986 55552 366777775432221 124455666666542 1122
Q ss_pred -cEEEEcCCCCHHHHHHHHHhccccee-ccc-ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCccc
Q 002984 411 -PVVLIDRPVPRFEKSAYYAVAECCIV-NAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS 487 (861)
Q Consensus 411 -pvv~~~~~v~~~el~aly~~ADv~vv-tS~-~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (861)
.|+++. ..+..--..+|.+||+++. ||. .|.-|+.-+-||.- |.|..|-.-|...+
T Consensus 458 ~kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n--------------------GgL~~sv~DG~~~E 516 (601)
T TIGR02094 458 GRIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN--------------------GVLNLSILDGWWGE 516 (601)
T ss_pred CCEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc--------------------CCceeecccCcccc
Confidence 344444 4455555588999999999 777 89998888777773 55677777766555
Q ss_pred C---CCceEeCC------------CCHHHHHHHHHHHh-cC----C----HHHHHH-HHHHhhhhhccCCHhHHHHHHHH
Q 002984 488 L---SGAIRVNP------------WDIDAVADAMTLAI-NM----R----DSEKQL-RHEKHYRYVSTHDVAYWARSFAQ 542 (861)
Q Consensus 488 l---~~ai~vnP------------~d~~~~A~ai~~aL-~m----~----~~e~~~-r~~~~~~~v~~~~~~~W~~~fl~ 542 (861)
. .+|+.+.+ .|.+++-++|.+++ .+ + +.+... +.+.|......+++.+-+++++.
T Consensus 517 ~~~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~ 596 (601)
T TIGR02094 517 GYDGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVD 596 (601)
T ss_pred cCCCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHH
Confidence 4 34788875 89999999998877 21 1 112223 33334443445777777777665
Q ss_pred H
Q 002984 543 D 543 (861)
Q Consensus 543 ~ 543 (861)
.
T Consensus 597 ~ 597 (601)
T TIGR02094 597 K 597 (601)
T ss_pred H
Confidence 3
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.69 E-value=9.2e-08 Score=100.08 Aligned_cols=84 Identities=21% Similarity=0.237 Sum_probs=64.7
Q ss_pred CCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC
Q 002984 737 NEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG 816 (861)
Q Consensus 737 ~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG 816 (861)
..+..+..+.....-+| +...+..+++.+ |.+++++++|||+.+|+.|.+++|. .+++|++|
T Consensus 130 ~~F~~i~g~~~~~~~KP----~P~~l~~~~~~~---~~~~~~~l~VGDs~~Di~aA~~Ag~-----------~~v~v~~g 191 (220)
T COG0546 130 DYFDVIVGGDDVPPPKP----DPEPLLLLLEKL---GLDPEEALMVGDSLNDILAAKAAGV-----------PAVGVTWG 191 (220)
T ss_pred cccceEEcCCCCCCCCc----CHHHHHHHHHHh---CCChhheEEECCCHHHHHHHHHcCC-----------CEEEEECC
Confidence 33334444444444444 678889999999 8888899999999999999999995 25789998
Q ss_pred CC------CcccceecCCHhHHHHHHHH
Q 002984 817 RK------PSKAKYYLDDATDVLKLLQG 838 (861)
Q Consensus 817 ~~------~s~Aky~l~d~~eV~~~L~~ 838 (861)
.. ...|+++++++.++...|..
T Consensus 192 ~~~~~~l~~~~~d~vi~~~~el~~~l~~ 219 (220)
T COG0546 192 YNSREELAQAGADVVIDSLAELLALLAE 219 (220)
T ss_pred CCCCcchhhcCCCEEECCHHHHHHHHhc
Confidence 53 36788999999999887753
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=98.68 E-value=8.2e-07 Score=104.02 Aligned_cols=272 Identities=14% Similarity=0.090 Sum_probs=168.6
Q ss_pred HHHHHHHHHHHHHHH----cCCCCCEEE--EeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCc--hHHHHHH
Q 002984 180 YVSANKIFADKVMEV----INPDDDCVW--VHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPV--RDEILRG 251 (861)
Q Consensus 180 Y~~vN~~fa~~v~~~----~~p~~D~Vw--vhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~--r~~il~~ 251 (861)
|...+..++..+-+. .. ++|++. ++.-|... +....|..++.+..|+ ... |. -+..+..
T Consensus 203 f~~~~eLi~efl~~l~~~~~~-~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~---~~~-----~~~~y~~~l~~ 269 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVK-DDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS---ERN-----RHHTYLDLYES 269 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCC-CCCEEEEEcCchhhhh----HhhcCccceEEEEecc---Ccc-----cccchhhhhhC
Confidence 444455555544333 33 458777 77777766 4445554455556665 111 22 2466667
Q ss_pred hhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc
Q 002984 252 LLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF 331 (861)
Q Consensus 252 ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~ 331 (861)
+-.+|.|-.-|.+-.+........ .. ....|..+|++.=...+ ...++.
T Consensus 270 ~~~~d~iIv~T~~q~~~l~~~~~~----------------~~-~~~~v~~Ip~~~~~~~~--------------~~s~r~ 318 (519)
T TIGR03713 270 LSRADLIIVDREDIERLLEENYRE----------------NY-VEFDISRITPFDTRLRL--------------GQSQQL 318 (519)
T ss_pred hhhcCeEEEcCHHHHHHHHHHhhh----------------cc-cCCcceeeCccceEEec--------------Chhhcc
Confidence 777787666565433322211100 00 11233345554331110 112333
Q ss_pred CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC---
Q 002984 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN--- 408 (861)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~--- 408 (861)
.++.|.+++||+ +.|-+...|+|+.++++++|+.. |...|.. .. .+..+.+.++++++|.+++...
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~---~~---~~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYN---ND---NDITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEec---Cc---hhHHHHHHHHHHHHHhhhchhhhcc
Confidence 567788888899 99999999999999999999976 7666632 11 2345566666677766643211
Q ss_pred ---------c----------ccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCC
Q 002984 409 ---------Y----------EPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERD 469 (861)
Q Consensus 409 ---------~----------~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~ 469 (861)
- ...+.|.+..+..++.+.|.-|.++|.+|..|||+ +.+|||+.+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~G--------------- 451 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAG--------------- 451 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcC---------------
Confidence 0 03677787777889999999999999999999999 999999973
Q ss_pred CCCCceEEeccCCCCcccC---CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCC
Q 002984 470 SPHTSMLVVSEFIGCSPSL---SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHD 532 (861)
Q Consensus 470 ~~~~g~lV~Se~~G~~~~l---~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~ 532 (861)
-|.| .-|.++.+ .+|.+| .|++++++||...|.-+ ..........++....++
T Consensus 452 ----iPqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~~~L~~~-~~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 452 ----IPQI---NKVETDYVEHNKNGYII--DDISELLKALDYYLDNL-KNWNYSLAYSIKLIDDYS 507 (519)
T ss_pred ----CCee---ecCCceeeEcCCCcEEe--CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhh
Confidence 3344 55666666 358888 79999999999999844 233333334444443333
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.5e-07 Score=96.94 Aligned_cols=181 Identities=10% Similarity=0.134 Sum_probs=129.9
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHhCCC--CCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 002984 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPG--MRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~--~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~ 410 (861)
....+|+++.+.|.|+.. .|+-+...+.++|. .-.++.|+++|+ .|+ ++-++.-+.++.++.+++- .
T Consensus 268 r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRn--eeD~ervk~Lkd~a~~L~i-------~ 336 (465)
T KOG1387|consen 268 RENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRN--EEDEERVKSLKDLAEELKI-------P 336 (465)
T ss_pred cceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCC--hhhHHHHHHHHHHHHhcCC-------c
Confidence 357899999999999999 77777778888887 334577887774 333 3334444556666665532 2
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCc--ccC
Q 002984 411 PVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS--PSL 488 (861)
Q Consensus 411 pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~--~~l 488 (861)
.-+.|.-.+|.+++..+|..|-+-|-+-..|-||+.+.||||++ .+.++..+|.. +.+
T Consensus 337 ~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAG--------------------lIpi~h~SgGP~lDIV 396 (465)
T KOG1387|consen 337 KHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAG--------------------LIPIVHNSGGPLLDIV 396 (465)
T ss_pred cceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcC--------------------ceEEEeCCCCCceeee
Confidence 34567779999999999999999999999999999999999983 33333333322 111
Q ss_pred ---C---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHH
Q 002984 489 ---S---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546 (861)
Q Consensus 489 ---~---~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 546 (861)
. .|++. -+.++-|++|.+++.|..+||....+..+..+.++.-...-++|...+..
T Consensus 397 ~~~~G~~tGFla--~t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 397 TPWDGETTGFLA--PTDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred eccCCccceeec--CChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 1 25555 36789999999999999999877777777777666656655666544443
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.8e-08 Score=106.16 Aligned_cols=67 Identities=18% Similarity=0.092 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC--C-----cccceecCCHh
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK--P-----SKAKYYLDDAT 830 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~-----s~Aky~l~d~~ 830 (861)
+...+.++++++ |++++++++|||+.+|+.+.+.+|. .+++|++|.. + ..|.|.++++.
T Consensus 153 ~p~~~~~~~~~l---~~~p~~~l~IGDs~~Di~aA~~aG~-----------~~i~v~~g~~~~~~~~~~~~~~~~i~~~~ 218 (229)
T PRK13226 153 HPLPLLVAAERI---GVAPTDCVYVGDDERDILAARAAGM-----------PSVAALWGYRLHDDDPLAWQADVLVEQPQ 218 (229)
T ss_pred CHHHHHHHHHHh---CCChhhEEEeCCCHHHHHHHHHCCC-----------cEEEEeecCCCCCcChhhcCCCeeeCCHH
Confidence 678899999999 9999999999999999999999997 3577888753 1 34889999999
Q ss_pred HHHHHHHH
Q 002984 831 DVLKLLQG 838 (861)
Q Consensus 831 eV~~~L~~ 838 (861)
++.+.|.+
T Consensus 219 el~~~~~~ 226 (229)
T PRK13226 219 LLWNPATW 226 (229)
T ss_pred HHHHHhcC
Confidence 99887753
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=4.7e-07 Score=97.70 Aligned_cols=71 Identities=25% Similarity=0.343 Sum_probs=60.6
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------CcccceecCCHh
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAKYYLDDAT 830 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Aky~l~d~~ 830 (861)
.|..++.++++++ +++++++++|||+.+|+.+.+.+|. .+++|.+|.. ...|+|.+++..
T Consensus 196 ~k~~~~~~~l~~~---~~~p~~~l~IGDs~~Di~aA~~AG~-----------~~I~v~~g~~~~~~l~~~~ad~~i~~~~ 261 (273)
T PRK13225 196 SKRRALSQLVARE---GWQPAAVMYVGDETRDVEAARQVGL-----------IAVAVTWGFNDRQSLVAACPDWLLETPS 261 (273)
T ss_pred CCHHHHHHHHHHh---CcChhHEEEECCCHHHHHHHHHCCC-----------eEEEEecCCCCHHHHHHCCCCEEECCHH
Confidence 4778999999999 9999999999999999999999997 3567788743 246899999999
Q ss_pred HHHHHHHHHHh
Q 002984 831 DVLKLLQGLAT 841 (861)
Q Consensus 831 eV~~~L~~L~~ 841 (861)
++..++..|..
T Consensus 262 eL~~~~~~~~~ 272 (273)
T PRK13225 262 DLLQAVTQLMR 272 (273)
T ss_pred HHHHHHHHHhc
Confidence 99999887753
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.62 E-value=7.1e-08 Score=91.66 Aligned_cols=68 Identities=22% Similarity=0.260 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecC---CH
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLD---DA 829 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~---d~ 829 (861)
+|-.+.+.|++++ ++.+++|.++||+.||+++|+.+|. ++++.++ ...|.|++. ..
T Consensus 83 dK~~a~~~L~~~~---~l~~e~~ayiGDD~~Dlpvm~~vGl--------------s~a~~dAh~~v~~~a~~Vt~~~GG~ 145 (170)
T COG1778 83 DKLAAFEELLKKL---NLDPEEVAYVGDDLVDLPVMEKVGL--------------SVAVADAHPLLKQRADYVTSKKGGE 145 (170)
T ss_pred hHHHHHHHHHHHh---CCCHHHhhhhcCccccHHHHHHcCC--------------cccccccCHHHHHhhHhhhhccCcc
Confidence 3788899999999 9999999999999999999999996 4445444 367888874 23
Q ss_pred hHHHHHHHHHHh
Q 002984 830 TDVLKLLQGLAT 841 (861)
Q Consensus 830 ~eV~~~L~~L~~ 841 (861)
..|.++.+-+..
T Consensus 146 GAvREv~dlil~ 157 (170)
T COG1778 146 GAVREVCDLILQ 157 (170)
T ss_pred hHHHHHHHHHHH
Confidence 445555554443
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=8e-07 Score=94.56 Aligned_cols=59 Identities=12% Similarity=0.181 Sum_probs=50.6
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCce
Q 002984 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGI 654 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgl 654 (861)
+|+|+||+||||+. .+ .+.+.+.++|+.| ++.|..++++|+|+......+...+..+|+
T Consensus 1 ~~~v~~DlDGtL~~---~~-~~~p~a~~~l~~L-~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 1 IKNVICDIDGVLMH---DN-VAVPGAAEFLHRI-LDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CcEEEEeCCCceEe---CC-eeCccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 57999999999998 44 7889999999999 789999999999999888777766655554
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=98.59 E-value=1e-06 Score=94.50 Aligned_cols=65 Identities=15% Similarity=0.167 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCC-C-------CcccceecCC
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGR-K-------PSKAKYYLDD 828 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~-------~s~Aky~l~d 828 (861)
+....+.+++++ |.+++++++|||+. +|+.+-+.+|.. ++.|..|. . ...++|++++
T Consensus 181 ~p~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~~G~~-----------~i~v~~G~~~~~~~~~~~~~pd~~~~s 246 (257)
T TIGR01458 181 SKTFFLEALRAT---GCEPEEAVMIGDDCRDDVGGAQDCGMR-----------GIQVRTGKYRPSDEEKINVPPDLTCDS 246 (257)
T ss_pred CHHHHHHHHHHh---CCChhhEEEECCCcHHHHHHHHHcCCe-----------EEEECCCCCChHHhcccCCCCCEEECC
Confidence 566888889988 99999999999995 999999999973 35566663 1 1346788999
Q ss_pred HhHHHHHH
Q 002984 829 ATDVLKLL 836 (861)
Q Consensus 829 ~~eV~~~L 836 (861)
..++.++|
T Consensus 247 l~el~~~l 254 (257)
T TIGR01458 247 LPHAVDLI 254 (257)
T ss_pred HHHHHHHH
Confidence 99988765
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.2e-07 Score=95.15 Aligned_cols=58 Identities=22% Similarity=0.276 Sum_probs=47.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC---cccceecCC
Q 002984 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP---SKAKYYLDD 828 (861)
Q Consensus 754 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~---s~Aky~l~d 828 (861)
.+-+|..+++.+++.+ |+++++++++|||.||.+||+.+|. ++++..++ ..|+...+.
T Consensus 141 ~~~~K~~~l~~~~~~~---g~~~~~~~a~gDs~nDlpml~~ag~--------------~ia~n~~~~l~~~a~~~~~~ 201 (212)
T COG0560 141 DGEGKAKALRELAAEL---GIPLEETVAYGDSANDLPMLEAAGL--------------PIAVNPKPKLRALADVRIWP 201 (212)
T ss_pred CcchHHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHhCCC--------------CeEeCcCHHHHHHHHHhcCh
Confidence 3456999999999999 9999999999999999999999997 56776663 444444443
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=1e-07 Score=99.24 Aligned_cols=70 Identities=20% Similarity=0.213 Sum_probs=58.2
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------CcccceecCC
Q 002984 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAKYYLDD 828 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Aky~l~d 828 (861)
+-.|...++++++++ +.+++++++|||+.+|+.+.+.+|.. +++|++|.. ...|+|.+++
T Consensus 137 ~Kp~p~~~~~~~~~~---~~~~~~~~~iGDs~~Di~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~~~~~i~~ 202 (214)
T PRK13288 137 AKPDPEPVLKALELL---GAKPEEALMVGDNHHDILAGKNAGTK-----------TAGVAWTIKGREYLEQYKPDFMLDK 202 (214)
T ss_pred CCCCcHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHhhcCcCEEECC
Confidence 334789999999999 99999999999999999999999973 467778743 2358899999
Q ss_pred HhHHHHHHHH
Q 002984 829 ATDVLKLLQG 838 (861)
Q Consensus 829 ~~eV~~~L~~ 838 (861)
..++.+++..
T Consensus 203 ~~~l~~~i~~ 212 (214)
T PRK13288 203 MSDLLAIVGD 212 (214)
T ss_pred HHHHHHHHhh
Confidence 9999887754
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.9e-07 Score=101.02 Aligned_cols=71 Identities=24% Similarity=0.224 Sum_probs=58.1
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------Ccccceec
Q 002984 753 PQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAKYYL 826 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Aky~l 826 (861)
+.+..|...++.+++++ |++++++++|||+.+|+.+.+.+|.. +++|++|.. ...|.+.+
T Consensus 154 ~~~Kp~p~~~~~~~~~~---g~~~~~~l~IGD~~~Di~aA~~aGi~-----------~i~v~~G~~~~~~l~~~~~~~vi 219 (272)
T PRK13223 154 PQKKPDPAALLFVMKMA---GVPPSQSLFVGDSRSDVLAAKAAGVQ-----------CVALSYGYNHGRPIAEESPALVI 219 (272)
T ss_pred CCCCCCcHHHHHHHHHh---CCChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCchhhhhcCCCEEE
Confidence 44455788999999999 99999999999999999999999973 467777742 24688899
Q ss_pred CCHhHHHHHHH
Q 002984 827 DDATDVLKLLQ 837 (861)
Q Consensus 827 ~d~~eV~~~L~ 837 (861)
+++.++..++.
T Consensus 220 ~~l~el~~~~~ 230 (272)
T PRK13223 220 DDLRALLPGCA 230 (272)
T ss_pred CCHHHHHHHHh
Confidence 99999886655
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.49 E-value=8.1e-07 Score=92.69 Aligned_cols=62 Identities=27% Similarity=0.356 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---CcccceecCC--HhH
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK---PSKAKYYLDD--ATD 831 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~Aky~l~d--~~e 831 (861)
.|+..++.+++++ +++++++++|||+.+|+++++.+|. +++++.. ...|++++.+ ..+
T Consensus 152 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Di~aa~~ag~--------------~i~~~~~~~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 152 YKGKTLLILLRKE---GISPENTVAVGDGANDLSMIKAAGL--------------GIAFNAKPKLQQKADICINKKDLTD 214 (219)
T ss_pred ccHHHHHHHHHHc---CCCHHHEEEEECCHHHHHHHHhCCC--------------eEEeCCCHHHHHhchhccCCCCHHH
Confidence 4899999999999 9999999999999999999999987 3455543 3678888864 466
Q ss_pred HHHH
Q 002984 832 VLKL 835 (861)
Q Consensus 832 V~~~ 835 (861)
++.+
T Consensus 215 ~~~~ 218 (219)
T TIGR00338 215 ILPL 218 (219)
T ss_pred HHhh
Confidence 6554
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.3e-07 Score=99.09 Aligned_cols=67 Identities=21% Similarity=0.226 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------CcccceecCCHhH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAKYYLDDATD 831 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Aky~l~d~~e 831 (861)
|+.+++.+++++ +++++++++|||+.+|+++.+.+|.. ++.|.+|.. ...+.|++++..+
T Consensus 151 ~~~~~~~~~~~~---~~~~~~~i~igD~~~Di~~a~~~g~~-----------~i~v~~g~~~~~~~~~~~~~~~i~~~~~ 216 (226)
T PRK13222 151 DPAPLLLACEKL---GLDPEEMLFVGDSRNDIQAARAAGCP-----------SVGVTYGYNYGEPIALSEPDVVIDHFAE 216 (226)
T ss_pred ChHHHHHHHHHc---CCChhheEEECCCHHHHHHHHHCCCc-----------EEEECcCCCCccchhhcCCCEEECCHHH
Confidence 678999999999 99999999999999999999999973 466776643 2357799999999
Q ss_pred HHHHHHH
Q 002984 832 VLKLLQG 838 (861)
Q Consensus 832 V~~~L~~ 838 (861)
+..+|..
T Consensus 217 l~~~l~~ 223 (226)
T PRK13222 217 LLPLLGL 223 (226)
T ss_pred HHHHHHH
Confidence 9888753
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.3e-06 Score=91.66 Aligned_cols=59 Identities=19% Similarity=0.282 Sum_probs=44.8
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCce
Q 002984 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGI 654 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgl 654 (861)
+++|+||+||||.+ ... +.+.+.++|++| +++|..++++|+|+......++..+..+|+
T Consensus 2 ~~~~~~D~DGtl~~---~~~-~~~ga~e~l~~L-~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~ 60 (279)
T TIGR01452 2 AQGFIFDCDGVLWL---GER-VVPGAPELLDRL-ARAGKAALFVTNNSTKSRAEYALKFARLGF 60 (279)
T ss_pred ccEEEEeCCCceEc---CCe-eCcCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 57999999999998 444 455599999999 789999999999876655554443334444
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.41 E-value=2.6e-05 Score=94.54 Aligned_cols=181 Identities=12% Similarity=0.050 Sum_probs=117.1
Q ss_pred eEEEeecCcccccCHHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc-c
Q 002984 335 KLILGIDDMDIFKGISLKLLAMEQLLQ--QHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE-P 411 (861)
Q Consensus 335 ~vil~Vdrld~~KGi~~~l~Af~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~-p 411 (861)
.+|.++.|+...||..+++..++++++ .+|+ ..+++|..|...-.+. .-.++.+++.+++++ +.+. .
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~-~gK~iIk~i~~~a~~-------p~~~~k 548 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADE-PGKELIQEIVEFSRR-------PEFRGR 548 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccch-HHHHHHHHHHHHHhC-------cCCCCc
Confidence 378899999999999999999999865 3444 2477777775432221 124455555555541 1222 3
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceeccc--ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-
Q 002984 412 VVLIDRPVPRFEKSAYYAVAECCIVNAV--RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL- 488 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~--~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 488 (861)
|+++. ..+..--..+++.||+++.||. .|.-|+.-+-|+. .|+|-+|..-|.-.+.
T Consensus 549 Vvfle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~--------------------NG~LnlSvlDGww~E~~ 607 (778)
T cd04299 549 IVFLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAAL--------------------NGGLNLSVLDGWWDEGY 607 (778)
T ss_pred EEEEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHH--------------------cCCeeeecccCcccccc
Confidence 44444 4555555689999999999999 7877777666666 3778888888876665
Q ss_pred --CCceEeCC------------CCHHHHHHHHHHHhc----CC-----HHHHHHHHH-HhhhhhccCCHhHHHHHHHHHH
Q 002984 489 --SGAIRVNP------------WDIDAVADAMTLAIN----MR-----DSEKQLRHE-KHYRYVSTHDVAYWARSFAQDL 544 (861)
Q Consensus 489 --~~ai~vnP------------~d~~~~A~ai~~aL~----m~-----~~e~~~r~~-~~~~~v~~~~~~~W~~~fl~~l 544 (861)
.+|+.+.+ .|.+++-+.|.+.+- .. +.+...+++ .+......+++.+.+++++..+
T Consensus 608 ~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 608 DGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred CCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 34788877 555666666655442 10 222333333 3444445678888888888777
Q ss_pred HH
Q 002984 545 ER 546 (861)
Q Consensus 545 ~~ 546 (861)
..
T Consensus 688 Y~ 689 (778)
T cd04299 688 YL 689 (778)
T ss_pred HH
Confidence 53
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.6e-06 Score=89.51 Aligned_cols=66 Identities=18% Similarity=0.268 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------CcccceecCCHhH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAKYYLDDATD 831 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Aky~l~d~~e 831 (861)
|...++.+++++ |++++++++|||+.+|+.+.+.+|.. +++|++|.. ...|+|.++++.+
T Consensus 133 ~~~~~~~~~~~~---~~~~~~~l~igD~~~Di~aA~~~Gi~-----------~i~~~~g~~~~~~l~~~~~~~~~~~~~~ 198 (205)
T TIGR01454 133 APDIVREALRLL---DVPPEDAVMVGDAVTDLASARAAGTA-----------TVAALWGEGDAGELLAARPDFLLRKPQS 198 (205)
T ss_pred ChHHHHHHHHHc---CCChhheEEEcCCHHHHHHHHHcCCe-----------EEEEEecCCChhhhhhcCCCeeeCCHHH
Confidence 678899999999 99999999999999999999999973 578888853 3568899999999
Q ss_pred HHHHHH
Q 002984 832 VLKLLQ 837 (861)
Q Consensus 832 V~~~L~ 837 (861)
+..++.
T Consensus 199 l~~~~~ 204 (205)
T TIGR01454 199 LLALCR 204 (205)
T ss_pred HHHHhh
Confidence 887653
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.3e-07 Score=98.11 Aligned_cols=64 Identities=19% Similarity=0.157 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------CcccceecCCHhH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAKYYLDDATD 831 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Aky~l~d~~e 831 (861)
+...+.++++++ |++++++++|||+.+|+.+.+.+|.. +++|.+|.. ...|+|++++..+
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~~~igDs~~d~~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~a~~~i~~~~~ 208 (213)
T TIGR01449 143 HPDPLLLAAERL---GVAPQQMVYVGDSRVDIQAARAAGCP-----------SVLLTYGYRYGEAIDLLPPDVLYDSLNE 208 (213)
T ss_pred ChHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHCCCe-----------EEEEccCCCCCcchhhcCCCeEeCCHHH
Confidence 678999999999 99999999999999999999999973 456766643 2468899999998
Q ss_pred HHHH
Q 002984 832 VLKL 835 (861)
Q Consensus 832 V~~~ 835 (861)
+..+
T Consensus 209 l~~~ 212 (213)
T TIGR01449 209 LPPL 212 (213)
T ss_pred HHhh
Confidence 8764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.37 E-value=3.3e-06 Score=86.53 Aligned_cols=38 Identities=26% Similarity=0.338 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+|+.+++.+++.+ |++++++++|||+.+|++|++.+|.
T Consensus 147 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~D~~~a~~ag~ 184 (201)
T TIGR01491 147 NKGEAVERLKREL---NPSLTETVAVGDSKNDLPMFEVADI 184 (201)
T ss_pred cHHHHHHHHHHHh---CCCHHHEEEEcCCHhHHHHHHhcCC
Confidence 5999999999998 9999999999999999999999997
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.37 E-value=4.7e-06 Score=87.26 Aligned_cols=66 Identities=17% Similarity=0.284 Sum_probs=49.6
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------CcccceecC
Q 002984 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAKYYLD 827 (861)
Q Consensus 754 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Aky~l~ 827 (861)
.+.+|..+++++++++ |. +++++|||+.||+.|.+.++.. +.+++|.. ...|+|+++
T Consensus 152 ~~~~K~~~i~~~~~~~---~~--~~~i~iGDs~~Di~aa~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~ 214 (224)
T PLN02954 152 RSGGKAEAVQHIKKKH---GY--KTMVMIGDGATDLEARKPGGAD------------LFIGYGGVQVREAVAAKADWFVT 214 (224)
T ss_pred CCccHHHHHHHHHHHc---CC--CceEEEeCCHHHHHhhhcCCCC------------EEEecCCCccCHHHHhcCCEEEC
Confidence 3456999999999887 54 6899999999999997776542 34556532 235889999
Q ss_pred CHhHHHHHH
Q 002984 828 DATDVLKLL 836 (861)
Q Consensus 828 d~~eV~~~L 836 (861)
+..++.++|
T Consensus 215 ~~~el~~~~ 223 (224)
T PLN02954 215 DFQDLIEVL 223 (224)
T ss_pred CHHHHHHhh
Confidence 999988764
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=98.37 E-value=3.4e-06 Score=89.98 Aligned_cols=54 Identities=22% Similarity=0.286 Sum_probs=45.3
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECC---CChhhHHHHhccc
Q 002984 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG---RGRSSLSEWLAPC 649 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TG---R~~~~l~~~~~~~ 649 (861)
.|.|+||+||||++ .+..++ .+.++|++| ++.|..|+++|| |+...+...+..+
T Consensus 1 ~~~~~~D~DGtl~~---~~~~i~-~a~~~l~~l-~~~g~~~~~~Tnn~~r~~~~~~~~l~~~ 57 (249)
T TIGR01457 1 YKGYLIDLDGTMYK---GKERIP-EAETFVHEL-QKRDIPYLFVTNNSTRTPESVAEMLASF 57 (249)
T ss_pred CCEEEEeCCCceEc---CCeeCc-CHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHc
Confidence 36899999999999 555554 799999999 799999999995 8888888877543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.35 E-value=6.4e-07 Score=88.48 Aligned_cols=52 Identities=15% Similarity=0.304 Sum_probs=45.8
Q ss_pred EEEecCCccccCCCCCC-----------CCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHH---HHhcc
Q 002984 593 AIFLDYDGTVVPETSII-----------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS---EWLAP 648 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~-----------~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~---~~~~~ 648 (861)
+|++|+||||++ ++ ..+++.+.++++++ +++|+.|+++|||+..... +|+..
T Consensus 1 iVisDIDGTL~~---sd~~~~~~~~~~~~~~~~~~~~a~~~l-~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 1 IVISDIDGTITK---SDVLGHVVPIIGKDWTHPGVAKLYRDI-QNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CEEEecCCCCcc---cccccccccccccCcCCHHHHHHHHHH-HHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 589999999999 55 67899999999999 7999999999999998874 67654
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=98.31 E-value=7.4e-06 Score=90.37 Aligned_cols=60 Identities=18% Similarity=0.199 Sum_probs=48.0
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCce
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGI 654 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgl 654 (861)
++++|+||+||||.. .+ .+.+.+.++|++| ++.|.+++++|+|+......++..+..+|+
T Consensus 27 ~~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~l-r~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 27 SVETFIFDCDGVIWK---GD-KLIEGVPETLDML-RSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred hCCEEEEeCcCCeEe---CC-ccCcCHHHHHHHH-HHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 468999999999998 44 4568889999999 789999999999997666666544444554
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.6e-06 Score=92.39 Aligned_cols=60 Identities=15% Similarity=0.057 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC-----CcccceecCCHhH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK-----PSKAKYYLDDATD 831 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~Aky~l~d~~e 831 (861)
+...+.++++++ |++++++++|||+.+|+.+-+.+|.. +++|.+|.. ...|.+++++..+
T Consensus 166 ~p~~~~~a~~~~---~~~~~~~l~vgDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 166 HPDPYLKALEVL---KVSKDHTFVFEDSVSGIKAGVAAGMP-----------VVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred ChHHHHHHHHHh---CCChhHEEEEcCCHHHHHHHHHCCCE-----------EEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 678899999999 99999999999999999999999973 467777743 2468899998887
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.6e-05 Score=91.65 Aligned_cols=101 Identities=7% Similarity=0.126 Sum_probs=61.8
Q ss_pred HHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC--------CCceE
Q 002984 422 FEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL--------SGAIR 493 (861)
Q Consensus 422 ~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--------~~ai~ 493 (861)
-++..+.+.+|++|+||.+|.+|.+|+|++|. +-|-|.|..+|....+ ..|+.
T Consensus 461 l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~-------------------gVPsITTnLsGFG~~~~~~~~~~~~~GV~ 521 (633)
T PF05693_consen 461 LDYYDFVRGCDLGVFPSYYEPWGYTPLECTAF-------------------GVPSITTNLSGFGCWMQEHIEDPEEYGVY 521 (633)
T ss_dssp S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHT-------------------T--EEEETTBHHHHHHHTTS-HHGGGTEE
T ss_pred CCHHHHhccCceeeeccccccccCChHHHhhc-------------------CCceeeccchhHHHHHHHhhccCcCCcEE
Confidence 36778889999999999999999999999998 5568999999977444 12444
Q ss_pred -eC--CCCH----HHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHH
Q 002984 494 -VN--PWDI----DAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (861)
Q Consensus 494 -vn--P~d~----~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl 541 (861)
|+ -.|. +++|+.|.....|+..+|.....+..+.-..-++.+-..-+.
T Consensus 522 VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~ 576 (633)
T PF05693_consen 522 VVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYE 576 (633)
T ss_dssp EE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 33 2334 455566666678888777655544444333345544443333
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.2e-05 Score=86.78 Aligned_cols=72 Identities=13% Similarity=0.064 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhhcCCCC-CCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------------------
Q 002984 758 KGLVAEKVLVRMFNGGRP-PDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------------------ 818 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------------ 818 (861)
+...+..+++++ |+. ++++++|||+.+|+.+.+.+|. .+++|+.|..
T Consensus 160 ~p~~~~~a~~~l---~~~~~~e~l~IGDs~~Di~aA~~aG~-----------~~i~v~~g~~~~~~~~~~~~~~~~~~~~ 225 (267)
T PRK13478 160 YPWMALKNAIEL---GVYDVAACVKVDDTVPGIEEGLNAGM-----------WTVGVILSGNELGLSEEEYQALSAAELA 225 (267)
T ss_pred ChHHHHHHHHHc---CCCCCcceEEEcCcHHHHHHHHHCCC-----------EEEEEccCcccccCCHHHHHhcCHHHHH
Confidence 577889999999 885 6999999999999999999997 3567777743
Q ss_pred -----------CcccceecCCHhHHHHHHHHHHhhc
Q 002984 819 -----------PSKAKYYLDDATDVLKLLQGLATAS 843 (861)
Q Consensus 819 -----------~s~Aky~l~d~~eV~~~L~~L~~~~ 843 (861)
...|.+.+++..++..+|+.+....
T Consensus 226 ~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~~~ 261 (267)
T PRK13478 226 ARRERARARLRAAGAHYVIDTIADLPAVIADIEARL 261 (267)
T ss_pred HHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHHHH
Confidence 2458899999999999887665543
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.26 E-value=4.1e-06 Score=84.28 Aligned_cols=65 Identities=11% Similarity=0.108 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC------------ccccee
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP------------SKAKYY 825 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------------s~Aky~ 825 (861)
+...+..+++++ +.+++++++|||+.+|+.+.+.+|. .++.|..|... ..++|.
T Consensus 95 ~p~~~~~~~~~l---~~~p~~~i~IGD~~~Di~aA~~aGi-----------~~i~v~~g~~~~~~~~~~~~l~~~~~~~~ 160 (173)
T PRK06769 95 STGMLLQAAEKH---GLDLTQCAVIGDRWTDIVAAAKVNA-----------TTILVRTGAGYDALHTYRDKWAHIEPNYI 160 (173)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCC-----------eEEEEecCCCchhhhhhhcccccCCCcch
Confidence 567788888888 9999999999999999999999997 35677776421 346778
Q ss_pred cCCHhHHHHHH
Q 002984 826 LDDATDVLKLL 836 (861)
Q Consensus 826 l~d~~eV~~~L 836 (861)
++++.++..+|
T Consensus 161 ~~~~~el~~~l 171 (173)
T PRK06769 161 AENFEDAVNWI 171 (173)
T ss_pred hhCHHHHHHHH
Confidence 88888887765
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.5e-06 Score=84.56 Aligned_cols=41 Identities=27% Similarity=0.388 Sum_probs=36.9
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHc
Q 002984 752 KPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESI 795 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a 795 (861)
.+.+.+|+.+++.+++.+ +++++++++|||+.||++|++.|
T Consensus 137 ~~~~~~K~~~l~~~~~~~---~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEES---KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHh---CCCHHHEEEEeCCHHHHHHHhcC
Confidence 366788999999999988 89999999999999999999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=98.20 E-value=8.6e-06 Score=82.49 Aligned_cols=66 Identities=20% Similarity=0.131 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC-----Cccc--ceecCCHh
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK-----PSKA--KYYLDDAT 830 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A--ky~l~d~~ 830 (861)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. ++++..|.. ...+ .+++++..
T Consensus 105 ~p~~~~~~~~~l---~~~~~~~~~VgDs~~Di~~A~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ii~~l~ 170 (181)
T PRK08942 105 KPGMLLSIAERL---NIDLAGSPMVGDSLRDLQAAAAAGVT-----------PVLVRTGKGVTTLAEGAAPGTWVLDSLA 170 (181)
T ss_pred CHHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCchhhhcccCCCceeecCHH
Confidence 567888888888 99999999999999999999999973 356666642 2345 78888888
Q ss_pred HHHHHHH
Q 002984 831 DVLKLLQ 837 (861)
Q Consensus 831 eV~~~L~ 837 (861)
++.++|.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 8887765
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=98.20 E-value=7.3e-06 Score=87.63 Aligned_cols=65 Identities=15% Similarity=0.133 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHhhcCCCC-CCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------------------
Q 002984 758 KGLVAEKVLVRMFNGGRP-PDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------------------ 818 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------------ 818 (861)
+...+..+++++ |+. ++++++|||+.+|+.+-+.+|. .+++|++|..
T Consensus 158 ~p~~~~~a~~~l---~~~~~~~~l~IGDs~~Di~aA~~aGi-----------~~i~v~~g~~~~~~~~~~~~~~~~~~~~ 223 (253)
T TIGR01422 158 APWMALKNAIEL---GVYDVAACVKVGDTVPDIEEGRNAGM-----------WTVGLILSSNELGLSEEEYRALDPAELE 223 (253)
T ss_pred CHHHHHHHHHHc---CCCCchheEEECCcHHHHHHHHHCCC-----------eEEEEecCCcccCCCHHHHHhCCHHHHH
Confidence 677888999998 885 9999999999999999999997 3577887753
Q ss_pred -----------CcccceecCCHhHHHHHH
Q 002984 819 -----------PSKAKYYLDDATDVLKLL 836 (861)
Q Consensus 819 -----------~s~Aky~l~d~~eV~~~L 836 (861)
...|++++++..++..+|
T Consensus 224 ~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 224 ARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 145788888888877654
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=98.20 E-value=7.3e-06 Score=85.52 Aligned_cols=65 Identities=17% Similarity=0.108 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHhhcCCCC-CCeEEEEeCCcchHHHHHHccccCCCCCCCCCCce-EEEEeCCC------CcccceecCCH
Q 002984 758 KGLVAEKVLVRMFNGGRP-PDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEI-FACTVGRK------PSKAKYYLDDA 829 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~-~av~vG~~------~s~Aky~l~d~ 829 (861)
+...+..+++++ |+. ++++++|||+.+|+.+-+.+|.. + ++|..|.. ...|.+++++.
T Consensus 147 ~p~~~~~a~~~~---~~~~~~~~~~igD~~~Di~aa~~aG~~-----------~~i~~~~g~~~~~~~~~~~~~~~i~~~ 212 (220)
T TIGR03351 147 APDLILRAMELT---GVQDVQSVAVAGDTPNDLEAGINAGAG-----------AVVGVLTGAHDAEELSRHPHTHVLDSV 212 (220)
T ss_pred CHHHHHHHHHHc---CCCChhHeEEeCCCHHHHHHHHHCCCC-----------eEEEEecCCCcHHHHhhcCCceeecCH
Confidence 778999999999 887 79999999999999999999984 3 56666642 24577888888
Q ss_pred hHHHHHH
Q 002984 830 TDVLKLL 836 (861)
Q Consensus 830 ~eV~~~L 836 (861)
.++..++
T Consensus 213 ~~l~~~~ 219 (220)
T TIGR03351 213 ADLPALL 219 (220)
T ss_pred HHHHHhh
Confidence 8877654
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=7.7e-06 Score=85.39 Aligned_cols=61 Identities=10% Similarity=-0.039 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---CcccceecCCHhHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK---PSKAKYYLDDATDV 832 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~Aky~l~d~~eV 832 (861)
+......+++++ |++++++++|||+.+|+.+-+.+|.. +++|..|.. ...|++++++..++
T Consensus 140 ~p~~~~~~~~~~---g~~p~~~l~igDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLL---GLAPQECVVVEDAPAGVLSGLAAGCH-----------VIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHc---CCCcccEEEEecchhhhHHHHHCCCE-----------EEEECCCCchhhhccCCEEecchhhe
Confidence 577888889999 99999999999999999999999873 345554432 24577788877765
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=5e-06 Score=87.02 Aligned_cols=63 Identities=11% Similarity=0.058 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC-----cccceecCCHhH
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP-----SKAKYYLDDATD 831 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-----s~Aky~l~d~~e 831 (861)
.+...++.+++++ |++++++++|||+.+|+++.+.+|.. ++.+.-+... ..|.+++.+..+
T Consensus 149 p~~~~~~~~~~~~---~~~~~~~~~igDs~~Di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~~~d 214 (222)
T PRK10826 149 PHPEVYLNCAAKL---GVDPLTCVALEDSFNGMIAAKAARMR-----------SIVVPAPEQQNDPRWALADVKLESLTE 214 (222)
T ss_pred CCHHHHHHHHHHc---CCCHHHeEEEcCChhhHHHHHHcCCE-----------EEEecCCccCchhhhhhhheeccCHHH
Confidence 4677999999999 99999999999999999999999973 2344333221 256777777777
Q ss_pred HH
Q 002984 832 VL 833 (861)
Q Consensus 832 V~ 833 (861)
+.
T Consensus 215 l~ 216 (222)
T PRK10826 215 LT 216 (222)
T ss_pred Hh
Confidence 54
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.12 E-value=9.8e-05 Score=84.00 Aligned_cols=134 Identities=19% Similarity=0.174 Sum_probs=81.8
Q ss_pred CCeEE--EeecCccc-ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCc
Q 002984 333 GKKLI--LGIDDMDI-FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409 (861)
Q Consensus 333 ~~~vi--l~Vdrld~-~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~ 409 (861)
++++| ++.+|..+ .|+++..++|++.+.+++|+++ ++.++.+. .....+ +++.+. ++. +.
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~~~~----~~~~~~----~~~-~~ 252 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRRLQF----EQIKAE----YGP-DL 252 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhHHHH----HHHHHH----hCC-CC
Confidence 45544 45579887 7999999999999999999876 54433221 111122 222222 211 11
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec----------
Q 002984 410 EPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS---------- 479 (861)
Q Consensus 410 ~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S---------- 479 (861)
.+..+.+ +...+|++||++|.+| |.+.+|+++|+.| +|++
T Consensus 253 -~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P-------------------~Vv~yk~~pl~~~~ 302 (385)
T TIGR00215 253 -QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKTP-------------------MVVGYRMKPLTFLI 302 (385)
T ss_pred -cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCCC-------------------EEEEEcCCHHHHHH
Confidence 3434433 3457999999999999 6667799999665 3443
Q ss_pred -------cCCCCcccCCC--c---eEeCCCCHHHHHHHHHHHhcCC
Q 002984 480 -------EFIGCSPSLSG--A---IRVNPWDIDAVADAMTLAINMR 513 (861)
Q Consensus 480 -------e~~G~~~~l~~--a---i~vnP~d~~~~A~ai~~aL~m~ 513 (861)
.+.+.+..+.+ + ++-+--+++.+++++.+.|+.+
T Consensus 303 ~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 303 ARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 13333333321 1 2223346789999999999755
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.001 Score=74.01 Aligned_cols=300 Identities=19% Similarity=0.262 Sum_probs=171.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCEEEEeCcc----cccHHHH--HHhhcCCCeEEEEEecC---------CCChHHHhcCCch
Q 002984 181 VSANKIFADKVMEVINPDDDCVWVHDYH----LMVLPTF--LRKRFNRIKLGFFLHSP---------FPSSEIYRTLPVR 245 (861)
Q Consensus 181 ~~vN~~fa~~v~~~~~p~~D~VwvhDyh----l~llp~~--lr~~~~~~~i~~flH~P---------fP~~e~f~~lp~r 245 (861)
.+.+++|+ .......|++..||+|-=- ...+|-. ||+++|+.++..+.-+| ||.+-+.+-+|..
T Consensus 32 ~r~~eRfg-~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFG-FYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhc-ccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 46777877 1223345667899999655 3445554 89999999999887665 2222222334422
Q ss_pred -HHHHHHh---hcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEE---------------------EEE
Q 002984 246 -DEILRGL---LNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV---------------------YIK 300 (861)
Q Consensus 246 -~~il~~l---l~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~---------------------~i~ 300 (861)
.-..+.. ...|+.-|---+.=-|++..|.+. |+. .+-.++|-. ..-
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p--------~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li 181 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIP--------LVLVNARLSDRSFARYAKLKFLARLLFKNIDLI 181 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCC--------EEEEeeeechhhhHHHHHHHHHHHHHHHhccee
Confidence 1122222 234554444444444555555332 111 111122110 111
Q ss_pred EecccCCchHHHHhh---------------CCchhHHHHHHHHHHcCC-CeEEEeecCcccccCHHHHHHHHHHHHHhCC
Q 002984 301 ILPVGVHMGRLESVL---------------NLPATATKIKEIEKQFDG-KKLILGIDDMDIFKGISLKLLAMEQLLQQHP 364 (861)
Q Consensus 301 v~p~GId~~~~~~~~---------------~~~~~~~~~~~l~~~~~~-~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P 364 (861)
+.-.-.|.++|.+.. ..|........+|.++++ +++++..+.- ..--...+.++..+++++|
T Consensus 182 ~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaSTH--~GEeei~l~~~~~l~~~~~ 259 (419)
T COG1519 182 LAQSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAASTH--EGEEEIILDAHQALKKQFP 259 (419)
T ss_pred eecCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecCC--CchHHHHHHHHHHHHhhCC
Confidence 112223333333221 122344566778888877 8999999883 2223347889999999999
Q ss_pred CCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCC-------CcccEEEEcCCCCHHHHHHHHHhcccceec
Q 002984 365 GMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSP-------NYEPVVLIDRPVPRFEKSAYYAVAECCIVN 437 (861)
Q Consensus 365 ~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~-------~~~pvv~~~~~v~~~el~aly~~ADv~vvt 437 (861)
+.. || +. | +.++ =-+.+++++++.+-+++.- ..++|++.+ +.-|+..||++||++.|-
T Consensus 260 ~~l----lI-lV-P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~D---tmGEL~l~y~~adiAFVG 324 (419)
T COG1519 260 NLL----LI-LV-P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGD---TMGELGLLYGIADIAFVG 324 (419)
T ss_pred Cce----EE-Ee-c---CChh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEe---cHhHHHHHHhhccEEEEC
Confidence 864 33 33 3 3333 3456777787777666431 222444444 367999999999998765
Q ss_pred cc---ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec----cCCCCcccC---CCceEeCCCCHHHHHHHHH
Q 002984 438 AV---RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS----EFIGCSPSL---SGAIRVNPWDIDAVADAMT 507 (861)
Q Consensus 438 S~---~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S----e~~G~~~~l---~~ai~vnP~d~~~~A~ai~ 507 (861)
-. .-|-| ++|+.+|+ .|+|.. .|.-+.+.| ++++.|+. .+.+++++.
T Consensus 325 GSlv~~GGHN--~LEpa~~~-------------------~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v~ 381 (419)
T COG1519 325 GSLVPIGGHN--PLEPAAFG-------------------TPVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAVE 381 (419)
T ss_pred CcccCCCCCC--hhhHHHcC-------------------CCEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHHH
Confidence 43 34555 67999983 345543 344444444 34677765 777777777
Q ss_pred HHhcCCHHHHHHHHHHhhhhhccC
Q 002984 508 LAINMRDSEKQLRHEKHYRYVSTH 531 (861)
Q Consensus 508 ~aL~m~~~e~~~r~~~~~~~v~~~ 531 (861)
..++ ++++++.+.++....+..+
T Consensus 382 ~l~~-~~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 382 LLLA-DEDKREAYGRAGLEFLAQN 404 (419)
T ss_pred HhcC-CHHHHHHHHHHHHHHHHHh
Confidence 7776 4677777777777766555
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.3e-05 Score=79.03 Aligned_cols=63 Identities=14% Similarity=0.039 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC-----cccceecCCHhHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP-----SKAKYYLDDATDV 832 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-----s~Aky~l~d~~eV 832 (861)
+...+..+++++ |++++++++|||+.+|+...+.+|.. .++.|..|... ..|+++++++.++
T Consensus 108 ~p~~~~~a~~~~---~~~~~~~v~VGDs~~Di~aA~~aG~~----------~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 108 KPGMLLQARKEL---HIDMAQSYMVGDKLEDMQAGVAAKVK----------TNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CHHHHHHHHHHc---CcChhhEEEEcCCHHHHHHHHHCCCc----------EEEEEecCCcccccccccCCEEeccHHHh
Confidence 677889999999 99999999999999999999999973 11466777532 3488999988887
Q ss_pred H
Q 002984 833 L 833 (861)
Q Consensus 833 ~ 833 (861)
.
T Consensus 175 ~ 175 (176)
T TIGR00213 175 P 175 (176)
T ss_pred h
Confidence 5
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.4e-05 Score=85.71 Aligned_cols=73 Identities=16% Similarity=0.152 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecCCHhHHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLDDATDVL 833 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~d~~eV~ 833 (861)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. +++|. |.. ...|++++++..++.
T Consensus 167 ~Pe~~~~a~~~l---~~~p~~~l~IgDs~~Di~aA~~aG~~-----------~i~v~-g~~~~~~l~~ad~vi~~~~el~ 231 (260)
T PLN03243 167 DPEMFMYAAERL---GFIPERCIVFGNSNSSVEAAHDGCMK-----------CVAVA-GKHPVYELSAGDLVVRRLDDLS 231 (260)
T ss_pred CHHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHcCCE-----------EEEEe-cCCchhhhccCCEEeCCHHHHH
Confidence 678899999999 99999999999999999999999973 34554 432 246788999998864
Q ss_pred -HHHHHHHhhcCC
Q 002984 834 -KLLQGLATASSS 845 (861)
Q Consensus 834 -~~L~~L~~~~~~ 845 (861)
..++.|+....+
T Consensus 232 ~~~~~~~~~~~~~ 244 (260)
T PLN03243 232 VVDLKNLSDLDSP 244 (260)
T ss_pred HHHHhhhhccCCc
Confidence 445556554443
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.06 E-value=5.2e-06 Score=90.41 Aligned_cols=61 Identities=15% Similarity=0.040 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccceecCCHhHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDDATDV 832 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d~~eV 832 (861)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. +++|..|... ..|++++++..++
T Consensus 204 ~p~~~~~a~~~~---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~ad~vi~~~~~l 268 (286)
T PLN02779 204 DPDIYNLAAETL---GVDPSRCVVVEDSVIGLQAAKAAGMR-----------CIVTKSSYTADEDFSGADAVFDCLGDV 268 (286)
T ss_pred CHHHHHHHHHHh---CcChHHEEEEeCCHHhHHHHHHcCCE-----------EEEEccCCccccccCCCcEEECChhhc
Confidence 577899999999 99999999999999999999999973 4566666431 3588888887765
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.2e-05 Score=89.72 Aligned_cols=89 Identities=12% Similarity=0.085 Sum_probs=65.3
Q ss_pred CCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC
Q 002984 738 EPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR 817 (861)
Q Consensus 738 ~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~ 817 (861)
++..++.+.....-+| +......+++.+ |+.++++++|||+.+|+.+.+.+|.. +++|+.+.
T Consensus 258 yFd~Iv~sddv~~~KP----~Peifl~A~~~l---gl~Peecl~IGDS~~DIeAAk~AGm~-----------~IgV~~~~ 319 (381)
T PLN02575 258 FFSVIVAAEDVYRGKP----DPEMFIYAAQLL---NFIPERCIVFGNSNQTVEAAHDARMK-----------CVAVASKH 319 (381)
T ss_pred HceEEEecCcCCCCCC----CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCC
Confidence 3444555543322233 778999999999 99999999999999999999999973 45555443
Q ss_pred C---CcccceecCCHhHH-HHHHHHHHhhcC
Q 002984 818 K---PSKAKYYLDDATDV-LKLLQGLATASS 844 (861)
Q Consensus 818 ~---~s~Aky~l~d~~eV-~~~L~~L~~~~~ 844 (861)
. ...|++++++.+++ ...|+.|...-.
T Consensus 320 ~~~~l~~Ad~iI~s~~EL~~~~l~~l~~~~~ 350 (381)
T PLN02575 320 PIYELGAADLVVRRLDELSIVDLKNLADIES 350 (381)
T ss_pred ChhHhcCCCEEECCHHHHHHHHHhhhhhcCc
Confidence 2 23588899999998 677788877553
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=98.00 E-value=2.2e-05 Score=75.07 Aligned_cols=46 Identities=28% Similarity=0.423 Sum_probs=37.2
Q ss_pred eEEEecCCccccCCCC-----CCCCCCHHHHHHHHHhhcCCCCeEEEECCCC
Q 002984 592 RAIFLDYDGTVVPETS-----IIKSPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (861)
Q Consensus 592 klI~~DlDGTLl~~~~-----~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~ 638 (861)
|+++||+||||++... ....+.+.+.++|+.| ++.|+.++|+|+++
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L-~~~g~~l~i~Sn~~ 51 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAEL-KEAGYKVVIVTNQS 51 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHH-HHCCCEEEEEECCc
Confidence 6899999999996210 1245678999999999 78999999999876
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.4e-05 Score=83.46 Aligned_cols=61 Identities=16% Similarity=0.213 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCCCC-------cccceecCCH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGRKP-------SKAKYYLDDA 829 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-------s~Aky~l~d~ 829 (861)
+....+.+++++ |++++++++|||+. +|+.+.+.+|.. ++.|..|... ..+.+.+++.
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~igDs~~~di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~~~~i~~~ 217 (221)
T TIGR02253 152 HPKIFYAALKRL---GVKPEEAVMVGDRLDKDIKGAKNLGMK-----------TVWINQGKSSKMEDDVYPYPDYEISSL 217 (221)
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCChHHHHHHHHHCCCE-----------EEEECCCCCcccccccccCCCeeeCcH
Confidence 667899999999 99999999999997 999999999973 2344444321 2456777777
Q ss_pred hHH
Q 002984 830 TDV 832 (861)
Q Consensus 830 ~eV 832 (861)
.++
T Consensus 218 ~el 220 (221)
T TIGR02253 218 REL 220 (221)
T ss_pred Hhh
Confidence 654
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=4.4e-05 Score=78.68 Aligned_cols=54 Identities=11% Similarity=0.135 Sum_probs=39.9
Q ss_pred CCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccce-ecCCHhHHHHHHHHHHh
Q 002984 774 RPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKY-YLDDATDVLKLLQGLAT 841 (861)
Q Consensus 774 i~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky-~l~d~~eV~~~L~~L~~ 841 (861)
..++++++|||+.||++|.+++|. +|.++... ..+.+ .+++..++.+.|.....
T Consensus 142 ~~~~~~v~iGDs~~D~~~~~aa~~--------------~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 142 SLGYRVIAAGDSYNDTTMLGEADA--------------GILFRPPANVIAEFPQFPAVHTYDELLAAIDKASA 200 (205)
T ss_pred HhCCeEEEEeCCHHHHHHHHhCCC--------------CEEECCCHHHHHhCCcccccCCHHHHHHHHHHHHh
Confidence 345789999999999999999986 34455432 24454 68899999888776543
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.97 E-value=9.5e-06 Score=76.57 Aligned_cols=51 Identities=20% Similarity=0.256 Sum_probs=41.7
Q ss_pred eEEEecCCccccCCCC---CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHH
Q 002984 592 RAIFLDYDGTVVPETS---IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS 643 (861)
Q Consensus 592 klI~~DlDGTLl~~~~---~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~ 643 (861)
|+|++|+||||+.... ....+.++++++|+++ +++|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l-~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHY-KALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHH-HHCCCEEEEECCCCchhhh
Confidence 7999999999997321 1134779999999998 6899999999999987654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00012 Score=76.59 Aligned_cols=65 Identities=20% Similarity=0.198 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC------CCcccceecCCH
Q 002984 756 VSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR------KPSKAKYYLDDA 829 (861)
Q Consensus 756 vsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~------~~s~Aky~l~d~ 829 (861)
..|..+++. + +..++++++|||+.||+.|.+.+|.. ++ -+. ....+.+.+++.
T Consensus 147 ~~K~~~l~~----~---~~~~~~~i~iGDs~~Di~aa~~Ag~~------------~a--~~~l~~~~~~~~~~~~~~~~f 205 (219)
T PRK09552 147 CCKPSLIRK----L---SDTNDFHIVIGDSITDLEAAKQADKV------------FA--RDFLITKCEELGIPYTPFETF 205 (219)
T ss_pred CchHHHHHH----h---ccCCCCEEEEeCCHHHHHHHHHCCcc------------ee--HHHHHHHHHHcCCCccccCCH
Confidence 457766554 4 66788999999999999999999862 22 111 123455567899
Q ss_pred hHHHHHHHHHHh
Q 002984 830 TDVLKLLQGLAT 841 (861)
Q Consensus 830 ~eV~~~L~~L~~ 841 (861)
.+|.+.|+.+-.
T Consensus 206 ~ei~~~l~~~~~ 217 (219)
T PRK09552 206 HDVQTELKHLLE 217 (219)
T ss_pred HHHHHHHHHHhc
Confidence 999999887654
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.95 E-value=3e-05 Score=79.68 Aligned_cols=42 Identities=17% Similarity=0.090 Sum_probs=37.8
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002984 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 754 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
.+-.|...++.++++. +++++.++++|||.+|++|++.+|..
T Consensus 152 ~g~~K~~~l~~~~~~~---~~~~~~~~~~gDs~~D~~~~~~a~~~ 193 (202)
T TIGR01490 152 KGEGKVHALAELLAEE---QIDLKDSYAYGDSISDLPLLSLVGHP 193 (202)
T ss_pred CChHHHHHHHHHHHHc---CCCHHHcEeeeCCcccHHHHHhCCCc
Confidence 4567999999999988 89999999999999999999999973
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=97.92 E-value=7.3e-05 Score=77.15 Aligned_cols=64 Identities=11% Similarity=0.063 Sum_probs=45.9
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCc---ccc-e-ecCCH
Q 002984 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPS---KAK-Y-YLDDA 829 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s---~Ak-y-~l~d~ 829 (861)
+-.|...++.+ +.. +. +++++||+.||++|++.+|. +|++..++. .|+ + .+.+.
T Consensus 130 ~~~K~~~l~~l-~~~---~~---~~v~vGDs~nDl~ml~~Ag~--------------~ia~~ak~~~~~~~~~~~~~~~~ 188 (203)
T TIGR02137 130 KDPKRQSVIAF-KSL---YY---RVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAVHTY 188 (203)
T ss_pred cchHHHHHHHH-Hhh---CC---CEEEEeCCHHHHHHHHhCCC--------------CEEecCCHHHHHhCCCCCcccCH
Confidence 34688888887 444 43 79999999999999999996 577776652 222 2 34567
Q ss_pred hHHHHHHHHH
Q 002984 830 TDVLKLLQGL 839 (861)
Q Consensus 830 ~eV~~~L~~L 839 (861)
++++..+..-
T Consensus 189 ~~~~~~~~~~ 198 (203)
T TIGR02137 189 EDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHH
Confidence 7777777654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.90 E-value=3e-05 Score=90.33 Aligned_cols=67 Identities=18% Similarity=0.204 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecCCHhHH
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLDDATDV 832 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~d~~eV 832 (861)
.|...+..+++++ +++++++|||+.+|+.+.+.+|.. +++|..|.. ...|.|.+++..++
T Consensus 386 ~kP~~~~~al~~l-----~~~~~v~VGDs~~Di~aAk~AG~~-----------~I~v~~~~~~~~~~~~~d~~i~~l~el 449 (459)
T PRK06698 386 NKSDLVKSILNKY-----DIKEAAVVGDRLSDINAAKDNGLI-----------AIGCNFDFAQEDELAQADIVIDDLLEL 449 (459)
T ss_pred CCcHHHHHHHHhc-----CcceEEEEeCCHHHHHHHHHCCCe-----------EEEEeCCCCcccccCCCCEEeCCHHHH
Confidence 3667788888765 468999999999999999999973 456666642 24588999999999
Q ss_pred HHHHHHH
Q 002984 833 LKLLQGL 839 (861)
Q Consensus 833 ~~~L~~L 839 (861)
.+++...
T Consensus 450 ~~~l~~~ 456 (459)
T PRK06698 450 KGILSTV 456 (459)
T ss_pred HHHHHHH
Confidence 8887553
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=97.88 E-value=1.6e-05 Score=70.97 Aligned_cols=87 Identities=15% Similarity=0.207 Sum_probs=70.1
Q ss_pred cceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHH
Q 002984 433 CCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLA 509 (861)
Q Consensus 433 v~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~a 509 (861)
+++.|+..+|+++..+|+||| |+++|.+...++...+. .++.++ |++++++++..+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~-------------------G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~l 59 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC-------------------GTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYL 59 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC-------------------CCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHH
Confidence 467788889999999999999 45566666667777773 367777 999999999999
Q ss_pred hcCCHHHHHHHHHHhhhhhc-cCCHhHHHHHHH
Q 002984 510 INMRDSEKQLRHEKHYRYVS-THDVAYWARSFA 541 (861)
Q Consensus 510 L~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~fl 541 (861)
++ .+++++...++.+++|. .|++.+-++.|+
T Consensus 60 l~-~~~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 60 LE-NPEERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 98 55677777888888887 688888888776
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=97.87 E-value=6.3e-05 Score=77.11 Aligned_cols=60 Identities=17% Similarity=0.098 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHc--cccCCCCCCCCCCceEEEEeCCCC--cccceecCCHhHHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESI--LSTVSGPSLPVPPEIFACTVGRKP--SKAKYYLDDATDVL 833 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a--g~~~~~~~~~~~~~~~av~vG~~~--s~Aky~l~d~~eV~ 833 (861)
|...+..+++++ | ++.+++|||+.+|+...+.+ |. .++.|.+|+.+ ..+.|.+++..|+.
T Consensus 132 kp~~~~~a~~~~---~--~~~~v~vgDs~~di~aA~~a~~Gi-----------~~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 132 KEKLFIKAKEKY---G--DRVVCFVDDLAHNLDAAHEALSQL-----------PVIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cHHHHHHHHHHh---C--CCcEEEeCCCHHHHHHHHHHHcCC-----------cEEEecchhhccccchhhhhccHHHHh
Confidence 678999999998 7 78899999999999999998 87 35677777642 25557777777664
|
2 hypothetical protein; Provisional |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00012 Score=76.98 Aligned_cols=30 Identities=23% Similarity=0.273 Sum_probs=25.5
Q ss_pred cCCHHHHHHHHHhccceEEEecCCccccCC
Q 002984 576 RLSIDHIVSAYRKTERRAIFLDYDGTVVPE 605 (861)
Q Consensus 576 ~l~~~~~~~~y~~s~~klI~~DlDGTLl~~ 605 (861)
=.++++|.+.....+.-.|+||+||||++.
T Consensus 48 ~~~~~~~~~~~~~~~p~aViFDlDgTLlDS 77 (237)
T TIGR01672 48 WISVAQIENSLEGRPPIAVSFDIDDTVLFS 77 (237)
T ss_pred EEEHHHHHHhcCCCCCeEEEEeCCCccccC
Confidence 367899998888777669999999999994
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=9.1e-05 Score=77.76 Aligned_cols=69 Identities=13% Similarity=0.038 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC--cccceecCCHhHHHHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP--SKAKYYLDDATDVLKL 835 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~--s~Aky~l~d~~eV~~~ 835 (861)
+....+++++++ |++++++++|||+.+|+...+.+|.. .+++|+.+... ..+.....+.+++.++
T Consensus 151 ~p~~~~~~~~~~---~~~p~~~l~igDs~~di~aA~~aG~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 217 (224)
T PRK14988 151 DQRLWQAVAEHT---GLKAERTLFIDDSEPILDAAAQFGIR----------YCLGVTNPDSGIAEKQYQRHPSLNDYRRL 217 (224)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCCe----------EEEEEeCCCCCccchhccCCCcHHHHHHH
Confidence 578899999999 99999999999999999999999873 12445555432 3444455677777777
Q ss_pred HHHH
Q 002984 836 LQGL 839 (861)
Q Consensus 836 L~~L 839 (861)
|+.|
T Consensus 218 ~~~l 221 (224)
T PRK14988 218 IPSL 221 (224)
T ss_pred hhhh
Confidence 7765
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=97.81 E-value=7.5e-05 Score=71.17 Aligned_cols=54 Identities=20% Similarity=0.174 Sum_probs=42.1
Q ss_pred eEEEecCCccccCCCC--CCC-------CCCHHHHHHHHHhhcCCCCeEEEECCC-ChhhHHHHh
Q 002984 592 RAIFLDYDGTVVPETS--IIK-------SPGPEVISVLKTLCSDPNNTVFIVSGR-GRSSLSEWL 646 (861)
Q Consensus 592 klI~~DlDGTLl~~~~--~~~-------~~s~~~~~~L~~L~~~~g~~v~I~TGR-~~~~l~~~~ 646 (861)
|+|++|+||||++... ... .+-+.+.+.|+.| ++.|+.++|+|++ ........+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L-k~~g~~l~i~Sn~~~~~~~~~~l 64 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTL-KKNGFLLALASYNDDPHVAYELL 64 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHH-HHCCeEEEEEeCCCCHHHHHHHH
Confidence 6899999999999421 111 2467999999999 7899999999999 666665555
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.81 E-value=3.6e-05 Score=82.08 Aligned_cols=56 Identities=16% Similarity=0.227 Sum_probs=48.9
Q ss_pred cceEEEecCCccccCCCCCCCCC---CHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSP---GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~---s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
..++|+|||||||++ ..+.+ ++.+.++|++| ++.|+.++|+|++++..+...++.+
T Consensus 125 ~~kvIvFDLDgTLi~---~~~~v~irdPgV~EaL~~L-kekGikLaIaTS~~Re~v~~~L~~l 183 (301)
T TIGR01684 125 PPHVVVFDLDSTLIT---DEEPVRIRDPRIYDSLTEL-KKRGCILVLWSYGDRDHVVESMRKV 183 (301)
T ss_pred cceEEEEecCCCCcC---CCCccccCCHHHHHHHHHH-HHCCCEEEEEECCCHHHHHHHHHHc
Confidence 468999999999999 66554 69999999999 8999999999999999888877553
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00018 Score=70.20 Aligned_cols=37 Identities=22% Similarity=0.143 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
|...++.+++.+ |++++++++|||+..|+.+.+.+|.
T Consensus 103 ~~~~~~~~~~~~---~~~~~e~i~IGDs~~Di~~A~~~Gi 139 (147)
T TIGR01656 103 KPGLILEALKRL---GVDASRSLVVGDRLRDLQAARNAGL 139 (147)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHCCC
Confidence 777899999999 9999999999999999999999987
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00023 Score=71.10 Aligned_cols=48 Identities=23% Similarity=0.325 Sum_probs=36.6
Q ss_pred cceEEEecCCccccCCCCCCC---------CCCHHHHHHHHHhhcCCCCeEEEECCCC
Q 002984 590 ERRAIFLDYDGTVVPETSIIK---------SPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~---------~~s~~~~~~L~~L~~~~g~~v~I~TGR~ 638 (861)
+.|+++||+||||+...+... .+-+.+.++|++| ++.|..++|+|..+
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-k~~G~~l~I~TN~~ 68 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQEL-DDEGYKIVIFTNQS 68 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHH-HHCCCEEEEEeCCc
Confidence 468999999999998322110 1347789999999 78999999999743
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=4.4e-05 Score=79.89 Aligned_cols=66 Identities=20% Similarity=0.136 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHhhcCCCC-CCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCC-C---CcccceecCCHhH
Q 002984 758 KGLVAEKVLVRMFNGGRP-PDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGR-K---PSKAKYYLDDATD 831 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~-~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~---~s~Aky~l~d~~e 831 (861)
+......+++++ |+. ++++++|||+. +|+...+.+|.. ++.+..+. . ...++|.+++..+
T Consensus 152 ~p~~~~~~~~~~---~~~~~~~~~~vgD~~~~Di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~i~~~~e 217 (224)
T PRK09449 152 DVAIFDYALEQM---GNPDRSRVLMVGDNLHSDILGGINAGID-----------TCWLNAHGREQPEGIAPTYQVSSLSE 217 (224)
T ss_pred CHHHHHHHHHHc---CCCCcccEEEEcCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCeEEECCHHH
Confidence 567889999998 875 48999999997 799999999973 23333222 1 1357888999999
Q ss_pred HHHHHH
Q 002984 832 VLKLLQ 837 (861)
Q Consensus 832 V~~~L~ 837 (861)
+.++|+
T Consensus 218 l~~~l~ 223 (224)
T PRK09449 218 LEQLLC 223 (224)
T ss_pred HHHHHh
Confidence 988765
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=97.65 E-value=6.5e-05 Score=85.16 Aligned_cols=62 Identities=13% Similarity=0.026 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecCCHhHHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLDDATDVL 833 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~d~~eV~ 833 (861)
+......+++++ |++++++++|||+.+|+.+.+.+|.. +++|+.|.. ...|.+.+++..++.
T Consensus 152 ~p~~~~~a~~~l---gv~p~~~l~VGDs~~Di~aA~~aGi~-----------~I~v~~g~~~~~~~~~ad~~i~sl~el~ 217 (382)
T PLN02940 152 SPDIFLEAAKRL---NVEPSNCLVIEDSLPGVMAGKAAGME-----------VIAVPSIPKQTHLYSSADEVINSLLDLQ 217 (382)
T ss_pred CHHHHHHHHHHc---CCChhHEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCcchhhccCccEEeCCHhHcC
Confidence 678999999999 99999999999999999999999973 456666542 246777888877754
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00041 Score=76.09 Aligned_cols=56 Identities=23% Similarity=0.408 Sum_probs=46.6
Q ss_pred ceEEEecCCccccCCCCC---------CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhc
Q 002984 591 RRAIFLDYDGTVVPETSI---------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~---------~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~ 647 (861)
.+++++|+||||...... +..+.+.+.+.|++| ++.|..++++|||+.......+.
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~i~T~r~~~~~~~~l~ 222 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMY-KAAGYEIIVVSGRDGVCEEDTVE 222 (300)
T ss_pred CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHH-HhCCCEEEEEeCCChhhHHHHHH
Confidence 579999999999983321 346789999999999 68899999999999988877764
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00039 Score=79.95 Aligned_cols=121 Identities=10% Similarity=0.091 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002984 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (861)
Q Consensus 350 ~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 429 (861)
...|+|++.+.++.|++. |=+ |.++- +..++.++ . +| ..++.+.+- ....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~te--------~s~kL~~L-~----~y-----~nvvly~~~-~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALTE--------MSSKLMSL-D----KY-----DNVKLYPNI-TTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecCc--------ccHHHHHH-H----hc-----CCcEEECCc-ChHHHHHHHH
Confidence 899999999999999987 544 54331 11233333 1 12 356666653 4467889999
Q ss_pred hcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec-c-CCCCcccCCCceEeCCCCHHHHHHHHH
Q 002984 430 VAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-E-FIGCSPSLSGAIRVNPWDIDAVADAMT 507 (861)
Q Consensus 430 ~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e-~~G~~~~l~~ai~vnP~d~~~~A~ai~ 507 (861)
.||+++.+|..||++++..||+.. |.+|+| + ..|-.+.+..+.++++.|+++++++|.
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~--------------------G~pI~afd~t~~~~~~i~~g~l~~~~~~~~m~~~i~ 406 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY--------------------NLLILGFEETAHNRDFIASENIFEHNEVDQLISKLK 406 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc--------------------CCcEEEEecccCCcccccCCceecCCCHHHHHHHHH
Confidence 999999999999999999999996 334444 3 345555556688999999999999999
Q ss_pred HHhcCCH
Q 002984 508 LAINMRD 514 (861)
Q Consensus 508 ~aL~m~~ 514 (861)
++|+.+.
T Consensus 407 ~lL~d~~ 413 (438)
T TIGR02919 407 DLLNDPN 413 (438)
T ss_pred HHhcCHH
Confidence 9998663
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00039 Score=68.97 Aligned_cols=37 Identities=19% Similarity=0.095 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
|...++.+++.+ +++++++++|||+.+|+++.+.+|.
T Consensus 105 ~~~~~~~~~~~~---~~~~~e~l~IGD~~~Di~~A~~aGi 141 (161)
T TIGR01261 105 KIKLLEPYLKKN---LIDKARSYVIGDRETDMQLAENLGI 141 (161)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCC
Confidence 678889999998 9999999999999999999999997
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00042 Score=72.04 Aligned_cols=37 Identities=19% Similarity=0.229 Sum_probs=27.7
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
|-.|-..++ +.+ +.+.+.+.+.|||.||.+||+.+++
T Consensus 161 g~~K~~~l~---~~~---~~~~~~~~aY~Ds~~D~pmL~~a~~ 197 (211)
T PRK11590 161 GHEKVAQLE---RKI---GTPLRLYSGYSDSKQDNPLLYFCQH 197 (211)
T ss_pred ChHHHHHHH---HHh---CCCcceEEEecCCcccHHHHHhCCC
Confidence 344544444 344 4567788999999999999999997
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00092 Score=67.02 Aligned_cols=48 Identities=23% Similarity=0.292 Sum_probs=40.7
Q ss_pred hccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCC
Q 002984 588 KTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (861)
Q Consensus 588 ~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~ 638 (861)
....+++++|+||||+.. ....+.+.+.++|+.| ++.|..++|+|+.+
T Consensus 22 ~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~L-k~~g~~l~I~Sn~~ 69 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEEL-KAAGRKLLIVSNNA 69 (170)
T ss_pred HCCCCEEEEecCCccccC--CCCCcChhHHHHHHHH-HHcCCEEEEEeCCc
Confidence 357899999999999983 2336788999999999 78899999999877
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0053 Score=65.69 Aligned_cols=48 Identities=19% Similarity=0.286 Sum_probs=40.0
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhH
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSL 642 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l 642 (861)
+++.++||+||||.. ...+-+...++|+.| +++|.+++++|..+...-
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L-~~~g~~~iflTNn~~~s~ 54 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRL-KAAGKPVIFLTNNSTRSR 54 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHH-HHcCCeEEEEeCCCCCCH
Confidence 457899999999998 566778999999999 899999999996554433
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00019 Score=72.42 Aligned_cols=38 Identities=8% Similarity=0.073 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.+....+++++++ +++++++++|||+.+|+.+.+.+|.
T Consensus 142 p~p~~~~~~~~~~---~~~~~~~v~vgD~~~di~aA~~aG~ 179 (185)
T TIGR01990 142 PDPEIFLAAAEGL---GVSPSECIGIEDAQAGIEAIKAAGM 179 (185)
T ss_pred CChHHHHHHHHHc---CCCHHHeEEEecCHHHHHHHHHcCC
Confidence 3788899999999 9999999999999999999999997
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00026 Score=75.68 Aligned_cols=56 Identities=20% Similarity=0.202 Sum_probs=48.8
Q ss_pred cceEEEecCCccccCCCCCCCCC---CHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSP---GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~---s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
..|+|+||+||||++ ..+.+ ++.+.++|.+| ++.|+.++|+|+.+...+...++.+
T Consensus 127 ~~~~i~~D~D~TL~~---~~~~v~irdp~V~EtL~eL-kekGikLaIvTNg~Re~v~~~Le~l 185 (303)
T PHA03398 127 IPHVIVFDLDSTLIT---DEEPVRIRDPFVYDSLDEL-KERGCVLVLWSYGNREHVVHSLKET 185 (303)
T ss_pred eccEEEEecCCCccC---CCCccccCChhHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHHc
Confidence 468999999999999 66666 79999999999 7999999999988888888777654
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0027 Score=66.08 Aligned_cols=65 Identities=20% Similarity=0.224 Sum_probs=44.6
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC------CCcccceecCC
Q 002984 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR------KPSKAKYYLDD 828 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~------~~s~Aky~l~d 828 (861)
|..|..+++.+. ..++.+++|||+.||+.|++.++.. ++-+. ....+-+..++
T Consensus 142 g~~K~~~l~~~~-------~~~~~~i~iGDg~~D~~~a~~Ad~~--------------~ar~~l~~~~~~~~~~~~~~~~ 200 (214)
T TIGR03333 142 GCCKPSLIRKLS-------EPNDYHIVIGDSVTDVEAAKQSDLC--------------FARDYLLNECEELGLNHAPFQD 200 (214)
T ss_pred CCCHHHHHHHHh-------hcCCcEEEEeCCHHHHHHHHhCCee--------------EehHHHHHHHHHcCCCccCcCC
Confidence 345787777653 3567899999999999999999863 22221 12233344678
Q ss_pred HhHHHHHHHHHH
Q 002984 829 ATDVLKLLQGLA 840 (861)
Q Consensus 829 ~~eV~~~L~~L~ 840 (861)
..+|.+.|++..
T Consensus 201 f~di~~~l~~~~ 212 (214)
T TIGR03333 201 FYDVRKELENVK 212 (214)
T ss_pred HHHHHHHHHHHh
Confidence 899988887643
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0022 Score=67.57 Aligned_cols=28 Identities=25% Similarity=0.267 Sum_probs=23.0
Q ss_pred CCHHHHHHHHHhccceEEEecCCccccC
Q 002984 577 LSIDHIVSAYRKTERRAIFLDYDGTVVP 604 (861)
Q Consensus 577 l~~~~~~~~y~~s~~klI~~DlDGTLl~ 604 (861)
.++++|.++-+..+.-.|+||+|||+++
T Consensus 49 ~~~~~~~~~~~~~~p~av~~DIDeTvld 76 (237)
T PRK11009 49 VSVAQIEKSLEGRPPMAVGFDIDDTVLF 76 (237)
T ss_pred EEHHHhhhhccCCCCcEEEEECcCcccc
Confidence 6788888877555556999999999997
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00021 Score=72.48 Aligned_cols=37 Identities=11% Similarity=-0.062 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+...+..+++++ |++++++++|||+.+|+..-+.+|.
T Consensus 144 ~p~~~~~~~~~~---~~~~~~~l~igDs~~di~aA~~aG~ 180 (188)
T PRK10725 144 APDTFLRCAQLM---GVQPTQCVVFEDADFGIQAARAAGM 180 (188)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeccHhhHHHHHHCCC
Confidence 778899999999 9999999999999999999999997
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=97.32 E-value=6.1e-05 Score=76.12 Aligned_cols=37 Identities=8% Similarity=-0.063 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+...++++++++ |++++++++|||+.+|+.+.+.+|.
T Consensus 144 ~~~~~~~~~~~~---~~~~~~~v~IgD~~~di~aA~~~G~ 180 (185)
T TIGR02009 144 HPETFLLAAELL---GVSPNECVVFEDALAGVQAARAAGM 180 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCC
Confidence 566788999998 9999999999999999999999987
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0013 Score=68.50 Aligned_cols=66 Identities=15% Similarity=0.110 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccceecCCHhHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDDATDV 832 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d~~eV 832 (861)
+....+.+++++. |++++++++|||+. +|+..-+.+|.. ++.+..|..+ ..+.+.+++..++
T Consensus 154 ~~~~~~~~~~~~~--~~~~~~~v~igD~~~~di~~A~~~G~~-----------~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 154 DKEIFNYALERMP--KFSKEEVLMIGDSLTADIKGGQNAGLD-----------TCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred CHHHHHHHHHHhc--CCCchheEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCceEECCHHHH
Confidence 5667788887652 68899999999997 899999999973 3455555322 3566888888888
Q ss_pred HHHH
Q 002984 833 LKLL 836 (861)
Q Consensus 833 ~~~L 836 (861)
..+|
T Consensus 221 ~~~~ 224 (224)
T TIGR02254 221 YEIL 224 (224)
T ss_pred HhhC
Confidence 7653
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0003 Score=68.88 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESIL 796 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 796 (861)
+...+.++++++ |+++ ++++|||+.+|+.+-+.+|
T Consensus 120 ~~~~~~~~~~~~---~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 120 EPEIFLAALESL---GLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHHc---CCCC-CEEEEeCCHHHHHHHHHcc
Confidence 688999999999 9988 9999999999999988775
|
HAD subfamilies caused by an overly broad single model. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=8.5e-05 Score=77.60 Aligned_cols=38 Identities=8% Similarity=-0.101 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
+......+++++ |+++++|++|||+.+|+...+.+|..
T Consensus 144 ~p~~~~~a~~~~---~~~p~~~l~igDs~~di~aA~~aG~~ 181 (221)
T PRK10563 144 DPALMFHAAEAM---NVNVENCILVDDSSAGAQSGIAAGME 181 (221)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCCE
Confidence 788999999999 99999999999999999999999973
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0013 Score=66.38 Aligned_cols=40 Identities=23% Similarity=0.189 Sum_probs=32.8
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 752 KPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.+.|..|+..++.+++.. ++.+++|||+.||+.+.+.++.
T Consensus 144 ~~~g~~K~~~~~~~~~~~------~~~~i~iGD~~~D~~aa~~~d~ 183 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPK------YQHIIYIGDGVTDVCPAKLSDV 183 (188)
T ss_pred CCCCCCHHHHHHHHHhhc------CceEEEECCCcchhchHhcCCc
Confidence 345677988888887642 6889999999999999999875
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.012 Score=62.30 Aligned_cols=50 Identities=22% Similarity=0.308 Sum_probs=41.7
Q ss_pred EEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEC---CCChhhHHHHhcc
Q 002984 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAP 648 (861)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~T---GR~~~~l~~~~~~ 648 (861)
++||+||||++ .... .+.+.++|+.+ +..|.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~---~~~~-~~~a~e~i~~l-~~~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWL---GHKP-IPGAAEALNRL-RAKGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCc---CCcc-CcCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 58999999999 4444 45899999999 78899999998 8999988777644
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0022 Score=64.29 Aligned_cols=56 Identities=30% Similarity=0.215 Sum_probs=42.7
Q ss_pred ceEEEecCCccccCCCCC-----------------------CCCCCHHHHHHHHHhhcCCCCeEEEECCC-ChhhHHHHh
Q 002984 591 RRAIFLDYDGTVVPETSI-----------------------IKSPGPEVISVLKTLCSDPNNTVFIVSGR-GRSSLSEWL 646 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~-----------------------~~~~s~~~~~~L~~L~~~~g~~v~I~TGR-~~~~l~~~~ 646 (861)
.|+++||+|+||.++.-. .-.+-+.+.++|+.| +++|..++|+|+. ....+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~L-k~~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTL-KDAGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHH-HHCCCEEEEEeCCCChHHHHHHH
Confidence 689999999999984310 012347888999998 7889999999988 777777666
Q ss_pred c
Q 002984 647 A 647 (861)
Q Consensus 647 ~ 647 (861)
.
T Consensus 81 ~ 81 (174)
T TIGR01685 81 G 81 (174)
T ss_pred H
Confidence 3
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0017 Score=82.77 Aligned_cols=61 Identities=10% Similarity=0.023 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC-----CcccceecCCHhHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK-----PSKAKYYLDDATDV 832 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~Aky~l~d~~eV 832 (861)
+......+++++ |++++++++|||+.+|+...+.+|. .+++|..|.. ...|.+.+++..++
T Consensus 220 ~Pe~~~~a~~~l---gv~p~e~v~IgDs~~Di~AA~~aGm-----------~~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 220 APDIFLAAAKIL---GVPTSECVVIEDALAGVQAARAAGM-----------RCIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CHHHHHHHHHHc---CcCcccEEEEcCCHHHHHHHHHcCC-----------EEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 678889999999 9999999999999999999999997 3456665532 25677889998886
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0017 Score=77.58 Aligned_cols=64 Identities=16% Similarity=0.278 Sum_probs=51.8
Q ss_pred HHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCC-CeEEEECCCChhhHHHHhcc
Q 002984 584 SAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPN-NTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 584 ~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g-~~v~I~TGR~~~~l~~~~~~ 648 (861)
+.+.....+.+++..||+++..-.....+-+.+.++|+.| ++.| +.++++||.+...+..+.+.
T Consensus 357 ~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L-~~~g~i~v~ivTgd~~~~a~~i~~~ 421 (556)
T TIGR01525 357 NEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAAL-KRAGGIKLVMLTGDNRSAAEAVAAE 421 (556)
T ss_pred HHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHH-HHcCCCeEEEEeCCCHHHHHHHHHH
Confidence 3455566788999999988863223566889999999999 7889 99999999999999988854
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.015 Score=61.78 Aligned_cols=47 Identities=19% Similarity=0.311 Sum_probs=39.4
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhh
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS 641 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~ 641 (861)
++++++||+||||.. ...+.+.+.++|++| ++.|..++|+|..+...
T Consensus 7 ~~~~~~~D~dG~l~~----~~~~~pga~e~L~~L-~~~G~~~~ivTN~~~~~ 53 (242)
T TIGR01459 7 DYDVFLLDLWGVIID----GNHTYPGAVQNLNKI-IAQGKPVYFVSNSPRNI 53 (242)
T ss_pred cCCEEEEeccccccc----CCccCccHHHHHHHH-HHCCCEEEEEeCCCCCh
Confidence 367999999999998 345789999999999 78999999998866543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.003 Score=79.06 Aligned_cols=138 Identities=17% Similarity=0.223 Sum_probs=96.1
Q ss_pred HHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEE
Q 002984 583 VSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFI 662 (861)
Q Consensus 583 ~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i 662 (861)
...+.....+.+++-.||+++..-.-...+-+...++|++| ++.|+.++++||.+...++.+.+.+ ++..
T Consensus 622 ~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L-~~~gi~v~~~Tgd~~~~a~~ia~~l---gi~~------ 691 (834)
T PRK10671 622 ITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRL-HKAGYRLVMLTGDNPTTANAIAKEA---GIDE------ 691 (834)
T ss_pred HHHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc---CCCE------
Confidence 34455556778888889987641113445667888999998 7899999999999999988887432 2200
Q ss_pred EeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEE
Q 002984 663 RWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVV 742 (861)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v 742 (861)
.+.
T Consensus 692 ------------------------------------------------~~~----------------------------- 694 (834)
T PRK10671 692 ------------------------------------------------VIA----------------------------- 694 (834)
T ss_pred ------------------------------------------------EEe-----------------------------
Confidence 000
Q ss_pred EEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC---
Q 002984 743 KRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP--- 819 (861)
Q Consensus 743 ~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~--- 819 (861)
++.|. .|..+++.+. ...+.++++||+.||.+|++.+|. +|++|+..
T Consensus 695 -------~~~p~--~K~~~i~~l~-------~~~~~v~~vGDg~nD~~al~~Agv--------------gia~g~g~~~a 744 (834)
T PRK10671 695 -------GVLPD--GKAEAIKRLQ-------SQGRQVAMVGDGINDAPALAQADV--------------GIAMGGGSDVA 744 (834)
T ss_pred -------CCCHH--HHHHHHHHHh-------hcCCEEEEEeCCHHHHHHHHhCCe--------------eEEecCCCHHH
Confidence 01122 2666666553 345789999999999999999985 78888753
Q ss_pred -cccceec--CCHhHHHHHHH
Q 002984 820 -SKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 820 -s~Aky~l--~d~~eV~~~L~ 837 (861)
..|++.+ ++.+++..+++
T Consensus 745 ~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 745 IETAAITLMRHSLMGVADALA 765 (834)
T ss_pred HHhCCEEEecCCHHHHHHHHH
Confidence 4555554 67888888886
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0016 Score=67.60 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=27.5
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
|..|-..++.. + +.+.+.+.+.|||.||.+||+.+++
T Consensus 160 g~~Kv~rl~~~---~---~~~~~~~~aYsDS~~D~pmL~~a~~ 196 (210)
T TIGR01545 160 GHEKVAQLEQK---I---GSPLKLYSGYSDSKQDNPLLAFCEH 196 (210)
T ss_pred ChHHHHHHHHH---h---CCChhheEEecCCcccHHHHHhCCC
Confidence 44455544443 3 4456778999999999999999997
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0011 Score=70.37 Aligned_cols=37 Identities=16% Similarity=0.048 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCC-cchHHHHHHccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDD-RSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~ 797 (861)
+......+++++ |++++++++|||+ ..|+..-+.+|.
T Consensus 165 ~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~A~~aG~ 202 (238)
T PRK10748 165 FSDMYHLAAEKL---NVPIGEILHVGDDLTTDVAGAIRCGM 202 (238)
T ss_pred cHHHHHHHHHHc---CCChhHEEEEcCCcHHHHHHHHHCCC
Confidence 677888889998 9999999999999 599999999997
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0075 Score=67.26 Aligned_cols=39 Identities=18% Similarity=0.141 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
.|...+..+++.+ +++++++++|||+.+|+...+.+|..
T Consensus 105 P~p~~l~~a~~~l---~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 105 PKTGLVEEYLAEG---AIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred CCHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 3677888888888 89999999999999999999999973
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.00067 Score=69.78 Aligned_cols=37 Identities=19% Similarity=0.209 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~ 797 (861)
+....+++++++ |++++++++|||+. +|+...+.+|.
T Consensus 162 ~~~~~~~~~~~~---~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 162 DPKIFQEALERA---GISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred CHHHHHHHHHHc---CCChhHEEEECCCchHHHHHHHHcCC
Confidence 456789999999 99999999999997 89999999986
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0049 Score=68.37 Aligned_cols=115 Identities=12% Similarity=0.073 Sum_probs=81.7
Q ss_pred cceEEEecCCccccCCCCCC--------CCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEE
Q 002984 590 ERRAIFLDYDGTVVPETSII--------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYF 661 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~--------~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (861)
.+|+|++|+|+||....-.. ..+.+.+.++|++| +++|+.++|+|..+...+...+..-+. +
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L-~~~Gi~lai~S~n~~~~a~~~l~~~~~--~------- 71 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTL-KKQGFLLALASKNDEDDAKKVFERRKD--F------- 71 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHH-HhCCCEEEEEcCCCHHHHHHHHHhCcc--c-------
Confidence 36899999999999732101 12347899999999 799999999999998888777632100 0
Q ss_pred EEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEE
Q 002984 662 IRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAV 741 (861)
Q Consensus 662 i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 741 (861)
... .++ ...
T Consensus 72 ------------~~~------------~~~-----------------------------------------------f~~ 80 (320)
T TIGR01686 72 ------------ILQ------------AED-----------------------------------------------FDA 80 (320)
T ss_pred ------------cCc------------HHH-----------------------------------------------eeE
Confidence 000 000 001
Q ss_pred EEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 742 VKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 742 v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+..+ .. .|...++.+++++ |++++.+++|||+..|+.+.+.+.-
T Consensus 81 ~~~~-----~~----pk~~~i~~~~~~l---~i~~~~~vfidD~~~d~~~~~~~lp 124 (320)
T TIGR01686 81 RSIN-----WG----PKSESLRKIAKKL---NLGTDSFLFIDDNPAERANVKITLP 124 (320)
T ss_pred EEEe-----cC----chHHHHHHHHHHh---CCCcCcEEEECCCHHHHHHHHHHCC
Confidence 1111 12 4999999999999 9999999999999999999988653
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0033 Score=74.74 Aligned_cols=132 Identities=18% Similarity=0.234 Sum_probs=93.4
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCC-eEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCc
Q 002984 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNN-TVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKT 667 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~-~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~ 667 (861)
...+.++.-.||++...-.....+-+.+.++|++| ++.|+ +++++||.+...++.+.+.+ |+-
T Consensus 340 ~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L-~~~Gi~~v~vvTgd~~~~a~~i~~~l---gi~------------ 403 (536)
T TIGR01512 340 AGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAEL-KALGIEKVVMLTGDRRAVAERVAREL---GID------------ 403 (536)
T ss_pred CCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHH-HHcCCCcEEEEcCCCHHHHHHHHHHc---CCh------------
Confidence 33456677778887752223456789999999999 79999 99999999999999988543 320
Q ss_pred ceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCe
Q 002984 668 SEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQH 747 (861)
Q Consensus 668 ~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~ 747 (861)
+.|.
T Consensus 404 ----------------------~~f~------------------------------------------------------ 407 (536)
T TIGR01512 404 ----------------------EVHA------------------------------------------------------ 407 (536)
T ss_pred ----------------------hhhh------------------------------------------------------
Confidence 0000
Q ss_pred EEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC-CC----Cccc
Q 002984 748 IVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG-RK----PSKA 822 (861)
Q Consensus 748 ~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~----~s~A 822 (861)
++.| -.|...++++.+ ..++++++||+.||.+|++.++. +|++| ++ ...|
T Consensus 408 --~~~p--~~K~~~i~~l~~-------~~~~v~~vGDg~nD~~al~~A~v--------------gia~g~~~~~~~~~~a 462 (536)
T TIGR01512 408 --ELLP--EDKLEIVKELRE-------KYGPVAMVGDGINDAPALAAADV--------------GIAMGASGSDVAIETA 462 (536)
T ss_pred --ccCc--HHHHHHHHHHHh-------cCCEEEEEeCCHHHHHHHHhCCE--------------EEEeCCCccHHHHHhC
Confidence 0001 135555555533 34799999999999999999985 78888 43 3567
Q ss_pred ceec--CCHhHHHHHHH
Q 002984 823 KYYL--DDATDVLKLLQ 837 (861)
Q Consensus 823 ky~l--~d~~eV~~~L~ 837 (861)
++++ ++..++.++++
T Consensus 463 d~vl~~~~l~~l~~~i~ 479 (536)
T TIGR01512 463 DVVLLNDDLSRLPQAIR 479 (536)
T ss_pred CEEEECCCHHHHHHHHH
Confidence 8888 78888877654
|
. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.006 Score=73.51 Aligned_cols=140 Identities=13% Similarity=0.188 Sum_probs=99.5
Q ss_pred HHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcE
Q 002984 581 HIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660 (861)
Q Consensus 581 ~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~ 660 (861)
...+.+.+...+.+++-+|++++..-.-...+-+++.+++++| ++.|++++++||-....+..+.+++ |+..
T Consensus 416 ~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l-~~~Gi~v~miTGD~~~ta~~iA~~l---GI~~---- 487 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQL-RKMGIKTIMITGDNRLTAAAIAAEA---GVDD---- 487 (675)
T ss_pred HHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc---CCCE----
Confidence 3445555666788888888887752223556789999999998 8999999999999999999998543 3310
Q ss_pred EEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCE
Q 002984 661 FIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPA 740 (861)
Q Consensus 661 ~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~ 740 (861)
+ +
T Consensus 488 -------------------------------------------------v-~---------------------------- 489 (675)
T TIGR01497 488 -------------------------------------------------F-I---------------------------- 489 (675)
T ss_pred -------------------------------------------------E-E----------------------------
Confidence 0 0
Q ss_pred EEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC--
Q 002984 741 VVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK-- 818 (861)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-- 818 (861)
-++.|. +|...++.+.++ | ..|+++||+.||.++++.++. ++++|++
T Consensus 490 --------a~~~Pe--dK~~~v~~lq~~----g---~~VamvGDG~NDapAL~~Adv--------------GiAm~~gt~ 538 (675)
T TIGR01497 490 --------AEATPE--DKIALIRQEQAE----G---KLVAMTGDGTNDAPALAQADV--------------GVAMNSGTQ 538 (675)
T ss_pred --------cCCCHH--HHHHHHHHHHHc----C---CeEEEECCCcchHHHHHhCCE--------------eEEeCCCCH
Confidence 012232 377777776543 2 369999999999999999985 7888864
Q ss_pred --Ccccceec--CCHhHHHHHHH
Q 002984 819 --PSKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 819 --~s~Aky~l--~d~~eV~~~L~ 837 (861)
+..|++++ +++..+.+.++
T Consensus 539 ~akeaadivLldd~~s~Iv~av~ 561 (675)
T TIGR01497 539 AAKEAANMVDLDSDPTKLIEVVH 561 (675)
T ss_pred HHHHhCCEEECCCCHHHHHHHHH
Confidence 45677765 45777666655
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0081 Score=63.04 Aligned_cols=47 Identities=28% Similarity=0.374 Sum_probs=38.6
Q ss_pred EecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 751 VKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 751 I~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
--|.+..||..++.+++.....|...+.|++|||+.||.-....++.
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~ 190 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRP 190 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCC
Confidence 44778899999999998754457889999999999999877766543
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0012 Score=67.58 Aligned_cols=34 Identities=15% Similarity=-0.059 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFES 794 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ 794 (861)
+...+..+++++ |++++++++|||+.+|+.+.+.
T Consensus 163 ~p~~~~~~~~~~---~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 163 NPEPLILAAKAL---GVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred CHHHHHHHHHHh---CcCcccEEEEeCCHHHHHHHHh
Confidence 678889999998 9999999999999999987664
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0084 Score=60.80 Aligned_cols=49 Identities=22% Similarity=0.378 Sum_probs=39.8
Q ss_pred eEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHH-HHHHc
Q 002984 747 HIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDED-MFESI 795 (861)
Q Consensus 747 ~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~-Mf~~a 795 (861)
+....-|++.-||..+..+.......|+..+.++++||+.||+- |++..
T Consensus 153 hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr 202 (256)
T KOG3120|consen 153 HSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLR 202 (256)
T ss_pred CccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcc
Confidence 34456788999999999998877677999999999999999984 44433
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0076 Score=70.14 Aligned_cols=36 Identities=11% Similarity=0.117 Sum_probs=28.3
Q ss_pred CCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002984 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 612 ~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
+.+.+.+.|+++ +++|..++++|+.+...++.+.+.
T Consensus 73 ~~pga~e~L~~l-k~~G~~v~LaTas~~~~a~~i~~~ 108 (479)
T PRK08238 73 YNEEVLDYLRAE-RAAGRKLVLATASDERLAQAVAAH 108 (479)
T ss_pred CChhHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHH
Confidence 347788888888 788888888888888888777643
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0077 Score=71.99 Aligned_cols=60 Identities=12% Similarity=0.221 Sum_probs=48.6
Q ss_pred hccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002984 588 KTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 588 ~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
....+.++++.||+++..-.-...+-+...++|++| ++.|+.++++||.+...++.+.+.
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~L-k~~Gi~v~ilSgd~~~~a~~ia~~ 441 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQAL-KRRGIEPVMLTGDNRKTAKAVAKE 441 (562)
T ss_pred hCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHH
Confidence 344678999999998762213556789999999999 789999999999999998888743
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0061 Score=63.08 Aligned_cols=37 Identities=16% Similarity=0.157 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.....+.+++++ |++++++++|||+..|+.+-+.+|.
T Consensus 154 ~p~~~~~~~~~~---g~~~~~~l~i~D~~~di~aA~~aG~ 190 (211)
T TIGR02247 154 DPRIYQLMLERL---GVAPEECVFLDDLGSNLKPAAALGI 190 (211)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHcCC
Confidence 466888999999 9999999999999999999999997
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.018 Score=72.66 Aligned_cols=165 Identities=17% Similarity=0.277 Sum_probs=101.8
Q ss_pred HHHHHhccceEEEecCCc-----cccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEec
Q 002984 583 VSAYRKTERRAIFLDYDG-----TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAE 657 (861)
Q Consensus 583 ~~~y~~s~~klI~~DlDG-----TLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliae 657 (861)
.+.|.+...|.+++=+++ |++..-....++-+.+.++++++ ++.|+.++++||-+......+.+. +|+...
T Consensus 495 ~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l-~~~Gi~v~miTGD~~~tA~~ia~~---~Gi~~~ 570 (884)
T TIGR01522 495 AAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTL-ITGGVRIIMITGDSQETAVSIARR---LGMPSK 570 (884)
T ss_pred HHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH---cCCCCC
Confidence 344555567888877665 44432223556789999999998 899999999999999999999854 455332
Q ss_pred CcEEEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcC
Q 002984 658 HGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLAN 737 (861)
Q Consensus 658 nG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~ 737 (861)
++..+ . |..++ .. ..++ +.+.+.+
T Consensus 571 ~~~~v------------~----------------------g~~l~-----------~~-------~~~~----l~~~~~~ 594 (884)
T TIGR01522 571 TSQSV------------S----------------------GEKLD-----------AM-------DDQQ----LSQIVPK 594 (884)
T ss_pred CCcee------------E----------------------hHHhH-----------hC-------CHHH----HHHHhhc
Confidence 21110 0 00000 00 0011 1122221
Q ss_pred CCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC
Q 002984 738 EPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR 817 (861)
Q Consensus 738 ~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~ 817 (861)
. . -+-.+.|. .|...++.+-+ . | +.|.++||+.||.+|++.|+. +|++|.
T Consensus 595 ~--~-----Vfar~~P~--~K~~iv~~lq~-~---g---~~v~mvGDGvND~pAl~~AdV--------------Gia~g~ 644 (884)
T TIGR01522 595 V--A-----VFARASPE--HKMKIVKALQK-R---G---DVVAMTGDGVNDAPALKLADI--------------GVAMGQ 644 (884)
T ss_pred C--e-----EEEECCHH--HHHHHHHHHHH-C---C---CEEEEECCCcccHHHHHhCCe--------------eEecCC
Confidence 1 1 11233343 47666665432 2 3 689999999999999999985 778874
Q ss_pred -C----Ccccceec--CCHhHHHHHHH
Q 002984 818 -K----PSKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 818 -~----~s~Aky~l--~d~~eV~~~L~ 837 (861)
. +..|++++ ++...+.++++
T Consensus 645 ~g~~va~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 645 TGTDVAKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred CcCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence 2 35678888 56777777655
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0033 Score=65.70 Aligned_cols=64 Identities=22% Similarity=0.315 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCCCC-------cccceecCCHh
Q 002984 759 GLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGRKP-------SKAKYYLDDAT 830 (861)
Q Consensus 759 g~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-------s~Aky~l~d~~ 830 (861)
...-+.+++++ |+++++++.|||+. ||+.-.+.+|.. +|-+.... ..+.+.+.+..
T Consensus 157 ~~~f~~~~~~~---g~~p~~~l~VgD~~~~di~gA~~~G~~-------------~vwi~~~~~~~~~~~~~~~~~i~~l~ 220 (229)
T COG1011 157 PEIFEYALEKL---GVPPEEALFVGDSLENDILGARALGMK-------------TVWINRGGKPLPDALEAPDYEISSLA 220 (229)
T ss_pred cHHHHHHHHHc---CCCcceEEEECCChhhhhHHHHhcCcE-------------EEEECCCCCCCCCCccCCceEEcCHH
Confidence 46778889999 99999999999985 887999999873 55444322 35667778888
Q ss_pred HHHHHHHH
Q 002984 831 DVLKLLQG 838 (861)
Q Consensus 831 eV~~~L~~ 838 (861)
++..++..
T Consensus 221 ~l~~~~~~ 228 (229)
T COG1011 221 ELLDLLER 228 (229)
T ss_pred HHHHHHhh
Confidence 88877754
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0055 Score=59.92 Aligned_cols=30 Identities=20% Similarity=0.172 Sum_probs=25.6
Q ss_pred HHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 765 VLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 765 ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.++.+ |.+++++++|||+.+|+.+...++.
T Consensus 107 ~l~~l---~~~p~~~i~i~Ds~~~~~aa~~ngI 136 (148)
T smart00577 107 DLSLL---GRDLSNVIIIDDSPDSWPFHPENLI 136 (148)
T ss_pred cHHHc---CCChhcEEEEECCHHHhhcCccCEE
Confidence 36667 8999999999999999998877765
|
|
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.12 Score=56.90 Aligned_cols=203 Identities=21% Similarity=0.263 Sum_probs=111.6
Q ss_pred CCHHHHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc-------
Q 002984 577 LSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC------- 649 (861)
Q Consensus 577 l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~------- 649 (861)
|++.++..--+..+-+|+-||=|+||.+.. ..-..+..++.-|-+| -..|+.|.|+|.=.+....++..++
T Consensus 133 LN~AQi~al~~~~~L~LvTFDgDvTLY~DG-~sl~~d~pvi~~ii~L-L~~gv~VgIVTAAGY~~a~kY~~RL~GLL~a~ 210 (408)
T PF06437_consen 133 LNTAQIMALAKNYGLKLVTFDGDVTLYEDG-ASLEPDNPVIPRIIKL-LRRGVKVGIVTAAGYPGAEKYEERLHGLLDAF 210 (408)
T ss_pred HHHHHHHHhcccCCceEEEEcCCcccccCC-CCCCCCchHHHHHHHH-HhcCCeEEEEeCCCCCChHHHHHHHHHHHHHH
Confidence 444555444444478999999999999933 1222356666666666 4789999999987776655544332
Q ss_pred c---CCc---------eEecCcEEEEeCCc----------ceEEecCCccChHHH--------HHHHHHHHHHhhc--CC
Q 002984 650 E---MLG---------IAAEHGYFIRWNKT----------SEWETNHLGADLEWK--------KIVEPVMRSYTEA--TD 697 (861)
Q Consensus 650 ~---~lg---------liaenG~~i~~~~~----------~~~~~~~~~~~~~w~--------~~v~~i~~~y~~~--~~ 697 (861)
. .+. +.+|.-+..+.... ..|... .-..|. +.++..+.....+ .|
T Consensus 211 ~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~---~m~~W~~~dI~~lLD~AE~~L~~~~~~l~Lp 287 (408)
T PF06437_consen 211 KDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLP---EMKTWSEEDITELLDIAEAALRDCVKRLNLP 287 (408)
T ss_pred HhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCc---cccCcCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 1 111 22344455554432 223211 111242 2222233333322 23
Q ss_pred CceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcC------CCEEEEEcCe--EEEEecCCCCHHHHHHHHHHHh
Q 002984 698 GSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLAN------EPAVVKRGQH--IVEVKPQGVSKGLVAEKVLVRM 769 (861)
Q Consensus 698 gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~------~~~~v~~g~~--~vEI~p~gvsKg~al~~ll~~l 769 (861)
..+-.|+-++..... ....+...+.+|+.-.++..+.. .++....|.. +++|=. |.-|++.+.+.+
T Consensus 288 -a~IiRK~RAVGivP~-~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDIGd----Ks~GV~~lQ~y~ 361 (408)
T PF06437_consen 288 -ATIIRKERAVGIVPK-PGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDIGD----KSLGVRALQKYF 361 (408)
T ss_pred -eeEEeecceeeEecC-CCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEcCC----cHHhHHHHHHHH
Confidence 445556666555432 11222334555554444444432 3455555433 567654 888988877766
Q ss_pred -hcCCCCCCeEEEEeCC-----cchHH
Q 002984 770 -FNGGRPPDFVMCVGDD-----RSDED 790 (861)
Q Consensus 770 -~~~gi~~d~vlaiGD~-----~ND~~ 790 (861)
...++.+.+++-+||- .||..
T Consensus 362 ~~~~~i~~~~tLHVGDQF~s~GaNDfk 388 (408)
T PF06437_consen 362 DPEGGIKPSETLHVGDQFLSAGANDFK 388 (408)
T ss_pred HhccCCCccceeeehhhhhccCCcchh
Confidence 1237999999999994 37754
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0069 Score=61.98 Aligned_cols=37 Identities=24% Similarity=0.194 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+....+.+++++ |+++++++.|||+.+|+...+.+|.
T Consensus 150 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~Di~~A~~~G~ 186 (198)
T TIGR01428 150 APQVYQLALEAL---GVPPDEVLFVASNPWDLGGAKKFGF 186 (198)
T ss_pred CHHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHCCC
Confidence 577889999999 9999999999999999999999997
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0067 Score=63.54 Aligned_cols=50 Identities=16% Similarity=0.155 Sum_probs=40.2
Q ss_pred EEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 741 VVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.++.+.....-+| ........+++| |+.|++|++|.|+.+.+...+++|.
T Consensus 131 ~~v~~~dv~~~KP----~Pd~yL~Aa~~L---gv~P~~CvviEDs~~Gi~Aa~aAGm 180 (221)
T COG0637 131 VIVTADDVARGKP----APDIYLLAAERL---GVDPEECVVVEDSPAGIQAAKAAGM 180 (221)
T ss_pred hhccHHHHhcCCC----CCHHHHHHHHHc---CCChHHeEEEecchhHHHHHHHCCC
Confidence 3445545545566 567777788888 9999999999999999999999997
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.011 Score=57.69 Aligned_cols=60 Identities=23% Similarity=0.295 Sum_probs=53.0
Q ss_pred HHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002984 586 YRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 586 y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
.++..+|-|++|+|.||++. .+...++++++-+.++ ++.|+.++|+|..+..-+..+...
T Consensus 23 L~~~Gikgvi~DlDNTLv~w--d~~~~tpe~~~W~~e~-k~~gi~v~vvSNn~e~RV~~~~~~ 82 (175)
T COG2179 23 LKAHGIKGVILDLDNTLVPW--DNPDATPELRAWLAEL-KEAGIKVVVVSNNKESRVARAAEK 82 (175)
T ss_pred HHHcCCcEEEEeccCceecc--cCCCCCHHHHHHHHHH-HhcCCEEEEEeCCCHHHHHhhhhh
Confidence 35667999999999999996 5677899999999999 899999999999999999888743
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.0013 Score=59.98 Aligned_cols=56 Identities=23% Similarity=0.417 Sum_probs=40.2
Q ss_pred EEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCce
Q 002984 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGI 654 (861)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgl 654 (861)
|+||+||||.. ...+-|...++|+.| ++.|.+++++|..+...-..+...+..+|+
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L-~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDAL-RERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHH-HHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHH-HHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 68999999998 455678889999999 788999999997665554444443344443
|
... |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.017 Score=71.26 Aligned_cols=64 Identities=5% Similarity=0.092 Sum_probs=51.5
Q ss_pred HHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002984 584 SAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 584 ~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
+.+.....+.+++=+||+++..-.-..++-+...++|++| ++.|+.++++||.+...+..+.+.
T Consensus 541 ~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L-~~~gi~~~llTGd~~~~a~~ia~~ 604 (741)
T PRK11033 541 NELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISEL-KALGIKGVMLTGDNPRAAAAIAGE 604 (741)
T ss_pred HHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHH
Confidence 4556666788888889987752113456789999999999 789999999999999999999854
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.0046 Score=62.58 Aligned_cols=37 Identities=16% Similarity=0.149 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+....+.+++++ |++++++++|||+..|+..-+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~l~vgD~~~di~aA~~~G~ 179 (184)
T TIGR01993 143 SPQAYEKALREA---GVDPERAIFFDDSARNIAAAKALGM 179 (184)
T ss_pred CHHHHHHHHHHh---CCCccceEEEeCCHHHHHHHHHcCC
Confidence 677889999999 9999999999999999999999986
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.011 Score=60.94 Aligned_cols=55 Identities=18% Similarity=0.181 Sum_probs=39.3
Q ss_pred EEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002984 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
.+.+..+++++........+-+.+.++|+.| ++.|+.++++||-+...+..+...
T Consensus 109 ~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~L-~~~Gi~~~i~TGD~~~~a~~~~~~ 163 (215)
T PF00702_consen 109 VIVLAVNLIFLGLFGLRDPLRPGAKEALQEL-KEAGIKVAILTGDNESTASAIAKQ 163 (215)
T ss_dssp CEEEEESHEEEEEEEEEEEBHTTHHHHHHHH-HHTTEEEEEEESSEHHHHHHHHHH
T ss_pred ccceeecCeEEEEEeecCcchhhhhhhhhhh-hccCcceeeeeccccccccccccc
Confidence 3444446555541111234567899999999 788999999999999999988854
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.3 Score=54.21 Aligned_cols=48 Identities=19% Similarity=0.235 Sum_probs=36.8
Q ss_pred EEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCC----CCeEEEEC---CCChhhHHHH
Q 002984 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDP----NNTVFIVS---GRGRSSLSEW 645 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~----g~~v~I~T---GR~~~~l~~~ 645 (861)
.++||+||||.. ...+-+...++|+.| +.. |..++++| |++.....+.
T Consensus 2 ~~ifD~DGvL~~----g~~~i~ga~eal~~L-~~~~~~~g~~~~flTNn~g~s~~~~~~~ 56 (321)
T TIGR01456 2 GFAFDIDGVLFR----GKKPIAGASDALRRL-NRNQGQLKIPYIFLTNGGGFSERARAEE 56 (321)
T ss_pred EEEEeCcCceEC----CccccHHHHHHHHHH-hccccccCCCEEEEecCCCCCHHHHHHH
Confidence 589999999998 344588999999999 566 88888877 4556654443
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.024 Score=71.67 Aligned_cols=40 Identities=15% Similarity=0.369 Sum_probs=35.1
Q ss_pred CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002984 608 IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 608 ~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
...++-+.+.++++++ ++.|++++++||.+...+..+.+.
T Consensus 534 ~~Dplr~~v~e~I~~l-~~aGI~v~miTGD~~~tA~~ia~~ 573 (917)
T TIGR01116 534 MLDPPRPEVADAIEKC-RTAGIRVIMITGDNKETAEAICRR 573 (917)
T ss_pred eeCCCchhHHHHHHHH-HHCCCEEEEecCCCHHHHHHHHHH
Confidence 3456789999999998 899999999999999999988854
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.015 Score=49.65 Aligned_cols=60 Identities=23% Similarity=0.314 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCC-cchHHHHHHccccCCCCCCCCCCceEEEEeCCC--------CcccceecCC
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDD-RSDEDMFESILSTVSGPSLPVPPEIFACTVGRK--------PSKAKYYLDD 828 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------~s~Aky~l~d 828 (861)
....++.+++.+ +++++++++|||+ .+|+.+-+.+|.. ++.|..|.. ...++|++++
T Consensus 6 ~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~-----------~ilV~tG~~~~~~~~~~~~~pd~vv~~ 71 (75)
T PF13242_consen 6 SPGMLEQALKRL---GVDPSRCVMVGDSLETDIEAAKAAGID-----------TILVLTGVYSPEDLEKAEHKPDYVVDD 71 (75)
T ss_dssp SHHHHHHHHHHH---TSGGGGEEEEESSTTTHHHHHHHTTSE-----------EEEESSSSSCCCGHHHSSSTTSEEESS
T ss_pred cHHHHHHHHHHc---CCCHHHEEEEcCCcHhHHHHHHHcCCc-----------EEEECCCCCCHHHHhccCCCCCEEECC
Confidence 456788888998 9999999999999 9999999999973 345555542 2477788887
Q ss_pred HhH
Q 002984 829 ATD 831 (861)
Q Consensus 829 ~~e 831 (861)
..|
T Consensus 72 l~e 74 (75)
T PF13242_consen 72 LKE 74 (75)
T ss_dssp GGG
T ss_pred HHh
Confidence 765
|
... |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.098 Score=52.57 Aligned_cols=38 Identities=18% Similarity=-0.000 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
|.-.+..+++++ ++++...++|||..+|+....++|..
T Consensus 107 ~~gm~~~~~~~~---~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 107 KPGMLLSALKEY---NIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ChHHHHHHHHHh---CCCccceEEecCcHHHHHHHHHCCCC
Confidence 566778888888 89999999999999999999999874
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.034 Score=65.22 Aligned_cols=49 Identities=24% Similarity=0.306 Sum_probs=38.1
Q ss_pred ccceEEEecCCccccCCCCCC---------CCCCHHHHHHHHHhhcCCCCeEEEECCCC
Q 002984 589 TERRAIFLDYDGTVVPETSII---------KSPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~---------~~~s~~~~~~L~~L~~~~g~~v~I~TGR~ 638 (861)
...|+++||+||||+...+.. ..+.+.+.++|++| .+.|..++|+|..+
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L-~~~Gy~IvIvTNQ~ 223 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKEL-EADGFKICIFTNQG 223 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHH-HHCCCEEEEEECCc
Confidence 346899999999999743211 12467889999999 79999999999743
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.0026 Score=63.11 Aligned_cols=71 Identities=15% Similarity=0.097 Sum_probs=47.0
Q ss_pred EEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC-CCCcccceecC
Q 002984 749 VEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG-RKPSKAKYYLD 827 (861)
Q Consensus 749 vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~~s~Aky~l~ 827 (861)
-+-+..+-.|+.+++.+.+ +.+...++++||+.||++|..-+...++-+ ++.+- .-+..|+|+++
T Consensus 151 ~~ptsdsggKa~~i~~lrk-----~~~~~~~~mvGDGatDlea~~pa~afi~~~---------g~~~r~~vk~nak~~~~ 216 (227)
T KOG1615|consen 151 NEPTSDSGGKAEVIALLRK-----NYNYKTIVMVGDGATDLEAMPPADAFIGFG---------GNVIREGVKANAKWYVT 216 (227)
T ss_pred CCccccCCccHHHHHHHHh-----CCChheeEEecCCccccccCCchhhhhccC---------CceEcHhhHhccHHHHH
Confidence 3445556689999999887 668889999999999999887644321100 11111 12577888877
Q ss_pred CHhHHH
Q 002984 828 DATDVL 833 (861)
Q Consensus 828 d~~eV~ 833 (861)
+...+.
T Consensus 217 ~f~~L~ 222 (227)
T KOG1615|consen 217 DFYVLG 222 (227)
T ss_pred HHHHHc
Confidence 665543
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.11 Score=66.40 Aligned_cols=43 Identities=19% Similarity=0.248 Sum_probs=36.7
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceE
Q 002984 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIA 655 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgli 655 (861)
..++-+++.++++++ ++.|+.|+++|||+...+..+.+. +|++
T Consensus 566 ~Dplr~~v~~aI~~l-~~~Gi~v~~~TGd~~~ta~~ia~~---~gi~ 608 (997)
T TIGR01106 566 IDPPRAAVPDAVGKC-RSAGIKVIMVTGDHPITAKAIAKG---VGII 608 (997)
T ss_pred cCCChHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH---cCCC
Confidence 445778999999998 899999999999999999999854 4554
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.05 Score=65.83 Aligned_cols=67 Identities=10% Similarity=0.120 Sum_probs=51.7
Q ss_pred HHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002984 582 IVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 582 ~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
..+.+.+...+.+++-.|++++..-.-...+-+++.+++++| ++.|++++++||=.......+.+++
T Consensus 416 ~~~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~L-r~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 416 AVDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAEL-RKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 334555556677877788887752223456789999999998 8999999999999999999998543
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.02 Score=53.34 Aligned_cols=54 Identities=22% Similarity=0.326 Sum_probs=43.4
Q ss_pred CCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC--CC----cccceecCCHhHHHHHHHHH
Q 002984 773 GRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR--KP----SKAKYYLDDATDVLKLLQGL 839 (861)
Q Consensus 773 gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~----s~Aky~l~d~~eV~~~L~~L 839 (861)
+.+.+.|+++||+.||+.|++.+..+ -|++++ .+ ..|++++.+..++++++...
T Consensus 90 kk~~~k~vmVGnGaND~laLr~ADlG-------------I~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 90 KKRYEKVVMVGNGANDILALREADLG-------------ICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCCCcEEEEecCCcchHHHhhhcccc-------------eEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 55678999999999999999999875 356664 33 56888999999998887654
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.06 Score=65.12 Aligned_cols=70 Identities=9% Similarity=0.131 Sum_probs=50.7
Q ss_pred HHHHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002984 579 IDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 579 ~~~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
.+...+.+.+...+.++.-.|++++..-.-...+-++..+++++| ++.|+.++++||-+......+.+++
T Consensus 409 ~~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~L-r~~GI~vvMiTGDn~~TA~aIA~el 478 (673)
T PRK14010 409 LDALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFREL-REMGIETVMCTGDNELTAATIAKEA 478 (673)
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 344445555555565554447776642113456789999999998 8999999999999999999998543
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.098 Score=61.07 Aligned_cols=175 Identities=17% Similarity=0.187 Sum_probs=92.9
Q ss_pred CCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHHH
Q 002984 610 KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVM 689 (861)
Q Consensus 610 ~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~ 689 (861)
.++-+.++-.|+-| ++.|++|+..||-..+.+.-+.. .-+++.-+- .|.. .... .. +..+..-+
T Consensus 657 DkLQ~dVk~tLElL-RNAgikiWMLTGDKlETA~ciAk---Ss~L~sR~q-~ihv-----~~~v-~s-----r~dah~eL 720 (1051)
T KOG0210|consen 657 DKLQDDVKPTLELL-RNAGIKIWMLTGDKLETAICIAK---SSRLFSRGQ-YIHV-----IRSV-TS-----RGDAHNEL 720 (1051)
T ss_pred HHHhhhhHhHHHHH-hhcCcEEEEEcCcchhheeeeeh---hccceecCc-eEEE-----EEec-CC-----chHHHHHH
Confidence 34566777888888 89999999999988777654442 223332111 1110 0000 00 12222233
Q ss_pred HHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHh
Q 002984 690 RSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRM 769 (861)
Q Consensus 690 ~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l 769 (861)
+.+....+...+- .+.++. ...+-..+++.+.....+.++.. -..|. -|+..++.+-++-
T Consensus 721 ~~lR~k~~~aLvi-~G~Sl~------------~cl~yye~Ef~el~~~~~aVv~C-----RctPt--QKA~v~~llq~~t 780 (1051)
T KOG0210|consen 721 NNLRRKTDCALVI-DGESLE------------FCLKYYEDEFIELVCELPAVVCC-----RCTPT--QKAQVVRLLQKKT 780 (1051)
T ss_pred HHhhcCCCcEEEE-cCchHH------------HHHHHHHHHHHHHHHhcCcEEEE-----ecChh--HHHHHHHHHHHhh
Confidence 3333222211111 111111 11122223333322233322221 23343 3888777766654
Q ss_pred hcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC----CCcccceecCCHhHHHHHHHHH
Q 002984 770 FNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR----KPSKAKYYLDDATDVLKLLQGL 839 (861)
Q Consensus 770 ~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~----~~s~Aky~l~d~~eV~~~L~~L 839 (861)
| ..+.||||+.||..|.+.|+.+ +|+ +|+ +.-+|+|-+.....|-++|-.-
T Consensus 781 ---~---krvc~IGDGGNDVsMIq~A~~G------------iGI-~gkEGkQASLAADfSItqF~Hv~rLLl~H 835 (1051)
T KOG0210|consen 781 ---G---KRVCAIGDGGNDVSMIQAADVG------------IGI-VGKEGKQASLAADFSITQFSHVSRLLLWH 835 (1051)
T ss_pred ---C---ceEEEEcCCCccchheeecccc------------eee-ecccccccchhccccHHHHHHHHHHhhcc
Confidence 3 6799999999999999999875 233 343 3567888887777777776543
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.091 Score=66.78 Aligned_cols=138 Identities=16% Similarity=0.223 Sum_probs=88.9
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHH
Q 002984 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPV 688 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i 688 (861)
..++-+++.++++++ ++.|++++++||-....+..+.+. +|+...++..+. |. +
T Consensus 577 ~Dplr~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~iA~~---~GI~~~~~~vi~--G~----------~---------- 630 (941)
T TIGR01517 577 KDPLRPGVREAVQEC-QRAGITVRMVTGDNIDTAKAIARN---CGILTFGGLAME--GK----------E---------- 630 (941)
T ss_pred cCCCchhHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHH---cCCCCCCceEee--HH----------H----------
Confidence 446778999999998 899999999999999999999854 455433221110 00 0
Q ss_pred HHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHH
Q 002984 689 MRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVR 768 (861)
Q Consensus 689 ~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~ 768 (861)
++.. ..++ +.+.+.+. .-+-.+.|. .|...++.+.++
T Consensus 631 ~~~l------------------------------~~~e----l~~~i~~~-------~Vfar~sPe--~K~~iV~~lq~~ 667 (941)
T TIGR01517 631 FRRL------------------------------VYEE----MDPILPKL-------RVLARSSPL--DKQLLVLMLKDM 667 (941)
T ss_pred hhhC------------------------------CHHH----HHHHhccC-------eEEEECCHH--HHHHHHHHHHHC
Confidence 0000 0011 12122211 122345565 488888887542
Q ss_pred hhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC-CC----CcccceecC--CHhHHHHHH
Q 002984 769 MFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG-RK----PSKAKYYLD--DATDVLKLL 836 (861)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~----~s~Aky~l~--d~~eV~~~L 836 (861)
| .-|.++||+.||.+|++.|+. |+++| .+ +..|++++- +...+.+++
T Consensus 668 ----g---~vVam~GDGvNDapALk~AdV--------------GIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 668 ----G---EVVAVTGDGTNDAPALKLADV--------------GFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred ----C---CEEEEECCCCchHHHHHhCCc--------------ceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 3 369999999999999999986 67888 43 467788774 566666655
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.022 Score=58.08 Aligned_cols=158 Identities=19% Similarity=0.204 Sum_probs=96.3
Q ss_pred CHHHHHHHHHhccceEEEecCCccccCCCC---CCCC---------CCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHH
Q 002984 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETS---IIKS---------PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEW 645 (861)
Q Consensus 578 ~~~~~~~~y~~s~~klI~~DlDGTLl~~~~---~~~~---------~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~ 645 (861)
..+.++..+++..+|+|++|+|-||+...+ .+.. ++++.+..+++| ++.|+.|+|+|=-+...+
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l-~~~~I~v~VVTfSd~~~~--- 105 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRL-KNSNIKISVVTFSDKELI--- 105 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHH-HHCCCeEEEEEccchhhc---
Confidence 356678888999999999999999998222 1222 689999999998 799999999995443331
Q ss_pred hccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHH
Q 002984 646 LAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAK 725 (861)
Q Consensus 646 ~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~ 725 (861)
+. ..++-+|. | .+.++..++.-.. ..-++. ++.|. |.+ |+..
T Consensus 106 ----~~----~~~~~~Is--g---------------~~li~~~lk~s~~---~~~i~~-----~~~yy---p~~--w~~p 147 (219)
T PTZ00445 106 ----PS----ENRPRYIS--G---------------DRMVEAALKKSKC---DFKIKK-----VYAYY---PKF--WQEP 147 (219)
T ss_pred ----cc----cCCcceec--h---------------HHHHHHHHHhcCc---cceeee-----eeeeC---Ccc--cCCh
Confidence 10 01111110 1 1222222221100 001110 11111 111 1111
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 726 ELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 726 el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.....+ --++|....|..=+++++++. |+.+++++.|=|+....+..+.+|.
T Consensus 148 ~~y~~~-----------------gl~KPdp~iK~yHle~ll~~~---gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 148 SDYRPL-----------------GLDAPMPLDKSYHLKQVCSDF---NVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred hhhhhh-----------------cccCCCccchHHHHHHHHHHc---CCCHHHeEeecCCHHHHHHHHHCCC
Confidence 111111 134566667888889999999 9999999999999999999999987
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.19 Score=64.61 Aligned_cols=46 Identities=15% Similarity=0.199 Sum_probs=38.1
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecC
Q 002984 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEH 658 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaen 658 (861)
..++-+++.++++++ ++.|+.++++||.+...+..+.+ ..|++..+
T Consensus 654 ~d~lr~~~~~~I~~l-~~agi~v~miTGD~~~TA~~iA~---~~gii~~~ 699 (1054)
T TIGR01657 654 ENPLKPDTKEVIKEL-KRASIRTVMITGDNPLTAVHVAR---ECGIVNPS 699 (1054)
T ss_pred ecCCCccHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCCCCC
Confidence 345778999999998 89999999999999999999885 45565444
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.03 Score=56.59 Aligned_cols=34 Identities=24% Similarity=0.398 Sum_probs=29.1
Q ss_pred HHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002984 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 614 ~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
+++.+.|+.+ ++.|..++|+||-....++.++..
T Consensus 92 ~~~~e~i~~~-~~~~~~v~IvS~~~~~~i~~~~~~ 125 (192)
T PF12710_consen 92 PDAMELIREL-KDNGIKVVIVSGSPDEIIEPIAER 125 (192)
T ss_dssp TTHHHHHHHH-HHTTSEEEEEEEEEHHHHHHHHHH
T ss_pred hhHHHHHHHH-HHCCCEEEEECCCcHHHHHHHHHH
Confidence 5777899887 788999999999999888888753
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.078 Score=68.27 Aligned_cols=185 Identities=15% Similarity=0.124 Sum_probs=95.3
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChH-HHHHHHH
Q 002984 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLE-WKKIVEP 687 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~-w~~~v~~ 687 (861)
..++-+.+.++++.| ++.|++++++||=....+..+... .+++..+.-.+...+... .+.. ..+.+..
T Consensus 629 eD~lq~~v~etI~~L-~~AGIkv~mlTGD~~~TA~~IA~~---~~ii~~~~~~~~i~~~~~-------~~~~~~~~~i~~ 697 (1057)
T TIGR01652 629 EDKLQEGVPETIELL-RQAGIKIWVLTGDKVETAINIGYS---CRLLSRNMEQIVITSESL-------DATRSVEAAIKF 697 (1057)
T ss_pred hhhhhhccHHHHHHH-HHCCCeEEEEcCCcHHHHHHHHHH---hCCCCCCCeEEEEecCch-------hhhHHHHHHHHH
Confidence 445678888999998 899999999999999999988754 344443332222222110 0000 0011111
Q ss_pred HHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHH
Q 002984 688 VMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLV 767 (861)
Q Consensus 688 i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~ 767 (861)
.......... ..-..+...+...- ..+......++.+++.+.+......+ +..+.|. .|+..++.+-+
T Consensus 698 ~~~~~~~~~~-~~~~~~~~~lvi~G----~~l~~~l~~~~~~~f~~l~~~~~~vV-----~aR~sP~--qK~~IV~~lk~ 765 (1057)
T TIGR01652 698 GLEGTSEEFN-NLGDSGNVALVIDG----KSLGYALDEELEKEFLQLALKCKAVI-----CCRVSPS--QKADVVRLVKK 765 (1057)
T ss_pred HHHHHHHhhh-hhccCCceEEEEcc----HHHHHHHhhHHHHHHHHHHhhCCEEE-----EeCCCHH--HHHHHHHHHHh
Confidence 1100000000 00001111111110 00000000112223333332222111 1234454 49998888765
Q ss_pred HhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEe-CC----CCcccceecCCHhHHHHHH
Q 002984 768 RMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTV-GR----KPSKAKYYLDDATDVLKLL 836 (861)
Q Consensus 768 ~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v-G~----~~s~Aky~l~d~~eV~~~L 836 (861)
.. ..-|+++||+.||.+|++.|+.+ |.+ |. +...|+|.+.+...+.++|
T Consensus 766 ~~------~~~vl~iGDG~ND~~mlk~AdVG--------------Igi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 766 ST------GKTTLAIGDGANDVSMIQEADVG--------------VGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred cC------CCeEEEEeCCCccHHHHhhcCee--------------eEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 42 24799999999999999999864 443 32 3467888888766666665
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.031 Score=58.42 Aligned_cols=56 Identities=20% Similarity=0.256 Sum_probs=43.5
Q ss_pred cceEEEecCCccccCCCC-----------------------CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhh---HH
Q 002984 590 ERRAIFLDYDGTVVPETS-----------------------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS---LS 643 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~-----------------------~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~---l~ 643 (861)
.+-+++||+|.|+++..+ ...+.-+.++++++.+ ++.|+.|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l-~~~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKI-IELGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHH
Confidence 456899999999997221 1234568899999998 79999999999999765 44
Q ss_pred HHh
Q 002984 644 EWL 646 (861)
Q Consensus 644 ~~~ 646 (861)
+++
T Consensus 155 ~nL 157 (229)
T TIGR01675 155 DNL 157 (229)
T ss_pred HHH
Confidence 454
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.21 Score=61.90 Aligned_cols=167 Identities=19% Similarity=0.230 Sum_probs=100.5
Q ss_pred HHHHhccceEEEecC---Cc--cccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecC
Q 002984 584 SAYRKTERRAIFLDY---DG--TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEH 658 (861)
Q Consensus 584 ~~y~~s~~klI~~Dl---DG--TLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaen 658 (861)
+.+.....|.+.+=+ ++ +++..-.-..++-+++.++++++ ++.|+.++++||-+......+.++ +|+.. +
T Consensus 410 ~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~---lGI~~-~ 484 (755)
T TIGR01647 410 DELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERA-RHLGVEVKMVTGDHLAIAKETARR---LGLGT-N 484 (755)
T ss_pred HHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH---cCCCC-C
Confidence 344445567777654 33 44432223556789999999998 899999999999999999999864 44421 0
Q ss_pred cEEEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCC
Q 002984 659 GYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANE 738 (861)
Q Consensus 659 G~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~ 738 (861)
+. .+. .+. .|.. ... ...+++.+.+ .+.
T Consensus 485 ---~~-~~~-------------------~l~-------~~~~-----------~~~-------~~~~~~~~~~----~~~ 512 (755)
T TIGR01647 485 ---IY-TAD-------------------VLL-------KGDN-----------RDD-------LPSGELGEMV----EDA 512 (755)
T ss_pred ---Cc-CHH-------------------Hhc-------CCcc-----------hhh-------CCHHHHHHHH----HhC
Confidence 00 000 000 0000 000 0011222222 221
Q ss_pred CEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC
Q 002984 739 PAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK 818 (861)
Q Consensus 739 ~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 818 (861)
.-+-++.|.. |...++.+-++ | .-|.++||+.||.+.++.|+. ++++|++
T Consensus 513 -------~vfAr~~Pe~--K~~iV~~lq~~----G---~~VamvGDGvNDapAL~~AdV--------------GIAm~~g 562 (755)
T TIGR01647 513 -------DGFAEVFPEH--KYEIVEILQKR----G---HLVGMTGDGVNDAPALKKADV--------------GIAVAGA 562 (755)
T ss_pred -------CEEEecCHHH--HHHHHHHHHhc----C---CEEEEEcCCcccHHHHHhCCe--------------eEEecCC
Confidence 1234566654 88888876442 3 469999999999999999985 6778764
Q ss_pred ----Ccccceec--CCHhHHHHHHH
Q 002984 819 ----PSKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 819 ----~s~Aky~l--~d~~eV~~~L~ 837 (861)
+..|+.++ ++...+.+.++
T Consensus 563 tdvAkeaADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 563 TDAARSAADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred cHHHHHhCCEEEEcCChHHHHHHHH
Confidence 46677766 34555555544
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.22 Score=62.86 Aligned_cols=137 Identities=18% Similarity=0.224 Sum_probs=87.2
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHH
Q 002984 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPV 688 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i 688 (861)
..++-+++.++++++ ++.|+.++++||=+......+.++ +|+. ++ .. ....+
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~---lGI~--~~--------~v----~~G~e---------- 599 (902)
T PRK10517 548 LDPPKETTAPALKAL-KASGVTVKILTGDSELVAAKVCHE---VGLD--AG--------EV----LIGSD---------- 599 (902)
T ss_pred hCcchhhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHH---cCCC--cc--------Cc----eeHHH----------
Confidence 445778999999998 899999999999999999999854 4441 11 00 00000
Q ss_pred HHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHH
Q 002984 689 MRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVR 768 (861)
Q Consensus 689 ~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~ 768 (861)
++.+ + .+++.+.+ .+. .-+-.+.|.. |...++.+-++
T Consensus 600 l~~l-----------------------~-------~~el~~~~----~~~-------~VfAr~sPe~--K~~IV~~Lq~~ 636 (902)
T PRK10517 600 IETL-----------------------S-------DDELANLA----ERT-------TLFARLTPMH--KERIVTLLKRE 636 (902)
T ss_pred HHhC-----------------------C-------HHHHHHHH----hhC-------cEEEEcCHHH--HHHHHHHHHHC
Confidence 0000 0 01222222 111 1233555654 88888876542
Q ss_pred hhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Ccccceec--CCHhHHHHHHH
Q 002984 769 MFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l--~d~~eV~~~L~ 837 (861)
| .-|.++||+.||.++++.|+. +++||++ +..|+.++ ++...+.+.++
T Consensus 637 ----G---~vVam~GDGvNDaPALk~ADV--------------GIAmg~gtdvAkeaADiVLldd~~~~I~~ai~ 690 (902)
T PRK10517 637 ----G---HVVGFMGDGINDAPALRAADI--------------GISVDGAVDIAREAADIILLEKSLMVLEEGVI 690 (902)
T ss_pred ----C---CEEEEECCCcchHHHHHhCCE--------------EEEeCCcCHHHHHhCCEEEecCChHHHHHHHH
Confidence 3 569999999999999999985 7888864 46777776 34555555443
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.15 Score=61.94 Aligned_cols=140 Identities=19% Similarity=0.298 Sum_probs=98.7
Q ss_pred HHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcE
Q 002984 581 HIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660 (861)
Q Consensus 581 ~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~ 660 (861)
.-...+.....-++++-.||.+...-.-..++-++..+++++| ++.|+.+++.||=+....+.+.+++ |+.
T Consensus 507 ~~~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L-~~~Gi~~~mLTGDn~~~A~~iA~~l---GId----- 577 (713)
T COG2217 507 ERIEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAAL-KALGIKVVMLTGDNRRTAEAIAKEL---GID----- 577 (713)
T ss_pred hhHHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc---ChH-----
Confidence 3344555545558999999977651112446778999999999 8999999999999999998887432 320
Q ss_pred EEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCE
Q 002984 661 FIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPA 740 (861)
Q Consensus 661 ~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~ 740 (861)
+.+
T Consensus 578 -----------------------------~v~------------------------------------------------ 580 (713)
T COG2217 578 -----------------------------EVR------------------------------------------------ 580 (713)
T ss_pred -----------------------------hhe------------------------------------------------
Confidence 000
Q ss_pred EEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC--
Q 002984 741 VVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK-- 818 (861)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-- 818 (861)
-|+.|.+ |...++++-++ | ..|+++||+.||-+.|..+.. ++++|..
T Consensus 581 --------AellPed--K~~~V~~l~~~----g---~~VamVGDGINDAPALA~AdV--------------GiAmG~GtD 629 (713)
T COG2217 581 --------AELLPED--KAEIVRELQAE----G---RKVAMVGDGINDAPALAAADV--------------GIAMGSGTD 629 (713)
T ss_pred --------ccCCcHH--HHHHHHHHHhc----C---CEEEEEeCCchhHHHHhhcCe--------------eEeecCCcH
Confidence 0222322 77777777543 3 579999999999999999985 7888874
Q ss_pred --Ccccceec--CCHhHHHHHHH
Q 002984 819 --PSKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 819 --~s~Aky~l--~d~~eV~~~L~ 837 (861)
...|+..+ +|...|.++++
T Consensus 630 vA~eaADvvL~~~dL~~v~~ai~ 652 (713)
T COG2217 630 VAIEAADVVLMRDDLSAVPEAID 652 (713)
T ss_pred HHHHhCCEEEecCCHHHHHHHHH
Confidence 46777776 56777777665
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.26 Score=63.62 Aligned_cols=40 Identities=10% Similarity=0.111 Sum_probs=34.4
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002984 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
..++-+.+.+++++| ++.|+.++++||-.......+...+
T Consensus 724 ~D~lr~~v~~~I~~l-~~agi~v~mlTGD~~~tAi~IA~s~ 763 (1178)
T PLN03190 724 EDKLQQGVPEAIESL-RTAGIKVWVLTGDKQETAISIGYSS 763 (1178)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHh
Confidence 445788999999999 7999999999999999998887543
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.013 Score=58.06 Aligned_cols=43 Identities=30% Similarity=0.411 Sum_probs=32.0
Q ss_pred eEEEecCCccccCCCCCCC---------CCCHHHHHHHHHhhcCCCCeEEEEC
Q 002984 592 RAIFLDYDGTVVPETSIIK---------SPGPEVISVLKTLCSDPNNTVFIVS 635 (861)
Q Consensus 592 klI~~DlDGTLl~~~~~~~---------~~s~~~~~~L~~L~~~~g~~v~I~T 635 (861)
|+.+||+||||+...+... -..+.+.++|++| .+.|..++|+|
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l-~~~Gy~IvIvT 52 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALREL-HKKGYKIVIVT 52 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHH-HHTTEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHH-HhcCCeEEEEe
Confidence 6899999999998554111 1345799999999 78999999998
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.25 Score=62.27 Aligned_cols=137 Identities=17% Similarity=0.193 Sum_probs=86.5
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHH
Q 002984 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPV 688 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i 688 (861)
..++-+++.++++++ ++.|+.++++||-+......+.++ +|+.. + ... ...+
T Consensus 513 ~Dp~R~~~~~aI~~l-~~aGI~vvmiTGD~~~tA~aIA~~---lGI~~--~--------~v~----~g~~---------- 564 (867)
T TIGR01524 513 LDPPKESTKEAIAAL-FKNGINVKVLTGDNEIVTARICQE---VGIDA--N--------DFL----LGAD---------- 564 (867)
T ss_pred eCCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHH---cCCCC--C--------Cee----ecHh----------
Confidence 345779999999998 899999999999999999998854 44421 0 000 0000
Q ss_pred HHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHH
Q 002984 689 MRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVR 768 (861)
Q Consensus 689 ~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~ 768 (861)
++.. ..+++.+. +.+. .-+-.+.|.. |...++.+-++
T Consensus 565 l~~~------------------------------~~~el~~~----~~~~-------~vfAr~~Pe~--K~~iV~~lq~~ 601 (867)
T TIGR01524 565 IEEL------------------------------SDEELARE----LRKY-------HIFARLTPMQ--KSRIIGLLKKA 601 (867)
T ss_pred hhhC------------------------------CHHHHHHH----hhhC-------eEEEECCHHH--HHHHHHHHHhC
Confidence 0000 00122211 1111 1223455544 88888876442
Q ss_pred hhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Ccccceec--CCHhHHHHHHH
Q 002984 769 MFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l--~d~~eV~~~L~ 837 (861)
| ..|.++||+.||.++++.|+. ++++|++ +..|+.++ ++...+.+.++
T Consensus 602 ----G---~vVam~GDGvNDapALk~AdV--------------GIAmg~gtdvAk~aADiVLldd~~~~I~~ai~ 655 (867)
T TIGR01524 602 ----G---HTVGFLGDGINDAPALRKADV--------------GISVDTAADIAKEASDIILLEKSLMVLEEGVI 655 (867)
T ss_pred ----C---CEEEEECCCcccHHHHHhCCE--------------EEEeCCccHHHHHhCCEEEecCChHHHHHHHH
Confidence 3 479999999999999999985 7888864 46677776 34555555444
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.04 Score=54.75 Aligned_cols=48 Identities=27% Similarity=0.413 Sum_probs=36.8
Q ss_pred cccccCCHHHHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHh
Q 002984 572 PSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTL 623 (861)
Q Consensus 572 ~~f~~l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L 623 (861)
++|..++.+.- .-++..+|.++||.|+||+.. ....++++..+.++++
T Consensus 24 ~si~~I~~~~~--~Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l 71 (168)
T PF09419_consen 24 PSIRDIDFEAN--HLKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNEL 71 (168)
T ss_pred CChhhCCcchh--hhhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHH
Confidence 34555665441 135678999999999999974 5678899999999998
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=94.47 E-value=1.1 Score=47.99 Aligned_cols=58 Identities=14% Similarity=0.222 Sum_probs=42.1
Q ss_pred EecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC
Q 002984 751 VKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK 818 (861)
Q Consensus 751 I~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 818 (861)
+.-.|.+||.++..+++++ |..|+.|++|-|+...+.-++.+=.. .+-.++|+.....
T Consensus 156 lft~~~~KG~~L~~fL~~~---~~~pk~IIfIDD~~~nl~sv~~a~k~-------~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 156 LFTGGQDKGEVLKYFLDKI---NQSPKKIIFIDDNKENLKSVEKACKK-------SGIDFIGFHYTGA 213 (252)
T ss_pred EEeCCCccHHHHHHHHHHc---CCCCCeEEEEeCCHHHHHHHHHHHhh-------CCCcEEEEEEcch
Confidence 3445788999999999999 99999999999997665544433221 2234678877654
|
The function is not known. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.37 Score=60.89 Aligned_cols=137 Identities=15% Similarity=0.215 Sum_probs=88.2
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHH
Q 002984 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPV 688 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i 688 (861)
..++-+++.++++++ ++.|+.++++||=+......+.++ +|+. .+.. ....+
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~aIA~~---lGI~--~~~v------------i~G~e---------- 599 (903)
T PRK15122 548 LDPPKESAAPAIAAL-RENGVAVKVLTGDNPIVTAKICRE---VGLE--PGEP------------LLGTE---------- 599 (903)
T ss_pred cCccHHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH---cCCC--CCCc------------cchHh----------
Confidence 446779999999998 899999999999999999999854 4442 1100 00000
Q ss_pred HHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHH
Q 002984 689 MRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVR 768 (861)
Q Consensus 689 ~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~ 768 (861)
++.+ + .+++.+.+ .+. .-+-.+.|.. |...++.+-++
T Consensus 600 l~~~-----------------------~-------~~el~~~v----~~~-------~VfAr~sPe~--K~~iV~~Lq~~ 636 (903)
T PRK15122 600 IEAM-----------------------D-------DAALAREV----EER-------TVFAKLTPLQ--KSRVLKALQAN 636 (903)
T ss_pred hhhC-----------------------C-------HHHHHHHh----hhC-------CEEEEeCHHH--HHHHHHHHHhC
Confidence 0000 0 01222222 211 1234566654 88888877542
Q ss_pred hhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Ccccceec--CCHhHHHHHHH
Q 002984 769 MFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l--~d~~eV~~~L~ 837 (861)
| .-|.++||+.||.++++.|+. +++||++ +..|+.++ ++...+.+.++
T Consensus 637 ----G---~vVamtGDGvNDaPALk~ADV--------------GIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 637 ----G---HTVGFLGDGINDAPALRDADV--------------GISVDSGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred ----C---CEEEEECCCchhHHHHHhCCE--------------EEEeCcccHHHHHhcCEEEecCChHHHHHHHH
Confidence 3 469999999999999999985 7888864 56777776 45555555544
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=94.44 E-value=2.1 Score=48.44 Aligned_cols=252 Identities=17% Similarity=0.215 Sum_probs=131.8
Q ss_pred HcCCCCCEEEEeCccc--ccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHH
Q 002984 194 VINPDDDCVWVHDYHL--MVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLS 271 (861)
Q Consensus 194 ~~~p~~D~VwvhDyhl--~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~ 271 (861)
..+| |+|..=||-= +-+...+|++.++.|+.+|.- |.+|.==++|-..++.. +|.+- -.+.+-..|..
T Consensus 80 ~~~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI~-----PqvWAWr~~R~~~i~~~--~D~ll-~ifPFE~~~y~ 149 (373)
T PF02684_consen 80 EEKP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS-----PQVWAWRPGRAKKIKKY--VDHLL-VIFPFEPEFYK 149 (373)
T ss_pred HcCC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC-----CceeeeCccHHHHHHHH--Hhhee-ECCcccHHHHh
Confidence 3467 7888778863 457889999998888877762 44443334555555443 33321 11222223332
Q ss_pred HHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc--CCCeE--EEeecCcccc-
Q 002984 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKL--ILGIDDMDIF- 346 (861)
Q Consensus 272 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~v--il~Vdrld~~- 346 (861)
+.| +-..|-|+.. +|. ....+.. ...++.+ .++++ +|-=+|-...
T Consensus 150 ------------~~g-~~~~~VGHPl--------~d~-----~~~~~~~----~~~~~~~l~~~~~iIaLLPGSR~~EI~ 199 (373)
T PF02684_consen 150 ------------KHG-VPVTYVGHPL--------LDE-----VKPEPDR----AEAREKLLDPDKPIIALLPGSRKSEIK 199 (373)
T ss_pred ------------ccC-CCeEEECCcc--------hhh-----hccCCCH----HHHHHhcCCCCCcEEEEeCCCCHHHHH
Confidence 111 1244555532 111 1111111 1122222 33433 3445676544
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHH
Q 002984 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (861)
Q Consensus 347 KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~a 426 (861)
+.++..++|.+++.+++|+++ ++....+. . ....+.+..... +. + .+++.. ..+...
T Consensus 200 rllP~~l~aa~~l~~~~p~l~----fvvp~a~~-----~---~~~~i~~~~~~~----~~-~-~~~~~~-----~~~~~~ 256 (373)
T PF02684_consen 200 RLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE-----V---HEELIEEILAEY----PP-D-VSIVII-----EGESYD 256 (373)
T ss_pred HHHHHHHHHHHHHHHhCCCeE----EEEecCCH-----H---HHHHHHHHHHhh----CC-C-CeEEEc-----CCchHH
Confidence 455888999999999999976 55444321 1 112222222221 11 1 122222 246778
Q ss_pred HHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCCCc-----eEeCCCCHHH
Q 002984 427 YYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGA-----IRVNPWDIDA 501 (861)
Q Consensus 427 ly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a-----i~vnP~d~~~ 501 (861)
.++.||+.+++| |.+.+|++..+.|.--.=+..-.+. -=.-.+|-..+.|....+-+. ++-+--+++.
T Consensus 257 ~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~--~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~ 329 (373)
T PF02684_consen 257 AMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTY--FIAKRLVKVKYISLPNIIAGREVVPELIQEDATPEN 329 (373)
T ss_pred HHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHH--HHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHH
Confidence 899999999999 8899999988665200000000000 000112235566666666331 3445567899
Q ss_pred HHHHHHHHhcCCHH
Q 002984 502 VADAMTLAINMRDS 515 (861)
Q Consensus 502 ~A~ai~~aL~m~~~ 515 (861)
+++++...|..++.
T Consensus 330 i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 330 IAAELLELLENPEK 343 (373)
T ss_pred HHHHHHHHhcCHHH
Confidence 99999999985443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.18 Score=59.51 Aligned_cols=59 Identities=8% Similarity=0.088 Sum_probs=41.3
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
..+.+++=+|++++..-.....+-+.+.++++.| ++.|+.++++||........+.+.+
T Consensus 326 g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l-~~~gi~~~~ltGD~~~~a~~ia~~l 384 (499)
T TIGR01494 326 GLRVLAVASKETLLGLLGLEDPLRDDAKETISEL-REAGIRVIMLTGDNVLTAKAIAKEL 384 (499)
T ss_pred CCEEEEEEECCeEEEEEEecCCCchhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 3444444455555542112445678888888888 6789999999999999999887543
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.19 Score=64.48 Aligned_cols=149 Identities=15% Similarity=0.197 Sum_probs=88.5
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHH
Q 002984 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPV 688 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i 688 (861)
..++-+++.++++++ ++.|++++++||........+.+. +|+...+... . ....
T Consensus 644 ~Dp~r~~v~~aI~~l-~~aGIkv~MiTGD~~~tA~~iA~~---~Gi~~~~~~~--~-~~~~------------------- 697 (1053)
T TIGR01523 644 YDPPRNESAGAVEKC-HQAGINVHMLTGDFPETAKAIAQE---VGIIPPNFIH--D-RDEI------------------- 697 (1053)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHH---cCCCCccccc--c-cccc-------------------
Confidence 446778999999998 899999999999999999999854 4554322110 0 0000
Q ss_pred HHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHH
Q 002984 689 MRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVR 768 (861)
Q Consensus 689 ~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~ 768 (861)
.. .....- +++.....+++ .+..... . -+-.+.|. .|...++.+.+.
T Consensus 698 --------~~--------~~vitG----~~l~~l~~~~l----~~~~~~~--~-----V~ar~sP~--~K~~iV~~lq~~ 744 (1053)
T TIGR01523 698 --------MD--------SMVMTG----SQFDALSDEEV----DDLKALC--L-----VIARCAPQ--TKVKMIEALHRR 744 (1053)
T ss_pred --------cc--------ceeeeh----HHhhhcCHHHH----HHHhhcC--e-----EEEecCHH--HHHHHHHHHHhc
Confidence 00 000000 00000001111 1112111 1 12244554 488888877543
Q ss_pred hhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC-C----CcccceecC--CHhHHHHHHH
Q 002984 769 MFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR-K----PSKAKYYLD--DATDVLKLLQ 837 (861)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~----~s~Aky~l~--d~~eV~~~L~ 837 (861)
| ..|.++||+.||.+|++.|+. +|++|. + +..|++++. +...+.+++.
T Consensus 745 ----g---~~Vam~GDGvNDapaLk~AdV--------------GIAmg~~gt~vak~aADivl~dd~f~~I~~~i~ 799 (1053)
T TIGR01523 745 ----K---AFCAMTGDGVNDSPSLKMANV--------------GIAMGINGSDVAKDASDIVLSDDNFASILNAIE 799 (1053)
T ss_pred ----C---CeeEEeCCCcchHHHHHhCCc--------------cEecCCCccHHHHHhcCEEEecCCHHHHHHHHH
Confidence 3 468999999999999999986 677873 2 467888873 4666665543
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.17 Score=53.77 Aligned_cols=85 Identities=25% Similarity=0.527 Sum_probs=58.2
Q ss_pred HHHHHHHHHcCC---CCCEEEEeCcccccHHHHHHhhcC------CCeEEEEEecC-C----CChHHHhc--CCch----
Q 002984 186 IFADKVMEVINP---DDDCVWVHDYHLMVLPTFLRKRFN------RIKLGFFLHSP-F----PSSEIYRT--LPVR---- 245 (861)
Q Consensus 186 ~fa~~v~~~~~p---~~D~VwvhDyhl~llp~~lr~~~~------~~~i~~flH~P-f----P~~e~f~~--lp~r---- 245 (861)
.|+.++++.++. .-|+|++||.|-.++|.+|++... ++++.|.+|-. | |. +.+.. +|+.
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~~~~~~~ 196 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLPDEYFQN 196 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-GGGGS-S
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCCHHHhcc
Confidence 444444444421 239999999999999999998764 59999999952 2 32 22221 2321
Q ss_pred ----------HHHHHHhhcCCEEeecChHhHHHHHH
Q 002984 246 ----------DEILRGLLNCDLIGFHTFDYARHFLS 271 (861)
Q Consensus 246 ----------~~il~~ll~~dligF~t~~~~~~Fl~ 271 (861)
.-+--|+..||.|-.-++.|++.-++
T Consensus 197 ~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 197 LDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp TTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred ccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 35678899999999999999886654
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.044 Score=58.81 Aligned_cols=54 Identities=24% Similarity=0.337 Sum_probs=40.4
Q ss_pred ccceEEEecCCccccCCCC-------C----------------CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHH
Q 002984 589 TERRAIFLDYDGTVVPETS-------I----------------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS 643 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~-------~----------------~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~ 643 (861)
.+..+|+||+|+|+++..+ . ...+-+.+.+.|+.+ +..|..++++|+|+.....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L-~~~G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYA-NSKGVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHH-HHCCCeEEEEeCCCcchHH
Confidence 3567999999999997321 0 112447778899998 7899999999999855444
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.54 Score=47.59 Aligned_cols=60 Identities=23% Similarity=0.290 Sum_probs=47.7
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCce
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGI 654 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgl 654 (861)
..|-+++|+-|||-. .+. ..+...++|+.| ++++..|=++|.-+.++-..+.+++.++|+
T Consensus 6 ~v~gvLlDlSGtLh~---e~~-avpga~eAl~rL-r~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 6 AVKGVLLDLSGTLHI---EDA-AVPGAVEALKRL-RDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred ccceEEEeccceEec---ccc-cCCCHHHHHHHH-HhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 467899999999998 444 567888999999 889999999998887777666665555554
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.084 Score=51.75 Aligned_cols=70 Identities=17% Similarity=0.291 Sum_probs=46.6
Q ss_pred EEEecCCccccCCCC--------CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChh---hHHHHhccccCCceEecCcEE
Q 002984 593 AIFLDYDGTVVPETS--------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRS---SLSEWLAPCEMLGIAAEHGYF 661 (861)
Q Consensus 593 lI~~DlDGTLl~~~~--------~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~---~l~~~~~~~~~lgliaenG~~ 661 (861)
+|++|+|||++.... ......+.+.+..+++ +++|..++-+|+|+.. ..+.|+....+-+..--+|-.
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i-~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv 79 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKI-ADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPV 79 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHH-HHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCE
Confidence 489999999998310 0113457778899998 7999999999999975 444566544333333334444
Q ss_pred EE
Q 002984 662 IR 663 (861)
Q Consensus 662 i~ 663 (861)
+.
T Consensus 80 ~~ 81 (157)
T PF08235_consen 80 LL 81 (157)
T ss_pred EE
Confidence 33
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.012 Score=57.73 Aligned_cols=99 Identities=14% Similarity=0.261 Sum_probs=48.0
Q ss_pred HHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCc-----hHHHHHH-hhcCCEEeecC
Q 002984 189 DKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPV-----RDEILRG-LLNCDLIGFHT 262 (861)
Q Consensus 189 ~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~-----r~~il~~-ll~~dligF~t 262 (861)
.++++..+| |+|++|.++...+...... +.++.+++|.+++.........+ ...+.+. .-.+|.+-.-+
T Consensus 73 ~~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS 147 (177)
T PF13439_consen 73 RRLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVS 147 (177)
T ss_dssp HHHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESS
T ss_pred HHHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEEC
Confidence 344455577 8999999887765544333 78999999988853111111111 1111111 23567775555
Q ss_pred hHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHH
Q 002984 263 FDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLE 312 (861)
Q Consensus 263 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~ 312 (861)
..-++.+.+ .|+ ...++.++|+|||.+.|+
T Consensus 148 ~~~~~~l~~-----~~~---------------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 148 ESTKDELIK-----FGI---------------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHHHHH-----hCC---------------cccCCEEEECCccHHHcC
Confidence 544443332 122 113678899999999873
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.34 Score=61.37 Aligned_cols=41 Identities=17% Similarity=0.362 Sum_probs=35.8
Q ss_pred CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002984 608 IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 608 ~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
...+|-+++.++++.+ ++.|+.++++||=.......+.+++
T Consensus 544 ~~Dppr~~v~~aI~~l-~~AGI~v~MiTGD~~~TA~aIa~~~ 584 (917)
T COG0474 544 IEDPPREDVKEAIEEL-REAGIKVWMITGDHVETAIAIAKEC 584 (917)
T ss_pred ccCCCCccHHHHHHHH-HHCCCcEEEECCCCHHHHHHHHHHc
Confidence 3445778999999998 8999999999999999999998654
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.1 Score=55.56 Aligned_cols=50 Identities=18% Similarity=0.311 Sum_probs=38.5
Q ss_pred ceEEEecCCccccCCCC-----------------C-------CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhh
Q 002984 591 RRAIFLDYDGTVVPETS-----------------I-------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS 641 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~-----------------~-------~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~ 641 (861)
+-+++||+|+|+++..+ . ..++-+.+++.++.+ ++.|..|+++|||+...
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l-~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKL-VSLGFKIIFLSGRLKDK 174 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHH-HHCCCEEEEEeCCchhH
Confidence 46899999999994110 0 223457888899998 79999999999998654
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=92.89 E-value=4.3 Score=45.38 Aligned_cols=292 Identities=14% Similarity=0.122 Sum_probs=142.8
Q ss_pred HhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcc--cccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHh
Q 002984 175 VLWQAYVSANKIFADKVMEVINPDDDCVWVHDYH--LMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGL 252 (861)
Q Consensus 175 ~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyh--l~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~l 252 (861)
..|..|++.=+.+ .+ -+| |++..=||- =..|...||+..|+.||..+.- +.+| .||+.=...+
T Consensus 69 ~llk~~~~~~~~i----~~-~kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~-----PsVW---AWr~~Ra~~i 133 (381)
T COG0763 69 RLLKIRRELVRYI----LA-NKP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS-----PSVW---AWRPKRAVKI 133 (381)
T ss_pred HHHHHHHHHHHHH----Hh-cCC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC-----ccee---eechhhHHHH
Confidence 4566665544433 22 256 777776665 2457889999999999998873 3333 3443333222
Q ss_pred h-cCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc
Q 002984 253 L-NCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF 331 (861)
Q Consensus 253 l-~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~ 331 (861)
. .+|++.--.+ +-..|... .|+ -..|-|++. .|.-.+. + ..+..|+++
T Consensus 134 ~~~~D~lLailP-FE~~~y~k----~g~---------~~~yVGHpl--------~d~i~~~-----~----~r~~ar~~l 182 (381)
T COG0763 134 AKYVDHLLAILP-FEPAFYDK----FGL---------PCTYVGHPL--------ADEIPLL-----P----DREAAREKL 182 (381)
T ss_pred HHHhhHeeeecC-CCHHHHHh----cCC---------CeEEeCChh--------hhhcccc-----c----cHHHHHHHh
Confidence 2 2454432211 11222220 011 123444432 1111111 1 112244444
Q ss_pred ----CCCeEEEee--cCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccC
Q 002984 332 ----DGKKLILGI--DDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYG 405 (861)
Q Consensus 332 ----~~~~vil~V--drld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~ 405 (861)
..+.+.+-- -|=+...-++..++|++++.+++|+++ ++.-..+ ..++.++.+... .
T Consensus 183 ~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~~~~---~------ 244 (381)
T COG0763 183 GIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEEALK---W------ 244 (381)
T ss_pred CCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHHHhh---c------
Confidence 334443332 234556667788899999999999988 5543322 233333333221 1
Q ss_pred CCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCc
Q 002984 406 SPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (861)
Q Consensus 406 ~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (861)
....+.+++ ...+....+.+||+.+..| |.+.+|++.|+.|..-.-+..-...- =.-.+|-.-+.+..
T Consensus 245 -~~~~~~~~~----~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~Vv~Yk~~~it~~--iak~lvk~~yisLp 312 (381)
T COG0763 245 -EVAGLSLIL----IDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMVVAYKVKPITYF--IAKRLVKLPYVSLP 312 (381)
T ss_pred -cccCceEEe----cCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEEEEEeccHHHHH--HHHHhccCCcccch
Confidence 010122222 2457888899999999999 88999999996652000000000000 00001112233333
Q ss_pred ccCCCceEe-----CCCCHHHHHHHHHHHhcCCHH--HHHHHHHHhhhhhccCCHhHHHHHHHH
Q 002984 486 PSLSGAIRV-----NPWDIDAVADAMTLAINMRDS--EKQLRHEKHYRYVSTHDVAYWARSFAQ 542 (861)
Q Consensus 486 ~~l~~ai~v-----nP~d~~~~A~ai~~aL~m~~~--e~~~r~~~~~~~v~~~~~~~W~~~fl~ 542 (861)
..+-+..+| .--.++.+|+++...+..+.. +.....+.+++++.+..+..-+.+.+-
T Consensus 313 NIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~vl 376 (381)
T COG0763 313 NILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQAVL 376 (381)
T ss_pred HHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 333222111 112358899999988875521 223344455555555534444444433
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=92.26 E-value=0.019 Score=60.37 Aligned_cols=74 Identities=18% Similarity=0.226 Sum_probs=48.0
Q ss_pred ccceEEEecCCccccCCCC-----------------------CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHH
Q 002984 589 TERRAIFLDYDGTVVPETS-----------------------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEW 645 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~-----------------------~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~ 645 (861)
.+..+|+||+|+|+++... .....-+.+++.++.+ .+.|..|+++|||+...-..-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~-~~~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYA-RSRGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHH-HHTTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHH-HHCCCeEEEEecCCchhHHHH
Confidence 4567999999999986110 0112346688899998 799999999999998744433
Q ss_pred hccccCCceEecCcEEEE
Q 002984 646 LAPCEMLGIAAEHGYFIR 663 (861)
Q Consensus 646 ~~~~~~lgliaenG~~i~ 663 (861)
...+...|+....+.+++
T Consensus 149 ~~nL~~~G~~~~~~l~lr 166 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILR 166 (229)
T ss_dssp HHHHHHHTTSTBSCGEEE
T ss_pred HHHHHHcCCCccchhccc
Confidence 333334444333444444
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=92.25 E-value=3.2 Score=45.47 Aligned_cols=168 Identities=15% Similarity=0.205 Sum_probs=107.2
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHhC---CCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCc
Q 002984 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQH---PGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~---P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~ 409 (861)
...++++--...+...+.-+|.|++..-++. +.---++ |.+|+ |.||..+.+.++|++ ..|
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~l-lciIT----GKGPlkE~Y~~~I~~-----------~~~ 317 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSL-LCIIT----GKGPLKEKYSQEIHE-----------KNL 317 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcE-EEEEc----CCCchhHHHHHHHHH-----------hcc
Confidence 4578888889999999999999998542221 1001122 33344 377887888888875 457
Q ss_pred ccEEEEcCCCCHHHHHHHHHhccc--ceecccccCCCCcc--eeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCc
Q 002984 410 EPVVLIDRPVPRFEKSAYYAVAEC--CIVNAVRDGMNLVP--YKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (861)
Q Consensus 410 ~pvv~~~~~v~~~el~aly~~ADv--~vvtS~~EG~nLv~--~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (861)
+.|.+..--++-++...++..||. |+=|| .-|+-|+- ..-.-| +-|+++-.|. |-
T Consensus 318 ~~v~~~tpWL~aEDYP~ll~saDlGVcLHtS-SSGLDLPMKVVDMFGc-------------------glPvcA~~fk-cl 376 (444)
T KOG2941|consen 318 QHVQVCTPWLEAEDYPKLLASADLGVCLHTS-SSGLDLPMKVVDMFGC-------------------GLPVCAVNFK-CL 376 (444)
T ss_pred cceeeeecccccccchhHhhccccceEeeec-CcccCcchhHHHhhcC-------------------CCceeeecch-hH
Confidence 777777878899999999999996 45555 34555543 233333 2345555554 55
Q ss_pred ccC----CCceEeCCCCHHHHHHHHHHHhcC---CHHHHHHHHHHhhhhhccCCHhHHHHHHHHH
Q 002984 486 PSL----SGAIRVNPWDIDAVADAMTLAINM---RDSEKQLRHEKHYRYVSTHDVAYWARSFAQD 543 (861)
Q Consensus 486 ~~l----~~ai~vnP~d~~~~A~ai~~aL~m---~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~ 543 (861)
.+| .+|++++ |.+++|+.|..+.+- +..+-. +..+.+.+....+|.+++-+-
T Consensus 377 ~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~----~lkkn~~e~~e~RW~~~W~~~ 435 (444)
T KOG2941|consen 377 DELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELN----QLKKNLREEQELRWDESWERT 435 (444)
T ss_pred HHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHH----HHHHhhHHHHhhhHHHHHHHh
Confidence 555 4588886 799999999998872 222221 223333344557777766543
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=91.75 E-value=4.9 Score=45.42 Aligned_cols=73 Identities=14% Similarity=0.095 Sum_probs=50.4
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-C
Q 002984 411 PVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S 489 (861)
Q Consensus 411 pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~ 489 (861)
|.+.+.++++..++.++++.|+++|-.|- =++ .||.+.+.| +|. .|-.++. .
T Consensus 262 ~~v~l~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg~P-------------------vv~---l~~R~e~~~ 314 (365)
T TIGR03568 262 PNFRLFKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFGVP-------------------TIN---IGTRQKGRL 314 (365)
T ss_pred CCEEEECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcCCC-------------------EEe---ecCCchhhh
Confidence 44677889999999999999999884442 122 799998554 331 1223333 2
Q ss_pred -C-c-eEeCCCCHHHHHHHHHHHhc
Q 002984 490 -G-A-IRVNPWDIDAVADAMTLAIN 511 (861)
Q Consensus 490 -~-a-i~vnP~d~~~~A~ai~~aL~ 511 (861)
| . +.| +.|.+++.+++.++++
T Consensus 315 ~g~nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 315 RADSVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred hcCeEEEe-CCCHHHHHHHHHHHhC
Confidence 2 3 446 7799999999999654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=91.60 E-value=1.2 Score=50.90 Aligned_cols=138 Identities=12% Similarity=0.091 Sum_probs=79.4
Q ss_pred CeEEEeecC-cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhh---------c
Q 002984 334 KKLILGIDD-MDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINE---------V 403 (861)
Q Consensus 334 ~~vil~Vdr-ld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~---------~ 403 (861)
..++++-+| =+..++++..++|++++.++ |++ .++....+. .+++.+++.+.+. .++. .
T Consensus 207 ~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~----~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 207 RIALLPGSRPPEAYRNLKLLLRALEALPDS-QPF----VFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSL 275 (396)
T ss_pred EEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCe----EEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchh
Confidence 355677888 55667888999999998655 543 355444232 2334444433211 0000 0
Q ss_pred cCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCC
Q 002984 404 YGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG 483 (861)
Q Consensus 404 ~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 483 (861)
|.. .++.++. ...+...+|+.||++|..| |-+..|+++++.| .|+--+.+
T Consensus 276 ~~~---~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P-------------------~Ilip~~~ 325 (396)
T TIGR03492 276 FQK---GTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGKP-------------------VIQLPGKG 325 (396)
T ss_pred hcc---CceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCCC-------------------EEEEeCCC
Confidence 000 0122211 2457889999999999886 3555999998654 23322111
Q ss_pred C------ccc---C-CCceEeCCCCHHHHHHHHHHHhcC
Q 002984 484 C------SPS---L-SGAIRVNPWDIDAVADAMTLAINM 512 (861)
Q Consensus 484 ~------~~~---l-~~ai~vnP~d~~~~A~ai~~aL~m 512 (861)
- .+. + .+++.+...+.+.++++|.+.|+.
T Consensus 326 ~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d 364 (396)
T TIGR03492 326 PQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLAD 364 (396)
T ss_pred CHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcC
Confidence 1 011 1 345555567789999999999873
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=91.21 E-value=9.2 Score=43.42 Aligned_cols=74 Identities=14% Similarity=0.157 Sum_probs=48.3
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCC----ccc
Q 002984 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC----SPS 487 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~----~~~ 487 (861)
-+.+.+.+|+.+ ++..||++| .+-|+| +..|+++++.| +|+--+.+- +..
T Consensus 289 ~v~~~~~~p~~~---ll~~~d~~I---~hgG~~-t~~eal~~GvP-------------------~v~~P~~~dQ~~~a~~ 342 (401)
T cd03784 289 NVRVVDFVPHDW---LLPRCAAVV---HHGGAG-TTAAALRAGVP-------------------QLVVPFFGDQPFWAAR 342 (401)
T ss_pred ceEEeCCCCHHH---Hhhhhheee---ecCCch-hHHHHHHcCCC-------------------EEeeCCCCCcHHHHHH
Confidence 345666777655 477799998 566765 67899999654 444333331 111
Q ss_pred C---CCceEeCCC--CHHHHHHHHHHHhc
Q 002984 488 L---SGAIRVNPW--DIDAVADAMTLAIN 511 (861)
Q Consensus 488 l---~~ai~vnP~--d~~~~A~ai~~aL~ 511 (861)
+ +-|+.+++. +.+++++++.++|+
T Consensus 343 ~~~~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 343 VAELGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred HHHCCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 2 225555554 68999999999997
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=90.55 E-value=3.5 Score=41.22 Aligned_cols=47 Identities=15% Similarity=0.236 Sum_probs=32.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 746 QHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 746 ~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
-.++||.|. +|-.-.+.|.+.. |+++++++.|=|...-.+--+..|.
T Consensus 99 F~~~eI~~g--sK~~Hf~~i~~~t---gI~y~eMlFFDDe~~N~~~v~~lGV 145 (169)
T PF12689_consen 99 FDYLEIYPG--SKTTHFRRIHRKT---GIPYEEMLFFDDESRNIEVVSKLGV 145 (169)
T ss_dssp ECEEEESSS---HHHHHHHHHHHH------GGGEEEEES-HHHHHHHHTTT-
T ss_pred cchhheecC--chHHHHHHHHHhc---CCChhHEEEecCchhcceeeEecCc
Confidence 356899996 8999999999998 9999999999997655555555654
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.05 E-value=1.5 Score=53.03 Aligned_cols=56 Identities=18% Similarity=0.329 Sum_probs=45.4
Q ss_pred HHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002984 586 YRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 586 y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
|......|.|+-+=|-+=| |-+++.++++.+ ++.|+.|..+||-.......+.+++
T Consensus 566 ~~~~E~~LtFvGlVGi~DP-------PR~ev~~ai~~c-~~aGIrV~mITGD~~~TA~AI~r~i 621 (972)
T KOG0202|consen 566 RATAESDLTFVGLVGILDP-------PRPEVADAIELC-RQAGIRVIMITGDNKETAEAIAREI 621 (972)
T ss_pred ccccccceEEEEEeeccCC-------CchhHHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHHHh
Confidence 3344567888887665544 779999999997 8999999999999999999998543
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=89.79 E-value=1.9 Score=49.89 Aligned_cols=101 Identities=18% Similarity=0.251 Sum_probs=59.8
Q ss_pred CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 002984 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (861)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~p 411 (861)
++..++.+..++ .|=-+..+..+.++|+.-|+-+ |++...|.. +. +.++ +.+++ +|- .-.-
T Consensus 283 ~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~~--~~--~~l~----~~~~~----~Gv-~~~R 343 (468)
T PF13844_consen 283 EDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPAS--GE--ARLR----RRFAA----HGV-DPDR 343 (468)
T ss_dssp SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETSTT--HH--HHHH----HHHHH----TTS--GGG
T ss_pred CCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCHH--HH--HHHH----HHHHH----cCC-Chhh
Confidence 566666667776 4556899999999999999866 766665431 11 2222 22222 232 2222
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeee
Q 002984 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVC 453 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac 453 (861)
+ .|.+..+.+|..+.|+.+|||+-|..+-|- .+.+||+.+
T Consensus 344 i-~f~~~~~~~ehl~~~~~~DI~LDT~p~nG~-TTt~dALwm 383 (468)
T PF13844_consen 344 I-IFSPVAPREEHLRRYQLADICLDTFPYNGG-TTTLDALWM 383 (468)
T ss_dssp E-EEEE---HHHHHHHGGG-SEEE--SSS--S-HHHHHHHHH
T ss_pred E-EEcCCCCHHHHHHHhhhCCEEeeCCCCCCc-HHHHHHHHc
Confidence 4 456677889999999999999999877774 577899998
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=89.63 E-value=41 Score=37.96 Aligned_cols=137 Identities=15% Similarity=0.144 Sum_probs=84.4
Q ss_pred CeEEEeecCcccc-cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002984 334 KKLILGIDDMDIF-KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (861)
Q Consensus 334 ~~vil~Vdrld~~-KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pv 412 (861)
+-+++..-|-.-. +++...+.|+.++++++|+.. +|.-..| | +.+++.. +.+++. .+.
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----viyp~H~-~---~~v~e~~----------~~~L~~---~~~ 263 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VIYPVHP-R---PRVRELV----------LKRLKN---VER 263 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EEEeCCC-C---hhhhHHH----------HHHhCC---CCc
Confidence 4566777777665 999999999999999998865 3322222 1 3333322 112222 233
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC-C-
Q 002984 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-G- 490 (861)
Q Consensus 413 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~- 490 (861)
+.+..++...+...|...|-+.+--| |=.--||-.-+.| ++++=+.+.=.+.+. |
T Consensus 264 v~li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~P------------------vl~lR~~TERPE~v~agt 320 (383)
T COG0381 264 VKLIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGKP------------------VLVLRDTTERPEGVEAGT 320 (383)
T ss_pred EEEeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCCc------------------EEeeccCCCCccceecCc
Confidence 55666899999999999996555444 2223344444222 344444444444443 3
Q ss_pred ceEeCCCCHHHHHHHHHHHhcCCHH
Q 002984 491 AIRVNPWDIDAVADAMTLAINMRDS 515 (861)
Q Consensus 491 ai~vnP~d~~~~A~ai~~aL~m~~~ 515 (861)
.++|++ |.+.+.+++..+++.++.
T Consensus 321 ~~lvg~-~~~~i~~~~~~ll~~~~~ 344 (383)
T COG0381 321 NILVGT-DEENILDAATELLEDEEF 344 (383)
T ss_pred eEEeCc-cHHHHHHHHHHHhhChHH
Confidence 356654 789999999999986544
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=88.38 E-value=0.72 Score=48.05 Aligned_cols=63 Identities=16% Similarity=0.067 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccceecCCHhH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDDATD 831 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d~~e 831 (861)
+......+++++...|++++++++|||+..|+.+.+.+|.. +++|+.|... ..+++++++..+
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~d~vi~~~~e 205 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMS-----------VVMVPDPRLDKSYCKGADQVLSSLLD 205 (220)
T ss_pred CcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCe-----------EEEEeCCCCcHhhhhchhhHhcCHhh
Confidence 66788888898811128899999999999999999999973 4566555321 245566666655
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=87.59 E-value=0.25 Score=48.57 Aligned_cols=57 Identities=23% Similarity=0.276 Sum_probs=38.5
Q ss_pred eEEEecCCccccCCCCCCCC----------------CCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc
Q 002984 592 RAIFLDYDGTVVPETSIIKS----------------PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE 650 (861)
Q Consensus 592 klI~~DlDGTLl~~~~~~~~----------------~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~ 650 (861)
|++++|+||||+........ .-|.+.+.|+.+ .+...++|.|..+...+..++..+.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l--~~~~ev~i~T~~~~~ya~~v~~~ld 73 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEEL--SKHYEVVIWTSASEEYAEPVLDALD 73 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHH--HHHCEEEEE-SS-HHHHHHHHHHHT
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHH--HHhceEEEEEeehhhhhhHHHHhhh
Confidence 68999999999984321110 236777778877 3558999999999988888876653
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=87.19 E-value=56 Score=36.64 Aligned_cols=259 Identities=16% Similarity=0.077 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhh--cCCE
Q 002984 180 YVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDL 257 (861)
Q Consensus 180 Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll--~~dl 257 (861)
.-.+=..|++.+ +..+| |+|.||.=-.-.|..-+-....+++|+.. |---=+.| .+-|.-+|+.|-+. -||+
T Consensus 52 ~~~~~~~~~~~~-~~~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d--~~~g~~de~~R~~i~~la~l 125 (346)
T PF02350_consen 52 TGLAIIELADVL-EREKP--DAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGD--RTEGMPDEINRHAIDKLAHL 125 (346)
T ss_dssp HHHHHHHHHHHH-HHHT---SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S---TTSSTTHHHHHHHHHHH-SE
T ss_pred HHHHHHHHHHHH-HhcCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCccc--cCCCCchhhhhhhhhhhhhh
Confidence 333344444444 44488 89999988887777777666667775533 21100111 11233445544442 2677
Q ss_pred EeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEE
Q 002984 258 IGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLI 337 (861)
Q Consensus 258 igF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vi 337 (861)
----|..+.++.++ .|.+. ++ +.. +-.+++|.-........+... ...+.....++.++
T Consensus 126 hf~~t~~~~~~L~~-----~G~~~--~r----I~~--------vG~~~~D~l~~~~~~~~~~~~--~~~i~~~~~~~~iL 184 (346)
T PF02350_consen 126 HFAPTEEARERLLQ-----EGEPP--ER----IFV--------VGNPGIDALLQNKEEIEEKYK--NSGILQDAPKPYIL 184 (346)
T ss_dssp EEESSHHHHHHHHH-----TT--G--GG----EEE-----------HHHHHHHHHHHTTCC-HH--HHHHHHCTTSEEEE
T ss_pred hccCCHHHHHHHHh-----cCCCC--Ce----EEE--------EChHHHHHHHHhHHHHhhhhh--hHHHHhccCCCEEE
Confidence 66677777777765 24321 11 111 124566654332211111110 11222223445556
Q ss_pred EeecCcccc---cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEE
Q 002984 338 LGIDDMDIF---KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVL 414 (861)
Q Consensus 338 l~Vdrld~~---KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~ 414 (861)
+..=|.... ......+.+++.+.+. +++. +|....++ +...+.+.+...+ + +-+.
T Consensus 185 vt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~-------p~~~~~i~~~l~~---------~-~~v~ 242 (346)
T PF02350_consen 185 VTLHPVTNEDNPERLEQILEALKALAER-QNVP----VIFPLHNN-------PRGSDIIIEKLKK---------Y-DNVR 242 (346)
T ss_dssp EE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEE----EEEE--S--------HHHHHHHHHHHTT-----------TTEE
T ss_pred EEeCcchhcCChHHHHHHHHHHHHHHhc-CCCc----EEEEecCC-------chHHHHHHHHhcc---------c-CCEE
Confidence 666555433 3466777788888777 5543 44444222 1222222221111 1 1334
Q ss_pred EcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC---CCc
Q 002984 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL---SGA 491 (861)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~a 491 (861)
+..+++..++.++++.|+++|-.|- | +..||..++.| +|.=...|-.++. ...
T Consensus 243 ~~~~l~~~~~l~ll~~a~~vvgdSs--G---I~eEa~~lg~P-------------------~v~iR~~geRqe~r~~~~n 298 (346)
T PF02350_consen 243 LIEPLGYEEYLSLLKNADLVVGDSS--G---IQEEAPSLGKP-------------------VVNIRDSGERQEGRERGSN 298 (346)
T ss_dssp EE----HHHHHHHHHHESEEEESSH--H---HHHHGGGGT---------------------EEECSSS-S-HHHHHTTSE
T ss_pred EECCCCHHHHHHHHhcceEEEEcCc--c---HHHHHHHhCCe-------------------EEEecCCCCCHHHHhhcce
Confidence 5568999999999999999987773 2 23488888443 4544555555555 345
Q ss_pred eEeCCCCHHHHHHHHHHHhcC
Q 002984 492 IRVNPWDIDAVADAMTLAINM 512 (861)
Q Consensus 492 i~vnP~d~~~~A~ai~~aL~m 512 (861)
++|. .|.+++.+||.+++..
T Consensus 299 vlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 299 VLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp EEET-SSHHHHHHHHHHHHH-
T ss_pred EEeC-CCHHHHHHHHHHHHhC
Confidence 6664 8999999999999974
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.42 E-value=4.5 Score=49.63 Aligned_cols=68 Identities=10% Similarity=0.209 Sum_probs=50.4
Q ss_pred HHHHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhc
Q 002984 579 IDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (861)
Q Consensus 579 ~~~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~ 647 (861)
++..++.-.+...-.+.+=+||+|+.--.....+-++...++..| +..|+.+++.||-....+....+
T Consensus 691 i~~~~~~~e~~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~L-k~~Gi~v~mLTGDn~~aA~svA~ 758 (951)
T KOG0207|consen 691 ILDALTESERKGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAEL-KSMGIKVVMLTGDNDAAARSVAQ 758 (951)
T ss_pred HHHhhhhHhhcCceEEEEEECCEEEEEEEeccccchhHHHHHHHH-HhcCceEEEEcCCCHHHHHHHHH
Confidence 444445555667789999999999862223445667888888888 78899999999988888777764
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=86.04 E-value=1.1 Score=45.90 Aligned_cols=58 Identities=16% Similarity=0.164 Sum_probs=42.6
Q ss_pred ccceEEEecCCccccCCCCCCCC----CCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002984 589 TERRAIFLDYDGTVVPETSIIKS----PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~----~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
..+|++++|+|+||++..+.... .-|.+.+.|+.+. +...|+|=|..+...+...+..
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~--~~feIvVwTAa~~~ya~~~l~~ 80 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAY--EDYDIVIWSATSMKWIEIKMTE 80 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHH--hCCEEEEEecCCHHHHHHHHHH
Confidence 45689999999999984322211 2367788888873 4788999998888888877643
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=85.75 E-value=2.7 Score=43.20 Aligned_cols=37 Identities=24% Similarity=0.232 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
|...++.+++.- +++.. ++|+|||.+|.+||+.+...
T Consensus 192 ka~i~e~~~ele---~~d~s-a~~VGDSItDv~ml~~~rgr 228 (315)
T COG4030 192 KAKIMEGYCELE---GIDFS-AVVVGDSITDVKMLEAARGR 228 (315)
T ss_pred hhHHHHHHHhhc---CCCcc-eeEecCcccchHHHHHhhcc
Confidence 666677777654 55544 89999999999999999753
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.63 E-value=3.6 Score=52.39 Aligned_cols=42 Identities=19% Similarity=0.249 Sum_probs=32.2
Q ss_pred EecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002984 751 VKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 751 I~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
.+....-|+..++.+.+. ....++||||+.||..|++.|..+
T Consensus 775 CR~sPlQKA~Vv~lVk~~------~~~~TLAIGDGANDVsMIQ~AhVG 816 (1151)
T KOG0206|consen 775 CRVSPLQKALVVKLVKKG------LKAVTLAIGDGANDVSMIQEAHVG 816 (1151)
T ss_pred ccCCHHHHHHHHHHHHhc------CCceEEEeeCCCccchheeeCCcC
Confidence 333334499999988443 356799999999999999988764
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=85.61 E-value=2.2 Score=45.60 Aligned_cols=59 Identities=19% Similarity=0.300 Sum_probs=46.1
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002984 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
....+|+||+|.||+.......-..+.+.+.|.+| ++.|..+++=|--+.+-+..-+..
T Consensus 120 ~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~L-k~~g~vLvLWSyG~~eHV~~sl~~ 178 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLREL-KEQGCVLVLWSYGNREHVRHSLKE 178 (297)
T ss_pred CCCcEEEEECCCcccccCCccccCChHHHHHHHHH-HHcCCEEEEecCCCHHHHHHHHHH
Confidence 34569999999999984322334679999999999 899999999887777777766644
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=85.54 E-value=1.7 Score=49.46 Aligned_cols=71 Identities=15% Similarity=0.149 Sum_probs=55.6
Q ss_pred CHHHHHHHHHhccceEEEecCCccccCCCC-------------CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHH
Q 002984 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETS-------------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSE 644 (861)
Q Consensus 578 ~~~~~~~~y~~s~~klI~~DlDGTLl~~~~-------------~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~ 644 (861)
.+.+++.+-.....|.+++|+|+||..-.- .....-.+..+.+..| .++|+.++|||-.....+++
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l-~kqGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGL-KKQGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHH-HhccEEEEEecCCchhhHHH
Confidence 456777777778899999999999986210 1123346677788888 89999999999999999999
Q ss_pred Hhccc
Q 002984 645 WLAPC 649 (861)
Q Consensus 645 ~~~~~ 649 (861)
.|..-
T Consensus 288 vF~kh 292 (574)
T COG3882 288 VFRKH 292 (574)
T ss_pred HHhhC
Confidence 98653
|
|
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.93 E-value=1.3 Score=45.49 Aligned_cols=76 Identities=21% Similarity=0.206 Sum_probs=54.3
Q ss_pred eEEEEecCCCCHHHHHHHHHHHhhcCCCC-CCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC--CCcccc
Q 002984 747 HIVEVKPQGVSKGLVAEKVLVRMFNGGRP-PDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR--KPSKAK 823 (861)
Q Consensus 747 ~~vEI~p~gvsKg~al~~ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~s~Ak 823 (861)
.-+-.+| -..|.++.+... |+. |.++++|-||.+-+.--+.+|.. +|-||. +...+.
T Consensus 155 ~~~vcKP----~~~afE~a~k~a---gi~~p~~t~FfDDS~~NI~~ak~vGl~-------------tvlv~~~~~~~~~d 214 (244)
T KOG3109|consen 155 KTVVCKP----SEEAFEKAMKVA---GIDSPRNTYFFDDSERNIQTAKEVGLK-------------TVLVGREHKIKGVD 214 (244)
T ss_pred CceeecC----CHHHHHHHHHHh---CCCCcCceEEEcCchhhHHHHHhccce-------------eEEEEeeecccchH
Confidence 3455555 356888888887 998 99999999999999999999973 566664 456667
Q ss_pred eecCCHhHHHHHHHHHHhh
Q 002984 824 YYLDDATDVLKLLQGLATA 842 (861)
Q Consensus 824 y~l~d~~eV~~~L~~L~~~ 842 (861)
|.+.+.....+.+-.|...
T Consensus 215 ~~l~~ih~~k~a~p~l~~~ 233 (244)
T KOG3109|consen 215 YALEQIHNNKEALPELWEI 233 (244)
T ss_pred HHHHHhhchhhhchHHhhc
Confidence 7666555555555555444
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.49 E-value=1.7 Score=53.29 Aligned_cols=78 Identities=22% Similarity=0.350 Sum_probs=48.6
Q ss_pred ceeeeccCcccccCCHHHHHHHHHhccceEEEecCC--ccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhh
Q 002984 564 GFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYD--GTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS 641 (861)
Q Consensus 564 ~~~~~~~~~~f~~l~~~~~~~~y~~s~~klI~~DlD--GTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~ 641 (861)
||||+|+-. +.|....+.++ .+.++-.+=.|++ |=++- ..++-+++..+|++| ++.++..++|||-+...
T Consensus 663 GfRVIAlA~--K~L~~~~~~~~-~~~~Rd~vEs~l~FlGLiVm----eNkLK~~T~~VI~eL-~~AnIRtVMcTGDNllT 734 (1140)
T KOG0208|consen 663 GFRVIALAS--KELETSTLQKA-QKLSRDTVESNLEFLGLIVM----ENKLKEETKRVIDEL-NRANIRTVMCTGDNLLT 734 (1140)
T ss_pred CeEEEEEec--CccCcchHHHH-hhccHhhhhccceeeEEEEe----ecccccccHHHHHHH-HhhcceEEEEcCCchhe
Confidence 688888764 44555433333 2222223333332 33333 345667788888888 68899999999999887
Q ss_pred HHHHhccc
Q 002984 642 LSEWLAPC 649 (861)
Q Consensus 642 l~~~~~~~ 649 (861)
.-...+++
T Consensus 735 aisVakeC 742 (1140)
T KOG0208|consen 735 AISVAKEC 742 (1140)
T ss_pred eeehhhcc
Confidence 76666543
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=84.23 E-value=7.4 Score=44.19 Aligned_cols=97 Identities=14% Similarity=0.103 Sum_probs=57.0
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcc----cC
Q 002984 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSP----SL 488 (861)
Q Consensus 413 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~----~l 488 (861)
+.+.+.+++. .++..||++|. +-|.| +..|+++++.| +|+.-..+-.+ .+
T Consensus 277 v~~~~~~p~~---~ll~~~~~~I~---hgG~~-t~~Eal~~G~P-------------------~v~~p~~~dq~~~a~~l 330 (392)
T TIGR01426 277 VEVRQWVPQL---EILKKADAFIT---HGGMN-STMEALFNGVP-------------------MVAVPQGADQPMTARRI 330 (392)
T ss_pred eEEeCCCCHH---HHHhhCCEEEE---CCCch-HHHHHHHhCCC-------------------EEecCCcccHHHHHHHH
Confidence 3556677765 56788998885 44766 66999999554 44432222111 11
Q ss_pred ---CCceEeC--CCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccC-CHhHHH
Q 002984 489 ---SGAIRVN--PWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTH-DVAYWA 537 (861)
Q Consensus 489 ---~~ai~vn--P~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~-~~~~W~ 537 (861)
..++.++ ..+.++++++|.++|..+ +.+.+.+++.+.+... .....+
T Consensus 331 ~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa 383 (392)
T TIGR01426 331 AELGLGRHLPPEEVTAEKLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAA 383 (392)
T ss_pred HHCCCEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHH
Confidence 2245554 346799999999999743 3444444444444433 334443
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=84.06 E-value=1.6 Score=43.04 Aligned_cols=60 Identities=17% Similarity=0.120 Sum_probs=44.3
Q ss_pred hccceEEEecCCccccCCCCCC------C--------------------------CCCHHHHHHHHHhhcCCCCeEEEEC
Q 002984 588 KTERRAIFLDYDGTVVPETSII------K--------------------------SPGPEVISVLKTLCSDPNNTVFIVS 635 (861)
Q Consensus 588 ~s~~klI~~DlDGTLl~~~~~~------~--------------------------~~s~~~~~~L~~L~~~~g~~v~I~T 635 (861)
+.++..+++|+|.||++..... . .+-|.+.+.|++++ ++..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~--~~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEAS--KLYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHH--hhcEEEEEe
Confidence 3567889999999999843210 0 01357788999883 558999999
Q ss_pred CCChhhHHHHhccc
Q 002984 636 GRGRSSLSEWLAPC 649 (861)
Q Consensus 636 GR~~~~l~~~~~~~ 649 (861)
..+...+..+++.+
T Consensus 81 ~~~~~yA~~vl~~l 94 (156)
T TIGR02250 81 MGTRAYAQAIAKLI 94 (156)
T ss_pred CCcHHHHHHHHHHh
Confidence 99999888887654
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=84.04 E-value=1.1 Score=42.78 Aligned_cols=67 Identities=18% Similarity=0.154 Sum_probs=39.3
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHH-----HHhhcCCEEeecChHhHHHHHH
Q 002984 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEIL-----RGLLNCDLIGFHTFDYARHFLS 271 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il-----~~ll~~dligF~t~~~~~~Fl~ 271 (861)
|+|++|+++..++..+++++ .++++.+.+|-.+.... .++...++ ..+-.||.|-..+...++.+.+
T Consensus 75 Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 75 DVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred eEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 99999999877777777734 37999999997543221 12222222 3445688888888777766654
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=83.71 E-value=1.9 Score=42.84 Aligned_cols=56 Identities=20% Similarity=0.216 Sum_probs=34.7
Q ss_pred ceEEEecCCccccCCCCCCCC---------------------CCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002984 591 RRAIFLDYDGTVVPETSIIKS---------------------PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~---------------------~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
++.+++|+|+||+........ .-|.+.+.|+.+. + ...++|.|.-+...+..++..
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~-~-~yei~I~Ts~~~~yA~~il~~ 77 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVS-K-WYELVIFTASLEEYADPVLDI 77 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHH-h-cCEEEEEcCCcHHHHHHHHHH
Confidence 357999999999984221100 1245566777762 3 267777777666666666543
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=81.10 E-value=2.2 Score=41.59 Aligned_cols=37 Identities=24% Similarity=0.364 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+..+.+.+++.+ |+++++++.|||+..|+.+.+.+|.
T Consensus 135 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~d~~~A~~~G~ 171 (176)
T PF13419_consen 135 DPDAYRRALEKL---GIPPEEILFVGDSPSDVEAAKEAGI 171 (176)
T ss_dssp SHHHHHHHHHHH---TSSGGGEEEEESSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHcCC
Confidence 568999999999 9999999999999999999999997
|
... |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=80.25 E-value=1.1 Score=45.71 Aligned_cols=28 Identities=29% Similarity=0.534 Sum_probs=19.9
Q ss_pred CCHHHHHHHHHhhcCCCCeEEEECCCChh
Q 002984 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRS 640 (861)
Q Consensus 612 ~s~~~~~~L~~L~~~~g~~v~I~TGR~~~ 640 (861)
|-+.+.++|++| .+.|..++++|+|+..
T Consensus 74 p~~gA~e~l~~L-~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 74 PIPGAVEALKKL-RDKGHEIVIITARPPE 101 (191)
T ss_dssp B-TTHHHHHHHH-HTSTTEEEEEEE-SSS
T ss_pred ccHHHHHHHHHH-HHcCCcEEEEEecCcc
Confidence 446778889998 5778778888887654
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 861 | ||||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 1e-52 | ||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 1e-52 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 2e-51 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 3e-15 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 4e-15 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 1e-13 | ||
| 1u02_A | 239 | Crystal Structure Of Trehalose-6-Phosphate Phosphat | 6e-06 |
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
| >pdb|1U02|A Chain A, Crystal Structure Of Trehalose-6-Phosphate Phosphatase Related Protein Length = 239 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 861 | |||
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 0.0 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 0.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 1e-72 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 1e-10 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 1e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-04 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 8e-09 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 5e-08 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 4e-07 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 8e-07 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 3e-06 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 6e-06 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 6e-06 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 4e-05 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 1e-04 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 1e-04 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 7e-04 |
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 630 bits (1626), Expect = 0.0
Identities = 130/527 (24%), Positives = 234/527 (44%), Gaps = 47/527 (8%)
Query: 60 RKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQ 119
R ++V+N + + G + G ++ G + +E
Sbjct: 3 RLVVVSNRIAPPDEHAASAGGLAVGIL----------GALKAAGGLWFGW--SGETGNED 50
Query: 120 EEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQA 179
+ + + + L ++Y F LWP FHY L + +F R W
Sbjct: 51 QPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAWDG 105
Query: 180 YVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY 239
Y+ N + ADK++ ++ DD +W+HDYHL+ LRKR ++GFFLH PFP+ EI+
Sbjct: 106 YLRVNALLADKLLPLLQDDD-IIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIF 164
Query: 240 RTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 299
LP D +L L + DL+GF T + FL C S + + S + H +G+
Sbjct: 165 NALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFRT 221
Query: 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQL 359
++ P+G+ + P K+ +++ + + I ++ +D KG+ + LA E L
Sbjct: 222 EVYPIGIEPKEIAKQAAGPLPP-KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEAL 280
Query: 360 LQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419
L+++P GK+ QI +RG + Q+ + + A RIN YG + P+ +++
Sbjct: 281 LEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHF 340
Query: 420 PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS 479
R + ++ +V +RDGMNLV +Y+ + + +LV+S
Sbjct: 341 DRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPA--------------NPGVLVLS 386
Query: 480 EFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539
+F G + L+ A+ VNP+D D VA A+ A+ M +E+ RH + + +D+ +W
Sbjct: 387 QFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQEC 446
Query: 540 FAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAY 586
F DL++ + +F +L+++H +
Sbjct: 447 FISDLKQIVPRSAES-----------QQRDKVATFPKLALEHHHHHH 482
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 576 bits (1486), Expect = 0.0
Identities = 92/510 (18%), Positives = 177/510 (34%), Gaps = 40/510 (7%)
Query: 57 SRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADID- 115
+ + + + D TG L + + + ++ S ++ D
Sbjct: 1 TGSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVV-AEQAGVLNISWIASADSEDDR 59
Query: 116 --ASEQEEVAQKLLDDFNCVPTFL---PHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGD 170
++ + L + L + + +W +Y
Sbjct: 60 RASALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSF 119
Query: 171 -RFDRVLWQAYVSANKIFADKVMEVINP-DDDCVWVHDYHLMVLPTFLRKRFNRIKLGFF 228
R W + + FAD +++ D VHDY L+ +P LR++ + F
Sbjct: 120 GSDAREGWADFGRFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLF 179
Query: 229 LHSPFPSSEIYRTLP--VRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRG 286
+H P+PS++ +R LP +R IL G+L IGF + R+FL + +L D R
Sbjct: 180 VHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLP-DARIDRE 238
Query: 287 HIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIF 346
+ +++ G ++ +P+G L+ + IE+ DG +L++ D
Sbjct: 239 AMTVEWRGHRTRLRTMPLGYSPLTLDG-----RNPQLPEGIEEWADGHRLVVHSGRTDPI 293
Query: 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGS 406
K + A +L G K ++ +NP R + N GS
Sbjct: 294 KNAERAVRAF--VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGS 351
Query: 407 PNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGR 466
V ID A + A+ I N+ DG NL ++ + +
Sbjct: 352 ----DTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNER---------- 397
Query: 467 ERDSPHTSMLVVSEFIGCSPSLSGAIR-VNPWDIDAVADAMTLAINMRDSEKQLRHEKHY 525
+ +++SE G + L R VNP+D+ A+A++ A+ ++ +
Sbjct: 398 ------DADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRR 451
Query: 526 RYVSTHDVAYWARSFAQDLERACRDHYSKR 555
+ W ++ L +
Sbjct: 452 DAARPWTLEAWVQAQLDGLAADHAARTATA 481
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 237 bits (607), Expect = 1e-72
Identities = 55/258 (21%), Positives = 94/258 (36%), Gaps = 31/258 (12%)
Query: 593 AIFLDYDGTVVP--ETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE 650
IFLDYDGT+VP ++S++ L +IV+GR +S +L
Sbjct: 3 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDL--KERFDTYIVTGRSPEEISRFLPLD- 59
Query: 651 MLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVW 710
+ + HG + N + L + RS+ G I K A+++
Sbjct: 60 -INMICYHGACSKINGQIVYNNGS-DRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLY 117
Query: 711 HHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMF 770
H D +L +E + G+ I+E++ GV+KG V
Sbjct: 118 HLGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGE-- 171
Query: 771 NGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDAT 830
+ GDD +DE FE + VG + AK+++ D
Sbjct: 172 ------RPAIIAGDDATDEAAFE------------ANDDALTIKVGEGETHAKFHVADYI 213
Query: 831 DVLKLLQGLATASSSKPR 848
++ K+L+ + K +
Sbjct: 214 EMRKILKFIEMLGVQKKQ 231
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* Length = 262 | Back alignment and structure |
|---|
Score = 61.9 bits (149), Expect = 1e-10
Identities = 40/248 (16%), Positives = 84/248 (33%), Gaps = 41/248 (16%)
Query: 585 AYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSE 644
A R+ ER D DGT+ P I PEV + L+ L S + +V G ++E
Sbjct: 7 AARRKERVLCLFDVDGTLTPARQKID---PEVAAFLQKLRS--RVQIGVVGGSDYCKIAE 61
Query: 645 WLAPCEMLGIAAEHGYF----IRWNKTSEWETNHLGADL---EWKKIVEPVMR----SYT 693
L + + ++ + +++ + L + ++ +
Sbjct: 62 QLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRL 121
Query: 694 EATDGSNIEIKESALVWHH-----------QDADPDFGSCQAKELLDHLESVLAN-EPAV 741
G+ IE + L + ++ D ++ ++ L++ A
Sbjct: 122 PKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRF 181
Query: 742 VKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRS----DEDMFESILS 797
+ G +V P+G K + + D + G++ S D ++F +
Sbjct: 182 SRGGMISFDVFPEGWDKRYCLDSLD------QDSFDTIHFFGNETSPGGNDFEIFADPRT 235
Query: 798 ---TVSGP 802
+V P
Sbjct: 236 VGHSVVSP 243
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 1e-10
Identities = 38/206 (18%), Positives = 69/206 (33%), Gaps = 29/206 (14%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
R +D DG + +I + I +++ TV ++SG +
Sbjct: 6 RLAAIDVDGNLTDRDRLI---STKAIESIRSA-EKKGLTVSLLSGNVIPVVYALK---IF 58
Query: 652 LG----IAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESA 707
LG + E+G + N S ++ K +E M T S I +
Sbjct: 59 LGINGPVFGENGGIMFDNDGSI---KKFFSNEGTNKFLE-EMSKRT-----SMRSILTNR 109
Query: 708 LVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLV 767
D D E +D++ + V+ + + +G K A L
Sbjct: 110 WREASTGFDID------PEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKA-FAVNKLK 162
Query: 768 RMFNGGRPPDFVMCVGDDRSDEDMFE 793
M+ D ++ +GD +D MF+
Sbjct: 163 EMY--SLEYDEILVIGDSNNDMPMFQ 186
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.9 bits (144), Expect = 3e-09
Identities = 100/653 (15%), Positives = 192/653 (29%), Gaps = 203/653 (31%)
Query: 113 DIDASEQEEVAQKLL--------DDFNC--VPTFLPHDLQKKFYLGFCKQHLWPLFHYML 162
D + E + + +L D+F+C V L K+ H+
Sbjct: 8 DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI-----DHII------- 55
Query: 163 PMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFN- 221
M D R+ W ++ V EV+ + + P+ + + +
Sbjct: 56 -MSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE 114
Query: 222 -RIKLGFFLHSPFPSSEIYRTLPVRD--EILRGLLNCDLIGFHTFDYARHFLSCCSRMLG 278
R +L + + F + R P + L L + +LG
Sbjct: 115 QRDRL-YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG-------------VLG 160
Query: 279 LDYESKRGHIGLDYFGRTV----------YIKILPVGVH---MGRLESVLNLPATATKIK 325
G+T + + + S +
Sbjct: 161 --------------SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV-------- 198
Query: 326 EIEKQFDGKKLILGIDDM-----DIFKGISLKLLAMEQ----LLQQHPGMRGKVVLVQIV 376
+E +KL+ ID D I L++ +++ LL+ P +VL
Sbjct: 199 -LEML---QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL---- 250
Query: 377 NPARGSGKDVQEAK---------KETYLTA--KRINEVYGSPNYEPVVLIDRPVPRFEKS 425
+VQ AK K LT K++ + + + L +
Sbjct: 251 -------LNVQNAKAWNAFNLSCK-ILLTTRFKQVTDFLSAATTTHISLDHHSMT-LTPD 301
Query: 426 AYYAV-------------AECCIVN---------AVRDGMNLV-PYKYIVCRQGTPIMD- 461
++ E N ++RDG+ +K++ C + T I++
Sbjct: 302 EVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIES 361
Query: 462 --EALGRERDSPHTSMLVVSEF-----IGCSPS--LSGAIRVNPWDIDAVADAMTLAINM 512
L L V F I P+ LS + W +D M + +
Sbjct: 362 SLNVLEPAEYRKMFDRLSV--FPPSAHI---PTILLS---LI--WFDVIKSDVMVVVNKL 411
Query: 513 RDSEKQLRHEKHYRYVSTHDVAYWARSFAQD---LERACRDHYSKRCWGIGLGLGFRVLS 569
+ K S + + ++ L R+ DHY+ F
Sbjct: 412 HKYSLVEKQPKESTI-SIPSIYLELKVKLENEYALHRSIVDHYNIPK-------TFDSDD 463
Query: 570 LSPSFRRLSID-----HIVSAY-----RKTER----RAIFLDY---DGTVVPETSIIKSP 612
L P +D HI + ER R +FLD+ + + +++ +
Sbjct: 464 LIP----PYLDQYFYSHI--GHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNAS 517
Query: 613 GP--EVISVLKT----LC-SDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEH 658
G + LK +C +DP + +++ ++L E I +++
Sbjct: 518 GSILNTLQQLKFYKPYICDNDPKYERLV------NAILDFLPKIEENLICSKY 564
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.3 bits (140), Expect = 9e-09
Identities = 60/366 (16%), Positives = 115/366 (31%), Gaps = 102/366 (27%)
Query: 88 DLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYL 147
+ L H + D E + + K L +C P LP ++
Sbjct: 288 HISLDHHSMTLTPD----------------EVKSLLLKYL---DCRPQDLPREV------ 322
Query: 148 GFCKQHLWPLFHYMLP-MCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHD 206
+ P ++ D +D W+ + DK+ +I + + V +
Sbjct: 323 --LTTN--PRRLSIIAESIRDGLATWDN--WK------HVNCDKLTTII---ESSLNVLE 367
Query: 207 YHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYA 266
P RK F+R+ + FP S + +L L+ D+I
Sbjct: 368 ------PAEYRKMFDRLSV-------FPPS-----AHIPTILL-SLIWFDVIKSDVMVVV 408
Query: 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKE 326
L ++ + K I + +++ + N A I +
Sbjct: 409 NK---LHKYSL-VEKQPKESTISIP-------------SIYLELKVKLENEYALHRSIVD 451
Query: 327 ---IEKQFDGKKLILGIDDMDIFKGIS--LKLLAMEQLLQQHPG-------MRGKVVLVQ 374
I K FD LI D + I LK + + + + K+
Sbjct: 452 HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDS 511
Query: 375 IVNPARGSGKD-VQEAKK-ETYLTAKRINEVYGSPNYEPVV--LIDRPVPRFEKSAYYAV 430
A GS + +Q+ K + Y+ P YE +V ++D +P+ E++ +
Sbjct: 512 TAWNASGSILNTLQQLKFYKPYICDN-------DPKYERLVNAILDF-LPKIEENLICS- 562
Query: 431 AECCIV 436
++
Sbjct: 563 KYTDLL 568
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 7e-04
Identities = 33/208 (15%), Positives = 57/208 (27%), Gaps = 72/208 (34%)
Query: 81 WCFSLDED------------LLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLD 128
W + D L+ K+ S I L+ + + + + ++D
Sbjct: 396 WFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS----IPSIYLELKVKLENEYALHRSIVD 451
Query: 129 DFNCVPTFLPHDLQKK-------FYLGFCKQHL--------WPLFH--YMLPMCPDHGDR 171
+N TF DL ++G HL LF ++ D R
Sbjct: 452 HYNIPKTFDSDDLIPPYLDQYFYSHIGH---HLKNIEHPERMTLFRMVFL-----D--FR 501
Query: 172 F-------DRVLWQAYVSANKIFAD--KVMEVINPDDDCVWVHDYHLMV--LPTFLRK-- 218
F D W A S I +D Y +V + FL K
Sbjct: 502 FLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDP-----KYERLVNAILDFLPKIE 556
Query: 219 ------RFNRI-KLGFFLHSPFPSSEIY 239
++ + ++ I+
Sbjct: 557 ENLICSKYTDLLRIALM----AEDEAIF 580
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 8e-09
Identities = 39/206 (18%), Positives = 75/206 (36%), Gaps = 27/206 (13%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
+AI +D DGT+ +I + + ++ + +V+G +
Sbjct: 4 KAISIDIDGTITYPNRMI---HEKALEAIRRA-ESLGIPIMLVTGNTVQFAEAAS---IL 56
Query: 652 LG----IAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESA 707
+G + AE G I + K + + D EW E + + + A + + +
Sbjct: 57 IGTSGPVVAEDGGAISYKKKRIFLASM---DEEWILWNE-IRKRFPNARTSYTMPDRRAG 112
Query: 708 LVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLV 767
LV + + + +E+++ L L V + VK ++KG +
Sbjct: 113 LVIMRETINVE----TVREIINELNLNL-----VAVDSGFAIHVKKPWINKG-SGIEKAS 162
Query: 768 RMFNGGRPPDFVMCVGDDRSDEDMFE 793
G P V VGD +D D F+
Sbjct: 163 EFL--GIKPKEVAHVGDGENDLDAFK 186
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} Length = 289 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 5e-08
Identities = 31/232 (13%), Positives = 66/232 (28%), Gaps = 32/232 (13%)
Query: 588 KTERRAIFLDYDGTVVP--ETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEW 645
+ + +F D+D T P + E+ L+ D + V+G S+ +
Sbjct: 19 EHPQYIVFCDFDETYFPHTIDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDK 78
Query: 646 LAPCEMLGIAAEHGYFIRWNKTSEWETNHLGA---DLEW---------KKIVEPVMRSYT 693
+ + T + D +W K+ VE +++
Sbjct: 79 M---GRGKFRYFPHFIASDLGTEITYFSEHNFGQQDNKWNSRINEGFSKEKVEKLVKQLH 135
Query: 694 EA--------TDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLE----SVLANEPAV 741
E T K + + + +++ + N A
Sbjct: 136 ENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAG 195
Query: 742 VKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFE 793
+ V+ P G K + +L + + + GD +D M +
Sbjct: 196 DPEDSYDVDFIPIGTGKNEIVTFMLEKY---NLNTERAIAFGDSGNDVRMLQ 244
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 Length = 275 | Back alignment and structure |
|---|
Score = 51.2 bits (122), Expect = 4e-07
Identities = 32/218 (14%), Positives = 65/218 (29%), Gaps = 22/218 (10%)
Query: 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLG 653
+F D DGT++ S P ++ L+ + N V + S + + + + G
Sbjct: 12 VFSDLDGTLLDSHSYDWQPAAPWLTRLR----EANVPVILCSSKTSAEMLYLQKTLGLQG 67
Query: 654 --IAAEHGYFIR----WNKTSEWETNHLGADLEWKKIVEPVMRSYTEA--TDGSNIEIKE 705
+ AE+G I+ W + + G +V +R T +++
Sbjct: 68 LPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDAT 127
Query: 706 SALVWHHQDADPDFGS----------CQAKELLDHLESVLANEPAVVKRGQHIVEVKPQG 755
A + + E + + L +G V
Sbjct: 128 IAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDAS 187
Query: 756 VSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFE 793
K A ++ + +GD +D + E
Sbjct: 188 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLE 225
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* Length = 244 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 8e-07
Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 30/213 (14%)
Query: 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE 650
+ + D D T V + + E + N + +GR S E +
Sbjct: 3 QLLLISDLDNTWVGDQQAL-----EHLQEYLGD-RRGNFYLAYATGRSYHSARELQ---K 53
Query: 651 MLGIAAEHGY------FIRWNKTSEWE-TNHLGADLEWKKIVEPVMRSYTEATDGSNIEI 703
+G+ + I + + ++L + + I++ + + S +E
Sbjct: 54 QVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQ-RDILQAIADGFEALKPQSPLEQ 112
Query: 704 KESALVWHHQDADPDFGSCQAKELLDHLESVLANEPA---VVKRGQHIVEVKPQGVSKGL 760
+ +H DP ++D L +L V+ V++ PQ +KG
Sbjct: 113 NPWKISYHL---DPQ----ACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKG- 164
Query: 761 VAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFE 793
A + L + P + GD +D +FE
Sbjct: 165 NATQYLQQHL--AMEPSQTLVCGDSGNDIGLFE 195
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A Length = 246 | Back alignment and structure |
|---|
Score = 48.4 bits (114), Expect = 3e-06
Identities = 37/241 (15%), Positives = 59/241 (24%), Gaps = 41/241 (17%)
Query: 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP-- 648
D DGT+ I E+ L+ L + +V G + E L
Sbjct: 6 PALCLFDVDGTLTAPRQKIT---KEMDDFLQKLRQ--KIKIGVVGGSDFEKVQEQLGNDV 60
Query: 649 --------CEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSN 700
E +A + G + L DL + + + G+
Sbjct: 61 VEKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDL-INYCLSYIAKIKLPKKRGTF 119
Query: 701 IEIKESALVWHHQDADPDFGSCQAKELLDH------------LESVLANEPAVVKRGQHI 748
IE + L LD + GQ
Sbjct: 120 IEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQIS 179
Query: 749 VEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRS----DEDMFESILS---TVSG 801
+V P G K V + GD D ++F + +V+
Sbjct: 180 FDVFPDGWDKRYCLRHVE------NDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 233
Query: 802 P 802
P
Sbjct: 234 P 234
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} PDB: 2i54_A* 2i55_A* Length = 246 | Back alignment and structure |
|---|
Score = 47.6 bits (112), Expect = 6e-06
Identities = 41/242 (16%), Positives = 73/242 (30%), Gaps = 41/242 (16%)
Query: 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649
+R + D DGT+ P E+ +++K V V G + E L
Sbjct: 3 KRVLLLFDVDGTLTPPRLCQT---DEMRALIKRA-RGAGFCVGTVGGSDFAKQVEQLGRD 58
Query: 650 EM---LGIAAEHGYFIRWNKTSEWETN---HLGADLEWKKIVEPVMR----SYTEATDGS 699
+ + AE+G N + LG D K V+ +R G+
Sbjct: 59 VLTQFDYVFAENGLLAYRNGLEIHRQSLLNALGND-RIVKFVKKTLRLIADLDIPVQRGT 117
Query: 700 NIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVK------------RGQH 747
+E + + + E+ D+ V A+ A ++ GQ
Sbjct: 118 FVEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIAELENSFPDFGLKYSIGGQI 177
Query: 748 IVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRS----DEDMFESILS---TVS 800
+V P G K + V + GD D +++ + V+
Sbjct: 178 SFDVFPVGWDKTYCLQFVEDDFEE-------IHFFGDKTQEGGNDYEIYTDKRTIGHKVT 230
Query: 801 GP 802
Sbjct: 231 SY 232
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} Length = 274 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 6e-06
Identities = 36/234 (15%), Positives = 80/234 (34%), Gaps = 40/234 (17%)
Query: 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML 652
+ LD DGT+ E I ++ + +V I +GR ++ + + +
Sbjct: 7 LLILDIDGTLRDEVYGI---PESAKHAIRLC-QKNHCSVVICTGRSMGTIQDDVLSLGVD 62
Query: 653 GIAAEHGYFIRWN---------------KTSEW-----------ETNHLGADLEWKKIVE 686
G A G +I+++ + + + + K+I E
Sbjct: 63 GYIAGGGNYIQYHGELLYNQSFNQRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFE 122
Query: 687 PVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQA-----KELLDHLESVLANEP-- 739
+ + + + I+E ++ + + +++ D ++ +L ++
Sbjct: 123 TMNQLKGTNSCINKQHIQEKITYENNIEEYKSQDIHKICLWSNEKVFDEVKDILQDKMEL 182
Query: 740 AVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFE 793
A E+ + KG A K L G +C GD ++D MF+
Sbjct: 183 AQRDISSQYYEIIQKDFHKG-KAIKRLQERL--GVTQKETICFGDGQNDIVMFQ 233
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* Length = 259 | Back alignment and structure |
|---|
Score = 45.4 bits (107), Expect = 4e-05
Identities = 31/220 (14%), Positives = 59/220 (26%), Gaps = 31/220 (14%)
Query: 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLG 653
+F D DGT++ E + L+ L V V+ + R + +
Sbjct: 3 VFTDLDGTLLDERGEL----GPAREALERL-RALGVPVVPVTAKTRKEVEALGLEPPFI- 56
Query: 654 IAAEHGYFIRWNKTSEWETNH---------LGADLE-----WKKIVEPVMRSYTEATDGS 699
E+G + + L ++ R D +
Sbjct: 57 --VENGGGLYLPRDWPVRAGRPKGGYRVVSLAWPYRKVRARLREAEALAGRPILGYGDLT 114
Query: 700 NIEIKESALVWHHQDADPDFGSCQAKELLDH------LESVLANEPAVVKRGQHIVEVKP 753
+ + +L LE++ A G+
Sbjct: 115 AEAVARLTGLSREAARRAKAREYDETLVLCPEEVEAVLEALEAVGLEWTHGGR--FYHAA 172
Query: 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFE 793
+G KG A L ++ F + +GD +D +F
Sbjct: 173 KGADKG-RAVARLRALWPDPEEARFAVGLGDSLNDLPLFR 211
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} Length = 279 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 1e-04
Identities = 45/236 (19%), Positives = 85/236 (36%), Gaps = 45/236 (19%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
+ I +D DGT++ E + + I ++ V + +GR + + +L +
Sbjct: 6 KLIAIDIDGTLLNEKNEL---AQATIDAVQAA-KAQGIKVVLCTGRPLTGVQPYL---DA 58
Query: 652 LGIAAEHGYFIRWN----KTSEWET---NHLGADLEWKKIVE-------PVM-----RSY 692
+ I + Y I +N +T + + L + ++ + Y
Sbjct: 59 MDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYE-DYIDLEAWARKVRAHFQIETPDYIY 117
Query: 693 TEATDGSNIEIKESALVWHH------QDADPDFGSCQA---------KELLDHLESVLAN 737
T D S I ES LV + D +A +++ ++ +
Sbjct: 118 TANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKD 177
Query: 738 EPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFE 793
+VV+ + +EV + SKG LV G D VM +GD +D M +
Sbjct: 178 RFSVVQSAPYFIEVMNRRASKG-GTLSELVDQL--GLTADDVMTLGDQGNDLTMIK 230
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A Length = 249 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 1e-04
Identities = 47/266 (17%), Positives = 75/266 (28%), Gaps = 41/266 (15%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
R IFLD D T++P +++ L D + S + R+ + E+
Sbjct: 3 RLIFLDIDKTLIPGYEPD-----PAKPIIEEL-KDMGFEIIFNSSKTRAEQEYYRKELEV 56
Query: 652 -LGIAAEHGYFIRWNKT-----------SEWETNHLGADLEWKKIVEPVMRSYTEATDGS 699
+E+G I K + LG +E + + +
Sbjct: 57 ETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYG 116
Query: 700 NIEIKESALVWHHQDADPDFGSCQA------KELLDHLESVLANEPAVVKRGQHIVEVKP 753
N +E + + D E VL V G V
Sbjct: 117 NSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTV-H 175
Query: 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFAC 813
KG A+ +L VGD +D MFE V
Sbjct: 176 GNSDKGKAAKILLDFY--KRLGQIESYAVGDSYNDFPMFE-----VVD---------KVF 219
Query: 814 TVGRKPSKAKYYLDDATDVLKLLQGL 839
VG K + DVL++++
Sbjct: 220 IVGSLKHKKAQNVSSIIDVLEVIKHH 245
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 Length = 282 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 7e-04
Identities = 39/236 (16%), Positives = 77/236 (32%), Gaps = 44/236 (18%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
+ I +D DGT++ I P V + + V + +GR + + +L +
Sbjct: 6 KLIAIDMDGTLLLPDHTI---SPAVKNAIAAA-RARGVNVVLTTGRPYAGVHNYL---KE 58
Query: 652 LGIAAEHGY-------FIRWNKTSEW------------ETNHLGADLEWKKIVEPVMRSY 692
L + Y ++ L ++ Y
Sbjct: 59 LHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLY 118
Query: 693 TEATDGSNIEIKESALVWHH------QDADPDFGSCQA---------KELLDHLESVLAN 737
T D S + ES + + DP+ + + + + +
Sbjct: 119 TANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKE 178
Query: 738 EPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFE 793
+ V+K + +E+ + V+KG K L + G P+ +M +GD +D M E
Sbjct: 179 KYTVLKSAPYFLEILDKRVNKG-TGVKSLADVL--GIKPEEIMAIGDQENDIAMIE 231
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 861 | |||
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.95 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.94 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.93 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.93 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.92 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.92 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.92 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.92 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.91 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.91 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.91 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.91 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.91 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.91 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.9 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 99.9 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 99.89 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.89 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 99.89 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.89 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.88 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.88 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.88 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.88 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.88 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.88 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.87 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.87 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.87 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.87 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.87 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.86 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.86 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.86 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.86 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.85 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.84 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.83 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.79 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.78 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.77 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.76 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.72 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.66 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.66 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.65 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.63 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.59 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.52 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.5 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.46 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.44 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.43 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.41 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.39 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.38 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.35 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.35 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.34 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.32 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.24 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.22 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.22 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.22 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.2 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.19 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.19 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.17 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.16 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.15 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.15 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.14 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.14 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.12 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.12 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.12 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.11 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.08 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.05 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.03 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.01 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.01 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 98.99 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.99 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.99 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.98 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.97 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.97 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.96 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.96 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.94 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.93 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.89 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.89 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 98.89 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.88 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.88 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.88 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.88 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.88 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.84 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.84 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.83 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.83 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 98.8 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.8 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.8 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.8 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.78 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 98.78 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.78 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.77 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.77 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.77 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.75 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.74 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 98.74 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.74 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.74 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 98.74 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.73 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.69 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 98.69 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 98.65 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.64 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.64 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.64 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.63 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.61 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.58 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.56 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.56 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.55 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 98.54 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.49 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.47 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 98.45 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 98.45 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 98.4 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.4 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 98.39 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.38 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.35 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 98.34 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.31 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.27 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.22 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.21 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 98.19 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.18 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 98.14 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.07 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 98.05 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.04 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 98.03 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 98.0 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 97.96 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.95 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.9 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 97.82 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 97.75 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 97.75 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.71 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 97.7 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 97.59 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 97.54 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 97.43 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 97.31 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.22 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 96.25 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.13 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 97.12 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 97.1 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 96.97 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 96.84 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 96.69 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 96.66 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.66 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 96.63 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 96.23 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 96.22 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 95.84 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 95.45 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 95.25 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 95.03 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 95.01 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 94.99 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 94.82 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 94.8 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 94.6 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 93.38 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 91.56 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 91.54 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 91.22 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 90.64 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 90.48 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 89.93 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 89.26 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 89.26 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 88.95 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 87.78 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 87.46 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 87.3 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 87.08 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 85.92 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 85.64 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 84.35 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 83.34 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 82.7 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 82.48 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 81.59 |
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-108 Score=936.80 Aligned_cols=457 Identities=19% Similarity=0.269 Sum_probs=406.3
Q ss_pred CCcEEEEEcCCccceeecCCCCcE---EEEecCChhhHhhhccccCCCCeEEEecCCCCCChhHHHHHHH---------h
Q 002984 58 RERKIIVANMLPLHAKRDTETGRW---CFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQ---------K 125 (861)
Q Consensus 58 ~~~~iivsnrlP~~~~~~~~~~~~---~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~---------~ 125 (861)
+.++||||||||+.+++++++|+| .++.++|||+++|.+.+ +++||||.+.+.+. +.+.+ .
T Consensus 2 ~~~livvsnR~P~~~~~~~~~g~~~~~~~~~s~GGLv~al~~~~----~~~Wvgw~~~~~~~---~~~~~~~~~~~~~~~ 74 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVL----NISWIASADSEDDR---RASALNPDGVTMELH 74 (496)
T ss_dssp --CEEEEESCCCEEEEECTTTCSEEEEECSSHHHHHHHHHHHHH----TCCEEEECCSHHHH---HHHHHCTTCEEEECT
T ss_pred CCCEEEEECCCCeeEEEecCCCceeeeeeccCCCchHHHHhhhc----CCEEEecCCCccch---hhhhccccccccccc
Confidence 468999999999999987445676 67778899999997644 79999998864322 22211 1
Q ss_pred hcCCceEEEEeCChHHHHHHHhhccccccccccccCCC--CCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCC-CCCEE
Q 002984 126 LLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLP--MCPDHGDRFDRVLWQAYVSANKIFADKVMEVINP-DDDCV 202 (861)
Q Consensus 126 ~~~~~~~~pv~l~~~~~~~~y~gf~~~~lwpl~H~~~~--~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p-~~D~V 202 (861)
..++|+|+||+|+++++++||+||||++|||+|||+.+ ..|+. .+|+++.|++|++||++||++|++.+++ ++|+|
T Consensus 75 ~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~p~~-~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~V 153 (496)
T 3t5t_A 75 SGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSF-GSDAREGWADFGRFTRDFADAILKSSAQSADPVY 153 (496)
T ss_dssp TSCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSCCCB-CHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEE
T ss_pred cCCCeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCCCCcc-chhhHHHHHHHHHHHHHHHHHHHHHhccCCCCEE
Confidence 25789999999999999999999999999999999853 33433 3567789999999999999999999952 46999
Q ss_pred EEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCC--chHHHHHHhhcCCEEeecChHhHHHHHHHHHHHh-CC
Q 002984 203 WVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLP--VRDEILRGLLNCDLIGFHTFDYARHFLSCCSRML-GL 279 (861)
Q Consensus 203 wvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp--~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~l-g~ 279 (861)
||||||||+||+|||+++|+++||||||||||++|+|++|| ||++||+|||+||+|||||++|++||++||+|+| |+
T Consensus 154 wVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~ 233 (496)
T 3t5t_A 154 LVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDA 233 (496)
T ss_dssp EEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTC
T ss_pred EEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999 7999999999999999999999999999999999 98
Q ss_pred ccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHH
Q 002984 280 DYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQL 359 (861)
Q Consensus 280 ~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~l 359 (861)
++....+ .+.++|+.++|.++|+|||++.|.+... +. .++++++++++++||+|||+|+.|||..+|+|| +|
T Consensus 234 ~~~~~~~--~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~l 305 (496)
T 3t5t_A 234 RIDREAM--TVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VL 305 (496)
T ss_dssp EEETTTT--EEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HH
T ss_pred cccccCC--eEEECCEEEEEEEeccEeCHHHhchhhH--HH---HHHHHHHhCCceEEEEcccCccccCHHHHHHHH-HH
Confidence 8765554 5899999999999999999999986543 11 256788888999999999999999999999999 99
Q ss_pred HHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceeccc
Q 002984 360 LQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAV 439 (861)
Q Consensus 360 l~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~ 439 (861)
|+++|+++ +++|||||.|+|+++++|+++++++++++++||.+||.. ||+++ +.++.+|+.++|++|||||+||+
T Consensus 306 l~~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~-g~v~~~el~aly~~ADv~vv~Sl 380 (496)
T 3t5t_A 306 AARGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRID-NDNDVNHTIACFRRADLLIFNST 380 (496)
T ss_dssp HHHTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEE-ECCCHHHHHHHHHHCSEEEECCS
T ss_pred HHhCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEEe-CCCCHHHHHHHHHhccEEEECcc
Confidence 99999999 999999999999999999999999999999999999976 77765 57899999999999999999999
Q ss_pred ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHH
Q 002984 440 RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQ 518 (861)
Q Consensus 440 ~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~ 518 (861)
+||||||++|||||+. ++||+|+|+|+|++++| .+|++|||||++++|+||.++|+|+++||+
T Consensus 381 rEGfgLv~~EamA~~~----------------~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~ 444 (496)
T 3t5t_A 381 VDGQNLSTFEAPLVNE----------------RDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRA 444 (496)
T ss_dssp SBSCCSHHHHHHHHCS----------------SCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHH
T ss_pred cccCChhHHHHHHhCC----------------CCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHH
Confidence 9999999999999953 36999999999999999 579999999999999999999999999999
Q ss_pred HHHHHhhhhhccCCHhHHHHHHHHHHHHHHHhh
Q 002984 519 LRHEKHYRYVSTHDVAYWARSFAQDLERACRDH 551 (861)
Q Consensus 519 ~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~ 551 (861)
.|+++++++|.+||+.+|+++|+++|..+...+
T Consensus 445 ~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~~~ 477 (496)
T 3t5t_A 445 EAAARRRDAARPWTLEAWVQAQLDGLAADHAAR 477 (496)
T ss_dssp HHHHHHHHHHTTCBHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHhhcccch
Confidence 999999999999999999999999999876543
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-92 Score=818.70 Aligned_cols=453 Identities=27% Similarity=0.519 Sum_probs=413.1
Q ss_pred CcEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCChhHHHHHHHhhcCCceEEEEeCC
Q 002984 59 ERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLP 138 (861)
Q Consensus 59 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~ 138 (861)
+|+||||||||+... | +.+.|||+.+|.+.+. +.+++||||+|.. ++ +++.+.+.+.++|+|+||||+
T Consensus 2 ~~livvsnr~p~~~~-------~--~~~~ggl~~~l~~~~~-~~~~~wvgw~g~~-~~-~~~~~~~~~~~~~~~~~v~l~ 69 (482)
T 1uqt_A 2 SRLVVVSNRIAPPDE-------H--AASAGGLAVGILGALK-AAGGLWFGWSGET-GN-EDQPLKKVKKGNITWASFNLS 69 (482)
T ss_dssp CCEEEEEEECCCCC-------------CCCHHHHHHHHHHH-HHCEEEEEEEEEE-SC-CSSCCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCCCCC-------C--CcCCCcHHHHHHHHHh-hCCCEEEeCCCCC-Cc-ccchhhhhccCCceEEEEECC
Confidence 589999999999721 1 3567999999987664 5799999999865 22 222233344578999999999
Q ss_pred hHHHHHHHhhccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHh
Q 002984 139 HDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRK 218 (861)
Q Consensus 139 ~~~~~~~y~gf~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~ 218 (861)
++++++||+||||++|||+|||+++. ..|+++.|++|++||+.||+++.+.+++ +|+|||||||++++|.++|+
T Consensus 70 ~~~~~~~y~gf~~~~lWp~~H~~~~~-----~~~~~~~w~~y~~vN~~fa~~l~~~~~~-~DiV~vHdyhl~~l~~~lr~ 143 (482)
T 1uqt_A 70 EQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRK 143 (482)
T ss_dssp HHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHHHhhhhhccccccCcCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEECchHHHHHHHHHH
Confidence 99999999999999999999999865 4899999999999999999999999987 49999999999999999999
Q ss_pred hcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEE
Q 002984 219 RFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVY 298 (861)
Q Consensus 219 ~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~ 298 (861)
+.++++|+||+|+|||++++|+++|++++|+++|+++|+||||+++|+++|+++|+++++.+.... + .+.++|+.++
T Consensus 144 ~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~-~--~~~~~g~~~~ 220 (482)
T 1uqt_A 144 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSA-K--SHTAWGKAFR 220 (482)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETT-T--EEEETTEEEE
T ss_pred hCCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccC-C--eEEECCeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876543 2 3678899999
Q ss_pred EEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 002984 299 IKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNP 378 (861)
Q Consensus 299 i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p 378 (861)
|.++|+|||++.|......++..+ ..++++++.++++|++|||+++.||+..+|+||++|++++|+++++++|||||.|
T Consensus 221 v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p 299 (482)
T 1uqt_A 221 TEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 299 (482)
T ss_dssp EEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCB
T ss_pred EEEEeccCCHHHHHHHhcCcchHH-HHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECC
Confidence 999999999999987655555555 6788999989999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCC
Q 002984 379 ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458 (861)
Q Consensus 379 ~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~ 458 (861)
+++++++|+++++++++++++||.+||..+|.||+++.+.++++++.++|++|||||+||++||||||++|||||+.+
T Consensus 300 ~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~-- 377 (482)
T 1uqt_A 300 SRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 377 (482)
T ss_dssp CSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT--
T ss_pred CccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred cccccccCCCCCCCCceEEeccCCCCcccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHH
Q 002984 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (861)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (861)
.++||+|+|+++|+++++.+|++|||+|++++|+||.++|+|++++|+.+++++++++.++|+.+|++
T Consensus 378 ------------~~~gpvV~S~~~G~~~~l~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~ 445 (482)
T 1uqt_A 378 ------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQE 445 (482)
T ss_dssp ------------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred ------------CCCCCEEEECCCCCHHHhCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 24689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 002984 539 SFAQDLERA 547 (861)
Q Consensus 539 ~fl~~l~~~ 547 (861)
+|++++.++
T Consensus 446 ~~l~~l~~~ 454 (482)
T 1uqt_A 446 CFISDLKQI 454 (482)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhc
Confidence 999999876
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-27 Score=249.40 Aligned_cols=225 Identities=23% Similarity=0.315 Sum_probs=165.2
Q ss_pred ceEEEecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcc
Q 002984 591 RRAIFLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTS 668 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~--~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~ 668 (861)
+|+|++||||||++... .++.++++++++|++| ++.| .|+|+|||++..+.+++..+ .++|++||+.+..++..
T Consensus 1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l-~~~g-~v~iaTGR~~~~~~~~~~~l--~~~I~~nGa~i~~~~~~ 76 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISDL-KERF-DTYIVTGRSPEEISRFLPLD--INMICYHGACSKINGQI 76 (239)
T ss_dssp -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHH-HHHS-EEEEECSSCHHHHHHHSCSS--CEEEEGGGTEEEETTEE
T ss_pred CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHH-hcCC-CEEEEeCCCHHHHHHHhccc--hheEEECCEEEeeCCee
Confidence 48999999999998421 2457999999999999 6788 99999999999999999776 68999999999885443
Q ss_pred eEEecCCccChHH-HHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCe
Q 002984 669 EWETNHLGADLEW-KKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQH 747 (861)
Q Consensus 669 ~~~~~~~~~~~~w-~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~ 747 (861)
.|.... .....+ .+.+..+++.. ...++.+++.++..+.++|+..++ +.....+++.+.+.+. . .+.+.++..
T Consensus 77 ~~~~~~-~~~~~l~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~-~--~~~~~~~~~ 150 (239)
T 1u02_A 77 VYNNGS-DRFLGVFDRIYEDTRSWV-SDFPGLRIYRKNLAVLYHLGLMGA-DMKPKLRSRIEEIARI-F--GVETYYGKM 150 (239)
T ss_dssp EECTTG-GGGHHHHHHHHHHHTTHH-HHSTTCEEEEETTEEEEECTTSCS-TTHHHHHHHHHHHHHH-H--TCEEEECSS
T ss_pred eecccc-cccchhhHHHHHHHHHHH-hhCCCcEEEecCCEEEEEcCCCCh-hHHHHHHHHHHHHhcc-C--CcEEEeCCc
Confidence 332000 001112 23344444433 334677787777777777775432 1111122333334332 2 234678889
Q ss_pred EEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHc--cccCCCCCCCCCCceEEEEeCCCCccccee
Q 002984 748 IVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESI--LSTVSGPSLPVPPEIFACTVGRKPSKAKYY 825 (861)
Q Consensus 748 ~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a--g~~~~~~~~~~~~~~~av~vG~~~s~Aky~ 825 (861)
++||.|+++|||.|+++|++++ | ++||||+.||++||+.+ |. +|+|||+++.|+|+
T Consensus 151 ~lei~~~~~~Kg~al~~l~~~~---g-----via~GD~~ND~~Ml~~a~~g~--------------~vam~Na~~~A~~v 208 (239)
T 1u02_A 151 IIELRVPGVNKGSAIRSVRGER---P-----AIIAGDDATDEAAFEANDDAL--------------TIKVGEGETHAKFH 208 (239)
T ss_dssp EEEEECTTCCHHHHHHHHHTTS---C-----EEEEESSHHHHHHHHTTTTSE--------------EEEESSSCCCCSEE
T ss_pred EEEEEcCCCCHHHHHHHHHhhC---C-----eEEEeCCCccHHHHHHhhCCc--------------EEEECCCCCcceEE
Confidence 9999999999999999999988 6 99999999999999999 74 89999999999999
Q ss_pred cCC---HhHHHHHHHHHHhhcCCCC
Q 002984 826 LDD---ATDVLKLLQGLATASSSKP 847 (861)
Q Consensus 826 l~d---~~eV~~~L~~L~~~~~~~~ 847 (861)
+.+ .++|.++|+++........
T Consensus 209 ~~~~~~~~gV~~~l~~~~~~~~~~~ 233 (239)
T 1u02_A 209 VADYIEMRKILKFIEMLGVQKKQEG 233 (239)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHC---
T ss_pred eCCCCCHHHHHHHHHHHHHhccccc
Confidence 988 8899999999876554433
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.2e-26 Score=245.95 Aligned_cols=229 Identities=22% Similarity=0.208 Sum_probs=163.4
Q ss_pred HHHHhccceEEEecCCccccCCCCCCC-CCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEE
Q 002984 584 SAYRKTERRAIFLDYDGTVVPETSIIK-SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYF 661 (861)
Q Consensus 584 ~~y~~s~~klI~~DlDGTLl~~~~~~~-~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~ 661 (861)
+.|...++|+|+||+||||++ +++ .++++++++|+++ +++|+.|+++|||+...+..++..+. ..++++.||+.
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~~i~~~~~~al~~l-~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~ 89 (283)
T 3dao_A 14 NLYFQGMIKLIATDIDGTLVK---DGSLLIDPEYMSVIDRL-IDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTV 89 (283)
T ss_dssp -----CCCCEEEECCBTTTBS---TTCSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTE
T ss_pred hhhhccCceEEEEeCcCCCCC---CCCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcE
Confidence 678999999999999999999 777 8999999999999 68999999999999999999987764 35799999999
Q ss_pred EEeCCcceEEecCCccChHHHHHHHHHHHHHhhc----------CCCceEeecccee--------Eeee------ccC--
Q 002984 662 IRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEA----------TDGSNIEIKESAL--------VWHH------QDA-- 715 (861)
Q Consensus 662 i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~----------~~gs~ie~k~~~l--------~~~~------~~~-- 715 (861)
+...+...+...++. +.+.++++.+.+. ..+.+........ ...+ ...
T Consensus 90 i~~~~~~i~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 163 (283)
T 3dao_A 90 VRTPKEILKTYPMDE------DIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDR 163 (283)
T ss_dssp EECSSCEEEECCCCH------HHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCC
T ss_pred EEECCEEEEEecCCH------HHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCc
Confidence 998766666554432 2233333333322 1112211110000 0000 000
Q ss_pred Cc--cch----hccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchH
Q 002984 716 DP--DFG----SCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDE 789 (861)
Q Consensus 716 d~--~~~----~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~ 789 (861)
.+ .+. .....++.+.+.+.+.+....+.++..++||+|+++|||.|++++++++ |++++++++|||+.||+
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~e~ia~GD~~NDi 240 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPAWNKKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRF---DLLPDEVCCFGDNLNDI 240 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHHHTTTEEEEEETTTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGGGH
T ss_pred cCceEEEEEcChHHHHHHHHHHHHHhcCCEEEEEecCceEEEeeCCCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHH
Confidence 00 000 1122344455555565545667888999999999999999999999999 99999999999999999
Q ss_pred HHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecCC--HhHHHHHHHHH
Q 002984 790 DMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLDD--ATDVLKLLQGL 839 (861)
Q Consensus 790 ~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~d--~~eV~~~L~~L 839 (861)
+||+.+|. +|+|||+ +..|+|++++ .++|.++|+++
T Consensus 241 ~ml~~ag~--------------~vam~na~~~~k~~A~~v~~s~~edGv~~~l~~~ 282 (283)
T 3dao_A 241 EMLQNAGI--------------SYAVSNARQEVIAAAKHTCAPYWENGVLSVLKSF 282 (283)
T ss_dssp HHHHHSSE--------------EEEETTSCHHHHHHSSEEECCGGGTHHHHHHHHT
T ss_pred HHHHhCCC--------------EEEcCCCCHHHHHhcCeECCCCCCChHHHHHHHh
Confidence 99999985 7999997 3788899865 56799999876
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-25 Score=241.41 Aligned_cols=229 Identities=15% Similarity=0.131 Sum_probs=156.3
Q ss_pred HHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEE
Q 002984 584 SAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFI 662 (861)
Q Consensus 584 ~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i 662 (861)
++|+.+++|+|+||+||||++ +.+.++++++++|+++ +++|+.|+++|||+...+..++..+. ...+++.||+.+
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i 89 (285)
T 3pgv_A 14 NLYFQGMYQVVASDLDGTLLS---PDHFLTPYAKETLKLL-TARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARV 89 (285)
T ss_dssp -------CCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-HTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEE
T ss_pred cccccCcceEEEEeCcCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEE
Confidence 689999999999999999999 8899999999999999 79999999999999999999887654 245799999999
Q ss_pred EeCC-cceEEecCCccChHHHHHHHHHHHHHhhcCCCceE--eecc-------c-eeE-------e--eeccC----Ccc
Q 002984 663 RWNK-TSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNI--EIKE-------S-ALV-------W--HHQDA----DPD 718 (861)
Q Consensus 663 ~~~~-~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~i--e~k~-------~-~l~-------~--~~~~~----d~~ 718 (861)
.... ...+...++ .+.+..+++.+... .+..+ .... . ... + ...+. ...
T Consensus 90 ~~~~~~~l~~~~l~------~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (285)
T 3pgv_A 90 HDSDGQQIFAHNLD------RDIAADLFEIVRND-PKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQG 162 (285)
T ss_dssp ECTTSCEEEECCCC------HHHHHHHTTTTTTC-TTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSS
T ss_pred ECCCCCEEEecCCC------HHHHHHHHHHHhhc-CCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCC
Confidence 8543 334443332 23344444422111 11111 0000 0 000 0 00000 000
Q ss_pred c--------hhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHH
Q 002984 719 F--------GSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDED 790 (861)
Q Consensus 719 ~--------~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~ 790 (861)
+ ......++.+.+.+.+......+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++
T Consensus 163 i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~l---gi~~~~~ia~GD~~NDi~ 239 (285)
T 3pgv_A 163 ISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKML---GYTLSDCIAFGDGMNDAE 239 (285)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHH
T ss_pred ceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCcHhhHH
Confidence 0 00122344555555554444556778899999999999999999999999 999999999999999999
Q ss_pred HHHHccccCCCCCCCCCCceEEEEeCCCC----cccce--ecC--CHhHHHHHHHHHH
Q 002984 791 MFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKY--YLD--DATDVLKLLQGLA 840 (861)
Q Consensus 791 Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky--~l~--d~~eV~~~L~~L~ 840 (861)
||+.+|. +|+|||++ ..|+| ++. +.++|.++|+++.
T Consensus 240 ml~~ag~--------------~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~~ 283 (285)
T 3pgv_A 240 MLSMAGK--------------GCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY 283 (285)
T ss_dssp HHHHSSE--------------EEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHHH
T ss_pred HHHhcCC--------------EEEccCCCHHHHHhCCCCEecccCCcchHHHHHHHHh
Confidence 9999985 89999974 56764 443 5788999999875
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.6e-25 Score=239.65 Aligned_cols=226 Identities=18% Similarity=0.252 Sum_probs=163.5
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHH-HHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCC
Q 002984 589 TERRAIFLDYDGTVVPETSIIKSPGPE-VISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNK 666 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~-~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~ 666 (861)
.++|+|+||+||||++ +.+.+++. +.++|+++ +++|+.|+++|||+...+..++..+. ..++++.||+.+...+
T Consensus 35 M~iKli~fDlDGTLld---~~~~i~~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~ 110 (304)
T 3l7y_A 35 MSVKVIATDMDGTFLN---SKGSYDHNRFQRILKQL-QERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKN 110 (304)
T ss_dssp -CCSEEEECCCCCCSC---TTSCCCHHHHHHHHHHH-HHTTCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETT
T ss_pred eeeEEEEEeCCCCCCC---CCCccCHHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECC
Confidence 4689999999999999 88899998 89999999 68899999999999999999887654 3578999999998776
Q ss_pred cceEEecCCccChHHHHHHHHHHHHHhhcCCC----------ceEeeccc------------eeE-e-eeccC-Cccc--
Q 002984 667 TSEWETNHLGADLEWKKIVEPVMRSYTEATDG----------SNIEIKES------------ALV-W-HHQDA-DPDF-- 719 (861)
Q Consensus 667 ~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~g----------s~ie~k~~------------~l~-~-~~~~~-d~~~-- 719 (861)
...+...++ .+.+.++++.+.+..++ .++..... ... . .+.+. ....
T Consensus 111 ~~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~k 184 (304)
T 3l7y_A 111 QSLIEVFQQ------REDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFFK 184 (304)
T ss_dssp EEEEECCCC------HHHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCEEE
T ss_pred EEEEEecCC------HHHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHcCcCCeEE
Confidence 655554433 22344444444332111 11111000 000 0 00000 0000
Q ss_pred -----hhccHHHHHHHHHHHhcC-CCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHH
Q 002984 720 -----GSCQAKELLDHLESVLAN-EPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFE 793 (861)
Q Consensus 720 -----~~~~a~el~~~L~~~l~~-~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~ 793 (861)
......++.+.+.+.+.+ ....+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++||+
T Consensus 185 i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~l---gi~~~e~i~~GDs~NDi~m~~ 261 (304)
T 3l7y_A 185 LTLQVKEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRW---NFTSDHLMAFGDGGNDIEMLK 261 (304)
T ss_dssp EEEECCGGGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHH
T ss_pred EEEEcCHHHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHh---CcCHHHEEEECCCHHHHHHHH
Confidence 012334566666655554 34556778889999999999999999999999 999999999999999999999
Q ss_pred HccccCCCCCCCCCCceEEEEeCCCC----cccceecCC--HhHHHHHHHHHHh
Q 002984 794 SILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDD--ATDVLKLLQGLAT 841 (861)
Q Consensus 794 ~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d--~~eV~~~L~~L~~ 841 (861)
.+|. +|+|||+. ..|+|++++ .++|+++|+++..
T Consensus 262 ~ag~--------------~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~ 301 (304)
T 3l7y_A 262 LAKY--------------SYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLA 301 (304)
T ss_dssp HCTE--------------EEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred hcCC--------------eEEcCCcCHHHHHhccEEcCCCCcchHHHHHHHHHH
Confidence 9985 79999974 778899876 4669999999875
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-24 Score=231.07 Aligned_cols=226 Identities=17% Similarity=0.151 Sum_probs=160.1
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc----CCceEecCcEEEEeC
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE----MLGIAAEHGYFIRWN 665 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~----~lgliaenG~~i~~~ 665 (861)
++|+|+||+||||++ +.+.++++++++|+++ +++|+.|+++|||+...+..++..+. ...+++.||+.+...
T Consensus 4 ~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~ 79 (279)
T 4dw8_A 4 KYKLIVLDLDGTLTN---SKKEISSRNRETLIRI-QEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINW 79 (279)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEET
T ss_pred cceEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEEC
Confidence 479999999999999 8899999999999999 68899999999999999999887664 256899999999853
Q ss_pred --CcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeE----------------eeeccCC--------c--
Q 002984 666 --KTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALV----------------WHHQDAD--------P-- 717 (861)
Q Consensus 666 --~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~----------------~~~~~~d--------~-- 717 (861)
+...+...++.. .+.++++.+.+..-...+........ ..+...+ +
T Consensus 80 ~~~~~~~~~~l~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (279)
T 4dw8_A 80 ESKEMMYENVLPNE------VVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVA 153 (279)
T ss_dssp TTCCEEEECCCCGG------GHHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCS
T ss_pred CCCeEEEEecCCHH------HHHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCce
Confidence 344444433321 12333333322100000111000000 0000000 0
Q ss_pred cc----hhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHH
Q 002984 718 DF----GSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFE 793 (861)
Q Consensus 718 ~~----~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~ 793 (861)
.+ ......++.+.+.+.+......+.++..++|+.|+++||+.+++++++++ |++++++++|||+.||++||+
T Consensus 154 ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~m~~ 230 (279)
T 4dw8_A 154 KCLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENI---GMTREEVIAIGDGYNDLSMIK 230 (279)
T ss_dssp CEEEESCHHHHHHHHHHHHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCChhhHHHHH
Confidence 00 00123445555655555555667788999999999999999999999999 999999999999999999999
Q ss_pred HccccCCCCCCCCCCceEEEEeCCCC----cccceecCC--HhHHHHHHHHHHhh
Q 002984 794 SILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDD--ATDVLKLLQGLATA 842 (861)
Q Consensus 794 ~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d--~~eV~~~L~~L~~~ 842 (861)
.+|. +|+|||+. ..|+|++++ .++|.++|+++...
T Consensus 231 ~ag~--------------~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~ 271 (279)
T 4dw8_A 231 FAGM--------------GVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIFNV 271 (279)
T ss_dssp HSSE--------------EEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHC--
T ss_pred HcCc--------------EEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHHHHhc
Confidence 9985 89999973 678898865 67899999998754
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=232.17 Aligned_cols=224 Identities=16% Similarity=0.257 Sum_probs=159.5
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcce
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSE 669 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~ 669 (861)
|+|+|+||+||||++ +.+.++++++++|+++ +++|+.|+++|||+...+..++..++..++++.||+.+...+...
T Consensus 4 M~kli~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 79 (274)
T 3fzq_A 4 LYKLLILDIDGTLRD---EVYGIPESAKHAIRLC-QKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELL 79 (274)
T ss_dssp CCCEEEECSBTTTBB---TTTBCCHHHHHHHHHH-HHTTCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEE
T ss_pred cceEEEEECCCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEE
Confidence 579999999999999 7889999999999999 789999999999999999988877655568999999998776666
Q ss_pred EEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeE----------------------ee-----------ecc--
Q 002984 670 WETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALV----------------------WH-----------HQD-- 714 (861)
Q Consensus 670 ~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~----------------------~~-----------~~~-- 714 (861)
+...++. +.+.++++.+.+..-...+........ |. ..+
T Consensus 80 ~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (274)
T 3fzq_A 80 YNQSFNQ------RLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYK 153 (274)
T ss_dssp EECCCCH------HHHHHHHHHHHHHTCEEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGCS
T ss_pred EEcCCCH------HHHHHHHHHHHHCCceEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhhc
Confidence 6654432 233344433332111111111000000 00 000
Q ss_pred CCc--cchhccHHHHHHHHHHHhcCCCEEEEEcC--eEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHH
Q 002984 715 ADP--DFGSCQAKELLDHLESVLANEPAVVKRGQ--HIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDED 790 (861)
Q Consensus 715 ~d~--~~~~~~a~el~~~L~~~l~~~~~~v~~g~--~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~ 790 (861)
..+ .+......+..+.+.+.+......+.++. .++|+.|++++|+.+++++++++ |++++++++|||+.||++
T Consensus 154 ~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~ 230 (274)
T 3fzq_A 154 SQDIHKICLWSNEKVFDEVKDILQDKMELAQRDISSQYYEIIQKDFHKGKAIKRLQERL---GVTQKETICFGDGQNDIV 230 (274)
T ss_dssp SCCCCEEEEECCHHHHHHHHHHHGGGEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHH---TCCSTTEEEECCSGGGHH
T ss_pred ccCeEEEEEEcCHHHHHHHHHHhhcceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHc---CCCHHHEEEECCChhHHH
Confidence 000 00001123344455555544334455666 89999999999999999999999 999999999999999999
Q ss_pred HHHHccccCCCCCCCCCCceEEEEeCCCC----cccceecCC--HhHHHHHHHHHH
Q 002984 791 MFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDD--ATDVLKLLQGLA 840 (861)
Q Consensus 791 Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d--~~eV~~~L~~L~ 840 (861)
||+.+|. +|+||+++ ..|+|++++ .++|.+.|+++.
T Consensus 231 m~~~ag~--------------~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~~~ 272 (274)
T 3fzq_A 231 MFQASDV--------------TIAMKNSHQQLKDIATSICEDIFDNGIYKELKRRN 272 (274)
T ss_dssp HHHTCSE--------------EEEETTSCHHHHHHCSEEECCGGGTHHHHHHHHTT
T ss_pred HHHhcCc--------------eEEecCccHHHHHhhhheeCCCchhHHHHHHHHhC
Confidence 9999985 78999973 678898865 578999998863
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.2e-24 Score=242.54 Aligned_cols=312 Identities=17% Similarity=0.155 Sum_probs=233.4
Q ss_pred HHHHHHHHHHHHHHHHHH----cCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCCh---HHHhcC-------
Q 002984 177 WQAYVSANKIFADKVMEV----INPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS---EIYRTL------- 242 (861)
Q Consensus 177 w~~Y~~vN~~fa~~v~~~----~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~f~~l------- 242 (861)
+..+....+.....+... .+| |+|++|+++..+++.++++ ..++++.+.+|.+++.. ..+..-
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~--Dii~~~~~~~~~~~~~~~~-~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~ 175 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLP--DVVHFHDWHTVFAGALIKK-YFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAP 175 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCC--SEEEEESGGGHHHHHHHHH-HHCCCEEEEESCCCCCCEEHHHHHHTTCGGGCC
T ss_pred hhhhHHHHHHHHHHHHHHhccCCCC--eEEEecchhhhhhHHHHhh-ccCCCEEEEecccccccCchHHhCccccccccc
Confidence 444555555555544443 245 9999999999888888874 45789999999998641 122111
Q ss_pred -CchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhH
Q 002984 243 -PVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATA 321 (861)
Q Consensus 243 -p~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~ 321 (861)
....-....+-.+|.|-+.+..+++.... .++.. ..++.++|+|||.+.|.+....+...
T Consensus 176 ~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~~---------------~~~i~vi~ngvd~~~~~~~~~~~~~~ 236 (439)
T 3fro_A 176 YPDIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRNF---------------EGKITYVFNGIDCSFWNESYLTGSRD 236 (439)
T ss_dssp SSEECHHHHHHHHCSEEEESCHHHHHHTHH----HHGGG---------------TTSEEECCCCCCTTTSCGGGSCSCHH
T ss_pred cceeeHhhhhhhhccEEEecCHHHHHHHhh----hhhhc---------------CCceeecCCCCCchhcCcccccchhh
Confidence 11133444556799999999887776322 11111 12467899999999886543333344
Q ss_pred HHHHHHHHHc--CCCeEEEeecCcc-cccCHHHHHHHHHHHHHhC--CCCCCcEEEEEEecCCCCChhHHHHHHHHHHHH
Q 002984 322 TKIKEIEKQF--DGKKLILGIDDMD-IFKGISLKLLAMEQLLQQH--PGMRGKVVLVQIVNPARGSGKDVQEAKKETYLT 396 (861)
Q Consensus 322 ~~~~~l~~~~--~~~~vil~Vdrld-~~KGi~~~l~Af~~ll~~~--P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l 396 (861)
.....+++++ .++++|+++||+. +.||+..+++|++++.+++ |+++ |+.+|.. + .++.++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~----l~i~G~g-----~--~~~~~~l~~~ 305 (439)
T 3fro_A 237 ERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FIIIGKG-----D--PELEGWARSL 305 (439)
T ss_dssp HHHHHHHHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEE----EEEECCC-----C--HHHHHHHHHH
T ss_pred hhHHHHHHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCCeE----EEEEcCC-----C--hhHHHHHHHH
Confidence 5556677776 3449999999999 9999999999999998866 6654 8888832 2 2344555555
Q ss_pred HHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceE
Q 002984 397 AKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSML 476 (861)
Q Consensus 397 ~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~l 476 (861)
+++.+ .++++.+.++.+++..+|+.||++|+||..||||++++|||+| |.|+
T Consensus 306 ~~~~~---------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~-------------------G~Pv 357 (439)
T 3fro_A 306 EEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL-------------------GAIP 357 (439)
T ss_dssp HHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHT-------------------TCEE
T ss_pred HhhcC---------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHC-------------------CCCe
Confidence 55432 4778899999999999999999999999999999999999999 5679
Q ss_pred EeccCCCCcccC--CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHHHH
Q 002984 477 VVSEFIGCSPSL--SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACR 549 (861)
Q Consensus 477 V~Se~~G~~~~l--~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 549 (861)
|+|+.+|..+.+ ..|++++|.|++++|++|.++++++++.+....++.++++..+++..+++++++-++++.+
T Consensus 358 i~s~~~~~~e~~~~~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 358 IASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp EEESSTHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSC
T ss_pred EEcCCCCcceeEEcCceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHH
Confidence 999998888888 3589999999999999999999976677777778888888889999999999887776543
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=5e-24 Score=229.90 Aligned_cols=227 Identities=12% Similarity=0.124 Sum_probs=160.9
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCC-ceEecCcEEEEeC-Cc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML-GIAAEHGYFIRWN-KT 667 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l-gliaenG~~i~~~-~~ 667 (861)
++|+|+||+||||++ +.+.++++++++|+++ +++|+.|+++|||+...+..++..+... ++++.||+.+... +.
T Consensus 5 ~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 80 (290)
T 3dnp_A 5 SKQLLALNIDGALLR---SNGKIHQATKDAIEYV-KKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDA 80 (290)
T ss_dssp -CCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTS
T ss_pred cceEEEEcCCCCCCC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCC
Confidence 479999999999999 8889999999999999 6889999999999999998888766433 7899999999853 33
Q ss_pred ceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeE-------------------------eeeccC-------
Q 002984 668 SEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALV-------------------------WHHQDA------- 715 (861)
Q Consensus 668 ~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~-------------------------~~~~~~------- 715 (861)
..+...++ .+.+.++++.+.+..-...+........ ..+...
T Consensus 81 ~~~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (290)
T 3dnp_A 81 PFFEKRIS------DDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDE 154 (290)
T ss_dssp CSEECCCC------HHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHS
T ss_pred EEEecCCC------HHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcC
Confidence 34444332 3445556655544211111111100000 000000
Q ss_pred C-c--cc----hhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcch
Q 002984 716 D-P--DF----GSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSD 788 (861)
Q Consensus 716 d-~--~~----~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND 788 (861)
. + .+ ......++.+.+.. +......+.++..++|+.|++++||.|++++++++ |++++++++|||+.||
T Consensus 155 ~~~~~ki~~~~~~~~~~~~~~~l~~-~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~ND 230 (290)
T 3dnp_A 155 PVSAPVIEVYTEHDIQHDITETITK-AFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASEL---GLSMDDVVAIGHQYDD 230 (290)
T ss_dssp CCCCSEEEEECCGGGHHHHHHHHHH-HCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGGG
T ss_pred CCCceEEEEeCCHHHHHHHHHHHHh-hCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHc---CCCHHHEEEECCchhh
Confidence 0 0 00 01123344444422 22333456678899999999999999999999999 9999999999999999
Q ss_pred HHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccceecCC--HhHHHHHHHHHHhhcC
Q 002984 789 EDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDD--ATDVLKLLQGLATASS 844 (861)
Q Consensus 789 ~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d--~~eV~~~L~~L~~~~~ 844 (861)
++||+.+|. +|+|||+. ..|+|++.+ .++|.++|+++.....
T Consensus 231 i~m~~~ag~--------------~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~~ 278 (290)
T 3dnp_A 231 LPMIELAGL--------------GVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQQ 278 (290)
T ss_dssp HHHHHHSSE--------------EEECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC--------------EEEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHHhcC
Confidence 999999985 79999974 778898865 5669999999886543
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-23 Score=223.21 Aligned_cols=226 Identities=18% Similarity=0.238 Sum_probs=163.5
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHH-HHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEV-ISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKT 667 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~-~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~ 667 (861)
++|+|+||+||||++ +++.+++++ +++|+++ +++|+.|+|+|||++..+.+++..+. ..++|++||+.+...+.
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~ 77 (271)
T 1rlm_A 2 AVKVIVTDMDGTFLN---DAKTYNQPRFMAQYQEL-KKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGK 77 (271)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHHH-HHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTE
T ss_pred CccEEEEeCCCCCCC---CCCcCCHHHHHHHHHHH-HHCCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCe
Confidence 478999999999999 788899995 9999999 68999999999999999998886653 35789999999987665
Q ss_pred ceEEecCCccChHHHHHHHHHHHHHhhcC---------CCceEeeccc------------eeEe--eeccC-Ccc--c--
Q 002984 668 SEWETNHLGADLEWKKIVEPVMRSYTEAT---------DGSNIEIKES------------ALVW--HHQDA-DPD--F-- 719 (861)
Q Consensus 668 ~~~~~~~~~~~~~w~~~v~~i~~~y~~~~---------~gs~ie~k~~------------~l~~--~~~~~-d~~--~-- 719 (861)
..+...++ .+.+..+++.+.+.. .+.+...... .+.. .+... ++. +
T Consensus 78 ~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~i 151 (271)
T 1rlm_A 78 QLFHGELT------RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSL 151 (271)
T ss_dssp EEEECCCC------HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEE
T ss_pred EEEEecCC------HHHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEEE
Confidence 55554433 234445555443321 1222211100 0000 00000 000 0
Q ss_pred --hhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 720 --GSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 720 --~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
......++.+++.+.+......+.++..++||.|++++|+.+++++++++ |++++++++|||+.||++|++.+|.
T Consensus 152 ~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l---~i~~~~~~~~GD~~nD~~m~~~ag~ 228 (271)
T 1rlm_A 152 NLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRW---DLSPQNVVAIGDSGNDAEMLKMARY 228 (271)
T ss_dssp ECCGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCSE
T ss_pred EcCHHHHHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHh---CCCHHHEEEECCcHHHHHHHHHcCC
Confidence 01224556666665555544556678889999999999999999999999 9999999999999999999999986
Q ss_pred cCCCCCCCCCCceEEEEeCCCC----cccceecCC--HhHHHHHHHHHHhh
Q 002984 798 TVSGPSLPVPPEIFACTVGRKP----SKAKYYLDD--ATDVLKLLQGLATA 842 (861)
Q Consensus 798 ~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d--~~eV~~~L~~L~~~ 842 (861)
+|+||++. ..|+|++.+ .++|.++|+++...
T Consensus 229 --------------~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~~~ 265 (271)
T 1rlm_A 229 --------------SFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDN 265 (271)
T ss_dssp --------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHT
T ss_pred --------------eEEeCCccHHHHHhCCeeCcCCCCChHHHHHHHHHhh
Confidence 68899873 578898876 46799999998753
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-23 Score=221.82 Aligned_cols=223 Identities=16% Similarity=0.198 Sum_probs=154.7
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcce
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSE 669 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~ 669 (861)
++|+|+||+||||++ +++.+++.++++|+++ ++.|+.|+++|||+...+..++..+...++++.||+.+...+...
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i 77 (258)
T 2pq0_A 2 GRKIVFFDIDGTLLD---EQKQLPLSTIEAVRRL-KQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVL 77 (258)
T ss_dssp CCCEEEECTBTTTBC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEE
T ss_pred CceEEEEeCCCCCcC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEE
Confidence 368999999999999 7788999999999999 789999999999999998888766543347899999998876555
Q ss_pred EEecCCccChHHHHHHHHHHHHHhhcC-------CCc-eEeecc-cee-------EeeeccCCccc---------hhccH
Q 002984 670 WETNHLGADLEWKKIVEPVMRSYTEAT-------DGS-NIEIKE-SAL-------VWHHQDADPDF---------GSCQA 724 (861)
Q Consensus 670 ~~~~~~~~~~~w~~~v~~i~~~y~~~~-------~gs-~ie~k~-~~l-------~~~~~~~d~~~---------~~~~a 724 (861)
+...++ .+.+..+++.+.+.. ... +..... ... ...+....+.+ .....
T Consensus 78 ~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 151 (258)
T 2pq0_A 78 YKQPLR------REKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCR 151 (258)
T ss_dssp EECCCC------HHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSC
T ss_pred EEecCC------HHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECC
Confidence 554433 233444444443321 111 111000 000 00000000000 00011
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCC
Q 002984 725 KELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSL 804 (861)
Q Consensus 725 ~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~ 804 (861)
++....+.+.+.. ...+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.+|.
T Consensus 152 ~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~ia~GDs~NDi~ml~~ag~------- 220 (258)
T 2pq0_A 152 AEEEEPYVRNYPE-FRFVRWHDVSTDVLPAGGSKAEGIRMMIEKL---GIDKKDVYAFGDGLNDIEMLSFVGT------- 220 (258)
T ss_dssp HHHHHHHHHHCTT-EEEEEEETTEEEEEESSCCHHHHHHHHHHHH---TCCGGGEEEECCSGGGHHHHHHSSE-------
T ss_pred HHHHHHHHHhCCC-eEEEEeCCceEEEEECCCChHHHHHHHHHHh---CCCHHHEEEECCcHHhHHHHHhCCc-------
Confidence 1222333333322 2345567889999999999999999999999 9999999999999999999999996
Q ss_pred CCCCceEEEEeCCC----CcccceecCC--HhHHHHHHHHHH
Q 002984 805 PVPPEIFACTVGRK----PSKAKYYLDD--ATDVLKLLQGLA 840 (861)
Q Consensus 805 ~~~~~~~av~vG~~----~s~Aky~l~d--~~eV~~~L~~L~ 840 (861)
+|+|||+ +..|+|++++ .++|.+.|+++.
T Consensus 221 -------~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~~~ 255 (258)
T 2pq0_A 221 -------GVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQLQ 255 (258)
T ss_dssp -------EEEETTCCHHHHHTCSEEECCGGGTHHHHHHHHTT
T ss_pred -------EEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHHhC
Confidence 7889986 3678898864 578999998764
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=8.1e-24 Score=225.54 Aligned_cols=223 Identities=18% Similarity=0.162 Sum_probs=152.4
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEE-EeCCc
Q 002984 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFI-RWNKT 667 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i-~~~~~ 667 (861)
.|+|+|+||+||||++. ..+.++++++++|+++ +++|+.|+++|||+...+ +.+..++..++++.||+.+ ...+.
T Consensus 10 ~miKli~~DlDGTLl~~--~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~-~~~~~l~~~~~i~~nGa~i~~~~~~ 85 (268)
T 3r4c_A 10 HMIKVLLLDVDGTLLSF--ETHKVSQSSIDALKKV-HDSGIKIVIATGRAASDL-HEIDAVPYDGVIALNGAECVLRDGS 85 (268)
T ss_dssp SCCCEEEECSBTTTBCT--TTCSCCHHHHHHHHHH-HHTTCEEEEECSSCTTCC-GGGTTSCCCEEEEGGGTEEEETTSC
T ss_pred CceEEEEEeCCCCCcCC--CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChHHh-HHHHhcCCCcEEEeCCcEEEEcCCe
Confidence 36899999999999982 2578999999999999 688999999999999887 4455555556899999999 77665
Q ss_pred ceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEe---------------eeccCCc---cc--------hh
Q 002984 668 SEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVW---------------HHQDADP---DF--------GS 721 (861)
Q Consensus 668 ~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~---------------~~~~~d~---~~--------~~ 721 (861)
..+...++ .+.+.++++.+.+..-...+...+..... .+..... +. ..
T Consensus 86 ~~~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (268)
T 3r4c_A 86 VIRKVAIP------AQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCF 159 (268)
T ss_dssp EEEECCCC------HHHHHHHHHHHHHTTCEEEEEETTEEEESCCCHHHHHHHHHHTCCCCCBCCHHHHHHHSCCCCEEE
T ss_pred EEEEecCC------HHHHHHHHHHHHHcCcEEEEEECCEEEEeCCcHHHHHHHHHcCCCCCcccchHHHhccCceEEEEE
Confidence 55554433 22344444444321111111111100000 0000000 00 00
Q ss_pred ccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCC
Q 002984 722 CQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSG 801 (861)
Q Consensus 722 ~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~ 801 (861)
....+....+.+.+. ....+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.+|.
T Consensus 160 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~ia~GD~~NDi~m~~~ag~---- 231 (268)
T 3r4c_A 160 YFDEEAEQKVMPLLS-GLSATRWHPLFADVNVAGTSKATGLSLFADYY---RVKVSEIMACGDGGNDIPMLKAAGI---- 231 (268)
T ss_dssp ECCHHHHHHHGGGCT-TEEEEEEETTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHHHSSE----
T ss_pred ecChHHHHHHHHhCC-CcEEEEecCCeEEEeeCCCCHHHHHHHHHHHc---CCCHHHEEEECCcHHhHHHHHhCCC----
Confidence 000112222222222 12456677889999999999999999999999 9999999999999999999999985
Q ss_pred CCCCCCCceEEEEeCCCC----cccceecCC--HhHHHHHHHHH
Q 002984 802 PSLPVPPEIFACTVGRKP----SKAKYYLDD--ATDVLKLLQGL 839 (861)
Q Consensus 802 ~~~~~~~~~~av~vG~~~----s~Aky~l~d--~~eV~~~L~~L 839 (861)
+|+|||+. ..|+|++.+ .++|++.|+++
T Consensus 232 ----------~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~ 265 (268)
T 3r4c_A 232 ----------GVAMGNASEKVQSVADFVTDTVDNSGLYKALKHF 265 (268)
T ss_dssp ----------EEECTTSCHHHHHTCSEECCCTTTTHHHHHHHHT
T ss_pred ----------eEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHHh
Confidence 89999973 678898864 68899999886
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-23 Score=225.37 Aligned_cols=228 Identities=15% Similarity=0.191 Sum_probs=154.5
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCC----ceEecCcEEEEe-
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML----GIAAEHGYFIRW- 664 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l----gliaenG~~i~~- 664 (861)
++|+|+||+||||++ .++.++++++++|+++ +++|+.|+++|||++..+..++..++.. .++++||+.+..
T Consensus 4 m~kli~~DlDGTLl~---~~~~i~~~~~~aL~~l-~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~ 79 (282)
T 1rkq_A 4 AIKLIAIDMDGTLLL---PDHTISPAVKNAIAAA-RARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKA 79 (282)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEET
T ss_pred cceEEEEeCCCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEEC
Confidence 579999999999999 7889999999999999 6899999999999999999988766422 489999999987
Q ss_pred -CCcceEEecCCccChHHHHHHHHHHHHHhh-----cCCCceEeecc---c--------eeEeee---ccC--Cccch--
Q 002984 665 -NKTSEWETNHLGADLEWKKIVEPVMRSYTE-----ATDGSNIEIKE---S--------ALVWHH---QDA--DPDFG-- 720 (861)
Q Consensus 665 -~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~-----~~~gs~ie~k~---~--------~l~~~~---~~~--d~~~~-- 720 (861)
.+...+...++ ..+...+...++.+.- ...+.+...+. . .+.... .+. +..+.
T Consensus 80 ~~~~~i~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki 156 (282)
T 1rkq_A 80 ADGSTVAQTALS---YDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKV 156 (282)
T ss_dssp TTCCEEEECCBC---HHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEE
T ss_pred CCCeEEEEecCC---HHHHHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEE
Confidence 44445655433 2222222222222100 01122222110 0 000000 000 00000
Q ss_pred -h----ccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHc
Q 002984 721 -S----CQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESI 795 (861)
Q Consensus 721 -~----~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a 795 (861)
. ....++.+.+.+.+......+.++..++||.|++++|+.+++++++++ |++++++++|||+.||++||+.+
T Consensus 157 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~~nD~~m~~~a 233 (282)
T 1rkq_A 157 MMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVL---GIKPEEIMAIGDQENDIAMIEYA 233 (282)
T ss_dssp EEECCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHS
T ss_pred EEECCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEecCCCCCCHHHHHHHHHHh---CCCHHHEEEECCcHHHHHHHHHC
Confidence 0 011222222222222222345578889999999999999999999999 99999999999999999999999
Q ss_pred cccCCCCCCCCCCceEEEEeCCCC----cccceecCC--HhHHHHHHHHHHh
Q 002984 796 LSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDD--ATDVLKLLQGLAT 841 (861)
Q Consensus 796 g~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d--~~eV~~~L~~L~~ 841 (861)
|. +|+||++. ..|+|++++ .++|+++|+++..
T Consensus 234 g~--------------~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~~~ 271 (282)
T 1rkq_A 234 GV--------------GVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVL 271 (282)
T ss_dssp SE--------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHTT
T ss_pred Cc--------------EEEecCCcHHHHhhCCEEecCCCcchHHHHHHHHHh
Confidence 85 78898863 478898865 5779999999864
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-23 Score=227.52 Aligned_cols=227 Identities=16% Similarity=0.147 Sum_probs=158.8
Q ss_pred ccceEEEecCCccccCCCCC-CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHh--cccc--C---CceEecCcE
Q 002984 589 TERRAIFLDYDGTVVPETSI-IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWL--APCE--M---LGIAAEHGY 660 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~-~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~--~~~~--~---lgliaenG~ 660 (861)
.++|+|+||+||||++ . ++.++++++++|++| +++|+.|+++|||++..+..++ ..++ . .++|++||+
T Consensus 25 M~ikli~~DlDGTLl~---~~~~~is~~~~~al~~l-~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa 100 (301)
T 2b30_A 25 ADIKLLLIDFDGTLFV---DKDIKVPSENIDAIKEA-IEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGT 100 (301)
T ss_dssp CCCCEEEEETBTTTBC---CTTTCSCHHHHHHHHHH-HHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGT
T ss_pred ccccEEEEECCCCCcC---CCCCccCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCe
Confidence 3579999999999999 7 788999999999999 6889999999999999999888 6553 2 368999999
Q ss_pred EEEe-CCcceEEecCCccChHHHHHHHHHHHHHhhc----------CCCceEeecc-ce--------eEeeeccC-----
Q 002984 661 FIRW-NKTSEWETNHLGADLEWKKIVEPVMRSYTEA----------TDGSNIEIKE-SA--------LVWHHQDA----- 715 (861)
Q Consensus 661 ~i~~-~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~----------~~gs~ie~k~-~~--------l~~~~~~~----- 715 (861)
.+.. .+...+...++. +.+..+++...+. ..+.+..... .. ..+++...
T Consensus 101 ~i~~~~~~~i~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (301)
T 2b30_A 101 IVYDQIGYTLLDETIET------DVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEML 174 (301)
T ss_dssp EEECTTCCEEEECCCCH------HHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHT
T ss_pred EEEeCCCCEEEEccCCH------HHHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecchhhh
Confidence 9987 455555544432 2233333322211 0112221110 00 00011100
Q ss_pred C--cc--c----hhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcc
Q 002984 716 D--PD--F----GSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRS 787 (861)
Q Consensus 716 d--~~--~----~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~N 787 (861)
+ +- + ......++.+.+.+.+......+.++..++||.|++++||.+++++++++ |++++++++|||+.|
T Consensus 175 ~~~~i~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~~n 251 (301)
T 2b30_A 175 KYRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHY---NISNDQVLVVGDAEN 251 (301)
T ss_dssp TCCCCSEEEECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGG
T ss_pred ccCCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEeCCcceEecCCCCCcHHHHHHHHHHc---CCCHHHEEEECCCHH
Confidence 0 00 0 00123445555555443332345567789999999999999999999999 999999999999999
Q ss_pred hHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccceecC-C--HhHHHHHHHHHHhh
Q 002984 788 DEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLD-D--ATDVLKLLQGLATA 842 (861)
Q Consensus 788 D~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~-d--~~eV~~~L~~L~~~ 842 (861)
|++||+.+|. +|+||++. ..|+|+++ + .++|+++|+++...
T Consensus 252 D~~m~~~ag~--------------~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~~~~ 299 (301)
T 2b30_A 252 DIAMLSNFKY--------------SFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL 299 (301)
T ss_dssp GHHHHHSCSE--------------EEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred HHHHHHHcCC--------------eEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHHHHhc
Confidence 9999999985 78899864 47889887 5 57899999998653
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=5.8e-24 Score=228.05 Aligned_cols=226 Identities=15% Similarity=0.131 Sum_probs=133.2
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccC----CceEecCcEEEEeC
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM----LGIAAEHGYFIRWN 665 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~----lgliaenG~~i~~~ 665 (861)
++|+|+||+||||++ +.+.++++++++|+++ +++|+.|+++|||+...+..++..+.. ..++++||+.+...
T Consensus 4 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~ 79 (279)
T 3mpo_A 4 TIKLIAIDIDGTLLN---EKNELAQATIDAVQAA-KAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTI 79 (279)
T ss_dssp -CCEEEECC--------------CHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEET
T ss_pred ceEEEEEcCcCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECC
Confidence 579999999999999 8889999999999999 688999999999999999998876532 25899999944333
Q ss_pred Ccc-eEEecCCccChHHHHHHHHHHHHHhhcC--------CCceEeeccc-----------eeEeeec---cC--Cccc-
Q 002984 666 KTS-EWETNHLGADLEWKKIVEPVMRSYTEAT--------DGSNIEIKES-----------ALVWHHQ---DA--DPDF- 719 (861)
Q Consensus 666 ~~~-~~~~~~~~~~~~w~~~v~~i~~~y~~~~--------~gs~ie~k~~-----------~l~~~~~---~~--d~~~- 719 (861)
.+. .+...++ .+.+.++++.+.+.. .+.+...... .....+. +. ...+
T Consensus 80 ~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (279)
T 3mpo_A 80 SGKVLTNHSLT------YEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTIS 153 (279)
T ss_dssp TSCEEEECCCC------HHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCC
T ss_pred CCCEEEecCCC------HHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcE
Confidence 333 3333322 223444444443321 1111111000 0000000 00 0000
Q ss_pred --h----hccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHH
Q 002984 720 --G----SCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFE 793 (861)
Q Consensus 720 --~----~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~ 793 (861)
. .....++.+.+.+.+.+....+.++..++||+|+++||+.|++++++++ |++++++++|||+.||++||+
T Consensus 154 ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~m~~ 230 (279)
T 3mpo_A 154 KAMFVDYPQVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQL---GLTADDVMTLGDQGNDLTMIK 230 (279)
T ss_dssp EEEEECCHHHHHHHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHT---TCCGGGEEEC--CCTTHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCchhhHHHHH
Confidence 0 0112233333333333323456678899999999999999999999999 999999999999999999999
Q ss_pred HccccCCCCCCCCCCceEEEEeCCC----CcccceecCC--HhHHHHHHHHHHhh
Q 002984 794 SILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLDD--ATDVLKLLQGLATA 842 (861)
Q Consensus 794 ~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~d--~~eV~~~L~~L~~~ 842 (861)
.+|. +|+|||+ +..|+|++.+ .++|+++|+++...
T Consensus 231 ~ag~--------------~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~ 271 (279)
T 3mpo_A 231 YAGL--------------GVAMGNAIDEVKEAAQAVTLTNAENGVAAAIRKYALN 271 (279)
T ss_dssp HSTE--------------ECBC---CCHHHHHCSCBC------CHHHHHC-----
T ss_pred hcCc--------------eeeccCCCHHHHHhcceeccCCCccHHHHHHHHHhcc
Confidence 9996 7888886 3678888854 57799999987654
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-22 Score=217.65 Aligned_cols=223 Identities=16% Similarity=0.108 Sum_probs=155.7
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCC--ceEecCcEEEEe-CC
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML--GIAAEHGYFIRW-NK 666 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l--gliaenG~~i~~-~~ 666 (861)
|+|+|+||+||||++ +++.++++++++|++ +++|+.|+++|||+...+..++..++.. +++++||+.+.. .+
T Consensus 1 mikli~~DlDGTLl~---~~~~i~~~~~~al~~--~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~ 75 (268)
T 1nf2_A 1 MYRVFVFDLDGTLLN---DNLEISEKDRRNIEK--LSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEE 75 (268)
T ss_dssp CBCEEEEECCCCCSC---TTSCCCHHHHHHHHH--HTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTT
T ss_pred CccEEEEeCCCcCCC---CCCccCHHHHHHHHH--HhCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCC
Confidence 478999999999999 788999999999999 4899999999999999999988765422 589999999988 44
Q ss_pred cceEEecCCccChHHHHHHHHHHHHHhhc--------CCCceEeecc---------ceeEee-eccCCc-----cch---
Q 002984 667 TSEWETNHLGADLEWKKIVEPVMRSYTEA--------TDGSNIEIKE---------SALVWH-HQDADP-----DFG--- 720 (861)
Q Consensus 667 ~~~~~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~---------~~l~~~-~~~~d~-----~~~--- 720 (861)
...+...++ .+.+..+++.+.+. ..+.+...+. ..+... +...+. .+.
T Consensus 76 ~~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~ 149 (268)
T 1nf2_A 76 GVILNEKIP------PEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLL 149 (268)
T ss_dssp EEEEECCBC------HHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEE
T ss_pred CEEEecCCC------HHHHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEE
Confidence 444444333 22334444443321 1112221110 000000 000000 000
Q ss_pred ----hccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcc
Q 002984 721 ----SCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESIL 796 (861)
Q Consensus 721 ----~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 796 (861)
.....++.+.+.+.+......+.++..++||.|++++|+.+++++++++ |++++++++|||+.||++|++.+|
T Consensus 150 ~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~ag 226 (268)
T 1nf2_A 150 LIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERM---NWKKEEIVVFGDNENDLFMFEEAG 226 (268)
T ss_dssp EECCHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHTTCS
T ss_pred EECCHHHHHHHHHHHHHHhcCCEEEEEecCceEEEeCCCCChHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHHcC
Confidence 0112234444544443334455678889999999999999999999999 999999999999999999999998
Q ss_pred ccCCCCCCCCCCceEEEEeCCCC----cccceecCC--HhHHHHHHHHHH
Q 002984 797 STVSGPSLPVPPEIFACTVGRKP----SKAKYYLDD--ATDVLKLLQGLA 840 (861)
Q Consensus 797 ~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d--~~eV~~~L~~L~ 840 (861)
. +|+||++. ..|+|++++ .++|.++|+++.
T Consensus 227 ~--------------~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~~~ 262 (268)
T 1nf2_A 227 L--------------RVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIS 262 (268)
T ss_dssp E--------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBC
T ss_pred C--------------EEEecCCCHHHHhhCCEEEccCCcchHHHHHHHHH
Confidence 5 78899863 468888865 578999998765
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-23 Score=220.95 Aligned_cols=219 Identities=17% Similarity=0.234 Sum_probs=139.8
Q ss_pred HHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc----c-cCCceEec
Q 002984 583 VSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP----C-EMLGIAAE 657 (861)
Q Consensus 583 ~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~----~-~~lgliae 657 (861)
..+|+..++|+|++||||||++ .++.++++++++|++| +++ +.|+|+|||++..+.+.++. + ...++|+.
T Consensus 5 ~~~~~~~~~kli~~DlDGTLl~---~~~~is~~~~~al~~l-~~~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~~~I~~ 79 (262)
T 2fue_A 5 AQAARRKERVLCLFDVDGTLTP---ARQKIDPEVAAFLQKL-RSR-VQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAE 79 (262)
T ss_dssp --------CEEEEEESBTTTBS---TTSCCCHHHHHHHHHH-TTT-SEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEG
T ss_pred cccccccCeEEEEEeCccCCCC---CCCcCCHHHHHHHHHH-HhC-CEEEEEcCCCHHHHHHHHhhhhcccccCCeEEEC
Confidence 3567788899999999999999 7889999999999999 677 99999999999998888753 1 12468999
Q ss_pred CcEEEEeCCcceEEecCCc-cChHHHHHHHHHHHHHhh--------cCCCceEeeccceeEee-e-ccCCcc----chh-
Q 002984 658 HGYFIRWNKTSEWETNHLG-ADLEWKKIVEPVMRSYTE--------ATDGSNIEIKESALVWH-H-QDADPD----FGS- 721 (861)
Q Consensus 658 nG~~i~~~~~~~~~~~~~~-~~~~w~~~v~~i~~~y~~--------~~~gs~ie~k~~~l~~~-~-~~~d~~----~~~- 721 (861)
||+.+..++..++...++. .+ .+.+..+++...+ ..++.+++.+.....+. + +..+.. +..
T Consensus 80 NGa~i~~~~~~i~~~~~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (262)
T 2fue_A 80 NGTVQYKHGRLLSKQTIQNHLG---EELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSEL 156 (262)
T ss_dssp GGTEEEETTEECCCCCHHHHHC---HHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHH
T ss_pred CCcEEEeCCeEEEEeeccccCC---HHHHHHHHHHHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCCcccccccEEEE
Confidence 9999988665444432110 01 2233333322211 12344444332221111 1 111110 000
Q ss_pred ----ccHHHHHHHHHHHhcCCCEEEE-EcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeC----CcchHHHH
Q 002984 722 ----CQAKELLDHLESVLANEPAVVK-RGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGD----DRSDEDMF 792 (861)
Q Consensus 722 ----~~a~el~~~L~~~l~~~~~~v~-~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf 792 (861)
....++.+.+.+.+.+..+.+. ++..++||.|+++|||.|+++| + |+++++++|||| +.||++||
T Consensus 157 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~vsKg~al~~l---~---gi~~~~viafGDs~~~~~NDi~Ml 230 (262)
T 2fue_A 157 DKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSL---D---QDSFDTIHFFGNETSPGGNDFEIF 230 (262)
T ss_dssp HHHHCHHHHHHHHHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHH---T---TSCCSEEEEEESCCSTTSTTHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCceEEEEECCCcEEEEecCCCCHHHHHHHH---H---CCCHHHEEEECCCCCCCCCCHHHH
Confidence 0122333445444443234444 4677899999999999999999 6 999999999999 99999999
Q ss_pred HHccccCCCCCCCCCCceEEEEeCCC----CcccceecCC
Q 002984 793 ESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLDD 828 (861)
Q Consensus 793 ~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~d 828 (861)
+.+|. .+++|||+ +..|+|++++
T Consensus 231 ~~~~~-------------~g~av~NA~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 231 ADPRT-------------VGHSVVSPQDTVQRCREIFFPE 257 (262)
T ss_dssp HSTTS-------------EEEECSSHHHHHHHHHHHHCTT
T ss_pred hcCcc-------------CcEEecCCCHHHHHhhheeCCC
Confidence 99874 37788886 3556666544
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.2e-23 Score=217.36 Aligned_cols=217 Identities=17% Similarity=0.169 Sum_probs=150.5
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc-c--cCCceEecCcEEEEeCC
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP-C--EMLGIAAEHGYFIRWNK 666 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~-~--~~lgliaenG~~i~~~~ 666 (861)
++|+|+||+||||++ +++.++++++++|+++ +++|+.|+++|||++..+.+.++. + ...+++++||+.+...+
T Consensus 3 ~~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l-~~~g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i~~NGa~i~~~~ 78 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTP---PRLCQTDEMRALIKRA-RGAGFCVGTVGGSDFAKQVEQLGRDVLTQFDYVFAENGLLAYRNG 78 (246)
T ss_dssp CSEEEEECSBTTTBS---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHCTTHHHHCSEEEEGGGTEEEETT
T ss_pred CceEEEEeCcCCcCC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHhhhhccccCCEEEECCCcEEEECC
Confidence 589999999999999 7889999999999999 689999999999999998888752 1 12468999999999987
Q ss_pred cceEEecCC-ccChHHHHHHHHHHHHHh-----hcCCCceEeeccceeEee--eccCCc----cchhcc-----HHHHHH
Q 002984 667 TSEWETNHL-GADLEWKKIVEPVMRSYT-----EATDGSNIEIKESALVWH--HQDADP----DFGSCQ-----AKELLD 729 (861)
Q Consensus 667 ~~~~~~~~~-~~~~~w~~~v~~i~~~y~-----~~~~gs~ie~k~~~l~~~--~~~~d~----~~~~~~-----a~el~~ 729 (861)
..+|...++ ..+.+....+...++.+. ....+.+++.+...+.+. ...... .+..+. ..++.+
T Consensus 79 ~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (246)
T 3f9r_A 79 LEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIA 158 (246)
T ss_dssp EEEEECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred EEEEEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEecccchHHHHHHH
Confidence 767765432 011222222222222221 123456776665444332 111110 111110 134455
Q ss_pred HHHHHhcCCC-EEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCC----cchHHHHHHccccCCCCCC
Q 002984 730 HLESVLANEP-AVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDD----RSDEDMFESILSTVSGPSL 804 (861)
Q Consensus 730 ~L~~~l~~~~-~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~----~ND~~Mf~~ag~~~~~~~~ 804 (861)
.+.+.+.+.. ..+.++..++||+|+|+|||.|+++|++ ++++++||||+ .||++||+.+|.
T Consensus 159 ~l~~~~~~~~~~~~~sg~~~leI~~~gv~Kg~al~~L~~-------~~~ev~afGD~~~~g~NDi~Ml~~a~~------- 224 (246)
T 3f9r_A 159 ELENSFPDFGLKYSIGGQISFDVFPVGWDKTYCLQFVED-------DFEEIHFFGDKTQEGGNDYEIYTDKRT------- 224 (246)
T ss_dssp HHHHHCGGGCEEEEEETTTEEEEEETTCSGGGGGGGTTT-------TCSEEEEEESCCSTTSTTHHHHTCTTS-------
T ss_pred HHHhhCcCCcEEEEecCCeEEEEEeCCCCHHHHHHHHHc-------CcccEEEEeCCCCCCCCCHHHHhCCCc-------
Confidence 5665555543 3578899999999999999999999976 68999999996 999999997763
Q ss_pred CCCCceEEEEeCCCCcccceecCCHhHHHHHHHHHHh
Q 002984 805 PVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGLAT 841 (861)
Q Consensus 805 ~~~~~~~av~vG~~~s~Aky~l~d~~eV~~~L~~L~~ 841 (861)
.+++|+ ++.+.++.|+.|+.
T Consensus 225 ------~g~~v~-----------n~~~~~~~~~~~~~ 244 (246)
T 3f9r_A 225 ------IGHKVT-----------SYKDTIAEVEKIIA 244 (246)
T ss_dssp ------EEEECS-----------SHHHHHHHHHHHHH
T ss_pred ------cEEEeC-----------CHHHHHHHHHHHhc
Confidence 255554 57777888877763
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=218.51 Aligned_cols=226 Identities=14% Similarity=0.117 Sum_probs=133.9
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCC--ceEecCcEEEEeCC-
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML--GIAAEHGYFIRWNK- 666 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l--gliaenG~~i~~~~- 666 (861)
++|+|++|+||||++ .++.++++++++|++| +++|+.|+|+|||++..+..++..++.. ++|++||+.+...+
T Consensus 8 ~~~li~~DlDGTLl~---~~~~~~~~~~~~l~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~ 83 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLD---SHSYDWQPAAPWLTRL-REANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQ 83 (275)
T ss_dssp CCEEEEEECTTTTSC---SSCCSCCTTHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTT
T ss_pred CceEEEEeCCCCCCC---CCCcCCHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCc
Confidence 579999999999999 6667788899999999 6899999999999999999998776432 59999999997332
Q ss_pred -c-----ceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccce-------eEeee--------ccCCccchhccHH
Q 002984 667 -T-----SEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESA-------LVWHH--------QDADPDFGSCQAK 725 (861)
Q Consensus 667 -~-----~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~-------l~~~~--------~~~d~~~~~~~a~ 725 (861)
. ..+...++. +.+..+++.+.+..+..+....... ....+ ......+......
T Consensus 84 ~~~~~~~~~~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (275)
T 1xvi_A 84 WQEIDGFPRIISGISH------GEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSD 157 (275)
T ss_dssp CTTSTTTTEEECSSCH------HHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCH
T ss_pred ccccCceEEEecCCCH------HHHHHHHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCH
Confidence 2 224444332 2233333322211011110000000 00000 0000000000112
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCC-CCCCe--EEEEeCCcchHHHHHHccccCCCC
Q 002984 726 ELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGG-RPPDF--VMCVGDDRSDEDMFESILSTVSGP 802 (861)
Q Consensus 726 el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~g-i~~d~--vlaiGD~~ND~~Mf~~ag~~~~~~ 802 (861)
+..+.+.+.+....+.+..+..++||.|++++||.|++++++++ | +++++ +++|||+.||++||+.+|.
T Consensus 158 ~~~~~~~~~l~~~~~~~~~~~~~leI~~~~~~K~~~l~~l~~~~---~~~~~~~~~~~~~GD~~nD~~m~~~ag~----- 229 (275)
T 1xvi_A 158 ERMAQFTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATY---QQLSGKRPTTLGLGDGPNDAPLLEVMDY----- 229 (275)
T ss_dssp HHHHHHHHHHHHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHH---HHHHSSCCEEEEEESSGGGHHHHHTSSE-----
T ss_pred HHHHHHHHHHHhhCeEEEECCceEEEecCCCCHHHHHHHHHHHh---hhcccccCcEEEECCChhhHHHHHhCCc-----
Confidence 33334443333334556667788999999999999999999999 8 88999 9999999999999999985
Q ss_pred CCCCCCceEEEEeCCCC----c-----ccc-eecC--CHhHHHHHHHHHHhh
Q 002984 803 SLPVPPEIFACTVGRKP----S-----KAK-YYLD--DATDVLKLLQGLATA 842 (861)
Q Consensus 803 ~~~~~~~~~av~vG~~~----s-----~Ak-y~l~--d~~eV~~~L~~L~~~ 842 (861)
+|+||++. . .|+ |+++ +.++|+++|+++...
T Consensus 230 ---------~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~~~l~~ 272 (275)
T 1xvi_A 230 ---------AVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDHFFSA 272 (275)
T ss_dssp ---------EEECCCCC-----------------------------------
T ss_pred ---------eEEecCCCccchhhccccCCceeEccCCCchHHHHHHHHHHHh
Confidence 68888752 2 267 7774 467899999987653
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=99.89 E-value=9.3e-23 Score=215.15 Aligned_cols=204 Identities=16% Similarity=0.190 Sum_probs=135.4
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc-c--cCCceEecCcEEEEeC
Q 002984 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP-C--EMLGIAAEHGYFIRWN 665 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~-~--~~lgliaenG~~i~~~ 665 (861)
+++|+|++|+||||++ +++.++++++++|++| +++ +.|+|+|||+...+.+.++. + ...++|++||+.+..+
T Consensus 4 ~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~I~~NGa~i~~~ 78 (246)
T 2amy_A 4 PGPALCLFDVDGTLTA---PRQKITKEMDDFLQKL-RQK-IKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKD 78 (246)
T ss_dssp CCSEEEEEESBTTTBC---TTSCCCHHHHHHHHHH-TTT-SEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEET
T ss_pred CCceEEEEECCCCcCC---CCcccCHHHHHHHHHH-HhC-CeEEEEcCCCHHHHHHHhccccccccCEEEECCCcEEEeC
Confidence 4679999999999999 7888999999999999 677 99999999999888877741 1 1236899999999987
Q ss_pred CcceEEecCCc-cChHHHHHHHHHHHHHh--------hcCCCceEeeccceeEee-e-ccCCc----cchhc-----cHH
Q 002984 666 KTSEWETNHLG-ADLEWKKIVEPVMRSYT--------EATDGSNIEIKESALVWH-H-QDADP----DFGSC-----QAK 725 (861)
Q Consensus 666 ~~~~~~~~~~~-~~~~w~~~v~~i~~~y~--------~~~~gs~ie~k~~~l~~~-~-~~~d~----~~~~~-----~a~ 725 (861)
+...|...++. .+ .+.+..+++... ...++.+.+.+.....+. + ..... .+... ...
T Consensus 79 ~~~i~~~~l~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (246)
T 2amy_A 79 GKLLCRQNIQSHLG---EALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQ 155 (246)
T ss_dssp TEEEEECCHHHHHC---HHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHH
T ss_pred CcEEEeeecccccC---HHHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhhhhhheeecCCHHHHH
Confidence 66566543210 01 122233322211 112345544333222211 1 11110 01000 112
Q ss_pred HHHHHHHHHhcCCCEEE-EEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeC----CcchHHHHHHccccCC
Q 002984 726 ELLDHLESVLANEPAVV-KRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGD----DRSDEDMFESILSTVS 800 (861)
Q Consensus 726 el~~~L~~~l~~~~~~v-~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~~ 800 (861)
++.+.+.+.+....+.+ .++..++||.|+++|||.|++++ + |+++++++|||| +.||++||+.+|.
T Consensus 156 ~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~~~Kg~al~~l---~---~i~~~~viafGD~~~~~~ND~~Ml~~a~~--- 226 (246)
T 2amy_A 156 KFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHV---E---NDGYKTIYFFGDKTMPGGNDHEIFTDPRT--- 226 (246)
T ss_dssp HHHHHHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGT---T---TSCCSEEEEEECSCC---CCCHHHHCTTE---
T ss_pred HHHHHHHHhcCCCcEEEEEcCCcEEEEecCCCchHHHHHHH---h---CCCHHHEEEECCCCCCCCCcHHHHHhCCc---
Confidence 33444554444323444 45788999999999999999999 6 999999999999 9999999999875
Q ss_pred CCCCCCCCceEEEEeCCCC
Q 002984 801 GPSLPVPPEIFACTVGRKP 819 (861)
Q Consensus 801 ~~~~~~~~~~~av~vG~~~ 819 (861)
.+++|||++
T Consensus 227 ----------ag~av~Na~ 235 (246)
T 2amy_A 227 ----------MGYSVTAPE 235 (246)
T ss_dssp ----------EEEECSSHH
T ss_pred ----------ceEEeeCCC
Confidence 478999863
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.89 E-value=6.2e-22 Score=206.84 Aligned_cols=214 Identities=17% Similarity=0.163 Sum_probs=153.9
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCcc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS 668 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~~ 668 (861)
|+|+|+||+||||++ +++.+++.++++|+++ +++|+.|+++|||+...+..++..+. ...++++||+.+...+..
T Consensus 2 m~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (231)
T 1wr8_A 2 KIKAISIDIDGTITY---PNRMIHEKALEAIRRA-ESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 77 (231)
T ss_dssp CCCEEEEESTTTTBC---TTSCBCHHHHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEE
T ss_pred ceeEEEEECCCCCCC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEE
Confidence 479999999999999 7889999999999999 68999999999999999988876653 234889999988775544
Q ss_pred eEEecCCccChHHHHHHHHHHHHHhhcCCCceEeec-cc---eeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEE
Q 002984 669 EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIK-ES---ALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKR 744 (861)
Q Consensus 669 ~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k-~~---~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~ 744 (861)
.|...+ +.+.++++.+.+..||..+... .. .+.+..... ..+..+.+.+.+......+ +
T Consensus 78 ~~~~~l--------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~ 140 (231)
T 1wr8_A 78 IFLASM--------DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETI--------NVETVREIINELNLNLVAV-D 140 (231)
T ss_dssp EESCCC--------SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTS--------CHHHHHHHHHHTTCSCEEE-E
T ss_pred EEeccH--------HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCC--------CHHHHHHHHHhcCCcEEEE-e
Confidence 444332 2233444444323344332100 00 011110000 1222333333344333334 8
Q ss_pred cCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----c
Q 002984 745 GQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----S 820 (861)
Q Consensus 745 g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s 820 (861)
+..++|+.|++++|+.+++++++++ |++++++++|||+.||++|++.+|. +|+||++. .
T Consensus 141 ~~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~iGD~~nD~~~~~~ag~--------------~v~~~~~~~~~~~ 203 (231)
T 1wr8_A 141 SGFAIHVKKPWINKGSGIEKASEFL---GIKPKEVAHVGDGENDLDAFKVVGY--------------KVAVAQAPKILKE 203 (231)
T ss_dssp CSSCEEEECTTCCHHHHHHHHHHHH---TSCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHT
T ss_pred cCcEEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCC--------------eEEecCCCHHHHh
Confidence 8889999999999999999999999 9999999999999999999999986 57788763 5
Q ss_pred ccceecCCH--hHHHHHHHHHHh
Q 002984 821 KAKYYLDDA--TDVLKLLQGLAT 841 (861)
Q Consensus 821 ~Aky~l~d~--~eV~~~L~~L~~ 841 (861)
.|+|++++. ++|.++|+++..
T Consensus 204 ~a~~v~~~~~e~Gv~~~l~~~~~ 226 (231)
T 1wr8_A 204 NADYVTKKEYGEGGAEAIYHILE 226 (231)
T ss_dssp TCSEECSSCHHHHHHHHHHHHHH
T ss_pred hCCEEecCCCcchHHHHHHHHHH
Confidence 788998764 569999998764
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=210.40 Aligned_cols=212 Identities=12% Similarity=0.105 Sum_probs=150.0
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCC-ceEecCcEEEEeC-Cc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML-GIAAEHGYFIRWN-KT 667 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l-gliaenG~~i~~~-~~ 667 (861)
++|+|++|+||||++ .++.++++++++|++| +++|+.|+++|||+...+..++..++.. +++++||+.+... +.
T Consensus 4 m~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l-~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 79 (227)
T 1l6r_A 4 MIRLAAIDVDGNLTD---RDRLISTKAIESIRSA-EKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 79 (227)
T ss_dssp CCCEEEEEHHHHSBC---TTSCBCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSC
T ss_pred ceEEEEEECCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCC
Confidence 579999999999999 7888999999999999 6899999999999999999988765422 4899999999863 33
Q ss_pred ce-EEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCc-cchhccHHHHHHHHHHHhcCCCEEEEEc
Q 002984 668 SE-WETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADP-DFGSCQAKELLDHLESVLANEPAVVKRG 745 (861)
Q Consensus 668 ~~-~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~-~~~~~~a~el~~~L~~~l~~~~~~v~~g 745 (861)
.. |...+ +.+..+ +...+. + ..+. .....++..+. ........+..+.+.+.+ .+.+.++
T Consensus 80 ~i~~~~~l--------~~~~~i-~~~~~~----~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 141 (227)
T 1l6r_A 80 IKKFFSNE--------GTNKFL-EEMSKR----T-SMRS-ILTNRWREASTGFDIDPEDVDYVRKEAESR---GFVIFYS 141 (227)
T ss_dssp EEESSCSH--------HHHHHH-HHHTTT----S-SCBC-CGGGGGCSSSEEEBCCGGGHHHHHHHHHTT---TEEEEEE
T ss_pred EEEEeccH--------HHHHHH-HHHHHH----h-cCCc-cccccceecccceEEecCCHHHHHHHHHhc---CEEEEec
Confidence 33 32221 333344 332221 1 0000 00000000000 000011123333443333 3444488
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cc
Q 002984 746 QHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SK 821 (861)
Q Consensus 746 ~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~ 821 (861)
..++||.|++++|+.+++++++++ |++++++++|||+.||++||+.+|. +|+||++. ..
T Consensus 142 ~~~~ei~~~~~~K~~~l~~l~~~~---~~~~~~~~~iGD~~nD~~m~~~ag~--------------~va~~n~~~~~k~~ 204 (227)
T 1l6r_A 142 GYSWHLMNRGEDKAFAVNKLKEMY---SLEYDEILVIGDSNNDMPMFQLPVR--------------KACPANATDNIKAV 204 (227)
T ss_dssp TTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHTSSSE--------------EEECTTSCHHHHHH
T ss_pred CcEEEEecCCCCHHHHHHHHHHHh---CcCHHHEEEECCcHHhHHHHHHcCc--------------eEEecCchHHHHHh
Confidence 899999999999999999999999 9999999999999999999999985 68888863 56
Q ss_pred cceecCC--HhHHHHHHHHHH
Q 002984 822 AKYYLDD--ATDVLKLLQGLA 840 (861)
Q Consensus 822 Aky~l~d--~~eV~~~L~~L~ 840 (861)
|+|++++ .++|.++|+++.
T Consensus 205 a~~v~~~~~~~Gv~~~l~~~~ 225 (227)
T 1l6r_A 205 SDFVSDYSYGEEIGQIFKHFE 225 (227)
T ss_dssp CSEECSCCTTHHHHHHHHHTT
T ss_pred CCEEecCCCCcHHHHHHHHHh
Confidence 8888865 578999998764
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6.8e-22 Score=221.23 Aligned_cols=288 Identities=17% Similarity=0.174 Sum_probs=211.1
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHH-HHhhcCCEEeecChHhHHHH
Q 002984 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEIL-RGLLNCDLIGFHTFDYARHF 269 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il-~~ll~~dligF~t~~~~~~F 269 (861)
+++..+| |+||+|+...+.+...+.++....++.+.+|...+ .+...+....+. ..+-.+|.|-+.+....+.+
T Consensus 81 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 155 (394)
T 3okp_A 81 IIREREI--DNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV---GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRF 155 (394)
T ss_dssp HHHHTTC--SEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH---HHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHH
T ss_pred HHHhcCC--CEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh---hhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHH
Confidence 3455577 89999987766444444444443468999995422 222223333333 33456899999998766666
Q ss_pred HHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccc
Q 002984 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIF 346 (861)
Q Consensus 270 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~ 346 (861)
.... +. ..++.++|+|||.+.|. +........+++++ .++++|+++||+++.
T Consensus 156 ~~~~----~~----------------~~~~~vi~ngv~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~ 210 (394)
T 3okp_A 156 KSAF----GS----------------HPTFEHLPSGVDVKRFT-----PATPEDKSATRKKLGFTDTTPVIACNSRLVPR 210 (394)
T ss_dssp HHHH----CS----------------SSEEEECCCCBCTTTSC-----CCCHHHHHHHHHHTTCCTTCCEEEEESCSCGG
T ss_pred HHhc----CC----------------CCCeEEecCCcCHHHcC-----CCCchhhHHHHHhcCCCcCceEEEEEeccccc
Confidence 5421 11 12577899999998774 21223345667776 356899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHH
Q 002984 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (861)
Q Consensus 347 KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~a 426 (861)
||+..+++|++++.+++|+++ |+.+|. ++..+.+++.+ . +..+.+.+.+.++.+++..
T Consensus 211 Kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l~~~~----~---------~~~~~v~~~g~~~~~~~~~ 268 (394)
T 3okp_A 211 KGQDSLIKAMPQVIAARPDAQ----LLIVGS-----GRYESTLRRLA----T---------DVSQNVKFLGRLEYQDMIN 268 (394)
T ss_dssp GCHHHHHHHHHHHHHHSTTCE----EEEECC-----CTTHHHHHHHT----G---------GGGGGEEEEESCCHHHHHH
T ss_pred cCHHHHHHHHHHHHhhCCCeE----EEEEcC-----chHHHHHHHHH----h---------cccCeEEEcCCCCHHHHHH
Confidence 999999999999999999876 887773 34434443322 1 1224567778899999999
Q ss_pred HHHhcccceecccc-------cCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC--CceEeCCC
Q 002984 427 YYAVAECCIVNAVR-------DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS--GAIRVNPW 497 (861)
Q Consensus 427 ly~~ADv~vvtS~~-------EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~vnP~ 497 (861)
+|+.||++|+||.. ||||++++|||+| +.|+|+|..+|..+.+. .|++++|.
T Consensus 269 ~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~-------------------G~PvI~~~~~~~~e~i~~~~g~~~~~~ 329 (394)
T 3okp_A 269 TLAAADIFAMPARTRGGGLDVEGLGIVYLEAQAC-------------------GVPVIAGTSGGAPETVTPATGLVVEGS 329 (394)
T ss_dssp HHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHT-------------------TCCEEECSSTTGGGGCCTTTEEECCTT
T ss_pred HHHhCCEEEecCccccccccccccCcHHHHHHHc-------------------CCCEEEeCCCChHHHHhcCCceEeCCC
Confidence 99999999999999 9999999999999 56699999988888884 47999999
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhcc-CCHhHHHHHHHHHHHHHHHh
Q 002984 498 DIDAVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQDLERACRD 550 (861)
Q Consensus 498 d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~fl~~l~~~~~~ 550 (861)
|++++|++|.++++ .++.++...++.++++.+ +++..+++++++-+++....
T Consensus 330 d~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~ 382 (394)
T 3okp_A 330 DVDKLSELLIELLD-DPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRK 382 (394)
T ss_dssp CHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC-
T ss_pred CHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccC
Confidence 99999999999998 556666667777887765 89999999998888765433
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-22 Score=213.64 Aligned_cols=219 Identities=14% Similarity=0.191 Sum_probs=150.4
Q ss_pred eEEEecCCccccCCCCCCCC-CCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc----CCceEecCcEEEEeCC
Q 002984 592 RAIFLDYDGTVVPETSIIKS-PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE----MLGIAAEHGYFIRWNK 666 (861)
Q Consensus 592 klI~~DlDGTLl~~~~~~~~-~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~----~lgliaenG~~i~~~~ 666 (861)
|+|+||+||||++ +++. +++.++++|+++ ++.|+.|+++|||+ ..+..++..++ ..+++++||+.+...+
T Consensus 3 kli~~DlDGTLl~---~~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~ 77 (261)
T 2rbk_A 3 KALFFDIDGTLVS---FETHRIPSSTIEALEAA-HAKGLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVGE 77 (261)
T ss_dssp CEEEECSBTTTBC---TTTSSCCHHHHHHHHHH-HHTTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEETT
T ss_pred cEEEEeCCCCCcC---CCCCcCCHHHHHHHHHH-HHCCCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEECC
Confidence 8999999999999 7777 999999999999 68899999999999 88877665543 3368999999998765
Q ss_pred cceEEecCCccChHHHHHHHHHHHHHhhc--------CCCceEeeccceeE-eeeccC---------------Cccc--h
Q 002984 667 TSEWETNHLGADLEWKKIVEPVMRSYTEA--------TDGSNIEIKESALV-WHHQDA---------------DPDF--G 720 (861)
Q Consensus 667 ~~~~~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~~~l~-~~~~~~---------------d~~~--~ 720 (861)
...+...++. +.+.++++...+. ..+.+.......+. .++... ++-+ .
T Consensus 78 ~~i~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 151 (261)
T 2rbk_A 78 EVIYKSAIPQ------EEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMT 151 (261)
T ss_dssp EEEEECCCCH------HHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEE
T ss_pred EEEEecCCCH------HHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEE
Confidence 5556554331 2233333322221 11222221100000 111100 0000 0
Q ss_pred hccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCC
Q 002984 721 SCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVS 800 (861)
Q Consensus 721 ~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~ 800 (861)
.....+....+.+.+.+ ...+.++..++||.|++++|+.+++++++++ |++++++++|||+.||++|++.+|.
T Consensus 152 ~~~~~~~~~~~~~~~~~-~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~iGD~~nD~~~~~~ag~--- 224 (261)
T 2rbk_A 152 PFITEEEEKEVLPSIPT-CEIGRWYPAFADVTAKGDTKQKGIDEIIRHF---GIKLEETMSFGDGGNDISMLRHAAI--- 224 (261)
T ss_dssp ECCCHHHHHHHGGGSTT-CEEECSSTTCCEEESTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE---
T ss_pred EEeCHHHHHHHHHhcCC-eEEEEecCCeEEecCCCCChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCc---
Confidence 00111222234333332 2344567789999999999999999999999 9999999999999999999999985
Q ss_pred CCCCCCCCceEEEEeCCCC----cccceecCCHhH--HHHHHHHH
Q 002984 801 GPSLPVPPEIFACTVGRKP----SKAKYYLDDATD--VLKLLQGL 839 (861)
Q Consensus 801 ~~~~~~~~~~~av~vG~~~----s~Aky~l~d~~e--V~~~L~~L 839 (861)
+|+||++. ..|+|++++.++ |.++|+++
T Consensus 225 -----------~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~~~ 258 (261)
T 2rbk_A 225 -----------GVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF 258 (261)
T ss_dssp -----------EEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred -----------eEEecCccHHHHhhCCEEeccCchhhHHHHHHHh
Confidence 78888863 678899988766 99999876
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-21 Score=210.71 Aligned_cols=223 Identities=17% Similarity=0.161 Sum_probs=153.3
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEe-CCc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRW-NKT 667 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~-~~~ 667 (861)
|+|+|+||+||||++ +++.+++.++++|+++ ++.|+.|+++|||+...+..++..+. ...+++.||+.+.. .+.
T Consensus 3 mikli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 78 (288)
T 1nrw_A 3 AMKLIAIDLDGTLLN---SKHQVSLENENALRQA-QRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGR 78 (288)
T ss_dssp -CCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCC
T ss_pred ceEEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCeEEEcCCCc
Confidence 579999999999999 7888999999999999 68999999999999999999987664 23489999999987 444
Q ss_pred ceEEecCCccChHHHHHHHHHHHHHhhc--------CCCceEeecc------c---e----------------------e
Q 002984 668 SEWETNHLGADLEWKKIVEPVMRSYTEA--------TDGSNIEIKE------S---A----------------------L 708 (861)
Q Consensus 668 ~~~~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~------~---~----------------------l 708 (861)
..+...++ .+.+..+++...+. ..+.+..... . . .
T Consensus 79 ~~~~~~~~------~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (288)
T 1nrw_A 79 LYHHETID------KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQS 152 (288)
T ss_dssp EEEECCCC------HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTC
T ss_pred EEEEeeCC------HHHHHHHHHHHHHCCcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHHHhhhhhhhhcC
Confidence 44544433 23344444433221 0111211100 0 0 0
Q ss_pred Eeee----ccC-----Cccchh----ccHHHHHHHHHHHhcCC-C-EEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCC
Q 002984 709 VWHH----QDA-----DPDFGS----CQAKELLDHLESVLANE-P-AVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGG 773 (861)
Q Consensus 709 ~~~~----~~~-----d~~~~~----~~a~el~~~L~~~l~~~-~-~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~g 773 (861)
.+.+ .+. +..... ....+..+.+.+.+... . ..+.++..++||.|++++||.+++++++++ |
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~lei~~~~~~K~~~~~~~~~~~---~ 229 (288)
T 1nrw_A 153 GFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQL---N 229 (288)
T ss_dssp CEEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHT---T
T ss_pred CceEcCCHHHhhccccCCCceEEEEEcCCHHHHHHHHHHHhhCCCEEEEeeCCCcEEEecCCCChHHHHHHHHHHh---C
Confidence 0110 000 000000 01123344444444322 2 334567789999999999999999999999 9
Q ss_pred CCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccceecCC--HhHHHHHHHHH
Q 002984 774 RPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDD--ATDVLKLLQGL 839 (861)
Q Consensus 774 i~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d--~~eV~~~L~~L 839 (861)
++++++++|||+.||++|++.+|. +|+||++. ..|+|++++ .++|.++|+++
T Consensus 230 ~~~~~~~~~GD~~nD~~m~~~ag~--------------~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~~~ 287 (288)
T 1nrw_A 230 IPLEETAAVGDSLNDKSMLEAAGK--------------GVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL 287 (288)
T ss_dssp CCGGGEEEEESSGGGHHHHHHSSE--------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCc--------------EEEEcCCCHHHHhhCceeecCCCcChHHHHHHHh
Confidence 999999999999999999999985 67888863 468888865 57799999875
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.2e-22 Score=232.64 Aligned_cols=294 Identities=16% Similarity=0.122 Sum_probs=196.8
Q ss_pred CCEEEEeCcccccHHHHHHhhc------CCCeEEEEEecCC-----CChHHHh-cCCc--------------------hH
Q 002984 199 DDCVWVHDYHLMVLPTFLRKRF------NRIKLGFFLHSPF-----PSSEIYR-TLPV--------------------RD 246 (861)
Q Consensus 199 ~D~VwvhDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~f~-~lp~--------------------r~ 246 (861)
+|++++||+|-.++|.+++... .++++.|+.|-.- |....-. .+|. -.
T Consensus 154 ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 233 (536)
T 3vue_A 154 DVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKIN 233 (536)
T ss_dssp CEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEE
T ss_pred CEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchh
Confidence 4788999999999999998765 3689999999642 1111000 0111 02
Q ss_pred HHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCC--------c
Q 002984 247 EILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNL--------P 318 (861)
Q Consensus 247 ~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~--------~ 318 (861)
-+..++..||.|-.-+..|++..++... .|. .++...+..+|.++|+|||.+.|.+.... .
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~~~--~g~---------~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~ 302 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISGIA--RGC---------ELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDAT 302 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTTCC--CCS---------SSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTT
T ss_pred HHHHHHHhccEEEEcCHHHhhhhhcccc--ccc---------ccccccccCCeEEEECCcchhhcCCCCccccccccchh
Confidence 3566788899999889988887654110 011 01112244468889999999988642110 0
Q ss_pred h----hHHHHHHHHHHc-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHH
Q 002984 319 A----TATKIKEIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEA 389 (861)
Q Consensus 319 ~----~~~~~~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~ 389 (861)
. .......+++.+ .+.++|++|||+++.||+..+++|+++++++++ + |+.+|.. +.. .
T Consensus 303 ~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~--~----l~l~G~G---~~~----~ 369 (536)
T 3vue_A 303 TAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV--Q----IVLLGTG---KKK----F 369 (536)
T ss_dssp THHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC--E----EEEECCB---CHH----H
T ss_pred hhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCC--e----EEEEecc---Cch----H
Confidence 0 112223455554 457899999999999999999999999976543 2 5556532 222 2
Q ss_pred HHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCC
Q 002984 390 KKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERD 469 (861)
Q Consensus 390 ~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~ 469 (861)
...+..++.+.+ ..+.+.+..+.+++..+|+.||+||+||.+||||++++|||+|
T Consensus 370 ~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~---------------- 424 (536)
T 3vue_A 370 EKLLKSMEEKYP---------GKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRY---------------- 424 (536)
T ss_dssp HHHHHHHHHHST---------TTEEEECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHT----------------
T ss_pred HHHHHHHHhhcC---------CceEEEEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHc----------------
Confidence 223333333322 1234556778999999999999999999999999999999999
Q ss_pred CCCCceEEeccCCCCcccCCC---c----------eEeCCCCHHHHHHHHHHHhcCC-HHHHHHHHHHhhhhhccCCHhH
Q 002984 470 SPHTSMLVVSEFIGCSPSLSG---A----------IRVNPWDIDAVADAMTLAINMR-DSEKQLRHEKHYRYVSTHDVAY 535 (861)
Q Consensus 470 ~~~~g~lV~Se~~G~~~~l~~---a----------i~vnP~d~~~~A~ai~~aL~m~-~~e~~~r~~~~~~~v~~~~~~~ 535 (861)
+.|+|+|+.+|+.+.+.+ | ++|+|.|++++|++|.++|..- .++++.+.++.. -..+++.+
T Consensus 425 ---G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~am--~~~fSW~~ 499 (536)
T 3vue_A 425 ---GTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCM--NQDLSWKG 499 (536)
T ss_dssp ---TCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHH--HSCCSSHH
T ss_pred ---CCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHHH--HhcCCHHH
Confidence 567999999999988832 3 4889999999999999998632 222222222211 23578888
Q ss_pred HHHHHHHHHHH
Q 002984 536 WARSFAQDLER 546 (861)
Q Consensus 536 W~~~fl~~l~~ 546 (861)
-++++.+-+.+
T Consensus 500 ~A~~y~~ly~~ 510 (536)
T 3vue_A 500 PAKNWENVLLG 510 (536)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 78777654443
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.2e-22 Score=226.98 Aligned_cols=293 Identities=16% Similarity=0.173 Sum_probs=208.4
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHh-cC----C-chHHHH-HHhhcCCEEeecChHhHHHHHHH
Q 002984 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR-TL----P-VRDEIL-RGLLNCDLIGFHTFDYARHFLSC 272 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~-~l----p-~r~~il-~~ll~~dligF~t~~~~~~Fl~~ 272 (861)
|+|++|++...+++.++.+. .++++.+.+|..++....+. .. + .+..+. ..+-.+|.|-+.+....+.+.+
T Consensus 124 Div~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~- 201 (438)
T 3c48_A 124 DLIHSHYWLSGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMH- 201 (438)
T ss_dssp SEEEEEHHHHHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHH-
T ss_pred CEEEeCCccHHHHHHHHHHH-cCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHH-
Confidence 99999987655555555443 36889999998754211000 00 0 111111 2334689999988876666553
Q ss_pred HHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccccCH
Q 002984 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGI 349 (861)
Q Consensus 273 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi 349 (861)
.+|+. ..++.++|+|||.+.|... .......+++++ .++++|+++||+.+.||+
T Consensus 202 ---~~g~~---------------~~k~~vi~ngvd~~~~~~~-----~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~ 258 (438)
T 3c48_A 202 ---HYDAD---------------PDRISVVSPGADVELYSPG-----NDRATERSRRELGIPLHTKVVAFVGRLQPFKGP 258 (438)
T ss_dssp ---HHCCC---------------GGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGCH
T ss_pred ---HhCCC---------------hhheEEecCCccccccCCc-----ccchhhhhHHhcCCCCCCcEEEEEeeecccCCH
Confidence 22321 1145678999998877421 111222355665 468899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002984 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (861)
Q Consensus 350 ~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 429 (861)
..+++|++.+.+++|+. ++.|+++|.+.. .++..+ ++.+++++. +..+.+.+.+.++.+++..+|+
T Consensus 259 ~~li~a~~~l~~~~p~~--~~~l~i~G~~~~-~g~~~~----~l~~~~~~~-------~l~~~v~~~g~~~~~~~~~~~~ 324 (438)
T 3c48_A 259 QVLIKAVAALFDRDPDR--NLRVIICGGPSG-PNATPD----TYRHMAEEL-------GVEKRIRFLDPRPPSELVAVYR 324 (438)
T ss_dssp HHHHHHHHHHHHHCTTC--SEEEEEECCBC-------C----HHHHHHHHT-------TCTTTEEEECCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCc--ceEEEEEeCCCC-CCcHHH----HHHHHHHHc-------CCCCcEEEcCCCChHHHHHHHH
Confidence 99999999999998842 256888885321 133333 334444432 2334567788999999999999
Q ss_pred hcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHH
Q 002984 430 VAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAM 506 (861)
Q Consensus 430 ~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai 506 (861)
.||++|+||..||||++++|||+| +.|+|+|..+|..+.+. .|++++|.|++++|++|
T Consensus 325 ~adv~v~ps~~e~~~~~~~Eama~-------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i 385 (438)
T 3c48_A 325 AADIVAVPSFNESFGLVAMEAQAS-------------------GTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADAL 385 (438)
T ss_dssp HCSEEEECCSCCSSCHHHHHHHHT-------------------TCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHH
T ss_pred hCCEEEECccccCCchHHHHHHHc-------------------CCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHH
Confidence 999999999999999999999999 56699999988888883 38999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHHHHhh
Q 002984 507 TLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDH 551 (861)
Q Consensus 507 ~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~ 551 (861)
.++++ .++.+....++.++++.++++..+++++++.++++....
T Consensus 386 ~~l~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 429 (438)
T 3c48_A 386 ATLLD-DDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANE 429 (438)
T ss_dssp HHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhc
Confidence 99998 455566666777888877999999999999888877653
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.4e-22 Score=232.35 Aligned_cols=306 Identities=14% Similarity=0.037 Sum_probs=212.2
Q ss_pred cCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHH------------HhcCC--chHHH-HHHhhcCCEEe
Q 002984 195 INPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEI------------YRTLP--VRDEI-LRGLLNCDLIG 259 (861)
Q Consensus 195 ~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~------------f~~lp--~r~~i-l~~ll~~dlig 259 (861)
.+| |+|++|.++..+++.++.+. .++++.+.+|..++.... .+..- .+..+ ...+-.+|.|-
T Consensus 119 ~~~--Divh~~~~~~~~~~~~~~~~-~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 195 (499)
T 2r60_A 119 KFP--QVVTTHYGDGGLAGVLLKNI-KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKII 195 (499)
T ss_dssp CCC--SEEEEEHHHHHHHHHHHHHH-HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEE
T ss_pred CCC--CEEEEcCCcchHHHHHHHHh-cCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEE
Confidence 356 89999998766666666544 368899999986542210 00000 01111 22344688888
Q ss_pred ecChHhHHHHHHHHHHHhC-CccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc-------
Q 002984 260 FHTFDYARHFLSCCSRMLG-LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF------- 331 (861)
Q Consensus 260 F~t~~~~~~Fl~~~~r~lg-~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~------- 331 (861)
+.+...++.+... ..+| +.. .....++.++|+|||.+.|... ........+++++
T Consensus 196 ~~S~~~~~~~~~~--~~~g~~~~-----------~~~~~ki~vi~ngvd~~~~~~~----~~~~~~~~~r~~~~~~~~~~ 258 (499)
T 2r60_A 196 VSTSQERFGQYSH--DLYRGAVN-----------VEDDDKFSVIPPGVNTRVFDGE----YGDKIKAKITKYLERDLGSE 258 (499)
T ss_dssp ESSHHHHHHTTTS--GGGTTTCC-----------TTCGGGEEECCCCBCTTTSSSC----CCHHHHHHHHHHHHHHSCGG
T ss_pred ECCHHHHHHHHhh--hccccccc-----------ccCCCCeEEECCCcChhhcCcc----chhhhHHHHHHHhccccccc
Confidence 8887655544320 0012 100 0011246789999999877521 1112223444443
Q ss_pred -CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCC----h---hHHHHHHHHHHHHHHHHhhc
Q 002984 332 -DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGS----G---KDVQEAKKETYLTAKRINEV 403 (861)
Q Consensus 332 -~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~----~---~~~~~~~~~v~~l~~~IN~~ 403 (861)
.++++|+++||+++.||+..+++|+..+.+++|+. +.|+++|... +. + ....++.+++.+++++.
T Consensus 259 ~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~--- 331 (499)
T 2r60_A 259 RMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNN--- 331 (499)
T ss_dssp GTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHT---
T ss_pred CCCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhc---
Confidence 36889999999999999999999999998876653 3467666411 11 0 11233456666666653
Q ss_pred cCCCCcccEEEEcCCCCHHHHHHHHHhc----ccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec
Q 002984 404 YGSPNYEPVVLIDRPVPRFEKSAYYAVA----ECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS 479 (861)
Q Consensus 404 ~~~~~~~pvv~~~~~v~~~el~aly~~A----Dv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S 479 (861)
+..+.+.+.|.++.+++..+|+.| |++|+||..||||++++|||+| |.|+|+|
T Consensus 332 ----~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~-------------------G~PvI~s 388 (499)
T 2r60_A 332 ----DCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMAS-------------------GLPAVVT 388 (499)
T ss_dssp ----TCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHT-------------------TCCEEEE
T ss_pred ----CCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHc-------------------CCCEEEe
Confidence 333456778899999999999999 9999999999999999999999 5669999
Q ss_pred cCCCCcccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhcc-CCHhHHHHHHHHHHHHHHHhh
Q 002984 480 EFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQDLERACRDH 551 (861)
Q Consensus 480 e~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~fl~~l~~~~~~~ 551 (861)
+.+|..+.+. .|++++|.|++++|++|.++++ .++.+....++.++++.+ +++..+++.+++-+.++....
T Consensus 389 ~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 463 (499)
T 2r60_A 389 RNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFE-SEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRK 463 (499)
T ss_dssp SSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC-
T ss_pred cCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 9888888883 3899999999999999999998 555666667777888877 999999999999998877654
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.87 E-value=5.7e-21 Score=220.97 Aligned_cols=298 Identities=17% Similarity=0.116 Sum_probs=204.0
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCCh----HHHhc--CC-------------chHHHHHHhhcCCEEee
Q 002984 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS----EIYRT--LP-------------VRDEILRGLLNCDLIGF 260 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~----e~f~~--lp-------------~r~~il~~ll~~dligF 260 (861)
|+|++|+++..+++.+++.+..++++.+.+|..++.. ..+.. ++ .+.-....+..+|.|-.
T Consensus 131 Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~ 210 (485)
T 2qzs_A 131 DVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITA 210 (485)
T ss_dssp SEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEE
T ss_pred CEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEe
Confidence 9999999998888888864456799999999876421 11111 01 01122334456899888
Q ss_pred cChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeE--EEEEEecccCCchHHHHhhCC-----------chhHHHHHHH
Q 002984 261 HTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRT--VYIKILPVGVHMGRLESVLNL-----------PATATKIKEI 327 (861)
Q Consensus 261 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~--~~i~v~p~GId~~~~~~~~~~-----------~~~~~~~~~l 327 (861)
.+...++.+... ..|..... . + .... .++.++|+|||.+.|...... +........+
T Consensus 211 ~S~~~~~~~~~~---~~~~~~~~---~--~--~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (485)
T 2qzs_A 211 VSPTYAREITEP---QFAYGMEG---L--L--QQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQL 280 (485)
T ss_dssp SSHHHHHHTTSH---HHHTTCHH---H--H--HHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHH
T ss_pred cCHHHHHHHhcc---ccCcchHH---H--H--HhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHH
Confidence 887666554321 01100000 0 0 0000 246789999999887532110 0111223456
Q ss_pred HHHcC-----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhh
Q 002984 328 EKQFD-----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINE 402 (861)
Q Consensus 328 ~~~~~-----~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~ 402 (861)
++++. ++++|+++||+++.||+..+++|++.+.+ ++ +.|+++|.. + .++++++++++.+.
T Consensus 281 r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~g-----~--~~~~~~l~~~~~~~-- 345 (485)
T 2qzs_A 281 QIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QG----GQLALLGAG-----D--PVLQEGFLAAAAEY-- 345 (485)
T ss_dssp HHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TT----CEEEEEEEE-----C--HHHHHHHHHHHHHS--
T ss_pred HHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CC----cEEEEEeCC-----c--hHHHHHHHHHHHhC--
Confidence 66652 67899999999999999999999999876 34 448888842 2 13455555665543
Q ss_pred ccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCC
Q 002984 403 VYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFI 482 (861)
Q Consensus 403 ~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~ 482 (861)
+ ..|+++.+. +.+++..+|+.||++|+||..||||++++|||+| |.|+|+|..+
T Consensus 346 --~----~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~-------------------G~PvI~s~~g 399 (485)
T 2qzs_A 346 --P----GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKY-------------------GTLPLVRRTG 399 (485)
T ss_dssp --T----TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH-------------------TCEEEEESSH
T ss_pred --C----CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHC-------------------CCCEEECCCC
Confidence 1 246667776 7888899999999999999999999999999999 5679999998
Q ss_pred CCcccCC------------CceEeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHHH
Q 002984 483 GCSPSLS------------GAIRVNPWDIDAVADAMTLAIN--MRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERAC 548 (861)
Q Consensus 483 G~~~~l~------------~ai~vnP~d~~~~A~ai~~aL~--m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 548 (861)
|..+.+. .|++++|.|++++|++|.+++. ..++.+....++.++ ..+++...++++++-+++..
T Consensus 400 g~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~ 477 (485)
T 2qzs_A 400 GLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLK 477 (485)
T ss_dssp HHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC
T ss_pred CccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHhh
Confidence 8888873 4799999999999999999994 244545444444432 67899999999888777765
Q ss_pred Hh
Q 002984 549 RD 550 (861)
Q Consensus 549 ~~ 550 (861)
.+
T Consensus 478 ~~ 479 (485)
T 2qzs_A 478 LE 479 (485)
T ss_dssp --
T ss_pred hh
Confidence 44
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=220.95 Aligned_cols=287 Identities=13% Similarity=0.132 Sum_probs=202.5
Q ss_pred HHcCCCCCEEEEeCcccccHHHHHHhh-cC-CCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCC--EEeecChHhHHH
Q 002984 193 EVINPDDDCVWVHDYHLMVLPTFLRKR-FN-RIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCD--LIGFHTFDYARH 268 (861)
Q Consensus 193 ~~~~p~~D~VwvhDyhl~llp~~lr~~-~~-~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~d--ligF~t~~~~~~ 268 (861)
...+| |+|++|.+...+.+.+.+.. .| ..++...+|...+... ..+...+-.+| .|-+.+....+.
T Consensus 78 ~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ii~~S~~~~~~ 147 (413)
T 3oy2_A 78 DVHKP--DIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR--------ENLWWIFSHPKVVGVMAMSKCWISD 147 (413)
T ss_dssp HHHCC--SEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSCC--------GGGGGGGGCTTEEEEEESSTHHHHH
T ss_pred HhcCC--CEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhhH--------HHHHHHHhccCCceEEEcCHHHHHH
Confidence 44577 89999944333333222222 23 3566677775544321 11222234467 888888766555
Q ss_pred HHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---C--CCeEEEeecCc
Q 002984 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---D--GKKLILGIDDM 343 (861)
Q Consensus 269 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~--~~~vil~Vdrl 343 (861)
+.. +|+ ..++.++|+|||.+.|. ..++++ . ++++|+++||+
T Consensus 148 ~~~-----~~~----------------~~~~~vi~ngvd~~~~~-------------~~~~~~~~~~~~~~~~il~vGr~ 193 (413)
T 3oy2_A 148 ICN-----YGC----------------KVPINIVSHFVDTKTIY-------------DARKLVGLSEYNDDVLFLNMNRN 193 (413)
T ss_dssp HHH-----TTC----------------CSCEEECCCCCCCCCCT-------------THHHHTTCGGGTTSEEEECCSCS
T ss_pred HHH-----cCC----------------CCceEEeCCCCCHHHHH-------------HHHHhcCCCcccCceEEEEcCCC
Confidence 543 222 12567899999998761 122333 2 68899999999
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHH
Q 002984 344 DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFE 423 (861)
Q Consensus 344 d~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~e 423 (861)
.+.||+..+++|+.++.+++|+++ |+.+|....... .++++++.+++++.+-.-.-.-+..++.+.|.++.++
T Consensus 194 ~~~Kg~~~li~a~~~l~~~~~~~~----l~ivG~g~~~~~---~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~ 266 (413)
T 3oy2_A 194 TARKRLDIYVLAAARFISKYPDAK----VRFLCNSHHESK---FDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDER 266 (413)
T ss_dssp SGGGTHHHHHHHHHHHHHHCTTCC----EEEEEECCTTCS---CCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHH
T ss_pred chhcCcHHHHHHHHHHHHhCCCcE----EEEEeCCcccch---hhHHHHHHHHHHHcCcccccccccceeeccCcCCHHH
Confidence 999999999999999999999987 888885442211 2244555555554321100000012688999999999
Q ss_pred HHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCCC-------------
Q 002984 424 KSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSG------------- 490 (861)
Q Consensus 424 l~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~------------- 490 (861)
+..+|+.||++|+||..||||++++|||+| |.|+|+|..+|..+.+.+
T Consensus 267 ~~~~~~~adv~v~pS~~E~~~~~~lEAma~-------------------G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 267 VDMMYNACDVIVNCSSGEGFGLCSAEGAVL-------------------GKPLIISAVGGADDYFSGDCVYKIKPSAWIS 327 (413)
T ss_dssp HHHHHHHCSEEEECCSCCSSCHHHHHHHTT-------------------TCCEEEECCHHHHHHSCTTTSEEECCCEEEE
T ss_pred HHHHHHhCCEEEeCCCcCCCCcHHHHHHHc-------------------CCCEEEcCCCChHHHHccCcccccccccccc
Confidence 999999999999999999999999999999 566999999998888843
Q ss_pred -----ce--EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHHHHHHHHHHhh
Q 002984 491 -----AI--RVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLERACRDH 551 (861)
Q Consensus 491 -----ai--~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~~~~~ 551 (861)
|+ +++|.|++++|++| ++++ .+++++.+.++.++++ ..+++..+++++++-++++.+..
T Consensus 328 ~~~~~G~~gl~~~~d~~~la~~i-~l~~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 328 VDDRDGIGGIEGIIDVDDLVEAF-TFFK-DEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp CTTTCSSCCEEEECCHHHHHHHH-HHTT-SHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred cccccCcceeeCCCCHHHHHHHH-HHhc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 77 99999999999999 9987 5666677777788887 46899999999999988876543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-21 Score=203.95 Aligned_cols=213 Identities=17% Similarity=0.212 Sum_probs=141.7
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc---CCceEecCcEEEEeCCc
Q 002984 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE---MLGIAAEHGYFIRWNKT 667 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~---~lgliaenG~~i~~~~~ 667 (861)
.++|++||||||++ .++.+ ++++++|+++ + +|+.|+|+|||++..+.+++..++ ..++|++||+.+.....
T Consensus 3 ~~li~~DlDGTLl~---~~~~~-~~~~~~l~~~-~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~~ 76 (244)
T 1s2o_A 3 QLLLISDLDNTWVG---DQQAL-EHLQEYLGDR-R-GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEG 76 (244)
T ss_dssp SEEEEECTBTTTBS---CHHHH-HHHHHHHHTT-G-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTE
T ss_pred CeEEEEeCCCCCcC---CHHHH-HHHHHHHHHh-c-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCCC
Confidence 35999999999999 44443 6788899886 4 589999999999999999887632 23589999999886421
Q ss_pred --ceEEecCCccChHH-HHHHHHHHHHHhhcCCCceE----eeccceeEeeeccCCccchhccHHHHHHHHHHHhcC--C
Q 002984 668 --SEWETNHLGADLEW-KKIVEPVMRSYTEATDGSNI----EIKESALVWHHQDADPDFGSCQAKELLDHLESVLAN--E 738 (861)
Q Consensus 668 --~~~~~~~~~~~~~w-~~~v~~i~~~y~~~~~gs~i----e~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~--~ 738 (861)
..|...+. ..| .+.+..+. ...++... +.+...+.++..... ..+..+.+.+.+.. .
T Consensus 77 ~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ki~~~~~~~~-------~~~~~~~l~~~~~~~~~ 142 (244)
T 1s2o_A 77 LDQHWADYLS---EHWQRDILQAIA----DGFEALKPQSPLEQNPWKISYHLDPQA-------CPTVIDQLTEMLKETGI 142 (244)
T ss_dssp ECHHHHHHHH---TTCCHHHHHHHH----HTCTTEEECCGGGCBTTBEEEEECTTS-------CTHHHHHHHHHHHTSSC
T ss_pred cChHHHHHHh---ccccHHHHHHHH----HhccCccccCcccCCCeEEEEEeChhh-------HHHHHHHHHHHHHhcCC
Confidence 11111000 011 11111122 22222111 112233333332111 01233344443332 2
Q ss_pred CEE-EEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC
Q 002984 739 PAV-VKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR 817 (861)
Q Consensus 739 ~~~-v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~ 817 (861)
.+. +.++..++||.|++++|+.+++++++++ |++++++++|||+.||++||+.+|. +|+||+
T Consensus 143 ~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~~nD~~m~~~~g~--------------~va~~n 205 (244)
T 1s2o_A 143 PVQVIFSSGKDVDLLPQRSNKGNATQYLQQHL---AMEPSQTLVCGDSGNDIGLFETSAR--------------GVIVRN 205 (244)
T ss_dssp CEEEEEETTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHTSSSE--------------EEECTT
T ss_pred CeEEEEecCceEEeccCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHhccCc--------------EEEEcC
Confidence 333 4577889999999999999999999999 9999999999999999999998875 788998
Q ss_pred CC----cc-------cceecCC--HhHHHHHHHHHH
Q 002984 818 KP----SK-------AKYYLDD--ATDVLKLLQGLA 840 (861)
Q Consensus 818 ~~----s~-------Aky~l~d--~~eV~~~L~~L~ 840 (861)
+. .. |+|++++ .++|++.|+++.
T Consensus 206 a~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~~~ 241 (244)
T 1s2o_A 206 AQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAHFD 241 (244)
T ss_dssp CCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHHTT
T ss_pred CcHHHHHHHhcccccceeecCCcchhHHHHHHHHhc
Confidence 63 22 6788864 577999998764
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=6.6e-22 Score=224.05 Aligned_cols=297 Identities=18% Similarity=0.172 Sum_probs=204.8
Q ss_pred hHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCCh--HHHhcCCchHHHHHH
Q 002984 174 RVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS--EIYRTLPVRDEILRG 251 (861)
Q Consensus 174 ~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~--e~f~~lp~r~~il~~ 251 (861)
...|..|....+.+++.+ +..+| |+|++|+++...+..+++++ .++.+.+|..++.. ..+ ..+.+.
T Consensus 105 ~~~~~~~~~~~~~~~~~l-~~~~~--Dvv~~~~~~~~~~~~~~~~~---~p~v~~~h~~~~~~~~~~~------~~~~~~ 172 (416)
T 2x6q_A 105 EEMKELYLNVNRENSKFI-DLSSF--DYVLVHDPQPAALIEFYEKK---SPWLWRCHIDLSSPNREFW------EFLRRF 172 (416)
T ss_dssp HHHHHHHHHHHHHHHHSS-CGGGS--SEEEEESSTTGGGGGGSCCC---SCEEEECCSCCSSCCHHHH------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-hhcCC--CEEEEeccchhhHHHHHHhc---CCEEEEEccccCCccHHHH------HHHHHH
Confidence 344555655554444433 34456 99999999877766665433 78999999887642 111 112223
Q ss_pred hhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc
Q 002984 252 LLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF 331 (861)
Q Consensus 252 ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~ 331 (861)
+..+|.+-+.+.++.+..+ .. .++.++|+|||...+..... .......+++++
T Consensus 173 ~~~~~~~i~~~s~~~~~~~----------------------~~--~~~~vi~ngvd~~~~~~~~~---~~~~~~~~r~~~ 225 (416)
T 2x6q_A 173 VEKYDRYIFHLPEYVQPEL----------------------DR--NKAVIMPPSIDPLSEKNVEL---KQTEILRILERF 225 (416)
T ss_dssp HTTSSEEEESSGGGSCTTS----------------------CT--TTEEECCCCBCTTSTTTSCC---CHHHHHHHHHHT
T ss_pred HHhCCEEEEechHHHHhhC----------------------Cc--cceEEeCCCCChhhhccccc---ChhhHHHHHHHh
Confidence 3345655444443322210 00 23567999999876642211 122345566666
Q ss_pred ---CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 002984 332 ---DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN 408 (861)
Q Consensus 332 ---~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~ 408 (861)
.++++|+++||+++.||+..+++|+..+.+++|+++ |+++|..... .+ +..+.+++++++.+.
T Consensus 226 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~----l~i~G~g~~~-~~---~~~~~l~~~~~~~~~------ 291 (416)
T 2x6q_A 226 DVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQ----LLLVGVMAHD-DP---EGWIYFEKTLRKIGE------ 291 (416)
T ss_dssp TCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCE----EEEEECCCTT-CH---HHHHHHHHHHHHHTT------
T ss_pred CCCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEEecCccc-ch---hHHHHHHHHHHHhCC------
Confidence 467899999999999999999999999999999876 8888854311 12 233344455554432
Q ss_pred cccEEEEcC---CCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCc
Q 002984 409 YEPVVLIDR---PVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (861)
Q Consensus 409 ~~pvv~~~~---~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (861)
.+.+.+.| .++.+++..+|+.||++|+||..||||++++|||+| +.|+|+|+.+|..
T Consensus 292 -~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~-------------------G~PvI~~~~~g~~ 351 (416)
T 2x6q_A 292 -DYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWK-------------------GKPVIGRAVGGIK 351 (416)
T ss_dssp -CTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHT-------------------TCCEEEESCHHHH
T ss_pred -CCcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHc-------------------CCCEEEccCCCCh
Confidence 12334444 556889999999999999999999999999999999 5669999998888
Q ss_pred ccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhc-cCCHhHHHHHHHHHHHH
Q 002984 486 PSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWARSFAQDLER 546 (861)
Q Consensus 486 ~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~fl~~l~~ 546 (861)
+.+. .|++++ |++++|++|.++++ +++.++...++.++++. .+++..+++.+++-+++
T Consensus 352 e~i~~~~~g~l~~--d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 352 FQIVDGETGFLVR--DANEAVEVVLYLLK-HPEVSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp HHCCBTTTEEEES--SHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred hheecCCCeEEEC--CHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 8873 478886 99999999999998 45556666667777775 68999999888876654
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.3e-21 Score=216.67 Aligned_cols=284 Identities=13% Similarity=0.145 Sum_probs=199.5
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhc-C-CCeEEEEEecCCCChHHHhcCCchHHHH-HHhhcCCEEeecChHhHH
Q 002984 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRF-N-RIKLGFFLHSPFPSSEIYRTLPVRDEIL-RGLLNCDLIGFHTFDYAR 267 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~-~-~~~i~~flH~PfP~~e~f~~lp~r~~il-~~ll~~dligF~t~~~~~ 267 (861)
+++..+| |+|++|..+...++.++.++. . +.|+.+.+|...+ ..+..-+....+. ..+-.+|.|-..+....+
T Consensus 94 ~l~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~ 169 (394)
T 2jjm_A 94 VAQRENL--DILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLIN 169 (394)
T ss_dssp HHHHHTC--SEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHH
T ss_pred HHHHcCC--CEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHH
Confidence 3344577 899999876555555554433 2 6899999997421 1111122222233 334568999988876666
Q ss_pred HHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcc
Q 002984 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMD 344 (861)
Q Consensus 268 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld 344 (861)
.+.+ ..+. ..++.++|+|+|.+.|... . ...+++++ .++++|+++||+.
T Consensus 170 ~~~~----~~~~----------------~~~~~vi~ngv~~~~~~~~----~----~~~~~~~~~~~~~~~~i~~~G~~~ 221 (394)
T 2jjm_A 170 ETHE----LVKP----------------NKDIQTVYNFIDERVYFKR----D----MTQLKKEYGISESEKILIHISNFR 221 (394)
T ss_dssp HHHH----HTCC----------------SSCEEECCCCCCTTTCCCC----C----CHHHHHHTTCC---CEEEEECCCC
T ss_pred HHHH----hhCC----------------cccEEEecCCccHHhcCCc----c----hHHHHHHcCCCCCCeEEEEeeccc
Confidence 5543 1111 1246779999998877421 1 12344554 4578999999999
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHH
Q 002984 345 IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEK 424 (861)
Q Consensus 345 ~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el 424 (861)
+.||+..+++|++.+.++ +++ .|+++|. +++.+++++.+. + .+..+.+.+.+. .+++
T Consensus 222 ~~Kg~~~li~a~~~l~~~-~~~----~l~i~G~-----g~~~~~l~~~~~----~-------~~l~~~v~~~g~--~~~~ 278 (394)
T 2jjm_A 222 KVKRVQDVVQAFAKIVTE-VDA----KLLLVGD-----GPEFCTILQLVK----N-------LHIEDRVLFLGK--QDNV 278 (394)
T ss_dssp GGGTHHHHHHHHHHHHHS-SCC----EEEEECC-----CTTHHHHHHHHH----T-------TTCGGGBCCCBS--CSCT
T ss_pred cccCHHHHHHHHHHHHhh-CCC----EEEEECC-----chHHHHHHHHHH----H-------cCCCCeEEEeCc--hhhH
Confidence 999999999999999876 444 4787773 344444444333 2 222233445553 5789
Q ss_pred HHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHH
Q 002984 425 SAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDA 501 (861)
Q Consensus 425 ~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~ 501 (861)
..+|+.||++|+||..||||++++|||+| +.|+|+|..+|..+.+. .|++++|.|+++
T Consensus 279 ~~~~~~adv~v~ps~~e~~~~~~~EAma~-------------------G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~ 339 (394)
T 2jjm_A 279 AELLAMSDLMLLLSEKESFGLVLLEAMAC-------------------GVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTG 339 (394)
T ss_dssp HHHHHTCSEEEECCSCCSCCHHHHHHHHT-------------------TCCEEEECCTTSTTTCCBTTTEEEECTTCHHH
T ss_pred HHHHHhCCEEEeccccCCCchHHHHHHhc-------------------CCCEEEecCCChHHHhhcCCceEEeCCCCHHH
Confidence 99999999999999999999999999999 56699999999888883 489999999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHHHHHHHHHH
Q 002984 502 VADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLERACR 549 (861)
Q Consensus 502 ~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~~~ 549 (861)
+|++|.++++ +++.+....++.++++ ..+++..+++.+++-++++.+
T Consensus 340 la~~i~~l~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 340 VADQAIQLLK-DEELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp HHHHHHHHHH-CHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 9999999998 4555666677778888 779999999999888877543
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.86 E-value=8e-21 Score=219.71 Aligned_cols=295 Identities=17% Similarity=0.186 Sum_probs=205.1
Q ss_pred cCCCCCEEEEeCcccccHHHHHHhh-cCCCeEEEEEecCCCCh----HHHhc--CCc-------------hHHHHHHhhc
Q 002984 195 INPDDDCVWVHDYHLMVLPTFLRKR-FNRIKLGFFLHSPFPSS----EIYRT--LPV-------------RDEILRGLLN 254 (861)
Q Consensus 195 ~~p~~D~VwvhDyhl~llp~~lr~~-~~~~~i~~flH~PfP~~----e~f~~--lp~-------------r~~il~~ll~ 254 (861)
.+| |+|++|+++..+++.++++. ..++++.+.+|..++.. ..+.. +|. +.-.-..+..
T Consensus 129 ~~~--DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (485)
T 1rzu_A 129 WRP--DMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQT 206 (485)
T ss_dssp CCC--SEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHH
T ss_pred CCC--CEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhh
Confidence 355 99999999888888888764 36789999999876431 11111 110 1122334456
Q ss_pred CCEEeecChHhHHHHHHH-H----HHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCC-----------c
Q 002984 255 CDLIGFHTFDYARHFLSC-C----SRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNL-----------P 318 (861)
Q Consensus 255 ~dligF~t~~~~~~Fl~~-~----~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~-----------~ 318 (861)
+|.|-..+....+.+.+. . ..+++. ...++.++|+|||.+.|...... +
T Consensus 207 ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~---------------~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~ 271 (485)
T 1rzu_A 207 ATALSTVSPSYAEEILTAEFGMGLEGVIGS---------------RAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLK 271 (485)
T ss_dssp CSEEEESCHHHHHHTTSHHHHTTCHHHHHT---------------TGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCT
T ss_pred cCEEEecCHhHHHHHhccccCcchHHHHHh---------------hcCCceEEcCCCcccccCCcccccccccccccchh
Confidence 899988887766655431 0 000111 01246679999999887532110 0
Q ss_pred hhHHHHHHHHHHc---C-CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHH
Q 002984 319 ATATKIKEIEKQF---D-GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETY 394 (861)
Q Consensus 319 ~~~~~~~~l~~~~---~-~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~ 394 (861)
........+++++ . ++++|++|||+++.||+..+++|+..+.+ ++ +.|+++|. ++ .+++++++
T Consensus 272 ~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~-----g~--~~~~~~l~ 338 (485)
T 1rzu_A 272 NRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LG----GRLVVLGA-----GD--VALEGALL 338 (485)
T ss_dssp THHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TT----CEEEEEEC-----BC--HHHHHHHH
T ss_pred hHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cC----ceEEEEeC-----Cc--hHHHHHHH
Confidence 0112234566665 2 26799999999999999999999999876 34 44888884 22 23445555
Q ss_pred HHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCc
Q 002984 395 LTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTS 474 (861)
Q Consensus 395 ~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g 474 (861)
+++.+. + ..|+++.+. +.+++..+|+.||++|+||..||||++++|||+| |.
T Consensus 339 ~~~~~~----~----~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~-------------------G~ 390 (485)
T 1rzu_A 339 AAASRH----H----GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRY-------------------GC 390 (485)
T ss_dssp HHHHHT----T----TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH-------------------TC
T ss_pred HHHHhC----C----CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHC-------------------CC
Confidence 665543 1 246667776 8888899999999999999999999999999999 56
Q ss_pred eEEeccCCCCcccCC------------CceEeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHhhhhhccCCHhHHHHHH
Q 002984 475 MLVVSEFIGCSPSLS------------GAIRVNPWDIDAVADAMTLAIN--MRDSEKQLRHEKHYRYVSTHDVAYWARSF 540 (861)
Q Consensus 475 ~lV~Se~~G~~~~l~------------~ai~vnP~d~~~~A~ai~~aL~--m~~~e~~~r~~~~~~~v~~~~~~~W~~~f 540 (861)
|+|+|..+|..+.+. .|++++|.|++++|++|.+++. ..++.+....++.++ ..+++...++++
T Consensus 391 PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~ 468 (485)
T 1rzu_A 391 IPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLY 468 (485)
T ss_dssp EEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHH
T ss_pred CEEEeCCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHH
Confidence 799999999888883 4799999999999999999994 245555544444443 678999999988
Q ss_pred HHHHHHHHH
Q 002984 541 AQDLERACR 549 (861)
Q Consensus 541 l~~l~~~~~ 549 (861)
++-.+++.+
T Consensus 469 ~~~y~~~~~ 477 (485)
T 1rzu_A 469 AALYSQLIS 477 (485)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhhC
Confidence 877776543
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-21 Score=206.09 Aligned_cols=207 Identities=18% Similarity=0.103 Sum_probs=131.9
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCC--
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNK-- 666 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~-- 666 (861)
|+|+|+||+||||+ . ++.++ +++++|+++ +++|+.|+|+|||+...+..++..+. ..++|++||+.+...+
T Consensus 1 Mikli~~DlDGTLl-~---~~~~~-~~~~~l~~l-~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~ 74 (249)
T 2zos_A 1 MIRLIFLDIDKTLI-P---GYEPD-PAKPIIEEL-KDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGY 74 (249)
T ss_dssp CEEEEEECCSTTTC-T---TSCSG-GGHHHHHHH-HHTTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTC
T ss_pred CccEEEEeCCCCcc-C---CCCcH-HHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCc
Confidence 46999999999999 3 34454 499999999 68999999999999999999887654 3479999999998763
Q ss_pred ------------cceEEecCCccChHHHHHHHHHHHHHhhcCCCceEee--------ccceeEee------eccCCccch
Q 002984 667 ------------TSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEI--------KESALVWH------HQDADPDFG 720 (861)
Q Consensus 667 ------------~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~--------k~~~l~~~------~~~~d~~~~ 720 (861)
...+...++. +.+..+++.+.+.. +..... +...+.+. .+.....+.
T Consensus 75 ~~~~~~~~~~~~~~i~~~~l~~------~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (249)
T 2zos_A 75 FPFDVKGKEVGNYIVIELGIRV------EKIREELKKLENIY-GLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIF 147 (249)
T ss_dssp CC------CCCCCCEEECSCCH------HHHHHHHHHHHHHH-TCEEGGGSCHHHHHHHHCCCTTTHHHHHCCSSCEEEE
T ss_pred ccccccccccCceEEEecCCCH------HHHHHHHHHHHhhc-CEEEecCCCHHHHHHHhCCChhHhhhhhhhhhcCceE
Confidence 3334433331 22223332221110 000000 00000000 000000000
Q ss_pred hccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCC-CCCeEEEEeCCcchHHHHHHccccC
Q 002984 721 SCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGR-PPDFVMCVGDDRSDEDMFESILSTV 799 (861)
Q Consensus 721 ~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi-~~d~vlaiGD~~ND~~Mf~~ag~~~ 799 (861)
.....+..+.+.+ ..+.+..+..++||.| ++|||.|++++++++ |+ +++++++|||+.||++||+.+|.
T Consensus 148 ~~~~~~~~~~l~~----~~~~~~~s~~~~ei~~-g~sKg~al~~l~~~~---~~~~~~~viafGD~~NDi~Ml~~ag~-- 217 (249)
T 2zos_A 148 EWSRDGWEEVLVE----GGFKVTMGSRFYTVHG-NSDKGKAAKILLDFY---KRLGQIESYAVGDSYNDFPMFEVVDK-- 217 (249)
T ss_dssp ECSSSCHHHHHHH----TTCEEEECSSSEEEEC-SCCHHHHHHHHHHHH---HTTSCEEEEEEECSGGGHHHHTTSSE--
T ss_pred ecCCHHHHHHHHh----CCEEEEecCCeEEEeC-CCChHHHHHHHHHHh---ccCCCceEEEECCCcccHHHHHhCCc--
Confidence 0000011233332 2344555567899999 999999999999999 88 89999999999999999999985
Q ss_pred CCCCCCCCCceEEEEeCCCC-----cccceecCCHhH
Q 002984 800 SGPSLPVPPEIFACTVGRKP-----SKAKYYLDDATD 831 (861)
Q Consensus 800 ~~~~~~~~~~~~av~vG~~~-----s~Aky~l~d~~e 831 (861)
+|+||++. ..|+|+++++++
T Consensus 218 ------------~va~gna~~~~~~~~a~~v~~~~~~ 242 (249)
T 2zos_A 218 ------------VFIVGSLKHKKAQNVSSIIDVLEVI 242 (249)
T ss_dssp ------------EEEESSCCCTTEEEESSHHHHHHHH
T ss_pred ------------EEEeCCCCccccchhceEEeccccc
Confidence 78898864 245666554443
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.1e-21 Score=215.94 Aligned_cols=280 Identities=13% Similarity=0.071 Sum_probs=210.9
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHH
Q 002984 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFL 270 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl 270 (861)
+++..+| |+|++|.+....+..++.+. .+.++.+.+|..+|....++.+-..-+ ..+-.+|.+-+.+....+.+.
T Consensus 102 ~l~~~~~--Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~~ 176 (406)
T 2gek_A 102 WIAEGDF--DVLHIHEPNAPSLSMLALQA-AEGPIVATFHTSTTKSLTLSVFQGILR--PYHEKIIGRIAVSDLARRWQM 176 (406)
T ss_dssp HHHHHCC--SEEEEECCCSSSHHHHHHHH-EESSEEEEECCCCCSHHHHHHHHSTTH--HHHTTCSEEEESSHHHHHHHH
T ss_pred HHHhcCC--CEEEECCccchHHHHHHHHh-cCCCEEEEEcCcchhhhhHHHHHHHHH--HHHhhCCEEEECCHHHHHHHH
Confidence 3444577 89999999988775555444 368999999999887654332211111 445679999998876666555
Q ss_pred HHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCc-ccccCH
Q 002984 271 SCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDM-DIFKGI 349 (861)
Q Consensus 271 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrl-d~~KGi 349 (861)
+. ++ .. ++ ++|+|+|.+.|....... . .-+++++|+++||+ .+.||+
T Consensus 177 ~~----~~---------------~~--~~-vi~~~v~~~~~~~~~~~~-------~---~~~~~~~i~~~G~~~~~~Kg~ 224 (406)
T 2gek_A 177 EA----LG---------------SD--AV-EIPNGVDVASFADAPLLD-------G---YPREGRTVLFLGRYDEPRKGM 224 (406)
T ss_dssp HH----HS---------------SC--EE-ECCCCBCHHHHHTCCCCT-------T---CSCSSCEEEEESCTTSGGGCH
T ss_pred Hh----cC---------------CC--cE-EecCCCChhhcCCCchhh-------h---ccCCCeEEEEEeeeCccccCH
Confidence 41 11 11 46 799999998886432110 0 01256899999999 999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002984 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (861)
Q Consensus 350 ~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 429 (861)
..+++|+..+.+++|+++ |+.+|. ++. +++++.+.++ .+.+.+.|.++.+|+..+|+
T Consensus 225 ~~li~a~~~l~~~~~~~~----l~i~G~-----~~~-~~l~~~~~~~-------------~~~v~~~g~~~~~~~~~~~~ 281 (406)
T 2gek_A 225 AVLLAALPKLVARFPDVE----ILIVGR-----GDE-DELREQAGDL-------------AGHLRFLGQVDDATKASAMR 281 (406)
T ss_dssp HHHHHHHHHHHTTSTTCE----EEEESC-----SCH-HHHHHHTGGG-------------GGGEEECCSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeE----EEEEcC-----CcH-HHHHHHHHhc-------------cCcEEEEecCCHHHHHHHHH
Confidence 999999999999888776 887773 333 4444433221 24566788999999999999
Q ss_pred hcccceeccc-ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHH
Q 002984 430 VAECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (861)
Q Consensus 430 ~ADv~vvtS~-~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~a 505 (861)
.||++|+||. .||||++++|||+| |.|+|+|..+|..+.+. .|++++|.|+++++++
T Consensus 282 ~adv~v~ps~~~e~~~~~~~Ea~a~-------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~ 342 (406)
T 2gek_A 282 SADVYCAPHLGGESFGIVLVEAMAA-------------------GTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAA 342 (406)
T ss_dssp HSSEEEECCCSCCSSCHHHHHHHHH-------------------TCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHH
T ss_pred HCCEEEecCCCCCCCchHHHHHHHc-------------------CCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHH
Confidence 9999999997 99999999999999 56799999988887774 4899999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHHHHh
Q 002984 506 MTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRD 550 (861)
Q Consensus 506 i~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~ 550 (861)
|.++++ .++.+....++.++++..+++...++.+++-+++..+.
T Consensus 343 i~~l~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 386 (406)
T 2gek_A 343 LIGILE-DDQLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGA 386 (406)
T ss_dssp HHHHHH-CHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 999998 45556666677788888899999999998888876544
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.6e-21 Score=234.64 Aligned_cols=309 Identities=13% Similarity=0.105 Sum_probs=207.8
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHH-------------HHHhhcCCEEeecChHhH
Q 002984 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEI-------------LRGLLNCDLIGFHTFDYA 266 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~i-------------l~~ll~~dligF~t~~~~ 266 (861)
|+|+.|++...+++.++.++. ++++.+..|...+..-....+.|+ .+ ...+-.||.|-..|...+
T Consensus 409 DVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~~-~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~ 486 (816)
T 3s28_A 409 DLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWK-KLDDKYHFSCQFTADIFAMNHTDFIITSTFQEI 486 (816)
T ss_dssp SEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTHH-HHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHH
T ss_pred eEEEeCCchHHHHHHHHHHHc-CCCEEEEEecccccccccccchhh-hHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHH
Confidence 999999766666666665554 689999999754221111111111 11 114567888888887655
Q ss_pred HHHHHHHHHHhCCccccCC-----C-e---eeEEecCeEEEEEEecccCCchHHHHhhCCch----hHHHHHHH------
Q 002984 267 RHFLSCCSRMLGLDYESKR-----G-H---IGLDYFGRTVYIKILPVGVHMGRLESVLNLPA----TATKIKEI------ 327 (861)
Q Consensus 267 ~~Fl~~~~r~lg~~~~~~~-----~-~---~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~----~~~~~~~l------ 327 (861)
+.....+ + .+.... + + -++..... ++.++|+|||.+.|.+...... .......+
T Consensus 487 ~~l~~~~----~-~y~~~~~~~~p~Lyr~~~gI~~~~~--ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~ 559 (816)
T 3s28_A 487 AGSKETV----G-QYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVE 559 (816)
T ss_dssp HCCSSSC----C-TTGGGSSEEETTTEEEEESCCTTCT--TEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCC
T ss_pred HHHHHHH----H-HhhhhhccccchhhhcccccccCCC--CEEEECCCcCHHHcCccchhhhhhhhccccccccccchhh
Confidence 5321100 0 011100 0 0 00111112 6789999999998864332111 11111111
Q ss_pred -HHH-----cCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC--CCChhHHHHHHHHHHHHHHH
Q 002984 328 -EKQ-----FDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPA--RGSGKDVQEAKKETYLTAKR 399 (861)
Q Consensus 328 -~~~-----~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~--r~~~~~~~~~~~~v~~l~~~ 399 (861)
++. ..++++|++|||+++.||+..+++|+.++.+.+|+++ |+++|.+. ....++..+..+++.+++++
T Consensus 560 ~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~----LvIvG~g~~~~~~~~e~~~~~~~L~~li~~ 635 (816)
T 3s28_A 560 NKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELAN----LVVVGGDRRKESKDNEEKAEMKKMYDLIEE 635 (816)
T ss_dssp BTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCE----EEEECCCTTSCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeE----EEEEeCCCcccccchhhHHHHHHHHHHHHH
Confidence 111 2467899999999999999999999999988887765 88888654 22233344556666666665
Q ss_pred HhhccCCCCcccEEEEcC----CCCHHHHHHHHH-hcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCc
Q 002984 400 INEVYGSPNYEPVVLIDR----PVPRFEKSAYYA-VAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTS 474 (861)
Q Consensus 400 IN~~~~~~~~~pvv~~~~----~v~~~el~aly~-~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g 474 (861)
. +..+.+.|.| .++.+|+..+|+ +||+||+||..||||++++||||| |.
T Consensus 636 l-------gL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~-------------------G~ 689 (816)
T 3s28_A 636 Y-------KLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC-------------------GL 689 (816)
T ss_dssp T-------TCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHT-------------------TC
T ss_pred c-------CCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHc-------------------CC
Confidence 4 2334556666 445689999998 689999999999999999999999 56
Q ss_pred eEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHhc---CCHHHHHHHHHHhhhhh-ccCCHhHHHHHHHHHHHHH
Q 002984 475 MLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAIN---MRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLERA 547 (861)
Q Consensus 475 ~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~---m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 547 (861)
|+|+|..+|..+.+. .|++|+|.|++++|++|.++++ .+++.+....++.++++ ..+++..+++++++-..+.
T Consensus 690 PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 690 PTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp CEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred CEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 799999999998882 4899999999999999988872 24556666777788888 7799999999998876654
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.4e-21 Score=203.85 Aligned_cols=219 Identities=14% Similarity=0.108 Sum_probs=141.7
Q ss_pred EEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcc----
Q 002984 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTS---- 668 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~---- 668 (861)
+|+|||||||++ +. .+++.++++|+++ +++|+.|+++|||+...+. .++ + ..+++++||+.+...+..
T Consensus 2 li~~DlDGTLl~---~~-~i~~~~~~al~~l-~~~Gi~v~iaTGR~~~~~~-~l~-~-~~~~i~~nGa~i~~~~~~~~~~ 73 (259)
T 3zx4_A 2 IVFTDLDGTLLD---ER-GELGPAREALERL-RALGVPVVPVTAKTRKEVE-ALG-L-EPPFIVENGGGLYLPRDWPVRA 73 (259)
T ss_dssp EEEECCCCCCSC---SS-SSCSTTHHHHHHH-HHTTCCEEEBCSSCHHHHH-HTT-C-CSSEEEGGGTEEEEETTCSSCC
T ss_pred EEEEeCCCCCcC---CC-cCCHHHHHHHHHH-HHCCCeEEEEeCCCHHHHH-HcC-C-CCcEEEECCcEEEeCCCCcccc
Confidence 799999999999 67 8999999999999 6899999999999999998 332 1 356899999999877653
Q ss_pred --------eEEecCCccChHHHHHHHHHHHHHhhcCCCceEee--cc----ceeEee------eccCCccc--hhccHHH
Q 002984 669 --------EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEI--KE----SALVWH------HQDADPDF--GSCQAKE 726 (861)
Q Consensus 669 --------~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~--k~----~~l~~~------~~~~d~~~--~~~~a~e 726 (861)
.+....+ ...+.+.+..+.+.|..... .+... .. ..+... .+.....+ ......+
T Consensus 74 ~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (259)
T 3zx4_A 74 GRPKGGYRVVSLAWP--YRKVRARLREAEALAGRPIL-GYGDLTAEAVARLTGLSREAARRAKAREYDETLVLCPEEVEA 150 (259)
T ss_dssp SEEETTEEEEECSCC--HHHHHHHHHHHHHHHTSCCC-BGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEEBCCCTTTHHH
T ss_pred cccCCceEEEEcCCC--HHHHHHHHHHHHHhcCceEE-EcCCCCHHHHHHHcCCCHHHhhhhhccccceeEEeCcHHHHH
Confidence 2222221 11233333322222211000 00000 00 000000 00000000 0001233
Q ss_pred HHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCC--CeEEEEeCCcchHHHHHHccccCCCCCC
Q 002984 727 LLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPP--DFVMCVGDDRSDEDMFESILSTVSGPSL 804 (861)
Q Consensus 727 l~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~--d~vlaiGD~~ND~~Mf~~ag~~~~~~~~ 804 (861)
+.+.+. ...+.+..+..++|+.|+ ++|+.+++++++++ |+++ +++++|||+.||++||+.+|.
T Consensus 151 ~~~~l~----~~~~~~~~s~~~~ei~~~-~~K~~~l~~l~~~~---~i~~~~~~~~~~GD~~nD~~m~~~ag~------- 215 (259)
T 3zx4_A 151 VLEALE----AVGLEWTHGGRFYHAAKG-ADKGRAVARLRALW---PDPEEARFAVGLGDSLNDLPLFRAVDL------- 215 (259)
T ss_dssp HHHHHH----HTTCEEEECSSSEEEESS-CCHHHHHHHHHHTC---SSHHHHTSEEEEESSGGGHHHHHTSSE-------
T ss_pred HHHHHH----HCCcEEEecCceEEEcCC-CCHHHHHHHHHHHh---CCCCCCceEEEEeCCHHHHHHHHhCCC-------
Confidence 333333 224455555567799999 99999999999999 9998 999999999999999999986
Q ss_pred CCCCceEEEEeCCCC-cccceecC--CHhHHHHHHHHHHhhcC
Q 002984 805 PVPPEIFACTVGRKP-SKAKYYLD--DATDVLKLLQGLATASS 844 (861)
Q Consensus 805 ~~~~~~~av~vG~~~-s~Aky~l~--d~~eV~~~L~~L~~~~~ 844 (861)
+|+|||+. -.|.|++. +.++|.++|+.+.....
T Consensus 216 -------~va~~na~~~~~~~~~~~~~~~gv~~~~~~~~~~~~ 251 (259)
T 3zx4_A 216 -------AVYVGRGDPPEGVLATPAPGPEGFRYAVERYLLPRL 251 (259)
T ss_dssp -------EEECSSSCCCTTCEECSSCHHHHHHHHHHHHTTTC-
T ss_pred -------eEEeCChhhcCCcEEeCCCCchHHHHHHHHHHHhCc
Confidence 78888753 34456654 46889999999876543
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-19 Score=208.78 Aligned_cols=355 Identities=14% Similarity=0.112 Sum_probs=216.4
Q ss_pred ccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEe
Q 002984 151 KQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLH 230 (861)
Q Consensus 151 ~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH 230 (861)
+.-||-.|+--. |.+...++ .-..|--+-+.|-+.+...-....|++++||+|-.++|.+||++.++++..|..|
T Consensus 139 ~~~lw~~~~i~s---~~~yg~~d--d~~~F~y~~~avl~~l~~~~~~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH 213 (725)
T 3nb0_A 139 KGDLWSLVGIPS---PENDFETN--DAILLGYTVAWFLGEVAHLDSQHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTH 213 (725)
T ss_dssp HHHHHHHHCCCC---CSSCHHHH--HHHHHHHHHHHHHHHHHHHCCSEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEES
T ss_pred HHHHHHHhCcCC---CCcccchh--HHHHHHHHHHHHHHHHHhcCCCCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEe
Confidence 455888877543 21111111 2223333334444443221111128999999999999999999999999999999
Q ss_pred cC----C----CChHHHhcCC--------------chHH-HHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCe
Q 002984 231 SP----F----PSSEIYRTLP--------------VRDE-ILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGH 287 (861)
Q Consensus 231 ~P----f----P~~e~f~~lp--------------~r~~-il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~ 287 (861)
-- + =..+.|..+. ..-. .-.++..||.|-.-+..|++.-.. +++..
T Consensus 214 ~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~~----Ll~r~------- 282 (725)
T 3nb0_A 214 ATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHSADVFTTVSQITAFEAEH----LLKRK------- 282 (725)
T ss_dssp SCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHHHSSEEEESSHHHHHHHHH----HTSSC-------
T ss_pred cchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHHhCCEEEECCHHHHHHHHH----HhcCC-------
Confidence 64 0 0111222121 1112 233446778888777777664432 43321
Q ss_pred eeEEecCeEEEEEEecccCCchHHHHhhCC----chhHHHH-HHHHHHcC-------CCeEEEe-ecCcc-cccCHHHHH
Q 002984 288 IGLDYFGRTVYIKILPVGVHMGRLESVLNL----PATATKI-KEIEKQFD-------GKKLILG-IDDMD-IFKGISLKL 353 (861)
Q Consensus 288 ~~~~~~gr~~~i~v~p~GId~~~~~~~~~~----~~~~~~~-~~l~~~~~-------~~~vil~-Vdrld-~~KGi~~~l 353 (861)
...| +|+|||.+.|.+.... .....++ +.+++.+. +++++++ ++|++ ..||++.++
T Consensus 283 --------~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~i 352 (725)
T 3nb0_A 283 --------PDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFI 352 (725)
T ss_dssp --------CSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHH
T ss_pred --------CCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHH
Confidence 1122 8999999887532000 0111111 12233221 4666666 79999 579999999
Q ss_pred HHHHHHHHhC--CCCCCcEEEEEEecCCCCChhHH-----HHHHHHHHHHHHHHh-------------------------
Q 002984 354 LAMEQLLQQH--PGMRGKVVLVQIVNPARGSGKDV-----QEAKKETYLTAKRIN------------------------- 401 (861)
Q Consensus 354 ~Af~~ll~~~--P~~~~~vvLvqi~~p~r~~~~~~-----~~~~~~v~~l~~~IN------------------------- 401 (861)
+|+.++...- .... +-|+..|-.|+...+... +.+.+++.+.+..|.
T Consensus 353 eAl~~L~~~l~~~~~~-~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 431 (725)
T 3nb0_A 353 EALARLNYRLKVSGSK-KTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPT 431 (725)
T ss_dssp HHHHHHHHHHHHTTCC-CEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCC
T ss_pred HHHHHHHHHHhhccCC-CcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCC
Confidence 9999987541 1222 223333444554433211 111112222111111
Q ss_pred ---------------------hcc-------------------------------CCCCcccEEEEcCCCCHH------H
Q 002984 402 ---------------------EVY-------------------------------GSPNYEPVVLIDRPVPRF------E 423 (861)
Q Consensus 402 ---------------------~~~-------------------------------~~~~~~pvv~~~~~v~~~------e 423 (861)
.++ ...+-..|+++.+.++.. +
T Consensus 432 ~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d 511 (725)
T 3nb0_A 432 DLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLD 511 (725)
T ss_dssp CHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCC
T ss_pred CHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhH
Confidence 001 012334577888888776 5
Q ss_pred HHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC----------CceE
Q 002984 424 KSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS----------GAIR 493 (861)
Q Consensus 424 l~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~----------~ai~ 493 (861)
+..+|+.||+||+||.+||||++++||||| |.|+|+|..+|+.+.+. .|++
T Consensus 512 ~~~~~~~advfV~PS~~EgfGl~~LEAmA~-------------------G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~l 572 (725)
T 3nb0_A 512 YDEFVRGCHLGVFPSYYEPWGYTPAECTVM-------------------GVPSITTNVSGFGSYMEDLIETNQAKDYGIY 572 (725)
T ss_dssp HHHHHHHCSEEECCCSSBSSCHHHHHHHHT-------------------TCCEEEETTBHHHHHHHTTSCHHHHHHTTEE
T ss_pred HHHHHhhceEEEeccccCCCCHHHHHHHHc-------------------CCCEEEeCCCChhhhhhccccccCCCCceEE
Confidence 899999999999999999999999999999 56799999999987662 3788
Q ss_pred e---CCCCHHHHHHHHHHHh----cCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHHHHhh
Q 002984 494 V---NPWDIDAVADAMTLAI----NMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDH 551 (861)
Q Consensus 494 v---nP~d~~~~A~ai~~aL----~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~ 551 (861)
| +|.|+++++++|.++| .+++.++..+.++.++....+++.+-++.+++..+++....
T Consensus 573 V~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL~~~ 637 (725)
T 3nb0_A 573 IVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQLALRRG 637 (725)
T ss_dssp EECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 8 4567777777766666 46777766666666677778999999999988887776543
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.79 E-value=3.9e-19 Score=180.26 Aligned_cols=188 Identities=18% Similarity=0.191 Sum_probs=144.8
Q ss_pred ecccCCchHHH--HhhCCchhHHHHHHHHHHc--CCCeEEEeecCcc-cccCHHHHHHHHHHHH--HhCCCCCCcEEEEE
Q 002984 302 LPVGVHMGRLE--SVLNLPATATKIKEIEKQF--DGKKLILGIDDMD-IFKGISLKLLAMEQLL--QQHPGMRGKVVLVQ 374 (861)
Q Consensus 302 ~p~GId~~~~~--~~~~~~~~~~~~~~l~~~~--~~~~vil~Vdrld-~~KGi~~~l~Af~~ll--~~~P~~~~~vvLvq 374 (861)
+|+|||.+.|. +. .....+....+++++ .++++|+++||+. +.||+..+++|+..+. +++|+++ |+.
T Consensus 2 ipngvd~~~f~~~~~--~~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~----l~i 75 (200)
T 2bfw_A 2 SHNGIDCSFWNESYL--TGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FII 75 (200)
T ss_dssp ---CCCTTTSSGGGS--CSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEE----EEE
T ss_pred CCCccChhhcccccc--ccchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeE----EEE
Confidence 58999999886 32 111223345677776 4677999999999 9999999999999997 7777655 888
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeee
Q 002984 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (861)
Q Consensus 375 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~ 454 (861)
+|. ++ .+...++.+++.+.+ .|+++.+.++.+++..+|+.||++|+||..||||++++|||+|
T Consensus 76 ~G~-----~~--~~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~- 138 (200)
T 2bfw_A 76 IGK-----GD--PELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL- 138 (200)
T ss_dssp ECC-----BC--HHHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT-
T ss_pred ECC-----CC--hHHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHC-
Confidence 874 22 123344444444432 3444388999999999999999999999999999999999999
Q ss_pred cCCCcccccccCCCCCCCCceEEeccCCCCcccC--CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhcc
Q 002984 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL--SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (861)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~ 530 (861)
+.|+|+|..+|..+.+ ..+++++|.|+++++++|.++++|.+++++.+.++.++++.+
T Consensus 139 ------------------G~PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 139 ------------------GAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS 198 (200)
T ss_dssp ------------------TCEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------CCCEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 5679999998888887 348999999999999999999998877777777777766543
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-19 Score=198.72 Aligned_cols=245 Identities=12% Similarity=-0.011 Sum_probs=180.9
Q ss_pred HHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHH
Q 002984 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHF 269 (861)
Q Consensus 190 ~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~F 269 (861)
++++..+| |+|++|.++..++. .+..+.+ .+.+|..++... .+|.|-+.+....+.+
T Consensus 78 ~~l~~~~~--Dvi~~~~~~~~~~~----~~~~~~p-v~~~h~~~~~~~----------------~~d~ii~~S~~~~~~~ 134 (342)
T 2iuy_A 78 RWLRTADV--DVVHDHSGGVIGPA----GLPPGTA-FISSHHFTTRPV----------------NPVGCTYSSRAQRAHC 134 (342)
T ss_dssp HHHHHCCC--SEEEECSSSSSCST----TCCTTCE-EEEEECSSSBCS----------------CCTTEEESCHHHHHHT
T ss_pred HHHHhcCC--CEEEECCchhhHHH----HhhcCCC-EEEecCCCCCcc----------------cceEEEEcCHHHHHHH
Confidence 34455576 89999998865443 3445788 999999886431 1888887776554433
Q ss_pred HHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCH
Q 002984 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGI 349 (861)
Q Consensus 270 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 349 (861)
.+ ..++.++|+|||.+.|..... ...++++|+++||+.+.||+
T Consensus 135 ~~------------------------~~~~~vi~ngvd~~~~~~~~~-------------~~~~~~~i~~vG~~~~~Kg~ 177 (342)
T 2iuy_A 135 GG------------------------GDDAPVIPIPVDPARYRSAAD-------------QVAKEDFLLFMGRVSPHKGA 177 (342)
T ss_dssp TC------------------------CTTSCBCCCCBCGGGSCCSTT-------------CCCCCSCEEEESCCCGGGTH
T ss_pred hc------------------------CCceEEEcCCCChhhcCcccc-------------cCCCCCEEEEEeccccccCH
Confidence 21 013456899999987742211 12456789999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002984 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (861)
Q Consensus 350 ~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 429 (861)
..+++|++.+ +++ |+.+|. ++..+.++ +++++.+ +.+.+.|.++.+|+..+|+
T Consensus 178 ~~li~a~~~~-----~~~----l~i~G~-----g~~~~~l~----~~~~~~~---------~~v~~~g~~~~~~l~~~~~ 230 (342)
T 2iuy_A 178 LEAAAFAHAC-----GRR----LVLAGP-----AWEPEYFD----EITRRYG---------STVEPIGEVGGERRLDLLA 230 (342)
T ss_dssp HHHHHHHHHH-----TCC----EEEESC-----CCCHHHHH----HHHHHHT---------TTEEECCCCCHHHHHHHHH
T ss_pred HHHHHHHHhc-----CcE----EEEEeC-----cccHHHHH----HHHHHhC---------CCEEEeccCCHHHHHHHHH
Confidence 9999999886 444 887874 23333333 3444432 2356788999999999999
Q ss_pred hcccceeccc----------ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC-----CceEe
Q 002984 430 VAECCIVNAV----------RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-----GAIRV 494 (861)
Q Consensus 430 ~ADv~vvtS~----------~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-----~ai~v 494 (861)
.||++|+||. .||||++++|||+| +.|+|+|..+|..+.+. .|+++
T Consensus 231 ~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~-------------------G~PvI~s~~~~~~e~~~~~~~~~g~~~ 291 (342)
T 2iuy_A 231 SAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVS-------------------GTPVVGTGNGCLAEIVPSVGEVVGYGT 291 (342)
T ss_dssp HCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHT-------------------TCCEEECCTTTHHHHGGGGEEECCSSS
T ss_pred hCCEEEECCcccccccccccccCccHHHHHHHhc-------------------CCCEEEcCCCChHHHhcccCCCceEEc
Confidence 9999999999 89999999999999 56699999988888873 38999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHHHHHHHHHHh
Q 002984 495 NPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLERACRD 550 (861)
Q Consensus 495 nP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~~~~ 550 (861)
+| |++++|++|.++++ .++.++++ ..+++...++++++-++++.+.
T Consensus 292 ~~-d~~~l~~~i~~l~~---------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 338 (342)
T 2iuy_A 292 DF-APDEARRTLAGLPA---------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAG 338 (342)
T ss_dssp CC-CHHHHHHHHHTSCC---------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTT
T ss_pred CC-CHHHHHHHHHHHHH---------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHcc
Confidence 99 99999999999987 22334444 5678899999988888776543
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=7.6e-20 Score=203.22 Aligned_cols=227 Identities=14% Similarity=0.145 Sum_probs=171.2
Q ss_pred cCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc--
Q 002984 254 NCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-- 331 (861)
Q Consensus 254 ~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-- 331 (861)
.+|.|-+.+....+.|.+. +|+. ..++.++|+|+|.+.|...... .....+++++
T Consensus 136 ~~d~ii~~s~~~~~~~~~~----~~~~---------------~~~~~vi~ngv~~~~~~~~~~~----~~~~~~~~~~~~ 192 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQKH----YQTE---------------PERFQILPPGIYPDRKYSEQIP----NSREIYRQKNGI 192 (374)
T ss_dssp CCCEEEESCHHHHHHHHHH----HCCC---------------GGGEEECCCCCCGGGSGGGSCT----THHHHHHHHTTC
T ss_pred CCcEEEEcCHHHHHHHHHH----hCCC---------------hhheEEecCCcCHHhcCcccch----hHHHHHHHHhCC
Confidence 5899988888777666542 2321 1245678999999888643221 1224556665
Q ss_pred -CCCeEEEeecCcccccCHHHHHHHHHHHHHh-CCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCc
Q 002984 332 -DGKKLILGIDDMDIFKGISLKLLAMEQLLQQ-HPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409 (861)
Q Consensus 332 -~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~-~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~ 409 (861)
.++++|+++||+.+.||+..+++|++.+.++ +|++ .|+.+|... . +++++ ++++. +.
T Consensus 193 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~----~l~i~G~g~-----~-~~~~~----~~~~~-------~~ 251 (374)
T 2iw1_A 193 KEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LLFVVGQDK-----P-RKFEA----LAEKL-------GV 251 (374)
T ss_dssp CTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EEEEESSSC-----C-HHHHH----HHHHH-------TC
T ss_pred CCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCce----EEEEEcCCC-----H-HHHHH----HHHHc-------CC
Confidence 4678999999999999999999999988766 4654 488888532 1 23333 33332 12
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-
Q 002984 410 EPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL- 488 (861)
Q Consensus 410 ~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 488 (861)
.+.+.+.+. .+++..+|+.||++|+||..||||++++|||+| +.|+|+|..+|..+.+
T Consensus 252 ~~~v~~~g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~e~i~ 310 (374)
T 2iw1_A 252 RSNVHFFSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITA-------------------GLPVLTTAVCGYAHYIA 310 (374)
T ss_dssp GGGEEEESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHH-------------------TCCEEEETTSTTTHHHH
T ss_pred CCcEEECCC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHC-------------------CCCEEEecCCCchhhhc
Confidence 233455554 578999999999999999999999999999999 5669999999988887
Q ss_pred --CCceEeC-CCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHH
Q 002984 489 --SGAIRVN-PWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546 (861)
Q Consensus 489 --~~ai~vn-P~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 546 (861)
..|++++ |.|+++++++|.++++ +++.++...++.++++.++++..|++.+.+-++.
T Consensus 311 ~~~~g~~~~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 311 DANCGTVIAEPFSQEQLNEVLRKALT-QSPLRMAWAENARHYADTQDLYSLPEKAADIITG 370 (374)
T ss_dssp HHTCEEEECSSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHC
T ss_pred cCCceEEeCCCCCHHHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3589997 9999999999999998 5566667777888888889999999988776653
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-17 Score=180.63 Aligned_cols=226 Identities=15% Similarity=0.154 Sum_probs=152.5
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHH-------hhcCCCCeEEEECCCChhhHHHHhccccC----CceEec
Q 002984 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKT-------LCSDPNNTVFIVSGRGRSSLSEWLAPCEM----LGIAAE 657 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~-------L~~~~g~~v~I~TGR~~~~l~~~~~~~~~----lgliae 657 (861)
.++|+|+|||||||++ +. +++.+..++.+ ++.++|+.++++|||+...+..++..+.. ..+++.
T Consensus 20 ~~~kliifDlDGTLld---s~--i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~~~~~~~~i~~ 94 (289)
T 3gyg_A 20 HPQYIVFCDFDETYFP---HT--IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHFIASD 94 (289)
T ss_dssp SCSEEEEEETBTTTBC---SS--CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTCCBCCSEEEET
T ss_pred CCCeEEEEECCCCCcC---CC--CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhccCCCCCeEeec
Confidence 3689999999999999 44 77777777772 34789999999999999999988865421 226777
Q ss_pred CcEEEEe---CCcceEEe----cCCccChHHHHHHHHHHHHHhhcC-----CCceEeeccceeEeeeccCCccchhccHH
Q 002984 658 HGYFIRW---NKTSEWET----NHLGADLEWKKIVEPVMRSYTEAT-----DGSNIEIKESALVWHHQDADPDFGSCQAK 725 (861)
Q Consensus 658 nG~~i~~---~~~~~~~~----~~~~~~~~w~~~v~~i~~~y~~~~-----~gs~ie~k~~~l~~~~~~~d~~~~~~~a~ 725 (861)
+|..+.. +|...+.. ..... ...+.+.++++.+.+.. ..+..+.+...+.++++..++.. ..
T Consensus 95 ~g~~i~~~~~ng~~~~~~~~~~~~~~~--~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~----~~ 168 (289)
T 3gyg_A 95 LGTEITYFSEHNFGQQDNKWNSRINEG--FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEIN----DK 168 (289)
T ss_dssp TTTEEEECCSSSTTEECHHHHHHHHTT--CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHH----HH
T ss_pred CCceEEEEcCCCcEeecCchhhhhccc--CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEecccccc----ch
Confidence 7777766 33322211 00000 11344556666554431 11222333445566776654321 11
Q ss_pred HHHHHHHHHhcCCC--EEEEE---------cCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHH
Q 002984 726 ELLDHLESVLANEP--AVVKR---------GQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFES 794 (861)
Q Consensus 726 el~~~L~~~l~~~~--~~v~~---------g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ 794 (861)
+....+...+...+ ..+.. +...+|+.|.+.+|+.+++++++++ |++++++++|||+.||++|++.
T Consensus 169 ~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~---~~~~~~~~~~GDs~~D~~~~~~ 245 (289)
T 3gyg_A 169 KNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKY---NLNTERAIAFGDSGNDVRMLQT 245 (289)
T ss_dssp HHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHTT
T ss_pred HHHHHHHHHHHHcCCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHc---CCChhhEEEEcCCHHHHHHHHh
Confidence 22233333333323 22222 2278999999999999999999999 9999999999999999999999
Q ss_pred ccccCCCCCCCCCCceEEEEeCCCC----cccceecCCH--hHHHHHHHHHHhh
Q 002984 795 ILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDDA--TDVLKLLQGLATA 842 (861)
Q Consensus 795 ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d~--~eV~~~L~~L~~~ 842 (861)
+|. +|+||++. ..|+|+++++ ++|++.|+++...
T Consensus 246 ag~--------------~~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~~~~~~~ 285 (289)
T 3gyg_A 246 VGN--------------GYLLKNATQEAKNLHNLITDSEYSKGITNTLKKLIGF 285 (289)
T ss_dssp SSE--------------EEECTTCCHHHHHHCCCBCSSCHHHHHHHHHHHHTCC
T ss_pred CCc--------------EEEECCccHHHHHhCCEEcCCCCcCHHHHHHHHHHHH
Confidence 985 78898863 5688888764 5699999988753
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-17 Score=163.44 Aligned_cols=161 Identities=9% Similarity=0.004 Sum_probs=119.8
Q ss_pred CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEE
Q 002984 334 KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVV 413 (861)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv 413 (861)
+.+|+++||+.+.||+..+++|+..+ +++|+ +.|+.+|. ++..+++++.+ .+.+ . .+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~----~~l~i~G~-----g~~~~~~~~~~----~~~~-------~--~v 58 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQD----IVLLLKGK-----GPDEKKIKLLA----QKLG-------V--KA 58 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGG----EEEEEECC-----STTHHHHHHHH----HHHT-------C--EE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCC----eEEEEEeC-----CccHHHHHHHH----HHcC-------C--eE
Confidence 56899999999999999999999986 44454 45888873 34434444433 3322 1 44
Q ss_pred EEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCc-eEEeccCC-CCcccC-CC
Q 002984 414 LIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTS-MLVVSEFI-GCSPSL-SG 490 (861)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g-~lV~Se~~-G~~~~l-~~ 490 (861)
.+ +.++.+++..+|+.||++|+||..||||++++|||+| +. |+|++... |..+.+ .+
T Consensus 59 ~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~-------------------G~vPvi~~~~~~~~~~~~~~~ 118 (166)
T 3qhp_A 59 EF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISV-------------------GIVPVIANSPLSATRQFALDE 118 (166)
T ss_dssp EC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHT-------------------TCCEEEECCTTCGGGGGCSSG
T ss_pred EE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhc-------------------CCCcEEeeCCCCchhhhccCC
Confidence 56 8999999999999999999999999999999999999 44 67774544 444554 45
Q ss_pred ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHH
Q 002984 491 AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (861)
Q Consensus 491 ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (861)
+.+++|.|+++++++|.++++ +++.+....++.++++..+++..+++
T Consensus 119 ~~~~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 119 RSLFEPNNAKDLSAKIDWWLE-NKLERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp GGEECTTCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHC------
T ss_pred ceEEcCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHCChhhhhc
Confidence 679999999999999999998 55666666667777776677666554
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=5e-16 Score=175.94 Aligned_cols=168 Identities=13% Similarity=0.036 Sum_probs=129.1
Q ss_pred EEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 002984 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVN 377 (861)
Q Consensus 298 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~ 377 (861)
++.++|+|||.+.|...... ...++++|++|||+.+.||+ ++.+.+++|+++ |+++|.
T Consensus 198 ~i~vipngvd~~~f~~~~~~------------~~~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~----l~ivG~ 255 (406)
T 2hy7_A 198 NVFHVGHGVDHNLDQLGDPS------------PYAEGIHAVAVGSMLFDPEF------FVVASKAFPQVT----FHVIGS 255 (406)
T ss_dssp TEEECCCCBCTTHHHHHCSC------------SCCSSEEEEEECCTTBCHHH------HHHHHHHCTTEE----EEEESC
T ss_pred CEEEEcCCcChHhcCccccc------------ccCCCcEEEEEeccccccCH------HHHHHHhCCCeE----EEEEeC
Confidence 67889999999988643211 12345899999999999999 555667788765 888873
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeee------
Q 002984 378 PARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYI------ 451 (861)
Q Consensus 378 p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~------ 451 (861)
|+ + ...+..+.+.|.|.++.+++.++|+.||+||+||..||||++.+|||
T Consensus 256 -----g~---------------~----~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eY 311 (406)
T 2hy7_A 256 -----GM---------------G----RHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQY 311 (406)
T ss_dssp -----SS---------------C----CCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHH
T ss_pred -----ch---------------H----HhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHH
Confidence 22 0 12233455678899999999999999999999999999999999999
Q ss_pred -eeecCCCcccccccCCCCCCCCceEEeccCCCCcccCCCceE-eCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhc
Q 002984 452 -VCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIR-VNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVS 529 (861)
Q Consensus 452 -ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~-vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~ 529 (861)
|| |.|+|+|+. .. .-..|++ |+|.|++++|++|.++++.++ .+...
T Consensus 312 la~-------------------G~PVIas~~--v~-~~~~G~l~v~~~d~~~la~ai~~ll~~~~----------~~~~~ 359 (406)
T 2hy7_A 312 DFF-------------------GLPAVCPNA--VV-GPYKSRFGYTPGNADSVIAAITQALEAPR----------VRYRQ 359 (406)
T ss_dssp HHH-------------------TCCEEEEGG--GT-CSCSSEEEECTTCHHHHHHHHHHHHHCCC----------CCCSC
T ss_pred hhC-------------------CCcEEEehh--cc-cCcceEEEeCCCCHHHHHHHHHHHHhCcc----------hhhhh
Confidence 99 456888877 11 1134788 999999999999999998765 14456
Q ss_pred cCCHhHHHHHHHHH
Q 002984 530 THDVAYWARSFAQD 543 (861)
Q Consensus 530 ~~~~~~W~~~fl~~ 543 (861)
.+++...++++++-
T Consensus 360 ~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 360 CLNWSDTTDRVLDP 373 (406)
T ss_dssp CCBHHHHHHHHHCG
T ss_pred cCCHHHHHHHHHHh
Confidence 78888887777643
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.3e-15 Score=168.12 Aligned_cols=279 Identities=14% Similarity=0.101 Sum_probs=173.4
Q ss_pred HHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHh-h-cCCEEeecChHhHH
Q 002984 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGL-L-NCDLIGFHTFDYAR 267 (861)
Q Consensus 190 ~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~l-l-~~dligF~t~~~~~ 267 (861)
++++..+| |+|++|+.....++..+..+..++|+.+..|-. .+...+. ++...+.+.+ . .+|.+-..+....+
T Consensus 80 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~ 154 (384)
T 1vgv_A 80 PILAEFKP--DVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGL-RTGDLYS--PWPEEANRTLTGHLAMYHFSPTETSRQ 154 (384)
T ss_dssp HHHHHHCC--SEEEEETTCHHHHHHHHHHHTTTCCEEEESCCC-CCSCTTS--STTHHHHHHHHHTTCSEEEESSHHHHH
T ss_pred HHHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-ccccccC--CCchHhhHHHHHhhccEEEcCcHHHHH
Confidence 34556688 899999864444454454455578887776643 2222211 2223333333 2 38999888876666
Q ss_pred HHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccC-CchHHHHhhCCchhHHHHHHHHHHcC----CC-eEEEeec
Q 002984 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGV-HMGRLESVLNLPATATKIKEIEKQFD----GK-KLILGID 341 (861)
Q Consensus 268 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~~----~~-~vil~Vd 341 (861)
.|.. .|+.. .++.++|+|+ |...+..... +.......++++++. ++ .++++++
T Consensus 155 ~l~~-----~g~~~---------------~~i~vi~n~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vl~~~g 213 (384)
T 1vgv_A 155 NLLR-----ENVAD---------------SRIFITGNTVIDALLWVRDQV-MSSDKLRSELAANYPFIDPDKKMILVTGH 213 (384)
T ss_dssp HHHH-----TTCCG---------------GGEEECCCHHHHHHHHHHHHT-TTCHHHHHHHHTTCTTCCTTSEEEEEECC
T ss_pred HHHH-----cCCCh---------------hhEEEeCChHHHHHHhhhhcc-ccchhhhHHHHHhccccCCCCCEEEEEeC
Confidence 5542 23321 1345678884 4333221100 000011124555532 33 5788999
Q ss_pred Ccccc-cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCC
Q 002984 342 DMDIF-KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420 (861)
Q Consensus 342 rld~~-KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~ 420 (861)
|+... ||+..+++|+.++.+++|+++ |+.++.+ ++ +++++++++++ .. +.+.+.+.++
T Consensus 214 r~~~~~kg~~~li~a~~~l~~~~~~~~----l~i~~g~----~~---~~~~~l~~~~~-------~~---~~v~~~g~~~ 272 (384)
T 1vgv_A 214 RRESFGRGFEEICHALADIATTHQDIQ----IVYPVHL----NP---NVREPVNRILG-------HV---KNVILIDPQE 272 (384)
T ss_dssp CBSSCCHHHHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHHT-------TC---TTEEEECCCC
T ss_pred CccccchHHHHHHHHHHHHHhhCCCeE----EEEEcCC----CH---HHHHHHHHHhh-------cC---CCEEEeCCCC
Confidence 99987 999999999999999888754 6554322 22 23444444321 11 2345666788
Q ss_pred HHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccC-CCCcccC--CCceEeCCC
Q 002984 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF-IGCSPSL--SGAIRVNPW 497 (861)
Q Consensus 421 ~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l--~~ai~vnP~ 497 (861)
..++..+|+.||++|.|| |.+.+|||+| +.|+|+|.. +|+.+.+ +.|++|+|
T Consensus 273 ~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~-------------------G~PvI~~~~~~~~~e~v~~g~g~lv~~- 327 (384)
T 1vgv_A 273 YLPFVWLMNHAWLILTDS-----GGIQEEAPSL-------------------GKPVLVMRDTTERPEAVTAGTVRLVGT- 327 (384)
T ss_dssp HHHHHHHHHHCSEEEESS-----STGGGTGGGG-------------------TCCEEEESSCCSCHHHHHHTSEEEECS-
T ss_pred HHHHHHHHHhCcEEEECC-----cchHHHHHHc-------------------CCCEEEccCCCCcchhhhCCceEEeCC-
Confidence 899999999999999999 4458999999 456898887 5655555 45799988
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHH
Q 002984 498 DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (861)
Q Consensus 498 d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl 541 (861)
|++++|++|.++++ +++.++.+.++.+++...+++.+.++.+.
T Consensus 328 d~~~la~~i~~ll~-d~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 370 (384)
T 1vgv_A 328 DKQRIVEEVTRLLK-DENEYQAMSRAHNPYGDGQACSRILEALK 370 (384)
T ss_dssp SHHHHHHHHHHHHH-CHHHHHHHHSSCCTTCCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-ChHHHhhhhhccCCCcCCCHHHHHHHHHH
Confidence 99999999999998 44445555555566655565555555443
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.65 E-value=7.1e-16 Score=171.45 Aligned_cols=275 Identities=12% Similarity=0.086 Sum_probs=174.6
Q ss_pred HHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhh--cCCEEeecChHhHH
Q 002984 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDLIGFHTFDYAR 267 (861)
Q Consensus 190 ~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll--~~dligF~t~~~~~ 267 (861)
++++..+| |+|++|......++..+..+..++++.+..|. +.+...+. ++...+.+.++ .+|.+-..+....+
T Consensus 89 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~ 163 (375)
T 3beo_A 89 KVMKEAKP--DIVLVHGDTTTTFIASLAAFYNQIPVGHVEAG-LRTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSAT 163 (375)
T ss_dssp HHHHHHCC--SEEEEETTSHHHHHHHHHHHHTTCCEEEESCC-CCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEecc-cccccccC--CChhHhhhhHHhhhhheeeCCCHHHHH
Confidence 34455688 89999976433344333333446788765553 32222221 33344555543 38998888876666
Q ss_pred HHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEeccc-CCchHHHHhhCCchhHHHHHHHHHHc-CCCeEEEeecCccc
Q 002984 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVG-VHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDI 345 (861)
Q Consensus 268 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~G-Id~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~ 345 (861)
.+.+ .|+.. .++.++|+| +|...+....... .++++++ .++.++++++|+.+
T Consensus 164 ~~~~-----~g~~~---------------~~i~vi~n~~~d~~~~~~~~~~~------~~~~~~~~~~~~vl~~~gr~~~ 217 (375)
T 3beo_A 164 NLQK-----ENKDE---------------SRIFITGNTAIDALKTTVKETYS------HPVLEKLGNNRLVLMTAHRREN 217 (375)
T ss_dssp HHHH-----TTCCG---------------GGEEECCCHHHHHHHHHCCSSCC------CHHHHTTTTSEEEEEECCCGGG
T ss_pred HHHH-----cCCCc---------------ccEEEECChhHhhhhhhhhhhhh------HHHHHhccCCCeEEEEeccccc
Confidence 5543 23311 135678998 8877664221000 1233444 34456789999998
Q ss_pred c-cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHH
Q 002984 346 F-KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEK 424 (861)
Q Consensus 346 ~-KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el 424 (861)
. ||+..+++|++++.+++|+++ ++. +. +++ .++++++.++++ .. +.+.+.+.++..++
T Consensus 218 ~~K~~~~li~a~~~l~~~~~~~~----~i~-~~-----g~~-~~~~~~~~~~~~-------~~---~~v~~~g~~~~~~~ 276 (375)
T 3beo_A 218 LGEPMRNMFRAIKRLVDKHEDVQ----VVY-PV-----HMN-PVVRETANDILG-------DY---GRIHLIEPLDVIDF 276 (375)
T ss_dssp TTHHHHHHHHHHHHHHHHCTTEE----EEE-EC-----CSC-HHHHHHHHHHHT-------TC---TTEEEECCCCHHHH
T ss_pred chhHHHHHHHHHHHHHhhCCCeE----EEE-eC-----CCC-HHHHHHHHHHhh-------cc---CCEEEeCCCCHHHH
Confidence 6 999999999999999888764 443 31 111 234445544321 11 23456678889999
Q ss_pred HHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccC-CCCcccC--CCceEeCCCCHHH
Q 002984 425 SAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF-IGCSPSL--SGAIRVNPWDIDA 501 (861)
Q Consensus 425 ~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l--~~ai~vnP~d~~~ 501 (861)
..+|+.||++|.|| |.+++|||+| +.|+|+|.. +|..+.+ ..|++|+| |+++
T Consensus 277 ~~~~~~ad~~v~~s-----g~~~lEA~a~-------------------G~Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~~ 331 (375)
T 3beo_A 277 HNVAARSYLMLTDS-----GGVQEEAPSL-------------------GVPVLVLRDTTERPEGIEAGTLKLAGT-DEET 331 (375)
T ss_dssp HHHHHTCSEEEECC-----HHHHHHHHHH-------------------TCCEEECSSCCSCHHHHHTTSEEECCS-CHHH
T ss_pred HHHHHhCcEEEECC-----CChHHHHHhc-------------------CCCEEEecCCCCCceeecCCceEEcCC-CHHH
Confidence 99999999999999 5669999999 456888854 6665555 34788887 9999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHH
Q 002984 502 VADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQ 542 (861)
Q Consensus 502 ~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~ 542 (861)
+|++|.++++ +++.++.+.++.+++...+++.+.++.+.+
T Consensus 332 la~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 371 (375)
T 3beo_A 332 IFSLADELLS-DKEAHDKMSKASNPYGDGRASERIVEAILK 371 (375)
T ss_dssp HHHHHHHHHH-CHHHHHHHCCCCCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHh-ChHhHhhhhhcCCCCCCCcHHHHHHHHHHH
Confidence 9999999998 444454444555666655666665555443
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=3.3e-16 Score=177.75 Aligned_cols=159 Identities=6% Similarity=-0.033 Sum_probs=121.5
Q ss_pred EEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCc-ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 002984 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDM-DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIV 376 (861)
Q Consensus 298 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrl-d~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~ 376 (861)
.+.++|+|+|.+.|... .....+++.|++++|+ .+.||+..+|+||+.+.+++|+. .++.|+.+|
T Consensus 218 ~~~~i~~g~d~~~~~~~-------------~~~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG 283 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYI-------------NDKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVG 283 (413)
T ss_dssp EEEEECCCCCHHHHTTT-------------TSCCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEE
T ss_pred ceEEeCCCcCchhhccc-------------ccccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEc
Confidence 35678999998766311 0012356788999996 68999999999999999988861 023488888
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecC
Q 002984 377 NPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQG 456 (861)
Q Consensus 377 ~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~ 456 (861)
..... .+. +....+.|.|.++.+|+.++|+.||+||+||..||||++++|||||
T Consensus 284 ~~~~~--------------------~~l---~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~--- 337 (413)
T 2x0d_A 284 EKHKD--------------------IAL---GKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHF--- 337 (413)
T ss_dssp SCCCC--------------------EEE---ETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHT---
T ss_pred CCchh--------------------hhc---CCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhC---
Confidence 43210 011 1224567888999999999999999999999999999999999999
Q ss_pred CCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHhcCC
Q 002984 457 TPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMR 513 (861)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~ 513 (861)
|.|+|+ ...|+.+.+. +|++|+|.|++++|++|.++++.+
T Consensus 338 ----------------G~PVV~-~~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 338 ----------------GLRVIT-NKYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSF 380 (413)
T ss_dssp ----------------TCEEEE-ECBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHT
T ss_pred ----------------CCcEEE-eCCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCH
Confidence 455776 4567766652 479999999999999999999844
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.59 E-value=7.7e-16 Score=153.52 Aligned_cols=142 Identities=17% Similarity=0.137 Sum_probs=112.5
Q ss_pred CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 002984 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (861)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~p 411 (861)
.++++|+++||+.+.||+..+++|++.+ |+++ |+.+|... +..++++. +.++.. +..+
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~----l~i~G~~~-----~~~~l~~~----~~~~~~-----~l~~ 78 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS-----KGDHAERY----ARKIMK-----IAPD 78 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC-----TTSTHHHH----HHHHHH-----HSCT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CCcE----EEEEecCc-----cHHHHHHH----HHhhhc-----ccCC
Confidence 4678999999999999999999999876 6665 88887432 21233333 221111 1123
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC--
Q 002984 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-- 489 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-- 489 (861)
.+.+.+.++.+++..+|+.||++|+||..||+|++++|||+| +.|+|+|...|..+.+.
T Consensus 79 ~v~~~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~-------------------G~PvI~~~~~~~~e~i~~~ 139 (177)
T 2f9f_A 79 NVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMAS-------------------GKPVIAVNEGGFKETVINE 139 (177)
T ss_dssp TEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHT-------------------TCCEEEESSHHHHHHCCBT
T ss_pred cEEEeCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHc-------------------CCcEEEeCCCCHHHHhcCC
Confidence 456678999999999999999999999999999999999999 56699999888887773
Q ss_pred -CceEeCCCCHHHHHHHHHHHhcCCHH
Q 002984 490 -GAIRVNPWDIDAVADAMTLAINMRDS 515 (861)
Q Consensus 490 -~ai~vnP~d~~~~A~ai~~aL~m~~~ 515 (861)
.|+++ |.|+++++++|.++++.++.
T Consensus 140 ~~g~~~-~~d~~~l~~~i~~l~~~~~~ 165 (177)
T 2f9f_A 140 KTGYLV-NADVNEIIDAMKKVSKNPDK 165 (177)
T ss_dssp TTEEEE-CSCHHHHHHHHHHHHHCTTT
T ss_pred CccEEe-CCCHHHHHHHHHHHHhCHHH
Confidence 47889 99999999999999987753
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.52 E-value=6.8e-14 Score=155.83 Aligned_cols=252 Identities=14% Similarity=0.099 Sum_probs=154.9
Q ss_pred HHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhh--cCCEEeecChHhHH
Q 002984 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDLIGFHTFDYAR 267 (861)
Q Consensus 190 ~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll--~~dligF~t~~~~~ 267 (861)
++++..+| |+|++|++....++..+..+..++|+. ..|.++.+...+. ++...+.+.++ .+|.+-..+....+
T Consensus 85 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~ 159 (376)
T 1v4v_A 85 RALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVG-HVEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKA 159 (376)
T ss_dssp HHHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEE-EETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHcCC--CEEEEeCChHHHHHHHHHHHHhCCCEE-EEeCCCccccccC--CCchHHHHHHHHHHhceeeCCCHHHHH
Confidence 45566688 899999886555665554445567875 4555543322221 22233333332 37888777776655
Q ss_pred HHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEeccc-CCchHHHHhhCCchhHHHHHHHHHHcC-CCeEEEeecCccc
Q 002984 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVG-VHMGRLESVLNLPATATKIKEIEKQFD-GKKLILGIDDMDI 345 (861)
Q Consensus 268 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~G-Id~~~~~~~~~~~~~~~~~~~l~~~~~-~~~vil~Vdrld~ 345 (861)
.|.. .|+.. .++.++|++ +|...+... ...+++++. ++.++++++|+..
T Consensus 160 ~l~~-----~g~~~---------------~ki~vi~n~~~d~~~~~~~---------~~~~~~~~~~~~~vl~~~gr~~~ 210 (376)
T 1v4v_A 160 NLLK-----EGKRE---------------EGILVTGQTGVDAVLLAAK---------LGRLPEGLPEGPYVTVTMHRREN 210 (376)
T ss_dssp HHHT-----TTCCG---------------GGEEECCCHHHHHHHHHHH---------HCCCCTTCCSSCEEEECCCCGGG
T ss_pred HHHH-----cCCCc---------------ceEEEECCchHHHHhhhhh---------hhHHHHhcCCCCEEEEEeCcccc
Confidence 5543 13210 124455654 443322110 011223332 3557788999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002984 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (861)
Q Consensus 346 ~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~ 425 (861)
.||+..+++|++++.+++|+++ |+.+.. +++ +++++++++++ . .+.+.+.+.++..++.
T Consensus 211 ~k~~~~ll~a~~~l~~~~~~~~----lv~~~g----~~~---~~~~~l~~~~~-------~---~~~v~~~g~~g~~~~~ 269 (376)
T 1v4v_A 211 WPLLSDLAQALKRVAEAFPHLT----FVYPVH----LNP---VVREAVFPVLK-------G---VRNFVLLDPLEYGSMA 269 (376)
T ss_dssp GGGHHHHHHHHHHHHHHCTTSE----EEEECC----SCH---HHHHHHHHHHT-------T---CTTEEEECCCCHHHHH
T ss_pred hHHHHHHHHHHHHHHhhCCCeE----EEEECC----CCH---HHHHHHHHHhc-------c---CCCEEEECCCCHHHHH
Confidence 9999999999999999899865 555432 222 23344444331 1 1234566678888999
Q ss_pred HHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccC-CCCcccC--CCceEeCCCCHHHH
Q 002984 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF-IGCSPSL--SGAIRVNPWDIDAV 502 (861)
Q Consensus 426 aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l--~~ai~vnP~d~~~~ 502 (861)
.+|+.||++|.+| +|+ .+|||+| +.|+|++.. +|+.+.+ ..+++++ .|++++
T Consensus 270 ~~~~~ad~~v~~S--~g~---~lEA~a~-------------------G~PvI~~~~~~~~~~~~~~g~g~lv~-~d~~~l 324 (376)
T 1v4v_A 270 ALMRASLLLVTDS--GGL---QEEGAAL-------------------GVPVVVLRNVTERPEGLKAGILKLAG-TDPEGV 324 (376)
T ss_dssp HHHHTEEEEEESC--HHH---HHHHHHT-------------------TCCEEECSSSCSCHHHHHHTSEEECC-SCHHHH
T ss_pred HHHHhCcEEEECC--cCH---HHHHHHc-------------------CCCEEeccCCCcchhhhcCCceEECC-CCHHHH
Confidence 9999999999999 655 7799999 445777654 4544444 3467885 499999
Q ss_pred HHHHHHHhcCCHHHHHHHHH
Q 002984 503 ADAMTLAINMRDSEKQLRHE 522 (861)
Q Consensus 503 A~ai~~aL~m~~~e~~~r~~ 522 (861)
|++|.++|+ +++.++.+.+
T Consensus 325 a~~i~~ll~-d~~~~~~~~~ 343 (376)
T 1v4v_A 325 YRVVKGLLE-NPEELSRMRK 343 (376)
T ss_dssp HHHHHHHHT-CHHHHHHHHH
T ss_pred HHHHHHHHh-ChHhhhhhcc
Confidence 999999998 3444443333
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=9.5e-14 Score=163.67 Aligned_cols=171 Identities=12% Similarity=0.066 Sum_probs=136.0
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc-c
Q 002984 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE-P 411 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~-p 411 (861)
+.+++++++|+.+ ||+..+|+||.++++++|+++ |+++|. +++..+++++.+. + .+.. +
T Consensus 375 ~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~----l~i~G~----~g~~~~~l~~~~~----~-------~~l~~~ 434 (568)
T 2vsy_A 375 EQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSV----LWLLSG----PGEADARLRAFAH----A-------QGVDAQ 434 (568)
T ss_dssp TTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCE----EEEECC----STTHHHHHHHHHH----H-------TTCCGG
T ss_pred CCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcE----EEEecC----CHHHHHHHHHHHH----H-------cCCChh
Confidence 4456779999999 999999999999999999876 888873 3444444444433 3 2333 4
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEe-------ccCC--
Q 002984 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVV-------SEFI-- 482 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~-------Se~~-- 482 (861)
.+.|.|.++.+++..+|+.||+||+||.+ |||++++|||+| |.|+|+ |..+
T Consensus 435 ~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~-------------------G~Pvv~~~g~~~~s~~~~~ 494 (568)
T 2vsy_A 435 RLVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWT-------------------GCPVLTTPGETFAARVAGS 494 (568)
T ss_dssp GEEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHT-------------------TCCEEBCCCSSGGGSHHHH
T ss_pred HEEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhC-------------------CCCEEeccCCCchHHHHHH
Confidence 56788899999999999999999999999 999999999999 456888 8888
Q ss_pred -----CCcccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh---ccCCHhHHHHHHHHHHHHHHHhh
Q 002984 483 -----GCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV---STHDVAYWARSFAQDLERACRDH 551 (861)
Q Consensus 483 -----G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v---~~~~~~~W~~~fl~~l~~~~~~~ 551 (861)
|+.+.+.+ |+++++++|.++++ .++.+....++.++.+ ..+++..+++.+.+-+.+..+..
T Consensus 495 ~l~~~g~~e~v~~-------~~~~la~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~ 563 (568)
T 2vsy_A 495 LNHHLGLDEMNVA-------DDAAFVAKAVALAS-DPAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRH 563 (568)
T ss_dssp HHHHHTCGGGBCS-------SHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHCCChhhhcC-------CHHHHHHHHHHHhc-CHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 88776543 89999999999998 4445555566667776 66899999999988888776543
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=3.2e-13 Score=149.43 Aligned_cols=258 Identities=13% Similarity=0.037 Sum_probs=162.2
Q ss_pred HHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHH
Q 002984 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHF 269 (861)
Q Consensus 190 ~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~F 269 (861)
++++..+| |+|++|..... ++..+..+..++|+....|..+|.. ...++. -.+|.+-..+...
T Consensus 90 ~~l~~~~p--Dvv~~~~~~~~-~~~~~~~~~~~~p~v~~~~~~~~~~--------~~~~~~--~~~d~v~~~~~~~---- 152 (364)
T 1f0k_A 90 AIMKAYKP--DVVLGMGGYVS-GPGGLAAWSLGIPVVLHEQNGIAGL--------TNKWLA--KIATKVMQAFPGA---- 152 (364)
T ss_dssp HHHHHHCC--SEEEECSSTTH-HHHHHHHHHTTCCEEEEECSSSCCH--------HHHHHT--TTCSEEEESSTTS----
T ss_pred HHHHhcCC--CEEEEeCCcCc-hHHHHHHHHcCCCEEEEecCCCCcH--------HHHHHH--HhCCEEEecChhh----
Confidence 34455677 89999965432 3344444445688888888766531 011111 1245443222110
Q ss_pred HHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCe-EEEeecCcccccC
Q 002984 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKK-LILGIDDMDIFKG 348 (861)
Q Consensus 270 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~-vil~Vdrld~~KG 348 (861)
+ . ++.++|+|++.+.+.. +.. ..++. .-.+++ +++.+||+.+.||
T Consensus 153 ----------------------~-~---~~~~i~n~v~~~~~~~----~~~---~~~~~-~~~~~~~il~~~g~~~~~k~ 198 (364)
T 1f0k_A 153 ----------------------F-P---NAEVVGNPVRTDVLAL----PLP---QQRLA-GREGPVRVLVVGGSQGARIL 198 (364)
T ss_dssp ----------------------S-S---SCEECCCCCCHHHHTS----CCH---HHHHT-TCCSSEEEEEECTTTCCHHH
T ss_pred ----------------------c-C---CceEeCCccchhhccc----chh---hhhcc-cCCCCcEEEEEcCchHhHHH
Confidence 1 1 2457899999876632 111 11110 113444 5666789999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEE-EEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHH
Q 002984 349 ISLKLLAMEQLLQQHPGMRGKVVL-VQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAY 427 (861)
Q Consensus 349 i~~~l~Af~~ll~~~P~~~~~vvL-vqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~al 427 (861)
+..+++|++.+.+ ++.+ +++| +++ .+++++ ++++. + ... +.+.+.+ +++..+
T Consensus 199 ~~~li~a~~~l~~-------~~~~l~i~G-----~~~-~~~l~~----~~~~~----~---~~~-v~~~g~~--~~~~~~ 251 (364)
T 1f0k_A 199 NQTMPQVAAKLGD-------SVTIWHQSG-----KGS-QQSVEQ----AYAEA----G---QPQ-HKVTEFI--DDMAAA 251 (364)
T ss_dssp HHHHHHHHHHHGG-------GEEEEEECC-----TTC-HHHHHH----HHHHT----T---CTT-SEEESCC--SCHHHH
T ss_pred HHHHHHHHHHhcC-------CcEEEEEcC-----Cch-HHHHHH----HHhhc----C---CCc-eEEecch--hhHHHH
Confidence 9999999998743 2443 4344 222 233433 33332 1 112 3455666 789999
Q ss_pred HHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcc-------cC---CCceEeCCC
Q 002984 428 YAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSP-------SL---SGAIRVNPW 497 (861)
Q Consensus 428 y~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~-------~l---~~ai~vnP~ 497 (861)
|+.||++|+|| | +++++|||+| +.|+|+|...|... .+ ..|++++|.
T Consensus 252 ~~~ad~~v~~s---g-~~~~~EAma~-------------------G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~ 308 (364)
T 1f0k_A 252 YAWADVVVCRS---G-ALTVSEIAAA-------------------GLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQP 308 (364)
T ss_dssp HHHCSEEEECC---C-HHHHHHHHHH-------------------TCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGG
T ss_pred HHhCCEEEECC---c-hHHHHHHHHh-------------------CCCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccc
Confidence 99999999999 4 8999999999 45699999887632 34 348999998
Q ss_pred C--HHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHHHHhh
Q 002984 498 D--IDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDH 551 (861)
Q Consensus 498 d--~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~ 551 (861)
| ++++|++|.++ +++.++...++.++++..+++..-++.+.+.+++..+.|
T Consensus 309 d~~~~~la~~i~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 361 (364)
T 1f0k_A 309 QLSVDAVANTLAGW---SRETLLTMAERARAASIPDATERVANEVSRVARALEHHH 361 (364)
T ss_dssp GCCHHHHHHHHHTC---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC----
T ss_pred cCCHHHHHHHHHhc---CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHhhc
Confidence 8 99999999988 566677777777888877887777777766666544433
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=3.2e-13 Score=151.17 Aligned_cols=249 Identities=10% Similarity=-0.022 Sum_probs=153.9
Q ss_pred HHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHH-hhcCCEEeecChHhHH
Q 002984 189 DKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRG-LLNCDLIGFHTFDYAR 267 (861)
Q Consensus 189 ~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~-ll~~dligF~t~~~~~ 267 (861)
.++++..+| |+|+++.++++. .++.... . ++.+..+.--+.+ +.+. +-.+|.|-.++...++
T Consensus 104 ~~~l~~~~p--Div~~~~~~~~~--~~~~~~~-~-p~~~~~~~~~~~~-----------~~~~~~~~~d~ii~~S~~~~~ 166 (374)
T 2xci_A 104 KRFEELSKP--KALIVVEREFWP--SLIIFTK-V-PKILVNAYAKGSL-----------IEKILSKKFDLIIMRTQEDVE 166 (374)
T ss_dssp HHHHHHHCC--SEEEEESCCCCH--HHHHHCC-S-CEEEEEECCCCCH-----------HHHHHHTTCSEEEESCHHHHH
T ss_pred HHHHHHhCC--CEEEEECccCcH--HHHHHHh-C-CEEEEEeecCchH-----------HHHHHHHhCCEEEECCHHHHH
Confidence 344566788 899988887763 3443211 1 4544433211111 2222 3458999999998877
Q ss_pred HHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCccccc
Q 002984 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFK 347 (861)
Q Consensus 268 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~K 347 (861)
.|.+ +|+. +|.++|+|. |.... +. ++.+. +++++++++ ..|
T Consensus 167 ~l~~-----~g~~-----------------ki~vi~n~~----f~~~~--~~--------~~~l~-~~vi~~~~~--~~k 207 (374)
T 2xci_A 167 KFKT-----FGAK-----------------RVFSCGNLK----FICQK--GK--------GIKLK-GEFIVAGSI--HTG 207 (374)
T ss_dssp HHHT-----TTCC-----------------SEEECCCGG----GCCCC--CS--------CCCCS-SCEEEEEEE--CGG
T ss_pred HHHH-----cCCC-----------------eEEEcCCCc----cCCCc--Ch--------hhhhc-CCEEEEEeC--CCc
Confidence 6653 1221 345566652 21100 00 01111 257777776 468
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHH-HHHHHHHHHHHHHHhhccC--CCCcccEEEEcCCCCHHHH
Q 002984 348 GISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDV-QEAKKETYLTAKRINEVYG--SPNYEPVVLIDRPVPRFEK 424 (861)
Q Consensus 348 Gi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~-~~~~~~v~~l~~~IN~~~~--~~~~~pvv~~~~~v~~~el 424 (861)
|+..+++||.++.+++|+++ |+++| ++++. +++++.+ ++.+-.+. ..+. ..+++.+. .+|+
T Consensus 208 ~~~~ll~A~~~l~~~~p~~~----lvivG-----~g~~~~~~l~~~~----~~~gl~~~~~~~~~-~~v~~~~~--~~dl 271 (374)
T 2xci_A 208 EVEIILKAFKEIKKTYSSLK----LILVP-----RHIENAKIFEKKA----RDFGFKTSFFENLE-GDVILVDR--FGIL 271 (374)
T ss_dssp GHHHHHHHHHHHHTTCTTCE----EEEEE-----SSGGGHHHHHHHH----HHTTCCEEETTCCC-SSEEECCS--SSCH
T ss_pred hHHHHHHHHHHHHhhCCCcE----EEEEC-----CCHHHHHHHHHHH----HHCCCceEEecCCC-CcEEEECC--HHHH
Confidence 99999999999999999887 88787 34443 3444433 33221110 0000 23455553 4789
Q ss_pred HHHHHhcccceecc-cccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec-cCCCCcccC----CCceEeCCCC
Q 002984 425 SAYYAVAECCIVNA-VRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-EFIGCSPSL----SGAIRVNPWD 498 (861)
Q Consensus 425 ~aly~~ADv~vvtS-~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l----~~ai~vnP~d 498 (861)
..+|+.||+++++| ..|++|++++||||| +.|+|++ +..|+.+.+ .++.++.|.|
T Consensus 272 ~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~-------------------G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d 332 (374)
T 2xci_A 272 KELYPVGKIAIVGGTFVNIGGHNLLEPTCW-------------------GIPVIYGPYTHKVNDLKEFLEKEGAGFEVKN 332 (374)
T ss_dssp HHHGGGEEEEEECSSSSSSCCCCCHHHHTT-------------------TCCEEECSCCTTSHHHHHHHHHTTCEEECCS
T ss_pred HHHHHhCCEEEECCcccCCCCcCHHHHHHh-------------------CCCEEECCCccChHHHHHHHHHCCCEEEeCC
Confidence 99999999988876 457789999999999 4557765 556666544 3578888999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHhhhhhcc
Q 002984 499 IDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (861)
Q Consensus 499 ~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~ 530 (861)
++++|++|.++|+ + +.++.+.++.++++.+
T Consensus 333 ~~~La~ai~~ll~-d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 333 ETELVTKLTELLS-V-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp HHHHHHHHHHHHH-S-CCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-H-HHHHHHHHHHHHHHHh
Confidence 9999999999998 3 4455555555555433
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.43 E-value=5.1e-13 Score=141.68 Aligned_cols=76 Identities=17% Similarity=0.207 Sum_probs=61.4
Q ss_pred EEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCC-cchHHHHHHccccCCCCCCCCCCceEEEEeCCC-----Cc--
Q 002984 749 VEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDD-RSDEDMFESILSTVSGPSLPVPPEIFACTVGRK-----PS-- 820 (861)
Q Consensus 749 vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s-- 820 (861)
.|+.+.+.+|+.+++.+++++ |++++++++|||+ .||++|++.+|.. ++.|.+|.. +.
T Consensus 176 ~~~~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~~~~aG~~-----------~~~v~~g~~~~~~~~~~~ 241 (266)
T 3pdw_A 176 VQPVFIGKPESIIMEQAMRVL---GTDVSETLMVGDNYATDIMAGINAGMD-----------TLLVHTGVTKREHMTDDM 241 (266)
T ss_dssp CCCEECSTTSSHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHHTCE-----------EEEECCC------CCTTS
T ss_pred CCccccCCCCHHHHHHHHHHc---CCChhhEEEECCCcHHHHHHHHHCCCe-----------EEEECCCCCChHHHHhcC
Confidence 345677888999999999999 9999999999999 8999999999974 345566642 12
Q ss_pred -ccceecCCHhHHHHHHHH
Q 002984 821 -KAKYYLDDATDVLKLLQG 838 (861)
Q Consensus 821 -~Aky~l~d~~eV~~~L~~ 838 (861)
.|+|++++..++.+-.+.
T Consensus 242 ~~~d~v~~~~~el~~~~~~ 260 (266)
T 3pdw_A 242 EKPTHAIDSLTEWIPYIEG 260 (266)
T ss_dssp CCCSEEESSGGGGHHHHHH
T ss_pred CCCCEEeCCHHHHHHHhhc
Confidence 599999999988876654
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.41 E-value=8.4e-14 Score=147.85 Aligned_cols=72 Identities=19% Similarity=0.251 Sum_probs=60.2
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCC-cchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----c------
Q 002984 752 KPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDD-RSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----S------ 820 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s------ 820 (861)
...+..|+.+++.+++++ |++++++++|||+ .||+.|.+.+|.. ++.|.+|+.. .
T Consensus 183 ~~~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~~~~~g~~-----------~~~v~~g~~~~~~~~~~~~~~ 248 (268)
T 3qgm_A 183 VVVGKPSEVIMREALDIL---GLDAKDVAVVGDQIDVDVAAGKAIGAE-----------TVLVLTGVTTRENLDQMIERH 248 (268)
T ss_dssp EECSTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHHTCE-----------EEEESSSSCCTTTHHHHHHHH
T ss_pred eecCCCCHHHHHHHHHHh---CCCchhEEEECCCchHHHHHHHHCCCc-----------EEEECCCCCCHHHHHhhcccc
Confidence 556778999999999999 9999999999999 6999999999973 3567777642 1
Q ss_pred --ccceecCCHhHHHHHHH
Q 002984 821 --KAKYYLDDATDVLKLLQ 837 (861)
Q Consensus 821 --~Aky~l~d~~eV~~~L~ 837 (861)
.|+|++++..++.++|+
T Consensus 249 ~~~~d~v~~~~~el~~~l~ 267 (268)
T 3qgm_A 249 GLKPDYVFNSLKDMVEALE 267 (268)
T ss_dssp TCCCSEEESSHHHHHHTC-
T ss_pred CCCCCEEECCHHHHHHHHh
Confidence 68999999999988764
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.5e-12 Score=130.26 Aligned_cols=140 Identities=19% Similarity=0.213 Sum_probs=106.7
Q ss_pred ccceEEEecCCccccCCCCC---C----CCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEE
Q 002984 589 TERRAIFLDYDGTVVPETSI---I----KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYF 661 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~---~----~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (861)
.++|+|+||+||||++.... . +.+++++.++|++| ++.|+.++++|||+...+..++..+ ++.. ++
T Consensus 6 ~~ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L-~~~G~~~~i~Tg~~~~~~~~~~~~l---gl~~---~~ 78 (180)
T 1k1e_A 6 ENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKML-MDADIQVAVLSGRDSPILRRRIADL---GIKL---FF 78 (180)
T ss_dssp GGCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHH-HHTTCEEEEEESCCCHHHHHHHHHH---TCCE---EE
T ss_pred hCCeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHH-HHCCCeEEEEeCCCcHHHHHHHHHc---CCce---ee
Confidence 35799999999999982110 1 13567889999999 7899999999999999888887543 2210 00
Q ss_pred EEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEE
Q 002984 662 IRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAV 741 (861)
Q Consensus 662 i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 741 (861)
.+
T Consensus 79 ---~~--------------------------------------------------------------------------- 80 (180)
T 1k1e_A 79 ---LG--------------------------------------------------------------------------- 80 (180)
T ss_dssp ---ES---------------------------------------------------------------------------
T ss_pred ---cC---------------------------------------------------------------------------
Confidence 00
Q ss_pred EEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---
Q 002984 742 VKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK--- 818 (861)
Q Consensus 742 v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 818 (861)
..+|+.+++.+++++ |++++++++|||+.||++|++.+|. +++++++
T Consensus 81 -------------~k~k~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag~--------------~~~~~~~~~~ 130 (180)
T 1k1e_A 81 -------------KLEKETACFDLMKQA---GVTAEQTAYIGDDSVDLPAFAACGT--------------SFAVADAPIY 130 (180)
T ss_dssp -------------CSCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHH
T ss_pred -------------CCCcHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCC--------------eEEeCCccHH
Confidence 045999999999999 9999999999999999999999986 5667765
Q ss_pred -CcccceecCCH--hHHH-HHHHHHHhhc
Q 002984 819 -PSKAKYYLDDA--TDVL-KLLQGLATAS 843 (861)
Q Consensus 819 -~s~Aky~l~d~--~eV~-~~L~~L~~~~ 843 (861)
...|+|++++. .+++ .+++.+....
T Consensus 131 ~~~~ad~v~~~~~~~g~~~~~~~~~l~~~ 159 (180)
T 1k1e_A 131 VKNAVDHVLSTHGGKGAFREMSDMILQAQ 159 (180)
T ss_dssp HHTTSSEECSSCTTTTHHHHHHHHHHHHT
T ss_pred HHhhCCEEecCCCCCcHHHHHHHHHHHhc
Confidence 36788988753 5566 7777766543
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1.7e-12 Score=137.85 Aligned_cols=210 Identities=16% Similarity=0.168 Sum_probs=121.3
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEC---CCChhhHHHHhccccC----CceEecCcEE
Q 002984 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAPCEM----LGIAAEHGYF 661 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~T---GR~~~~l~~~~~~~~~----lgliaenG~~ 661 (861)
.+.+.|+||+||||++ + ..+++.+.++|+++ ++.|+.|+++| ||+...+.+.+..+.. -.+++.||+.
T Consensus 15 ~~~~~v~~DlDGTLl~---~-~~~~~~~~~~l~~l-~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~~~~~~ 89 (271)
T 1vjr_A 15 DKIELFILDMDGTFYL---D-DSLLPGSLEFLETL-KEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEIT 89 (271)
T ss_dssp GGCCEEEECCBTTTEE---T-TEECTTHHHHHHHH-HHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEHHHHH
T ss_pred cCCCEEEEcCcCcEEe---C-CEECcCHHHHHHHH-HHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEcHHHHH
Confidence 3578999999999999 4 55778999999998 78999999999 9999998888854310 0133333322
Q ss_pred EEeC-----CcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhc
Q 002984 662 IRWN-----KTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLA 736 (861)
Q Consensus 662 i~~~-----~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~ 736 (861)
+... +...+.. ... .+...++.+ |..+........+........+ ....+.++.+ .
T Consensus 90 ~~~~~~~~~~~~~~~~----~~~----~~~~~l~~~-----g~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l----~ 150 (271)
T 1vjr_A 90 AEHMLKRFGRCRIFLL----GTP----QLKKVFEAY-----GHVIDEENPDFVVLGFDKTLTY--ERLKKACILL----R 150 (271)
T ss_dssp HHHHHHHHCSCEEEEE----SCH----HHHHHHHHT-----TCEECSSSCSEEEECCCTTCCH--HHHHHHHHHH----T
T ss_pred HHHHHHhCCCCeEEEE----cCH----HHHHHHHHc-----CCccCCCCCCEEEEeCCCCcCH--HHHHHHHHHH----H
Confidence 1110 0001100 000 011111111 1111100000011111100000 1112222222 1
Q ss_pred CCCEEEEEcC------------------------eEEEE-ecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCC-cchHH
Q 002984 737 NEPAVVKRGQ------------------------HIVEV-KPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDD-RSDED 790 (861)
Q Consensus 737 ~~~~~v~~g~------------------------~~vEI-~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~-~ND~~ 790 (861)
.....+.++. ...|. .+.+.+|+.+++.+++++ |++++++++|||+ .||++
T Consensus 151 ~~~~~i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l---gi~~~e~i~iGD~~~nDi~ 227 (271)
T 1vjr_A 151 KGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKF---GVPKERMAMVGDRLYTDVK 227 (271)
T ss_dssp TTCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHH---TCCGGGEEEEESCHHHHHH
T ss_pred CCCeEEEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHh---CCCCceEEEECCCcHHHHH
Confidence 1111121111 01244 677889999999999999 9999999999999 69999
Q ss_pred HHHHccccCCCCCCCCCCceEEEEeCCCC--------cccceecCCHhHHHHHH
Q 002984 791 MFESILSTVSGPSLPVPPEIFACTVGRKP--------SKAKYYLDDATDVLKLL 836 (861)
Q Consensus 791 Mf~~ag~~~~~~~~~~~~~~~av~vG~~~--------s~Aky~l~d~~eV~~~L 836 (861)
|++.+|.. ++.|..|... ..++|++++..++.++|
T Consensus 228 ~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 228 LGKNAGIV-----------SILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp HHHHHTCE-----------EEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred HHHHcCCe-----------EEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 99999974 3444455432 26889999999988776
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.35 E-value=2.5e-13 Score=140.87 Aligned_cols=70 Identities=13% Similarity=0.083 Sum_probs=58.6
Q ss_pred EEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCC-cchHHHHHHccccCCCCCCCCCCceEEEEeCCCC--------
Q 002984 749 VEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDD-RSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP-------- 819 (861)
Q Consensus 749 vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-------- 819 (861)
.|+.+.+.+|+.+++++++++ |++++++++|||+ .||++|++.+|.+ ++.|+.|+..
T Consensus 169 ~~~~~~~kpk~~~~~~~~~~l---gi~~~~~i~iGD~~~nDi~~~~~aG~~-----------~~~v~~g~~~~~~~~~~~ 234 (250)
T 2c4n_A 169 RKPFYVGKPSPWIIRAALNKM---QAHSEETVIVGDNLRTDILAGFQAGLE-----------TILVLSGVSSLDDIDSMP 234 (250)
T ss_dssp CCCEECSTTSTHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCE-----------EEEESSSSCCGGGGSSCS
T ss_pred CCceEeCCCCHHHHHHHHHHc---CCCcceEEEECCCchhHHHHHHHcCCe-----------EEEECCCCCChhhhhhcC
Confidence 356788999999999999999 9999999999999 7999999999984 3556667532
Q ss_pred cccceecCCHhHH
Q 002984 820 SKAKYYLDDATDV 832 (861)
Q Consensus 820 s~Aky~l~d~~eV 832 (861)
..|+|++++..++
T Consensus 235 ~~~~~v~~~~~el 247 (250)
T 2c4n_A 235 FRPSWIYPSVAEI 247 (250)
T ss_dssp SCCSEEESSGGGC
T ss_pred CCCCEEECCHHHh
Confidence 3688888887765
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.7e-12 Score=136.77 Aligned_cols=77 Identities=21% Similarity=0.252 Sum_probs=63.5
Q ss_pred EEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCCC-C-------c
Q 002984 750 EVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGRK-P-------S 820 (861)
Q Consensus 750 EI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-~-------s 820 (861)
|+.+.+.+|+.+++.+++++ |++++++++|||+. ||++|++.+|.+ ++.|..|.. + .
T Consensus 184 ~~~~~~kpk~~~~~~~~~~l---gi~~~~~i~iGD~~~nDi~~a~~aG~~-----------~~~v~~g~~~~~~~~~~~~ 249 (271)
T 2x4d_A 184 KAEVVGKPSPEFFKSALQAI---GVEAHQAVMIGDDIVGDVGGAQRCGMR-----------ALQVRTGKFRPSDEHHPEV 249 (271)
T ss_dssp CCEEESTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEESSTTCCGGGGGCSSC
T ss_pred ceeeccCCCHHHHHHHHHHh---CCCcceEEEECCCcHHHHHHHHHCCCc-----------EEEEcCCCCCchhhcccCC
Confidence 44677889999999999999 99999999999998 999999999984 345656631 1 3
Q ss_pred ccceecCCHhHHHHHHHHHH
Q 002984 821 KAKYYLDDATDVLKLLQGLA 840 (861)
Q Consensus 821 ~Aky~l~d~~eV~~~L~~L~ 840 (861)
.|++++++..++.++|..+.
T Consensus 250 ~~~~~~~~~~el~~~l~~~~ 269 (271)
T 2x4d_A 250 KADGYVDNLAEAVDLLLQHA 269 (271)
T ss_dssp CCSEEESSHHHHHHHHHHHC
T ss_pred CCCEEeCCHHHHHHHHHhhc
Confidence 47899999999988886653
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.34 E-value=3.5e-11 Score=135.61 Aligned_cols=251 Identities=15% Similarity=0.128 Sum_probs=156.8
Q ss_pred HHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHh--hcCCEEeecChHhHH
Q 002984 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGL--LNCDLIGFHTFDYAR 267 (861)
Q Consensus 190 ~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~l--l~~dligF~t~~~~~ 267 (861)
++++..+| |+|++|+.-...+|..+..+..++|++. .|.+..+...+ -|+++++.+-+ -.+|++-..+....+
T Consensus 105 ~~l~~~kP--DvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs~~~~--~~~~~~~~r~~~~~~a~~~~~~se~~~~ 179 (396)
T 3dzc_A 105 QVLSSEQP--DVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRTGNIY--SPWPEEGNRKLTAALTQYHFAPTDTSRA 179 (396)
T ss_dssp HHHHHHCC--SEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCCSCTT--SSTTHHHHHHHHHHTCSEEEESSHHHHH
T ss_pred HHHHhcCC--CEEEEECCchhHHHHHHHHHHhCCCEEE-EECCccccccc--cCCcHHHHHHHHHHhcCEEECCCHHHHH
Confidence 34456688 8999998777777766666667888763 34444332222 24556676665 357999888988887
Q ss_pred HHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecc-cCCchHHHHhhCCchhHHHHHHHHHHcC----CCe-EEEeec
Q 002984 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPV-GVHMGRLESVLNLPATATKIKEIEKQFD----GKK-LILGID 341 (861)
Q Consensus 268 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~-GId~~~~~~~~~~~~~~~~~~~l~~~~~----~~~-vil~Vd 341 (861)
+|.. .|+.. + +|.+.++ ++|...+..... ........++++++. +++ +++...
T Consensus 180 ~l~~-----~G~~~--~-------------ki~vvGn~~~d~~~~~~~~~-~~~~~~~~~~r~~lg~l~~~~~~vlv~~h 238 (396)
T 3dzc_A 180 NLLQ-----ENYNA--E-------------NIFVTGNTVIDALLAVREKI-HTDMDLQATLESQFPMLDASKKLILVTGH 238 (396)
T ss_dssp HHHH-----TTCCG--G-------------GEEECCCHHHHHHHHHHHHH-HHCHHHHHHHHHTCTTCCTTSEEEEEECS
T ss_pred HHHH-----cCCCc--C-------------cEEEECCcHHHHHHHhhhhc-ccchhhHHHHHHHhCccCCCCCEEEEEEC
Confidence 7764 24421 1 1233333 455433321000 000011256666653 344 455677
Q ss_pred Ccc-cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCC
Q 002984 342 DMD-IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420 (861)
Q Consensus 342 rld-~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~ 420 (861)
|.. ..||+..+++|++++.+++|+++ +|.++.+ ++ ++++.+++.. +. . +-+.+.++++
T Consensus 239 R~~~~~~~~~~ll~A~~~l~~~~~~~~----~v~~~g~----~~---~~~~~l~~~~-------~~--~-~~v~~~~~lg 297 (396)
T 3dzc_A 239 RRESFGGGFERICQALITTAEQHPECQ----ILYPVHL----NP---NVREPVNKLL-------KG--V-SNIVLIEPQQ 297 (396)
T ss_dssp CBCCCTTHHHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHT-------TT--C-TTEEEECCCC
T ss_pred CcccchhHHHHHHHHHHHHHHhCCCce----EEEEeCC----Ch---HHHHHHHHHH-------cC--C-CCEEEeCCCC
Confidence 754 34889999999999999999864 5544322 12 2333443321 11 1 3345667888
Q ss_pred HHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec-cCCCCcccC--CCceEeCCC
Q 002984 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-EFIGCSPSL--SGAIRVNPW 497 (861)
Q Consensus 421 ~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l--~~ai~vnP~ 497 (861)
..++..+|+.||++|.+| | |++ .||++|+ .|+|++ +.++..+.+ ..+++|.+
T Consensus 298 ~~~~~~l~~~ad~vv~~S---G-g~~-~EA~a~G-------------------~PvV~~~~~~~~~e~v~~G~~~lv~~- 352 (396)
T 3dzc_A 298 YLPFVYLMDRAHIILTDS---G-GIQ-EEAPSLG-------------------KPVLVMRETTERPEAVAAGTVKLVGT- 352 (396)
T ss_dssp HHHHHHHHHHCSEEEESC---S-GGG-TTGGGGT-------------------CCEEECCSSCSCHHHHHHTSEEECTT-
T ss_pred HHHHHHHHHhcCEEEECC---c-cHH-HHHHHcC-------------------CCEEEccCCCcchHHHHcCceEEcCC-
Confidence 899999999999999998 6 655 9999994 457777 455554444 33566655
Q ss_pred CHHHHHHHHHHHhcC
Q 002984 498 DIDAVADAMTLAINM 512 (861)
Q Consensus 498 d~~~~A~ai~~aL~m 512 (861)
|.++++++|.++|+.
T Consensus 353 d~~~l~~ai~~ll~d 367 (396)
T 3dzc_A 353 NQQQICDALSLLLTD 367 (396)
T ss_dssp CHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHcC
Confidence 899999999999973
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.32 E-value=4.1e-12 Score=134.76 Aligned_cols=54 Identities=20% Similarity=0.273 Sum_probs=48.1
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEC---CCChhhHHHHhcc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAP 648 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~T---GR~~~~l~~~~~~ 648 (861)
++|+|+||+||||++ .++.+ +.++++|+++ ++.|+.|+++| ||+...+...+..
T Consensus 4 ~~kli~~DlDGTLl~---~~~~i-~~~~eal~~l-~~~G~~vvl~Tn~~gr~~~~~~~~l~~ 60 (264)
T 3epr_A 4 AYKGYLIDLDGTIYK---GKSRI-PAGERFIERL-QEKGIPYMLVTNNTTRTPESVQEMLRG 60 (264)
T ss_dssp CCCEEEECCBTTTEE---TTEEC-HHHHHHHHHH-HHHTCCEEEEECCCSSCHHHHHHHHHT
T ss_pred CCCEEEEeCCCceEe---CCEEC-cCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 489999999999999 77778 8999999999 79999999999 8888888877754
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.5e-11 Score=118.70 Aligned_cols=138 Identities=18% Similarity=0.187 Sum_probs=102.4
Q ss_pred ccceEEEecCCccccCCCC---C----CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEE
Q 002984 589 TERRAIFLDYDGTVVPETS---I----IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYF 661 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~---~----~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (861)
.++|+|+||+||||++... . ...+++.+.++|+.| ++.|+.++|+||++...+..++..+ ++.. ++
T Consensus 7 ~~~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~~~i~T~~~~~~~~~~l~~~---gl~~---~~ 79 (162)
T 2p9j_A 7 KKLKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLL-QKMGITLAVISGRDSAPLITRLKEL---GVEE---IY 79 (162)
T ss_dssp HHCCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHH-HTTTCEEEEEESCCCHHHHHHHHHT---TCCE---EE
T ss_pred cceeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHH-HHCCCEEEEEeCCCcHHHHHHHHHc---CCHh---hc
Confidence 3589999999999997211 0 122467789999999 7899999999999999888887543 2210 00
Q ss_pred EEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEE
Q 002984 662 IRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAV 741 (861)
Q Consensus 662 i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 741 (861)
.
T Consensus 80 ---------~---------------------------------------------------------------------- 80 (162)
T 2p9j_A 80 ---------T---------------------------------------------------------------------- 80 (162)
T ss_dssp ---------E----------------------------------------------------------------------
T ss_pred ---------c----------------------------------------------------------------------
Confidence 0
Q ss_pred EEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---
Q 002984 742 VKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK--- 818 (861)
Q Consensus 742 v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 818 (861)
.+..|..+++.+++++ +++++++++|||+.||+.|++.+|. .+.+++.
T Consensus 81 ------------~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~ag~--------------~~~~~~~~~~ 131 (162)
T 2p9j_A 81 ------------GSYKKLEIYEKIKEKY---SLKDEEIGFIGDDVVDIEVMKKVGF--------------PVAVRNAVEE 131 (162)
T ss_dssp ------------CC--CHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHH
T ss_pred ------------CCCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCC--------------eEEecCccHH
Confidence 0235889999999999 9999999999999999999999986 4455553
Q ss_pred -CcccceecCCHhH--HH-HHHHHHHh
Q 002984 819 -PSKAKYYLDDATD--VL-KLLQGLAT 841 (861)
Q Consensus 819 -~s~Aky~l~d~~e--V~-~~L~~L~~ 841 (861)
...|+|++++.++ ++ ++++.+.+
T Consensus 132 ~~~~a~~v~~~~~~~g~~~~~~~~~~~ 158 (162)
T 2p9j_A 132 VRKVAVYITQRNGGEGALREVAELIHF 158 (162)
T ss_dssp HHHHCSEECSSCSSSSHHHHHHHHHHH
T ss_pred HHhhCCEEecCCCCCcHHHHHHHHHHH
Confidence 2468899877543 44 67777654
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.22 E-value=3.5e-14 Score=156.32 Aligned_cols=67 Identities=19% Similarity=0.105 Sum_probs=55.1
Q ss_pred EecCCCCHHHHHHHHHHHhhcCCCCCCe----EEEEeCCcchHHHHHHc----cccCCCCCCCCCCceEEEEeCCC----
Q 002984 751 VKPQGVSKGLVAEKVLVRMFNGGRPPDF----VMCVGDDRSDEDMFESI----LSTVSGPSLPVPPEIFACTVGRK---- 818 (861)
Q Consensus 751 I~p~gvsKg~al~~ll~~l~~~gi~~d~----vlaiGD~~ND~~Mf~~a----g~~~~~~~~~~~~~~~av~vG~~---- 818 (861)
+.|.+++|+.+++.+ ++++ |++|||+.||++||+.+ |. +|+| ++
T Consensus 201 i~~~g~~K~~al~gi---------~~~~~~~~via~GDs~NDi~ml~~A~~~~g~--------------~vam-na~~~l 256 (332)
T 1y8a_A 201 KAVGAGEKAKIMRGY---------CESKGIDFPVVVGDSISDYKMFEAARGLGGV--------------AIAF-NGNEYA 256 (332)
T ss_dssp BCCCHHHHHHHHHHH---------HHHHTCSSCEEEECSGGGHHHHHHHHHTTCE--------------EEEE-SCCHHH
T ss_pred ecCCCCCHHHHHhcc---------ChhhcCceEEEEeCcHhHHHHHHHHhhcCCe--------------EEEe-cCCHHH
Confidence 889999999999833 3456 99999999999999999 86 5666 65
Q ss_pred CcccceecCC--HhHHHHHHHHHHh
Q 002984 819 PSKAKYYLDD--ATDVLKLLQGLAT 841 (861)
Q Consensus 819 ~s~Aky~l~d--~~eV~~~L~~L~~ 841 (861)
+..|+|++.+ .++|.++|+.+..
T Consensus 257 k~~Ad~v~~~~~~dGV~~~l~~~~~ 281 (332)
T 1y8a_A 257 LKHADVVIISPTAMSEAKVIELFME 281 (332)
T ss_dssp HTTCSEEEECSSTHHHHHHHHHHHH
T ss_pred HhhCcEEecCCCCCHHHHHHHHHHH
Confidence 3678898854 7889999998774
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.8e-11 Score=121.87 Aligned_cols=67 Identities=18% Similarity=0.197 Sum_probs=53.8
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccceecCC--H
Q 002984 756 VSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDD--A 829 (861)
Q Consensus 756 vsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d--~ 829 (861)
.+|+.+++++++++ |++++++++|||+.||++|++.+|. ++++++.. ..|++++.+ .
T Consensus 85 ~~k~~~l~~~~~~~---~~~~~~~~~vGD~~nD~~~~~~ag~--------------~v~~~~~~~~~~~~ad~v~~~~~~ 147 (176)
T 3mmz_A 85 DRKDLALKQWCEEQ---GIAPERVLYVGNDVNDLPCFALVGW--------------PVAVASAHDVVRGAARAVTTVPGG 147 (176)
T ss_dssp SCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTCCHHHHHHSSEECSSCTT
T ss_pred CChHHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCCC--------------eEECCChhHHHHHhCCEEecCCCC
Confidence 45999999999999 9999999999999999999999985 67887753 568888865 3
Q ss_pred hHHHHHHHHH
Q 002984 830 TDVLKLLQGL 839 (861)
Q Consensus 830 ~eV~~~L~~L 839 (861)
+++++.+..+
T Consensus 148 ~g~~~~l~~~ 157 (176)
T 3mmz_A 148 DGAIREIASW 157 (176)
T ss_dssp TTHHHHHHHH
T ss_pred CcHHHHHHHH
Confidence 4444444433
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.4e-10 Score=130.89 Aligned_cols=260 Identities=12% Similarity=0.134 Sum_probs=158.2
Q ss_pred HHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhc--CCEEeecChHhHH
Q 002984 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLN--CDLIGFHTFDYAR 267 (861)
Q Consensus 190 ~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~--~dligF~t~~~~~ 267 (861)
++++..+| |+|.+|+.-...++..+..+..++|++ ..|.+..+...|+ |+++++.+-++. +|++-..+.++.+
T Consensus 108 ~~l~~~kP--D~Vi~~gd~~~~l~~~laA~~~~IPv~-h~~aglrs~~~~~--~~p~~~~r~~~~~~a~~~~~~se~~~~ 182 (403)
T 3ot5_A 108 EVIAAENP--DIVLVHGDTTTSFAAGLATFYQQKMLG-HVEAGLRTWNKYS--PFPEEMNRQLTGVMADIHFSPTKQAKE 182 (403)
T ss_dssp HHHHHHCC--SEEEEETTCHHHHHHHHHHHHTTCEEE-EESCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHcCC--CEEEEECCchhHHHHHHHHHHhCCCEE-EEECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHH
Confidence 34456688 899999976666665555555678874 3444432322222 445666665533 7998888988888
Q ss_pred HHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEec-ccCCchHHHHhhCCchhHHHHHHHHHHc-CCCeEEEeecCccc
Q 002984 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILP-VGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDI 345 (861)
Q Consensus 268 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p-~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~ 345 (861)
+|.. .|+.. + +|.+.+ +++|...+.. ...... +.++++ .++.+++.++|...
T Consensus 183 ~l~~-----~Gi~~--~-------------~i~vvGn~~~D~~~~~~--~~~~~~----~~~~~l~~~~~vlv~~~r~~~ 236 (403)
T 3ot5_A 183 NLLA-----EGKDP--A-------------TIFVTGNTAIDALKTTV--QKDYHH----PILENLGDNRLILMTAHRREN 236 (403)
T ss_dssp HHHH-----TTCCG--G-------------GEEECCCHHHHHHHHHS--CTTCCC----HHHHSCTTCEEEEECCCCHHH
T ss_pred HHHH-----cCCCc--c-------------cEEEeCCchHHHHHhhh--hhhcch----HHHHhccCCCEEEEEeCcccc
Confidence 8875 34421 1 122333 3566544321 100000 122223 34456778888754
Q ss_pred -ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHH
Q 002984 346 -FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEK 424 (861)
Q Consensus 346 -~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el 424 (861)
.|++...++|+.++.+++|+++ +|.++.|. + .+++.+++.. +. . +-+.+.++++..++
T Consensus 237 ~~~~l~~ll~a~~~l~~~~~~~~----~v~~~~~~----~---~~~~~l~~~~-------~~--~-~~v~l~~~l~~~~~ 295 (403)
T 3ot5_A 237 LGEPMQGMFEAVREIVESREDTE----LVYPMHLN----P---AVREKAMAIL-------GG--H-ERIHLIEPLDAIDF 295 (403)
T ss_dssp HTTHHHHHHHHHHHHHHHCTTEE----EEEECCSC----H---HHHHHHHHHH-------TT--C-TTEEEECCCCHHHH
T ss_pred cCcHHHHHHHHHHHHHHhCCCce----EEEecCCC----H---HHHHHHHHHh-------CC--C-CCEEEeCCCCHHHH
Confidence 4789999999999999999864 55543321 2 2333333321 11 1 23456678889999
Q ss_pred HHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec-cCCCCcccC--CCceEeCCCCHHH
Q 002984 425 SAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-EFIGCSPSL--SGAIRVNPWDIDA 501 (861)
Q Consensus 425 ~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l--~~ai~vnP~d~~~ 501 (861)
..+|+.||++|.+| | | +..||++|+ -|+|++ ..++..+.+ ..+++|.+ |.++
T Consensus 296 ~~l~~~ad~vv~~S---G-g-~~~EA~a~g-------------------~PvV~~~~~~~~~e~v~~g~~~lv~~-d~~~ 350 (403)
T 3ot5_A 296 HNFLRKSYLVFTDS---G-G-VQEEAPGMG-------------------VPVLVLRDTTERPEGIEAGTLKLIGT-NKEN 350 (403)
T ss_dssp HHHHHHEEEEEECC---H-H-HHHHGGGTT-------------------CCEEECCSSCSCHHHHHHTSEEECCS-CHHH
T ss_pred HHHHHhcCEEEECC---c-c-HHHHHHHhC-------------------CCEEEecCCCcchhheeCCcEEEcCC-CHHH
Confidence 99999999998888 2 3 338999994 457777 444444444 34677766 9999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHhhhh
Q 002984 502 VADAMTLAINMRDSEKQLRHEKHYRY 527 (861)
Q Consensus 502 ~A~ai~~aL~m~~~e~~~r~~~~~~~ 527 (861)
++++|.++|+. ++.++.+.+....|
T Consensus 351 l~~ai~~ll~~-~~~~~~m~~~~~~~ 375 (403)
T 3ot5_A 351 LIKEALDLLDN-KESHDKMAQAANPY 375 (403)
T ss_dssp HHHHHHHHHHC-HHHHHHHHHSCCTT
T ss_pred HHHHHHHHHcC-HHHHHHHHhhcCcc
Confidence 99999999973 33333333333444
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.20 E-value=5.9e-11 Score=117.27 Aligned_cols=69 Identities=13% Similarity=0.105 Sum_probs=56.4
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecCC--Hh
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLDD--AT 830 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~d--~~ 830 (861)
+|+.+++.+++++ |++++++++|||+.||++|++.+|. +++|+++ +..|+|++.+ .+
T Consensus 83 ~K~~~l~~~~~~~---gi~~~~~~~vGD~~nDi~~~~~ag~--------------~~a~~na~~~~k~~Ad~v~~~~~~~ 145 (168)
T 3ewi_A 83 DKLATVDEWRKEM---GLCWKEVAYLGNEVSDEECLKRVGL--------------SAVPADACSGAQKAVGYICKCSGGR 145 (168)
T ss_dssp CHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHHHSSE--------------EEECTTCCHHHHTTCSEECSSCTTT
T ss_pred ChHHHHHHHHHHc---CcChHHEEEEeCCHhHHHHHHHCCC--------------EEEeCChhHHHHHhCCEEeCCCCCc
Confidence 4999999999999 9999999999999999999999996 6788876 4788898864 34
Q ss_pred H-HHHHHHHHHhh
Q 002984 831 D-VLKLLQGLATA 842 (861)
Q Consensus 831 e-V~~~L~~L~~~ 842 (861)
+ +.++++.+...
T Consensus 146 G~~~~~~~~il~~ 158 (168)
T 3ewi_A 146 GAIREFAEHIFLL 158 (168)
T ss_dssp THHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHh
Confidence 4 44566655543
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.19 E-value=8.8e-11 Score=120.83 Aligned_cols=73 Identities=15% Similarity=0.067 Sum_probs=61.5
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCC-eEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC-cccceecCCHh
Q 002984 753 PQGVSKGLVAEKVLVRMFNGGRPPD-FVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP-SKAKYYLDDAT 830 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~d-~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-s~Aky~l~d~~ 830 (861)
..+..|+.+++.+++++ |++++ ++++|||+.||+.|++.+|.. +|.+|+.. ..+.+.+++..
T Consensus 156 ~~~Kp~~~~~~~~~~~l---gi~~~~~~v~vGD~~~Di~~a~~aG~~-------------~v~~~~~~~~~~~~~~~~~~ 219 (231)
T 3kzx_A 156 GTIKPSPEPVLAALTNI---NIEPSKEVFFIGDSISDIQSAIEAGCL-------------PIKYGSTNIIKDILSFKNFY 219 (231)
T ss_dssp SCCTTSSHHHHHHHHHH---TCCCSTTEEEEESSHHHHHHHHHTTCE-------------EEEECC-----CCEEESSHH
T ss_pred CCCCCChHHHHHHHHHc---CCCcccCEEEEcCCHHHHHHHHHCCCe-------------EEEECCCCCCCCceeeCCHH
Confidence 44566789999999999 99999 999999999999999999963 77888765 48889999999
Q ss_pred HHHHHHHHHHh
Q 002984 831 DVLKLLQGLAT 841 (861)
Q Consensus 831 eV~~~L~~L~~ 841 (861)
++.++|.++.+
T Consensus 220 el~~~l~~~l~ 230 (231)
T 3kzx_A 220 DIRNFICQLIN 230 (231)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999998865
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=9.6e-11 Score=117.87 Aligned_cols=144 Identities=19% Similarity=0.198 Sum_probs=104.8
Q ss_pred HHhccceEEEecCCccccCCCC---CCC----CCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecC
Q 002984 586 YRKTERRAIFLDYDGTVVPETS---IIK----SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEH 658 (861)
Q Consensus 586 y~~s~~klI~~DlDGTLl~~~~---~~~----~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaen 658 (861)
++..++|+|+||+||||++... ... ........+|+.| ++.|+.++|+||++...+..++..+ ++..
T Consensus 21 ~~~~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L-~~~g~~v~ivT~~~~~~~~~~l~~l---gl~~-- 94 (188)
T 2r8e_A 21 AKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCA-LTSDIEVAIITGRKAKLVEDRCATL---GITH-- 94 (188)
T ss_dssp HHHHTCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHH-HTTTCEEEEECSSCCHHHHHHHHHH---TCCE--
T ss_pred HHHhcCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHH-HHCCCeEEEEeCCChHHHHHHHHHc---CCce--
Confidence 3556789999999999998210 011 1223334578888 7889999999999999888887533 2210
Q ss_pred cEEEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCC
Q 002984 659 GYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANE 738 (861)
Q Consensus 659 G~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~ 738 (861)
++
T Consensus 95 -~~----------------------------------------------------------------------------- 96 (188)
T 2r8e_A 95 -LY----------------------------------------------------------------------------- 96 (188)
T ss_dssp -EE-----------------------------------------------------------------------------
T ss_pred -ee-----------------------------------------------------------------------------
Confidence 00
Q ss_pred CEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC
Q 002984 739 PAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK 818 (861)
Q Consensus 739 ~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 818 (861)
+.+.+|+.+++++++++ |++++++++|||+.||++|++.+|. ++++++.
T Consensus 97 --------------~~~kpk~~~~~~~~~~~---g~~~~~~~~iGD~~~Di~~a~~ag~--------------~~~~~~~ 145 (188)
T 2r8e_A 97 --------------QGQSNKLIAFSDLLEKL---AIAPENVAYVGDDLIDWPVMEKVGL--------------SVAVADA 145 (188)
T ss_dssp --------------CSCSCSHHHHHHHHHHH---TCCGGGEEEEESSGGGHHHHTTSSE--------------EEECTTS
T ss_pred --------------cCCCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCC--------------EEEecCc
Confidence 01345899999999999 9999999999999999999999986 4566653
Q ss_pred ----CcccceecCCH--hHHH-HHHHHHHhhcC
Q 002984 819 ----PSKAKYYLDDA--TDVL-KLLQGLATASS 844 (861)
Q Consensus 819 ----~s~Aky~l~d~--~eV~-~~L~~L~~~~~ 844 (861)
...|+|+++++ .+++ ++++.+.....
T Consensus 146 ~~~~~~~ad~v~~~~~~~g~~~~~l~~ll~~~~ 178 (188)
T 2r8e_A 146 HPLLIPRADYVTRIAGGRGAVREVCDLLLLAQG 178 (188)
T ss_dssp CTTTGGGSSEECSSCTTTTHHHHHHHHHHHHTT
T ss_pred CHHHHhcCCEEEeCCCCCcHHHHHHHHHHHhcC
Confidence 35688988764 4455 88888776544
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.17 E-value=8.6e-12 Score=127.75 Aligned_cols=78 Identities=15% Similarity=0.093 Sum_probs=65.5
Q ss_pred EEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------Ccccc
Q 002984 750 EVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAK 823 (861)
Q Consensus 750 EI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Ak 823 (861)
+..+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. +++|++|+. +..|+
T Consensus 136 ~~~~~~kp~~~~~~~~~~~l---gi~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad 201 (226)
T 3mc1_A 136 SLDGKLSTKEDVIRYAMESL---NIKSDDAIMIGDREYDVIGALKNNLP-----------SIGVTYGFGSYEELKNAGAN 201 (226)
T ss_dssp CTTSSSCSHHHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHTTTCC-----------EEEESSSSSCHHHHHHHTCS
T ss_pred CCCCCCCCCHHHHHHHHHHh---CcCcccEEEECCCHHHHHHHHHCCCC-----------EEEEccCCCCHHHHHHcCCC
Confidence 34567888999999999999 99999999999999999999999973 467777764 26789
Q ss_pred eecCCHhHHHHHHHHHHh
Q 002984 824 YYLDDATDVLKLLQGLAT 841 (861)
Q Consensus 824 y~l~d~~eV~~~L~~L~~ 841 (861)
|++++.+++.++|.....
T Consensus 202 ~v~~s~~el~~~~~~~~~ 219 (226)
T 3mc1_A 202 YIVNSVDELHKKILELRE 219 (226)
T ss_dssp EEESSHHHHHHHHHTC--
T ss_pred EEECCHHHHHHHHHHHhc
Confidence 999999999988875543
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=4.1e-11 Score=117.39 Aligned_cols=137 Identities=15% Similarity=0.110 Sum_probs=98.6
Q ss_pred ccceEEEecCCccccCCCC---CCC----CCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEE
Q 002984 589 TERRAIFLDYDGTVVPETS---IIK----SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYF 661 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~---~~~----~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (861)
.++|+|+||+||||++... ... ........+|+.| ++.|+.++|+||++...+...+..+.-..+...
T Consensus 2 ~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~---- 76 (164)
T 3e8m_A 2 KEIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWA-HNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQG---- 76 (164)
T ss_dssp CCCCEEEECSTTTTSSSEEEECSSSCEEEEEEGGGHHHHHHH-HHTTCCEEEECSSCCHHHHHHHHHTTCSEEECS----
T ss_pred CcceEEEEcCCCceEcCcEEEcCCCcEEEEecCChHHHHHHH-HHCCCEEEEEeCCChHHHHHHHHHcCCCEeecc----
Confidence 3579999999999998320 011 1111222357777 678999999999999988888754321111100
Q ss_pred EEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEE
Q 002984 662 IRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAV 741 (861)
Q Consensus 662 i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 741 (861)
T Consensus 77 -------------------------------------------------------------------------------- 76 (164)
T 3e8m_A 77 -------------------------------------------------------------------------------- 76 (164)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---
Q 002984 742 VKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK--- 818 (861)
Q Consensus 742 v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 818 (861)
...|+.+++.+++++ |++++++++|||+.||++|++.+|. ++.+++.
T Consensus 77 -------------~kpk~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag~--------------~~~~~~~~~~ 126 (164)
T 3e8m_A 77 -------------VVDKLSAAEELCNEL---GINLEQVAYIGDDLNDAKLLKRVGI--------------AGVPASAPFY 126 (164)
T ss_dssp -------------CSCHHHHHHHHHHHH---TCCGGGEEEECCSGGGHHHHTTSSE--------------EECCTTSCHH
T ss_pred -------------cCChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCC--------------eEEcCChHHH
Confidence 135999999999999 9999999999999999999999986 5666664
Q ss_pred -CcccceecCCH--hH-HHHHHHHHH
Q 002984 819 -PSKAKYYLDDA--TD-VLKLLQGLA 840 (861)
Q Consensus 819 -~s~Aky~l~d~--~e-V~~~L~~L~ 840 (861)
...|+|++.+. .+ +.++++.+.
T Consensus 127 ~~~~ad~v~~~~~~~g~~~e~~~~ll 152 (164)
T 3e8m_A 127 IRRLSTIFLEKRGGEGVFREFVEKVL 152 (164)
T ss_dssp HHTTCSSCCCCCTTTTHHHHHHHHHT
T ss_pred HHHhCcEEeccCCCCcHHHHHHHHHH
Confidence 36788888653 33 677777665
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.15 E-value=6.8e-11 Score=119.42 Aligned_cols=125 Identities=18% Similarity=0.179 Sum_probs=91.7
Q ss_pred ccceEEEecCCccccCCCCC-------CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEE
Q 002984 589 TERRAIFLDYDGTVVPETSI-------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYF 661 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~-------~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (861)
..+|+++||+||||++.... -+.....--.+|+.| ++.|+.++|+||++...+...+..+ ++..
T Consensus 17 ~~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L-~~~g~~~~ivTn~~~~~~~~~l~~l---gl~~----- 87 (191)
T 3n1u_A 17 KKIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLL-MAAGIQVAIITTAQNAVVDHRMEQL---GITH----- 87 (191)
T ss_dssp HTCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHH-HHTTCEEEEECSCCSHHHHHHHHHH---TCCE-----
T ss_pred hcCCEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHH-HHCCCeEEEEeCcChHHHHHHHHHc---CCcc-----
Confidence 46899999999999982210 011122222248888 6889999999999988888777432 2110
Q ss_pred EEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEE
Q 002984 662 IRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAV 741 (861)
Q Consensus 662 i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 741 (861)
...+.
T Consensus 88 -~~~~~-------------------------------------------------------------------------- 92 (191)
T 3n1u_A 88 -YYKGQ-------------------------------------------------------------------------- 92 (191)
T ss_dssp -EECSC--------------------------------------------------------------------------
T ss_pred -ceeCC--------------------------------------------------------------------------
Confidence 00000
Q ss_pred EEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC--
Q 002984 742 VKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP-- 819 (861)
Q Consensus 742 v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-- 819 (861)
.+|+.+++.+++++ |++++++++|||+.||++|++.+|. +++++++.
T Consensus 93 --------------kpk~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag~--------------~~~~~~~~~~ 141 (191)
T 3n1u_A 93 --------------VDKRSAYQHLKKTL---GLNDDEFAYIGDDLPDLPLIQQVGL--------------GVAVSNAVPQ 141 (191)
T ss_dssp --------------SSCHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTCCHH
T ss_pred --------------CChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCC--------------EEEeCCccHH
Confidence 35899999999999 9999999999999999999999996 56787753
Q ss_pred --cccceecCC
Q 002984 820 --SKAKYYLDD 828 (861)
Q Consensus 820 --s~Aky~l~d 828 (861)
..|+|++.+
T Consensus 142 ~~~~ad~v~~~ 152 (191)
T 3n1u_A 142 VLEFADWRTER 152 (191)
T ss_dssp HHHHSSEECSS
T ss_pred HHHhCCEEecC
Confidence 578898865
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.15 E-value=1e-10 Score=117.92 Aligned_cols=56 Identities=20% Similarity=0.174 Sum_probs=49.3
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccceecCC
Q 002984 756 VSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDD 828 (861)
Q Consensus 756 vsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d 828 (861)
.+|+.+++.+++++ |++++++++|||+.||++|++.+|. ++++|+.. ..|+|++.+
T Consensus 93 ~~K~~~~~~~~~~~---g~~~~~~~~vGD~~nDi~~~~~ag~--------------~~~~~~~~~~~~~~ad~v~~~ 152 (189)
T 3mn1_A 93 EDKLVVLDKLLAEL---QLGYEQVAYLGDDLPDLPVIRRVGL--------------GMAVANAASFVREHAHGITRA 152 (189)
T ss_dssp SCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHHTSSEECSS
T ss_pred CChHHHHHHHHHHc---CCChhHEEEECCCHHHHHHHHHCCC--------------eEEeCCccHHHHHhCCEEecC
Confidence 46999999999999 9999999999999999999999985 67787753 568888876
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=2.2e-10 Score=124.15 Aligned_cols=72 Identities=18% Similarity=0.155 Sum_probs=55.8
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCCCC-----------
Q 002984 752 KPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----------- 819 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----------- 819 (861)
...+..|+.+++.+++++ |++++++++|||+. ||+.|.+.+|.. ++.|..|...
T Consensus 211 ~~~~KP~~~~~~~~~~~l---gi~~~e~l~vGD~~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~ 276 (306)
T 2oyc_A 211 LVVGKPSPYMFECITENF---SIDPARTLMVGDRLETDILFGHRCGMT-----------TVLTLTGVSRLEEAQAYLAAG 276 (306)
T ss_dssp EECSTTSTHHHHHHHHHS---CCCGGGEEEEESCTTTHHHHHHHHTCE-----------EEEESSSSCCHHHHHHHHHTT
T ss_pred eeeCCCCHHHHHHHHHHc---CCChHHEEEECCCchHHHHHHHHCCCe-----------EEEECCCCCCHHHHHhhhccc
Confidence 345677889999999999 99999999999995 999999999973 2344445321
Q ss_pred ---cccceecCCHhHHHHHHH
Q 002984 820 ---SKAKYYLDDATDVLKLLQ 837 (861)
Q Consensus 820 ---s~Aky~l~d~~eV~~~L~ 837 (861)
..++|++++..++.++|+
T Consensus 277 ~~~~~pd~vi~~l~el~~~l~ 297 (306)
T 2oyc_A 277 QHDLVPHYYVESIADLTEGLE 297 (306)
T ss_dssp CGGGSCSEEESSGGGGGGGC-
T ss_pred ccCCCCCEEECCHHHHHHHHH
Confidence 357788888888766554
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.14 E-value=1.4e-10 Score=121.56 Aligned_cols=71 Identities=15% Similarity=0.132 Sum_probs=57.9
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCC-C-------Ccccce
Q 002984 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGR-K-------PSKAKY 824 (861)
Q Consensus 754 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~-------~s~Aky 824 (861)
.+..|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|..|. . ...+++
T Consensus 177 ~~Kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~ 242 (259)
T 2ho4_A 177 VGKPEKTFFLEALRDA---DCAPEEAVMIGDDCRDDVDGAQNIGML-----------GILVKTGKYKAADEEKINPPPYL 242 (259)
T ss_dssp CSTTSHHHHHHHGGGG---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEESSTTCCTTGGGGSSSCCSE
T ss_pred ecCCCHHHHHHHHHHc---CCChHHEEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCcccccccCCCCCE
Confidence 4557899999999999 99999999999998 999999999973 34555562 1 245788
Q ss_pred ecCCHhHHHHHHHH
Q 002984 825 YLDDATDVLKLLQG 838 (861)
Q Consensus 825 ~l~d~~eV~~~L~~ 838 (861)
++++..++.++|..
T Consensus 243 ~~~~l~~l~~~l~~ 256 (259)
T 2ho4_A 243 TCESFPHAVDHILQ 256 (259)
T ss_dssp EESCHHHHHHHHHH
T ss_pred EECCHHHHHHHHHH
Confidence 99999999887754
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.12 E-value=4e-11 Score=123.79 Aligned_cols=73 Identities=19% Similarity=0.250 Sum_probs=63.4
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC------ccccee
Q 002984 752 KPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP------SKAKYY 825 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------s~Aky~ 825 (861)
.+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. +++|++|+.. ..|+|+
T Consensus 156 ~~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad~v 221 (237)
T 4ex6_A 156 VERGKPHPDMALHVARGL---GIPPERCVVIGDGVPDAEMGRAAGMT-----------VIGVSYGVSGPDELMRAGADTV 221 (237)
T ss_dssp SSSCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEESSSSSCHHHHHHTTCSEE
T ss_pred CCCCCCCHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEEecCCCCHHHHHhcCCCEE
Confidence 566788999999999999 99999999999999999999999973 4677777532 479999
Q ss_pred cCCHhHHHHHHHH
Q 002984 826 LDDATDVLKLLQG 838 (861)
Q Consensus 826 l~d~~eV~~~L~~ 838 (861)
+++..++.++|+.
T Consensus 222 ~~~~~el~~~l~~ 234 (237)
T 4ex6_A 222 VDSFPAAVTAVLD 234 (237)
T ss_dssp ESSHHHHHHHHHH
T ss_pred ECCHHHHHHHHHc
Confidence 9999999998864
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.12 E-value=8.7e-11 Score=119.05 Aligned_cols=141 Identities=17% Similarity=0.165 Sum_probs=100.3
Q ss_pred hccceEEEecCCccccCCCCC-------CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcE
Q 002984 588 KTERRAIFLDYDGTVVPETSI-------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660 (861)
Q Consensus 588 ~s~~klI~~DlDGTLl~~~~~-------~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~ 660 (861)
..++|+|+||+||||++.... -+.........|+.| ++.|+.++|+||++...+..++..+ ++..
T Consensus 22 ~~~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L-~~~G~~~~ivT~~~~~~~~~~l~~l---gi~~---- 93 (195)
T 3n07_A 22 AKQIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKAL-MNAGIEIAIITGRRSQIVENRMKAL---GISL---- 93 (195)
T ss_dssp HHTCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHH-HHTTCEEEEECSSCCHHHHHHHHHT---TCCE----
T ss_pred HhCCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHH-HHCCCEEEEEECcCHHHHHHHHHHc---CCcE----
Confidence 346899999999999982210 112223333458888 7889999999999988888777432 2100
Q ss_pred EEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCE
Q 002984 661 FIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPA 740 (861)
Q Consensus 661 ~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~ 740 (861)
. +.
T Consensus 94 --------~------------------------------------------~~--------------------------- 96 (195)
T 3n07_A 94 --------I------------------------------------------YQ--------------------------- 96 (195)
T ss_dssp --------E------------------------------------------EC---------------------------
T ss_pred --------E------------------------------------------ee---------------------------
Confidence 0 00
Q ss_pred EEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC-
Q 002984 741 VVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP- 819 (861)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~- 819 (861)
...+|+.+++.+++++ |++++++++|||+.||++|++.+|. +++++++.
T Consensus 97 -------------~~k~k~~~~~~~~~~~---~~~~~~~~~vGD~~nDi~~~~~ag~--------------~va~~na~~ 146 (195)
T 3n07_A 97 -------------GQDDKVQAYYDICQKL---AIAPEQTGYIGDDLIDWPVMEKVAL--------------RVCVADGHP 146 (195)
T ss_dssp -------------SCSSHHHHHHHHHHHH---CCCGGGEEEEESSGGGHHHHTTSSE--------------EEECTTSCH
T ss_pred -------------CCCCcHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHCCC--------------EEEECChHH
Confidence 0035999999999999 9999999999999999999999985 67888763
Q ss_pred ---cccceecCC--HhH-HHHHHHHHHhhc
Q 002984 820 ---SKAKYYLDD--ATD-VLKLLQGLATAS 843 (861)
Q Consensus 820 ---s~Aky~l~d--~~e-V~~~L~~L~~~~ 843 (861)
..|+|++.+ .++ +.++++.+....
T Consensus 147 ~~~~~ad~v~~~~~~~G~~~~~~~~il~~~ 176 (195)
T 3n07_A 147 LLAQRANYVTHIKGGHGAVREVCDLILQAR 176 (195)
T ss_dssp HHHHHCSEECSSCTTTTHHHHHHHHHHHHT
T ss_pred HHHHhCCEEEcCCCCCCHHHHHHHHHHHhc
Confidence 578888864 344 345555555543
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.12 E-value=4.2e-11 Score=123.12 Aligned_cols=75 Identities=17% Similarity=0.160 Sum_probs=62.8
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccceecC
Q 002984 753 PQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLD 827 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~ 827 (861)
..+..|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|+.|+.. ..|+|+++
T Consensus 152 ~~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~a~~~~~ 217 (234)
T 3u26_A 152 GFFKPHPRIFELALKKA---GVKGEEAVYVGDNPVKDCGGSKNLGMT-----------SILLDRKGEKREFWDKCDFIVS 217 (234)
T ss_dssp TBCTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHTTTCE-----------EEEECSSSTTGGGGGGCSEEES
T ss_pred CCCCcCHHHHHHHHHHc---CCCchhEEEEcCCcHHHHHHHHHcCCE-----------EEEECCCCCccccccCCCEeeC
Confidence 34555788899999999 99999999999997 999999999973 4567777643 37899999
Q ss_pred CHhHHHHHHHHHHh
Q 002984 828 DATDVLKLLQGLAT 841 (861)
Q Consensus 828 d~~eV~~~L~~L~~ 841 (861)
+..++.++|+.+..
T Consensus 218 ~~~el~~~l~~~~~ 231 (234)
T 3u26_A 218 DLREVIKIVDELNG 231 (234)
T ss_dssp STHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHhh
Confidence 99999999988743
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=8e-11 Score=118.81 Aligned_cols=65 Identities=25% Similarity=0.295 Sum_probs=54.4
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---CcccceecCC--
Q 002984 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK---PSKAKYYLDD-- 828 (861)
Q Consensus 754 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~Aky~l~d-- 828 (861)
.+.+|+.++..+++++ |++++++++|||+.||++|++.+|. +|+++.. +..|+|++++
T Consensus 140 ~~~~K~~~l~~~~~~l---gi~~~~~~~iGD~~~Di~~~~~ag~--------------~~~~~~~~~~~~~a~~v~~~~~ 202 (211)
T 1l7m_A 140 KENAKGEILEKIAKIE---GINLEDTVAVGDGANDISMFKKAGL--------------KIAFCAKPILKEKADICIEKRD 202 (211)
T ss_dssp STTHHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCSE--------------EEEESCCHHHHTTCSEEECSSC
T ss_pred CCccHHHHHHHHHHHc---CCCHHHEEEEecChhHHHHHHHCCC--------------EEEECCCHHHHhhcceeecchh
Confidence 4778999999999999 9999999999999999999999996 4566633 3568888876
Q ss_pred HhHHHHH
Q 002984 829 ATDVLKL 835 (861)
Q Consensus 829 ~~eV~~~ 835 (861)
..++..+
T Consensus 203 ~~~l~~~ 209 (211)
T 1l7m_A 203 LREILKY 209 (211)
T ss_dssp GGGGGGG
T ss_pred HHHHHHh
Confidence 7776544
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.08 E-value=3.2e-10 Score=112.44 Aligned_cols=67 Identities=15% Similarity=0.036 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC--------CcccceecCCH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK--------PSKAKYYLDDA 829 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------~s~Aky~l~d~ 829 (861)
+...++++++++ |++++++++|||+.||+.|.+.+|.. ++.|.+|.. ...|+|++++.
T Consensus 103 ~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~d~v~~~l 168 (179)
T 3l8h_A 103 LPGMYRDIARRY---DVDLAGVPAVGDSLRDLQAAAQAGCA-----------PWLVQTGNGRKTLAQGGLPEGTRVCEDL 168 (179)
T ss_dssp SSHHHHHHHHHH---TCCCTTCEEEESSHHHHHHHHHHTCE-----------EEEESTTTHHHHHHHCCCCTTEEEESSH
T ss_pred CHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCc-----------EEEECCCCcchhhhhcccCCCcEEecCH
Confidence 566889999999 99999999999999999999999973 456666753 25679999999
Q ss_pred hHHHHHHHH
Q 002984 830 TDVLKLLQG 838 (861)
Q Consensus 830 ~eV~~~L~~ 838 (861)
.|+.++|..
T Consensus 169 ~el~~~l~~ 177 (179)
T 3l8h_A 169 AAVAEQLLQ 177 (179)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988754
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.05 E-value=6.7e-10 Score=113.92 Aligned_cols=71 Identities=20% Similarity=0.195 Sum_probs=56.7
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecCCH--
Q 002984 756 VSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLDDA-- 829 (861)
Q Consensus 756 vsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~d~-- 829 (861)
.+|+.+++.+++++ |++++++++|||+.||++|++.+|. +++++++ ...|+|++.+.
T Consensus 123 k~K~~~l~~~~~~l---g~~~~~~~~vGDs~nDi~~~~~ag~--------------~~a~~~~~~~~~~~Ad~v~~~~~~ 185 (211)
T 3ij5_A 123 SDKLVAYHELLATL---QCQPEQVAYIGDDLIDWPVMAQVGL--------------SVAVADAHPLLLPKAHYVTRIKGG 185 (211)
T ss_dssp SSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHTTSSE--------------EEECTTSCTTTGGGSSEECSSCTT
T ss_pred CChHHHHHHHHHHc---CcCcceEEEEcCCHHHHHHHHHCCC--------------EEEeCCccHHHHhhCCEEEeCCCC
Confidence 35999999999999 9999999999999999999999985 6777764 35688888654
Q ss_pred h-HHHHHHHHHHhhc
Q 002984 830 T-DVLKLLQGLATAS 843 (861)
Q Consensus 830 ~-eV~~~L~~L~~~~ 843 (861)
+ .+.++++.+....
T Consensus 186 ~G~v~e~~~~ll~~~ 200 (211)
T 3ij5_A 186 RGAVREVCDLILLAQ 200 (211)
T ss_dssp TTHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHc
Confidence 2 2566666665543
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.03 E-value=5.1e-10 Score=113.25 Aligned_cols=76 Identities=13% Similarity=0.076 Sum_probs=60.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC--CC----C
Q 002984 746 QHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG--RK----P 819 (861)
Q Consensus 746 ~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG--~~----~ 819 (861)
..+.++.+.+.+|+..++.+++.+ |++++++++|||+.||++|++ +|.. .+++.+| +. +
T Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~vGD~~~Di~~~~-~G~~-----------~~~v~~~~~~~~~~~~ 201 (219)
T 3kd3_A 137 GSFKELDNSNGACDSKLSAFDKAK---GLIDGEVIAIGDGYTDYQLYE-KGYA-----------TKFIAYMEHIEREKVI 201 (219)
T ss_dssp SBEEEEECTTSTTTCHHHHHHHHG---GGCCSEEEEEESSHHHHHHHH-HTSC-----------SEEEEECSSCCCHHHH
T ss_pred CceeccCCCCCCcccHHHHHHHHh---CCCCCCEEEEECCHhHHHHHh-CCCC-----------cEEEeccCccccHHHH
Confidence 345677888899999999999998 999999999999999999995 5542 1345554 33 2
Q ss_pred cccceecCCHhHHHHHH
Q 002984 820 SKAKYYLDDATDVLKLL 836 (861)
Q Consensus 820 s~Aky~l~d~~eV~~~L 836 (861)
..|+|++++.+++.++|
T Consensus 202 ~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 202 NLSKYVARNVAELASLI 218 (219)
T ss_dssp HHCSEEESSHHHHHHHH
T ss_pred hhcceeeCCHHHHHHhh
Confidence 56899999999998775
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.01 E-value=7.6e-10 Score=113.64 Aligned_cols=71 Identities=15% Similarity=0.210 Sum_probs=59.1
Q ss_pred CHHHHHHHHHHHhhcCC--CCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC------cccceecCC
Q 002984 757 SKGLVAEKVLVRMFNGG--RPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP------SKAKYYLDD 828 (861)
Q Consensus 757 sKg~al~~ll~~l~~~g--i~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------s~Aky~l~d 828 (861)
.+..+++.+++++ | ++++++++|||+.||+.|++.+|.. +++|++|+.. ..|+|++++
T Consensus 152 ~~~~~~~~~~~~l---g~~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~~~~~~a~~v~~~ 217 (234)
T 2hcf_A 152 LPHIALERARRMT---GANYSPSQIVIIGDTEHDIRCARELDAR-----------SIAVATGNFTMEELARHKPGTLFKN 217 (234)
T ss_dssp HHHHHHHHHHHHH---CCCCCGGGEEEEESSHHHHHHHHTTTCE-----------EEEECCSSSCHHHHHTTCCSEEESC
T ss_pred hHHHHHHHHHHHh---CCCCCcccEEEECCCHHHHHHHHHCCCc-----------EEEEcCCCCCHHHHHhCCCCEEeCC
Confidence 3567889999999 9 8999999999999999999999973 3566666532 238899999
Q ss_pred HhHHHHHHHHHHh
Q 002984 829 ATDVLKLLQGLAT 841 (861)
Q Consensus 829 ~~eV~~~L~~L~~ 841 (861)
.+++.++|+.+..
T Consensus 218 ~~el~~~l~~~~~ 230 (234)
T 2hcf_A 218 FAETDEVLASILT 230 (234)
T ss_dssp SCCHHHHHHHHHC
T ss_pred HHhHHHHHHHHhc
Confidence 9999999998874
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=4.8e-10 Score=113.40 Aligned_cols=69 Identities=19% Similarity=0.123 Sum_probs=59.1
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecCCH
Q 002984 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLDDA 829 (861)
Q Consensus 754 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~d~ 829 (861)
.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. +|.|+++ +..|+|++++.
T Consensus 125 ~~kp~~~~~~~~~~~~---g~~~~~~i~iGD~~~Di~~a~~aG~~-------------~i~v~~~~~~~~~~ad~v~~~~ 188 (205)
T 3m9l_A 125 PPKPHPGGLLKLAEAW---DVSPSRMVMVGDYRFDLDCGRAAGTR-------------TVLVNLPDNPWPELTDWHARDC 188 (205)
T ss_dssp CCTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEECSSSSCSCGGGCSEECSSH
T ss_pred CCCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCCE-------------EEEEeCCCCcccccCCEEeCCH
Confidence 4555788999999999 99999999999999999999999972 6777764 35689999999
Q ss_pred hHHHHHHHH
Q 002984 830 TDVLKLLQG 838 (861)
Q Consensus 830 ~eV~~~L~~ 838 (861)
+|+.+.|+.
T Consensus 189 ~el~~~~~~ 197 (205)
T 3m9l_A 189 AQLRDLLSA 197 (205)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999888765
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.1e-11 Score=125.21 Aligned_cols=73 Identities=12% Similarity=0.006 Sum_probs=59.9
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecC
Q 002984 753 PQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLD 827 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~ 827 (861)
+.+..|+.+++.+++++ |++++++++|||+. ||+.|.+.+|.. ++.|..|.. ...|+|+++
T Consensus 152 ~~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~~~~~~~ 217 (230)
T 3vay_A 152 GIGKPDPAPFLEALRRA---KVDASAAVHVGDHPSDDIAGAQQAGMR-----------AIWYNPQGKAWDADRLPDAEIH 217 (230)
T ss_dssp TCCTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECTTCCCCCSSSCCSEEES
T ss_pred CCCCcCHHHHHHHHHHh---CCCchheEEEeCChHHHHHHHHHCCCE-----------EEEEcCCCCCCcccCCCCeeEC
Confidence 44566799999999999 99999999999997 999999999974 234444432 357889999
Q ss_pred CHhHHHHHHHHH
Q 002984 828 DATDVLKLLQGL 839 (861)
Q Consensus 828 d~~eV~~~L~~L 839 (861)
+..++.++|+++
T Consensus 218 ~l~el~~~l~~~ 229 (230)
T 3vay_A 218 NLSQLPEVLARW 229 (230)
T ss_dssp SGGGHHHHHHTT
T ss_pred CHHHHHHHHHhh
Confidence 999999998764
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.99 E-value=4.1e-10 Score=117.02 Aligned_cols=74 Identities=9% Similarity=-0.011 Sum_probs=61.9
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC------cccceec
Q 002984 753 PQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP------SKAKYYL 826 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------s~Aky~l 826 (861)
..+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|... ..|+|++
T Consensus 163 ~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~ad~v~ 228 (243)
T 3qxg_A 163 KYGKPNPEPYLMALKKG---GLKADEAVVIENAPLGVEAGHKAGIF-----------TIAVNTGPLDGQVLLDAGADLLF 228 (243)
T ss_dssp SSCTTSSHHHHHHHHHT---TCCGGGEEEEECSHHHHHHHHHTTCE-----------EEEECCSSSCHHHHHHTTCSEEE
T ss_pred CCCCCChHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCCE-----------EEEEeCCCCCHHHHHhcCCCEEE
Confidence 56677899999999999 99999999999999999999999973 2344444332 3699999
Q ss_pred CCHhHHHHHHHHHH
Q 002984 827 DDATDVLKLLQGLA 840 (861)
Q Consensus 827 ~d~~eV~~~L~~L~ 840 (861)
++..++.++|+.|.
T Consensus 229 ~s~~el~~~l~~li 242 (243)
T 3qxg_A 229 PSMQTLCDSWDTIM 242 (243)
T ss_dssp SCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhhh
Confidence 99999999999873
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.99 E-value=6.7e-11 Score=124.73 Aligned_cols=77 Identities=16% Similarity=0.217 Sum_probs=64.9
Q ss_pred EecCCCCHHHHHHHHHHHhhcCCCCC-CeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----------
Q 002984 751 VKPQGVSKGLVAEKVLVRMFNGGRPP-DFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP---------- 819 (861)
Q Consensus 751 I~p~gvsKg~al~~ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~---------- 819 (861)
..+.+.+|+.+++.+++++ |+++ +++++|||+.||++|++.+|.. +++|++|+..
T Consensus 155 ~~~~~kp~~~~~~~~~~~l---gi~~~~~~i~iGD~~nDi~~a~~aG~~-----------~i~v~~~~~~~~~~~~~~~~ 220 (267)
T 1swv_A 155 DVPAGRPYPWMCYKNAMEL---GVYPMNHMIKVGDTVSDMKEGRNAGMW-----------TVGVILGSSELGLTEEEVEN 220 (267)
T ss_dssp GSSCCTTSSHHHHHHHHHH---TCCSGGGEEEEESSHHHHHHHHHTTSE-----------EEEECTTCTTTCCCHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHh---CCCCCcCEEEEeCCHHHHHHHHHCCCE-----------EEEEcCCCCccCccHHHHhh
Confidence 3567788999999999999 9999 9999999999999999999973 3567777641
Q ss_pred -------------------cccceecCCHhHHHHHHHHHHh
Q 002984 820 -------------------SKAKYYLDDATDVLKLLQGLAT 841 (861)
Q Consensus 820 -------------------s~Aky~l~d~~eV~~~L~~L~~ 841 (861)
..|+|++++..++.++|+.+.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~~~ 261 (267)
T 1swv_A 221 MDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIEK 261 (267)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHHTC
T ss_pred chhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHHHHHHhh
Confidence 3489999999999999877643
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.98 E-value=5.9e-10 Score=115.48 Aligned_cols=78 Identities=14% Similarity=0.024 Sum_probs=65.5
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC------ccccee
Q 002984 752 KPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP------SKAKYY 825 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------s~Aky~ 825 (861)
.+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|... ..|+|+
T Consensus 161 ~~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~ad~v 226 (247)
T 3dv9_A 161 VKYGKPNPEPYLMALKKG---GFKPNEALVIENAPLGVQAGVAAGIF-----------TIAVNTGPLHDNVLLNEGANLL 226 (247)
T ss_dssp CSSCTTSSHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTSE-----------EEEECCSSSCHHHHHTTTCSEE
T ss_pred CCCCCCCCHHHHHHHHHc---CCChhheEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHHhcCCCEE
Confidence 356777899999999999 99999999999999999999999973 3455555432 379999
Q ss_pred cCCHhHHHHHHHHHHhhc
Q 002984 826 LDDATDVLKLLQGLATAS 843 (861)
Q Consensus 826 l~d~~eV~~~L~~L~~~~ 843 (861)
+++..++.++|+.+....
T Consensus 227 ~~~~~el~~~l~~~~~~~ 244 (247)
T 3dv9_A 227 FHSMPDFNKNWETLQSAL 244 (247)
T ss_dssp ESSHHHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHHh
Confidence 999999999999987653
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.97 E-value=6.3e-11 Score=120.55 Aligned_cols=76 Identities=11% Similarity=0.085 Sum_probs=53.3
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC-CC-C----cccceec
Q 002984 753 PQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG-RK-P----SKAKYYL 826 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~-~----s~Aky~l 826 (861)
+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.|..| +. + ..|+|++
T Consensus 142 ~~~k~~~~~~~~~~~~~---~~~~~~~i~iGD~~nDi~~~~~aG~~-----------~~~~~~~~~~~~~l~~~~ad~v~ 207 (225)
T 3d6j_A 142 THHKPDPEGLLLAIDRL---KACPEEVLYIGDSTVDAGTAAAAGVS-----------FTGVTSGMTTAQEFQAYPYDRII 207 (225)
T ss_dssp SSCTTSTHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEETTSSCCTTGGGGSCCSEEE
T ss_pred CCCCCChHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHCCCe-----------EEEECCCCCChHHHhhcCCCEEE
Confidence 45566889999999999 99999999999999999999999973 1222222 21 1 2388999
Q ss_pred CCHhHHHHHHHHHHhh
Q 002984 827 DDATDVLKLLQGLATA 842 (861)
Q Consensus 827 ~d~~eV~~~L~~L~~~ 842 (861)
++.+++.++|+.+.+.
T Consensus 208 ~~~~el~~~l~~~~~~ 223 (225)
T 3d6j_A 208 STLGQLISVPEDKSGC 223 (225)
T ss_dssp SSGGGGC---------
T ss_pred CCHHHHHHhhhhhcCC
Confidence 9999999999887654
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=1e-09 Score=112.46 Aligned_cols=70 Identities=11% Similarity=0.031 Sum_probs=56.5
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCce-EEEEeCCCC-----cccceecCC
Q 002984 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEI-FACTVGRKP-----SKAKYYLDD 828 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~-~av~vG~~~-----s~Aky~l~d 828 (861)
+-.|...++.+++++ |++++++++|||+.||+.|.+.+|.. + +.|..|... ..|+|++++
T Consensus 130 ~KP~p~~~~~~~~~l---gi~~~~~~~VGD~~~Di~~a~~aG~~-----------~~i~v~~g~~~~~~~~~~~d~vi~~ 195 (211)
T 2gmw_A 130 RKPHPGMLLSARDYL---HIDMAASYMVGDKLEDMQAAVAANVG-----------TKVLVRTGKPITPEAENAADWVLNS 195 (211)
T ss_dssp STTSCHHHHHHHHHH---TBCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEESSSSCCCHHHHHHCSEEESC
T ss_pred CCCCHHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCCCc-----------eEEEEecCCCccccccCCCCEEeCC
Confidence 334678899999999 99999999999999999999999973 3 455556432 358899999
Q ss_pred HhHHHHHHHH
Q 002984 829 ATDVLKLLQG 838 (861)
Q Consensus 829 ~~eV~~~L~~ 838 (861)
..++.++|..
T Consensus 196 l~el~~~l~~ 205 (211)
T 2gmw_A 196 LADLPQAIKK 205 (211)
T ss_dssp GGGHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 9999887754
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.96 E-value=4e-10 Score=115.29 Aligned_cols=74 Identities=14% Similarity=0.059 Sum_probs=62.5
Q ss_pred ecCC--CCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCc---------
Q 002984 752 KPQG--VSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPS--------- 820 (861)
Q Consensus 752 ~p~g--vsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s--------- 820 (861)
.+.+ .+|+.+++++++++ |++++++++|||+.||++|++.+|.. ++.+++...
T Consensus 137 ~~~~~~kpk~~~~~~~~~~l---~~~~~~~i~iGD~~~Di~~a~~aG~~-------------~i~~~~~~~~~~~~~~~l 200 (229)
T 2fdr_A 137 LGADRVKPKPDIFLHGAAQF---GVSPDRVVVVEDSVHGIHGARAAGMR-------------VIGFTGASHTYPSHADRL 200 (229)
T ss_dssp HCTTCCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-------------EEEECCSTTCCTTHHHHH
T ss_pred cccCCCCcCHHHHHHHHHHc---CCChhHeEEEcCCHHHHHHHHHCCCE-------------EEEEecCCccchhhhHHH
Confidence 4667 88999999999999 99999999999999999999999973 455554322
Q ss_pred ---ccceecCCHhHHHHHHHHHHh
Q 002984 821 ---KAKYYLDDATDVLKLLQGLAT 841 (861)
Q Consensus 821 ---~Aky~l~d~~eV~~~L~~L~~ 841 (861)
.|+|++++..++.++|+.+..
T Consensus 201 ~~~~ad~v~~~~~el~~~l~~~~~ 224 (229)
T 2fdr_A 201 TDAGAETVISRMQDLPAVIAAMAE 224 (229)
T ss_dssp HHHTCSEEESCGGGHHHHHHHHTC
T ss_pred hhcCCceeecCHHHHHHHHHHhhh
Confidence 289999999999999988743
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.96 E-value=4.7e-10 Score=113.96 Aligned_cols=69 Identities=9% Similarity=-0.006 Sum_probs=53.9
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC---cccceecCCHhH
Q 002984 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP---SKAKYYLDDATD 831 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~---s~Aky~l~d~~e 831 (861)
+..|+.+++.+++++ |++++++++|||+.||++|++.+|. ++.+++.+ ..|+|++++.++
T Consensus 144 ~Kp~~~~~~~~~~~l---gi~~~~~i~iGD~~nDi~~a~~aG~--------------~~~~~~~~~~~~~a~~v~~~~~e 206 (221)
T 2wf7_A 144 SKPAPDIFIAAAHAV---GVAPSESIGLEDSQAGIQAIKDSGA--------------LPIGVGRPEDLGDDIVIVPDTSH 206 (221)
T ss_dssp CTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTC--------------EEEEESCHHHHCSSSEEESSGGG
T ss_pred CCCChHHHHHHHHHc---CCChhHeEEEeCCHHHHHHHHHCCC--------------EEEEECCHHHhccccchhcCHHh
Confidence 344567999999999 9999999999999999999999997 34444431 278999988766
Q ss_pred --HHHHHHHHH
Q 002984 832 --VLKLLQGLA 840 (861)
Q Consensus 832 --V~~~L~~L~ 840 (861)
+..+++.+.
T Consensus 207 l~~~~~~~~~~ 217 (221)
T 2wf7_A 207 YTLEFLKEVWL 217 (221)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHh
Confidence 456666554
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.94 E-value=4.4e-10 Score=118.57 Aligned_cols=76 Identities=13% Similarity=0.055 Sum_probs=65.7
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCCCC-CeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------------
Q 002984 752 KPQGVSKGLVAEKVLVRMFNGGRPP-DFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------------ 818 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------ 818 (861)
.+.+..|+.+++.+++++ |+++ +++++|||+.||+.|++.+|.. ++.|++|..
T Consensus 164 ~~~~kp~~~~~~~~~~~l---gi~~~~~~i~vGD~~~Di~~a~~aG~~-----------~v~v~~g~~~~~~~~~~~~~~ 229 (277)
T 3iru_A 164 VVRGRPFPDMALKVALEL---EVGHVNGCIKVDDTLPGIEEGLRAGMW-----------TVGVSCSGNEVGLDREDWQAL 229 (277)
T ss_dssp SSSCTTSSHHHHHHHHHH---TCSCGGGEEEEESSHHHHHHHHHTTCE-----------EEEECSSSTTTCCCHHHHHHS
T ss_pred cCCCCCCHHHHHHHHHHc---CCCCCccEEEEcCCHHHHHHHHHCCCe-----------EEEEecCCcccccchhhhhhc
Confidence 567788999999999999 9999 9999999999999999999973 467777732
Q ss_pred -----------------CcccceecCCHhHHHHHHHHHHh
Q 002984 819 -----------------PSKAKYYLDDATDVLKLLQGLAT 841 (861)
Q Consensus 819 -----------------~s~Aky~l~d~~eV~~~L~~L~~ 841 (861)
...|+|++++..++.++|+.+..
T Consensus 230 ~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 269 (277)
T 3iru_A 230 SSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVITDVNR 269 (277)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHHHHHHH
T ss_pred chhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHHHHHHH
Confidence 24589999999999999988765
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.93 E-value=4.9e-10 Score=116.08 Aligned_cols=73 Identities=22% Similarity=0.218 Sum_probs=61.6
Q ss_pred EEecCCCCHHHHHHHHHHHhhcCCCC-CCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC------ccc
Q 002984 750 EVKPQGVSKGLVAEKVLVRMFNGGRP-PDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP------SKA 822 (861)
Q Consensus 750 EI~p~gvsKg~al~~ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------s~A 822 (861)
+..+.+..|+.+++.+++++ |++ ++++++|||+.||+.|++.+|.. ++.|++|+.. ..|
T Consensus 160 ~~~~~~kp~~~~~~~~~~~~---g~~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~a 225 (240)
T 3sd7_A 160 NLDGTRVNKNEVIQYVLDLC---NVKDKDKVIMVGDRKYDIIGAKKIGID-----------SIGVLYGYGSFEEISESEP 225 (240)
T ss_dssp CTTSCCCCHHHHHHHHHHHH---TCCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSSCCHHHHHHHCC
T ss_pred cccCCCCCCHHHHHHHHHHc---CCCCCCcEEEECCCHHHHHHHHHCCCC-----------EEEEeCCCCCHHHHhhcCC
Confidence 34466778999999999999 999 99999999999999999999973 3566666542 678
Q ss_pred ceecCCHhHHHHHH
Q 002984 823 KYYLDDATDVLKLL 836 (861)
Q Consensus 823 ky~l~d~~eV~~~L 836 (861)
++++++.+++.++|
T Consensus 226 d~v~~~~~el~~~l 239 (240)
T 3sd7_A 226 TYIVENVESIKDIL 239 (240)
T ss_dssp SEEESSSTTHHHHH
T ss_pred CEEECCHHHHHHHh
Confidence 89999999988776
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.89 E-value=9.5e-10 Score=111.83 Aligned_cols=66 Identities=11% Similarity=0.012 Sum_probs=52.1
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC-CC----CcccceecCCH
Q 002984 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG-RK----PSKAKYYLDDA 829 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~----~s~Aky~l~d~ 829 (861)
+.+|+.+++++++++ |++++++++|||+.||++|++.+|.+ ++.|..| ++ ...|+|++++.
T Consensus 149 ~kp~~~~~~~~~~~~---~i~~~~~i~iGD~~nDi~~a~~aG~~-----------~~~~~~~~~~~~~~~~~a~~v~~~~ 214 (226)
T 1te2_A 149 SKPHPQVYLDCAAKL---GVDPLTCVALEDSVNGMIASKAARMR-----------SIVVPAPEAQNDPRFVLANVKLSSL 214 (226)
T ss_dssp CTTSTHHHHHHHHHH---TSCGGGEEEEESSHHHHHHHHHTTCE-----------EEECCCTTTTTCGGGGGSSEECSCG
T ss_pred CCCChHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCcccccccccCeEECCH
Confidence 334599999999999 99999999999999999999999973 1222222 32 36788999998
Q ss_pred hHHHH
Q 002984 830 TDVLK 834 (861)
Q Consensus 830 ~eV~~ 834 (861)
+++..
T Consensus 215 ~el~~ 219 (226)
T 1te2_A 215 TELTA 219 (226)
T ss_dssp GGCCH
T ss_pred HHHhH
Confidence 88654
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.89 E-value=2.1e-09 Score=109.26 Aligned_cols=67 Identities=18% Similarity=0.143 Sum_probs=53.6
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---CcccceecCC
Q 002984 752 KPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK---PSKAKYYLDD 828 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~Aky~l~d 828 (861)
.+.+.+|+.+++.+++++ |++++++++|||+.||++|++.+|. ++++... +..|+|++++
T Consensus 137 ~~~~k~k~~~~~~~~~~~---g~~~~~~i~vGDs~~Di~~a~~aG~--------------~~~~~~~~~l~~~ad~v~~~ 199 (217)
T 3m1y_A 137 MMFSHSKGEMLLVLQRLL---NISKTNTLVVGDGANDLSMFKHAHI--------------KIAFNAKEVLKQHATHCINE 199 (217)
T ss_dssp CCSTTHHHHHHHHHHHHH---TCCSTTEEEEECSGGGHHHHTTCSE--------------EEEESCCHHHHTTCSEEECS
T ss_pred CCCCCChHHHHHHHHHHc---CCCHhHEEEEeCCHHHHHHHHHCCC--------------eEEECccHHHHHhcceeecc
Confidence 456788999999999999 9999999999999999999999996 4455332 3778888864
Q ss_pred --HhHHHHH
Q 002984 829 --ATDVLKL 835 (861)
Q Consensus 829 --~~eV~~~ 835 (861)
..++..+
T Consensus 200 ~dl~~~~~~ 208 (217)
T 3m1y_A 200 PDLALIKPL 208 (217)
T ss_dssp SBGGGGTTC
T ss_pred cCHHHHHHH
Confidence 4554443
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=98.89 E-value=5.4e-09 Score=110.30 Aligned_cols=54 Identities=15% Similarity=0.191 Sum_probs=45.3
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
++|+|+||+||||++ ....+ +.+.++|+.+ ++.|..++++|||+......+...
T Consensus 4 ~~k~v~fDlDGTL~~---~~~~~-~~~~~~l~~l-~~~g~~~~~~t~~~~~~~~~~~~~ 57 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYL---GKEPI-PAGKRFVERL-QEKDLPFLFVTNNTTKSPETVAQR 57 (264)
T ss_dssp SCCEEEECCBTTTEE---TTEEC-HHHHHHHHHH-HHTTCCEEEEECCCSSCHHHHHHH
T ss_pred cCCEEEEeCCCeEEe---CCEEC-cCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHH
Confidence 578999999999999 55555 7888999998 689999999999988777666543
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.88 E-value=4.4e-11 Score=122.74 Aligned_cols=72 Identities=11% Similarity=0.087 Sum_probs=58.0
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccceecCCH
Q 002984 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDDA 829 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d~ 829 (861)
...|+.+++.+++++ |++++++++|||+. ||++|++.+|.. ++.+..|+.+ ..|.+++++.
T Consensus 157 ~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~nDi~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 222 (235)
T 2om6_A 157 YKPRKEMFEKVLNSF---EVKPEESLHIGDTYAEDYQGARKVGMW-----------AVWINQEGDKVRKLEERGFEIPSI 222 (235)
T ss_dssp CTTCHHHHHHHHHHT---TCCGGGEEEEESCTTTTHHHHHHTTSE-----------EEEECTTCCSCEEEETTEEEESSG
T ss_pred CCCCHHHHHHHHHHc---CCCccceEEECCChHHHHHHHHHCCCE-----------EEEECCCCCCcccCCCCcchHhhH
Confidence 345789999999999 99999999999999 999999999974 2233335432 3477899999
Q ss_pred hHHHHHHHHHH
Q 002984 830 TDVLKLLQGLA 840 (861)
Q Consensus 830 ~eV~~~L~~L~ 840 (861)
.++.++|+.+.
T Consensus 223 ~el~~~l~~~~ 233 (235)
T 2om6_A 223 ANLKDVIELIS 233 (235)
T ss_dssp GGHHHHHHHTC
T ss_pred HHHHHHHHHHh
Confidence 99999988764
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=2.1e-09 Score=111.36 Aligned_cols=72 Identities=13% Similarity=0.004 Sum_probs=57.8
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Cccc-ceecCCH
Q 002984 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKA-KYYLDDA 829 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A-ky~l~d~ 829 (861)
+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|+. ...| .+++++.
T Consensus 160 ~Kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~~~~~~~~~~ 225 (240)
T 2no4_A 160 YKPDPRIYQFACDRL---GVNPNEVCFVSSNAWDLGGAGKFGFN-----------TVRINRQGNPPEYEFAPLKHQVNSL 225 (240)
T ss_dssp CTTSHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHTCE-----------EEEECTTCCCCCCTTSCCSEEESSG
T ss_pred CCCCHHHHHHHHHHc---CCCcccEEEEeCCHHHHHHHHHCCCE-----------EEEECCCCCCCcccCCCCceeeCCH
Confidence 445888999999999 99999999999999999999999973 345555543 2356 8999999
Q ss_pred hHHHHHHHHHH
Q 002984 830 TDVLKLLQGLA 840 (861)
Q Consensus 830 ~eV~~~L~~L~ 840 (861)
.++.++|..+.
T Consensus 226 ~el~~~l~~~~ 236 (240)
T 2no4_A 226 SELWPLLAKNV 236 (240)
T ss_dssp GGHHHHHCC--
T ss_pred HHHHHHHHHhh
Confidence 99998887654
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.88 E-value=4.8e-10 Score=116.80 Aligned_cols=74 Identities=14% Similarity=0.029 Sum_probs=61.1
Q ss_pred EEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEE----eCC-------C
Q 002984 750 EVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACT----VGR-------K 818 (861)
Q Consensus 750 EI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~----vG~-------~ 818 (861)
|..+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.+. .|. .
T Consensus 167 ~~~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~g~~~~~~l~~ 232 (254)
T 3umc_A 167 DLFGHYKPDPQVYLGACRLL---DLPPQEVMLCAAHNYDLKAARALGLK-----------TAFIARPLEYGPGQSQDLAA 232 (254)
T ss_dssp HHHTCCTTSHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHTTCE-----------EEEECCTTTTCTTCCSSSSC
T ss_pred cccccCCCCHHHHHHHHHHc---CCChHHEEEEcCchHhHHHHHHCCCe-----------EEEEecCCccCCCCCccccc
Confidence 55677889999999999999 99999999999999999999999974 12222 232 1
Q ss_pred CcccceecCCHhHHHHHHH
Q 002984 819 PSKAKYYLDDATDVLKLLQ 837 (861)
Q Consensus 819 ~s~Aky~l~d~~eV~~~L~ 837 (861)
...|+|++++..++.++|.
T Consensus 233 ~~~ad~v~~~l~el~~~l~ 251 (254)
T 3umc_A 233 EQDWDLIASDLLDLHRQLA 251 (254)
T ss_dssp SSCCSEEESSHHHHHHHHH
T ss_pred CCCCcEEECCHHHHHHHhc
Confidence 4578899999999998875
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.88 E-value=4.9e-10 Score=114.82 Aligned_cols=77 Identities=19% Similarity=0.158 Sum_probs=62.6
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC-C-----Cccccee
Q 002984 752 KPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR-K-----PSKAKYY 825 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~-----~s~Aky~ 825 (861)
.+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|++|. . ...|+|+
T Consensus 143 ~~~~kp~~~~~~~~~~~l---~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~l~~~~ad~v 208 (233)
T 3s6j_A 143 VSYGKPDPDLFLAAAKKI---GAPIDECLVIGDAIWDMLAARRCKAT-----------GVGLLSGGYDIGELERAGALRV 208 (233)
T ss_dssp SSCCTTSTHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEEGGGSCCHHHHHHTTCSEE
T ss_pred CCCCCCChHHHHHHHHHh---CCCHHHEEEEeCCHHhHHHHHHCCCE-----------EEEEeCCCCchHhHHhcCCCEE
Confidence 355777899999999999 99999999999999999999999973 35666663 2 2348999
Q ss_pred cCCHhHHHHHHHHHHhh
Q 002984 826 LDDATDVLKLLQGLATA 842 (861)
Q Consensus 826 l~d~~eV~~~L~~L~~~ 842 (861)
+++..++.++|+.....
T Consensus 209 ~~~~~el~~~l~~~~~~ 225 (233)
T 3s6j_A 209 YEDPLDLLNHLDEIASR 225 (233)
T ss_dssp ESSHHHHHHTGGGTCC-
T ss_pred ECCHHHHHHHHHHHhhh
Confidence 99999999888665443
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.88 E-value=3.6e-11 Score=120.35 Aligned_cols=64 Identities=11% Similarity=0.111 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCcccceecCCHhHHHHHHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQ 837 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~Aky~l~d~~eV~~~L~ 837 (861)
++.+++.+++++ |++++++++|||+.||++|++.+|.. ++.++++...|+|++++..++.++|+
T Consensus 142 ~~~~~~~~~~~~---~i~~~~~~~iGD~~nDi~~~~~aG~~-------------~i~~~~~~~~a~~v~~~~~el~~~l~ 205 (207)
T 2go7_A 142 SPEAATYLLDKY---QLNSDNTYYIGDRTLDVEFAQNSGIQ-------------SINFLESTYEGNHRIQALADISRIFE 205 (207)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEESSCCSCTTEEECSSTTHHHHHTS
T ss_pred CcHHHHHHHHHh---CCCcccEEEECCCHHHHHHHHHCCCe-------------EEEEecCCCCCCEEeCCHHHHHHHHh
Confidence 388999999999 99999999999999999999999973 45555432378899999999887763
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=5.2e-09 Score=111.47 Aligned_cols=72 Identities=8% Similarity=0.035 Sum_probs=57.7
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCC-CeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC--------Ccccc
Q 002984 753 PQGVSKGLVAEKVLVRMFNGGRPP-DFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK--------PSKAK 823 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------~s~Ak 823 (861)
..+..|+.+++.+++++ |+++ +++++|||+.||+.|++.+|.+ .++.++.. ...|+
T Consensus 201 ~~~Kp~~~~~~~~~~~l---gi~~~~~~i~vGD~~~Di~~a~~aG~~------------~~~~~~~~~~~~~~~~~~~ad 265 (282)
T 3nuq_A 201 LVCKPHVKAFEKAMKES---GLARYENAYFIDDSGKNIETGIKLGMK------------TCIHLVENEVNEILGQTPEGA 265 (282)
T ss_dssp CCCTTSHHHHHHHHHHH---TCCCGGGEEEEESCHHHHHHHHHHTCS------------EEEEECSCCC----CCCCTTC
T ss_pred cCCCcCHHHHHHHHHHc---CCCCcccEEEEcCCHHHHHHHHHCCCe------------EEEEEcCCccccccccCCCCC
Confidence 34556999999999999 9998 9999999999999999999974 23333322 24778
Q ss_pred eecCCHhHHHHHHHHH
Q 002984 824 YYLDDATDVLKLLQGL 839 (861)
Q Consensus 824 y~l~d~~eV~~~L~~L 839 (861)
|++++..++.++|..+
T Consensus 266 ~vi~sl~el~~~l~~l 281 (282)
T 3nuq_A 266 IVISDILELPHVVSDL 281 (282)
T ss_dssp EEESSGGGGGGTSGGG
T ss_pred EEeCCHHHHHHHhhhh
Confidence 9999999988877653
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.83 E-value=3.6e-09 Score=110.95 Aligned_cols=74 Identities=14% Similarity=0.102 Sum_probs=61.3
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----------cccc
Q 002984 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----------SKAK 823 (861)
Q Consensus 754 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----------s~Ak 823 (861)
.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|..|... ..|+
T Consensus 166 ~~Kp~~~~~~~~~~~l---gi~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ad 231 (259)
T 4eek_A 166 RGKPHPDLYTFAAQQL---GILPERCVVIEDSVTGGAAGLAAGAT-----------LWGLLVPGHPHPDGAAALSRLGAA 231 (259)
T ss_dssp CCTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEECCTTSCCSSCHHHHHHHTCS
T ss_pred CCCCChHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCCCE-----------EEEEccCCCcccccHHHHHhcCcc
Confidence 5666899999999999 99999999999999999999999974 2444445322 4588
Q ss_pred eecCCHhHHHHHHHHHHh
Q 002984 824 YYLDDATDVLKLLQGLAT 841 (861)
Q Consensus 824 y~l~d~~eV~~~L~~L~~ 841 (861)
|++++..++.++|+....
T Consensus 232 ~vi~~l~el~~~l~~~~~ 249 (259)
T 4eek_A 232 RVLTSHAELRAALAEAGL 249 (259)
T ss_dssp EEECSHHHHHHHHHHTTS
T ss_pred hhhCCHHHHHHHHHhccc
Confidence 999999999999987543
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.83 E-value=6.1e-11 Score=122.10 Aligned_cols=73 Identities=11% Similarity=0.002 Sum_probs=59.8
Q ss_pred ecCCCCHHHHHHHHHHHhhcCC-CCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCCC----Cccccee
Q 002984 752 KPQGVSKGLVAEKVLVRMFNGG-RPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYY 825 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~g-i~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~ 825 (861)
...+..|+.+++.+++++ | ++++++++|||+. ||+.|++.+|.. ++.+..|+. +..|+|+
T Consensus 154 ~~~~kp~~~~~~~~~~~~---g~~~~~~~i~vGD~~~~Di~~a~~aG~~-----------~i~~~~~~~~~~~~~~ad~v 219 (238)
T 3ed5_A 154 TGFQKPMKEYFNYVFERI---PQFSAEHTLIIGDSLTADIKGGQLAGLD-----------TCWMNPDMKPNVPEIIPTYE 219 (238)
T ss_dssp TTSCTTCHHHHHHHHHTS---TTCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECTTCCCCTTCCCCSEE
T ss_pred cCCCCCChHHHHHHHHHc---CCCChhHeEEECCCcHHHHHHHHHCCCE-----------EEEECCCCCCCcccCCCCeE
Confidence 345667899999999999 9 9999999999998 999999999973 234444432 3578999
Q ss_pred cCCHhHHHHHHHH
Q 002984 826 LDDATDVLKLLQG 838 (861)
Q Consensus 826 l~d~~eV~~~L~~ 838 (861)
+++.+++.++|+.
T Consensus 220 ~~~~~el~~~l~~ 232 (238)
T 3ed5_A 220 IRKLEELYHILNI 232 (238)
T ss_dssp ESSGGGHHHHHTC
T ss_pred ECCHHHHHHHHHh
Confidence 9999999988865
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=98.80 E-value=1.2e-09 Score=112.20 Aligned_cols=72 Identities=11% Similarity=-0.008 Sum_probs=56.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCce-EEEEeCCC-----CcccceecC
Q 002984 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEI-FACTVGRK-----PSKAKYYLD 827 (861)
Q Consensus 754 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~-~av~vG~~-----~s~Aky~l~ 827 (861)
.+..|..+++.+++++ |++++++++|||+.||+.|.+.+|.. + +.|..|.. ...+.|+++
T Consensus 135 ~~KP~~~~~~~~~~~~---~i~~~~~~~VGD~~~Di~~a~~aG~~-----------~~i~v~~g~~~~~~~~~~~~~~i~ 200 (218)
T 2o2x_A 135 MRKPNPGMLVEAGKRL---ALDLQRSLIVGDKLADMQAGKRAGLA-----------QGWLVDGEAAVQPGFAIRPLRDSS 200 (218)
T ss_dssp TSTTSCHHHHHHHHHH---TCCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEETCCCEEETTEEEEEESSHH
T ss_pred cCCCCHHHHHHHHHHc---CCCHHHEEEEeCCHHHHHHHHHCCCC-----------EeEEEecCCCCcccccCCCCEecc
Confidence 3445678999999999 99999999999999999999999973 3 34444432 135777888
Q ss_pred CHhHHHHHHHHH
Q 002984 828 DATDVLKLLQGL 839 (861)
Q Consensus 828 d~~eV~~~L~~L 839 (861)
+..++.++|+.+
T Consensus 201 ~l~el~~~l~~~ 212 (218)
T 2o2x_A 201 ELGDLLAAIETL 212 (218)
T ss_dssp HHHHHHHHHHHT
T ss_pred cHHHHHHHHHHH
Confidence 888888887765
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.80 E-value=6.8e-10 Score=114.19 Aligned_cols=77 Identities=9% Similarity=-0.006 Sum_probs=52.7
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---CcccceecCCH
Q 002984 753 PQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK---PSKAKYYLDDA 829 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~Aky~l~d~ 829 (861)
..+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. +.+++. ...|+|++++.
T Consensus 143 ~~~Kp~~~~~~~~~~~l---gi~~~~~i~vGDs~~Di~~a~~aG~~--------------~~~~~~~~~~~~ad~v~~s~ 205 (233)
T 3nas_A 143 AKGKPDPDIFLTAAAML---DVSPADCAAIEDAEAGISAIKSAGMF--------------AVGVGQGQPMLGADLVVRQT 205 (233)
T ss_dssp ------CCHHHHHHHHH---TSCGGGEEEEECSHHHHHHHHHTTCE--------------EEECC-------CSEECSSG
T ss_pred CCCCCChHHHHHHHHHc---CCCHHHEEEEeCCHHHHHHHHHcCCE--------------EEEECCccccccCCEEeCCh
Confidence 44555778999999999 99999999999999999999999973 333332 23799999887
Q ss_pred hHH--HHHHHHHHhhcCCC
Q 002984 830 TDV--LKLLQGLATASSSK 846 (861)
Q Consensus 830 ~eV--~~~L~~L~~~~~~~ 846 (861)
+++ ..+++.+.....+.
T Consensus 206 ~el~~~~~~~~~~~~~~~~ 224 (233)
T 3nas_A 206 SDLTLELLHEEWEQYRIRE 224 (233)
T ss_dssp GGCCHHHHHHHHHHHHHTC
T ss_pred HhCCHHHHHHHHHHHHhhh
Confidence 663 35555555544443
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.80 E-value=5.3e-09 Score=106.43 Aligned_cols=70 Identities=20% Similarity=0.198 Sum_probs=59.0
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC------cccceec
Q 002984 753 PQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP------SKAKYYL 826 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------s~Aky~l 826 (861)
+.+..|+.+++.+++++ |++++++++|||+.||+.|.+.+|.. +++|++|+.. ..|+|++
T Consensus 134 ~~~Kp~p~~~~~~~~~l---g~~p~~~~~vgDs~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~a~~v~ 199 (210)
T 2ah5_A 134 PEAPHKADVIHQALQTH---QLAPEQAIIIGDTKFDMLGARETGIQ-----------KLAITWGFGEQADLLNYQPDYIA 199 (210)
T ss_dssp SSCCSHHHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSSSCHHHHHTTCCSEEE
T ss_pred CCCCCChHHHHHHHHHc---CCCcccEEEECCCHHHHHHHHHCCCc-----------EEEEcCCCCCHHHHHhCCCCEEE
Confidence 55667999999999999 99999999999999999999999973 4567777541 3588999
Q ss_pred CCHhHHHHHH
Q 002984 827 DDATDVLKLL 836 (861)
Q Consensus 827 ~d~~eV~~~L 836 (861)
++..++.++|
T Consensus 200 ~~~~el~~~l 209 (210)
T 2ah5_A 200 HKPLEVLAYF 209 (210)
T ss_dssp SSTTHHHHHT
T ss_pred CCHHHHHHHh
Confidence 9999987654
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.80 E-value=1.6e-08 Score=101.19 Aligned_cols=70 Identities=19% Similarity=0.051 Sum_probs=52.1
Q ss_pred CHHHHHHHHHhccceEEEecCCccccCCC---------------------CCCCCCCHHHHHHHHHhhcCCCCeEEEECC
Q 002984 578 SIDHIVSAYRKTERRAIFLDYDGTVVPET---------------------SIIKSPGPEVISVLKTLCSDPNNTVFIVSG 636 (861)
Q Consensus 578 ~~~~~~~~y~~s~~klI~~DlDGTLl~~~---------------------~~~~~~s~~~~~~L~~L~~~~g~~v~I~TG 636 (861)
..+.+...-...++|+|+||+||||++.. .....+.+.+.++|++| ++.|+.++|+||
T Consensus 14 ~~~~~~~~~m~~~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L-~~~G~~v~ivT~ 92 (187)
T 2wm8_A 14 GTENLYFQSMARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRL-QSLGVPGAAASR 92 (187)
T ss_dssp CHHHHHHHHHHTSCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHH-HHHTCCEEEEEC
T ss_pred CCchhHHHHHHhccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHH-HHCCceEEEEeC
Confidence 34444444444568999999999999521 02335678999999999 788999999999
Q ss_pred CC-hhhHHHHhcc
Q 002984 637 RG-RSSLSEWLAP 648 (861)
Q Consensus 637 R~-~~~l~~~~~~ 648 (861)
++ ...+..++..
T Consensus 93 ~~~~~~~~~~l~~ 105 (187)
T 2wm8_A 93 TSEIEGANQLLEL 105 (187)
T ss_dssp CSCHHHHHHHHHH
T ss_pred CCChHHHHHHHHH
Confidence 99 6877777743
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.1e-08 Score=104.52 Aligned_cols=74 Identities=7% Similarity=-0.119 Sum_probs=59.1
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC-CC----Ccccceec
Q 002984 752 KPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG-RK----PSKAKYYL 826 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~----~s~Aky~l 826 (861)
.+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.+..| +. +..|+|++
T Consensus 148 ~~~~kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~ 213 (230)
T 3um9_A 148 VRLFKPHQKVYELAMDTL---HLGESEILFVSCNSWDATGAKYFGYP-----------VCWINRSNGVFDQLGVVPDIVV 213 (230)
T ss_dssp TTCCTTCHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHTCC-----------EEEECTTSCCCCCSSCCCSEEE
T ss_pred cccCCCChHHHHHHHHHh---CCCcccEEEEeCCHHHHHHHHHCCCE-----------EEEEeCCCCccccccCCCcEEe
Confidence 345666899999999999 99999999999999999999999974 2233333 22 35789999
Q ss_pred CCHhHHHHHHHHH
Q 002984 827 DDATDVLKLLQGL 839 (861)
Q Consensus 827 ~d~~eV~~~L~~L 839 (861)
++..++.++|+.+
T Consensus 214 ~~~~el~~~l~~~ 226 (230)
T 3um9_A 214 SDVGVLASRFSPV 226 (230)
T ss_dssp SSHHHHHHTCCC-
T ss_pred CCHHHHHHHHHHh
Confidence 9999998887765
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.78 E-value=5.1e-09 Score=109.30 Aligned_cols=71 Identities=13% Similarity=0.123 Sum_probs=57.0
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCCC----------Ccccce-
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGRK----------PSKAKY- 824 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----------~s~Aky- 824 (861)
.++.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|..|.. ...|++
T Consensus 163 p~~~~~~~~~~~l---~~~~~~~i~iGD~~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
T 2pke_A 163 KDPQTYARVLSEF---DLPAERFVMIGNSLRSDVEPVLAIGGW-----------GIYTPYAVTWAHEQDHGVAADEPRLR 228 (251)
T ss_dssp CSHHHHHHHHHHH---TCCGGGEEEEESCCCCCCHHHHHTTCE-----------EEECCCC-------------CCTTEE
T ss_pred CCHHHHHHHHHHh---CcCchhEEEECCCchhhHHHHHHCCCE-----------EEEECCCCccccccccccccCCCCee
Confidence 3789999999999 99999999999999 999999999974 233433321 235777
Q ss_pred ecCCHhHHHHHHHHHHh
Q 002984 825 YLDDATDVLKLLQGLAT 841 (861)
Q Consensus 825 ~l~d~~eV~~~L~~L~~ 841 (861)
.+++..++..+|+.+..
T Consensus 229 ~i~~~~el~~~l~~~~~ 245 (251)
T 2pke_A 229 EVPDPSGWPAAVRALDA 245 (251)
T ss_dssp ECSSGGGHHHHHHHHHH
T ss_pred eeCCHHHHHHHHHHhCh
Confidence 89999999999988763
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.9e-08 Score=103.19 Aligned_cols=72 Identities=15% Similarity=0.021 Sum_probs=56.6
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEe-CCC----CcccceecCCH
Q 002984 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTV-GRK----PSKAKYYLDDA 829 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v-G~~----~s~Aky~l~d~ 829 (861)
+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.|.. ++. +..|+|++++.
T Consensus 154 ~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~~G~~-----------~~~v~~~~~~~~~~~~~~~~v~~~~ 219 (233)
T 3umb_A 154 YKTAPAAYALAPRAF---GVPAAQILFVSSNGWDACGATWHGFT-----------TFWINRLGHPPEALDVAPAAAGHDM 219 (233)
T ss_dssp CTTSHHHHTHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCE-----------EEEECTTCCCCCSSSCCCSEEESSH
T ss_pred CCcCHHHHHHHHHHh---CCCcccEEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCCchhccCCCCEEECCH
Confidence 344788999999999 99999999999999999999999973 122222 332 24689999999
Q ss_pred hHHHHHHHHHH
Q 002984 830 TDVLKLLQGLA 840 (861)
Q Consensus 830 ~eV~~~L~~L~ 840 (861)
.++.++|+...
T Consensus 220 ~el~~~l~~~~ 230 (233)
T 3umb_A 220 RDLLQFVQARQ 230 (233)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHHHhh
Confidence 99999987643
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.77 E-value=2.9e-09 Score=110.71 Aligned_cols=72 Identities=15% Similarity=0.144 Sum_probs=60.0
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC------ccccee
Q 002984 752 KPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP------SKAKYY 825 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------s~Aky~ 825 (861)
.+.+..|+.++..+++++ |++++++++|||+.||+.|.+.+|.. +++|++|... ..|+++
T Consensus 161 ~~~~Kp~p~~~~~~~~~l---~~~~~~~~~vGDs~~Di~~a~~aG~~-----------~v~v~~~~~~~~~~~~~~a~~~ 226 (240)
T 2hi0_A 161 GIRRKPAPDMTSECVKVL---GVPRDKCVYIGDSEIDIQTARNSEMD-----------EIAVNWGFRSVPFLQKHGATVI 226 (240)
T ss_dssp TSCCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEESSSSSCHHHHHHTTCCCE
T ss_pred CCCCCCCHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEECCCCCchhHHHhcCCCEE
Confidence 456778999999999999 99999999999999999999999973 3556666532 368899
Q ss_pred cCCHhHHHHHHH
Q 002984 826 LDDATDVLKLLQ 837 (861)
Q Consensus 826 l~d~~eV~~~L~ 837 (861)
+++..++..+|.
T Consensus 227 ~~~~~el~~~l~ 238 (240)
T 2hi0_A 227 VDTAEKLEEAIL 238 (240)
T ss_dssp ECSHHHHHHHHH
T ss_pred ECCHHHHHHHhc
Confidence 999999887764
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.77 E-value=7e-10 Score=118.15 Aligned_cols=67 Identities=10% Similarity=-0.018 Sum_probs=54.7
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCC-------CCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC-----C
Q 002984 752 KPQGVSKGLVAEKVLVRMFNGGR-------PPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK-----P 819 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi-------~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~ 819 (861)
.+.+..|+.+++.+++++ |+ ++++|++|||+.||++|++.+|.. ++.|+.|+. .
T Consensus 166 ~~~~kp~~~~~~~~~~~l---gi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~-----------~i~v~~~~~~~~~~~ 231 (275)
T 2qlt_A 166 VKQGKPHPEPYLKGRNGL---GFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCK-----------IVGIATTFDLDFLKE 231 (275)
T ss_dssp CSSCTTSSHHHHHHHHHT---TCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCE-----------EEEESSSSCHHHHTT
T ss_pred CCCCCCChHHHHHHHHHc---CCCccccCCCcceEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCCHHHHhh
Confidence 356677999999999999 99 999999999999999999999974 345555643 2
Q ss_pred cccceecCCHhHH
Q 002984 820 SKAKYYLDDATDV 832 (861)
Q Consensus 820 s~Aky~l~d~~eV 832 (861)
..|+|++++.+++
T Consensus 232 ~~ad~v~~~~~el 244 (275)
T 2qlt_A 232 KGCDIIVKNHESI 244 (275)
T ss_dssp SSCSEEESSGGGE
T ss_pred CCCCEEECChHHc
Confidence 3588998887765
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.77 E-value=2.6e-09 Score=110.83 Aligned_cols=74 Identities=14% Similarity=0.041 Sum_probs=60.1
Q ss_pred EecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEE----eCC-------CC
Q 002984 751 VKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACT----VGR-------KP 819 (861)
Q Consensus 751 I~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~----vG~-------~~ 819 (861)
..+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.+. +|. ..
T Consensus 164 ~~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~g~~~~~~~~~~ 229 (254)
T 3umg_A 164 INRKYKPDPQAYLRTAQVL---GLHPGEVMLAAAHNGDLEAAHATGLA-----------TAFILRPVEHGPHQTDDLAPT 229 (254)
T ss_dssp HHTCCTTSHHHHHHHHHHT---TCCGGGEEEEESCHHHHHHHHHTTCE-----------EEEECCTTTTCTTCCSCSSCS
T ss_pred cCCCCCCCHHHHHHHHHHc---CCChHHEEEEeCChHhHHHHHHCCCE-----------EEEEecCCcCCCCcccccccc
Confidence 3455667899999999999 99999999999999999999999974 22333 332 24
Q ss_pred cccceecCCHhHHHHHHHH
Q 002984 820 SKAKYYLDDATDVLKLLQG 838 (861)
Q Consensus 820 s~Aky~l~d~~eV~~~L~~ 838 (861)
..|+|++++..++.++|..
T Consensus 230 ~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 230 GSWDISATDITDLAAQLRA 248 (254)
T ss_dssp SCCSEEESSHHHHHHHHHH
T ss_pred CCCceEECCHHHHHHHhcC
Confidence 6788999999999998875
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.75 E-value=2.1e-09 Score=108.04 Aligned_cols=69 Identities=19% Similarity=0.138 Sum_probs=54.5
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC---CCcccceecCCH
Q 002984 753 PQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR---KPSKAKYYLDDA 829 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~---~~s~Aky~l~d~ 829 (861)
..+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.+..|. ....|++++++.
T Consensus 142 ~~~kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~a~~~~~~~ 207 (214)
T 3e58_A 142 KESKPNPEIYLTALKQL---NVQASRALIIEDSEKGIAAGVAADVE-----------VWAIRDNEFGMDQSAAKGLLDSL 207 (214)
T ss_dssp SSCTTSSHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTCE-----------EEEECCSSSCCCCTTSSEEESSG
T ss_pred cCCCCChHHHHHHHHHc---CCChHHeEEEeccHhhHHHHHHCCCE-----------EEEECCCCccchhccHHHHHHHH
Confidence 34556789999999999 99999999999999999999999973 22332221 136789999998
Q ss_pred hHHHHH
Q 002984 830 TDVLKL 835 (861)
Q Consensus 830 ~eV~~~ 835 (861)
.++.++
T Consensus 208 ~el~~~ 213 (214)
T 3e58_A 208 TDVLDL 213 (214)
T ss_dssp GGGGGG
T ss_pred HHHHhh
Confidence 887654
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.74 E-value=4.7e-08 Score=102.21 Aligned_cols=76 Identities=16% Similarity=0.087 Sum_probs=59.3
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEe------------------
Q 002984 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTV------------------ 815 (861)
Q Consensus 754 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v------------------ 815 (861)
.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.+..
T Consensus 145 ~~Kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~l~~g~~~~~ 210 (253)
T 1qq5_A 145 VFKPHPDSYALVEEVL---GVTPAEVLFVSSNGFDVGGAKNFGFS-----------VARVARLSQEALARELVSGTIAPL 210 (253)
T ss_dssp CCTTSHHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHHHTCE-----------EEEECCSCHHHHHHHTTSSSCCHH
T ss_pred CCCCCHHHHHHHHHHc---CCCHHHEEEEeCChhhHHHHHHCCCE-----------EEEECCcccchhhhhccccccccc
Confidence 4556888999999999 99999999999999999999999974 223333
Q ss_pred -----CC-----CCcccceecCCHhHHHHHHHHHHhhc
Q 002984 816 -----GR-----KPSKAKYYLDDATDVLKLLQGLATAS 843 (861)
Q Consensus 816 -----G~-----~~s~Aky~l~d~~eV~~~L~~L~~~~ 843 (861)
|. .+..|+|++++..++.++|..+.+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~ 248 (253)
T 1qq5_A 211 TMFKALRMREETYAEAPDFVVPALGDLPRLVRGMAGAH 248 (253)
T ss_dssp HHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC---
T ss_pred ccccccccccCCCCCCCCeeeCCHHHHHHHHHHhcccc
Confidence 11 12568899999999999998886543
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.74 E-value=3.2e-08 Score=100.17 Aligned_cols=70 Identities=7% Similarity=-0.088 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHhhcCCCCC-CeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------------------
Q 002984 758 KGLVAEKVLVRMFNGGRPP-DFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------------------ 818 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------------ 818 (861)
+...+..+++++ |+.+ +++++|||+.+|+.+.+.+|.. +++|.+|..
T Consensus 89 ~p~~~~~a~~~l---~~~~~~~~v~VGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~e~~ 154 (196)
T 2oda_A 89 QPDACWMALMAL---NVSQLEGCVLISGDPRLLQSGLNAGLW-----------TIGLASCGPLCGLSPSQWQALNNAERE 154 (196)
T ss_dssp STHHHHHHHHHT---TCSCSTTCEEEESCHHHHHHHHHHTCE-----------EEEESSSSTTTCCCHHHHHHSCHHHHH
T ss_pred ChHHHHHHHHHc---CCCCCccEEEEeCCHHHHHHHHHCCCE-----------EEEEccCCccccccHHHhhhcchhhhh
Confidence 345666777888 8865 8999999999999999999973 456666642
Q ss_pred -----------CcccceecCCHhHHHHHHHHHHh
Q 002984 819 -----------PSKAKYYLDDATDVLKLLQGLAT 841 (861)
Q Consensus 819 -----------~s~Aky~l~d~~eV~~~L~~L~~ 841 (861)
...|+|++++..++.++|..+..
T Consensus 155 ~~~~~~~~~l~~~~~d~vi~~~~eL~~~l~~~~~ 188 (196)
T 2oda_A 155 QRRAQATLKLYSLGVHSVIDHLGELESCLADIAL 188 (196)
T ss_dssp HHHHHHHHHHHHTTCSEEESSGGGHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEeCCHHHHHHHHHHHHH
Confidence 13588999999999999887754
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.74 E-value=2.5e-09 Score=109.10 Aligned_cols=66 Identities=17% Similarity=0.089 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEE----EeCCC-----Ccccceec
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFAC----TVGRK-----PSKAKYYL 826 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av----~vG~~-----~s~Aky~l 826 (861)
.|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.| ++|+. ...|+|++
T Consensus 158 pk~~~~~~~~~~l---gi~~~~~i~iGD~~~~Di~~a~~aG~~-----------~v~v~~~~~~g~~~~~~~~~~~d~v~ 223 (234)
T 3ddh_A 158 KTEKEYLRLLSIL---QIAPSELLMVGNSFKSDIQPVLSLGGY-----------GVHIPFEVMWKHEVTETFAHERLKQV 223 (234)
T ss_dssp CSHHHHHHHHHHH---TCCGGGEEEEESCCCCCCHHHHHHTCE-----------EEECCCCTTCCCC---CCCCTTEEEC
T ss_pred CCHHHHHHHHHHh---CCCcceEEEECCCcHHHhHHHHHCCCe-----------EEEecCCcccccCCcccccCCCceec
Confidence 5999999999999 99999999999996 999999999974 1222 22432 23348899
Q ss_pred CCHhHHHHHH
Q 002984 827 DDATDVLKLL 836 (861)
Q Consensus 827 ~d~~eV~~~L 836 (861)
++..|+.++|
T Consensus 224 ~~l~el~~~l 233 (234)
T 3ddh_A 224 KRLDDLLSLL 233 (234)
T ss_dssp SSGGGHHHHC
T ss_pred ccHHHHHHhc
Confidence 9999998765
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.74 E-value=3.6e-08 Score=98.33 Aligned_cols=66 Identities=23% Similarity=0.430 Sum_probs=56.5
Q ss_pred EecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCcccceecCCHh
Q 002984 751 VKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDAT 830 (861)
Q Consensus 751 I~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~Aky~l~d~~ 830 (861)
..|...+|+.+++.+ +++++++|||+.||++|++.+|. +|+|+++...|+|++++.+
T Consensus 134 ~~~~~~~k~~~l~~l---------~~~~~i~iGD~~~Di~~~~~ag~--------------~v~~~~~~~~ad~v~~~~~ 190 (201)
T 4ap9_A 134 IRLRFRDKGEFLKRF---------RDGFILAMGDGYADAKMFERADM--------------GIAVGREIPGADLLVKDLK 190 (201)
T ss_dssp EECCSSCHHHHHGGG---------TTSCEEEEECTTCCHHHHHHCSE--------------EEEESSCCTTCSEEESSHH
T ss_pred CcCCccCHHHHHHhc---------CcCcEEEEeCCHHHHHHHHhCCc--------------eEEECCCCccccEEEccHH
Confidence 455667799888876 57899999999999999999996 6788887669999999999
Q ss_pred HHHHHHHHH
Q 002984 831 DVLKLLQGL 839 (861)
Q Consensus 831 eV~~~L~~L 839 (861)
++.++|+.+
T Consensus 191 el~~~l~~l 199 (201)
T 4ap9_A 191 ELVDFIKNL 199 (201)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999998865
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.74 E-value=3.1e-09 Score=112.44 Aligned_cols=58 Identities=16% Similarity=0.208 Sum_probs=45.8
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCc
Q 002984 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLG 653 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lg 653 (861)
+|+|+||+||||++ ....+ +.+.++|+++ ++.|+.++++|||+......+...+..+|
T Consensus 1 ik~i~~D~DGtL~~---~~~~~-~~~~~~l~~l-~~~g~~~~~~T~r~~~~~~~~~~~l~~lg 58 (263)
T 1zjj_A 1 MVAIIFDMDGVLYR---GNRAI-PGVRELIEFL-KERGIPFAFLTNNSTKTPEMYREKLLKMG 58 (263)
T ss_dssp CEEEEEECBTTTEE---TTEEC-TTHHHHHHHH-HHHTCCEEEEESCCSSCHHHHHHHHHTTT
T ss_pred CeEEEEeCcCceEe---CCEeC-ccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHCC
Confidence 47999999999998 45444 7899999999 78999999999999876666554433333
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.73 E-value=8.8e-09 Score=105.79 Aligned_cols=75 Identities=11% Similarity=-0.017 Sum_probs=56.3
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC-C----CcccceecC
Q 002984 753 PQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR-K----PSKAKYYLD 827 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~----~s~Aky~l~ 827 (861)
..+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.+..|. . ...|+|+++
T Consensus 148 ~~~Kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 213 (232)
T 1zrn_A 148 QVYKPDNRVYELAEQAL---GLDRSAILFVASNAWDATGARYFGFP-----------TCWINRTGNVFEEMGQTPDWEVT 213 (232)
T ss_dssp TCCTTSHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCC-----------EEEECTTCCCCCSSSCCCSEEES
T ss_pred CCCCCCHHHHHHHHHHc---CCCcccEEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCCccccCCCCCEEEC
Confidence 44556888999999999 99999999999999999999999974 23333331 1 256889999
Q ss_pred CHhHHHHHHHHHHh
Q 002984 828 DATDVLKLLQGLAT 841 (861)
Q Consensus 828 d~~eV~~~L~~L~~ 841 (861)
+..++..+|+.+..
T Consensus 214 ~~~el~~~l~~~~~ 227 (232)
T 1zrn_A 214 SLRAVVELFETAAG 227 (232)
T ss_dssp SHHHHHTTC-----
T ss_pred CHHHHHHHHHhhcc
Confidence 99999888766543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.69 E-value=4.7e-09 Score=108.85 Aligned_cols=76 Identities=18% Similarity=0.194 Sum_probs=61.4
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCCCC-------cccce
Q 002984 753 PQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGRKP-------SKAKY 824 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-------s~Aky 824 (861)
+.+..|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|..|... ..|++
T Consensus 147 ~~~Kp~~~~~~~~~~~~---g~~~~~~i~iGD~~~~Di~~a~~aG~~-----------~~~v~~g~~~~~~~~~~~~~~~ 212 (241)
T 2hoq_A 147 GVKKPHPKIFKKALKAF---NVKPEEALMVGDRLYSDIYGAKRVGMK-----------TVWFRYGKHSERELEYRKYADY 212 (241)
T ss_dssp TCCTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECCSCCCHHHHTTGGGCSE
T ss_pred CCCCCCHHHHHHHHHHc---CCCcccEEEECCCchHhHHHHHHCCCE-----------EEEECCCCCCcccccccCCCCE
Confidence 44556789999999999 99999999999998 999999999974 3455556531 26889
Q ss_pred ecCCHhHHHHHHHHHHhh
Q 002984 825 YLDDATDVLKLLQGLATA 842 (861)
Q Consensus 825 ~l~d~~eV~~~L~~L~~~ 842 (861)
++++..++.++|+.+.+.
T Consensus 213 ~i~~~~el~~~l~~~~~~ 230 (241)
T 2hoq_A 213 EIDNLESLLEVLARESSS 230 (241)
T ss_dssp EESSTTHHHHHHHHCCSC
T ss_pred EECCHHHHHHHHHHHhhc
Confidence 999999999988765433
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=4.4e-08 Score=103.64 Aligned_cols=60 Identities=20% Similarity=0.244 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Ccccceec--CCHh
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYL--DDAT 830 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l--~d~~ 830 (861)
+|+.+++.+.+.+ ++++|||+.||++|++.+|. +|++|++ ...|++.+ ++.+
T Consensus 194 ~k~~~~k~~~~~~--------~~~~vGD~~nDi~~~~~Ag~--------------~va~~~~~~~~~~~a~~~~~~~~~~ 251 (280)
T 3skx_A 194 EKAEKVKEVQQKY--------VTAMVGDGVNDAPALAQADV--------------GIAIGAGTDVAVETADIVLVRNDPR 251 (280)
T ss_dssp GHHHHHHHHHTTS--------CEEEEECTTTTHHHHHHSSE--------------EEECSCCSSSCCCSSSEECSSCCTH
T ss_pred HHHHHHHHHHhcC--------CEEEEeCCchhHHHHHhCCc--------------eEEecCCcHHHHhhCCEEEeCCCHH
Confidence 5999988887643 68999999999999999985 7888875 35677877 8899
Q ss_pred HHHHHHHH
Q 002984 831 DVLKLLQG 838 (861)
Q Consensus 831 eV~~~L~~ 838 (861)
+|.++|+.
T Consensus 252 ~l~~~l~~ 259 (280)
T 3skx_A 252 DVAAIVEL 259 (280)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999874
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.65 E-value=6.7e-08 Score=96.83 Aligned_cols=75 Identities=15% Similarity=0.005 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCC-cchHHHHHHccccCCCCCCCCCCceEEEEeCCCC--------cccceecC-
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDD-RSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP--------SKAKYYLD- 827 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~--------s~Aky~l~- 827 (861)
+....+.+++++ |++++++++|||+ .+|+.+.+.+|.. ++.|..|... ..++++++
T Consensus 99 ~p~~~~~~~~~~---~~~~~~~l~VGD~~~~Di~~A~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~v~~~ 164 (189)
T 3ib6_A 99 DKTIFDFTLNAL---QIDKTEAVMVGNTFESDIIGANRAGIH-----------AIWLQNPEVCLQDERLPLVAPPFVIPV 164 (189)
T ss_dssp SHHHHHHHHHHH---TCCGGGEEEEESBTTTTHHHHHHTTCE-----------EEEECCTTTCBCSSCCCBCSSSCEEEE
T ss_pred CHHHHHHHHHHc---CCCcccEEEECCCcHHHHHHHHHCCCe-----------EEEECCccccccccccccCCCcceecc
Confidence 456788899999 9999999999999 7999999999973 2333333221 27788888
Q ss_pred -CHhHHHHHHHHHHhhcCCC
Q 002984 828 -DATDVLKLLQGLATASSSK 846 (861)
Q Consensus 828 -d~~eV~~~L~~L~~~~~~~ 846 (861)
+..++.++|+.+-+-.+..
T Consensus 165 ~~l~~l~~~l~l~~~~~~~~ 184 (189)
T 3ib6_A 165 WDLADVPEALLLLKKISEGH 184 (189)
T ss_dssp SSGGGHHHHHHHHHHHC---
T ss_pred ccHHhHHHHHHHHHHhhccc
Confidence 9999999887766655543
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.64 E-value=1e-08 Score=103.57 Aligned_cols=68 Identities=21% Similarity=0.227 Sum_probs=54.1
Q ss_pred CCCH--HHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC-C---cccceecCC
Q 002984 755 GVSK--GLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK-P---SKAKYYLDD 828 (861)
Q Consensus 755 gvsK--g~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-~---s~Aky~l~d 828 (861)
+.+| +.+++.+++++ |++++++++|||+.||+.|++.+|.. ++.+.+|.. . ..|+|++++
T Consensus 135 ~~~KP~~~~~~~~~~~~---~~~~~~~i~vGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~a~~~~~~ 200 (209)
T 2hdo_A 135 PKRKPDPLPLLTALEKV---NVAPQNALFIGDSVSDEQTAQAANVD-----------FGLAVWGMDPNADHQKVAHRFQK 200 (209)
T ss_dssp SCCTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEEGGGCCTTGGGSCCSEEESS
T ss_pred CCCCCCcHHHHHHHHHc---CCCcccEEEECCChhhHHHHHHcCCe-----------EEEEcCCCCChhhhccCCEEeCC
Confidence 5678 99999999999 99999999999999999999999973 233334542 1 128899998
Q ss_pred HhHHHHHH
Q 002984 829 ATDVLKLL 836 (861)
Q Consensus 829 ~~eV~~~L 836 (861)
..++.++|
T Consensus 201 ~~el~~~l 208 (209)
T 2hdo_A 201 PLDILELF 208 (209)
T ss_dssp GGGGGGGC
T ss_pred HHHHHHhh
Confidence 88876654
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.64 E-value=3.2e-09 Score=110.74 Aligned_cols=72 Identities=17% Similarity=0.171 Sum_probs=58.9
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCC--CeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Ccccceec
Q 002984 753 PQGVSKGLVAEKVLVRMFNGGRPP--DFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYL 826 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~--d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l 826 (861)
..+..|+.+++.+++++ |+++ +++++|||+.||+.|++.+|.. ++.|+.|+. +..|+|++
T Consensus 168 ~~~Kp~~~~~~~~~~~l---gi~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~~~~ad~v~ 233 (250)
T 3l5k_A 168 QHGKPDPDIFLACAKRF---SPPPAMEKCLVFEDAPNGVEAALAAGMQ-----------VVMVPDGNLSRDLTTKATLVL 233 (250)
T ss_dssp CSCTTSTHHHHHHHHTS---SSCCCGGGEEEEESSHHHHHHHHHTTCE-----------EEECCCTTSCGGGSTTSSEEC
T ss_pred cCCCCChHHHHHHHHHc---CCCCCcceEEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCchhhcccccEee
Confidence 44556889999999999 9988 9999999999999999999973 355666663 47889999
Q ss_pred CCHhHHHHHHHH
Q 002984 827 DDATDVLKLLQG 838 (861)
Q Consensus 827 ~d~~eV~~~L~~ 838 (861)
++.+++...|..
T Consensus 234 ~sl~el~~~l~~ 245 (250)
T 3l5k_A 234 NSLQDFQPELFG 245 (250)
T ss_dssp SCGGGCCGGGGT
T ss_pred cCHHHhhHHHhc
Confidence 999888666544
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.64 E-value=1.2e-08 Score=104.86 Aligned_cols=71 Identities=18% Similarity=0.207 Sum_probs=58.2
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC---cccceecCCHhH
Q 002984 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP---SKAKYYLDDATD 831 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~---s~Aky~l~d~~e 831 (861)
+-.|+.+++.+++++ |++++++++|||+.||+.|++.+|.. +++|.+|..+ ..|++++++..+
T Consensus 138 ~Kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~e 203 (222)
T 2nyv_A 138 KKPSPTPVLKTLEIL---GEEPEKALIVGDTDADIEAGKRAGTK-----------TALALWGYVKLNSQIPDFTLSRPSD 203 (222)
T ss_dssp TCCTTHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEETTSSCSCCCCCCSEEESSTTH
T ss_pred CCCChHHHHHHHHHh---CCCchhEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCccccCCCEEECCHHH
Confidence 347899999999999 99999999999999999999999973 2445555432 568899999999
Q ss_pred HHHHHHHH
Q 002984 832 VLKLLQGL 839 (861)
Q Consensus 832 V~~~L~~L 839 (861)
+.++|+.+
T Consensus 204 l~~~l~~~ 211 (222)
T 2nyv_A 204 LVKLMDNH 211 (222)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 98887643
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.63 E-value=2.8e-09 Score=111.20 Aligned_cols=79 Identities=27% Similarity=0.349 Sum_probs=58.7
Q ss_pred EEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC-
Q 002984 740 AVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK- 818 (861)
Q Consensus 740 ~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~- 818 (861)
..+.++....+.+| |+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.|..|..
T Consensus 158 ~~~~~~~~~~~~Kp----~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~ 219 (243)
T 2hsz_A 158 SEMLGGQSLPEIKP----HPAPFYYLCGKF---GLYPKQILFVGDSQNDIFAAHSAGCA-----------VVGLTYGYNY 219 (243)
T ss_dssp SEEECTTTSSSCTT----SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSCST
T ss_pred EEEEecccCCCCCc----CHHHHHHHHHHh---CcChhhEEEEcCCHHHHHHHHHCCCe-----------EEEEcCCCCc
Confidence 34444444333344 688999999999 99999999999999999999999974 345555531
Q ss_pred -----CcccceecCCHhHHHHHH
Q 002984 819 -----PSKAKYYLDDATDVLKLL 836 (861)
Q Consensus 819 -----~s~Aky~l~d~~eV~~~L 836 (861)
...|++++++..++.++|
T Consensus 220 ~~~~~~~~ad~vi~~~~el~~~l 242 (243)
T 2hsz_A 220 NIPIAQSKPDWIFDDFADILKIT 242 (243)
T ss_dssp TCCGGGGCCSEEESSGGGGGGGT
T ss_pred hhhhhhCCCCEEECCHHHHHHHh
Confidence 356788899888876554
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.61 E-value=4e-08 Score=100.75 Aligned_cols=73 Identities=14% Similarity=0.096 Sum_probs=58.1
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCC---CCcccceecC
Q 002984 752 KPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGR---KPSKAKYYLD 827 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~---~~s~Aky~l~ 827 (861)
.+.+..|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.+.-|. ....|+|+++
T Consensus 158 ~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~d~vi~ 223 (240)
T 3qnm_A 158 LGVLKPRPEIFHFALSAT---QSELRESLMIGDSWEADITGAHGVGMH-----------QAFYNVTERTVFPFQPTYHIH 223 (240)
T ss_dssp TTCCTTSHHHHHHHHHHT---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECCSCCCCCSSCCSEEES
T ss_pred CCCCCCCHHHHHHHHHHc---CCCcccEEEECCCchHhHHHHHHcCCe-----------EEEEcCCCCCCcCCCCceEEC
Confidence 355677899999999999 99999999999995 999999999973 12222232 2467999999
Q ss_pred CHhHHHHHHHH
Q 002984 828 DATDVLKLLQG 838 (861)
Q Consensus 828 d~~eV~~~L~~ 838 (861)
+..|+..+++.
T Consensus 224 sl~e~~~~~~~ 234 (240)
T 3qnm_A 224 SLKELMNLLEG 234 (240)
T ss_dssp STHHHHHHTC-
T ss_pred CHHHHHHHHhc
Confidence 99999887654
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.58 E-value=2.6e-08 Score=102.12 Aligned_cols=66 Identities=6% Similarity=0.036 Sum_probs=50.5
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEE-------eCC-----CCcccceec
Q 002984 760 LVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACT-------VGR-----KPSKAKYYL 826 (861)
Q Consensus 760 ~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~-------vG~-----~~s~Aky~l 826 (861)
.+++. ++++ |++++++++|||+. ||+.|.+.+|.. ++.+. +|+ ....|+|++
T Consensus 160 ~~l~~-~~~l---gi~~~~~~~vGD~~~~Di~~a~~aG~~-----------~~~~~~~~~~~g~g~~~~~~~~~~ad~v~ 224 (240)
T 3smv_A 160 YMIDA-LAKA---GIEKKDILHTAESLYHDHIPANDAGLV-----------SAWIYRRHGKEGYGATHVPSRMPNVDFRF 224 (240)
T ss_dssp HHHHH-HHHT---TCCGGGEEEEESCTTTTHHHHHHHTCE-----------EEEECTTCC-------CCCSSCCCCSEEE
T ss_pred HHHHH-HHhc---CCCchhEEEECCCchhhhHHHHHcCCe-----------EEEEcCCCcccCCCCCCCCcCCCCCCEEe
Confidence 35555 8888 99999999999995 999999999974 11111 122 237889999
Q ss_pred CCHhHHHHHHHHHH
Q 002984 827 DDATDVLKLLQGLA 840 (861)
Q Consensus 827 ~d~~eV~~~L~~L~ 840 (861)
++..++.++|+.+.
T Consensus 225 ~~~~el~~~l~~~l 238 (240)
T 3smv_A 225 NSMGEMAEAHKQAL 238 (240)
T ss_dssp SSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHh
Confidence 99999999998764
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.7e-06 Score=96.83 Aligned_cols=243 Identities=11% Similarity=0.025 Sum_probs=143.6
Q ss_pred HHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhh--cCCEEeecChHhHH
Q 002984 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDLIGFHTFDYAR 267 (861)
Q Consensus 190 ~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll--~~dligF~t~~~~~ 267 (861)
++++..+| |+|.+|+.-...++ .+..+..++|++ ..+.+..+.+ .++.+++.+-+. .+|++-..|..+.+
T Consensus 88 ~~l~~~kP--D~Vlv~gd~~~~~a-alaA~~~~IPv~-h~eaglrs~~----~~~pee~nR~~~~~~a~~~~~~te~~~~ 159 (385)
T 4hwg_A 88 EVLEKEKP--DAVLFYGDTNSCLS-AIAAKRRKIPIF-HMEAGNRCFD----QRVPEEINRKIIDHISDVNITLTEHARR 159 (385)
T ss_dssp HHHHHHCC--SEEEEESCSGGGGG-HHHHHHTTCCEE-EESCCCCCSC----TTSTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHhcCC--cEEEEECCchHHHH-HHHHHHhCCCEE-EEeCCCcccc----ccCcHHHHHHHHHhhhceeecCCHHHHH
Confidence 34566788 89999986555555 454455578874 4444443321 134445555553 37888778888888
Q ss_pred HHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEec-ccCCchHHHHhhCCchhHHHHHHHHHHcC---CCeEEEeecCc
Q 002984 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILP-VGVHMGRLESVLNLPATATKIKEIEKQFD---GKKLILGIDDM 343 (861)
Q Consensus 268 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p-~GId~~~~~~~~~~~~~~~~~~~l~~~~~---~~~vil~Vdrl 343 (861)
+|.. .|+.. + +|.+.+ +++|.-.+.. ......++++++. ++.+++..+|.
T Consensus 160 ~l~~-----~G~~~--~-------------~I~vtGnp~~D~~~~~~------~~~~~~~~~~~lgl~~~~~iLvt~hr~ 213 (385)
T 4hwg_A 160 YLIA-----EGLPA--E-------------LTFKSGSHMPEVLDRFM------PKILKSDILDKLSLTPKQYFLISSHRE 213 (385)
T ss_dssp HHHH-----TTCCG--G-------------GEEECCCSHHHHHHHHH------HHHHHCCHHHHTTCCTTSEEEEEECCC
T ss_pred HHHH-----cCCCc--C-------------cEEEECCchHHHHHHhh------hhcchhHHHHHcCCCcCCEEEEEeCCc
Confidence 8775 34421 1 112222 3455332210 0111234555552 45567778875
Q ss_pred c---cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHH-hhccCCCCcccEEEEcCCC
Q 002984 344 D---IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRI-NEVYGSPNYEPVVLIDRPV 419 (861)
Q Consensus 344 d---~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~I-N~~~~~~~~~pvv~~~~~v 419 (861)
. ..|++...++|++++.+++ +++ +|... ++ .+++.++ +. +- .+ .. +-+.+.+++
T Consensus 214 e~~~~~~~l~~ll~al~~l~~~~-~~~----vv~p~------~p---~~~~~l~----~~~~~-~~--~~-~~v~l~~~l 271 (385)
T 4hwg_A 214 ENVDVKNNLKELLNSLQMLIKEY-NFL----IIFST------HP---RTKKRLE----DLEGF-KE--LG-DKIRFLPAF 271 (385)
T ss_dssp -----CHHHHHHHHHHHHHHHHH-CCE----EEEEE------CH---HHHHHHH----TSGGG-GG--TG-GGEEECCCC
T ss_pred hhcCcHHHHHHHHHHHHHHHhcC-CeE----EEEEC------Ch---HHHHHHH----HHHHH-hc--CC-CCEEEEcCC
Confidence 4 4488999999999998766 543 33322 12 2233222 21 10 11 11 345566788
Q ss_pred CHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec-cCCCCcccC--CCceEeCC
Q 002984 420 PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-EFIGCSPSL--SGAIRVNP 496 (861)
Q Consensus 420 ~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l--~~ai~vnP 496 (861)
+..++..+|+.||+++..| |.+..||++++.| +|+. +.++..+.+ +.+++|.+
T Consensus 272 g~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~P-------------------vv~~~~~ter~e~v~~G~~~lv~~ 327 (385)
T 4hwg_A 272 SFTDYVKLQMNAFCILSDS-----GTITEEASILNLP-------------------ALNIREAHERPEGMDAGTLIMSGF 327 (385)
T ss_dssp CHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTCC-------------------EEECSSSCSCTHHHHHTCCEECCS
T ss_pred CHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCCC-------------------EEEcCCCccchhhhhcCceEEcCC
Confidence 8999999999999999777 4467999999554 4543 333333334 33566654
Q ss_pred CCHHHHHHHHHHHhcCC
Q 002984 497 WDIDAVADAMTLAINMR 513 (861)
Q Consensus 497 ~d~~~~A~ai~~aL~m~ 513 (861)
|.+++++++.++|+.+
T Consensus 328 -d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 328 -KAERVLQAVKTITEEH 343 (385)
T ss_dssp -SHHHHHHHHHHHHTTC
T ss_pred -CHHHHHHHHHHHHhCh
Confidence 9999999999999754
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.56 E-value=4.1e-08 Score=98.66 Aligned_cols=67 Identities=10% Similarity=0.006 Sum_probs=53.9
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC-CC----CcccceecCCHhH
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG-RK----PSKAKYYLDDATD 831 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~----~s~Aky~l~d~~e 831 (861)
.|+.+++.+++++ | ++++++|||+.||+.|.+.+|.. ++.+..| +. ...|++++++..+
T Consensus 129 p~~~~~~~~~~~~---~--~~~~~~vGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~e 192 (201)
T 2w43_A 129 PSPKVYKYFLDSI---G--AKEAFLVSSNAFDVIGAKNAGMR-----------SIFVNRKNTIVDPIGGKPDVIVNDFKE 192 (201)
T ss_dssp TCHHHHHHHHHHH---T--CSCCEEEESCHHHHHHHHHTTCE-----------EEEECSSSCCCCTTSCCCSEEESSHHH
T ss_pred CCHHHHHHHHHhc---C--CCcEEEEeCCHHHhHHHHHCCCE-----------EEEECCCCCCccccCCCCCEEECCHHH
Confidence 3599999999999 7 89999999999999999999973 2344443 22 2368899999999
Q ss_pred HHHHHHHH
Q 002984 832 VLKLLQGL 839 (861)
Q Consensus 832 V~~~L~~L 839 (861)
+.++|..+
T Consensus 193 l~~~l~~~ 200 (201)
T 2w43_A 193 LYEWILRY 200 (201)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99888764
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.55 E-value=5.1e-07 Score=92.69 Aligned_cols=40 Identities=18% Similarity=0.135 Sum_probs=36.2
Q ss_pred CCCHHHHHHHHHHHhhcCC---CCCCeEEEEeCCcchHHHHHHccc
Q 002984 755 GVSKGLVAEKVLVRMFNGG---RPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~g---i~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+..|...++.+++++ | +++++|++|||+.||++|++.+|.
T Consensus 157 ~~~K~~~~~~~~~~~---~~~~~~~~~~~~vGDs~~D~~~~~~ag~ 199 (232)
T 3fvv_A 157 REGKVVRVNQWLAGM---GLALGDFAESYFYSDSVNDVPLLEAVTR 199 (232)
T ss_dssp THHHHHHHHHHHHHT---TCCGGGSSEEEEEECCGGGHHHHHHSSE
T ss_pred chHHHHHHHHHHHHc---CCCcCchhheEEEeCCHhhHHHHHhCCC
Confidence 345888899999988 8 899999999999999999999996
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.1e-07 Score=99.56 Aligned_cols=67 Identities=16% Similarity=0.175 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC--CcccceecCCHhHH-HH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK--PSKAKYYLDDATDV-LK 834 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~s~Aky~l~d~~eV-~~ 834 (861)
+......+++++ |++|++|++|||+.+|+.+.+.+|. .+|.|++. ...|+|++++..|+ .+
T Consensus 172 ~p~~~~~a~~~l---g~~p~e~l~VGDs~~Di~aA~~aG~-------------~~i~v~~~~~~~~ad~vi~~l~eL~~~ 235 (250)
T 4gib_A 172 HPEIFLMSAKGL---NVNPQNCIGIEDASAGIDAINSANM-------------FSVGVGNYENLKKANLVVDSTNQLKFE 235 (250)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTC-------------EEEEESCTTTTTTSSEEESSGGGCCHH
T ss_pred cHHHHHHHHHHh---CCChHHeEEECCCHHHHHHHHHcCC-------------EEEEECChhHhccCCEEECChHhCCHH
Confidence 567899999999 9999999999999999999999997 36677654 46799999998887 56
Q ss_pred HHHHHH
Q 002984 835 LLQGLA 840 (861)
Q Consensus 835 ~L~~L~ 840 (861)
.|+++.
T Consensus 236 ~i~~~~ 241 (250)
T 4gib_A 236 YIQEKY 241 (250)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665543
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.49 E-value=8.5e-07 Score=97.20 Aligned_cols=73 Identities=16% Similarity=0.103 Sum_probs=59.7
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---Ccccceec--CCHh
Q 002984 756 VSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK---PSKAKYYL--DDAT 830 (861)
Q Consensus 756 vsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~Aky~l--~d~~ 830 (861)
..|+.+++.+++++ |++++++++|||+.||++|++.+|. +|++... +..|++++ ++.+
T Consensus 244 kpk~~~~~~~~~~l---gi~~~~~v~vGDs~nDi~~a~~aG~--------------~va~~~~~~~~~~a~~v~~~~~l~ 306 (335)
T 3n28_A 244 QTKADILLTLAQQY---DVEIHNTVAVGDGANDLVMMAAAGL--------------GVAYHAKPKVEAKAQTAVRFAGLG 306 (335)
T ss_dssp HHHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEEESCCHHHHTTSSEEESSSCTH
T ss_pred hhhHHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCC--------------eEEeCCCHHHHhhCCEEEecCCHH
Confidence 36999999999999 9999999999999999999999996 5556322 35677765 5689
Q ss_pred HHHHHHHHHHhhcCC
Q 002984 831 DVLKLLQGLATASSS 845 (861)
Q Consensus 831 eV~~~L~~L~~~~~~ 845 (861)
+|+.+|+.......+
T Consensus 307 ~v~~~L~~~l~~~~r 321 (335)
T 3n28_A 307 GVVCILSAALVAQQK 321 (335)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHhHHHHhhh
Confidence 999999988765443
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.47 E-value=1.4e-07 Score=89.91 Aligned_cols=58 Identities=26% Similarity=0.363 Sum_probs=45.3
Q ss_pred cceEEEecCCccccCCCC-CCCCCCHHHHHHHHHhhcCCCCeEEEECCCC---hhhHHHHhcc
Q 002984 590 ERRAIFLDYDGTVVPETS-IIKSPGPEVISVLKTLCSDPNNTVFIVSGRG---RSSLSEWLAP 648 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~-~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~---~~~l~~~~~~ 648 (861)
.+|+|++|+||||++... .-..+.+.++++|+++ ++.|+.|+|+|||+ ...+..|+..
T Consensus 2 ~~k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l-~~~G~~iii~TgR~~~~~~~~~~~l~~ 63 (142)
T 2obb_A 2 NAMTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLL-QQEKHRLILWSVREGELLDEAIEWCRA 63 (142)
T ss_dssp CCCEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHH-HHTTCEEEECCSCCHHHHHHHHHHHHT
T ss_pred CCeEEEEECcCCCCCCCCccccccCHHHHHHHHHH-HHCCCEEEEEeCCCcccHHHHHHHHHH
Confidence 368999999999999321 0113457899999999 79999999999998 5666777754
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=6.8e-07 Score=98.19 Aligned_cols=247 Identities=12% Similarity=0.064 Sum_probs=147.1
Q ss_pred HHHHcCCCCCEEEEeCccccc--HHH-HHHhh-cCCCeEEEEEecCCCChHHHhcCCch-HHHHHHhhcCCEEeecChHh
Q 002984 191 VMEVINPDDDCVWVHDYHLMV--LPT-FLRKR-FNRIKLGFFLHSPFPSSEIYRTLPVR-DEILRGLLNCDLIGFHTFDY 265 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~l--lp~-~lr~~-~~~~~i~~flH~PfP~~e~f~~lp~r-~~il~~ll~~dligF~t~~~ 265 (861)
++..+++ +|+|.+|-..+.. .+. ++++. ..++|+.+..|-=||-.-. .-+.. ..-...+-.||.|..++...
T Consensus 68 ~~~~~~~-~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~--~~~~~~~~E~~~y~~aD~Ii~~S~~~ 144 (339)
T 3rhz_A 68 IVAGLRH-GDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFS--GNFYLMDRTIAYYNKADVVVAPSQKM 144 (339)
T ss_dssp HTTTCCT-TCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCG--GGGGGHHHHHHHHTTCSEEEESCHHH
T ss_pred HHhcCCC-CCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCc--cchhhHHHHHHHHHHCCEEEECCHHH
Confidence 4455665 4999998666532 222 33331 2289999999987763210 00011 11122345689999999876
Q ss_pred HHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccC-CchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcc
Q 002984 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGV-HMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMD 344 (861)
Q Consensus 266 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld 344 (861)
.+.+.+ .|+.. .+| .+.++ |... ..+. ....++++|+++||+.
T Consensus 145 ~~~l~~-----~G~~~---------------~ki--~~~~~~~~~~-----~~~~---------~~~~~~~~i~yaG~l~ 188 (339)
T 3rhz_A 145 IDKLRD-----FGMNV---------------SKT--VVQGMWDHPT-----QAPM---------FPAGLKREIHFPGNPE 188 (339)
T ss_dssp HHHHHH-----TTCCC---------------SEE--EECCSCCCCC-----CCCC---------CCCEEEEEEEECSCTT
T ss_pred HHHHHH-----cCCCc---------------Cce--eecCCCCccC-----cccc---------cccCCCcEEEEeCCcc
Confidence 665544 13320 111 12232 1110 0000 0113468899999998
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHH
Q 002984 345 IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEK 424 (861)
Q Consensus 345 ~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el 424 (861)
...++. + + .|+++ |+.+|... +. + . . -+.|.|.+|.+|+
T Consensus 189 k~~~L~----~---l---~~~~~----f~ivG~G~-----~~----------------~---l--~-nV~f~G~~~~~el 227 (339)
T 3rhz_A 189 RFSFVK----E---W---KYDIP----LKVYTWQN-----VE----------------L---P--Q-NVHKINYRPDEQL 227 (339)
T ss_dssp TCGGGG----G---C---CCSSC----EEEEESCC-----CC----------------C---C--T-TEEEEECCCHHHH
T ss_pred hhhHHH----h---C---CCCCe----EEEEeCCc-----cc----------------C---c--C-CEEEeCCCCHHHH
Confidence 532221 1 1 46665 88888533 20 0 1 1 2456789999999
Q ss_pred HHHHHhcccceecccccC---------CCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC---CCce
Q 002984 425 SAYYAVAECCIVNAVRDG---------MNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL---SGAI 492 (861)
Q Consensus 425 ~aly~~ADv~vvtS~~EG---------~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~ai 492 (861)
..+|+.||+.++. .++ ++....||||| |.|+|++..++..+.+ ..|+
T Consensus 228 ~~~l~~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~-------------------G~PVI~~~~~~~~~~v~~~~~G~ 286 (339)
T 3rhz_A 228 LMEMSQGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAA-------------------GIPVIVQEGIANQELIENNGLGW 286 (339)
T ss_dssp HHHHHTEEEEECC--CCGGGHHHHTTCCCHHHHHHHHH-------------------TCCEEEETTCTTTHHHHHHTCEE
T ss_pred HHHHHhCCEEEEE--CCCchhHHHHhcChHHHHHHHHc-------------------CCCEEEccChhHHHHHHhCCeEE
Confidence 9999999988886 233 46678999999 4568999988887777 3367
Q ss_pred EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHH
Q 002984 493 RVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQD 543 (861)
Q Consensus 493 ~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~ 543 (861)
.++ +.++++++|.. |.+++++.+.++.+++.......+.+++-+.+
T Consensus 287 ~~~--~~~e~~~~i~~---l~~~~~~~m~~na~~~a~~~~~~~f~k~~l~~ 332 (339)
T 3rhz_A 287 IVK--DVEEAIMKVKN---VNEDEYIELVKNVRSFNPILRKGFFTRRLLTE 332 (339)
T ss_dssp EES--SHHHHHHHHHH---CCHHHHHHHHHHHHHHTHHHHTTHHHHHHHHH
T ss_pred EeC--CHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 776 58888888876 45667766666666665554444555444433
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.8e-07 Score=98.52 Aligned_cols=80 Identities=14% Similarity=0.037 Sum_probs=61.7
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCCCC-------ccccee
Q 002984 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGRKP-------SKAKYY 825 (861)
Q Consensus 754 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-------s~Aky~ 825 (861)
.+..|..+++.+++++ |++++++++|||+. ||+.|.+.+|.. ++.+..|... ..|.|+
T Consensus 159 ~~Kp~~~~~~~~~~~~---g~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~i~~~~~~~~~~~~~~~~~ad~v 224 (263)
T 3k1z_A 159 WPKPDPRIFQEALRLA---HMEPVVAAHVGDNYLCDYQGPRAVGMH-----------SFLVVGPQALDPVVRDSVPKEHI 224 (263)
T ss_dssp SCTTSHHHHHHHHHHH---TCCGGGEEEEESCHHHHTHHHHTTTCE-----------EEEECCSSCCCHHHHHHSCGGGE
T ss_pred CCCCCHHHHHHHHHHc---CCCHHHEEEECCCcHHHHHHHHHCCCE-----------EEEEcCCCCCchhhcccCCCceE
Confidence 4455789999999999 99999999999996 999999999973 2333334322 268999
Q ss_pred cCCHhHHHHHHHHHHhhcCCCC
Q 002984 826 LDDATDVLKLLQGLATASSSKP 847 (861)
Q Consensus 826 l~d~~eV~~~L~~L~~~~~~~~ 847 (861)
+++..++.++|+.+...+....
T Consensus 225 ~~~l~el~~~l~~~~~~~~~~~ 246 (263)
T 3k1z_A 225 LPSLAHLLPALDCLEGSAENLY 246 (263)
T ss_dssp ESSGGGHHHHHHHHHHC-----
T ss_pred eCCHHHHHHHHHHHHhcCCCCc
Confidence 9999999999999987665544
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.40 E-value=1.8e-07 Score=87.52 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=42.8
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHh
Q 002984 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWL 646 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~ 646 (861)
+|+|+||+||||.+ ...+.+.+.++|++| ++.|+.++|+|+++...+..++
T Consensus 2 ~k~i~~D~DgtL~~----~~~~~~~~~~~l~~L-~~~G~~~~i~S~~~~~~~~~~l 52 (137)
T 2pr7_A 2 MRGLIVDYAGVLDG----TDEDQRRWRNLLAAA-KKNGVGTVILSNDPGGLGAAPI 52 (137)
T ss_dssp CCEEEECSTTTTSS----CHHHHHHHHHHHHHH-HHTTCEEEEEECSCCGGGGHHH
T ss_pred CcEEEEeccceecC----CCccCccHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHH
Confidence 58999999999954 445678899999999 7889999999999887766655
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.40 E-value=4.6e-07 Score=98.68 Aligned_cols=64 Identities=19% Similarity=0.229 Sum_probs=50.6
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC---cccceec--CCHhH
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP---SKAKYYL--DDATD 831 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~---s~Aky~l--~d~~e 831 (861)
.|..+++.+++++ |++++++++|||+.||++|++.+|. +++++..+ ..|++.+ ++..+
T Consensus 246 pkp~~~~~~~~~l---gv~~~~~i~VGDs~~Di~aa~~AG~--------------~va~~~~~~~~~~a~~~i~~~~L~~ 308 (317)
T 4eze_A 246 NKKQTLVDLAARL---NIATENIIACGDGANDLPMLEHAGT--------------GIAWKAKPVVREKIHHQINYHGFEL 308 (317)
T ss_dssp HHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEEESCCHHHHHHCCEEESSSCGGG
T ss_pred CCHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHCCC--------------eEEeCCCHHHHHhcCeeeCCCCHHH
Confidence 4889999999999 9999999999999999999999996 56665432 4556655 36666
Q ss_pred HHHHHH
Q 002984 832 VLKLLQ 837 (861)
Q Consensus 832 V~~~L~ 837 (861)
++.+|+
T Consensus 309 ll~~L~ 314 (317)
T 4eze_A 309 LLFLIE 314 (317)
T ss_dssp GGGGTC
T ss_pred HHHHHH
Confidence 666553
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=98.39 E-value=5.8e-07 Score=96.27 Aligned_cols=141 Identities=17% Similarity=0.190 Sum_probs=102.5
Q ss_pred HHHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCc
Q 002984 580 DHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHG 659 (861)
Q Consensus 580 ~~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG 659 (861)
+.....|.....+++++|+|+++...-.....+.+.+.++|+.| ++.|+.++|+||++...+..++..+ ++.
T Consensus 132 ~~~~~~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L-~~~g~~~~i~T~~~~~~~~~~l~~~---gl~---- 203 (287)
T 3a1c_A 132 ELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISREL---NLD---- 203 (287)
T ss_dssp HHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHH---TCS----
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHh---CCc----
Confidence 45566777777899999999998752112346778999999999 7899999999999999888877432 220
Q ss_pred EEEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCC
Q 002984 660 YFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEP 739 (861)
Q Consensus 660 ~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~ 739 (861)
.+ +.
T Consensus 204 ---------------------------------------~~-----------f~-------------------------- 207 (287)
T 3a1c_A 204 ---------------------------------------LV-----------IA-------------------------- 207 (287)
T ss_dssp ---------------------------------------EE-----------EC--------------------------
T ss_pred ---------------------------------------ee-----------ee--------------------------
Confidence 00 00
Q ss_pred EEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC-
Q 002984 740 AVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK- 818 (861)
Q Consensus 740 ~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~- 818 (861)
++.| .+|..+++ .+ +.. ++|++|||+.||+.|++.+|. +|++|+.
T Consensus 208 ----------~i~~--~~K~~~~~----~l---~~~-~~~~~vGDs~~Di~~a~~ag~--------------~v~~~~~~ 253 (287)
T 3a1c_A 208 ----------EVLP--HQKSEEVK----KL---QAK-EVVAFVGDGINDAPALAQADL--------------GIAVGSGS 253 (287)
T ss_dssp ----------SCCT--TCHHHHHH----HH---TTT-CCEEEEECTTTCHHHHHHSSE--------------EEEECCCS
T ss_pred ----------ecCh--HHHHHHHH----HH---hcC-CeEEEEECCHHHHHHHHHCCe--------------eEEeCCCC
Confidence 0012 25755544 44 677 999999999999999999996 5667754
Q ss_pred ---Ccccceec--CCHhHHHHHHHH
Q 002984 819 ---PSKAKYYL--DDATDVLKLLQG 838 (861)
Q Consensus 819 ---~s~Aky~l--~d~~eV~~~L~~ 838 (861)
...|++++ ++..++.++|+.
T Consensus 254 ~~~~~~ad~v~~~~~~~~l~~~l~~ 278 (287)
T 3a1c_A 254 DVAVESGDIVLIRDDLRDVVAAIQL 278 (287)
T ss_dssp CCSSCCSSEEESSSCTHHHHHHHHT
T ss_pred HHHHhhCCEEEeCCCHHHHHHHHHH
Confidence 35688999 889998887753
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=98.38 E-value=4e-08 Score=99.84 Aligned_cols=69 Identities=17% Similarity=0.199 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC-----cccceecCCHhHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP-----SKAKYYLDDATDV 832 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-----s~Aky~l~d~~eV 832 (861)
+....+.+++++ |++|+++++|||+.+|+.+.+.+|.. .+++|+.|..+ ......+.+++++
T Consensus 142 ~p~~~~~a~~~l---g~~p~e~l~VgDs~~Di~aA~~aG~~----------~i~~v~~g~~~~~~l~~~~~~~i~~~~el 208 (216)
T 3kbb_A 142 DPEIYLLVLERL---NVVPEKVVVFEDSKSGVEAAKSAGIE----------RIYGVVHSLNDGKALLEAGAVALVKPEEI 208 (216)
T ss_dssp STHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTCC----------CEEEECCSSSCCHHHHHTTCSEEECGGGH
T ss_pred cHHHHHHHHHhh---CCCccceEEEecCHHHHHHHHHcCCc----------EEEEecCCCCCHHHHHhCCCcEECCHHHH
Confidence 567899999999 99999999999999999999999973 23467777532 1223445578999
Q ss_pred HHHHHHH
Q 002984 833 LKLLQGL 839 (861)
Q Consensus 833 ~~~L~~L 839 (861)
++.|+.|
T Consensus 209 i~~l~eL 215 (216)
T 3kbb_A 209 LNVLKEV 215 (216)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999876
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.35 E-value=8e-07 Score=100.48 Aligned_cols=65 Identities=26% Similarity=0.242 Sum_probs=53.4
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---CcccceecC--CHh
Q 002984 756 VSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK---PSKAKYYLD--DAT 830 (861)
Q Consensus 756 vsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~Aky~l~--d~~ 830 (861)
..|..+++.+++++ |++++++++|||+.||++|++.+|. +++++.+ ...|++.++ +.+
T Consensus 322 kpk~~~~~~~~~~~---gi~~~~~i~vGD~~~Di~~a~~aG~--------------~va~~~~~~~~~~ad~~i~~~~l~ 384 (415)
T 3p96_A 322 AGKATALREFAQRA---GVPMAQTVAVGDGANDIDMLAAAGL--------------GIAFNAKPALREVADASLSHPYLD 384 (415)
T ss_dssp HHHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEEESCCHHHHHHCSEEECSSCTT
T ss_pred cchHHHHHHHHHHc---CcChhhEEEEECCHHHHHHHHHCCC--------------eEEECCCHHHHHhCCEEEccCCHH
Confidence 34899999999999 9999999999999999999999996 5666443 356788765 567
Q ss_pred HHHHHHH
Q 002984 831 DVLKLLQ 837 (861)
Q Consensus 831 eV~~~L~ 837 (861)
+++.+|.
T Consensus 385 ~ll~~l~ 391 (415)
T 3p96_A 385 TVLFLLG 391 (415)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 7777664
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=98.34 E-value=3.2e-06 Score=90.00 Aligned_cols=56 Identities=18% Similarity=0.252 Sum_probs=46.0
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECC---CChhhHHHHhccc
Q 002984 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG---RGRSSLSEWLAPC 649 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TG---R~~~~l~~~~~~~ 649 (861)
.++|+|+||+||||++ ... +.+.+.++|+++ ++.|+.++++|| |+...+.+.+..+
T Consensus 12 ~~~k~i~~D~DGtL~~---~~~-~~~~~~~~l~~l-~~~g~~~~~~Tn~~~r~~~~~~~~l~~l 70 (284)
T 2hx1_A 12 PKYKCIFFDAFGVLKT---YNG-LLPGIENTFDYL-KAQGQDYYIVTNDASRSPEQLADSYHKL 70 (284)
T ss_dssp GGCSEEEECSBTTTEE---TTE-ECTTHHHHHHHH-HHTTCEEEEEECCCSSCHHHHHHHHHHT
T ss_pred hcCCEEEEcCcCCcCc---CCe-eChhHHHHHHHH-HHCCCEEEEEeCCCCcCHHHHHHHHHHC
Confidence 3579999999999998 433 567899999999 789999999995 8888777776543
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.31 E-value=2.5e-07 Score=94.60 Aligned_cols=62 Identities=21% Similarity=0.320 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC------cccceecCCHh
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP------SKAKYYLDDAT 830 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------s~Aky~l~d~~ 830 (861)
.|..+++++++++ |+ +++++|||+.||+.|.+.+|. +|.+|... ..|.+++++..
T Consensus 157 ~Kp~~~~~~~~~~---~~--~~~~~vGDs~~Di~~a~~ag~--------------~i~~~~~~~~~~~~~~~~~~~~~~~ 217 (225)
T 1nnl_A 157 GKGKVIKLLKEKF---HF--KKIIMIGDGATDMEACPPADA--------------FIGFGGNVIRQQVKDNAKWYITDFV 217 (225)
T ss_dssp HHHHHHHHHHHHH---CC--SCEEEEESSHHHHTTTTTSSE--------------EEEECSSCCCHHHHHHCSEEESCGG
T ss_pred chHHHHHHHHHHc---CC--CcEEEEeCcHHhHHHHHhCCe--------------EEEecCccccHHHHhcCCeeecCHH
Confidence 5889999999998 76 789999999999999999874 56676532 35788899888
Q ss_pred HHHHHHH
Q 002984 831 DVLKLLQ 837 (861)
Q Consensus 831 eV~~~L~ 837 (861)
++.++|+
T Consensus 218 el~~~l~ 224 (225)
T 1nnl_A 218 ELLGELE 224 (225)
T ss_dssp GGCC---
T ss_pred HHHHHHh
Confidence 8876653
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.2e-06 Score=104.32 Aligned_cols=140 Identities=19% Similarity=0.209 Sum_probs=105.2
Q ss_pred HHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcE
Q 002984 581 HIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660 (861)
Q Consensus 581 ~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~ 660 (861)
...+.+.....+.+++.+||+++..-....++.+++.++|++| ++.|++++++||++...+..+.+.+ |+.
T Consensus 427 ~~~~~~~~~g~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L-~~~Gi~v~~~TGd~~~~a~~ia~~l---gi~----- 497 (645)
T 3j08_A 427 LALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISREL---NLD----- 497 (645)
T ss_dssp HHHHHHHTTTCCCEEEEETTEEEEEEEEECCCTTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHH---TCS-----
T ss_pred HHHHHHHhcCCeEEEEEECCEEEEEEEecCCchhHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHc---CCC-----
Confidence 3345566667788999999998752223456889999999999 7999999999999999998887543 220
Q ss_pred EEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCE
Q 002984 661 FIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPA 740 (861)
Q Consensus 661 ~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~ 740 (861)
T Consensus 498 -------------------------------------------------------------------------------- 497 (645)
T 3j08_A 498 -------------------------------------------------------------------------------- 497 (645)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC--
Q 002984 741 VVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK-- 818 (861)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-- 818 (861)
..+.++.|. +|+.+++.+.+ . +.++++||+.||.+|++.++. +|++|++
T Consensus 498 -----~~~~~~~P~--~K~~~v~~l~~-------~-~~v~~vGDg~ND~~al~~A~v--------------giamg~g~~ 548 (645)
T 3j08_A 498 -----LVIAEVLPH--QKSEEVKKLQA-------K-EVVAFVGDGINDAPALAQADL--------------GIAVGSGSD 548 (645)
T ss_dssp -----EEECSCCTT--CHHHHHHHHTT-------T-CCEEEEECSSSCHHHHHHSSE--------------EEEECCCSC
T ss_pred -----EEEEeCCHH--hHHHHHHHHhh-------C-CeEEEEeCCHhHHHHHHhCCE--------------EEEeCCCcH
Confidence 001122233 69998888743 2 789999999999999999985 7888875
Q ss_pred --Ccccceec--CCHhHHHHHHHH
Q 002984 819 --PSKAKYYL--DDATDVLKLLQG 838 (861)
Q Consensus 819 --~s~Aky~l--~d~~eV~~~L~~ 838 (861)
+..|++++ ++.+++.++++.
T Consensus 549 ~a~~~AD~vl~~~~~~~i~~~i~~ 572 (645)
T 3j08_A 549 VAVESGDIVLIRDDLRDVVAAIQL 572 (645)
T ss_dssp CSSCCSSSEESSCCTTHHHHHHHH
T ss_pred HHHHhCCEEEecCCHHHHHHHHHH
Confidence 46788888 678888877763
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.22 E-value=2.9e-07 Score=91.06 Aligned_cols=40 Identities=8% Similarity=-0.124 Sum_probs=36.3
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 753 PQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+.+..|+.+++.+++++ |++ ++++|||+.||++|++.+|.
T Consensus 134 ~~~kp~~~~~~~~~~~~---~~~--~~~~iGD~~~Di~~a~~aG~ 173 (190)
T 2fi1_A 134 FKRKPNPESMLYLREKY---QIS--SGLVIGDRPIDIEAGQAAGL 173 (190)
T ss_dssp CCCTTSCHHHHHHHHHT---TCS--SEEEEESSHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHc---CCC--eEEEEcCCHHHHHHHHHcCC
Confidence 44567899999999999 887 99999999999999999997
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.21 E-value=3.7e-06 Score=84.53 Aligned_cols=69 Identities=12% Similarity=0.041 Sum_probs=49.7
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----ccccee-c
Q 002984 752 KPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYY-L 826 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~-l 826 (861)
+|+...|..+++.+ +..++++++|||+.||+.|++.+|. ++.++..+ ..+.+. +
T Consensus 128 ~p~p~~~~~~l~~l-------~~~~~~~~~iGD~~~Di~~a~~aG~--------------~~~~~~~~~~~~~~~~~~~~ 186 (206)
T 1rku_A 128 LRQKDPKRQSVIAF-------KSLYYRVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAV 186 (206)
T ss_dssp CCSSSHHHHHHHHH-------HHTTCEEEEEECSSTTHHHHHHSSE--------------EEEESCCHHHHHHCTTSCEE
T ss_pred cCCCchHHHHHHHH-------HhcCCEEEEEeCChhhHHHHHhcCc--------------cEEECCcHHHHHHHhhhccc
Confidence 47666666666554 5568899999999999999999996 34454331 233443 7
Q ss_pred CCHhHHHHHHHHHHh
Q 002984 827 DDATDVLKLLQGLAT 841 (861)
Q Consensus 827 ~d~~eV~~~L~~L~~ 841 (861)
++..++.++|+.+.+
T Consensus 187 ~~~~~l~~~l~~~~~ 201 (206)
T 1rku_A 187 HTYEDLKREFLKASS 201 (206)
T ss_dssp CSHHHHHHHHHHHCS
T ss_pred cchHHHHHHHHHHhc
Confidence 899999999887643
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.18 E-value=2.8e-06 Score=102.68 Aligned_cols=139 Identities=19% Similarity=0.221 Sum_probs=105.1
Q ss_pred HHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcE
Q 002984 581 HIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660 (861)
Q Consensus 581 ~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~ 660 (861)
...+.+.....+.+++..||+++..-....++.+++.+++++| ++.|+.++++||++...+..+.+.+ |+.
T Consensus 505 ~~~~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l-~~~Gi~v~~~TGd~~~~a~~ia~~l---gi~----- 575 (723)
T 3j09_A 505 LALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISREL---NLD----- 575 (723)
T ss_dssp HHHHHHHTTTCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHH---TCS-----
T ss_pred HHHHHHHhcCCeEEEEEECCEEEEEEeecCCcchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHc---CCc-----
Confidence 3445566677889999999998752223456889999999999 7999999999999999998887543 220
Q ss_pred EEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCE
Q 002984 661 FIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPA 740 (861)
Q Consensus 661 ~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~ 740 (861)
T Consensus 576 -------------------------------------------------------------------------------- 575 (723)
T 3j09_A 576 -------------------------------------------------------------------------------- 575 (723)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC--
Q 002984 741 VVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK-- 818 (861)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-- 818 (861)
..+.++.|. +|+.+++.+.+ . +.|+++||+.||.+|++.++. ++++|++
T Consensus 576 -----~~~~~~~P~--~K~~~v~~l~~-------~-~~v~~vGDg~ND~~al~~A~v--------------giamg~g~~ 626 (723)
T 3j09_A 576 -----LVIAEVLPH--QKSEEVKKLQA-------K-EVVAFVGDGINDAPALAQADL--------------GIAVGSGSD 626 (723)
T ss_dssp -----EEECSCCTT--CHHHHHHHHTT-------T-CCEEEEECSSTTHHHHHHSSE--------------EEECCCCSC
T ss_pred -----EEEccCCHH--HHHHHHHHHhc-------C-CeEEEEECChhhHHHHhhCCE--------------EEEeCCCcH
Confidence 001122232 59988888743 2 789999999999999999985 7888875
Q ss_pred --Ccccceec--CCHhHHHHHHH
Q 002984 819 --PSKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 819 --~s~Aky~l--~d~~eV~~~L~ 837 (861)
+..|++++ ++.+++.++++
T Consensus 627 ~a~~~AD~vl~~~~~~~i~~~i~ 649 (723)
T 3j09_A 627 VAVESGDIVLIRDDLRDVVAAIQ 649 (723)
T ss_dssp CSSCCSSEECSSCCTTHHHHHHH
T ss_pred HHHHhCCEEEeCCCHHHHHHHHH
Confidence 47788888 67888887776
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=98.14 E-value=1.4e-06 Score=81.34 Aligned_cols=47 Identities=21% Similarity=0.348 Sum_probs=40.8
Q ss_pred ceEEEecCCccccCCCCCCC------CCCHHHHHHHHHhhcCCCCeEEEECCCChhh
Q 002984 591 RRAIFLDYDGTVVPETSIIK------SPGPEVISVLKTLCSDPNNTVFIVSGRGRSS 641 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~------~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~ 641 (861)
+|+|+||+||||++ ... .+++.+.++|+++ +++|+.++++|||+...
T Consensus 1 ik~i~~DlDGTL~~---~~~~~~~~~~~~~~~~~~l~~l-~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQ---ANTSDYRNVLPRLDVIEQLREY-HQLGFEIVISTARNMRT 53 (126)
T ss_dssp CCEEEECSTTTTBC---CCCSCGGGCCBCHHHHHHHHHH-HHTTCEEEEEECTTTTT
T ss_pred CCEEEEecCCCCCC---CCCCccccCCCCHHHHHHHHHH-HhCCCeEEEEeCCChhh
Confidence 47999999999998 443 5779999999999 68899999999998754
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.07 E-value=2.3e-06 Score=103.11 Aligned_cols=139 Identities=15% Similarity=0.197 Sum_probs=102.5
Q ss_pred HHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEE
Q 002984 582 IVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYF 661 (861)
Q Consensus 582 ~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (861)
..+.+.....+.+++.+||+++..-....++.+++.++|++| ++.|+.++++||++...+..+.+.+ |+..
T Consensus 525 ~~~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L-~~~Gi~v~mlTGd~~~~a~~ia~~l---gi~~----- 595 (736)
T 3rfu_A 525 KADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILEL-QQSGIEIVMLTGDSKRTAEAVAGTL---GIKK----- 595 (736)
T ss_dssp HHHHHHHTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHH-HHHTCEEEEECSSCHHHHHHHHHHH---TCCC-----
T ss_pred HHHHHHhcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc---CCCE-----
Confidence 345666677899999999998752113456788999999999 7899999999999999999887543 3210
Q ss_pred EEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEE
Q 002984 662 IRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAV 741 (861)
Q Consensus 662 i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 741 (861)
.+
T Consensus 596 -------------------------------------------------v~----------------------------- 597 (736)
T 3rfu_A 596 -------------------------------------------------VV----------------------------- 597 (736)
T ss_dssp -------------------------------------------------EE-----------------------------
T ss_pred -------------------------------------------------EE-----------------------------
Confidence 00
Q ss_pred EEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---
Q 002984 742 VKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK--- 818 (861)
Q Consensus 742 v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 818 (861)
.++.|. +|...++.+.++ .+.|+++||+.||.+||+.++. +|++|++
T Consensus 598 -------a~~~P~--~K~~~v~~l~~~-------g~~V~~vGDG~ND~paL~~Adv--------------GIAmg~g~d~ 647 (736)
T 3rfu_A 598 -------AEIMPE--DKSRIVSELKDK-------GLIVAMAGDGVNDAPALAKADI--------------GIAMGTGTDV 647 (736)
T ss_dssp -------CSCCHH--HHHHHHHHHHHH-------SCCEEEEECSSTTHHHHHHSSE--------------EEEESSSCSH
T ss_pred -------EecCHH--HHHHHHHHHHhc-------CCEEEEEECChHhHHHHHhCCE--------------EEEeCCccHH
Confidence 011222 377777777654 2569999999999999999985 7889876
Q ss_pred -Ccccceec--CCHhHHHHHHH
Q 002984 819 -PSKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 819 -~s~Aky~l--~d~~eV~~~L~ 837 (861)
+..|++++ ++.+++.+.++
T Consensus 648 a~~~AD~vl~~~~~~~i~~ai~ 669 (736)
T 3rfu_A 648 AIESAGVTLLHGDLRGIAKARR 669 (736)
T ss_dssp HHHHCSEEECSCCSTTHHHHHH
T ss_pred HHHhCCEEEccCCHHHHHHHHH
Confidence 36788887 56777776665
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.05 E-value=6.3e-06 Score=82.23 Aligned_cols=38 Identities=11% Similarity=0.003 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.+...++.+++++ |++++++++|||+.||+.|.+.+|.
T Consensus 142 p~~~~~~~~~~~~---~~~~~~~~~vgD~~~Di~~a~~aG~ 179 (200)
T 3cnh_A 142 PNPAMYRLGLTLA---QVRPEEAVMVDDRLQNVQAARAVGM 179 (200)
T ss_dssp TCHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHc---CCCHHHeEEeCCCHHHHHHHHHCCC
Confidence 4567999999999 9999999999999999999999997
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.04 E-value=4.9e-06 Score=83.71 Aligned_cols=38 Identities=11% Similarity=0.137 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.+..+++.+++++ |++++++++|||+.||+.|++.+|.
T Consensus 151 p~~~~~~~~~~~~---~~~~~~~~~igD~~~Di~~a~~aG~ 188 (211)
T 2i6x_A 151 PNEDIFLEMIADS---GMKPEETLFIDDGPANVATAERLGF 188 (211)
T ss_dssp TSHHHHHHHHHHH---CCCGGGEEEECSCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHh---CCChHHeEEeCCCHHHHHHHHHcCC
Confidence 3567899999999 9999999999999999999999996
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.03 E-value=6.7e-06 Score=85.49 Aligned_cols=58 Identities=14% Similarity=0.179 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCcccceecCCHhH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATD 831 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~Aky~l~d~~e 831 (861)
.......+++++ |++|++|++|||+.+|+.+.+.+|. .+|.|+...+.|+..+++..+
T Consensus 151 ~p~~~~~a~~~l---g~~p~e~l~VgDs~~di~aA~~aG~-------------~~I~V~~g~~~ad~~~~~~~~ 208 (243)
T 4g9b_A 151 DPEIFLAACAGL---GVPPQACIGIEDAQAGIDAINASGM-------------RSVGIGAGLTGAQLLLPSTES 208 (243)
T ss_dssp STHHHHHHHHHH---TSCGGGEEEEESSHHHHHHHHHHTC-------------EEEEESTTCCSCSEEESSGGG
T ss_pred cHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCC-------------EEEEECCCCCcHHHhcCChhh
Confidence 467889999999 9999999999999999999999997 367777766778877766433
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=98.00 E-value=2.4e-05 Score=98.29 Aligned_cols=165 Identities=19% Similarity=0.265 Sum_probs=93.3
Q ss_pred CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHH
Q 002984 608 IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEP 687 (861)
Q Consensus 608 ~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~ 687 (861)
...++.+++.++|+++ ++.|+.|+++|||+...+..+... +|+..+++..+ .+....
T Consensus 601 i~Dp~r~~~~~aI~~l-~~aGI~vvmiTGd~~~tA~~ia~~---lgi~~~~~~~i-------------------~~~~~~ 657 (1034)
T 3ixz_A 601 MIDPPRATVPDAVLKC-RTAGIRVIMVTGDHPITAKAIAAS---VGIISEGSETV-------------------EDIAAR 657 (1034)
T ss_pred ccCCCchhHHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHH---cCCCCCCchHH-------------------HHHHHh
Confidence 3456889999999998 899999999999999999998854 45543222100 000000
Q ss_pred HHHHHhhcCCCceEeecc-ceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHH
Q 002984 688 VMRSYTEATDGSNIEIKE-SALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVL 766 (861)
Q Consensus 688 i~~~y~~~~~gs~ie~k~-~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll 766 (861)
.. .+......+. ......-. ++.....+++.+ .+......+ +..+.|. .|...++.+.
T Consensus 658 ----~~--~~~~~~~~~~~~~~~~~g~----~l~~~~~~~l~~----~~~~~~~~v-----~ar~~P~--~K~~iv~~lq 716 (1034)
T 3ixz_A 658 ----LR--VPVDQVNRKDARACVINGM----QLKDMDPSELVE----ALRTHPEMV-----FARTSPQ--QKLVIVESCQ 716 (1034)
T ss_pred ----hC--ccchhccccccceeEEecH----hhhhCCHHHHHH----HHHhCCceE-----EEecCHH--HHHHHHHHHH
Confidence 00 0000000000 00011000 000011122222 222221111 2233443 5887777664
Q ss_pred HHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC-CC----CcccceecC--CHhHHHHHHH
Q 002984 767 VRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG-RK----PSKAKYYLD--DATDVLKLLQ 837 (861)
Q Consensus 767 ~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~----~s~Aky~l~--d~~eV~~~L~ 837 (861)
+. | ..|+++||+.||.+||+.|+. +|+|| ++ +..|++++. +.++++..++
T Consensus 717 ~~----g---~~V~a~GDG~ND~~mLk~A~v--------------GIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~ 773 (1034)
T 3ixz_A 717 RL----G---AIVAVTGDGVNDSPALKKADI--------------GVAMGIAGSDAAKNAADMILLDDNFASIVTGVE 773 (1034)
T ss_pred Hc----C---CEEEEECCcHHhHHHHHHCCe--------------eEEeCCccCHHHHHhcCEEeccCCchHHHHHHH
Confidence 42 3 469999999999999999985 78888 64 578889884 4677777774
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=2.2e-05 Score=87.77 Aligned_cols=155 Identities=12% Similarity=0.066 Sum_probs=96.0
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002984 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pv 412 (861)
.+.+++++|++. .|+......+++.+ ++. +++ ++.++.+.. +.++++ ...+.
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l-~~~-~~~----~~~~~g~~~----~~~~l~-----------------~~~~~ 293 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGL-AGL-DAD----VLVASGPSL----DVSGLG-----------------EVPAN 293 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHH-HTS-SSE----EEEECCSSC----CCTTCC-----------------CCCTT
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHH-HcC-CCE----EEEEECCCC----Chhhhc-----------------cCCCc
Confidence 456889999996 66766666666555 333 222 444443221 001110 01123
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCC----CcccC
Q 002984 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CSPSL 488 (861)
Q Consensus 413 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l 488 (861)
+.+.+.++ +..+|+.||+||.+| |. .+.+|||+|+ .|+|+.-..+ .++.+
T Consensus 294 v~~~~~~~---~~~~l~~ad~~v~~~---g~-~t~~Ea~a~G-------------------~P~v~~p~~~~q~~~~~~v 347 (412)
T 3otg_A 294 VRLESWVP---QAALLPHVDLVVHHG---GS-GTTLGALGAG-------------------VPQLSFPWAGDSFANAQAV 347 (412)
T ss_dssp EEEESCCC---HHHHGGGCSEEEESC---CH-HHHHHHHHHT-------------------CCEEECCCSTTHHHHHHHH
T ss_pred EEEeCCCC---HHHHHhcCcEEEECC---ch-HHHHHHHHhC-------------------CCEEecCCchhHHHHHHHH
Confidence 45666664 778899999999766 32 5889999994 4467744433 45545
Q ss_pred ---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHH
Q 002984 489 ---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQ 542 (861)
Q Consensus 489 ---~~ai~vnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~ 542 (861)
..|++++|. |.++++++|.++|+. ++.++...+...++...++....++.+.+
T Consensus 348 ~~~g~g~~~~~~~~~~~~l~~ai~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (412)
T 3otg_A 348 AQAGAGDHLLPDNISPDSVSGAAKRLLAE-ESYRAGARAVAAEIAAMPGPDEVVRLLPG 405 (412)
T ss_dssp HHHTSEEECCGGGCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHSCCHHHHHTTHHH
T ss_pred HHcCCEEecCcccCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 347888887 899999999999984 34444445555566666766666555443
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.95 E-value=1.3e-06 Score=87.63 Aligned_cols=37 Identities=14% Similarity=0.140 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+..+++.+++++ |++++++++|||+.||+.|.+.+|.
T Consensus 150 ~~~~~~~~~~~~---~~~~~~~~~vgD~~~Di~~a~~aG~ 186 (206)
T 2b0c_A 150 EARIYQHVLQAE---GFSPSDTVFFDDNADNIEGANQLGI 186 (206)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHc---CCCHHHeEEeCCCHHHHHHHHHcCC
Confidence 356889999999 9999999999999999999999996
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.90 E-value=1.6e-05 Score=81.39 Aligned_cols=37 Identities=11% Similarity=0.098 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+..+++.+++++ |++++++++|||+.||+.|.+.+|.
T Consensus 175 ~~~~~~~~~~~~---g~~~~~~~~vGD~~~Di~~a~~aG~ 211 (229)
T 4dcc_A 175 EPEIFKAVTEDA---GIDPKETFFIDDSEINCKVAQELGI 211 (229)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEECSCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHc---CCCHHHeEEECCCHHHHHHHHHcCC
Confidence 458899999999 9999999999999999999999997
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=5.2e-05 Score=90.09 Aligned_cols=147 Identities=13% Similarity=0.059 Sum_probs=103.4
Q ss_pred CCeEEEeecCcccccCHHH-HHHHHHHHHH--hCCCCC-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 002984 333 GKKLILGIDDMDIFKGISL-KLLAMEQLLQ--QHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN 408 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~-~l~Af~~ll~--~~P~~~-~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~ 408 (861)
+..+++.|.|+...||..+ .+..++++++ .+|+.. ..+++|..|....+. .....+-+.+.++++.||.. +.
T Consensus 525 d~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~D---p~ 600 (796)
T 1l5w_A 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINND---PL 600 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTC---TT
T ss_pred CcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHHhccc---cc
Confidence 5688999999999999999 8888888765 456521 247777766544222 23345667788888888863 33
Q ss_pred ccc--EEEEcCCCCHHHHHHHHHhcccceeccc--ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCC
Q 002984 409 YEP--VVLIDRPVPRFEKSAYYAVAECCIVNAV--RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC 484 (861)
Q Consensus 409 ~~p--vv~~~~~v~~~el~aly~~ADv~vvtS~--~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~ 484 (861)
+.. .+.|....+..--..+|.+||+++.||. .|.-|+.-+-+|.- |+|-+|..-|+
T Consensus 601 ~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N--------------------GaL~iGtLDGa 660 (796)
T 1l5w_A 601 VGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN--------------------GALTVGTLDGA 660 (796)
T ss_dssp TGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT--------------------TCEEEECSCTT
T ss_pred cCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc--------------------CCeeecCcCCe
Confidence 444 3344445566666689999999999999 88888877777763 55666777777
Q ss_pred cccC------CCceEeCCCCHHHHHH
Q 002984 485 SPSL------SGAIRVNPWDIDAVAD 504 (861)
Q Consensus 485 ~~~l------~~ai~vnP~d~~~~A~ 504 (861)
-.++ .+++++-. +.+++.+
T Consensus 661 nvEi~e~vG~~NgF~FG~-~~~ev~~ 685 (796)
T 1l5w_A 661 NVEIAEKVGEENIFIFGH-TVEQVKA 685 (796)
T ss_dssp HHHHHHHHCGGGSEECSC-CHHHHHH
T ss_pred eeehhhccCCCcEEEecC-CHHHHHH
Confidence 6554 24788876 7777763
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=1e-05 Score=79.91 Aligned_cols=51 Identities=22% Similarity=0.397 Sum_probs=38.9
Q ss_pred HhccceEEEecCCccccCCCC--------CCCCCCHHHHHHHHHhhcCCCCeEEEECCCC
Q 002984 587 RKTERRAIFLDYDGTVVPETS--------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (861)
Q Consensus 587 ~~s~~klI~~DlDGTLl~~~~--------~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~ 638 (861)
..+.+|+++||+||||+...+ ....+.+.+.++|+.| ++.|..++|+|+.+
T Consensus 10 ~~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L-~~~G~~l~i~Tn~~ 68 (176)
T 2fpr_A 10 HGSSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKL-QKAGYKLVMITNQD 68 (176)
T ss_dssp ---CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHH-HHTTEEEEEEEECT
T ss_pred cCCcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHH-HHCCCEEEEEECCc
Confidence 346789999999999987421 1234678999999999 68899999999874
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00021 Score=78.56 Aligned_cols=52 Identities=19% Similarity=0.298 Sum_probs=40.9
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCC---hhhHHHHh
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRG---RSSLSEWL 646 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~---~~~l~~~~ 646 (861)
+.+.++||+||||.. .. .+-+...++|+.| ++.|..++++|+.+ .....+.+
T Consensus 12 ~~~~~l~D~DGvl~~---g~-~~~p~a~~~l~~l-~~~g~~~~~vTNn~~~~~~~~~~~l 66 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFR---GK-KPIAGASDALKLL-NRNKIPYILLTNGGGFSERARTEFI 66 (352)
T ss_dssp CCEEEEECCBTTTEE---TT-EECTTHHHHHHHH-HHTTCCEEEECSCCSSCHHHHHHHH
T ss_pred cCCEEEEECCCeeEc---CC-eeCcCHHHHHHHH-HHCCCEEEEEeCCCCCCchHHHHHH
Confidence 689999999999998 33 3557888999999 78999999999654 45444443
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.71 E-value=2.9e-05 Score=90.42 Aligned_cols=174 Identities=7% Similarity=-0.104 Sum_probs=105.4
Q ss_pred CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE-EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002984 334 KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ-IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (861)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvq-i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pv 412 (861)
..++.+..|+ .|..+..++++.+++++.|+.+ .++. ++. +.+.. ..+.+++.+ ..| .+.
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~---L~l~~~g~---~~g~~-~~~~~~~~~--~GI---------~~R 500 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVKV---HFHFALGQ---SNGIT-HPYVERFIK--SYL---------GDS 500 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEE---EEEEEESS---CCGGG-HHHHHHHHH--HHH---------GGG
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcE---EEEEecCC---Cchhh-HHHHHHHHH--cCC---------Ccc
Confidence 5667777875 7999999999999999999742 2222 331 12332 222222221 122 134
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---
Q 002984 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS--- 489 (861)
Q Consensus 413 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--- 489 (861)
+.|.+.++.++..++|+.||+|+.|+.+.| |++++|||+| |.|+|.....+.+.-+.
T Consensus 501 v~F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwm-------------------GVPVVTl~G~~~asRvgaSl 560 (631)
T 3q3e_A 501 ATAHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTL-------------------GLVGVCKTGAEVHEHIDEGL 560 (631)
T ss_dssp EEEECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHT-------------------TCCEEEECCSSHHHHHHHHH
T ss_pred EEEcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHc-------------------CCCEEeccCCcHHHHhHHHH
Confidence 467789999999999999999999998876 9999999999 33455432222111111
Q ss_pred ----C--ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccC-CHhHHHHHHHHHHHHHHH
Q 002984 490 ----G--AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTH-DVAYWARSFAQDLERACR 549 (861)
Q Consensus 490 ----~--ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~-~~~~W~~~fl~~l~~~~~ 549 (861)
| .++| -.|.++.+++..++.+.+ +.++...+++++.+.+. -+..|.+.|-+.++++.+
T Consensus 561 L~~~GLpE~LI-A~d~eeYv~~Av~La~D~-~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~ 625 (631)
T 3q3e_A 561 FKRLGLPEWLI-ANTVDEYVERAVRLAENH-QERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLN 625 (631)
T ss_dssp HHHTTCCGGGE-ESSHHHHHHHHHHHHHCH-HHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHH
T ss_pred HHhcCCCccee-cCCHHHHHHHHHHHhCCH-HHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHH
Confidence 1 1122 247888888877777744 44444444544443221 112455555555555544
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=97.70 E-value=3.6e-05 Score=91.46 Aligned_cols=151 Identities=10% Similarity=0.091 Sum_probs=104.2
Q ss_pred CCeEEEeecCcccccCHHH-HHHHHHHHHH--hCCCCC-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 002984 333 GKKLILGIDDMDIFKGISL-KLLAMEQLLQ--QHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN 408 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~-~l~Af~~ll~--~~P~~~-~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~ 408 (861)
+..+++.|.|+...||..+ .+..++++++ ++|+.. ..+++|..|....+. .....+-+.+.++++-||..=.-.+
T Consensus 515 d~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~dp~~~~ 593 (796)
T 2c4m_A 515 ESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIADLVNNDPEVSP 593 (796)
T ss_dssp TSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTTT
T ss_pred CCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHHHhccccccCC
Confidence 5689999999999999999 8999998875 566522 246777666544222 2334566778888888887322233
Q ss_pred cccEEEEcCCCCHHHHHHHHHhcccceeccc--ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcc
Q 002984 409 YEPVVLIDRPVPRFEKSAYYAVAECCIVNAV--RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSP 486 (861)
Q Consensus 409 ~~pvv~~~~~v~~~el~aly~~ADv~vvtS~--~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 486 (861)
.-.|+++. ..+..--..+|.+||+++.||. .|.-|+.-+-+|.- |+|-+|..-|+-.
T Consensus 594 ~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N--------------------GaL~iGtLDGanv 652 (796)
T 2c4m_A 594 LLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN--------------------GALTLGTMDGANV 652 (796)
T ss_dssp TEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT--------------------TCEEEEESSTHHH
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc--------------------CCeEEeccCCeEe
Confidence 33355555 4555556689999999999999 78888777777763 5566677777665
Q ss_pred cC------CCceEeCC--CCHHHHHHH
Q 002984 487 SL------SGAIRVNP--WDIDAVADA 505 (861)
Q Consensus 487 ~l------~~ai~vnP--~d~~~~A~a 505 (861)
++ ++++++-. .+++++-.+
T Consensus 653 Ei~e~vG~~NgF~FG~~~~ev~~l~~~ 679 (796)
T 2c4m_A 653 EIVDSVGEENAYIFGARVEELPALRES 679 (796)
T ss_dssp HHHHHHCGGGSEEESCCTTTHHHHHHT
T ss_pred ehhhhcCCCcEEEecCchhhHHHHHHh
Confidence 54 24778766 666665543
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00018 Score=80.19 Aligned_cols=99 Identities=14% Similarity=0.034 Sum_probs=60.1
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEe----ccCCCCcccC
Q 002984 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVV----SEFIGCSPSL 488 (861)
Q Consensus 413 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~----Se~~G~~~~l 488 (861)
+.+.+.++. ..++..||++|. .|-+.+..|||+|+. |+|+ .+..+.++.+
T Consensus 286 v~~~~~~~~---~~ll~~ad~~v~----~gG~~t~~Ea~~~G~-------------------P~v~~p~~~~q~~~a~~~ 339 (398)
T 4fzr_A 286 VLAAGQFPL---SAIMPACDVVVH----HGGHGTTLTCLSEGV-------------------PQVSVPVIAEVWDSARLL 339 (398)
T ss_dssp EEEESCCCH---HHHGGGCSEEEE----CCCHHHHHHHHHTTC-------------------CEEECCCSGGGHHHHHHH
T ss_pred EEEeCcCCH---HHHHhhCCEEEe----cCCHHHHHHHHHhCC-------------------CEEecCCchhHHHHHHHH
Confidence 456667764 556777999984 444567899999944 4666 3434545445
Q ss_pred ---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHH
Q 002984 489 ---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (861)
Q Consensus 489 ---~~ai~vnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (861)
..|+++++. |.++++++|.++|+.+. .++...+...++.........++
T Consensus 340 ~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 393 (398)
T 4fzr_A 340 HAAGAGVEVPWEQAGVESVLAACARIRDDSS-YVGNARRLAAEMATLPTPADIVR 393 (398)
T ss_dssp HHTTSEEECC-------CHHHHHHHHHHCTH-HHHHHHHHHHHHTTSCCHHHHHH
T ss_pred HHcCCEEecCcccCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHcCCCHHHHHH
Confidence 347888877 78999999999998553 33333344444555555554443
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00024 Score=84.79 Aligned_cols=150 Identities=10% Similarity=0.051 Sum_probs=101.7
Q ss_pred CCeEEEeecCcccccCHHHH-HHHHHHHH--HhCCCCCC-cEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 002984 333 GKKLILGIDDMDIFKGISLK-LLAMEQLL--QQHPGMRG-KVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN 408 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~-l~Af~~ll--~~~P~~~~-~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~ 408 (861)
+..+++.|.|+...||..+. +..+++++ ..+|+..= .+++|..|....+. ....++-+.+.++++.+|..=.-.+
T Consensus 549 d~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va~~in~Dp~v~~ 627 (824)
T 2gj4_A 549 NSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIGDVVNHDPVVGD 627 (824)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTTCTTTGG
T ss_pred CcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHHHHhccCcccCC
Confidence 56899999999999999998 88888886 35665321 35677666544222 2334566778888888876422222
Q ss_pred cccEEEEcCCCCHHHHHHHHHhcccceeccc--ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcc
Q 002984 409 YEPVVLIDRPVPRFEKSAYYAVAECCIVNAV--RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSP 486 (861)
Q Consensus 409 ~~pvv~~~~~v~~~el~aly~~ADv~vvtS~--~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 486 (861)
.-.|+++. ..+..--..+|.+||+++.||. .|.-|+.-+-||.- |+|-+|..-|+-.
T Consensus 628 ~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN--------------------GaLtigtlDGanv 686 (824)
T 2gj4_A 628 RLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN--------------------GALTIGTMDGANV 686 (824)
T ss_dssp GEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT--------------------TCEEEECSCTTHH
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc--------------------CceEEEEecCccc
Confidence 22355554 4555555689999999999999 88888877777763 5566776667653
Q ss_pred cC------CCceEeCCCCHHHHHHHH
Q 002984 487 SL------SGAIRVNPWDIDAVADAM 506 (861)
Q Consensus 487 ~l------~~ai~vnP~d~~~~A~ai 506 (861)
++ .+++++... .+++ .++
T Consensus 687 Ei~e~vG~~Ngf~FG~~-~~ev-~~l 710 (824)
T 2gj4_A 687 EMAEEAGEENFFIFGMR-VEDV-DRL 710 (824)
T ss_dssp HHHHHHCGGGSEECSCC-HHHH-HHH
T ss_pred hhhhccCCCCEEEeCCc-HHHH-HHH
Confidence 33 237888765 6666 444
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=97.43 E-value=2.5e-05 Score=82.24 Aligned_cols=55 Identities=25% Similarity=0.305 Sum_probs=45.0
Q ss_pred hccceEEEecCCccccCCCCCC-------------------------CCCCHHHHHHHHHhhcCCCCeEEEECCCChh--
Q 002984 588 KTERRAIFLDYDGTVVPETSII-------------------------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRS-- 640 (861)
Q Consensus 588 ~s~~klI~~DlDGTLl~~~~~~-------------------------~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~-- 640 (861)
..++++|+||+||||++ .. ..+.+.+.++|+.| ++.|+.++|+|||+..
T Consensus 56 ~~~~kavifDlDGTLld---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L-~~~Gi~i~iaTnr~~~~~ 131 (258)
T 2i33_A 56 TEKKPAIVLDLDETVLD---NSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYT-ESKGVDIYYISNRKTNQL 131 (258)
T ss_dssp CSSEEEEEECSBTTTEE---CHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHH-HHTTCEEEEEEEEEGGGH
T ss_pred CCCCCEEEEeCcccCcC---CHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHH-HHCCCEEEEEcCCchhHH
Confidence 34679999999999999 42 56788999999999 7899999999999944
Q ss_pred -hHHHHh
Q 002984 641 -SLSEWL 646 (861)
Q Consensus 641 -~l~~~~ 646 (861)
.+...+
T Consensus 132 ~~~~~~L 138 (258)
T 2i33_A 132 DATIKNL 138 (258)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 444444
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=7.4e-05 Score=82.95 Aligned_cols=154 Identities=14% Similarity=0.086 Sum_probs=96.9
Q ss_pred CCeEEEeecCcccccCH-HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 002984 333 GKKLILGIDDMDIFKGI-SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi-~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~p 411 (861)
.+.+++++|++...|+. ...+.++.+. +++|+++ ++.++.+ .+.+.++ ...+
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~----~v~~~~~-----~~~~~l~-----------------~~~~ 270 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE----AVIAVPP-----EHRALLT-----------------DLPD 270 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE----EEEECCG-----GGGGGCT-----------------TCCT
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE----EEEEECC-----cchhhcc-----------------cCCC
Confidence 35678889999887666 7888888888 8787655 5555532 2211111 1112
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec----cCCCCccc
Q 002984 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS----EFIGCSPS 487 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S----e~~G~~~~ 487 (861)
-+.+.+.+++.++. ..||++|.. |-..+..|+++|+. |+|+. +-.+.++.
T Consensus 271 ~v~~~~~~~~~~ll---~~ad~~v~~----~G~~t~~Ea~~~G~-------------------P~v~~p~~~~q~~~a~~ 324 (391)
T 3tsa_A 271 NARIAESVPLNLFL---RTCELVICA----GGSGTAFTATRLGI-------------------PQLVLPQYFDQFDYARN 324 (391)
T ss_dssp TEEECCSCCGGGTG---GGCSEEEEC----CCHHHHHHHHHTTC-------------------CEEECCCSTTHHHHHHH
T ss_pred CEEEeccCCHHHHH---hhCCEEEeC----CCHHHHHHHHHhCC-------------------CEEecCCcccHHHHHHH
Confidence 34566777776654 999999843 44457899999944 46663 32333333
Q ss_pred C---CCceEeCC----CCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHH
Q 002984 488 L---SGAIRVNP----WDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSF 540 (861)
Q Consensus 488 l---~~ai~vnP----~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~f 540 (861)
+ ..|+.++| .|.++++++|.++|+.+. .++...+...++.........++.+
T Consensus 325 ~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i 383 (391)
T 3tsa_A 325 LAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTG-FAAAAIKLSDEITAMPHPAALVRTL 383 (391)
T ss_dssp HHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTH-HHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHcCCEEecCcccccCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4 34788988 899999999999998653 3333333444444555555554433
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0008 Score=84.35 Aligned_cols=163 Identities=18% Similarity=0.243 Sum_probs=92.1
Q ss_pred CCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHHH
Q 002984 610 KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVM 689 (861)
Q Consensus 610 ~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~ 689 (861)
.++-+++.+++++| ++.|+.|+++||+....+..+.+. +|+..++|..+ .+..
T Consensus 598 Dplr~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~ia~~---lgi~~~~~~~i-------------------~~~~---- 650 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKC-RSAGIKVIMVTGDHPITAKAIAKG---VGIISEGNETI-------------------EDIA---- 650 (1028)
T ss_dssp CCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHH---HTSSCTTCCCH-------------------HHHH----
T ss_pred CCCChhHHHHHHHH-HHcCCEEEEECCCCHHHHHHHHHH---cCCCCCCchhH-------------------HHHH----
Confidence 45779999999998 899999999999999999998854 45544333211 0000
Q ss_pred HHHhhcCCCceEeec-cceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHH
Q 002984 690 RSYTEATDGSNIEIK-ESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVR 768 (861)
Q Consensus 690 ~~y~~~~~gs~ie~k-~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~ 768 (861)
+... .+-..+... .......-. ++.....+++ .+.+......+ +..+.|. .|...++.+.+.
T Consensus 651 ~~~~--~~~~~~~~~~~~~~vi~G~----~l~~~~~~~l----~~~~~~~~~~v-----~ar~~P~--~K~~iV~~lq~~ 713 (1028)
T 2zxe_A 651 ARLN--IPIGQVNPRDAKACVVHGS----DLKDLSTEVL----DDILHYHTEIV-----FARTSPQ--QKLIIVEGCQRQ 713 (1028)
T ss_dssp HHTT--CCGGGSCGGGCCEEEEEHH----HHTTCCHHHH----HHHHHHCSEEE-----EESCCHH--HHHHHHHHHHHT
T ss_pred hhcC--cchhhccccccceEEEEcH----HhhhCCHHHH----HHHHhhCCcEE-----EEEcCHH--HHHHHHHHHHhC
Confidence 0000 000000000 001111100 0000111122 22222211111 1223343 599988887653
Q ss_pred hhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC-CC----CcccceecC--CHhHHHHHHH
Q 002984 769 MFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG-RK----PSKAKYYLD--DATDVLKLLQ 837 (861)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~----~s~Aky~l~--d~~eV~~~L~ 837 (861)
| ..|+++||+.||.+||+.|+. +|+|| ++ +..|++++. +.+.+.++++
T Consensus 714 ----g---~~V~~iGDG~ND~paLk~Adv--------------GIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~ 768 (1028)
T 2zxe_A 714 ----G---AIVAVTGDGVNDSPALKKADI--------------GVAMGISGSDVSKQAADMILLDDNFASIVTGVE 768 (1028)
T ss_dssp ----T---CCEEEEECSGGGHHHHHHSSE--------------EEEESSSCCHHHHHHCSEEETTCCTHHHHHHHH
T ss_pred ----C---CEEEEEcCCcchHHHHHhCCc--------------eEEeCCccCHHHHHhcCEEecCCCHHHHHHHHH
Confidence 3 569999999999999999985 78888 45 357888874 4676766654
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=96.25 E-value=5.8e-05 Score=79.61 Aligned_cols=53 Identities=21% Similarity=0.343 Sum_probs=38.5
Q ss_pred EEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhc
Q 002984 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (861)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~ 647 (861)
++..+|+.+...-.....+-+.+.++|+.| ++.|+.++++||.+...+..++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L-~~~g~~~~i~T~~~~~~~~~~~~ 171 (263)
T 2yj3_A 119 IAVYINGEPIASFNISDVPRPNLKDYLEKL-KNEGLKIIILSGDKEDKVKELSK 171 (263)
Confidence 555566655542112345678899999999 78999999999998888777763
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00097 Score=83.42 Aligned_cols=142 Identities=15% Similarity=0.223 Sum_probs=90.2
Q ss_pred CCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHHH
Q 002984 610 KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVM 689 (861)
Q Consensus 610 ~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~ 689 (861)
.++.+++.++++.| ++.|+.++++||........+.+.+ |+...+.. . .
T Consensus 602 D~lr~~~~~~I~~l-~~~Gi~v~miTGD~~~ta~~ia~~l---gi~~~~~~--------i-----~-------------- 650 (995)
T 3ar4_A 602 DPPRKEVMGSIQLC-RDAGIRVIMITGDNKGTAIAICRRI---GIFGENEE--------V-----A-------------- 650 (995)
T ss_dssp CCBCTTHHHHHHHH-HHTTCEEEEEESSCHHHHHHHHHHH---TSSCTTCC--------C-----T--------------
T ss_pred CCCchhHHHHHHHH-HHcCCEEEEECCCCHHHHHHHHHHc---CcCCCCCc--------c-----c--------------
Confidence 45678899999998 7999999999999999999888543 44322110 0 0
Q ss_pred HHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHh
Q 002984 690 RSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRM 769 (861)
Q Consensus 690 ~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l 769 (861)
+..+...+ +...++ +++.+.+ .+. .-+.++.|. +|...++.+.++
T Consensus 651 --------~~~~~g~~------~~~l~~-------~~~~~~~----~~~-------~v~~r~~P~--~K~~~v~~l~~~- 695 (995)
T 3ar4_A 651 --------DRAYTGRE------FDDLPL-------AEQREAC----RRA-------CCFARVEPS--HKSKIVEYLQSY- 695 (995)
T ss_dssp --------TTEEEHHH------HHTSCH-------HHHHHHH----HHC-------CEEESCCSS--HHHHHHHHHHTT-
T ss_pred --------ceEEEchh------hhhCCH-------HHHHHHH----hhC-------cEEEEeCHH--HHHHHHHHHHHC-
Confidence 00000000 000001 1222222 111 123345565 699999988653
Q ss_pred hcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Ccccceec--CCHhHHHHHHH
Q 002984 770 FNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 770 ~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l--~d~~eV~~~L~ 837 (861)
| +.|+++||+.||.+|++.|+. ++++|++ +..|++++ ++...+.++++
T Consensus 696 ---g---~~v~~~GDG~ND~~alk~Adv--------------giamg~g~~~ak~aAd~vl~~~~~~~i~~~i~ 749 (995)
T 3ar4_A 696 ---D---EITAMTGDGVNDAPALKKAEI--------------GIAMGSGTAVAKTASEMVLADDNFSTIVAAVE 749 (995)
T ss_dssp ---T---CCEEEEECSGGGHHHHHHSTE--------------EEEETTSCHHHHHTCSEEETTCCHHHHHHHHH
T ss_pred ---C---CEEEEEcCCchhHHHHHHCCe--------------EEEeCCCCHHHHHhCCEEECCCCHHHHHHHHH
Confidence 3 689999999999999999985 7888864 35788888 45777776654
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00033 Score=78.98 Aligned_cols=49 Identities=20% Similarity=0.280 Sum_probs=39.0
Q ss_pred ccceEEEecCCccccCCCCC---------CCCCCHHHHHHHHHhhcCCCCeEEEECCCC
Q 002984 589 TERRAIFLDYDGTVVPETSI---------IKSPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~---------~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~ 638 (861)
.++|+++||+||||+...+. ...+.+.+.++|+.| ++.|+.++|+|+++
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQEL-AAEGYKLVIFTNQM 113 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHH-HHTTCEEEEEEECH
T ss_pred CCCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHH-HHCCCeEEEEeCCc
Confidence 35799999999999873210 012578999999999 78999999999875
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00047 Score=79.16 Aligned_cols=37 Identities=11% Similarity=0.051 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+....+.+++++ |++++++++|||+.+|+.+.+.+|.
T Consensus 162 ~p~~~~~~~~~l---g~~p~~~~~v~D~~~di~~a~~aG~ 198 (555)
T 3i28_A 162 EPQIYKFLLDTL---KASPSEVVFLDDIGANLKPARDLGM 198 (555)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHc---CCChhHEEEECCcHHHHHHHHHcCC
Confidence 567899999999 9999999999999999999999997
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0014 Score=73.58 Aligned_cols=102 Identities=11% Similarity=0.019 Sum_probs=65.9
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCC----CcccC
Q 002984 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CSPSL 488 (861)
Q Consensus 413 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l 488 (861)
+.+.+.+++. .+|+.||++|..+ |. .+.+|||+|+ -|+|+.-..| .++.+
T Consensus 285 v~~~~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~G-------------------~P~i~~p~~~~q~~~a~~~ 338 (430)
T 2iyf_A 285 VEVHDWVPQL---AILRQADLFVTHA---GA-GGSQEGLATA-------------------TPMIAVPQAVDQFGNADML 338 (430)
T ss_dssp EEEESSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHTT-------------------CCEEECCCSHHHHHHHHHH
T ss_pred eEEEecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHhC-------------------CCEEECCCccchHHHHHHH
Confidence 4566777765 6899999988754 44 5889999994 4577776544 23333
Q ss_pred ---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHH
Q 002984 489 ---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (861)
Q Consensus 489 ---~~ai~vnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl 541 (861)
..|+.+++. |.++++++|.++|+. ++.++...+........+.....++.+.
T Consensus 339 ~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 395 (430)
T 2iyf_A 339 QGLGVARKLATEEATADLLRETALALVDD-PEVARRLRRIQAEMAQEGGTRRAADLIE 395 (430)
T ss_dssp HHTTSEEECCCC-CCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHcCCEEEcCCCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 347888877 889999999999973 3333333333333444444445444443
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.00082 Score=65.32 Aligned_cols=122 Identities=14% Similarity=0.142 Sum_probs=79.9
Q ss_pred CCeEEEeecCcc---cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCc
Q 002984 333 GKKLILGIDDMD---IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409 (861)
Q Consensus 333 ~~~vil~Vdrld---~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~ 409 (861)
...+++++|++. +.|++...++|++++ + ++ ++.++.+.. .+ ..
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-~~----~~~~~g~~~---~~----------------------~~ 66 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P-QK----VLWRFDGNK---PD----------------------TL 66 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-SE----EEEECCSSC---CT----------------------TC
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-Ce----EEEEECCcC---cc----------------------cC
Confidence 467899999994 677888888877532 2 22 444442221 00 01
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCC----Cc
Q 002984 410 EPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CS 485 (861)
Q Consensus 410 ~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~ 485 (861)
.+-+.+.+.+++.++.++ ..||++|.. -| +.+..|+++|+. |+|+.-..+ .+
T Consensus 67 ~~~v~~~~~~~~~~~l~~-~~ad~~I~~---~G-~~t~~Ea~~~G~-------------------P~i~~p~~~~Q~~na 122 (170)
T 2o6l_A 67 GLNTRLYKWIPQNDLLGH-PKTRAFITH---GG-ANGIYEAIYHGI-------------------PMVGIPLFADQPDNI 122 (170)
T ss_dssp CTTEEEESSCCHHHHHTS-TTEEEEEEC---CC-HHHHHHHHHHTC-------------------CEEECCCSTTHHHHH
T ss_pred CCcEEEecCCCHHHHhcC-CCcCEEEEc---CC-ccHHHHHHHcCC-------------------CEEeccchhhHHHHH
Confidence 123456678888777654 999999963 34 478999999944 466665532 23
Q ss_pred ccC---CCceEeCCC--CHHHHHHHHHHHhcC
Q 002984 486 PSL---SGAIRVNPW--DIDAVADAMTLAINM 512 (861)
Q Consensus 486 ~~l---~~ai~vnP~--d~~~~A~ai~~aL~m 512 (861)
..+ ..|+.+++. +.++++++|.++++.
T Consensus 123 ~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~ 154 (170)
T 2o6l_A 123 AHMKARGAAVRVDFNTMSSTDLLNALKRVIND 154 (170)
T ss_dssp HHHHTTTSEEECCTTTCCHHHHHHHHHHHHHC
T ss_pred HHHHHcCCeEEeccccCCHHHHHHHHHHHHcC
Confidence 333 347888876 889999999999973
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0017 Score=79.75 Aligned_cols=166 Identities=16% Similarity=0.182 Sum_probs=103.2
Q ss_pred HHHHHhccceEEEecCCc-----cccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEec
Q 002984 583 VSAYRKTERRAIFLDYDG-----TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAE 657 (861)
Q Consensus 583 ~~~y~~s~~klI~~DlDG-----TLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliae 657 (861)
.+.|.....|.+++=++. +++..-....++-+++.++++++ ++.|+.++++||........+.+++ |+...
T Consensus 502 ~~~~a~~G~RvL~vA~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l-~~aGI~v~MiTGD~~~TA~aIA~~l---GI~~~ 577 (920)
T 1mhs_A 502 VAEFATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEA-KTLGLSIKMLTGDAVGIARETSRQL---GLGTN 577 (920)
T ss_dssp HHHHHTSSCCCCEECCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHH-HHHTCEEEEEESSCHHHHHHHHHHH---TSSCS
T ss_pred HHHHHhCCCEEEEEEEeccccccEEEEEEEEeccccccHHHHHHHH-hhcCceEEEEcCCCHHHHHHHHHHc---CCCcc
Confidence 345555666777776543 55543224557889999999998 8999999999999999999988654 33210
Q ss_pred CcEEEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcC
Q 002984 658 HGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLAN 737 (861)
Q Consensus 658 nG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~ 737 (861)
+. ..+.. ...|. + .-.+. ++ .+.+.+
T Consensus 578 ----~~-~~~~~-------------------------~~~g~-----~-------~~~~~--------el----~~~~~~ 603 (920)
T 1mhs_A 578 ----IY-NAERL-------------------------GLGGG-----G-------DMPGS--------EV----YDFVEA 603 (920)
T ss_dssp ----CC-CSSSS-------------------------SSCBC-----C-------CGGGG--------GG----GTTTTT
T ss_pred ----cc-Cccce-------------------------eecCc-----c-------cCCHH--------HH----HHHHhh
Confidence 00 00000 00010 0 00001 01 111111
Q ss_pred CCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC
Q 002984 738 EPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR 817 (861)
Q Consensus 738 ~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~ 817 (861)
. .-+.++.|. +|...++.+.++ | +.|+++||+.||.+||+.|+. ++++|+
T Consensus 604 ~-------~V~arv~P~--~K~~iV~~Lq~~----g---~~Vam~GDGvNDapaLk~Adv--------------GIAmg~ 653 (920)
T 1mhs_A 604 A-------DGFAEVFPQ--HKYNVVEILQQR----G---YLVAMTGDGVNDAPSLKKADT--------------GIAVEG 653 (920)
T ss_dssp T-------SCEESCCST--HHHHHHHHHHTT----T---CCCEECCCCGGGHHHHHHSSE--------------EEEETT
T ss_pred C-------eEEEEeCHH--HHHHHHHHHHhC----C---CeEEEEcCCcccHHHHHhCCc--------------Cccccc
Confidence 1 123455665 699999998653 3 579999999999999999985 788887
Q ss_pred C----Ccccceec--CCHhHHHHHH
Q 002984 818 K----PSKAKYYL--DDATDVLKLL 836 (861)
Q Consensus 818 ~----~s~Aky~l--~d~~eV~~~L 836 (861)
+ +..|++++ ++...+.+.+
T Consensus 654 gtd~ak~aADiVl~~~~~~~I~~ai 678 (920)
T 1mhs_A 654 SSDAARSAADIVFLAPGLGAIIDAL 678 (920)
T ss_dssp SCHHHHHSSSEEESSCCSHHHHHHH
T ss_pred ccHHHHHhcCeEEcCCCHHHHHHHH
Confidence 5 35788877 3455555544
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0047 Score=68.11 Aligned_cols=137 Identities=10% Similarity=0.003 Sum_probs=82.8
Q ss_pred CeEEEeecCcccc-------cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCC
Q 002984 334 KKLILGIDDMDIF-------KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGS 406 (861)
Q Consensus 334 ~~vil~Vdrld~~-------KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~ 406 (861)
..+++++|++... +.+...++|++++ +++ ++.++. +++.+++ .. +.
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~----~~~~~g-----~~~~~~l----~~----~~----- 263 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVE----LIVAAP-----DTVAEAL----RA----EV----- 263 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCE----EEEECC-----HHHHHHH----HH----HC-----
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcE----EEEEeC-----CCCHHhh----CC----CC-----
Confidence 5688999999875 5677777777542 333 444331 1222221 11 10
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCC---
Q 002984 407 PNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG--- 483 (861)
Q Consensus 407 ~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G--- 483 (861)
+.+.+ +.+++.+ +|..||+||..+ | ..+..|+|+|+. |+|+.-..+
T Consensus 264 ----~~v~~-~~~~~~~---~l~~~d~~v~~~---G-~~t~~Ea~~~G~-------------------P~v~~p~~~dq~ 312 (384)
T 2p6p_A 264 ----PQARV-GWTPLDV---VAPTCDLLVHHA---G-GVSTLTGLSAGV-------------------PQLLIPKGSVLE 312 (384)
T ss_dssp ----TTSEE-ECCCHHH---HGGGCSEEEECS---C-TTHHHHHHHTTC-------------------CEEECCCSHHHH
T ss_pred ----CceEE-cCCCHHH---HHhhCCEEEeCC---c-HHHHHHHHHhCC-------------------CEEEccCcccch
Confidence 11245 6777654 678999999753 4 457899999944 466665532
Q ss_pred -CcccC---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhcc
Q 002984 484 -CSPSL---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (861)
Q Consensus 484 -~~~~l---~~ai~vnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~ 530 (861)
.++.+ ..|+.+++. +.++++++|.++|+.+ +.+.++.+..+.+..
T Consensus 313 ~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 313 APARRVADYGAAIALLPGEDSTEAIADSCQELQAKD--TYARRAQDLSREISG 363 (384)
T ss_dssp HHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHh
Confidence 33333 347788765 7899999999999843 333444444444433
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0041 Score=66.37 Aligned_cols=49 Identities=24% Similarity=0.363 Sum_probs=37.9
Q ss_pred ceEEEecCCccccCCCCC---------CCCCCHHHHHHHHHhhcCCCCeEEEECCCChh
Q 002984 591 RRAIFLDYDGTVVPETSI---------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRS 640 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~---------~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~ 640 (861)
.+.+++|+|||+...... ...+-+.+.++|+.| ++.|+.++|+|||+..
T Consensus 159 ~~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L-~~~g~~~~v~T~k~~~ 216 (301)
T 1ltq_A 159 PKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMY-ALMGYQIVVVSGRESG 216 (301)
T ss_dssp CEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHH-HHTTCEEEEEECSCCC
T ss_pred cceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHH-HHCCCeEEEEeCCCcc
Confidence 467889999999872110 012468999999999 6899999999999854
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.00054 Score=69.64 Aligned_cols=30 Identities=13% Similarity=0.093 Sum_probs=25.3
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 761 VAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 761 al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
....+++++ |+ +++|||+.+|+.+.+.+|.
T Consensus 150 ~~~~~~~~~---g~----~l~VGDs~~Di~aA~~aG~ 179 (211)
T 2b82_A 150 TKSQWLQDK---NI----RIFYGDSDNDITAARDVGA 179 (211)
T ss_dssp CSHHHHHHT---TE----EEEEESSHHHHHHHHHTTC
T ss_pred HHHHHHHHC---CC----EEEEECCHHHHHHHHHCCC
Confidence 345667777 66 9999999999999999997
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0095 Score=65.64 Aligned_cols=147 Identities=10% Similarity=0.016 Sum_probs=79.9
Q ss_pred CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEE
Q 002984 334 KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVV 413 (861)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv 413 (861)
..+++..|++...+.-...++|++.+ +.-. ++.++.++.. .+++.+++... ..+. ++
T Consensus 181 ~~ilv~gGs~g~~~~~~~~~~al~~l----~~~~-~~~vi~~~G~-----~~~~~~~~~~~----~~~~--------~~- 237 (365)
T 3s2u_A 181 VNLLVLGGSLGAEPLNKLLPEALAQV----PLEI-RPAIRHQAGR-----QHAEITAERYR----TVAV--------EA- 237 (365)
T ss_dssp CEEEECCTTTTCSHHHHHHHHHHHTS----CTTT-CCEEEEECCT-----TTHHHHHHHHH----HTTC--------CC-
T ss_pred cEEEEECCcCCccccchhhHHHHHhc----cccc-ceEEEEecCc-----cccccccceec----cccc--------cc-
Confidence 45666667876666555555665544 3222 2334433321 12333333322 2111 11
Q ss_pred EEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCc--------
Q 002984 414 LIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS-------- 485 (861)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~-------- 485 (861)
.+.+.+ +++..+|+.||++|..| | +.+..|+++|+.| .|+.-+.+..
T Consensus 238 ~v~~f~--~dm~~~l~~aDlvI~ra---G-~~Tv~E~~a~G~P-------------------~Ilip~p~~~~~~Q~~NA 292 (365)
T 3s2u_A 238 DVAPFI--SDMAAAYAWADLVICRA---G-ALTVSELTAAGLP-------------------AFLVPLPHAIDDHQTRNA 292 (365)
T ss_dssp EEESCC--SCHHHHHHHCSEEEECC---C-HHHHHHHHHHTCC-------------------EEECC-----CCHHHHHH
T ss_pred ccccch--hhhhhhhccceEEEecC---C-cchHHHHHHhCCC-------------------eEEeccCCCCCcHHHHHH
Confidence 122333 47899999999988543 5 4677899999544 5554444332
Q ss_pred ccC---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhc
Q 002984 486 PSL---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVS 529 (861)
Q Consensus 486 ~~l---~~ai~vnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~ 529 (861)
+.+ ..|++++.. +.++++++|.++|+.++ .++.+.++.++...
T Consensus 293 ~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~-~~~~m~~~a~~~~~ 340 (365)
T 3s2u_A 293 EFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPE-TLRSMADQARSLAK 340 (365)
T ss_dssp HHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTH-HHHHHHHHHHHTCC
T ss_pred HHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHH-HHHHHHHHHHhcCC
Confidence 223 336777655 47899999999998653 33344444444433
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0031 Score=77.39 Aligned_cols=171 Identities=15% Similarity=0.182 Sum_probs=104.3
Q ss_pred HHHHHHHHHhccceEEEecCC-------------ccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHH
Q 002984 579 IDHIVSAYRKTERRAIFLDYD-------------GTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEW 645 (861)
Q Consensus 579 ~~~~~~~y~~s~~klI~~DlD-------------GTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~ 645 (861)
.....+.|.+...|.+++=++ .+++..-....++-+++.++++++ ++.|+.++++||........+
T Consensus 443 ~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l-~~aGI~v~MiTGD~~~tA~~i 521 (885)
T 3b8c_A 443 VLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKET 521 (885)
T ss_dssp HHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHH-HHTTCCCEEEESSCHHHHTHH
T ss_pred HHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHH-HHcCCcEEEEcCCChHHHHHH
Confidence 445566777777788877664 233321112346789999999998 899999999999999999988
Q ss_pred hccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHH
Q 002984 646 LAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAK 725 (861)
Q Consensus 646 ~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~ 725 (861)
.++ +|+... . .+.. .+ .|...+. .. .+. ...
T Consensus 522 A~~---lGi~~~-~----~~~~-~l--------------------------~g~~~~~-------~~--~~~-----~l~ 552 (885)
T 3b8c_A 522 GRR---LGMGTN-M----YPSS-AL--------------------------LGTHKDA-------NL--ASI-----PVE 552 (885)
T ss_dssp HHT---TTCTTC-C----STTS-SC--------------------------CBGGGGT-------TS--CCS-----CHH
T ss_pred HHH---hCCccc-c----CCcc-ee--------------------------ecccccc-------cc--chh-----HHH
Confidence 854 444210 0 0000 00 0000000 00 000 011
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCC
Q 002984 726 ELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLP 805 (861)
Q Consensus 726 el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~ 805 (861)
++ +.+. .-+.++.|. +|...++.+.++ | +.|.++||+.||.+||+.++.
T Consensus 553 ~~-------~~~~-------~v~arv~P~--~K~~iV~~lq~~----g---~~Vam~GDGvNDapaLk~Adv-------- 601 (885)
T 3b8c_A 553 EL-------IEKA-------DGFAGVFPE--HKYEIVKKLQER----K---HIVGMTGDGVNDAPALKKADI-------- 601 (885)
T ss_dssp HH-------HHTS-------CCEECCCHH--HHHHHHHHHHHT----T---CCCCBCCCSSTTHHHHHHSSS--------
T ss_pred HH-------HhhC-------cEEEEECHH--HHHHHHHHHHHC----C---CeEEEEcCCchhHHHHHhCCE--------
Confidence 11 1111 123356665 699999998763 4 579999999999999999997
Q ss_pred CCCceEEEEeCCC----CcccceecC--CHhHHHHHH
Q 002984 806 VPPEIFACTVGRK----PSKAKYYLD--DATDVLKLL 836 (861)
Q Consensus 806 ~~~~~~av~vG~~----~s~Aky~l~--d~~eV~~~L 836 (861)
++++|++ +..|++++. +...+.+.+
T Consensus 602 ------GIAmg~gtd~ak~aADivl~~~~~~~I~~ai 632 (885)
T 3b8c_A 602 ------GIAVADATDAARGASDIVLTEPGLSVIISAV 632 (885)
T ss_dssp ------CCCCSSSHHHHGGGCSSCCSSCSHHHHTHHH
T ss_pred ------eEEeCCccHHHHHhcceeeccCchhHHHHHH
Confidence 5667764 467888773 455554444
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=95.84 E-value=0.015 Score=60.52 Aligned_cols=69 Identities=14% Similarity=0.108 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCC-cchHHHHHHccc-cCCCCCCCCCCceEEEEeCCC-----CcccceecCCHh
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDD-RSDEDMFESILS-TVSGPSLPVPPEIFACTVGRK-----PSKAKYYLDDAT 830 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~-~~~~~~~~~~~~~~av~vG~~-----~s~Aky~l~d~~ 830 (861)
+...++.+++++ |++++++++|||+ .+|+.+.+.+|. . ++.|..+.. ...|++++++..
T Consensus 178 ~p~~~~~~~~~~---~~~~~~~~~vGDs~~~Di~~A~~aG~~~-----------~i~v~~~~~~~~~~~~~~~~~i~~~~ 243 (260)
T 2gfh_A 178 APSIFYHCCDLL---GVQPGDCVMVGDTLETDIQGGLNAGLKA-----------TVWINKSGRVPLTSSPMPHYMVSSVL 243 (260)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCSE-----------EEEECTTCCCCSSCCCCCSEEESSGG
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCCchhhHHHHHHCCCce-----------EEEEcCCCCCcCcccCCCCEEECCHH
Confidence 578999999999 9999999999996 999999999996 2 123332221 246889999999
Q ss_pred HHHHHHHHHH
Q 002984 831 DVLKLLQGLA 840 (861)
Q Consensus 831 eV~~~L~~L~ 840 (861)
++.++|+.+.
T Consensus 244 el~~~l~~~~ 253 (260)
T 2gfh_A 244 ELPALLQSID 253 (260)
T ss_dssp GHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999988765
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=95.45 E-value=0.006 Score=60.49 Aligned_cols=21 Identities=24% Similarity=0.200 Sum_probs=18.3
Q ss_pred HHHHhhcCCCCCCeEEEEeCCcch
Q 002984 765 VLVRMFNGGRPPDFVMCVGDDRSD 788 (861)
Q Consensus 765 ll~~l~~~gi~~d~vlaiGD~~ND 788 (861)
+++++ |++++++++|||+.+|
T Consensus 122 ~~~~~---~~~~~~~~~vgDs~~d 142 (193)
T 2i7d_A 122 FVERI---ILTRDKTVVLGDLLID 142 (193)
T ss_dssp HHTTE---EECSCGGGBCCSEEEE
T ss_pred HHHHc---CCCcccEEEECCchhh
Confidence 45666 8999999999999999
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=95.25 E-value=0.045 Score=60.20 Aligned_cols=101 Identities=14% Similarity=0.082 Sum_probs=62.4
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccC-----CCCccc
Q 002984 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF-----IGCSPS 487 (861)
Q Consensus 413 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~-----~G~~~~ 487 (861)
+.+.+.+++. .++..||++|..+ |. .+..|+++++.| +|+.-. .+.+..
T Consensus 283 v~~~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G~P-------------------~v~~p~~~~~q~~~a~~ 336 (402)
T 3ia7_A 283 VEAHQWIPFH---SVLAHARACLTHG---TT-GAVLEAFAAGVP-------------------LVLVPHFATEAAPSAER 336 (402)
T ss_dssp EEEESCCCHH---HHHTTEEEEEECC---CH-HHHHHHHHTTCC-------------------EEECGGGCGGGHHHHHH
T ss_pred EEEecCCCHH---HHHhhCCEEEECC---CH-HHHHHHHHhCCC-------------------EEEeCCCcccHHHHHHH
Confidence 4566677765 8889999988665 33 467899999443 553322 233333
Q ss_pred C---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHH
Q 002984 488 L---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFA 541 (861)
Q Consensus 488 l---~~ai~vnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl 541 (861)
+ ..|+.+++. +.+++++++.++|+.+ +.+.+..+..+.+ ......+-++.+.
T Consensus 337 ~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~ 394 (402)
T 3ia7_A 337 VIELGLGSVLRPDQLEPASIREAVERLAADS--AVRERVRRMQRDILSSGGPARAADEVE 394 (402)
T ss_dssp HHHTTSEEECCGGGCSHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHcCCEEEccCCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHhhCChHHHHHHHHH
Confidence 3 336778776 8899999999999843 3333333333333 3344444444433
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=95.03 E-value=0.063 Score=59.53 Aligned_cols=100 Identities=19% Similarity=0.114 Sum_probs=60.9
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec----cCCCCcccC
Q 002984 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS----EFIGCSPSL 488 (861)
Q Consensus 413 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S----e~~G~~~~l 488 (861)
+.+.+.+++. .++..||++|..+ |.| +..|+++++.| +|+- +-...+..+
T Consensus 299 v~~~~~~~~~---~ll~~ad~~v~~~---G~~-t~~Ea~~~G~P-------------------~v~~p~~~~q~~~a~~l 352 (415)
T 3rsc_A 299 VEAHRWVPHV---KVLEQATVCVTHG---GMG-TLMEALYWGRP-------------------LVVVPQSFDVQPMARRV 352 (415)
T ss_dssp EEEESCCCHH---HHHHHEEEEEESC---CHH-HHHHHHHTTCC-------------------EEECCCSGGGHHHHHHH
T ss_pred EEEEecCCHH---HHHhhCCEEEECC---cHH-HHHHHHHhCCC-------------------EEEeCCcchHHHHHHHH
Confidence 3455777765 7788899988665 443 67899999543 5552 222233333
Q ss_pred ---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHHH
Q 002984 489 ---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSF 540 (861)
Q Consensus 489 ---~~ai~vnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~f 540 (861)
..|+.+++. +.++++++|.++|+.+ +.+.+.++..+.+ ......+.++.+
T Consensus 353 ~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i 408 (415)
T 3rsc_A 353 DQLGLGAVLPGEKADGDTLLAAVGAVAADP--ALLARVEAMRGHVRRAGGAARAADAV 408 (415)
T ss_dssp HHHTCEEECCGGGCCHHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHcCCEEEcccCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 346777765 8899999999999843 3333333333333 334444444433
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=95.01 E-value=0.015 Score=59.43 Aligned_cols=65 Identities=12% Similarity=0.117 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Cc-ccceecCCHhH
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PS-KAKYYLDDATD 831 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s-~Aky~l~d~~e 831 (861)
.|..++ +++ +++++++++|||+.+|+.+.+.+|.. ++..|.. .. .|.+.+++..+
T Consensus 151 ~K~~~~----~~~---~~~~~~~~~vGDs~~Di~~a~~aG~~-------------~~~~~~~~~~~~~~~~~~~~~~~~e 210 (236)
T 2fea_A 151 CKPSVI----HEL---SEPNQYIIMIGDSVTDVEAAKLSDLC-------------FARDYLLNECREQNLNHLPYQDFYE 210 (236)
T ss_dssp CHHHHH----HHH---CCTTCEEEEEECCGGGHHHHHTCSEE-------------EECHHHHHHHHHTTCCEECCSSHHH
T ss_pred cHHHHH----HHH---hccCCeEEEEeCChHHHHHHHhCCee-------------eechHHHHHHHHCCCCeeecCCHHH
Confidence 466555 455 89999999999999999999999973 2323321 12 27788999999
Q ss_pred HHHHHHHHHh
Q 002984 832 VLKLLQGLAT 841 (861)
Q Consensus 832 V~~~L~~L~~ 841 (861)
+.++|..+..
T Consensus 211 l~~~l~~~~~ 220 (236)
T 2fea_A 211 IRKEIENVKE 220 (236)
T ss_dssp HHHHHHTSHH
T ss_pred HHHHHHHhHH
Confidence 9998887543
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=94.99 E-value=0.0036 Score=65.49 Aligned_cols=58 Identities=17% Similarity=0.269 Sum_probs=42.5
Q ss_pred ccceEEEecCCccccCCCC-------C----------------CCCCCHHHHHHHHHhhcCCCCeEEEECCCChh----h
Q 002984 589 TERRAIFLDYDGTVVPETS-------I----------------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRS----S 641 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~-------~----------------~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~----~ 641 (861)
.++.+|+||+||||++... . ...+-+.+.+.|+.| ++.|+.++|+|||+.. .
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L-~~~G~ki~ivTgR~~~~~r~~ 134 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYV-NSHNGKVFYVTNRKDSTEKSG 134 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHH-HHTTEEEEEEEEEETTTTHHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHH-HHCCCeEEEEeCCCccchHHH
Confidence 4567999999999998321 0 112345677889998 7899999999999764 5
Q ss_pred HHHHhc
Q 002984 642 LSEWLA 647 (861)
Q Consensus 642 l~~~~~ 647 (861)
...++.
T Consensus 135 T~~~L~ 140 (262)
T 3ocu_A 135 TIDDMK 140 (262)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 566664
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=94.82 E-value=0.032 Score=62.76 Aligned_cols=144 Identities=9% Similarity=-0.016 Sum_probs=81.9
Q ss_pred CeEEEeecCcccc-----cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 002984 334 KKLILGIDDMDIF-----KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN 408 (861)
Q Consensus 334 ~~vil~Vdrld~~-----KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~ 408 (861)
..|+++.|++... |.+...++|+..+ +++ +|.++... +.+++ . .
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~----~v~~~g~~-----~~~~l---------------~--~ 316 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAE----IIATFDAQ-----QLEGV---------------A--N 316 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SSE----EEECCCTT-----TTSSC---------------S--S
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCE----EEEEECCc-----chhhh---------------c--c
Confidence 4688999999764 8888888887542 232 44333211 11111 0 1
Q ss_pred cccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCC----C
Q 002984 409 YEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----C 484 (861)
Q Consensus 409 ~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~ 484 (861)
..+-+.+.+.+++.+ +|..||++|. +-|. .+..|+++|+. |+|+.-+.+ .
T Consensus 317 ~~~~v~~~~~~~~~~---ll~~ad~~V~---~~G~-~t~~Ea~~~G~-------------------P~i~~p~~~dQ~~n 370 (441)
T 2yjn_A 317 IPDNVRTVGFVPMHA---LLPTCAATVH---HGGP-GSWHTAAIHGV-------------------PQVILPDGWDTGVR 370 (441)
T ss_dssp CCSSEEECCSCCHHH---HGGGCSEEEE---CCCH-HHHHHHHHTTC-------------------CEEECCCSHHHHHH
T ss_pred CCCCEEEecCCCHHH---HHhhCCEEEE---CCCH-HHHHHHHHhCC-------------------CEEEeCCcccHHHH
Confidence 123456777888754 5799999996 3454 57899999944 466665533 2
Q ss_pred cccC---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHH
Q 002984 485 SPSL---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYW 536 (861)
Q Consensus 485 ~~~l---~~ai~vnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W 536 (861)
++.+ ..|+.+++. +.++++++|.++|+.+ +.+.++.+..+.+ .......-
T Consensus 371 a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~ 426 (441)
T 2yjn_A 371 AQRTQEFGAGIALPVPELTPDQLRESVKRVLDDP--AHRAGAARMRDDMLAEPSPAEV 426 (441)
T ss_dssp HHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCCHHHH
T ss_pred HHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHcCCCHHHH
Confidence 3333 347888775 8899999999999743 3333344433333 33443333
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=94.80 E-value=0.0096 Score=62.17 Aligned_cols=57 Identities=18% Similarity=0.321 Sum_probs=41.9
Q ss_pred cceEEEecCCccccCCCC-----------------------CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChh----hH
Q 002984 590 ERRAIFLDYDGTVVPETS-----------------------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRS----SL 642 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~-----------------------~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~----~l 642 (861)
+.++|+||+||||++... ....+-+.+.+.|+.| ++.|+.++|+|||+.. ..
T Consensus 57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L-~~~G~~i~ivTgR~~~~~r~~T 135 (260)
T 3pct_A 57 KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYV-NANGGTMFFVSNRRDDVEKAGT 135 (260)
T ss_dssp -CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHH-HHTTCEEEEEEEEETTTSHHHH
T ss_pred CCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHH-HHCCCeEEEEeCCCccccHHHH
Confidence 346999999999998320 0123446788899998 7899999999999754 55
Q ss_pred HHHhc
Q 002984 643 SEWLA 647 (861)
Q Consensus 643 ~~~~~ 647 (861)
..++.
T Consensus 136 ~~~L~ 140 (260)
T 3pct_A 136 VDDMK 140 (260)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 56653
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=94.60 E-value=0.063 Score=59.32 Aligned_cols=149 Identities=11% Similarity=0.031 Sum_probs=82.1
Q ss_pred CCeEEEeecCcccc-cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 002984 333 GKKLILGIDDMDIF-KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (861)
Q Consensus 333 ~~~vil~Vdrld~~-KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~p 411 (861)
.+.+++++|++... |+......+++.+.+ . +++ ++.++.+. +.+.++ ...+
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~-~-~~~----~v~~~g~~-----~~~~l~-----------------~~~~ 283 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGE-V-DAD----FVLALGDL-----DISPLG-----------------TLPR 283 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHT-S-SSE----EEEECTTS-----CCGGGC-----------------SCCT
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHc-C-CCE----EEEEECCc-----Chhhhc-----------------cCCC
Confidence 45788999999655 354444444444432 2 333 55555332 101110 1112
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEe----ccCCCCc--
Q 002984 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVV----SEFIGCS-- 485 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~----Se~~G~~-- 485 (861)
-+.+.+.++.. .++..||++|.. |-..+..||++|+. |+|+ .+-.+.+
T Consensus 284 ~v~~~~~~~~~---~ll~~ad~~v~~----~G~~t~~Eal~~G~-------------------P~v~~p~~~dq~~~a~~ 337 (398)
T 3oti_A 284 NVRAVGWTPLH---TLLRTCTAVVHH----GGGGTVMTAIDAGI-------------------PQLLAPDPRDQFQHTAR 337 (398)
T ss_dssp TEEEESSCCHH---HHHTTCSEEEEC----CCHHHHHHHHHHTC-------------------CEEECCCTTCCSSCTTH
T ss_pred cEEEEccCCHH---HHHhhCCEEEEC----CCHHHHHHHHHhCC-------------------CEEEcCCCchhHHHHHH
Confidence 34566677655 456779999843 33357899999944 4666 5556666
Q ss_pred ccC---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHH
Q 002984 486 PSL---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSF 540 (861)
Q Consensus 486 ~~l---~~ai~vnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~f 540 (861)
+.+ ..|+.+++. +.++++ ++|+ +++.++...+...+..........++.+
T Consensus 338 ~~~~~~g~g~~~~~~~~~~~~l~----~ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l 392 (398)
T 3oti_A 338 EAVSRRGIGLVSTSDKVDADLLR----RLIG-DESLRTAAREVREEMVALPTPAETVRRI 392 (398)
T ss_dssp HHHHHHTSEEECCGGGCCHHHHH----HHHH-CHHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHCCCEEeeCCCCCCHHHHH----HHHc-CHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 666 347888776 455555 6666 3343443344444444556555554433
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=93.38 E-value=0.035 Score=61.54 Aligned_cols=38 Identities=13% Similarity=0.201 Sum_probs=34.3
Q ss_pred CCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002984 611 SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 611 ~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
++.+.+++.++.| ++.|+.|+|+||-....++.+...+
T Consensus 221 r~~p~~~eLi~~L-~~~G~~v~IVSgg~~~~v~~ia~~l 258 (385)
T 4gxt_A 221 RTLDEMVDLYRSL-EENGIDCYIVSASFIDIVRAFATDT 258 (385)
T ss_dssp EECHHHHHHHHHH-HHTTCEEEEEEEEEHHHHHHHHHCT
T ss_pred eeCHHHHHHHHHH-HHCCCeEEEEcCCcHHHHHHHHHHh
Confidence 4689999999999 8999999999999999999998654
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=91.56 E-value=0.36 Score=53.57 Aligned_cols=137 Identities=11% Similarity=0.040 Sum_probs=80.2
Q ss_pred CCeEEEeecCc-ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 002984 333 GKKLILGIDDM-DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (861)
Q Consensus 333 ~~~vil~Vdrl-d~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~p 411 (861)
...++++.|++ +..|.+...++|++.+ + .+ +++++|... .+ . ....+
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~~---~v~~~g~~~----~~---~-----------------~~~~~ 285 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-RR---VILSRGWAD----LV---L-----------------PDDGA 285 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-CC---EEECTTCTT----CC---C-----------------SSCGG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-Ce---EEEEeCCCc----cc---c-----------------cCCCC
Confidence 35788999999 6888888888888654 2 22 223223111 00 0 01112
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCC----Cccc
Q 002984 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CSPS 487 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~ 487 (861)
-+.+.+.+++.++ +..||+||.. -|. .+..|+++++. |+|+--+.+ .+..
T Consensus 286 ~v~~~~~~~~~~~---l~~~d~~v~~---~G~-~t~~Ea~~~G~-------------------P~i~~p~~~dQ~~na~~ 339 (415)
T 1iir_A 286 DCFAIGEVNHQVL---FGRVAAVIHH---GGA-GTTHVAARAGA-------------------PQILLPQMADQPYYAGR 339 (415)
T ss_dssp GEEECSSCCHHHH---GGGSSEEEEC---CCH-HHHHHHHHHTC-------------------CEEECCCSTTHHHHHHH
T ss_pred CEEEeCcCChHHH---HhhCCEEEeC---CCh-hHHHHHHHcCC-------------------CEEECCCCCccHHHHHH
Confidence 3456778887654 6999999964 455 57899999944 455554433 2222
Q ss_pred C---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhcc
Q 002984 488 L---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (861)
Q Consensus 488 l---~~ai~vnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~ 530 (861)
+ ..|+.+++. +.++++++|.++ +. + +.+.+.++..+.+..
T Consensus 340 l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~-~-~~~~~~~~~~~~~~~ 384 (415)
T 1iir_A 340 VAELGVGVAHDGPIPTFDSLSAALATA-LT-P-ETHARATAVAGTIRT 384 (415)
T ss_dssp HHHHTSEEECSSSSCCHHHHHHHHHHH-TS-H-HHHHHHHHHHHHSCS
T ss_pred HHHCCCcccCCcCCCCHHHHHHHHHHH-cC-H-HHHHHHHHHHHHHhh
Confidence 3 346777653 789999999999 63 3 333344444333333
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=91.54 E-value=0.14 Score=56.69 Aligned_cols=54 Identities=24% Similarity=0.273 Sum_probs=43.2
Q ss_pred CCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---------CcccceecCCHhHHHHHHHH
Q 002984 774 RPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK---------PSKAKYYLDDATDVLKLLQG 838 (861)
Q Consensus 774 i~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---------~s~Aky~l~d~~eV~~~L~~ 838 (861)
+++++|++|||+.+|+.+.+.+|.. +++|..|.. ...|++++++..++..+|+.
T Consensus 313 v~p~e~l~VGDs~~Di~aAk~AG~~-----------~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~eL~~~l~~ 375 (384)
T 1qyi_A 313 VNKDDVFIVGDSLADLLSAQKIGAT-----------FIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDN 375 (384)
T ss_dssp SCTTTEEEEESSHHHHHHHHHHTCE-----------EEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSC
T ss_pred CCCcCeEEEcCCHHHHHHHHHcCCE-----------EEEECCCccccccHHHHhhcCCCEEECCHHHHHHHHHH
Confidence 7899999999999999999999973 355555542 13688999999998877743
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=91.22 E-value=1.3 Score=53.02 Aligned_cols=176 Identities=11% Similarity=0.090 Sum_probs=104.4
Q ss_pred CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 002984 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (861)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~p 411 (861)
+|..++.+..++. |=-+..+..+.++|++-|+-+ |++...+. .....+++. ++ ++|-. - .
T Consensus 521 ~~~v~f~~fN~~~--Ki~p~~~~~W~~IL~~vP~S~----L~Ll~~~~----~~~~~l~~~----~~----~~gi~-~-~ 580 (723)
T 4gyw_A 521 EDAIVYCNFNQLY--KIDPSTLQMWANILKRVPNSV----LWLLRFPA----VGEPNIQQY----AQ----NMGLP-Q-N 580 (723)
T ss_dssp TTSEEEECCSCGG--GCCHHHHHHHHHHHHHCSSEE----EEEEETTG----GGHHHHHHH----HH----HTTCC-G-G
T ss_pred CCCEEEEeCCccc--cCCHHHHHHHHHHHHhCCCCe----EEEEeCcH----HHHHHHHHH----HH----hcCCC-c-C
Confidence 3556666677664 445889999999999999865 77766432 111223322 22 22322 1 3
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCc-----c
Q 002984 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS-----P 486 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~-----~ 486 (861)
.+.|.+..+.++..+.|+.+|+++-|--+-| +.+..||+.+ |++|+|--+..- .
T Consensus 581 r~~f~~~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~--------------------GvPvvt~~g~~~~sR~~~ 639 (723)
T 4gyw_A 581 RIIFSPVAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWA--------------------GTPMVTMPGETLASRVAA 639 (723)
T ss_dssp GEEEEECCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHT--------------------TCCEEBCCCSSGGGTHHH
T ss_pred eEEECCCCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHc--------------------CCCEEEccCCCccHhHHH
Confidence 4456667899999999999999999998877 6788999998 334444221110 0
Q ss_pred cC-C--C--ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhcc---CCHhHHHHHHHHHHHHHHHhh
Q 002984 487 SL-S--G--AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST---HDVAYWARSFAQDLERACRDH 551 (861)
Q Consensus 487 ~l-~--~--ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~---~~~~~W~~~fl~~l~~~~~~~ 551 (861)
++ . | -+ | -+|.++-.+.-.++-+ ..+.+....+++++...+ +|...|++.|-..+.++++..
T Consensus 640 s~l~~~gl~e~-i-a~~~~~Y~~~a~~la~-d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r~ 709 (723)
T 4gyw_A 640 SQLTCLGCLEL-I-AKNRQEYEDIAVKLGT-DLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHY 709 (723)
T ss_dssp HHHHHHTCGGG-B-CSSHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCccc-c-cCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHHH
Confidence 01 0 0 11 2 2344544432222222 234444434444444322 688888888888887777654
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=90.64 E-value=0.86 Score=50.47 Aligned_cols=92 Identities=12% Similarity=0.061 Sum_probs=57.8
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCC----CcccC
Q 002984 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CSPSL 488 (861)
Q Consensus 413 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l 488 (861)
+.+.+.+++. .+|..||++|.. -|. .+..|+++++. |+|+.-+.+ .+..+
T Consensus 307 v~~~~~~~~~---~~l~~~d~~v~~---~G~-~t~~Ea~~~G~-------------------P~i~~p~~~dQ~~na~~l 360 (424)
T 2iya_A 307 VEVHQWVPQL---DILTKASAFITH---AGM-GSTMEALSNAV-------------------PMVAVPQIAEQTMNAERI 360 (424)
T ss_dssp EEEESSCCHH---HHHTTCSEEEEC---CCH-HHHHHHHHTTC-------------------CEEECCCSHHHHHHHHHH
T ss_pred eEEecCCCHH---HHHhhCCEEEEC---Cch-hHHHHHHHcCC-------------------CEEEecCccchHHHHHHH
Confidence 4556677765 578899998753 354 57899999944 455554432 12222
Q ss_pred ---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCC
Q 002984 489 ---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHD 532 (861)
Q Consensus 489 ---~~ai~vnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~ 532 (861)
..|+.+++. +.++++++|.++|+.+ +.+.+..+..+.+...+
T Consensus 361 ~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~ 407 (424)
T 2iya_A 361 VELGLGRHIPRDQVTAEKLREAVLAVASDP--GVAERLAAVRQEIREAG 407 (424)
T ss_dssp HHTTSEEECCGGGCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSC
T ss_pred HHCCCEEEcCcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcC
Confidence 336777654 8899999999999733 33444444444444433
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.48 E-value=0.15 Score=50.86 Aligned_cols=60 Identities=12% Similarity=0.069 Sum_probs=45.4
Q ss_pred hccceEEEecCCccccCCCCCC--------------------CCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhc
Q 002984 588 KTERRAIFLDYDGTVVPETSII--------------------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (861)
Q Consensus 588 ~s~~klI~~DlDGTLl~~~~~~--------------------~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~ 647 (861)
..+++.+++|+||||+...... -..-|.+.+.|+.+. +. ..++|+|..+...+..++.
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~-~~-~~i~I~Tss~~~~a~~vl~ 102 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMG-QL-FECVLFTASLAKYADPVAD 102 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHH-HH-SEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHH-cC-CeEEEEcCCCHHHHHHHHH
Confidence 3467899999999999832110 012477888999984 44 9999999999999998886
Q ss_pred cc
Q 002984 648 PC 649 (861)
Q Consensus 648 ~~ 649 (861)
.+
T Consensus 103 ~l 104 (195)
T 2hhl_A 103 LL 104 (195)
T ss_dssp HH
T ss_pred Hh
Confidence 54
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=89.93 E-value=0.11 Score=52.66 Aligned_cols=68 Identities=13% Similarity=0.069 Sum_probs=46.8
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcc---hHHHHHHccccCCCCCCCCCCceEEEEeCCC--C------c-ccce
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRS---DEDMFESILSTVSGPSLPVPPEIFACTVGRK--P------S-KAKY 824 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~N---D~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~------s-~Aky 824 (861)
.|...++.+++ |++++++++|||+.+ |+...+.+|. .++.|..|.. + . .|++
T Consensus 147 ~K~~~~~~~~~-----~~~~~~~~~vgDs~~d~~di~~A~~aG~-----------~~i~v~~g~~~~~~~~l~~~~~~~~ 210 (231)
T 2p11_A 147 HKELMLDQVME-----CYPARHYVMVDDKLRILAAMKKAWGARL-----------TTVFPRQGHYAFDPKEISSHPPADV 210 (231)
T ss_dssp SGGGCHHHHHH-----HSCCSEEEEECSCHHHHHHHHHHHGGGE-----------EEEEECCSSSSSCHHHHHHSCCCSE
T ss_pred ChHHHHHHHHh-----cCCCceEEEEcCccchhhhhHHHHHcCC-----------eEEEeCCCCCCCcchhccccCCCce
Confidence 46666666655 578999999999999 5555556665 2355666631 1 1 3889
Q ss_pred ecCCHhHHHHHHHHHH
Q 002984 825 YLDDATDVLKLLQGLA 840 (861)
Q Consensus 825 ~l~d~~eV~~~L~~L~ 840 (861)
++++..++.++|..+.
T Consensus 211 ~i~~~~el~~~l~~~~ 226 (231)
T 2p11_A 211 TVERIGDLVEMDAEWL 226 (231)
T ss_dssp EESSGGGGGGCGGGGC
T ss_pred eecCHHHHHHHHHHHH
Confidence 9999999887776543
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=89.26 E-value=0.22 Score=48.92 Aligned_cols=59 Identities=10% Similarity=0.073 Sum_probs=44.8
Q ss_pred ccceEEEecCCccccCCCCCC--------------------CCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002984 589 TERRAIFLDYDGTVVPETSII--------------------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~--------------------~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
.+++.+++|+|+||+...... -..-|.+.+.|+.+. +. ..++|+|..+...+..++..
T Consensus 13 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~-~~-~~i~I~T~~~~~~a~~vl~~ 90 (181)
T 2ght_A 13 SDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMG-EL-FECVLFTASLAKYADPVADL 90 (181)
T ss_dssp TTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHH-HH-SEEEEECSSCHHHHHHHHHH
T ss_pred CCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHH-hC-CCEEEEcCCCHHHHHHHHHH
Confidence 457899999999999832110 013577888999984 44 99999999999999988865
Q ss_pred c
Q 002984 649 C 649 (861)
Q Consensus 649 ~ 649 (861)
+
T Consensus 91 l 91 (181)
T 2ght_A 91 L 91 (181)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=89.26 E-value=0.26 Score=51.19 Aligned_cols=36 Identities=11% Similarity=0.083 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 759 GLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 759 g~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
....+.+++++ |+++++|++|||+.+|+...+.+|.
T Consensus 190 p~~~~~~~~~l---g~~p~~~l~VgDs~~di~aA~~aG~ 225 (261)
T 1yns_A 190 SESYRKIADSI---GCSTNNILFLTDVTREASAAEEADV 225 (261)
T ss_dssp HHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHh---CcCcccEEEEcCCHHHHHHHHHCCC
Confidence 57889999999 9999999999999999999999997
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=88.95 E-value=0.79 Score=50.75 Aligned_cols=137 Identities=12% Similarity=0.003 Sum_probs=80.1
Q ss_pred CCeEEEeecCcc---cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCc
Q 002984 333 GKKLILGIDDMD---IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409 (861)
Q Consensus 333 ~~~vil~Vdrld---~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~ 409 (861)
...++++.|++. ..|.+...++|++.+ +++ +++++|.... + . .. .
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~---~v~~~g~~~~----~---~------------~~-----~ 284 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRR---VILSRGWTEL----V---L------------PD-----D 284 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCC---EEEECTTTTC----C---C------------SC-----C
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC-----CCe---EEEEeCCccc----c---c------------cC-----C
Confidence 356889999984 566677777777653 233 2233332110 0 0 00 1
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCC----Cc
Q 002984 410 EPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CS 485 (861)
Q Consensus 410 ~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~ 485 (861)
.+-+.+.+.+++.+ ++..||++|. +-|.| +..|+++|+.| +|+--+.+ .+
T Consensus 285 ~~~v~~~~~~~~~~---ll~~~d~~v~---~~G~~-t~~Ea~~~G~P-------------------~i~~p~~~dQ~~na 338 (416)
T 1rrv_A 285 RDDCFAIDEVNFQA---LFRRVAAVIH---HGSAG-TEHVATRAGVP-------------------QLVIPRNTDQPYFA 338 (416)
T ss_dssp CTTEEEESSCCHHH---HGGGSSEEEE---CCCHH-HHHHHHHHTCC-------------------EEECCCSBTHHHHH
T ss_pred CCCEEEeccCChHH---HhccCCEEEe---cCChh-HHHHHHHcCCC-------------------EEEccCCCCcHHHH
Confidence 11235667788655 5699999996 45655 88999999544 55533322 22
Q ss_pred ccC---CCceEeCC--CCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhcc
Q 002984 486 PSL---SGAIRVNP--WDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (861)
Q Consensus 486 ~~l---~~ai~vnP--~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~ 530 (861)
..+ ..|+.+++ .+.++++++|.++ + ++ +.+.+.++..+.+..
T Consensus 339 ~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~-~~-~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 339 GRVAALGIGVAHDGPTPTFESLSAALTTV-L-AP-ETRARAEAVAGMVLT 385 (416)
T ss_dssp HHHHHHTSEEECSSSCCCHHHHHHHHHHH-T-SH-HHHHHHHHHTTTCCC
T ss_pred HHHHHCCCccCCCCCCCCHHHHHHHHHHh-h-CH-HHHHHHHHHHHHHhh
Confidence 233 34666654 5789999999998 6 33 344445555444443
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=87.78 E-value=3.3 Score=45.50 Aligned_cols=138 Identities=11% Similarity=0.032 Sum_probs=80.3
Q ss_pred CCCeEEEeecCcc-cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 002984 332 DGKKLILGIDDMD-IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (861)
Q Consensus 332 ~~~~vil~Vdrld-~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~ 410 (861)
..+.|+++.|++. ..+.+...++|++++ +++ +|.++.+.... . .+..
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~----vv~~~g~~~~~-----~------------------~~~~ 267 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR----VVLSSGWAGLG-----R------------------IDEG 267 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC----EEEECTTTTCC-----C------------------SSCC
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE----EEEEeCCcccc-----c------------------ccCC
Confidence 3467889999998 666667777777653 233 33333221000 0 0111
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCc----c
Q 002984 411 PVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS----P 486 (861)
Q Consensus 411 pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~ 486 (861)
+-+.+.+.+++.+ ++..||++|-.+ |. .+..|+++++.| +|+--+.|-- .
T Consensus 268 ~~v~~~~~~~~~~---ll~~~d~~v~~g---G~-~t~~Eal~~GvP-------------------~v~~p~~~dQ~~na~ 321 (404)
T 3h4t_A 268 DDCLVVGEVNHQV---LFGRVAAVVHHG---GA-GTTTAVTRAGAP-------------------QVVVPQKADQPYYAG 321 (404)
T ss_dssp TTEEEESSCCHHH---HGGGSSEEEECC---CH-HHHHHHHHHTCC-------------------EEECCCSTTHHHHHH
T ss_pred CCEEEecCCCHHH---HHhhCcEEEECC---cH-HHHHHHHHcCCC-------------------EEEcCCcccHHHHHH
Confidence 2345557788765 456899998544 44 466899999544 4554443321 1
Q ss_pred cC---CCceEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhcc
Q 002984 487 SL---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (861)
Q Consensus 487 ~l---~~ai~vnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~ 530 (861)
.+ ..|+.+++. +.+++++++.++|+ + +.+.++++..+.+..
T Consensus 322 ~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~--~-~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 322 RVADLGVGVAHDGPTPTVESLSAALATALT--P-GIRARAAAVAGTIRT 367 (404)
T ss_dssp HHHHHTSEEECSSSSCCHHHHHHHHHHHTS--H-HHHHHHHHHHTTCCC
T ss_pred HHHHCCCEeccCcCCCCHHHHHHHHHHHhC--H-HHHHHHHHHHHHHhh
Confidence 12 335666543 78999999999997 3 344445555555544
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=87.46 E-value=0.43 Score=49.46 Aligned_cols=37 Identities=14% Similarity=0.147 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.......+++++ |+++++|++|||+.+|+...+.+|.
T Consensus 189 ~p~~~~~a~~~l---g~~p~~~l~vgDs~~di~aA~~aG~ 225 (253)
T 2g80_A 189 ETQSYANILRDI---GAKASEVLFLSDNPLELDAAAGVGI 225 (253)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCC
Confidence 467888899999 9999999999999999999999987
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=87.30 E-value=0.14 Score=51.30 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcc-hHHHHHHccccCCCCCCCCCCceEEEEeCCC--CcccceecCCHhHHHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRS-DEDMFESILSTVSGPSLPVPPEIFACTVGRK--PSKAKYYLDDATDVLK 834 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~N-D~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~s~Aky~l~d~~eV~~ 834 (861)
+....+.+++++ |+++ ++|||+.+ |+.+.+.+|.. +|.+... .....+.+++..++.+
T Consensus 152 ~~~~~~~~~~~~---~~~~---~~vgD~~~~Di~~a~~aG~~-------------~i~v~~~~~~~~~~~~i~~l~el~~ 212 (220)
T 2zg6_A 152 NPKIFGFALAKV---GYPA---VHVGDIYELDYIGAKRSYVD-------------PILLDRYDFYPDVRDRVKNLREALQ 212 (220)
T ss_dssp -CCHHHHHHHHH---CSSE---EEEESSCCCCCCCSSSCSEE-------------EEEBCTTSCCTTCCSCBSSHHHHHH
T ss_pred CHHHHHHHHHHc---CCCe---EEEcCCchHhHHHHHHCCCe-------------EEEECCCCCCCCcceEECCHHHHHH
Confidence 345888999999 8887 99999998 99999999873 4444321 1122567889999998
Q ss_pred HHHHHH
Q 002984 835 LLQGLA 840 (861)
Q Consensus 835 ~L~~L~ 840 (861)
+|..+.
T Consensus 213 ~l~~~~ 218 (220)
T 2zg6_A 213 KIEEMN 218 (220)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 887753
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=87.08 E-value=0.12 Score=52.31 Aligned_cols=16 Identities=19% Similarity=0.368 Sum_probs=14.4
Q ss_pred ccceEEEecCCccccC
Q 002984 589 TERRAIFLDYDGTVVP 604 (861)
Q Consensus 589 s~~klI~~DlDGTLl~ 604 (861)
+++|+|+||+||||++
T Consensus 9 ~~~k~viFDlDGTL~d 24 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLD 24 (231)
T ss_dssp CCSEEEEECCBTTTBC
T ss_pred CCCeEEEEcCCCCCEe
Confidence 3578999999999999
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=85.92 E-value=0.23 Score=49.65 Aligned_cols=31 Identities=26% Similarity=0.308 Sum_probs=22.4
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHh
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTL 623 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L 623 (861)
++|+|+||+||||++ ..........++++++
T Consensus 2 ~~k~viFDlDGTL~d---~~~~~~~~~~~~~~~~ 32 (220)
T 2zg6_A 2 KYKAVLVDFGNTLVG---FKPVFYEKVYQVLKDN 32 (220)
T ss_dssp CCCEEEECSBTTTEE---EEETTHHHHHHHHHHT
T ss_pred CceEEEEcCCCceec---ccccHHHHHHHHHHHh
Confidence 468999999999999 5544445555666654
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=85.64 E-value=0.17 Score=52.51 Aligned_cols=32 Identities=28% Similarity=0.507 Sum_probs=21.3
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHHh
Q 002984 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTL 623 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L 623 (861)
.++|+|+||+||||++ +.........++++.+
T Consensus 16 ~~~k~viFDlDGTLvd---s~~~~~~a~~~~~~~~ 47 (260)
T 2gfh_A 16 SRVRAVFFDLDNTLID---TAGASRRGMLEVIKLL 47 (260)
T ss_dssp CCCCEEEECCBTTTBC---HHHHHHHHHHHHHHHH
T ss_pred ccceEEEEcCCCCCCC---CHHHHHHHHHHHHHHH
Confidence 3578999999999999 4333334444455544
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=84.35 E-value=0.35 Score=48.49 Aligned_cols=76 Identities=13% Similarity=0.086 Sum_probs=50.4
Q ss_pred CcccccCCHHHHHHHHHhccceEEEecCCccccCCCCCC-----CCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHH
Q 002984 571 SPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSII-----KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEW 645 (861)
Q Consensus 571 ~~~f~~l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~~~-----~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~ 645 (861)
.|.|.+|=.+..-..| .+++.+++|+|+||+...... -..-|.+.+.|+.+ . ++..++|.|.-....+..+
T Consensus 16 ~p~~~~lLp~~~~~~~--~~~~tLVLDLDeTLvh~~~~~~~~~~v~~RPgl~eFL~~l-~-~~yeivI~Tas~~~ya~~v 91 (204)
T 3qle_A 16 EPPFPDLLPPPPPPPY--QRPLTLVITLEDFLVHSEWSQKHGWRTAKRPGADYFLGYL-S-QYYEIVLFSSNYMMYSDKI 91 (204)
T ss_dssp ---CCCCSCCCC------CCSEEEEEECBTTTEEEEEETTTEEEEEECTTHHHHHHHH-T-TTEEEEEECSSCHHHHHHH
T ss_pred CCCcccCCCCCCcccc--CCCeEEEEeccccEEeeeccccCceeEEeCCCHHHHHHHH-H-hCCEEEEEcCCcHHHHHHH
Confidence 3445555444333444 346899999999999832111 12347888999998 3 7899999999999999988
Q ss_pred hcccc
Q 002984 646 LAPCE 650 (861)
Q Consensus 646 ~~~~~ 650 (861)
+..+.
T Consensus 92 l~~LD 96 (204)
T 3qle_A 92 AEKLD 96 (204)
T ss_dssp HHHTS
T ss_pred HHHhC
Confidence 86653
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=83.34 E-value=0.36 Score=52.89 Aligned_cols=91 Identities=9% Similarity=-0.063 Sum_probs=53.7
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCC----Cccc
Q 002984 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CSPS 487 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~ 487 (861)
-+.+.+.+|+.+ ++..||+||- +-|+| +..|+++|+.| +|+-=+.+ .+..
T Consensus 289 ~v~~~~~~p~~~---lL~~~~~~v~---h~G~~-s~~Eal~~GvP-------------------~v~~P~~~dQ~~na~~ 342 (400)
T 4amg_A 289 NVRVVEWIPLGA---LLETCDAIIH---HGGSG-TLLTALAAGVP-------------------QCVIPHGSYQDTNRDV 342 (400)
T ss_dssp TEEEECCCCHHH---HHTTCSEEEE---CCCHH-HHHHHHHHTCC-------------------EEECCC---CHHHHHH
T ss_pred CEEEEeecCHHH---Hhhhhhheec---cCCcc-HHHHHHHhCCC-------------------EEEecCcccHHHHHHH
Confidence 345667788765 4578999774 45666 66899999544 55432222 2222
Q ss_pred C---CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCC
Q 002984 488 L---SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHD 532 (861)
Q Consensus 488 l---~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~ 532 (861)
+ .-|+.+++ .+.++++|.++|+.+ +.+.+.+++.+.+...+
T Consensus 343 v~~~G~g~~l~~--~~~~~~al~~lL~d~--~~r~~a~~l~~~~~~~~ 386 (400)
T 4amg_A 343 LTGLGIGFDAEA--GSLGAEQCRRLLDDA--GLREAALRVRQEMSEMP 386 (400)
T ss_dssp HHHHTSEEECCT--TTCSHHHHHHHHHCH--HHHHHHHHHHHHHHTSC
T ss_pred HHHCCCEEEcCC--CCchHHHHHHHHcCH--HHHHHHHHHHHHHHcCC
Confidence 2 23566654 345789999999843 33444455555554443
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=82.70 E-value=0.44 Score=46.92 Aligned_cols=53 Identities=13% Similarity=-0.091 Sum_probs=32.8
Q ss_pred CCCCCeEEEEeCCcch----HHHHH-HccccCCCCCCCCCCceEEEEeCC--C-C-c-ccce-ecCCH-hHHHHHHHH
Q 002984 773 GRPPDFVMCVGDDRSD----EDMFE-SILSTVSGPSLPVPPEIFACTVGR--K-P-S-KAKY-YLDDA-TDVLKLLQG 838 (861)
Q Consensus 773 gi~~d~vlaiGD~~ND----~~Mf~-~ag~~~~~~~~~~~~~~~av~vG~--~-~-s-~Aky-~l~d~-~eV~~~L~~ 838 (861)
|++++++++|||+.+| +..-+ .+|. .+|.+.. . . . ...+ .+++. +++..+|+.
T Consensus 129 ~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~-------------~~i~~~~~~~~~~~~~~~~~~v~~~~~~l~~~l~~ 193 (197)
T 1q92_A 129 VLTRDKTVVSADLLIDDRPDITGAEPTPSW-------------EHVLFTACHNQHLQLQPPRRRLHSWADDWKAILDS 193 (197)
T ss_dssp EECSCSTTSCCSEEEESCSCCCCSCSSCSS-------------EEEEECCTTTTTCCCCTTCEEECCTTSCHHHHHHT
T ss_pred ccCCccEEEECcccccCCchhhhcccCCCc-------------eEEEecCcccccccccccchhhhhHHHHHHHHhcc
Confidence 8889999999999999 64444 4443 2444432 1 1 1 1223 57777 577777663
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=82.48 E-value=0.84 Score=49.20 Aligned_cols=36 Identities=11% Similarity=0.036 Sum_probs=30.4
Q ss_pred CHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002984 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 613 s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
.+++++.++.| ++.|+.|+||||-+...++.+...+
T Consensus 145 ~~~~~~l~~~l-~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 145 FSGQRELYNKL-MENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp CHHHHHHHHHH-HHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred CHHHHHHHHHH-HHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 45677888888 7899999999999999999998653
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=81.59 E-value=0.45 Score=46.01 Aligned_cols=50 Identities=8% Similarity=-0.085 Sum_probs=35.0
Q ss_pred CeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC-CCcccceecCCHhHHHHHHHHHH
Q 002984 777 DFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR-KPSKAKYYLDDATDVLKLLQGLA 840 (861)
Q Consensus 777 d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~~s~Aky~l~d~~eV~~~L~~L~ 840 (861)
+.+++|||+.+|+. .++| . ++++..+. ....+.+.+++..|+..+|+.+.
T Consensus 129 ~~~l~ieDs~~~i~--~aaG-~-----------~i~~~~~~~~~~~~~~~i~~~~el~~~l~~~~ 179 (180)
T 3bwv_A 129 LADYLIDDNPKQLE--IFEG-K-----------SIMFTASHNVYEHRFERVSGWRDVKNYFNSIE 179 (180)
T ss_dssp CCSEEEESCHHHHH--HCSS-E-----------EEEECCGGGTTCCSSEEECSHHHHHHHHHHHC
T ss_pred cccEEecCCcchHH--HhCC-C-----------eEEeCCCcccCCCCceecCCHHHHHHHHHHhh
Confidence 56899999999974 3444 2 34554332 23457788999999999987764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 861 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-119 | |
| d1u02a_ | 229 | c.108.1.15 (A:) Trehalose-6-phosphate phosphatase | 1e-32 | |
| d1s2oa1 | 244 | c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 { | 3e-12 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-11 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-09 | |
| d2amya1 | 243 | c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human ( | 1e-08 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 3e-08 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 4e-08 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 2e-07 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 3e-07 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 6e-07 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 7e-07 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 4e-06 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 9e-06 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 366 bits (940), Expect = e-119
Identities = 128/487 (26%), Positives = 223/487 (45%), Gaps = 36/487 (7%)
Query: 60 RKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQ 119
R ++V+N + + G + G ++ G + E
Sbjct: 2 RLVVVSNRIAPPDEHAASAGGLAVGIL----------GALKAAGGLWFGWSGETGN--ED 49
Query: 120 EEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQA 179
+ + + + L ++Y F LWP FHY L + +F R W
Sbjct: 50 QPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAWDG 104
Query: 180 YVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY 239
Y+ N + ADK++ ++ DD +W+HDYHL+ LRKR ++GFFLH PFP+ EI+
Sbjct: 105 YLRVNALLADKLLPLLQDDD-IIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIF 163
Query: 240 RTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 299
LP D +L L + DL+GF T + FL C S + + S + H +G+
Sbjct: 164 NALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFRT 220
Query: 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQL 359
++ P+G+ + P K+ +++ + + I ++ +D KG+ + LA E L
Sbjct: 221 EVYPIGIEPKEIAKQAAGPLPP-KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEAL 279
Query: 360 LQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419
L+++P GK+ QI +RG + Q+ + + A RIN YG + P+ +++
Sbjct: 280 LEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHF 339
Query: 420 PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS 479
R + ++ +V +RDGMNLV +Y+ P + +LV+S
Sbjct: 340 DRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAA--QDP------------ANPGVLVLS 385
Query: 480 EFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539
+F G + L+ A+ VNP+D D VA A+ A+ M +E+ RH + + +D+ +W
Sbjct: 386 QFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQEC 445
Query: 540 FAQDLER 546
F DL++
Sbjct: 446 FISDLKQ 452
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 229 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 123 bits (310), Expect = 1e-32
Identities = 55/255 (21%), Positives = 92/255 (36%), Gaps = 31/255 (12%)
Query: 594 IFLDYDGTVVPETSII--KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
IFLDYDGT+VP ++S++ L +IV+GR +S +L
Sbjct: 3 IFLDYDGTLVPIIMNPEESYADAGLLSLISDLK--ERFDTYIVTGRSPEEISRFLPLDI- 59
Query: 652 LGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWH 711
+ HG + N + L + RS+ G I K A+++H
Sbjct: 60 -NMICYHGACSKINGQIVYNNGSD-RFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYH 117
Query: 712 HQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFN 771
D +L +E + G+ I+E++ GV+KG
Sbjct: 118 LGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKG--------SAIR 165
Query: 772 GGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATD 831
R + GDD +DE FE + VG + AK+++ D +
Sbjct: 166 SVRGERPAIIAGDDATDEAAFE------------ANDDALTIKVGEGETHAKFHVADYIE 213
Query: 832 VLKLLQGLATASSSK 846
+ K+L+ + K
Sbjct: 214 MRKILKFIEMLGVQK 228
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Score = 65.4 bits (158), Expect = 3e-12
Identities = 31/208 (14%), Positives = 65/208 (31%), Gaps = 20/208 (9%)
Query: 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTL--CSDPNNTVFIVSGRGRSS---LSEW 645
+ + D D T V + + + L+ N + +GR S L +
Sbjct: 3 QLLLISDLDNTWVGD--------QQALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQ 54
Query: 646 LAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKE 705
+ E G I + + ++ + I++ + + S +E
Sbjct: 55 VGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNP 114
Query: 706 SALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKV 765
+ +H Q E+L + + V++ PQ +KG + +
Sbjct: 115 WKISYHLDPQACPTVIDQLTEMLKETGIPVQV----IFSSGKDVDLLPQRSNKGNATQYL 170
Query: 766 LVRMFNGGRPPDFVMCVGDDRSDEDMFE 793
+ P + GD +D +FE
Sbjct: 171 QQHLAM---EPSQTLVCGDSGNDIGLFE 195
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 62.3 bits (150), Expect = 2e-11
Identities = 31/202 (15%), Positives = 67/202 (33%), Gaps = 21/202 (10%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
R +D DG + +I + I +++ TV ++SG + A
Sbjct: 4 RLAAIDVDGNLTDRDRLIS---TKAIESIRSA-EKKGLTVSLLSGN---VIPVVYALKIF 56
Query: 652 LGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWH 711
LGI +G N ++ + + + ++ T +I
Sbjct: 57 LGI---NGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSI--------LT 105
Query: 712 HQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFN 771
++ + G E +D++ + V+ + + +G K K+
Sbjct: 106 NRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSL 165
Query: 772 GGRPPDFVMCVGDDRSDEDMFE 793
D ++ +GD +D MF+
Sbjct: 166 ---EYDEILVIGDSNNDMPMFQ 184
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 55.8 bits (133), Expect = 3e-09
Identities = 32/202 (15%), Positives = 64/202 (31%), Gaps = 19/202 (9%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
+AI +D DGT+ +I + + ++ + +V+G
Sbjct: 3 KAISIDIDGTITYPNRMIH---EKALEAIRRA-ESLGIPIMLVTGNTVQFAEAASILI-- 56
Query: 652 LGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWH 711
G + + + + L + E + + + + A + + + LV
Sbjct: 57 -GTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIM 115
Query: 712 HQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFN 771
+ + + EL N V + VK ++KG +
Sbjct: 116 RETINVETVREIINEL---------NLNLVAVDSGFAIHVKKPWINKG---SGIEKASEF 163
Query: 772 GGRPPDFVMCVGDDRSDEDMFE 793
G P V VGD +D D F+
Sbjct: 164 LGIKPKEVAHVGDGENDLDAFK 185
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.3 bits (129), Expect = 1e-08
Identities = 31/228 (13%), Positives = 52/228 (22%), Gaps = 36/228 (15%)
Query: 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP-- 648
D DGT+ I E+ L+ L + +V G + E L
Sbjct: 3 PALCLFDVDGTLTAPRQKI---TKEMDDFLQKLRQ--KIKIGVVGGSDFEKVQEQLGNDV 57
Query: 649 CEMLGIAAEHGYFIRWNKTSEWETNHLGADL-------EWKKIVEPVMRSYTEATDGSNI 701
E + + ++ + L + + + G+ I
Sbjct: 58 VEKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFI 117
Query: 702 EIKESALVWHHQDADPDFGSCQAKELLDH------------LESVLANEPAVVKRGQHIV 749
E + L LD + GQ
Sbjct: 118 EFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISF 177
Query: 750 EVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRS----DEDMFE 793
+V P G K V + GD D ++F
Sbjct: 178 DVFPDGWDKRYCLRHVE------NDGYKTIYFFGDKTMPGGNDHEIFT 219
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 53.4 bits (127), Expect = 3e-08
Identities = 41/237 (17%), Positives = 79/237 (33%), Gaps = 46/237 (19%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
+ I +D DGT++ I P V + + + V + +GR + + +L +
Sbjct: 5 KLIAIDMDGTLLLPDHTIS---PAVKNAIAAARAR-GVNVVLTTGRPYAGVHNYL---KE 57
Query: 652 LGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMR--------------------S 691
L + Y I +N + G+ + + R
Sbjct: 58 LHMEQPGDYCITYNGALVQKAAD-GSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTL 116
Query: 692 YTEATDGSNIEIKESAL------VWHHQDADPDF---------GSCQAKELLDHLESVLA 736
YT D S + ES + + DP+ + + + +
Sbjct: 117 YTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVK 176
Query: 737 NEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFE 793
+ V+K + +E+ + V+KG V G P+ +M +GD +D M E
Sbjct: 177 EKYTVLKSAPYFLEILDKRVNKG---TGVKSLADVLGIKPEEIMAIGDQENDIAMIE 230
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 53.0 bits (126), Expect = 4e-08
Identities = 37/227 (16%), Positives = 71/227 (31%), Gaps = 31/227 (13%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP--- 648
+ I D DGT + + P ++ + L + SG L +
Sbjct: 3 KVIVTDMDGTFLNDAKTYNQ--PRFMAQYQEL-KKRGIKFVVASGNQYYQLISFFPELKD 59
Query: 649 -----CEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEA-TDGSNIE 702
E + EHG + + + E+ + +L K + V A + E
Sbjct: 60 EISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPE 119
Query: 703 IKESALVWHHQDADP----------------DFGSCQAKELLDHLESVLANEPAVVKRGQ 746
+ + H+ P + Q ++D L L V G
Sbjct: 120 AFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGF 179
Query: 747 HIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFE 793
+++ G+ K A + + P V+ +GD +D +M +
Sbjct: 180 GFIDLIIPGLHK---ANGISRLLKRWDLSPQNVVAIGDSGNDAEMLK 223
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 51.1 bits (121), Expect = 2e-07
Identities = 39/229 (17%), Positives = 69/229 (30%), Gaps = 35/229 (15%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
R D DGT++ + I + ++ L V SGR S
Sbjct: 3 RVFVFDLDGTLLNDNLEI---SEKDRRNIEKLSR--KCYVVFASGRMLVSTLNVEKKYFK 57
Query: 652 --LGIAAEHGYFI--------RWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNI 701
A +G + K + ++ + ++ N
Sbjct: 58 RTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNE 117
Query: 702 EIKESA--------LVWHHQDADPDFGSC---------QAKELLDHLESVLANEPAVVKR 744
EIK A + + + G+ + EL + L + V K
Sbjct: 118 EIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKS 177
Query: 745 GQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFE 793
+E+ P+ V KG + RM + ++ GD+ +D MFE
Sbjct: 178 FPTYLEIVPKNVDKGKALRFLRERMNW---KKEEIVVFGDNENDLFMFE 223
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 50.1 bits (118), Expect = 3e-07
Identities = 23/218 (10%), Positives = 50/218 (22%), Gaps = 22/218 (10%)
Query: 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLG 653
+F D DGT++ S L L + N V + S + + + + G
Sbjct: 7 VFSDLDGTLLDSHSYDW---QPAAPWLTRL-REANVPVILCSSKTSAEMLYLQKTLGLQG 62
Query: 654 IAAEH----GYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALV 709
+ + + + + +I + +
Sbjct: 63 LPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDAT 122
Query: 710 WHHQDADPD--------------FGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQG 755
+ E + + L +G V
Sbjct: 123 IAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDAS 182
Query: 756 VSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFE 793
K A ++ + +GD +D + E
Sbjct: 183 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLE 220
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 49.6 bits (117), Expect = 6e-07
Identities = 34/247 (13%), Positives = 72/247 (29%), Gaps = 48/247 (19%)
Query: 585 AYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSE 644
A + + + + +D+DGT+ + E I +K + V I +GR + +
Sbjct: 4 ALKGADIKLLLIDFDGTLFVDKD--IKVPSENIDAIKEA-IEKGYMVSICTGRSKVGILS 60
Query: 645 WLAPCEMLGIAAEHGYFIRWNK-------------------------------------- 666
+ + + N
Sbjct: 61 AFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELISYLVEKNLVNQTI 120
Query: 667 TSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKE 726
E+N++ D ++ ++ + N +K + DP ++K
Sbjct: 121 FHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPS----ESKT 176
Query: 727 LLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDR 786
++ +L+ N+ + EV G K + + D V+ VGD
Sbjct: 177 VIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINY---LLKHYNISNDQVLVVGDAE 233
Query: 787 SDEDMFE 793
+D M
Sbjct: 234 NDIAMLS 240
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 48.9 bits (115), Expect = 7e-07
Identities = 39/262 (14%), Positives = 68/262 (25%), Gaps = 39/262 (14%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
R IFLD D T++P +++ L D + S + R+ + E+
Sbjct: 3 RLIFLDIDKTLIPGYEP-----DPAKPIIEEL-KDMGFEIIFNSSKTRAEQEYYRKELEV 56
Query: 652 LG---------IAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIE 702
I GYF K E + + + ++
Sbjct: 57 ETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYG 116
Query: 703 IKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQG------- 755
+ P+ + + + + +V
Sbjct: 117 NSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTVHG 176
Query: 756 -VSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACT 814
KG A+ +L VGD +D MFE V
Sbjct: 177 NSDKGKAAKILLDFY--KRLGQIESYAVGDSYNDFPMFE-----VVD---------KVFI 220
Query: 815 VGRKPSKAKYYLDDATDVLKLL 836
VG K + DVL+++
Sbjct: 221 VGSLKHKKAQNVSSIIDVLEVI 242
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 47.2 bits (111), Expect = 4e-06
Identities = 36/252 (14%), Positives = 69/252 (27%), Gaps = 57/252 (22%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
+ I +D DGT++ + E + L+ D V + +GR + P +
Sbjct: 2 KLIAIDLDGTLLNSKHQV---SLENENALRQAQRD-GIEVVVSTGRAHFDVMSIFEPLGI 57
Query: 652 LGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRS------------YTEATDGS 699
+ + + I+ + YT
Sbjct: 58 KTWVISANGAVIHDPEGRLYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRE 117
Query: 700 NIEI---------KESALVWHHQDADPDFGSCQAKELLDHLESVLANEPA---------- 740
+++ E+ L Q A+ + + E A+EP
Sbjct: 118 LLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSF 177
Query: 741 -------------------VVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMC 781
+V +H E+ + SKG + + P +
Sbjct: 178 FKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKG---QALKRLAKQLNIPLEETAA 234
Query: 782 VGDDRSDEDMFE 793
VGD +D+ M E
Sbjct: 235 VGDSLNDKSMLE 246
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 45.7 bits (107), Expect = 9e-06
Identities = 34/226 (15%), Positives = 69/226 (30%), Gaps = 32/226 (14%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSE------- 644
+A+F D DGT+V + I L+ +FI +GR ++ ++
Sbjct: 2 KALFFDIDGTLV--SFETHRIPSSTIEALEAA-HAKGLKIFIATGRPKAIINNLSELQDR 58
Query: 645 ---WLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNI 701
I + + E + A E K + + + + N
Sbjct: 59 NLIDGYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNE 118
Query: 702 EIKESALVWHHQDADPD--------------FGSCQAKELLDHLESVLANEPAVVKRGQH 747
+K+ + H + P +E + L S+ E +
Sbjct: 119 MVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTCEI--GRWYPA 176
Query: 748 IVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFE 793
+V +G +K ++++ + M GD +D M
Sbjct: 177 FADVTAKGDTKQKGIDEIIRHFGI---KLEETMSFGDGGNDISMLR 219
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 861 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.96 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.93 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.92 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.92 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.92 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.91 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.9 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.9 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.9 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.88 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.88 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.88 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.86 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.85 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.82 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.8 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.77 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.73 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.58 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.39 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.06 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.98 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 98.89 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 98.82 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 98.8 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.76 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 98.56 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.51 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 98.44 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 98.39 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 98.37 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 98.35 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 98.33 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 98.3 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 98.22 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 98.21 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 98.13 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 98.11 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 98.07 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 97.89 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 97.87 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.87 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 97.69 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.68 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 97.66 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.61 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 97.25 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.25 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.24 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 97.14 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.13 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.95 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 96.19 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 94.32 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 93.73 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 92.83 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 92.02 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 89.85 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 89.12 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 88.86 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 83.84 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1e-99 Score=872.13 Aligned_cols=453 Identities=27% Similarity=0.520 Sum_probs=418.0
Q ss_pred CcEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCChhHHHHHHHhhcCCceEEEEeCC
Q 002984 59 ERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLP 138 (861)
Q Consensus 59 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~ 138 (861)
+||||||||+|+...+. .++|||+++|.+.+. +.+++||||+|.+.++++ .+......+|+|+||+|+
T Consensus 1 srlivvsnr~~~~~~~~---------~~~gGl~~al~~~~~-~~~g~Wvgw~g~~~~~~~--~~~~~~~~~~~~~~v~l~ 68 (456)
T d1uqta_ 1 SRLVVVSNRIAPPDEHA---------ASAGGLAVGILGALK-AAGGLWFGWSGETGNEDQ--PLKKVKKGNITWASFNLS 68 (456)
T ss_dssp CCEEEEEEECCCCC-------------CCCHHHHHHHHHHH-HHCEEEEEEEEEESCCSS--CCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCCCCCCC---------CCCccHHHHhHHHHh-hCCCEEEecCCCCCcccc--hhhhhhccCceeEEecCC
Confidence 58999999999976543 346899999977554 579999999987654322 222334678999999999
Q ss_pred hHHHHHHHhhccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHh
Q 002984 139 HDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRK 218 (861)
Q Consensus 139 ~~~~~~~y~gf~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~ 218 (861)
++++++||+||||++|||+|||+++. .+|++++|++|++||++||++|.+.++|+ |+||||||||++||.+||+
T Consensus 69 ~~~~~~~Y~gf~n~~LWpl~H~~~~~-----~~~~~~~~~~Y~~vN~~fA~~l~~~~~~~-d~iwvhDyhl~llp~~lR~ 142 (456)
T d1uqta_ 69 EQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQDD-DIIWIHDYHLLPFAHELRK 142 (456)
T ss_dssp HHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCTT-CEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccccCcccc-----ccccHHHHHHHHHHHHHHHHHHHHhccCC-CeEEEeccchhhhHHHHHH
Confidence 99999999999999999999999876 48999999999999999999999999974 9999999999999999999
Q ss_pred hcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEE
Q 002984 219 RFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVY 298 (861)
Q Consensus 219 ~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~ 298 (861)
+.|+++||||||+|||++++|+++|+|++|+++||++|+|||||++|++||++||.+++++...... .+.+.|+.++
T Consensus 143 ~~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~---~i~~~gr~v~ 219 (456)
T d1uqta_ 143 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK---SHTAWGKAFR 219 (456)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTT---EEEETTEEEE
T ss_pred hCCCCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCC---eEEecCceee
Confidence 9999999999999999999999999999999999999999999999999999999999998765544 4788999999
Q ss_pred EEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 002984 299 IKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNP 378 (861)
Q Consensus 299 i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p 378 (861)
+.++|+|||+..|......+ ..+.+.++++.++|+++|++|||+|+.||+..+|+||++||++||+++++++|+|++.|
T Consensus 220 v~~~p~GID~~~~~~~~~~~-~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~ 298 (456)
T d1uqta_ 220 TEVYPIGIEPKEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 298 (456)
T ss_dssp EEECCCCCCHHHHHHHHHSC-CCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCB
T ss_pred eeeecCcccchhhhhhcccH-HHHHHHHHHHhcCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCC
Confidence 99999999999998766544 44567788999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCC
Q 002984 379 ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458 (861)
Q Consensus 379 ~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~ 458 (861)
++++.++|.+++.++.+++++||++|+..+|.|++++.+.++++++.++|+.||||++||++||||||++|||||+.+
T Consensus 299 ~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p-- 376 (456)
T d1uqta_ 299 SRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 376 (456)
T ss_dssp CSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT--
T ss_pred cccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCCCceEEeccCCCCcccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHH
Q 002984 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (861)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (861)
.++|+||+|+++|+++++.+|++|||||++++|+||.+||+||++||+.|+++++++|.+||+.+|++
T Consensus 377 ------------~~~g~lIlS~~~G~~~~l~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~ 444 (456)
T d1uqta_ 377 ------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQE 444 (456)
T ss_dssp ------------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred ------------CCCCcEEEeCCCCCHHHhCCeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 25799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 002984 539 SFAQDLERA 547 (861)
Q Consensus 539 ~fl~~l~~~ 547 (861)
+||.+|+++
T Consensus 445 ~fl~~l~~~ 453 (456)
T d1uqta_ 445 CFISDLKQI 453 (456)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhh
Confidence 999999874
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.96 E-value=6.1e-29 Score=254.76 Aligned_cols=221 Identities=24% Similarity=0.313 Sum_probs=180.6
Q ss_pred EEEecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceE
Q 002984 593 AIFLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEW 670 (861)
Q Consensus 593 lI~~DlDGTLl~~~~--~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~ 670 (861)
|||||+||||++... ..+.++++++++|++| + +++.|+|+|||+...+...+. +..+++++||+.+..++...+
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l-~-~~~~v~i~TGR~~~~l~~~~~--~~~~~~~~ng~~~~~~~~~~~ 77 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDL-K-ERFDTYIVTGRSPEEISRFLP--LDINMICYHGACSKINGQIVY 77 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHH-H-HHSEEEEECSSCHHHHHHHSC--SSCEEEEGGGTEEEETTEEEE
T ss_pred EEEEEecCCCCCCCCChhhCCCCHHHHHHHHHH-h-hCCCEEEEcCCCHHHhhhhcC--ccccEEecCeEEEecCCceee
Confidence 799999999997432 3567999999999999 3 467899999999999988764 356789999999988876554
Q ss_pred EecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEE
Q 002984 671 ETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVE 750 (861)
Q Consensus 671 ~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vE 750 (861)
.. .......|.+.+.+.+..+....++.....+.....+++....+. ...+..+.++..+....+.+.++..++|
T Consensus 78 ~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~id 152 (229)
T d1u02a_ 78 NN-GSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIE 152 (229)
T ss_dssp CT-TGGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCST----THHHHHHHHHHHHHHHTCEEEECSSEEE
T ss_pred ec-chhhhHHHHHHHHHHhHHhhcccCCceecccccceeeeehhhhhh----hHHHHHHHHHHHhhcCCeEEEeeceEEE
Confidence 33 233445566666777777777789999999999999998876543 3345566666666666788899999999
Q ss_pred EecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCcccceecCCHh
Q 002984 751 VKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDAT 830 (861)
Q Consensus 751 I~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~Aky~l~d~~ 830 (861)
|.|+|+|||.|+++++++ ++++|||||.||++||+.++.+ |+|++|++++.|+|++++++
T Consensus 153 i~p~g~~Kg~al~~l~~~--------~~~i~~GDs~ND~~Mf~~~~~~------------~av~~g~~~~~A~~~~~~~~ 212 (229)
T d1u02a_ 153 LRVPGVNKGSAIRSVRGE--------RPAIIAGDDATDEAAFEANDDA------------LTIKVGEGETHAKFHVADYI 212 (229)
T ss_dssp EECTTCCHHHHHHHHHTT--------SCEEEEESSHHHHHHHHTTTTS------------EEEEESSSCCCCSEEESSHH
T ss_pred EecCCCCHHHHHHHHhcc--------ccceeecCCCChHHHHhccCCe------------EEEEeCCCCccCeEEcCCHH
Confidence 999999999999999752 5799999999999999999875 79999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 002984 831 DVLKLLQGLATA 842 (861)
Q Consensus 831 eV~~~L~~L~~~ 842 (861)
||.++|+.|...
T Consensus 213 ev~~~l~~l~~~ 224 (229)
T d1u02a_ 213 EMRKILKFIEML 224 (229)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998888887543
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=2.3e-25 Score=234.96 Aligned_cols=226 Identities=19% Similarity=0.256 Sum_probs=164.9
Q ss_pred ceEEEecCCccccCCCCCCCCCC-HHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCcc
Q 002984 591 RRAIFLDYDGTVVPETSIIKSPG-PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS 668 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s-~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~~ 668 (861)
+|+|+||+||||++ +.+.++ +.++++|++| ++.|+.|+++|||+...+.+++..+. ..+++++||+.+..++..
T Consensus 2 IKli~~DlDGTLl~---~~~~~~~~~~~~~l~~l-~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (269)
T d1rlma_ 2 VKVIVTDMDGTFLN---DAKTYNQPRFMAQYQEL-KKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQ 77 (269)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHH-HHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEE
T ss_pred EEEEEEeCCccCcC---CCCcCChHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcE
Confidence 68999999999998 666654 7899999999 67899999999999999999987764 457999999999998766
Q ss_pred eEEecCCccChHHHHHHHHHHHHHhhcC---------CCceEeeccce------------e--EeeeccCCccc------
Q 002984 669 EWETNHLGADLEWKKIVEPVMRSYTEAT---------DGSNIEIKESA------------L--VWHHQDADPDF------ 719 (861)
Q Consensus 669 ~~~~~~~~~~~~w~~~v~~i~~~y~~~~---------~gs~ie~k~~~------------l--~~~~~~~d~~~------ 719 (861)
.+...... +.....+..+.... ++.++...... + ...+...+..+
T Consensus 78 ~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (269)
T d1rlma_ 78 LFHGELTR------HESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLN 151 (269)
T ss_dssp EEECCCCH------HHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEE
T ss_pred EEEeccch------HHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEec
Confidence 55433221 11222222222211 12222111000 0 00111111111
Q ss_pred -hhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002984 720 -GSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 720 -~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
...+..++.+++...+......+.++..++||.|+++|||.|+++|++++ |++++++++||||.||++||+.+|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~l---gi~~~~vi~~GD~~ND~~Ml~~ag~- 227 (269)
T d1rlma_ 152 LPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRW---DLSPQNVVAIGDSGNDAEMLKMARY- 227 (269)
T ss_dssp CCGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCSE-
T ss_pred CCHHHHHHHHHHHHHHhhcceEEEEEcCceEEEecCchHHHHHHHHHhhhh---ccccccEEEEcCCcchHHHHHhCCe-
Confidence 12345667777776666666778889999999999999999999999999 9999999999999999999999986
Q ss_pred CCCCCCCCCCceEEEEeCCC----CcccceecCC--HhHHHHHHHHHHhhc
Q 002984 799 VSGPSLPVPPEIFACTVGRK----PSKAKYYLDD--ATDVLKLLQGLATAS 843 (861)
Q Consensus 799 ~~~~~~~~~~~~~av~vG~~----~s~Aky~l~d--~~eV~~~L~~L~~~~ 843 (861)
+|+|||+ +..|+|++.+ .++|++.|+++.+-.
T Consensus 228 -------------~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~~~ 265 (269)
T d1rlma_ 228 -------------SFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNT 265 (269)
T ss_dssp -------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHTC
T ss_pred -------------EEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHhcC
Confidence 7899987 4788899875 577999999988743
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.92 E-value=8.2e-25 Score=230.98 Aligned_cols=223 Identities=16% Similarity=0.124 Sum_probs=158.7
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc--cCCceEecCcEEEEeCCc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC--EMLGIAAEHGYFIRWNKT 667 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~--~~lgliaenG~~i~~~~~ 667 (861)
|+|+|+||+||||++ +++.++++++++|+++ ++ +..++++|||++..+...+..+ ...+++++||+.|..+++
T Consensus 1 m~Kli~~DlDGTL~~---~~~~i~~~~~~al~~l-~~-~~~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~ 75 (267)
T d1nf2a_ 1 MYRVFVFDLDGTLLN---DNLEISEKDRRNIEKL-SR-KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEE 75 (267)
T ss_dssp CBCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-TT-TSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTT
T ss_pred CeEEEEEeCCccccC---CcCccCHHHHHHHHHH-Hc-CCEEEEECCCChHHHHHHHHHhcccCCceeccCCeEEEeccc
Confidence 689999999999999 7889999999999999 44 5589999999999988887663 244689999999988665
Q ss_pred ce-EEecCCccChHHHHHHHHHHHHHhhcCCC-------ceEeeccc-ee---------EeeeccCCc------cc----
Q 002984 668 SE-WETNHLGADLEWKKIVEPVMRSYTEATDG-------SNIEIKES-AL---------VWHHQDADP------DF---- 719 (861)
Q Consensus 668 ~~-~~~~~~~~~~~w~~~v~~i~~~y~~~~~g-------s~ie~k~~-~l---------~~~~~~~d~------~~---- 719 (861)
.. +...++ .+.+..+++...+.... .++..+.. .+ ......... ..
T Consensus 76 ~~i~~~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 149 (267)
T d1nf2a_ 76 GVILNEKIP------PEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLL 149 (267)
T ss_dssp EEEEECCBC------HHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEE
T ss_pred ccccccCCC------HHHHHHHHHHHHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCceecCcHHHHhhhccceEEE
Confidence 44 333222 22233333333322111 11111100 00 000000000 00
Q ss_pred ---hhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcc
Q 002984 720 ---GSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESIL 796 (861)
Q Consensus 720 ---~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 796 (861)
...+.+++.+.+.+.+.+....+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.+|
T Consensus 150 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~---~i~~~~vva~GD~~ND~~ml~~~~ 226 (267)
T d1nf2a_ 150 LIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERM---NWKKEEIVVFGDNENDLFMFEEAG 226 (267)
T ss_dssp EECCHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHTTCS
T ss_pred EeccHHHHHHHHHHHHHhhCCcEEEEEeecceeeecCCCCchhHHHHHHHHhh---ccCcccEEEEcCCcchHHHHHhCC
Confidence 01234556666666666666677889999999999999999999999999 999999999999999999999998
Q ss_pred ccCCCCCCCCCCceEEEEeCCCC----cccceecC--CHhHHHHHHHHHH
Q 002984 797 STVSGPSLPVPPEIFACTVGRKP----SKAKYYLD--DATDVLKLLQGLA 840 (861)
Q Consensus 797 ~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~--d~~eV~~~L~~L~ 840 (861)
. +|+|||++ ..|+|++. +.++|+++|++|.
T Consensus 227 ~--------------sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~~ll 262 (267)
T d1nf2a_ 227 L--------------RVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIS 262 (267)
T ss_dssp E--------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBC
T ss_pred c--------------EEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHH
Confidence 5 89999974 77889886 4678999998865
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=7e-25 Score=231.35 Aligned_cols=227 Identities=16% Similarity=0.209 Sum_probs=155.3
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc----CCceEecCcEEEEeC
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE----MLGIAAEHGYFIRWN 665 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~----~lgliaenG~~i~~~ 665 (861)
.+|+|+||+||||++ .++.+++++.++|++| ++.|+.|+++|||++..+.++++.+. ..++++.||+.+...
T Consensus 3 ~iKli~~DlDGTL~~---~~~~i~~~~~~al~~L-~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~ 78 (271)
T d1rkqa_ 3 AIKLIAIDMDGTLLL---PDHTISPAVKNAIAAA-RARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKA 78 (271)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEET
T ss_pred CeeEEEEeCCccccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEecc
Confidence 489999999999999 7888999999999999 68899999999999999998887642 344889999998765
Q ss_pred Cc--ceEEecCCccChHHHHHHHHHHHHHhhc-----CCCceEeeccce-------------eEee-eccCCc--cch--
Q 002984 666 KT--SEWETNHLGADLEWKKIVEPVMRSYTEA-----TDGSNIEIKESA-------------LVWH-HQDADP--DFG-- 720 (861)
Q Consensus 666 ~~--~~~~~~~~~~~~~w~~~v~~i~~~y~~~-----~~gs~ie~k~~~-------------l~~~-~~~~d~--~~~-- 720 (861)
.. ..+..... ......+..+.+.+... ..+.+...+... ..+. ....++ .+.
T Consensus 79 ~~~~~i~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (271)
T d1rkqa_ 79 ADGSTVAQTALS---YDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKV 155 (271)
T ss_dssp TTCCEEEECCBC---HHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEE
T ss_pred CCCeEEEeeccc---HHHHHHHHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEE
Confidence 33 23332222 22222222222222110 011111111100 0000 000000 000
Q ss_pred -----hccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHc
Q 002984 721 -----SCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESI 795 (861)
Q Consensus 721 -----~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a 795 (861)
....++.++.+.+.+.+....+..+..++||.|+++|||.|++++++++ +++.+++++|||+.||++||+.+
T Consensus 156 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~---~i~~~~ii~~GD~~ND~~ml~~~ 232 (271)
T d1rkqa_ 156 MMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVL---GIKPEEIMAIGDQENDIAMIEYA 232 (271)
T ss_dssp EEECCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHS
T ss_pred EEecCHHHHHHHHHHHHHHhhcceEEEEecCceEEecCCCCCcccccceehhhc---ccchhcEEEEeCcHhHHHHHHhC
Confidence 0122334444444444444567788999999999999999999999999 99999999999999999999999
Q ss_pred cccCCCCCCCCCCceEEEEeCCCC----cccceecCC--HhHHHHHHHHHH
Q 002984 796 LSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDD--ATDVLKLLQGLA 840 (861)
Q Consensus 796 g~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d--~~eV~~~L~~L~ 840 (861)
++ +++|+|++ ..|+|++.+ .++|++.|+++.
T Consensus 233 ~~--------------~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~~~ 269 (271)
T d1rkqa_ 233 GV--------------GVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYV 269 (271)
T ss_dssp SE--------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHT
T ss_pred Cc--------------EEEeCCCCHHHHHhCCEEcCCCCcChHHHHHHHHh
Confidence 96 78999974 788888864 577999998864
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=3.7e-24 Score=227.27 Aligned_cols=222 Identities=18% Similarity=0.192 Sum_probs=152.1
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCcce
Q 002984 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE 669 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~~~ 669 (861)
+|+|+||+||||++ .++.++++++++|++| +++|+.|+++|||++..+.+++..+. ..+++++||+.+...++..
T Consensus 1 iKli~~DlDGTLl~---~~~~i~~~~~~~l~~l-~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~~~~~~ 76 (285)
T d1nrwa_ 1 MKLIAIDLDGTLLN---SKHQVSLENENALRQA-QRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRL 76 (285)
T ss_dssp CCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCE
T ss_pred CeEEEEECCccccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHhCCCcEEEecCceeEEecCCce
Confidence 58999999999999 7888999999999999 68899999999999999999998765 4468999999999865544
Q ss_pred E-EecCCccChHHHHHHHHHHHHHhhcCCCceEeeccc-----------------------------------------e
Q 002984 670 W-ETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKES-----------------------------------------A 707 (861)
Q Consensus 670 ~-~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~-----------------------------------------~ 707 (861)
+ ...++ .+.+.++++..........+..... .
T Consensus 77 i~~~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (285)
T d1nrwa_ 77 YHHETID------KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSG 150 (285)
T ss_dssp EEECCCC------HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCC
T ss_pred eeeccCC------HHHHHHHHHHHHHcCCceEEecCceEEeccccHHHHHHHHHhhhhcCcccchhhhhhhhhhhhcccc
Confidence 3 32222 1222333332222100000000000 0
Q ss_pred eE--eeecc---C-Ccc-ch-----hccHHHHHHHHHHHhcCCC-EEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCC
Q 002984 708 LV--WHHQD---A-DPD-FG-----SCQAKELLDHLESVLANEP-AVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGR 774 (861)
Q Consensus 708 l~--~~~~~---~-d~~-~~-----~~~a~el~~~L~~~l~~~~-~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi 774 (861)
.. ..+.. . ++. +. ......+............ ..+.++..++||.|+++|||.|++++++++ |+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ldi~~~~~~K~~ai~~l~~~~---gi 227 (285)
T d1nrwa_ 151 FAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQL---NI 227 (285)
T ss_dssp EEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHT---TC
T ss_pred ceeechHHHHhhcccchhheeeecccchHHHHHHHHHHhhcCCCeEEEEeCCcEEEEecccchhhhHHHHHHhhc---cc
Confidence 00 00000 0 000 00 0011222222222222223 345678899999999999999999999999 99
Q ss_pred CCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccceecCC--HhHHHHHHHHH
Q 002984 775 PPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDD--ATDVLKLLQGL 839 (861)
Q Consensus 775 ~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d--~~eV~~~L~~L 839 (861)
+++++++|||+.||++||+.++. +|+|+|++ ..|+|++.+ .++|.++|++|
T Consensus 228 ~~~~vi~~GD~~ND~~Ml~~a~~--------------svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~l 284 (285)
T d1nrwa_ 228 PLEETAAVGDSLNDKSMLEAAGK--------------GVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL 284 (285)
T ss_dssp CGGGEEEEESSGGGHHHHHHSSE--------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred CcccEEEEeCCHHHHHHHHhCCe--------------EEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHh
Confidence 99999999999999999999985 78999873 788898875 57899999876
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.91 E-value=2.9e-24 Score=225.84 Aligned_cols=223 Identities=14% Similarity=0.183 Sum_probs=149.7
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhc---cccCCceEecCcEEEEeCCc
Q 002984 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA---PCEMLGIAAEHGYFIRWNKT 667 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~---~~~~lgliaenG~~i~~~~~ 667 (861)
.|+||||+||||++. ..+.++++++++|+++ ++.|+.|+++|||++..+..+.. .....+++++||+.++.+++
T Consensus 1 ~k~if~DlDGTL~~~--~~~~i~~~~~~al~~l-~~~gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~~nGa~i~~~~~ 77 (260)
T d2rbka1 1 TKALFFDIDGTLVSF--ETHRIPSSTIEALEAA-HAKGLKIFIATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGEE 77 (260)
T ss_dssp CCEEEECSBTTTBCT--TTSSCCHHHHHHHHHH-HHTTCEEEEECSSCGGGCCSCHHHHHTTCCCEEEEGGGTEEEETTE
T ss_pred CeEEEEECCCCCcCC--CCCCCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHHhcCCCCceEecCCcccccCcc
Confidence 389999999999982 3567899999999999 79999999999999887764322 12245789999999999887
Q ss_pred ceEEecCCccChHHHHHHHHHHHHHhhcCCCceE-eeccceeE--------e--eecc--CCc----------cch---h
Q 002984 668 SEWETNHLGADLEWKKIVEPVMRSYTEATDGSNI-EIKESALV--------W--HHQD--ADP----------DFG---S 721 (861)
Q Consensus 668 ~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~i-e~k~~~l~--------~--~~~~--~d~----------~~~---~ 721 (861)
..+...++. +.+..+++...+......+ ........ . .+.. ..+ .+. .
T Consensus 78 ~i~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (260)
T d2rbka1 78 VIYKSAIPQ------EEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTP 151 (260)
T ss_dssp EEEECCCCH------HHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEE
T ss_pred cccccCCCH------HHHHHHHHHHHHcCCcEEEEecCceeeccchHHHHHHHHHhhccCcCcccCHhHhcCcceEEEee
Confidence 677665442 1222333222221111111 11000000 0 0000 000 000 0
Q ss_pred ccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCC
Q 002984 722 CQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSG 801 (861)
Q Consensus 722 ~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~ 801 (861)
....+....+.+.+.. .....++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.+|.
T Consensus 152 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~ei~p~~~sK~~al~~l~~~~---~i~~~~~~a~GD~~ND~~Ml~~a~~---- 223 (260)
T d2rbka1 152 FITEEEEKEVLPSIPT-CEIGRWYPAFADVTAKGDTKQKGIDEIIRHF---GIKLEETMSFGDGGNDISMLRHAAI---- 223 (260)
T ss_dssp CCCHHHHHHHGGGSTT-CEEECSSTTCCEEESTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE----
T ss_pred cCCHHHHHHHHHHhcc-ccceeecCcEEEEEeCCCCHHHHHHHHHHhc---cccHhheeEecCCcccHHHHHhCCe----
Confidence 0112222233222221 2344456788999999999999999999999 9999999999999999999999986
Q ss_pred CCCCCCCceEEEEeCCC----CcccceecCC--HhHHHHHHHHHH
Q 002984 802 PSLPVPPEIFACTVGRK----PSKAKYYLDD--ATDVLKLLQGLA 840 (861)
Q Consensus 802 ~~~~~~~~~~av~vG~~----~s~Aky~l~d--~~eV~~~L~~L~ 840 (861)
+|+|||+ +..|+|++.+ .++|+++|+++.
T Consensus 224 ----------svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~~~ 258 (260)
T d2rbka1 224 ----------GVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHFG 258 (260)
T ss_dssp ----------EEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHHT
T ss_pred ----------EEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHHhC
Confidence 7899997 3788898865 688999998864
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.90 E-value=1.4e-23 Score=221.89 Aligned_cols=234 Identities=18% Similarity=0.178 Sum_probs=163.9
Q ss_pred HHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-------CCceE
Q 002984 583 VSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-------MLGIA 655 (861)
Q Consensus 583 ~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-------~lgli 655 (861)
.++++.+++|+|+||+||||+.. .+..++++++++|++| +++|+.|+|+|||++..+...+..+. ....+
T Consensus 2 ~~~~~~~~ikli~~DlDGTLl~~--~~~~i~~~~~~al~~l-~~~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i 78 (283)
T d2b30a1 2 EEALKGADIKLLLIDFDGTLFVD--KDIKVPSENIDAIKEA-IEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGV 78 (283)
T ss_dssp HHHTTTCCCCEEEEETBTTTBCC--TTTCSCHHHHHHHHHH-HHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEE
T ss_pred cccCcccCccEEEEECCCCCcCC--CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceE
Confidence 46788899999999999999851 4678999999999999 68899999999999999988876531 23467
Q ss_pred ecCcEEEEeCCcce-EEecCCccChHHHHHHHHHHHHHhhcCC--CceEeeccceeE---------------------ee
Q 002984 656 AEHGYFIRWNKTSE-WETNHLGADLEWKKIVEPVMRSYTEATD--GSNIEIKESALV---------------------WH 711 (861)
Q Consensus 656 aenG~~i~~~~~~~-~~~~~~~~~~~w~~~v~~i~~~y~~~~~--gs~ie~k~~~l~---------------------~~ 711 (861)
+.||+.+....+.. +..... . .....+++.+..... ..++...+.... ..
T Consensus 79 ~~~g~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (283)
T d2b30a1 79 YINGTIVYDQIGYTLLDETIE---T---DVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIR 152 (283)
T ss_dssp EGGGTEEECTTCCEEEECCCC---H---HHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEEC
T ss_pred EEeeeEEEcCCCcEeeecccC---H---HHHHHHHHHHHhhcccceEEEEecceeEEeccchHHHHHHHHhhcccccccc
Confidence 88998887665443 332221 1 122222222211100 111111110000 00
Q ss_pred ecc-CC-ccc-------hhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEE
Q 002984 712 HQD-AD-PDF-------GSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCV 782 (861)
Q Consensus 712 ~~~-~d-~~~-------~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlai 782 (861)
..+ .. ..+ .....+++.+.+.+.+......+.++..++||.|+++||+.+++.+++++ +++.+++++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~~---~i~~~~vi~~ 229 (283)
T d2b30a1 153 HNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHY---NISNDQVLVV 229 (283)
T ss_dssp HHHHTTCCCCSEEEECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEE
T ss_pred HHHHhhcccceEEEEecCHHHHHHHHHHHHHHhcccceEEEecceeEeecCCcchhHHHHHHHhhhc---ccccceEEEe
Confidence 000 00 000 01235677777777776666677788899999999999999999999999 9999999999
Q ss_pred eCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccceecCC---HhHHHHHHHHHHhh
Q 002984 783 GDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDD---ATDVLKLLQGLATA 842 (861)
Q Consensus 783 GD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d---~~eV~~~L~~L~~~ 842 (861)
||+.||++||+.+++ +|+||+++ ..|+|++.. ...|.++|+++.+.
T Consensus 230 GD~~ND~~Ml~~a~~--------------~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~~ 282 (283)
T d2b30a1 230 GDAENDIAMLSNFKY--------------SFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL 282 (283)
T ss_dssp ECSGGGHHHHHSCSE--------------EEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred cCChhhHHHHHhCCc--------------EEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHHHHHcC
Confidence 999999999999986 78899873 677888853 34589999998764
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.90 E-value=2e-23 Score=213.59 Aligned_cols=218 Identities=18% Similarity=0.215 Sum_probs=154.4
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCcc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS 668 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~~ 668 (861)
|+|+|+||+||||++ .+..++++++++|++| ++.|+.|+++|||+...+...+..+. ..+++++||+.+...+..
T Consensus 1 kiK~i~~D~DGTL~~---~~~~i~~~~~~~l~~l-~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~ 76 (230)
T d1wr8a_ 1 KIKAISIDIDGTITY---PNRMIHEKALEAIRRA-ESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76 (230)
T ss_dssp CCCEEEEESTTTTBC---TTSCBCHHHHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEE
T ss_pred CceEEEEecCCCCcC---CCCccCHHHHHHHHHH-HhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccc
Confidence 579999999999999 7888999999999999 68899999999999999988876543 456899999998887765
Q ss_pred eEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeE
Q 002984 669 EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHI 748 (861)
Q Consensus 669 ~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~ 748 (861)
.+.... ...+. ....+...+...........+...+.+.-...+. +....+.+.+. .......+...
T Consensus 77 ~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-~~~~~~~~~~~ 143 (230)
T d1wr8a_ 77 IFLASM---DEEWI-LWNEIRKRFPNARTSYTMPDRRAGLVIMRETINV--------ETVREIINELN-LNLVAVDSGFA 143 (230)
T ss_dssp EESCCC---SHHHH-HHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCH--------HHHHHHHHHTT-CSCEEEECSSC
T ss_pred cccccc---cHHHH-HHHHHHHhcccccceeecccceeeEEEecccccH--------HHHHHHHHHhc-cceEEeeCCcE
Confidence 543222 12221 1222223332211111112222222221111111 11222222222 23456777889
Q ss_pred EEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Ccccce
Q 002984 749 VEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKY 824 (861)
Q Consensus 749 vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky 824 (861)
+|+.|++++|+.+++++++++ |++++++++|||+.||++||+.+|. +|+||++ +..|+|
T Consensus 144 iei~~~~~~K~~al~~l~~~~---~i~~~~~~~iGD~~NDi~ml~~ag~--------------~vav~na~~~~k~~A~~ 206 (230)
T d1wr8a_ 144 IHVKKPWINKGSGIEKASEFL---GIKPKEVAHVGDGENDLDAFKVVGY--------------KVAVAQAPKILKENADY 206 (230)
T ss_dssp EEEECTTCCHHHHHHHHHHHH---TSCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHTTCSE
T ss_pred EEEeeCCcCcchhhccccccc---ccchhheeeeecCccHHHHHHHCCe--------------EEEECCCCHHHHHhCCE
Confidence 999999999999999999999 9999999999999999999999985 7899987 477899
Q ss_pred ecCC--HhHHHHHHHHHHh
Q 002984 825 YLDD--ATDVLKLLQGLAT 841 (861)
Q Consensus 825 ~l~d--~~eV~~~L~~L~~ 841 (861)
++++ .++|++.|+.+..
T Consensus 207 v~~~~~~~gv~~~i~~~l~ 225 (230)
T d1wr8a_ 207 VTKKEYGEGGAEAIYHILE 225 (230)
T ss_dssp ECSSCHHHHHHHHHHHHHH
T ss_pred EECCCCcCHHHHHHHHHHH
Confidence 9865 4678888887654
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.90 E-value=2e-23 Score=214.53 Aligned_cols=214 Identities=14% Similarity=0.105 Sum_probs=154.5
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCcc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS 668 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~~ 668 (861)
|+|+|+||+||||++ ....+++++.++|++| ++.|+.|+++|||+...+..+...++ ...++++||+.+..++..
T Consensus 2 miKli~~D~DGTL~~---~~~~i~~~~~~al~~l-~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~ 77 (225)
T d1l6ra_ 2 MIRLAAIDVDGNLTD---RDRLISTKAIESIRSA-EKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77 (225)
T ss_dssp CCCEEEEEHHHHSBC---TTSCBCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSC
T ss_pred CeEEEEEecCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCcc
Confidence 789999999999999 7899999999999999 68899999999999998877765443 456889999998887766
Q ss_pred eEEecCCccChHHHHHHHHHHHHHhhcCCCceEeecc-ceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCe
Q 002984 669 EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKE-SALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQH 747 (861)
Q Consensus 669 ~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~-~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~ 747 (861)
.+..... +....+.+.......-..+.... ....+.+ ..++ +..+.+..........+..+..
T Consensus 78 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~i~~~~~ 141 (225)
T d1l6ra_ 78 IKKFFSN-------EGTNKFLEEMSKRTSMRSILTNRWREASTGF-DIDP--------EDVDYVRKEAESRGFVIFYSGY 141 (225)
T ss_dssp EEESSCS-------HHHHHHHHHHTTTSSCBCCGGGGGCSSSEEE-BCCG--------GGHHHHHHHHHTTTEEEEEETT
T ss_pred EEEecCh-------HHHHHHHHHHHHhcCcceeecccceeeeecc-ccCH--------HHHHHHHHHHhhcCcEEEECCc
Confidence 6543322 11222232222211110000000 0001111 0111 1223333344455677888889
Q ss_pred EEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Ccccc
Q 002984 748 IVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAK 823 (861)
Q Consensus 748 ~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Ak 823 (861)
.+|+.|++++|+.+++++++++ |+++++|++||||.||++||+.++. +|+|||+ +..|+
T Consensus 142 ~~~i~~~~~~K~~ai~~l~~~~---~i~~~~v~~~GDs~nD~~m~~~a~~--------------~vav~na~~~~k~~ad 204 (225)
T d1l6ra_ 142 SWHLMNRGEDKAFAVNKLKEMY---SLEYDEILVIGDSNNDMPMFQLPVR--------------KACPANATDNIKAVSD 204 (225)
T ss_dssp EEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHTSSSE--------------EEECTTSCHHHHHHCS
T ss_pred EEEecCCccchHHHHHHHhhhh---ccchhheeeecCCcchHHHHHHCCe--------------EEEECCCcHHHHHhCC
Confidence 9999999999999999999999 9999999999999999999999985 7899886 36788
Q ss_pred eecC--CHhHHHHHHHHHH
Q 002984 824 YYLD--DATDVLKLLQGLA 840 (861)
Q Consensus 824 y~l~--d~~eV~~~L~~L~ 840 (861)
|+++ +.++|+++|+.+.
T Consensus 205 ~v~~~~~~~gi~~~l~~~~ 223 (225)
T d1l6ra_ 205 FVSDYSYGEEIGQIFKHFE 223 (225)
T ss_dssp EECSCCTTHHHHHHHHHTT
T ss_pred EEECCCCcCHHHHHHHHhC
Confidence 9885 4588999998763
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.88 E-value=9.9e-22 Score=224.62 Aligned_cols=315 Identities=17% Similarity=0.155 Sum_probs=210.1
Q ss_pred HhHHHHHHHHHHHHHHHHHHc---CCCCCEEEEeCcccccHHHHHH-hhcCCCeEEEEEecCCC----ChHHHhcCC---
Q 002984 175 VLWQAYVSANKIFADKVMEVI---NPDDDCVWVHDYHLMVLPTFLR-KRFNRIKLGFFLHSPFP----SSEIYRTLP--- 243 (861)
Q Consensus 175 ~~w~~Y~~vN~~fa~~v~~~~---~p~~D~VwvhDyhl~llp~~lr-~~~~~~~i~~flH~PfP----~~e~f~~lp--- 243 (861)
..|..|...++.+++.+.+.. +| |+|++||+|-.+.+.+++ .+.+.+++.+++|.... ....+..+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~p--DIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~ 183 (477)
T d1rzua_ 106 DNWKRFAALSLAAARIGAGVLPGWRP--DMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPA 183 (477)
T ss_dssp THHHHHHHHHHHHHHHHTTCSSSCCC--SEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCG
T ss_pred ccHHHHHHHHHHHHhhhhhcccCCCC--CEEEecchhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcch
Confidence 468889999988887665543 45 999999999999998886 45678999999996421 111221111
Q ss_pred ------------chHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHH
Q 002984 244 ------------VRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRL 311 (861)
Q Consensus 244 ------------~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~ 311 (861)
...-+..++..+|.+-.-+..|++..+..-. ..+.+.- ...+..++.++|+|+|.+.|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~vi~ngv~~~~~ 253 (477)
T d1rzua_ 184 HAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEF-GMGLEGV---------IGSRAHVLHGIVNGIDADVW 253 (477)
T ss_dssp GGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHH-HTTCHHH---------HHTTGGGEEECCCCBCTTTS
T ss_pred hhcccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHHhc-Ccchhhh---------hhhccccEEEEECCcchhhc
Confidence 1123345677899998888888776653211 0111100 01122356778999998877
Q ss_pred HHhhCC-----------chhHHHHHHHHHHc----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 002984 312 ESVLNL-----------PATATKIKEIEKQF----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIV 376 (861)
Q Consensus 312 ~~~~~~-----------~~~~~~~~~l~~~~----~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~ 376 (861)
.+.... .......+.++..+ .++++|++++|+++.||+..+++|+++++++++. |+.+|
T Consensus 254 ~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~------l~~~G 327 (477)
T d1rzua_ 254 NPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGR------LVVLG 327 (477)
T ss_dssp CTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCE------EEEEE
T ss_pred cccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCe------EEEEe
Confidence 432110 01122233344443 3467999999999999999999999999887543 55566
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecC
Q 002984 377 NPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQG 456 (861)
Q Consensus 377 ~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~ 456 (861)
.+ +.. ...++.++..+.+ ..+.+.+..+.+++..+|+.||+||+||.+||||+|++|||+|
T Consensus 328 ~G---~~~----~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~--- 388 (477)
T d1rzua_ 328 AG---DVA----LEGALLAAASRHH---------GRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRY--- 388 (477)
T ss_dssp CB---CHH----HHHHHHHHHHHTT---------TTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH---
T ss_pred cC---Cch----HHHHHHHHHhhcC---------CeEEEEcccChhHHHHHHHhCccccCCccccCCCHHHHHHHHc---
Confidence 32 222 2223333333332 1234555678889999999999999999999999999999999
Q ss_pred CCcccccccCCCCCCCCceEEeccCCCCcccCC------------CceEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHH
Q 002984 457 TPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS------------GAIRVNPWDIDAVADAMTLAINM--RDSEKQLRHE 522 (861)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------------~ai~vnP~d~~~~A~ai~~aL~m--~~~e~~~r~~ 522 (861)
|.|+|+|..+|..+.+. .|++|+|.|++++|++|.++|+. .++.++.+.+
T Consensus 389 ----------------G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~ 452 (477)
T d1rzua_ 389 ----------------GCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQK 452 (477)
T ss_dssp ----------------TCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred ----------------CCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHH
Confidence 66799999999998772 47999999999999999999863 3333333322
Q ss_pred HhhhhhccCCHhHHHHHHHHHH
Q 002984 523 KHYRYVSTHDVAYWARSFAQDL 544 (861)
Q Consensus 523 ~~~~~v~~~~~~~W~~~fl~~l 544 (861)
+.. -..+++..-++++++-.
T Consensus 453 ~a~--~~~fsw~~~a~~~~~lY 472 (477)
T d1rzua_ 453 LGM--KSDVSWEKSAGLYAALY 472 (477)
T ss_dssp HHH--TCCCBHHHHHHHHHHHH
T ss_pred HHH--HhhCCHHHHHHHHHHHH
Confidence 221 13477777777665533
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.88 E-value=1.1e-21 Score=219.79 Aligned_cols=290 Identities=16% Similarity=0.153 Sum_probs=211.1
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCCh---HHHhc------C--CchHHHHHHhhcCCEEeecChHhHH
Q 002984 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS---EIYRT------L--PVRDEILRGLLNCDLIGFHTFDYAR 267 (861)
Q Consensus 199 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~f~~------l--p~r~~il~~ll~~dligF~t~~~~~ 267 (861)
.|+|++|+++..+++.++.+. .+.++.+.+|..++.. ..+.. . +.......++..+|.+...+..++.
T Consensus 121 pDiIh~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~ 199 (437)
T d2bisa1 121 PDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLI 199 (437)
T ss_dssp CSEEEEETGGGHHHHHHHHHH-HCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHH
T ss_pred CCEEEECChhhhhHhhhhhcc-ccCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhhh
Confidence 389999999988777777654 5789999999887642 11111 1 1122334455678888887765554
Q ss_pred HHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc--CCCeEEEeecCccc
Q 002984 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMDI 345 (861)
Q Consensus 268 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~Vdrld~ 345 (861)
.... .++.. ..++.++|+|+|++.|......+........+++++ .++++|+++||++.
T Consensus 200 ~~~~----~~~~~---------------~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~ 260 (437)
T d2bisa1 200 DEWG----FFRNF---------------EGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDR 260 (437)
T ss_dssp HTHH----HHGGG---------------TTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCS
T ss_pred hhhh----hhccc---------------cCceEEEecccccccccccccchhhHHHHHhhhhhhhccCCceEEEeecccc
Confidence 3322 11110 113567899999998876655555555556666766 56789999999975
Q ss_pred -ccCHHHHHHHHHHHHHh--CCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHH
Q 002984 346 -FKGISLKLLAMEQLLQQ--HPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRF 422 (861)
Q Consensus 346 -~KGi~~~l~Af~~ll~~--~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~ 422 (861)
.||+..+++|++.+.++ +|+ +.|+.+|... +.+....+.+. . . ...++++.+.++.+
T Consensus 261 ~~Kg~~~ll~a~~~~~~~~~~~~----~~lvi~G~~~----~~~~~~~~~~~---~----~-----~~~~~~~~~~~~~~ 320 (437)
T d2bisa1 261 GQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKGD----PELEGWARSLE---E----K-----HGNVKVITEMLSRE 320 (437)
T ss_dssp SSSCHHHHHHHHHHHTTSGGGGG----EEEEEECCBC----HHHHHHHHHHH---H----T-----CTTEEEECSCCCHH
T ss_pred cchhHHHHHhhhccccccccccc----ceeeeecccc----cccccchhhhc---c----c-----cccceeccccCcHH
Confidence 79999999999988653 354 4488887321 22222222222 1 1 12466788899999
Q ss_pred HHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC--CceEeCCCCHH
Q 002984 423 EKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS--GAIRVNPWDID 500 (861)
Q Consensus 423 el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~vnP~d~~ 500 (861)
++..+|+.||++++||..||+|++++|||+| |.|+|+|..+|+.+.+. .|++|+|.|++
T Consensus 321 ~~~~~~~~adi~v~~s~~e~~~~~~~Eama~-------------------G~Pvi~~~~g~~~e~i~~~~G~~~~~~d~~ 381 (437)
T d2bisa1 321 FVRELYGSVDFVIIPSYFEPFGLVALEAMCL-------------------GAIPIASAVGGLRDIITNETGILVKAGDPG 381 (437)
T ss_dssp HHHHHHTTCSEEEECCSCCSSCHHHHHHHTT-------------------TCEEEEESCTTHHHHCCTTTCEEECTTCHH
T ss_pred HHHHHHhhhccccccccccccchHHHHHHHC-------------------CCCEEEeCCCCcHHhEECCcEEEECCCCHH
Confidence 9999999999999999999999999999999 56789999888887663 48999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHH
Q 002984 501 AVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (861)
Q Consensus 501 ~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 547 (861)
++|++|.++|+++++.++...++.++.++.+++.++++++++-.+++
T Consensus 382 ~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~ 428 (437)
T d2bisa1 382 ELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGS 428 (437)
T ss_dssp HHHHHHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999999998777777777777888888899999998888755543
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.88 E-value=2.9e-23 Score=214.47 Aligned_cols=224 Identities=19% Similarity=0.117 Sum_probs=138.6
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCcc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS 668 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~~ 668 (861)
|+|+||+|+||||++ ... +++++++|+++ ++.|+.|+++|||++..+..++..++ ..+++++||+.+...++.
T Consensus 1 miKli~~DlDGTLl~---~~~--~~~~~~ai~~l-~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 74 (243)
T d1wzca1 1 MIRLIFLDIDKTLIP---GYE--PDPAKPIIEEL-KDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGY 74 (243)
T ss_dssp CEEEEEECCBTTTBS---SSC--SGGGHHHHHHH-HHTTEEEEEECSSCHHHHHHHHHHHTCCSCEEETTTTEEEECTTC
T ss_pred CcEEEEEeCCCCCCC---CCC--CHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHhcccccccccCCcEEEcCCCc
Confidence 689999999999998 443 57899999999 78999999999999999999998765 346899999999987654
Q ss_pred eEEecCCcc-----------Ch-HHHHHHHHHHHHHhhcCCCceEeeccceeEeeecc------CCccchhccHHHHHHH
Q 002984 669 EWETNHLGA-----------DL-EWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQD------ADPDFGSCQAKELLDH 730 (861)
Q Consensus 669 ~~~~~~~~~-----------~~-~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~------~d~~~~~~~a~el~~~ 730 (861)
......... .. .+.......-..|... .................. ....+...........
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (243)
T d1wzca1 75 FPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLK-YYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDG 153 (243)
T ss_dssp CC----------CEEEECSCCHHHHHHHHHHHHHHHTCB-CGGGSCHHHHHHHHCCCGGGHHHHTCCSSEEEECBCSSSC
T ss_pred eecccchhHHHHHHHHHHhhhHHHHHHHHHhhhhhcccc-hhhhhhHHHHHHhhcCchhHHHHHHhhhcchhhhhhhhHH
Confidence 322111100 00 0111111111111110 000000000000000000 0000000000000000
Q ss_pred HHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCce
Q 002984 731 LESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEI 810 (861)
Q Consensus 731 L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~ 810 (861)
+.+........+..+ ..+++.|++++|+.|++++++++. ++++++++||||+.||++||+.+|.
T Consensus 154 ~~~~~~~~~~~~~~~-~~~~~~~~~~~K~~al~~l~~~~~--~~~~~~~~a~GD~~ND~~Ml~~a~~------------- 217 (243)
T d1wzca1 154 WEEVLVEGGFKVTMG-SRFYTVHGNSDKGKAAKILLDFYK--RLGQIESYAVGDSYNDFPMFEVVDK------------- 217 (243)
T ss_dssp HHHHHHHTTCEEEEC-SSSEEEECSCCHHHHHHHHHHHHH--TTSCEEEEEEECSGGGHHHHTTSSE-------------
T ss_pred HHHhhhhcCeEEeec-ccccchhhhhccHHHHHHHHHHhc--CCCcccEEEEcCCHhHHHHHHcCCc-------------
Confidence 111112223344444 347899999999999999999982 3788999999999999999999996
Q ss_pred EEEEeCCCCcccceecCCHhHHHHHHH
Q 002984 811 FACTVGRKPSKAKYYLDDATDVLKLLQ 837 (861)
Q Consensus 811 ~av~vG~~~s~Aky~l~d~~eV~~~L~ 837 (861)
+|+|||+...++-.+++..|+.++++
T Consensus 218 -~va~~Na~~~~~~~~~~i~~~~~~i~ 243 (243)
T d1wzca1 218 -VFIVGSLKHKKAQNVSSIIDVLEVIK 243 (243)
T ss_dssp -EEEESSCCCTTCEEESCHHHHHHHHT
T ss_pred -EEEeCCCChHHHhhhhHHHHHHHhhC
Confidence 79999998888888999988888763
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.86 E-value=2.2e-22 Score=208.93 Aligned_cols=211 Identities=16% Similarity=0.183 Sum_probs=140.8
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccC---CceEecCcEEEEeCC
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM---LGIAAEHGYFIRWNK 666 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~---lgliaenG~~i~~~~ 666 (861)
++.+|++|+||||++ .++.+ +..+++.++ +.+|+.|+++|||++..+.+++..+.. ..++++||+.+....
T Consensus 2 ~~~li~~DlDGTL~~---~~~~~--~~~~~~~~~-~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~ 75 (244)
T d1s2oa1 2 RQLLLISDLDNTWVG---DQQAL--EHLQEYLGD-RRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPE 75 (244)
T ss_dssp CSEEEEECTBTTTBS---CHHHH--HHHHHHHHT-TGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETT
T ss_pred CceEEEEECcccCCC---CCCCH--HHHHHHHHH-HcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEcc
Confidence 456888999999998 44433 455666676 688999999999999999998876432 247899999888765
Q ss_pred cceEEecCCccChHHHHHH-----HHHHHHHhhcCCCceEe----eccceeEeeeccCCccchhccHHHHHHHHHHHhcC
Q 002984 667 TSEWETNHLGADLEWKKIV-----EPVMRSYTEATDGSNIE----IKESALVWHHQDADPDFGSCQAKELLDHLESVLAN 737 (861)
Q Consensus 667 ~~~~~~~~~~~~~~w~~~v-----~~i~~~y~~~~~gs~ie----~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~ 737 (861)
... ..|.+.. ...+..+....++.... .....+.+.+..... .+..+.+.+.+..
T Consensus 76 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 139 (244)
T d1s2oa1 76 GLD---------QHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPWKISYHLDPQAC-------PTVIDQLTEMLKE 139 (244)
T ss_dssp EEC---------HHHHHHHHTTCCHHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSC-------THHHHHHHHHHHT
T ss_pred Ccc---------hHHHHHHHHHHhHHHHHHHHhhcccccccChhhhcceEEEEecccccc-------HHHHHHHHHHHHh
Confidence 422 1122211 11222333333332222 222334444332221 1233333333332
Q ss_pred ---CCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEE
Q 002984 738 ---EPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACT 814 (861)
Q Consensus 738 ---~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~ 814 (861)
.......+...+||.|++++||.|++++++++ |++.+++++||||.||++||+.+|+ +|+
T Consensus 140 ~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~---gi~~~~~v~~GD~~ND~~Ml~~~~~--------------~va 202 (244)
T d1s2oa1 140 TGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHL---AMEPSQTLVCGDSGNDIGLFETSAR--------------GVI 202 (244)
T ss_dssp SSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHTSSSE--------------EEE
T ss_pred hcccceeeecCCcEEEEEeCccchhHHHHHHHHhc---cCChhhEEEEcCCCCCHHHHhhCCc--------------EEE
Confidence 22455677889999999999999999999999 9999999999999999999999986 899
Q ss_pred eCCCC----cccc-------eecC--CHhHHHHHHHHH
Q 002984 815 VGRKP----SKAK-------YYLD--DATDVLKLLQGL 839 (861)
Q Consensus 815 vG~~~----s~Ak-------y~l~--d~~eV~~~L~~L 839 (861)
|||+. ..|+ |... ..++|++.|+.+
T Consensus 203 v~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~f 240 (244)
T d1s2oa1 203 VRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAHF 240 (244)
T ss_dssp CTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHHT
T ss_pred eCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHHHh
Confidence 99864 3333 3332 356777777764
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=9.8e-22 Score=200.88 Aligned_cols=210 Identities=15% Similarity=0.091 Sum_probs=132.5
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc--CCceEecCcEEEEeCCcc
Q 002984 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE--MLGIAAEHGYFIRWNKTS 668 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~--~lgliaenG~~i~~~~~~ 668 (861)
..+||+|+||||++ .++.++++++++|++| +++|+.|+++|||+...+.+.+..+. ...++++||+.+......
T Consensus 4 ~~li~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 79 (232)
T d1xvia_ 4 PLLVFSDLDGTLLD---SHSYDWQPAAPWLTRL-REANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQW 79 (232)
T ss_dssp CEEEEEECTTTTSC---SSCCSCCTTHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTC
T ss_pred CEEEEEECCCCccC---CcCcCCHHHHHHHHHH-HHCCCEEEEEeCCChhhchhHHHHhccCCceEEccCCeEEEecCCc
Confidence 34899999999999 7788999999999999 78999999999999999999988754 456999999999876542
Q ss_pred eEEecC----CccChHHHHHHHHHHH-HHhhcCCC-ceEeeccceeEeee----------ccCCccchhccHHHHHHHHH
Q 002984 669 EWETNH----LGADLEWKKIVEPVMR-SYTEATDG-SNIEIKESALVWHH----------QDADPDFGSCQAKELLDHLE 732 (861)
Q Consensus 669 ~~~~~~----~~~~~~w~~~v~~i~~-~y~~~~~g-s~ie~k~~~l~~~~----------~~~d~~~~~~~a~el~~~L~ 732 (861)
...... ......+......... .+...... .............+ .............+....+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (232)
T d1xvia_ 80 QEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFT 159 (232)
T ss_dssp TTSTTTTEEECSSCHHHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHH
T ss_pred cccchhhhhhhHHHHHHHHHhhhhhhhhhccccccccchhhhhhhhhhcccchhhhhhhhcceeeeecccccHHHHHHHH
Confidence 211110 0111111111111111 11000000 00000000000000 00000000011122333333
Q ss_pred HHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEE
Q 002984 733 SVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFA 812 (861)
Q Consensus 733 ~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~a 812 (861)
.........+..+...+++.|++++|+.|+++|++.+...|++++++++|||+.||++||+.+|+ +
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~--------------~ 225 (232)
T d1xvia_ 160 ARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDY--------------A 225 (232)
T ss_dssp HHHHHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSE--------------E
T ss_pred HHhhhccceeeeccceeeccCCCchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCe--------------E
Confidence 34444556677778889999999999999999998653348999999999999999999999996 7
Q ss_pred EEeCCC
Q 002984 813 CTVGRK 818 (861)
Q Consensus 813 v~vG~~ 818 (861)
|+|.|+
T Consensus 226 vaV~n~ 231 (232)
T d1xvia_ 226 VIVKGL 231 (232)
T ss_dssp EECCCC
T ss_pred EEEeCC
Confidence 788764
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=1.2e-19 Score=186.20 Aligned_cols=216 Identities=15% Similarity=0.125 Sum_probs=136.0
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc---cCCceEecCcEEEEeCC
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC---EMLGIAAEHGYFIRWNK 666 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~---~~lgliaenG~~i~~~~ 666 (861)
..||++||+||||++ +++.++++++++|+++ ++.| .++++|||+...+...+... ....++..+|+++...+
T Consensus 2 ~~kl~~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~g-~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T d2amya1 2 GPALCLFDVDGTLTA---PRQKITKEMDDFLQKL-RQKI-KIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDG 76 (243)
T ss_dssp CSEEEEEESBTTTBC---TTSCCCHHHHHHHHHH-TTTS-EEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETT
T ss_pred CCEEEEEcCcCCeeC---CCCcCCHHHHHHHHHH-HcCC-CEEEEcCCChHHhHHHHhhhccccceEEecCcEEEEecCC
Confidence 468999999999999 7899999999999998 6666 68899999998888776542 12334556777777776
Q ss_pred cceEEecCCccC-hH-HHHHHHHHHHHHhhcCCC----ceEeeccceeEeeeccCCccc-----------hhccHHHHHH
Q 002984 667 TSEWETNHLGAD-LE-WKKIVEPVMRSYTEATDG----SNIEIKESALVWHHQDADPDF-----------GSCQAKELLD 729 (861)
Q Consensus 667 ~~~~~~~~~~~~-~~-w~~~v~~i~~~y~~~~~g----s~ie~k~~~l~~~~~~~d~~~-----------~~~~a~el~~ 729 (861)
...+........ .. +..........+...... ...+.......+......... ......+..+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (243)
T d2amya1 77 KLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVA 156 (243)
T ss_dssp EEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred ccceecchhHHHHHHHHHHHHhhhhhhheeccccccccchhhhhhhhhcccccccccchhhhhhhhhhhcchhhhHHHHH
Confidence 666654332111 11 111111111111111111 111222222222211111110 0122345555
Q ss_pred HHHHHhcCCCE-EEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeC----CcchHHHHHHccccCCCCCC
Q 002984 730 HLESVLANEPA-VVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGD----DRSDEDMFESILSTVSGPSL 804 (861)
Q Consensus 730 ~L~~~l~~~~~-~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~~~~~~ 804 (861)
.+.+.+..... ...++..++||.|+++|||.|+++|+ +++++++++||| |.||++||+.+|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~l~------~~~~~ev~afGD~~~~g~NDi~Ml~~~g~------- 223 (243)
T d2amya1 157 DLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVE------NDGYKTIYFFGDKTMPGGNDHEIFTDPRT------- 223 (243)
T ss_dssp HHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTT------TSCCSEEEEEECSCC---CCCHHHHCTTE-------
T ss_pred HHHHHhcccceEEEecCCccceeeccccCHHHHHHHHh------CCCcceEEEEcCCCCCCCCcHHHHHccCC-------
Confidence 56655555444 55677899999999999999999884 578899999999 6799999999984
Q ss_pred CCCCceEEEEeCCCCcccceecCCHhHHHHHHHHHH
Q 002984 805 PVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGLA 840 (861)
Q Consensus 805 ~~~~~~~av~vG~~~s~Aky~l~d~~eV~~~L~~L~ 840 (861)
.+++ +++++++.++++.|+
T Consensus 224 ------~~~~-----------v~~~~~~~~~~~~l~ 242 (243)
T d2amya1 224 ------MGYS-----------VTAPEDTRRICELLF 242 (243)
T ss_dssp ------EEEE-----------CSSHHHHHHHHHHHC
T ss_pred ------cEEE-----------eCCHHHHHHHHHHHh
Confidence 2443 456888998888875
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.80 E-value=7.8e-20 Score=183.47 Aligned_cols=186 Identities=16% Similarity=0.163 Sum_probs=146.0
Q ss_pred cCCchHHHHhhCCchhHHHHHHHHHHc--CCCeEEEeecCcc-cccCHHHHHHHHHHHHHh--CCCCCCcEEEEEEecCC
Q 002984 305 GVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMD-IFKGISLKLLAMEQLLQQ--HPGMRGKVVLVQIVNPA 379 (861)
Q Consensus 305 GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~Vdrld-~~KGi~~~l~Af~~ll~~--~P~~~~~vvLvqi~~p~ 379 (861)
|||.+.|.+........+....++++| +++++|++|||++ +.||+..+++|++.+.++ +|+ +.|+.+|..
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~----~~l~i~G~g- 75 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKG- 75 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG----EEEEEECCB-
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCCC----eEEEEEeec-
Confidence 899999987666566677778888887 6788999999997 589999999999999754 344 558888732
Q ss_pred CCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCc
Q 002984 380 RGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPI 459 (861)
Q Consensus 380 r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~ 459 (861)
.+.++.+. ..+... + ..++++.+.++.+++..+|+.||++|+||..||+|++.+|||+|
T Consensus 76 ---~~~~~~~~---~~~~~~----~-----~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~------ 134 (196)
T d2bfwa1 76 ---DPELEGWA---RSLEEK----H-----GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL------ 134 (196)
T ss_dssp ---CHHHHHHH---HHHHHH----C-----TTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT------
T ss_pred ---ccchhhhh---hhhhhc----c-----ceeEEeeeccccccchhccccccccccccccccccccchhhhhc------
Confidence 13333333 332222 2 23667888999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCceEEeccCCCCcccCC--CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhc
Q 002984 460 MDEALGRERDSPHTSMLVVSEFIGCSPSLS--GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVS 529 (861)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~ 529 (861)
+.|+|+|..+|..+.+. .|++++|.|+++++++|.++|.+..+.+....+..++++.
T Consensus 135 -------------G~pvI~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~ 193 (196)
T d2bfwa1 135 -------------GAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAM 193 (196)
T ss_dssp -------------TCEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred -------------CceeeecCCCccceeecCCceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 56788888888777664 4799999999999999999999887766555555555443
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=5.5e-19 Score=180.73 Aligned_cols=203 Identities=18% Similarity=0.192 Sum_probs=119.9
Q ss_pred eEEE-ecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc-cc----CCceEecCcEEEEeC
Q 002984 592 RAIF-LDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP-CE----MLGIAAEHGYFIRWN 665 (861)
Q Consensus 592 klI~-~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~-~~----~lgliaenG~~i~~~ 665 (861)
|+|+ ||+||||++ +++.++++++++|+++ ++.|+ ++++|||........+.. ++ ..++++.+|..+...
T Consensus 1 k~i~lFDlDGTLl~---~~~~is~~~~~~i~~l-~~~g~-~~i~tgrr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 75 (244)
T d2fuea1 1 RVLCLFDVDGTLTP---ARQKIDPEVAAFLQKL-RSRVQ-IGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKH 75 (244)
T ss_dssp CEEEEEESBTTTBS---TTSCCCHHHHHHHHHH-TTTSE-EEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEET
T ss_pred CEEEEEccccCccC---CCCcCCHHHHHHHHHH-HhCCC-EEEEecCChhhhhhhhhhhhccccccceeecccceeeccC
Confidence 4555 699999999 7889999999999999 67885 556677766655544433 21 345778899888887
Q ss_pred CcceEEecCCccCh-HHHH-HHHHHHHHHhhcCC----CceEeeccceeEeeeccCCccc-----------hhccHHHHH
Q 002984 666 KTSEWETNHLGADL-EWKK-IVEPVMRSYTEATD----GSNIEIKESALVWHHQDADPDF-----------GSCQAKELL 728 (861)
Q Consensus 666 ~~~~~~~~~~~~~~-~w~~-~v~~i~~~y~~~~~----gs~ie~k~~~l~~~~~~~d~~~-----------~~~~a~el~ 728 (861)
+...+......... .... .............. ..+.........++........ ......+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (244)
T d2fuea1 76 GRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFV 155 (244)
T ss_dssp TEECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHH
T ss_pred CccceeechhHHHhhhHHHHHHhhhhhhhheecccccccchhhhhhhhhhccccccccchhhhhhhhhhccchhhHHHHH
Confidence 76555433211100 0111 11111111111111 1111222222222222111110 001122333
Q ss_pred HHHHHHhcCCC-EEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCc----chHHHHHHccccCCCCC
Q 002984 729 DHLESVLANEP-AVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDR----SDEDMFESILSTVSGPS 803 (861)
Q Consensus 729 ~~L~~~l~~~~-~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~----ND~~Mf~~ag~~~~~~~ 803 (861)
+.+........ ....++..++||.|+++|||.|+++|++ .+.++|++|||+. ||++||+.+|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~L~~------~~~~ev~afGD~~~~G~ND~eml~~a~~------ 223 (244)
T d2fuea1 156 EALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQ------DSFDTIHFFGNETSPGGNDFEIFADPRT------ 223 (244)
T ss_dssp HHHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHHTT------SCCSEEEEEESCCSTTSTTHHHHHSTTS------
T ss_pred HHHHHHhhccceeEeeccCccceecchhccHHHHHHHHhc------CChhhEEEEcCCCCCCCCcHHHHHcCCC------
Confidence 33433333333 3445678899999999999999999874 4789999999975 99999999984
Q ss_pred CCCCCceEEEEeCCC
Q 002984 804 LPVPPEIFACTVGRK 818 (861)
Q Consensus 804 ~~~~~~~~av~vG~~ 818 (861)
.+++|+|+
T Consensus 224 -------~~~av~na 231 (244)
T d2fuea1 224 -------VGHSVVSP 231 (244)
T ss_dssp -------EEEECSSH
T ss_pred -------cEEEcCCH
Confidence 37888764
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.73 E-value=1.7e-18 Score=187.66 Aligned_cols=200 Identities=16% Similarity=0.183 Sum_probs=147.8
Q ss_pred EEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 002984 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (861)
Q Consensus 298 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvq 374 (861)
++.++|+|||++.+..... +. ....+++.+ .+++++++++|+.+.||+..+++|++++.+++|+.. ++.
T Consensus 160 ~i~vi~~gv~~~~~~~~~~-~~---~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~----~~i 231 (370)
T d2iw1a1 160 RFQILPPGIYPDRKYSEQI-PN---SREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LLF 231 (370)
T ss_dssp GEEECCCCCCGGGSGGGSC-TT---HHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EEE
T ss_pred eEEEEEeecccccccccCc-hh---hhhhhhhccCCCccceEEEEEeccccccchhhhcccccccccccccce----eee
Confidence 3567899999887653322 22 223445554 578999999999999999999999999988887654 555
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeee
Q 002984 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (861)
Q Consensus 375 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~ 454 (861)
++... . + ++++ +++++.+. ...+.+.++ .+++..+|+.||++|+||..||||++++|||+|
T Consensus 232 i~g~~--~-~--~~~~----~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~- 292 (370)
T d2iw1a1 232 VVGQD--K-P--RKFE----ALAEKLGV-------RSNVHFFSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITA- 292 (370)
T ss_dssp EESSS--C-C--HHHH----HHHHHHTC-------GGGEEEESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHH-
T ss_pred ccccc--c-c--cccc----cccccccc-------ccccccccc--ccccccccccccccccccccccccceeeecccC-
Confidence 55322 1 1 2233 33444321 223344554 468999999999999999999999999999999
Q ss_pred cCCCcccccccCCCCCCCCceEEeccCCCCcccCC---Cc-eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhcc
Q 002984 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GA-IRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (861)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~a-i~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~ 530 (861)
|.|+|+|..+|..+.+. .| ++++|.|++++|++|.++|+ .++.++...++.++++.+
T Consensus 293 ------------------G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~-d~~~~~~~~~~ar~~~~~ 353 (370)
T d2iw1a1 293 ------------------GLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALT-QSPLRMAWAENARHYADT 353 (370)
T ss_dssp ------------------TCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHH
T ss_pred ------------------CeeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHH
Confidence 55699999999888872 34 55689999999999999998 445566667778889988
Q ss_pred CCHhHHHHHHHHH
Q 002984 531 HDVAYWARSFAQD 543 (861)
Q Consensus 531 ~~~~~W~~~fl~~ 543 (861)
++...|.+...+-
T Consensus 354 ~~~~~~~~~~~~i 366 (370)
T d2iw1a1 354 QDLYSLPEKAADI 366 (370)
T ss_dssp SCCSCHHHHHHHH
T ss_pred hChhHHHHHHHHH
Confidence 9888998765543
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.58 E-value=1.3e-15 Score=148.03 Aligned_cols=141 Identities=17% Similarity=0.179 Sum_probs=110.4
Q ss_pred eEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEE
Q 002984 335 KLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVL 414 (861)
Q Consensus 335 ~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~ 414 (861)
.++|+|||+++.||+...++|++++ |+.+ |+.+|..+ +++..+.+.+++.+. +. +.+.
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~----l~ivg~~~--~~~~~~~~~~~~~~~--------~~----~~v~ 70 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS--KGDHAERYARKIMKI--------AP----DNVK 70 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC--TTSTHHHHHHHHHHH--------SC----TTEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh----cCCe----EEEEEecc--cccchhhhhhhhccc--------cc----CcEE
Confidence 5688999999999999999999765 6655 67777543 334445555544321 11 2234
Q ss_pred EcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---Cc
Q 002984 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GA 491 (861)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~a 491 (861)
+.+.++.+++..+|+.||++|.||..||+|++++|||+| +.|+|+|..+|+.+.+. .+
T Consensus 71 ~~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~-------------------g~pvi~s~~~~~~e~i~~~~~g 131 (166)
T d2f9fa1 71 FLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMAS-------------------GKPVIAVNEGGFKETVINEKTG 131 (166)
T ss_dssp EEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHT-------------------TCCEEEESSHHHHHHCCBTTTE
T ss_pred Eeecccccccccccccccccccccccccccccccccccc-------------------cccceeecCCcceeeecCCccc
Confidence 567999999999999999999999999999999999999 45699999999888772 35
Q ss_pred eEeCCCCHHHHHHHHHHHhcCCHHHH
Q 002984 492 IRVNPWDIDAVADAMTLAINMRDSEK 517 (861)
Q Consensus 492 i~vnP~d~~~~A~ai~~aL~m~~~e~ 517 (861)
+.+++ |+++++++|.++++.++..+
T Consensus 132 ~~~~~-d~~~~~~~i~~l~~~~~~~~ 156 (166)
T d2f9fa1 132 YLVNA-DVNEIIDAMKKVSKNPDKFK 156 (166)
T ss_dssp EEECS-CHHHHHHHHHHHHHCTTTTH
T ss_pred ccCCC-CHHHHHHHHHHHHhCHHHHH
Confidence 66655 99999999999999875443
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.39 E-value=1.9e-14 Score=143.13 Aligned_cols=72 Identities=8% Similarity=0.053 Sum_probs=58.7
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Ccccceec-CC
Q 002984 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYL-DD 828 (861)
Q Consensus 754 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l-~d 828 (861)
....|+...+.+++++ ++++++|+||||+.||++||+.||. +|+++++ +..|+|.+ ++
T Consensus 126 ~~~~~~~~~~~~~~~~---~i~~~eviaiGDg~NDi~Ml~~Ag~--------------gIAmna~~~v~~~~~~~~~~~~ 188 (206)
T d1rkua_ 126 YQLRQKDPKRQSVIAF---KSLYYRVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAVHT 188 (206)
T ss_dssp EECCSSSHHHHHHHHH---HHTTCEEEEEECSSTTHHHHHHSSE--------------EEEESCCHHHHHHCTTSCEECS
T ss_pred ccccchhhHHHHHHHh---cccccceEEecCCccCHHHHHhCCc--------------cEEECCCHHHHHhCCCceeecC
Confidence 3456777888899998 8999999999999999999999996 7888653 36677864 78
Q ss_pred HhHHHHHHHHHHhh
Q 002984 829 ATDVLKLLQGLATA 842 (861)
Q Consensus 829 ~~eV~~~L~~L~~~ 842 (861)
.+++.+.|.+..+.
T Consensus 189 ~~d~~~~~~~~~~~ 202 (206)
T d1rkua_ 189 YEDLKREFLKASSR 202 (206)
T ss_dssp HHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHhhC
Confidence 99999888776543
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.06 E-value=1.1e-10 Score=115.53 Aligned_cols=70 Identities=24% Similarity=0.275 Sum_probs=57.8
Q ss_pred EEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---Ccccceec
Q 002984 750 EVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK---PSKAKYYL 826 (861)
Q Consensus 750 EI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~Aky~l 826 (861)
+....+.+|..++..+++++ +++++++++|||+.||++|++.||. +|+|+.. +..|+|++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~iGDs~nDi~m~~~ag~--------------~va~na~~~lk~~Ad~vi 197 (210)
T d1j97a_ 135 GEVLKENAKGEILEKIAKIE---GINLEDTVAVGDGANDISMFKKAGL--------------KIAFCAKPILKEKADICI 197 (210)
T ss_dssp CSSCSTTHHHHHHHHHHHHH---TCCGGGEEEEESSGGGHHHHHHCSE--------------EEEESCCHHHHTTCSEEE
T ss_pred ccccccccccchhhhHHHHh---cccccceEEecCCcChHHHHHHCCC--------------CEEECCCHHHHHhCCEEE
Confidence 44566778999999999999 9999999999999999999999997 5666332 37899999
Q ss_pred C--CHhHHHHHH
Q 002984 827 D--DATDVLKLL 836 (861)
Q Consensus 827 ~--d~~eV~~~L 836 (861)
+ |.++|+++|
T Consensus 198 ~~~d~~~vl~~l 209 (210)
T d1j97a_ 198 EKRDLREILKYI 209 (210)
T ss_dssp CSSCGGGGGGGC
T ss_pred cCCCHHHHHHHh
Confidence 7 456887765
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.98 E-value=7.4e-10 Score=107.76 Aligned_cols=75 Identities=13% Similarity=0.152 Sum_probs=61.8
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecCCH
Q 002984 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLDDA 829 (861)
Q Consensus 754 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~d~ 829 (861)
...+|..+++++++++ ++++++|++|||+.||++||+.+|. +++++++ +..|+|++...
T Consensus 77 ~~~~K~~~l~~~~~~~---~i~~~~v~~vGDd~nDl~~l~~~g~--------------siap~nA~~~vk~~A~~Vt~~~ 139 (177)
T d1k1ea_ 77 GKLEKETACFDLMKQA---GVTAEQTAYIGDDSVDLPAFAACGT--------------SFAVADAPIYVKNAVDHVLSTH 139 (177)
T ss_dssp SCSCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHTTSSEECSSC
T ss_pred ccccHHHHHHHHHHHh---cCCcceeEEecCCccHHHHHhhCCe--------------EEEcCCccHHHHHhCCEEeCCC
Confidence 3456999999999999 9999999999999999999999995 7888887 47888998643
Q ss_pred ---hHHHHHHHHHHhhcCC
Q 002984 830 ---TDVLKLLQGLATASSS 845 (861)
Q Consensus 830 ---~eV~~~L~~L~~~~~~ 845 (861)
.-|.++.+.+......
T Consensus 140 GG~GavrE~~e~il~~~~~ 158 (177)
T d1k1ea_ 140 GGKGAFREMSDMILQAQGK 158 (177)
T ss_dssp TTTTHHHHHHHHHHHHTTC
T ss_pred CCCchHHHHHHHHHHHCCC
Confidence 3477777777765443
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=98.89 E-value=2.4e-09 Score=110.51 Aligned_cols=67 Identities=18% Similarity=0.289 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCC-cchHHHHHHccccCCCCCCCCCCceEEEEeCCC--------CcccceecC
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDD-RSDEDMFESILSTVSGPSLPVPPEIFACTVGRK--------PSKAKYYLD 827 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------~s~Aky~l~ 827 (861)
.+......+++++ |++++++++|||+ .+|+.|.+.+|.. .+.|..|.. ...++|+++
T Consensus 186 P~p~~~~~a~~~l---~~~~~~~lmVGD~~~~DI~ga~~aG~~-----------si~V~~G~~~~~~~~~~~~~PD~ii~ 251 (261)
T d1vjra_ 186 PNPLVVDVISEKF---GVPKERMAMVGDRLYTDVKLGKNAGIV-----------SILVLTGETTPEDLERAETKPDFVFK 251 (261)
T ss_dssp TSTHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHHTCE-----------EEEESSSSCCHHHHHHCSSCCSEEES
T ss_pred CcHHHHHHHHhhh---ccCchhcceecCChhHHHHHHHHCCCc-----------EEEECCCCCCHHHHhhcCCCCCEEEC
Confidence 3567889999999 9999999999999 5799999999973 233444532 234689999
Q ss_pred CHhHHHHHHH
Q 002984 828 DATDVLKLLQ 837 (861)
Q Consensus 828 d~~eV~~~L~ 837 (861)
+..|+.++|+
T Consensus 252 ~l~eL~~~l~ 261 (261)
T d1vjra_ 252 NLGELAKAVQ 261 (261)
T ss_dssp SHHHHHHHHC
T ss_pred CHHHHHHHhC
Confidence 9999998874
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.82 E-value=1.9e-09 Score=110.92 Aligned_cols=60 Identities=22% Similarity=0.333 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCCC--------CcccceecCC
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGRK--------PSKAKYYLDD 828 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------~s~Aky~l~d 828 (861)
+....+++++++ |++++++++|||+. +|+.|.+.+|.. .+.|..|.. +..++|++++
T Consensus 182 ~~~~~~~~~~~~---gi~~~~~l~IGD~~~~DI~~a~~aG~~-----------si~V~~G~~~~~~~~~~~~~Pd~vi~s 247 (253)
T d1yv9a1 182 KAIIMERAIAHL---GVEKEQVIMVGDNYETDIQSGIQNGID-----------SLLVTSGFTPKSAVPTLPTPPTYVVDS 247 (253)
T ss_dssp SHHHHHHHHHHH---CSCGGGEEEEESCTTTHHHHHHHHTCE-----------EEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred chhHHHHHHHHh---CCCccceEEecCChHHHHHHHHHCCCC-----------EEEECCCCCCHHHHHhcCCCCCEEECC
Confidence 455678999999 99999999999995 699999999973 234433532 2346799998
Q ss_pred HhH
Q 002984 829 ATD 831 (861)
Q Consensus 829 ~~e 831 (861)
.+|
T Consensus 248 l~e 250 (253)
T d1yv9a1 248 LDE 250 (253)
T ss_dssp GGG
T ss_pred HHH
Confidence 775
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=98.80 E-value=7e-09 Score=106.45 Aligned_cols=54 Identities=15% Similarity=0.257 Sum_probs=44.2
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEC---CCChhhHHHHhcc
Q 002984 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAP 648 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~T---GR~~~~l~~~~~~ 648 (861)
++|+|+||+||||++ ..+.+ +.+.++|+.| ++.|..|+++| +|++..+.+.+..
T Consensus 2 ~ik~VifDlDGTL~~---~~~~i-~~a~e~i~~l-~~~g~~~~~~TN~~~~~~~~~~~~l~~ 58 (250)
T d2c4na1 2 TIKNVICDIDGVLMH---DNVAV-PGAAEFLHGI-MDKGLPLVLLTNYPSQTGQDLANRFAT 58 (250)
T ss_dssp CCCEEEEECBTTTEE---TTEEC-TTHHHHHHHH-HHTTCCEEEEESCCSCCHHHHHHHHHH
T ss_pred CCCEEEEECCCeeEE---CCCcC-ccHHHHHHHH-HHCCCcEEEEeCCCCCCHHHHHHHHhh
Confidence 589999999999998 55555 4678899998 78999999987 6777777776643
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.76 E-value=1.9e-09 Score=108.34 Aligned_cols=71 Identities=11% Similarity=0.173 Sum_probs=54.7
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC-----Cccc-ceecCCH
Q 002984 756 VSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK-----PSKA-KYYLDDA 829 (861)
Q Consensus 756 vsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A-ky~l~d~ 829 (861)
.+|+.++..+++.+ +.+++++++|||+.||++|++.|+. +++++.. .... ....+|.
T Consensus 144 ~~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Dl~~a~~A~~--------------~~a~~~~~~~~~~~~~~~~~~~d~ 206 (226)
T d2feaa1 144 NQCGCCKPSVIHEL---SEPNQYIIMIGDSVTDVEAAKLSDL--------------CFARDYLLNECREQNLNHLPYQDF 206 (226)
T ss_dssp SCCSSCHHHHHHHH---CCTTCEEEEEECCGGGHHHHHTCSE--------------EEECHHHHHHHHHTTCCEECCSSH
T ss_pred cCCHHHHHHHHHHh---cCCCceEEEEeCchhhHHHHHHCCE--------------EEEecchHHHHHHcCCCeeecCCH
Confidence 34777778888888 9999999999999999999999986 4556542 1222 2346889
Q ss_pred hHHHHHHHHHHhhc
Q 002984 830 TDVLKLLQGLATAS 843 (861)
Q Consensus 830 ~eV~~~L~~L~~~~ 843 (861)
.+++..|+.+....
T Consensus 207 ~~i~~~l~~~~~~~ 220 (226)
T d2feaa1 207 YEIRKEIENVKEVQ 220 (226)
T ss_dssp HHHHHHHHTSHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998877643
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.56 E-value=8.9e-08 Score=94.55 Aligned_cols=71 Identities=21% Similarity=0.214 Sum_probs=59.6
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------Ccccceec
Q 002984 753 PQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAKYYL 826 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Aky~l 826 (861)
+.+-.|...+..+++.+ |++++++++|||+.+|+.+.+.+|. .+++|..|.. ...|+|++
T Consensus 134 ~~~~~~p~~~~~~~~~~---~~~~~~~v~VGDs~~Di~aa~~aGi-----------~~i~v~~g~~~~~~l~~~~pd~vi 199 (210)
T d2ah5a1 134 PEAPHKADVIHQALQTH---QLAPEQAIIIGDTKFDMLGARETGI-----------QKLAITWGFGEQADLLNYQPDYIA 199 (210)
T ss_dssp SSCCSHHHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTC-----------EEEEESSSSSCHHHHHTTCCSEEE
T ss_pred ccccccccccchhhhhh---hcccccceeecCCHHHHHHHHHcCC-----------eEEEEcCCCCCHHHHHhCCCCEEE
Confidence 34567899999999999 9999999999999999999999997 3466766653 25688999
Q ss_pred CCHhHHHHHHH
Q 002984 827 DDATDVLKLLQ 837 (861)
Q Consensus 827 ~d~~eV~~~L~ 837 (861)
++..|++++||
T Consensus 200 ~~l~el~~~le 210 (210)
T d2ah5a1 200 HKPLEVLAYFQ 210 (210)
T ss_dssp SSTTHHHHHTC
T ss_pred CCHHHHHHHhC
Confidence 99999988764
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.51 E-value=8.4e-08 Score=96.09 Aligned_cols=59 Identities=19% Similarity=0.285 Sum_probs=47.1
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC------cccceecCC
Q 002984 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP------SKAKYYLDD 828 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------s~Aky~l~d 828 (861)
+..|+..++.+.+.. ++++++++|||.||++|++.+|. +|++|..+ ..|+|++.+
T Consensus 151 ~~~K~~~v~~~~~~~-----~~~~~~~vGDs~~Di~~~~~ag~--------------~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 151 SGGKGKVIKLLKEKF-----HFKKIIMIGDGATDMEACPPADA--------------FIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp TTHHHHHHHHHHHHH-----CCSCEEEEESSHHHHTTTTTSSE--------------EEEECSSCCCHHHHHHCSEEESC
T ss_pred cchHHHHHHHHHhcc-----CccccEEEEeCHhhHHHHHhCCc--------------eEEECCCHHHHHHHHhCCCEeCC
Confidence 345999999887755 57899999999999999999996 57777532 358899888
Q ss_pred HhHH
Q 002984 829 ATDV 832 (861)
Q Consensus 829 ~~eV 832 (861)
..|+
T Consensus 212 f~el 215 (217)
T d1nnla_ 212 FVEL 215 (217)
T ss_dssp GGGG
T ss_pred HHHh
Confidence 7765
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=98.44 E-value=9.1e-08 Score=95.09 Aligned_cols=68 Identities=25% Similarity=0.288 Sum_probs=54.6
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------CcccceecCCH
Q 002984 756 VSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAKYYLDDA 829 (861)
Q Consensus 756 vsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Aky~l~d~ 829 (861)
..|......+++++ +++++++++|||+.+|+.+.+.+|.. ++.|+.|.. ...|.|++++.
T Consensus 151 kp~p~~~~~~~~~~---~~~~~~~~~igD~~~Di~~A~~aG~~-----------~i~v~~g~~~~~~l~~~~~d~~v~~l 216 (224)
T d2hsza1 151 KPHPAPFYYLCGKF---GLYPKQILFVGDSQNDIFAAHSAGCA-----------VVGLTYGYNYNIPIAQSKPDWIFDDF 216 (224)
T ss_dssp TTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSCSTTCCGGGGCCSEEESSG
T ss_pred cccchhhHHHHHHh---hhhhhccchhcCcHHHHHHHHHcCCe-----------EEEEeCCCCCcchhhhcCCCEEECCH
Confidence 34667888899998 99999999999999999999999973 355655532 24678999999
Q ss_pred hHHHHHHH
Q 002984 830 TDVLKLLQ 837 (861)
Q Consensus 830 ~eV~~~L~ 837 (861)
.+++++||
T Consensus 217 ~dL~~iie 224 (224)
T d2hsza1 217 ADILKITQ 224 (224)
T ss_dssp GGGGGGTC
T ss_pred HHHHHhhC
Confidence 99887763
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=98.39 E-value=1.3e-07 Score=93.38 Aligned_cols=64 Identities=22% Similarity=0.279 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccceecCCHhHHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDDATDVL 833 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d~~eV~ 833 (861)
+...++.+++++ |++++++++|||+.+|+.+-+.+|.. ++.|.+|..+ ..+.|.+++..|++
T Consensus 139 ~p~~~~~~~~~~---~~~~~~~l~VgDs~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~i~~l~dll 204 (207)
T d2hdoa1 139 DPLPLLTALEKV---NVAPQNALFIGDSVSDEQTAQAANVD-----------FGLAVWGMDPNADHQKVAHRFQKPLDIL 204 (207)
T ss_dssp SSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEEGGGCCTTGGGSCCSEEESSGGGGG
T ss_pred hhhhhcccccce---eeeccceeEecCCHHHHHHHHHcCCe-----------EEEEecCCCChhHhhhcCcEeCCHHHHH
Confidence 678899999999 99999999999999999999999973 3556666532 56788888888876
Q ss_pred HH
Q 002984 834 KL 835 (861)
Q Consensus 834 ~~ 835 (861)
++
T Consensus 205 ~l 206 (207)
T d2hdoa1 205 EL 206 (207)
T ss_dssp GG
T ss_pred hh
Confidence 53
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=98.37 E-value=5.7e-07 Score=91.92 Aligned_cols=51 Identities=22% Similarity=0.281 Sum_probs=40.7
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECC---CChhhHHHHh
Q 002984 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG---RGRSSLSEWL 646 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TG---R~~~~l~~~~ 646 (861)
+|.|+||+||||++ ... +-+...++|+.| ++.|..++++|+ |+...+.+.+
T Consensus 2 yk~vlFDlDGTL~~---~~~-~i~~a~e~l~~l-~~~g~~~~~~TN~s~~~~~~~~~~l 55 (253)
T d1wvia_ 2 YKGYLIDLDGTIYK---GKD-RIPAGEDFVKRL-QERQLPYILVTNNTTRTPEMVQEML 55 (253)
T ss_dssp CCEEEEECBTTTEE---TTE-ECHHHHHHHHHH-HHHTCCEEEEECCCSSCHHHHHHHH
T ss_pred cCEEEEcCcCceEE---CCC-cCccHHHHHHHH-HHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 58999999999998 444 347889999998 789999999985 5556666655
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=98.35 E-value=1.3e-07 Score=92.08 Aligned_cols=68 Identities=12% Similarity=0.045 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC-----CcccceecCCHhHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK-----PSKAKYYLDDATDV 832 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~Aky~l~d~~eV 832 (861)
+...+..+++++ +++++++++|||+.+|+.+.+++|.. .++.|..|.. ...|+|++++..|+
T Consensus 110 ~p~m~~~~~~~~---~i~~~~s~mVGDs~~Di~aA~~Ag~~----------~~~lv~~g~~~~~~~~~~ad~v~~~l~dl 176 (182)
T d2gmwa1 110 HPGMLLSARDYL---HIDMAASYMVGDKLEDMQAAVAANVG----------TKVLVRTGKPITPEAENAADWVLNSLADL 176 (182)
T ss_dssp SCHHHHHHHHHH---TBCGGGCEEEESSHHHHHHHHHTTCS----------EEEEESSSSCCCHHHHHHCSEEESCGGGH
T ss_pred ccccccchhhhc---ccccccccccCCCHHHHHHHHHhCCC----------cEEEECCCCCCCcccccCCCEEECCHHHH
Confidence 445788888988 99999999999999999999999863 2345555643 24599999999999
Q ss_pred HHHHHH
Q 002984 833 LKLLQG 838 (861)
Q Consensus 833 ~~~L~~ 838 (861)
.++|++
T Consensus 177 ~~~ikk 182 (182)
T d2gmwa1 177 PQAIKK 182 (182)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 998863
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=98.33 E-value=4.9e-07 Score=84.25 Aligned_cols=52 Identities=23% Similarity=0.335 Sum_probs=42.3
Q ss_pred HhccceEEEecCCccccCCCCC---------CCCCCHHHHHHHHHhhcCCCCeEEEECCCCh
Q 002984 587 RKTERRAIFLDYDGTVVPETSI---------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGR 639 (861)
Q Consensus 587 ~~s~~klI~~DlDGTLl~~~~~---------~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~ 639 (861)
..++.|.|+||+||||++.... ...+-+.+++.|+.| ++.|..|+++|||+.
T Consensus 3 ~~~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l-~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 3 TPGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMY-ALMGYQIVVVSGRES 63 (149)
T ss_dssp CTTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHH-HHTTCEEEEEECSCC
T ss_pred CCCCCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHH-HhccCeEEEEecCcH
Confidence 3567899999999999873221 235678999999999 789999999999973
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.30 E-value=3.9e-07 Score=91.17 Aligned_cols=68 Identities=15% Similarity=0.204 Sum_probs=52.9
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------CcccceecCCHhHHHH
Q 002984 761 VAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAKYYLDDATDVLK 834 (861)
Q Consensus 761 al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Aky~l~d~~eV~~ 834 (861)
++..+.. +...+++++++++|||+.+|+.+.+.+|.. +++|++|.. +..|+|++++..++.+
T Consensus 154 ~~~~~~~-~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~ 221 (228)
T d2hcfa1 154 ALERARR-MTGANYSPSQIVIIGDTEHDIRCARELDAR-----------SIAVATGNFTMEELARHKPGTLFKNFAETDE 221 (228)
T ss_dssp HHHHHHH-HHCCCCCGGGEEEEESSHHHHHHHHTTTCE-----------EEEECCSSSCHHHHHTTCCSEEESCSCCHHH
T ss_pred HHHHhhh-hcccCCChhHheeecCChHHHHHHHHcCCE-----------EEEEcCCCCCHHHHhhCCCCEEECCHHHHHH
Confidence 3444433 333368899999999999999999999973 456777763 3578999999999999
Q ss_pred HHHHHH
Q 002984 835 LLQGLA 840 (861)
Q Consensus 835 ~L~~L~ 840 (861)
+|+.|.
T Consensus 222 ~l~~l~ 227 (228)
T d2hcfa1 222 VLASIL 227 (228)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999875
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=98.22 E-value=1.3e-06 Score=86.58 Aligned_cols=70 Identities=16% Similarity=0.071 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCcccce---ecCCHhHHHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKY---YLDDATDVLK 834 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~Aky---~l~d~~eV~~ 834 (861)
+...+..+++++ +++++++++|||+.+|+.+.+.||.. .+.+..|.......+ .+.+..++.+
T Consensus 131 ~p~ml~~a~~~~---~i~~~~~~~VGD~~~Di~aA~~AGi~-----------~i~v~~g~~~~~~~~~~~~~~~~~e~~d 196 (209)
T d2o2xa1 131 NPGMLVEAGKRL---ALDLQRSLIVGDKLADMQAGKRAGLA-----------QGWLVDGEAAVQPGFAIRPLRDSSELGD 196 (209)
T ss_dssp SCHHHHHHHHHH---TCCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEETCCCEEETTEEEEEESSHHHHHH
T ss_pred cchhhhHhHHHh---CCCccceEEeCCCHHHHHHHHHCCCc-----------EEEEeCCCCcccCCccccCccchhHHHH
Confidence 345778888888 99999999999999999999999973 234555654333333 3456666766
Q ss_pred HHHHHHh
Q 002984 835 LLQGLAT 841 (861)
Q Consensus 835 ~L~~L~~ 841 (861)
+|+.+-.
T Consensus 197 ll~~v~~ 203 (209)
T d2o2xa1 197 LLAAIET 203 (209)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665543
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.21 E-value=4.6e-06 Score=79.13 Aligned_cols=62 Identities=15% Similarity=0.109 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCcccceecCCHhHHHHHHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQ 837 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~Aky~l~d~~eV~~~L~ 837 (861)
|...+..+++.+ |++++++++|||+..|+...+.+|.. +|.|... . +.+++.+-|+
T Consensus 100 ~~~~~~~~~~~~---~~~~~~~l~igD~~~di~aA~~aG~~-------------~i~v~~G-------~-~~~~~~~~l~ 155 (164)
T d1u7pa_ 100 KVTHFERLHHKT---GVPFSQMVFFDDENRNIIDVGRLGVT-------------CIHIRDG-------M-SLQTLTQGLE 155 (164)
T ss_dssp HHHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHTTTCE-------------EEECSSC-------C-CHHHHHHHHH
T ss_pred ChHHHHHHHHHh---CCChHHEEEEcCCHHHHHHHHHcCCE-------------EEEECCC-------C-ChHHHHHHHH
Confidence 777888899999 99999999999999999999999873 4544321 1 3555666666
Q ss_pred HHHhhc
Q 002984 838 GLATAS 843 (861)
Q Consensus 838 ~L~~~~ 843 (861)
.+++..
T Consensus 156 ~f~~~~ 161 (164)
T d1u7pa_ 156 TFAKAQ 161 (164)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 666554
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.13 E-value=1.6e-07 Score=92.32 Aligned_cols=65 Identities=11% Similarity=0.111 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCcccceecCCHhHHHHHH
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLL 836 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~Aky~l~d~~eV~~~L 836 (861)
.|...++.+++++ |+++++|++|||+.+|+.+.+.+|.. +|.+......+.+.+++..++.++|
T Consensus 138 p~~~~~~~~~~~~---~~~p~~~l~VgD~~~Di~~A~~~G~~-------------~i~v~~~~~~~~~~~~~~~dl~~l~ 201 (204)
T d2go7a1 138 PSPEAATYLLDKY---QLNSDNTYYIGDRTLDVEFAQNSGIQ-------------SINFLESTYEGNHRIQALADISRIF 201 (204)
T ss_dssp TSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEESSCCSCTTEEECSSTTHHHHHT
T ss_pred hhHHHHHHHHHHh---CCCCceEEEEeCCHHHHHHHHHcCCe-------------EEEEcCCCCCcCeecCCHHHHHHHh
Confidence 3788999999999 99999999999999999999999973 6667666678889999888887765
Q ss_pred H
Q 002984 837 Q 837 (861)
Q Consensus 837 ~ 837 (861)
+
T Consensus 202 ~ 202 (204)
T d2go7a1 202 E 202 (204)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=98.11 E-value=1.5e-07 Score=93.36 Aligned_cols=59 Identities=14% Similarity=0.039 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC--C-----CcccceecCCHh
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR--K-----PSKAKYYLDDAT 830 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~-----~s~Aky~l~d~~ 830 (861)
+....+.+++++ |++++++++|||+.+|+.+.+.+|.. +|.|.. . ...|++.+++..
T Consensus 146 ~~~~~~~~~~~l---~~~~~~~l~igD~~~di~aA~~~G~~-------------~i~v~~~~~~~~~~~~~a~~~i~~l~ 209 (218)
T d1te2a_ 146 HPQVYLDCAAKL---GVDPLTCVALEDSVNGMIASKAARMR-------------SIVVPAPEAQNDPRFVLANVKLSSLT 209 (218)
T ss_dssp STHHHHHHHHHH---TSCGGGEEEEESSHHHHHHHHHTTCE-------------EEECCCTTTTTCGGGGGSSEECSCGG
T ss_pred hHHHHHHHHHHc---CCCchhcEEEeeCHHHHHHHHHcCCE-------------EEEECCCCCccchhhcCCCEEECChh
Confidence 457899999999 99999999999999999999999973 444432 1 257888889887
Q ss_pred HH
Q 002984 831 DV 832 (861)
Q Consensus 831 eV 832 (861)
|+
T Consensus 210 el 211 (218)
T d1te2a_ 210 EL 211 (218)
T ss_dssp GC
T ss_pred hC
Confidence 75
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=98.07 E-value=5.1e-06 Score=84.37 Aligned_cols=67 Identities=13% Similarity=0.170 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhhcCCCC-CCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC------------------
Q 002984 759 GLVAEKVLVRMFNGGRP-PDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP------------------ 819 (861)
Q Consensus 759 g~al~~ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------------------ 819 (861)
......+++++ |+. +++|++|||+.+|+.+-+.+|.. +++|+.|..+
T Consensus 159 p~~~~~~~~~l---~~~p~~~~v~VgDs~~Di~aA~~aG~~-----------ti~v~~G~~~~~~~~~~~~~~~~~~~~~ 224 (257)
T d1swva_ 159 PWMCYKNAMEL---GVYPMNHMIKVGDTVSDMKEGRNAGMW-----------TVGVILGSSELGLTEEEVENMDSVELRE 224 (257)
T ss_dssp SHHHHHHHHHH---TCCSGGGEEEEESSHHHHHHHHHTTSE-----------EEEECTTCTTTCCCHHHHHHSCHHHHHH
T ss_pred hHHHHHHHHHh---CCCCcceEEEEeCChhhHHHHHHCCCE-----------EEEEccCCCCCCCCHHHHhhCCHHHHHH
Confidence 45788889999 885 59999999999999999999973 4677777421
Q ss_pred -----------cccceecCCHhHHHHHHHHH
Q 002984 820 -----------SKAKYYLDDATDVLKLLQGL 839 (861)
Q Consensus 820 -----------s~Aky~l~d~~eV~~~L~~L 839 (861)
..|+|++++..|+..+|+.+
T Consensus 225 ~~~~~~~~l~~~gad~vi~~l~eL~~ii~~~ 255 (257)
T d1swva_ 225 KIEVVRNRFVENGAHFTIETMQELESVMEHI 255 (257)
T ss_dssp HHHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEECCHHHHHHHHHHH
Confidence 23899999999999988875
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.89 E-value=4.3e-06 Score=84.18 Aligned_cols=73 Identities=15% Similarity=0.073 Sum_probs=56.8
Q ss_pred CCCH--HHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCC------CCccccee
Q 002984 755 GVSK--GLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGR------KPSKAKYY 825 (861)
Q Consensus 755 gvsK--g~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~------~~s~Aky~ 825 (861)
+..| ....+.+++++ |++++++++|||+. +|+.+.+.+|.. ++.+..+. ....++|+
T Consensus 161 ~~~KP~p~~~~~~~~~~---~~~~~~~l~iGD~~~~Di~~A~~~G~~-----------~~~~~~~~~~~~~~~~~~p~~~ 226 (247)
T d2gfha1 161 KEEKPAPSIFYHCCDLL---GVQPGDCVMVGDTLETDIQGGLNAGLK-----------ATVWINKSGRVPLTSSPMPHYM 226 (247)
T ss_dssp SSCTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCS-----------EEEEECTTCCCCSSCCCCCSEE
T ss_pred ccchhhhhhHHHHHHHh---hcCHHhcceeccChHhHHHHHHHcCCe-----------EEEEECCCCCCcccccCCCCEE
Confidence 4445 68899999999 99999999999995 899999999973 11222222 13568899
Q ss_pred cCCHhHHHHHHHHHHh
Q 002984 826 LDDATDVLKLLQGLAT 841 (861)
Q Consensus 826 l~d~~eV~~~L~~L~~ 841 (861)
+++..++.++|+.+-.
T Consensus 227 i~~l~eL~~ll~~i~~ 242 (247)
T d2gfha1 227 VSSVLELPALLQSIDC 242 (247)
T ss_dssp ESSGGGHHHHHHHHTT
T ss_pred ECCHHHHHHHHHHHhh
Confidence 9999999999998743
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=97.87 E-value=7.2e-06 Score=77.69 Aligned_cols=47 Identities=23% Similarity=0.437 Sum_probs=36.7
Q ss_pred ceEEEecCCccccCCCCC--------CCCCCHHHHHHHHHhhcCCCCeEEEECCCC
Q 002984 591 RRAIFLDYDGTVVPETSI--------IKSPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~--------~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~ 638 (861)
.|+||||.||||...... .-.+-+.+.++|+.| ++.|+.++++|..+
T Consensus 2 ~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-~~~g~~l~i~TNq~ 56 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKL-QKAGYKLVMITNQD 56 (161)
T ss_dssp CEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHH-HHTTEEEEEEEECT
T ss_pred CcEEEEeCCCCeEeeCCCCCccCCHHHceECccHHHHHHHH-HHcCCceeeecccc
Confidence 589999999999974321 123568899999999 78999999998653
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.87 E-value=1.3e-06 Score=87.32 Aligned_cols=68 Identities=19% Similarity=0.208 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCC-cchHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecCCHhHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDD-RSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLDDATDV 832 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~d~~eV 832 (861)
++...+.+++++ |+++++++.|||+ .+|+.+.+.+|.. ++.+..+.. ...++|++++..++
T Consensus 157 ~~~~~~~~~~~l---~~~p~~~l~vgD~~~~Di~~A~~~G~~-----------~v~v~~~~~~~~~~~~~d~~i~~l~el 222 (230)
T d1x42a1 157 HPRIFELALKKA---GVKGEEAVYVGDNPVKDCGGSKNLGMT-----------SILLDRKGEKREFWDKCDFIVSDLREV 222 (230)
T ss_dssp SHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHTTTCE-----------EEEECTTSCCGGGGGGSSEEESSTTHH
T ss_pred hhHHHHHHHhhh---cccccccceeecCcHhHHHHHHHcCCE-----------EEEECCCCCCcccccCCCEEECCHHHH
Confidence 468899999999 9999999999998 5899999999873 223322222 35788999999999
Q ss_pred HHHHHHH
Q 002984 833 LKLLQGL 839 (861)
Q Consensus 833 ~~~L~~L 839 (861)
.++|++|
T Consensus 223 ~~~l~~l 229 (230)
T d1x42a1 223 IKIVDEL 229 (230)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 9999875
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=97.69 E-value=6.3e-06 Score=81.42 Aligned_cols=37 Identities=8% Similarity=0.022 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+....+.+++++ |+++++|++|||+.+|+.+.+.+|.
T Consensus 147 ~~~~~~~~l~~~---~i~~~~~l~VgD~~~di~~A~~aG~ 183 (221)
T d1o08a_ 147 APDIFIAAAHAV---GVAPSESIGLEDSQAGIQAIKDSGA 183 (221)
T ss_dssp STHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTC
T ss_pred ChHHHHHHHHHc---CCCCceEEEEecCHHHHHHHHHcCC
Confidence 467899999999 9999999999999999999999997
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.68 E-value=0.00011 Score=66.90 Aligned_cols=56 Identities=14% Similarity=0.108 Sum_probs=46.7
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002984 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
...+++|-+||++.. ...++-+.+.++++.| ++.|+.++++||-.......+.+.+
T Consensus 3 ~~~~~~d~~~~~~~g--~~D~lr~~a~~~I~~L-~~~Gi~v~ilTGD~~~~a~~ia~~l 58 (135)
T d2b8ea1 3 VTAVIFDKTGTLTKG--KPDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISREL 58 (135)
T ss_dssp CCEEEEECCCCCBCS--CCCCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred EEEEEECCceEEEEe--cCCCCCccHHHHHHHH-HHcCCEEEEEcCcchhhhhHHHhhh
Confidence 468999999999862 2445778889999998 7899999999999999999887543
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=97.66 E-value=3.5e-05 Score=76.86 Aligned_cols=66 Identities=18% Similarity=0.182 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC---------------------
Q 002984 759 GLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR--------------------- 817 (861)
Q Consensus 759 g~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--------------------- 817 (861)
....+++++++ |++|++|++|||+.+|+..-+.+|.. +|-|-.
T Consensus 150 p~~f~~a~~~l---g~~p~e~l~VgD~~~di~~A~~aG~~-------------tv~v~r~~~~~~~~~~~~~~~~~~~~~ 213 (245)
T d1qq5a_ 150 PDSYALVEEVL---GVTPAEVLFVSSNGFDVGGAKNFGFS-------------VARVARLSQEALARELVSGTIAPLTMF 213 (245)
T ss_dssp HHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHHHTCE-------------EEEECCSCHHHHHHHTTSSSCCHHHHH
T ss_pred HHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHcCCe-------------EEEEcCCCcccccccccccccccchhh
Confidence 46789999999 99999999999999999999999973 444421
Q ss_pred ---------CCcccceecCCHhHHHHHHHHHH
Q 002984 818 ---------KPSKAKYYLDDATDVLKLLQGLA 840 (861)
Q Consensus 818 ---------~~s~Aky~l~d~~eV~~~L~~L~ 840 (861)
....++|++++..|+.++|+.|+
T Consensus 214 ~~~~~~~~~~~~~pd~~i~~l~el~~lv~~~~ 245 (245)
T d1qq5a_ 214 KALRMREETYAEAPDFVVPALGDLPRLVRGMA 245 (245)
T ss_dssp HHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC
T ss_pred hhhhhhhhhccCCCCEEECCHHHHHHHHHhhC
Confidence 12468899999999999999874
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.61 E-value=5.2e-05 Score=75.27 Aligned_cols=38 Identities=11% Similarity=0.087 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
+..+.+.+++++ |++++++++|||+.+|+...+.+|..
T Consensus 186 ~p~~~~~~~~~~---~~~p~~~l~vgD~~~dv~aA~~aG~~ 223 (253)
T d1zs9a1 186 ESESYRKIADSI---GCSTNNILFLTDVTREASAAEEADVH 223 (253)
T ss_dssp CHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHTTCE
T ss_pred CcHHHHHHHHHh---CCCcCcEEEEeCCHHHHHHHHHcCCE
Confidence 677888999999 99999999999999999999999973
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=97.25 E-value=0.00023 Score=76.67 Aligned_cols=58 Identities=22% Similarity=0.218 Sum_probs=49.0
Q ss_pred CCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC---------cccceecCCHhHHHHHHHHHHh
Q 002984 773 GRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP---------SKAKYYLDDATDVLKLLQGLAT 841 (861)
Q Consensus 773 gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~---------s~Aky~l~d~~eV~~~L~~L~~ 841 (861)
+..++.|+++||+.||++|.+.+|. .+++|++|... ..|+|+++++.++.++|..|..
T Consensus 312 ~~~~~~~~~vGD~~~D~~aak~Ag~-----------~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~~l~~ 378 (380)
T d1qyia_ 312 IVNKDDVFIVGDSLADLLSAQKIGA-----------TFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLE 378 (380)
T ss_dssp CSCTTTEEEEESSHHHHHHHHHHTC-----------EEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTTT
T ss_pred CCCCCeEEEECCCHHHHHHHHHCCC-----------CEEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHHHHHHh
Confidence 7889999999999999999999986 24688888643 2699999999999999876643
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.25 E-value=0.00015 Score=64.78 Aligned_cols=46 Identities=22% Similarity=0.361 Sum_probs=39.1
Q ss_pred eEEEecCCccccCCCC---CCCCCCHHHHHHHHHhhcCCCCeEEEECCCC
Q 002984 592 RAIFLDYDGTVVPETS---IIKSPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (861)
Q Consensus 592 klI~~DlDGTLl~~~~---~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~ 638 (861)
|.|+||+||||....+ ....|-+.+++.|+.| .+.|++++|.|+|.
T Consensus 2 K~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l-~~~G~~Iii~TaR~ 50 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREY-HQLGFEIVISTARN 50 (124)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHH-HHTTCEEEEEECTT
T ss_pred CEEEEeCCCCeECCCCCCcCccCcCHHHHHHHHHH-HHCCCEEEEEecCC
Confidence 5689999999987432 2346889999999999 79999999999996
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.24 E-value=0.00046 Score=65.25 Aligned_cols=158 Identities=15% Similarity=0.245 Sum_probs=98.8
Q ss_pred EEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEe
Q 002984 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWET 672 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~ 672 (861)
++++|-+|||+-.. -.++-+.+.++++.| ++.|+.++++||=+......+.+. +|+...|- ..+.
T Consensus 4 ~~~~d~~~~~~~~~--~Dp~R~~~~~~I~~l-~~~GI~v~miTGD~~~tA~~ia~~---~Gi~~~~~--------~v~~- 68 (168)
T d1wpga2 4 VICSDKTGTLTTNQ--LDPPRKEVMGSIQLC-RDAGIRVIMITGDNKGTAIAICRR---IGIFGENE--------EVAD- 68 (168)
T ss_dssp EEEECCTTTTBCCC--ECCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHH---TTSSCTTC--------CCTT-
T ss_pred EEEECCccEEEEEe--cCCCchhHHHHHHHH-HHCcCEEEEECCCCHHHHHHHHHH---cCCCCCcc--------cccc-
Confidence 68889999998721 134568889999998 889999999999999999998854 44433221 0000
Q ss_pred cCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEe
Q 002984 673 NHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVK 752 (861)
Q Consensus 673 ~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~ 752 (861)
....+.+.-. ....+..+.+. .. .-+-++.
T Consensus 69 ----~~~~~~~~~~-----------------------------------~~~~~~~~~~~----~~-------~v~ar~~ 98 (168)
T d1wpga2 69 ----RAYTGREFDD-----------------------------------LPLAEQREACR----RA-------CCFARVE 98 (168)
T ss_dssp ----TEEEHHHHHH-----------------------------------SCHHHHHHHHH----HC-------CEEESCC
T ss_pred ----ccccccccch-----------------------------------hhHHHHhhhhh----hh-------hhhhccc
Confidence 0000111000 00111111111 11 1133455
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Ccccceec--
Q 002984 753 PQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYL-- 826 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l-- 826 (861)
|. .|...++.+-+. | ..|.++||+.||.++|+.++. ++++|+. +..|++++
T Consensus 99 p~--~K~~lv~~l~~~----g---~~Va~vGDG~nD~~AL~~Adv--------------GIa~~~gt~~a~~aAdivl~~ 155 (168)
T d1wpga2 99 PS--HKSKIVEYLQSY----D---EITAMTGDGVNDAPALKKAEI--------------GIAMGSGTAVAKTASEMVLAD 155 (168)
T ss_dssp HH--HHHHHHHHHHHT----T---CCEEEEECSGGGHHHHHHSSE--------------EEEETTSCHHHHHTCSEEETT
T ss_pred hh--HHHHHHHHHHhc----c---cceeEEecCCCCHHHHHhCCE--------------EEEeccccHHHHHhCCEEEcc
Confidence 54 377776666442 3 469999999999999999985 7788864 34677776
Q ss_pred CCHhHHHHHHHH
Q 002984 827 DDATDVLKLLQG 838 (861)
Q Consensus 827 ~d~~eV~~~L~~ 838 (861)
++...|.+++++
T Consensus 156 ~~l~~v~~~I~~ 167 (168)
T d1wpga2 156 DNFSTIVAAVEE 167 (168)
T ss_dssp CCTHHHHHHHHH
T ss_pred CCHHHHHHHHHc
Confidence 347888887763
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.14 E-value=0.00031 Score=68.53 Aligned_cols=37 Identities=14% Similarity=0.055 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+....+.+++++ |++|+++++|||+.+|+.+-+.+|.
T Consensus 159 ~p~~~~~~~~~~---~v~p~~~l~IgD~~~Di~~A~~aG~ 195 (222)
T d1cr6a1 159 EPQIYNFLLDTL---KAKPNEVVFLDDFGSNLKPARDMGM 195 (222)
T ss_dssp CHHHHHHHHHHH---TSCTTSEEEEESSSTTTHHHHHHTC
T ss_pred ChHHHHHHHHHh---CCCcceEEEEECCHHHHHHHHHcCC
Confidence 478889999999 9999999999999999999999997
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.13 E-value=0.00014 Score=64.97 Aligned_cols=54 Identities=30% Similarity=0.420 Sum_probs=42.3
Q ss_pred EEEecCCccccCCCC-CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhH---HHHhc
Q 002984 593 AIFLDYDGTVVPETS-IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSL---SEWLA 647 (861)
Q Consensus 593 lI~~DlDGTLl~~~~-~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l---~~~~~ 647 (861)
-|++|+||||..... ....|-+.+++.|++| .+.|+.++|.|+|+.... .+|+.
T Consensus 2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L-~~~G~~IIi~TaR~~~~~~~t~~wL~ 59 (122)
T d2obba1 2 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLL-QQEKHRLILWSVREGELLDEAIEWCR 59 (122)
T ss_dssp EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHH-HHTTCEEEECCSCCHHHHHHHHHHHH
T ss_pred EEEEEcCCCcCCCCCCccccccHHHHHHHHHH-HHCCCeEEEEecCCCcchHHHHHHHH
Confidence 379999999987432 2245778999999999 799999999999987543 45654
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.95 E-value=0.00026 Score=67.79 Aligned_cols=34 Identities=9% Similarity=-0.108 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 759 GLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 759 g~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
....+.+++++ ++ +.+++|||+.+|+.+.+.+|.
T Consensus 137 p~~~~~~~~~~---~~--~~~l~vgDs~~Di~aA~~aG~ 170 (187)
T d2fi1a1 137 PESMLYLREKY---QI--SSGLVIGDRPIDIEAGQAAGL 170 (187)
T ss_dssp CHHHHHHHHHT---TC--SSEEEEESSHHHHHHHHHTTC
T ss_pred HHHHHHHHHHc---CC--CCeEEEeCCHHHHHHHHHcCC
Confidence 56788888987 65 569999999999999999986
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.19 E-value=0.0029 Score=61.38 Aligned_cols=69 Identities=17% Similarity=0.169 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC--C--------cccceecC
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK--P--------SKAKYYLD 827 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~--------s~Aky~l~ 827 (861)
+......+++++ |++++++++|||+.+|+.+-+.+|.. +++|+.|.. + ..|.++++
T Consensus 143 ~~~~~~~~~~~l---~~~p~~~l~vgDs~~dv~aA~~aG~~-----------~i~v~~~~~~~~~~~~~l~~~~ad~vi~ 208 (222)
T d2fdra1 143 KPDIFLHGAAQF---GVSPDRVVVVEDSVHGIHGARAAGMR-----------VIGFTGASHTYPSHADRLTDAGAETVIS 208 (222)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEECCSTTCCTTHHHHHHHHTCSEEES
T ss_pred CHHHHHHHHHhh---CCCCceEEEEcCCHHHHHHHHHcCCE-----------EEEEccCCCCCcchHHHHHhCCCCEEEC
Confidence 567899999999 99999999999999999999999973 456666642 1 24889999
Q ss_pred CHhHHHHHHHHHH
Q 002984 828 DATDVLKLLQGLA 840 (861)
Q Consensus 828 d~~eV~~~L~~L~ 840 (861)
+..++..+|+.|+
T Consensus 209 ~l~eL~~ll~~l~ 221 (222)
T d2fdra1 209 RMQDLPAVIAAMA 221 (222)
T ss_dssp CGGGHHHHHHHHT
T ss_pred CHHHHHHHHHHhc
Confidence 9999999999886
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=94.32 E-value=0.02 Score=54.90 Aligned_cols=65 Identities=15% Similarity=0.116 Sum_probs=51.7
Q ss_pred CCCHH--HHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC--C-----CCccccee
Q 002984 755 GVSKG--LVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG--R-----KPSKAKYY 825 (861)
Q Consensus 755 gvsKg--~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG--~-----~~s~Aky~ 825 (861)
+..|. ...+.+++++ |++++++++|||+.+|+...+.+|.. +|-|. . ....|+|.
T Consensus 146 ~~~KP~p~~~~~~~~~~---g~~p~e~l~VgD~~~Di~~A~~aG~~-------------~v~v~r~~~~~~~~~~~~d~~ 209 (220)
T d1zrna_ 146 QVYKPDNRVYELAEQAL---GLDRSAILFVASNAWDATGARYFGFP-------------TCWINRTGNVFEEMGQTPDWE 209 (220)
T ss_dssp TCCTTSHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCC-------------EEEECTTCCCCCSSSCCCSEE
T ss_pred eccccHHHHHHHHHHHh---CCCCceEEEEecChHhHHHHHHcCCE-------------EEEEcCCCCCcccccCCCCEE
Confidence 44554 5899999999 99999999999999999999999973 45442 1 13568899
Q ss_pred cCCHhHHHHH
Q 002984 826 LDDATDVLKL 835 (861)
Q Consensus 826 l~d~~eV~~~ 835 (861)
+++..++.++
T Consensus 210 i~~l~el~~l 219 (220)
T d1zrna_ 210 VTSLRAVVEL 219 (220)
T ss_dssp ESSHHHHHTT
T ss_pred ECCHHHHHhh
Confidence 9998888754
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.73 E-value=0.014 Score=55.82 Aligned_cols=49 Identities=22% Similarity=0.282 Sum_probs=37.1
Q ss_pred hccceEEEecCCccccCCCCCC--------C-CCCHHHHHHHHHhhcCCCCeEEEECCC
Q 002984 588 KTERRAIFLDYDGTVVPETSII--------K-SPGPEVISVLKTLCSDPNNTVFIVSGR 637 (861)
Q Consensus 588 ~s~~klI~~DlDGTLl~~~~~~--------~-~~s~~~~~~L~~L~~~~g~~v~I~TGR 637 (861)
+.+.|+++||.||||+...+.. - -+.+.+.++|+.| .+.|..++|+|..
T Consensus 18 ~~~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L-~~~gy~iiIvTNQ 75 (195)
T d1yj5a1 18 KPQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQEL-AAEGYKLVIFTNQ 75 (195)
T ss_dssp CCCSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHH-HHHTCEEEEEEEC
T ss_pred CCcCcEEEEECCCceEeeCCCCcCCCChhhceeccCCHHHHHHHH-HhCCcEEEEecCc
Confidence 3457899999999998633211 0 1368899999999 6889999999954
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=92.83 E-value=0.025 Score=54.37 Aligned_cols=63 Identities=19% Similarity=0.291 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHhccceEEEecCCccccCCCC-----------C--------------------CCCCCHHHHHHHHHhhc
Q 002984 577 LSIDHIVSAYRKTERRAIFLDYDGTVVPETS-----------I--------------------IKSPGPEVISVLKTLCS 625 (861)
Q Consensus 577 l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~-----------~--------------------~~~~s~~~~~~L~~L~~ 625 (861)
.++..+.+.++..+...|+||+|-|+++..+ . ...+-+.+++.|+.+ +
T Consensus 21 ~~~~~i~~~~~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~-~ 99 (209)
T d2b82a1 21 VSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMH-V 99 (209)
T ss_dssp ECHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHH-H
T ss_pred EEHHHHHHhcCCCCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHH-H
Confidence 5678888998887777999999999998311 0 012345788888888 7
Q ss_pred CCCCeEEEECCCChh
Q 002984 626 DPNNTVFIVSGRGRS 640 (861)
Q Consensus 626 ~~g~~v~I~TGR~~~ 640 (861)
++|+.|+++|||+..
T Consensus 100 ~~Gv~IfyVTnR~~~ 114 (209)
T d2b82a1 100 RRGDAIFFVTGRSPT 114 (209)
T ss_dssp HHTCEEEEEECSCCC
T ss_pred HcCCeEEEEeCCchh
Confidence 899999999999744
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=92.02 E-value=2.4 Score=43.70 Aligned_cols=248 Identities=15% Similarity=0.124 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhh--cCCEEe
Q 002984 182 SANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDLIG 259 (861)
Q Consensus 182 ~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll--~~dlig 259 (861)
.+-..+++ +++..+| |+|.||.=-.-.|+.-+.....++||+.. |---.|.++. -|..+++.|-+. -||+--
T Consensus 75 ~~~~~~~~-~l~~~kP--D~vlv~GDr~e~la~a~aa~~~~ipi~Hi-egG~rsg~~~--~~~~de~~R~~iskls~~hf 148 (373)
T d1v4va_ 75 RILPQAAR-ALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVGHV-EAGLRSGNLK--EPFPEEANRRLTDVLTDLDF 148 (373)
T ss_dssp HHHHHHHH-HHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEEEE-TCCCCCSCTT--SSTTHHHHHHHHHHHCSEEE
T ss_pred HHHHHHhh-hhhhcCc--ccccccccCccchhHHHHHHHhhhhheee-cccccccccc--cCcchhhhhhhhccccceee
Confidence 34444444 4566688 89999998888888777777778888753 2212222222 234455555431 367666
Q ss_pred ecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHH----cCCCe
Q 002984 260 FHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQ----FDGKK 335 (861)
Q Consensus 260 F~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~----~~~~~ 335 (861)
--|..+.++.++ +|.+ ..+ +..-| -+++|- +. ....+.+. ..++.
T Consensus 149 ~~t~~~~~~L~~-----~Ge~--~~~----I~~vG--------~p~~D~--i~----------~~~~~~~~~~~~~~~~~ 197 (373)
T d1v4va_ 149 APTPLAKANLLK-----EGKR--EEG----ILVTG--------QTGVDA--VL----------LAAKLGRLPEGLPEGPY 197 (373)
T ss_dssp ESSHHHHHHHHT-----TTCC--GGG----EEECC--------CHHHHH--HH----------HHHHHCCCCTTCCSSCE
T ss_pred ecchhhhhhhhh-----hccc--ccc----eeecc--------cchhhH--HH----------hhhhhcccccccccccc
Confidence 667777777665 2322 111 11111 113331 11 01111111 14567
Q ss_pred EEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEE
Q 002984 336 LILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLI 415 (861)
Q Consensus 336 vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~ 415 (861)
+++..-|....+.....+.++..+.+..++.. ++... +. . +. .+..+.+ .... ...+. +
T Consensus 198 ~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~----~i~p~-~~--~-~~---~~~~~~~----~~~~-----~~n~~-~ 256 (373)
T d1v4va_ 198 VTVTMHRRENWPLLSDLAQALKRVAEAFPHLT----FVYPV-HL--N-PV---VREAVFP----VLKG-----VRNFV-L 256 (373)
T ss_dssp EEECCCCGGGGGGHHHHHHHHHHHHHHCTTSE----EEEEC-CS--C-HH---HHHHHHH----HHTT-----CTTEE-E
T ss_pred eeEEeccccccchHHHHHHHHHHHhhhcccce----eeeee-cc--c-cc---chhhhhh----hhcc-----cccce-e
Confidence 78889999988899999999999988887754 43332 22 1 11 1111111 1111 12344 5
Q ss_pred cCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCccc-C-CCceE
Q 002984 416 DRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS-L-SGAIR 493 (861)
Q Consensus 416 ~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~-l-~~ai~ 493 (861)
..++++.+...+++.|++++=.| +-...||.+.+. |+|.=...|-.++ + .|...
T Consensus 257 ~~~l~~~~~l~ll~~s~~vignS-----ssgi~Ea~~lg~-------------------P~Inir~~~eRqeg~~~g~nv 312 (373)
T d1v4va_ 257 LDPLEYGSMAALMRASLLLVTDS-----GGLQEEGAALGV-------------------PVVVLRNVTERPEGLKAGILK 312 (373)
T ss_dssp ECCCCHHHHHHHHHTEEEEEESC-----HHHHHHHHHTTC-------------------CEEECSSSCSCHHHHHHTSEE
T ss_pred eccchHHHHHHHhhhceeEeccc-----chhhhcchhhcC-------------------cEEEeCCCccCHHHHhcCeeE
Confidence 55899999999999999988766 234568888743 4555444444433 3 23333
Q ss_pred eCCCCHHHHHHHHHHHhc
Q 002984 494 VNPWDIDAVADAMTLAIN 511 (861)
Q Consensus 494 vnP~d~~~~A~ai~~aL~ 511 (861)
+-+.|.+++..++..+|.
T Consensus 313 lv~~d~~~I~~~i~~~l~ 330 (373)
T d1v4va_ 313 LAGTDPEGVYRVVKGLLE 330 (373)
T ss_dssp ECCSCHHHHHHHHHHHHT
T ss_pred EcCCCHHHHHHHHHHHHc
Confidence 345699999999999997
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=89.85 E-value=0.091 Score=48.27 Aligned_cols=38 Identities=13% Similarity=0.140 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.+....+.+++.+ |+++++|++|||+.+|+...+.+|.
T Consensus 142 p~~~~~~~~~~~~---~~~~~~~l~vgDs~~di~~A~~aG~ 179 (197)
T d2b0ca1 142 PEARIYQHVLQAE---GFSPSDTVFFDDNADNIEGANQLGI 179 (197)
T ss_dssp TCHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred cchHHHHHHHHhc---CCCCCeEEEEeCCHHHHHHHHHcCC
Confidence 3678889999999 9999999999999999999999997
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.12 E-value=0.32 Score=45.58 Aligned_cols=60 Identities=13% Similarity=0.109 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCcccceecCCHhHHHHHHH
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQ 837 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~Aky~l~d~~eV~~~L~ 837 (861)
+....+++++.+ |++++++++|||+..|+.+.+.+|.. +|- +++.....+-|+
T Consensus 161 ~~~~~~~~~~~~---~~~p~e~l~VgD~~~Di~~A~~~G~~-------------ti~-----------v~~~~~~~~~l~ 213 (225)
T d1zd3a1 161 EPQIYKFLLDTL---KASPSEVVFLDDIGANLKPARDLGMV-------------TIL-----------VQDTDTALKELE 213 (225)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHTTCE-------------EEE-----------CSSHHHHHHHHH
T ss_pred HHHHHHHHhhhc---ccCccceeEEecCHHHHHHHHHcCCE-------------EEE-----------ECCcchhHHHHH
Confidence 568899999999 99999999999999999999999972 443 345666777777
Q ss_pred HHHhhcC
Q 002984 838 GLATASS 844 (861)
Q Consensus 838 ~L~~~~~ 844 (861)
++.....
T Consensus 214 ~~~~~~l 220 (225)
T d1zd3a1 214 KVTGIQL 220 (225)
T ss_dssp HHHTSCC
T ss_pred HccCccc
Confidence 7766543
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=88.86 E-value=0.42 Score=48.97 Aligned_cols=101 Identities=11% Similarity=0.045 Sum_probs=62.2
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCC--------
Q 002984 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC-------- 484 (861)
Q Consensus 413 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~-------- 484 (861)
+.+.+.+|+.++ +..||+||..+ |.| +..|+++|+.| +|+.=+.+.
T Consensus 272 v~i~~~~p~~~l---l~~a~~~v~hg---G~~-t~~Eal~~G~P-------------------~v~~P~~~d~~~eQ~~n 325 (391)
T d1pn3a_ 272 CFVVGEVNLQEL---FGRVAAAIHHD---SAG-TTLLAMRAGIP-------------------QIVVRRVVDNVVEQAYH 325 (391)
T ss_dssp CCEESSCCHHHH---HTTSSCEEEES---CHH-HHHHHHHHTCC-------------------EEEECSSCCBTTBCCHH
T ss_pred EEEecccCHHHH---HhhccEEEecC---chH-HHHHHHHhCCc-------------------EEEeccccCCcchHHHH
Confidence 356677887654 67899998654 555 67899999544 565544442
Q ss_pred cccC---CCceEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHH
Q 002984 485 SPSL---SGAIRVNPWD--IDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQ 542 (861)
Q Consensus 485 ~~~l---~~ai~vnP~d--~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~ 542 (861)
+..+ ..|+.+++.+ .++++++|.++|+-+ -+++.+++.+.++.....+=++.+.+
T Consensus 326 A~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~---~r~~a~~~a~~~~~~g~~~aa~~i~~ 385 (391)
T d1pn3a_ 326 ADRVAELGVGVAVDGPVPTIDSLSAALDTALAPE---IRARATTVADTIRADGTTVAAQLLFD 385 (391)
T ss_dssp HHHHHHHTSEEEECCSSCCHHHHHHHHHHHTSTT---HHHHHHHHGGGSCSCHHHHHHHHHHH
T ss_pred HHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCHH---HHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 2223 3467776654 799999999999622 23344555555655444443443333
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=83.84 E-value=0.46 Score=44.56 Aligned_cols=37 Identities=14% Similarity=0.147 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002984 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
...+.+.+++++ |++|++|++|||+.+|+...+.+|.
T Consensus 161 ~p~~f~~~~~~l---g~~p~e~l~VgD~~~Dv~~A~~aG~ 197 (225)
T d2g80a1 161 ETQSYANILRDI---GAKASEVLFLSDNPLELDAAAGVGI 197 (225)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred ChhHhHHHHHhc---ccCchhceeecCCHHHHHHHHHcCC
Confidence 477889999999 9999999999999999999999997
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