BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002985
(861 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O52177|RELA_MYXXA GTP pyrophosphokinase OS=Myxococcus xanthus GN=relA PE=3 SV=1
Length = 757
Score = 351 bits (901), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 208/541 (38%), Positives = 310/541 (57%), Gaps = 90/541 (16%)
Query: 124 EDSPERLWEDLRPTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARIL 182
+DSPER PT+S P+ +L+++++A + + + H GQ R+SGEP+++HP+EVA IL
Sbjct: 19 DDSPERH----PPTVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGIL 74
Query: 183 GELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNEN 242
GEL+LD SI GLLHDT+EDT + T E + E FG+ V +V+G TK+SK + +
Sbjct: 75 GELKLDEASIVTGLLHDTIEDT-LATEEELTELFGSEVAHLVDGVTKLSKF----SASAS 129
Query: 243 HSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQ------------- 289
S ++ +A++ R+M +AM +++RVI+VKLADR HNMRTL HM KQ
Sbjct: 130 LSQEEKQAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIAQETLDIYAP 189
Query: 290 -----------SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQ 338
+ELE+LSF Y +++ ++ ++ KE EK +E+ ++ K+ +
Sbjct: 190 LANRLGISWIKTELEDLSFRYVKPQEFFALQAKLNKRKKEREKYIEDTCDLIRSKLAE-- 247
Query: 339 FLDLMTVKTEIRSVCKEPYSIYKAVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSP 397
+K E+ K YSIYK + KS+G ++++ I RII P
Sbjct: 248 ----RGLKGEVSGRFKHVYSIYKKI-KSQGIDFDQIHDIIAFRIIAPTAPS--------- 293
Query: 398 QQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEE 457
CY LGLVH +W P+P KD+IA PKPN YQSLHTT+I L E R+EVQIRT E
Sbjct: 294 ---CYEALGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTIIGPLSE---RVEVQIRTSE 347
Query: 458 MDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQE 517
M IAE GIAAH+ + GK V + + +WL + EWQ+
Sbjct: 348 MHKIAEEGIAAHW-----------------KYKEGKAVISKDDE---KFAWLRQLMEWQQ 387
Query: 518 EFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAA 577
+ +EF++T+ DL VFVFTP+G++++LP+GAT VD+AY IH+++GN+ V A
Sbjct: 388 DL---KDPKEFLETVKVDLFTDEVFVFTPKGDVRSLPRGATPVDFAYAIHSDVGNRCVGA 444
Query: 578 KVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRH--KQWLEHAKTRSARHKIMKFLRE 635
KVNG +V + + N + VE++T + Q+H K WL KT A+ +I F+++
Sbjct: 445 KVNGKIVPLRYKMKNGDTVEVLT--------SPQQHPSKDWLTFVKTSRAQQRIRGFIKQ 496
Query: 636 Q 636
Q
Sbjct: 497 Q 497
>sp|O54408|RELA_BACSU GTP pyrophosphokinase OS=Bacillus subtilis (strain 168) GN=relA
PE=3 SV=3
Length = 734
Score = 325 bits (833), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 195/522 (37%), Positives = 293/522 (56%), Gaps = 79/522 (15%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS + V +A + A +AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LH
Sbjct: 18 SYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D VEDT+V T + ++E F V +V+G V+KLGK+K K S ++ +A++ R+MF+
Sbjct: 78 DVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYK----SQEEQQAENHRKMFV 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS------------------------ELEN 294
AM +++RVI++KLADRLHNMRTL H+P KQ ELE+
Sbjct: 130 AMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELED 189
Query: 295 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 354
+ Y N + Y ++ + E E ++E + K++E+ + +K + K
Sbjct: 190 TALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE------VNIKADFSGRPK 243
Query: 355 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 414
YSIY+ ++ NE+ + +RI L + + CY VLG++H W P
Sbjct: 244 HIYSIYRKMVLQNKQFNEIYDLLAVRI------------LVNSIKDCYAVLGIIHTCWKP 291
Query: 415 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 474
+P KDYIA PKPN YQSLHTT+I + LEVQIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKPNMYQSLHTTVIGPKGDP---LEVQIRTFEMHEIAEYGVAAHWAYKE 348
Query: 475 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 534
G A G A ++SW I E+Q E + + EF++++
Sbjct: 349 ------GKAANEG------------ATFEKKLSWFREILEFQNE---STDAEEFMESLKI 387
Query: 535 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 594
DL V+VFTP+G++ LP G+ +D++Y IH+EIGNK + AKVNG +V+ H L +
Sbjct: 388 DLFSDMVYVFTPKGDVIELPSGSVPIDFSYRIHSEIGNKTIGAKVNGKMVTLDHKLRTGD 447
Query: 595 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 636
+VEI+T SK ++ + W++ A+T A+HKI +F ++Q
Sbjct: 448 IVEILT-----SKHSYGPSQDWVKLAQTSQAKHKIRQFFKKQ 484
>sp|P0A0E9|RELA_STAAW GTP pyrophosphokinase OS=Staphylococcus aureus (strain MW2) GN=relA
PE=3 SV=1
Length = 736
Score = 312 bits (800), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 191/529 (36%), Positives = 292/529 (55%), Gaps = 78/529 (14%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS--------------------- 290
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 291 ---ELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 347
ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 348 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 407
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 408 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 467
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 468 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 527
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 528 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 587
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 588 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 636
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>sp|P0A0F0|RELA_STAAU GTP pyrophosphokinase OS=Staphylococcus aureus GN=relA PE=3 SV=1
Length = 736
Score = 312 bits (800), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 191/529 (36%), Positives = 292/529 (55%), Gaps = 78/529 (14%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS--------------------- 290
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 291 ---ELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 347
ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 348 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 407
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 408 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 467
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 468 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 527
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 528 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 587
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 588 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 636
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>sp|Q6G8T5|RELA_STAAS GTP pyrophosphokinase OS=Staphylococcus aureus (strain MSSA476)
GN=relA PE=3 SV=1
Length = 736
Score = 312 bits (800), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 191/529 (36%), Positives = 292/529 (55%), Gaps = 78/529 (14%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS--------------------- 290
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 291 ---ELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 347
ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 348 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 407
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 408 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 467
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 468 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 527
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 528 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 587
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 588 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 636
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>sp|Q99TL8|RELA_STAAN GTP pyrophosphokinase OS=Staphylococcus aureus (strain N315)
GN=relA PE=1 SV=2
Length = 736
Score = 312 bits (800), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 191/529 (36%), Positives = 292/529 (55%), Gaps = 78/529 (14%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS--------------------- 290
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 291 ---ELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 347
ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 348 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 407
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 408 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 467
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 468 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 527
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 528 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 587
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 588 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 636
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>sp|Q6GG70|RELA_STAAR GTP pyrophosphokinase OS=Staphylococcus aureus (strain MRSA252)
GN=relA PE=3 SV=1
Length = 736
Score = 312 bits (800), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 191/529 (36%), Positives = 292/529 (55%), Gaps = 78/529 (14%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS--------------------- 290
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINT 189
Query: 291 ---ELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 347
ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 348 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 407
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 408 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 467
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 468 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 527
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 528 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 587
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 588 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 636
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>sp|Q931Q4|RELA_STAAM GTP pyrophosphokinase OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=relA PE=3 SV=2
Length = 736
Score = 312 bits (800), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 191/529 (36%), Positives = 292/529 (55%), Gaps = 78/529 (14%)
Query: 132 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWES 191
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPT 77
Query: 192 IAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKAD 251
I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A+
Sbjct: 78 IVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAE 129
Query: 252 DLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS--------------------- 290
+ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ
Sbjct: 130 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHHLGINT 189
Query: 291 ---ELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKT 347
ELE+ + Y + Y R+ +L K+ E E + + +I + +D M ++
Sbjct: 190 IKWELEDTALRYIDNVQYF----RIVNLMKKKRSEREAYIETAIDRIRTE--MDRMNIEG 243
Query: 348 EIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGL 407
+I K YSIY+ ++K + +++ + +R+I+ + CY +LGL
Sbjct: 244 DINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIV------------NSINDCYAILGL 291
Query: 408 VHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIA 467
VH +W P+P KDYIA PK N YQSLHTT++ + LE+QIRT +M IAE G+A
Sbjct: 292 VHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVG---PNGDPLEIQIRTFDMHEIAEHGVA 348
Query: 468 AHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSRE 527
AH++ + GK V + +++WL +E E + ++E
Sbjct: 349 AHWAYK-----------------EGKKVSEKDQTYQNKLNWL---KELAEADHTSSDAQE 388
Query: 528 FVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPT 587
F++T+ DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V
Sbjct: 389 FMETLKYDLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPID 448
Query: 588 HVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 636
++L ++VEI T SK ++ + WL+ K+ SA+ KI F ++Q
Sbjct: 449 YILQTGDIVEIRT-----SKHSYGPSRDWLKIVKSSSAKGKIKSFFKKQ 492
>sp|Q54089|RELA_STREQ Bifunctional (p)ppGpp synthase/hydrolase RelA OS=Streptococcus
dysgalactiae subsp. equisimilis GN=relA PE=1 SV=1
Length = 739
Score = 306 bits (783), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 182/522 (34%), Positives = 288/522 (55%), Gaps = 80/522 (15%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
Y++ + V++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LHD
Sbjct: 19 YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHD 78
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
VEDT++ T + IE +FG VR IV+G V+KLGK++ K+ + A++ R+M +A
Sbjct: 79 VVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMA 130
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHKQS------------------------ELENL 295
M++++RVI+VKLADRLHNMRTL H+ KQ ELE+L
Sbjct: 131 MSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDL 190
Query: 296 SFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDLMTVKTEIRSVCK 354
+F Y N ++ K+ + + +E E +++ KI E F D + K
Sbjct: 191 AFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQGLFGD-------VYGRPK 243
Query: 355 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 414
YSIY+ + + +++ + +R +++ Q Y ++G +H +W P
Sbjct: 244 HIYSIYRKMRDKKKRFDQIFDLIAIRCVMET------------QSDVYAMVGYIHELWRP 291
Query: 415 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 474
+P KDYIA PK NGYQS+HTT+ Y +E+QIRT+EM +AE G+AAH++ +
Sbjct: 292 MPGRFKDYIAAPKANGYQSIHTTV----YGPKGPIEIQIRTKEMHQVAEYGVAAHWAYK- 346
Query: 475 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 534
+ RGK +N A + ++W+ + E Q+ N + +FVD++
Sbjct: 347 -------------KGVRGK---VNQAEQKVGMNWIKELVELQD--ASNGDAVDFVDSVKE 388
Query: 535 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 594
D+ R++VFTP G ++ LPK + +D+AY IHT++G K + AKVNG +V T L +
Sbjct: 389 DIFSERIYVFTPTGAVQELPKDSGPIDFAYAIHTQVGEKAIGAKVNGRMVPLTAKLKTGD 448
Query: 595 VVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 636
VVEI+T + ++F + W++ KT AR+KI +F + Q
Sbjct: 449 VVEIVT-----NPNSFGPSRDWIKLVKTNKARNKIRQFFKNQ 485
>sp|Q8CS97|RELA_STAES GTP pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=relA PE=3 SV=1
Length = 729
Score = 301 bits (772), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 183/503 (36%), Positives = 279/503 (55%), Gaps = 78/503 (15%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS------------------------ELEN 294
A+ ++VRVI+VKLADRLHNMRTL MP KQ ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 295 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 354
+ Y ++ Y R+ +L K+ E E + KI+++ + M + EI K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE--MTKMNLSGEINGRPK 243
Query: 355 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 414
YSIY+ ++K + +++ + +RII+ + CY LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291
Query: 415 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 474
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347
Query: 475 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 534
GKTV + +++WL +E E + ++EF++++
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388
Query: 535 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 594
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V +VL +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448
Query: 595 VVEIITYNALSSKSAFQRHKQWL 617
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>sp|Q5HNR8|RELA_STAEQ GTP pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=relA PE=3 SV=1
Length = 729
Score = 301 bits (772), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 183/503 (36%), Positives = 279/503 (55%), Gaps = 78/503 (15%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LH
Sbjct: 18 SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLH 77
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+
Sbjct: 78 DVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFI 129
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS------------------------ELEN 294
A+ ++VRVI+VKLADRLHNMRTL MP KQ ELE+
Sbjct: 130 AIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELED 189
Query: 295 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 354
+ Y ++ Y R+ +L K+ E E + KI+++ + M + EI K
Sbjct: 190 TALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE--MTKMNLSGEINGRPK 243
Query: 355 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 414
YSIY+ ++K + +++ + +RII+ + CY LGLVH +W P
Sbjct: 244 HIYSIYRKMIKQKKQFDQIFDLLAIRIIV------------NSINDCYATLGLVHTLWKP 291
Query: 415 IPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 474
+P KDYIA PK N YQSLHTT++ + LE+QIRT EM IAE G+AAH++ +
Sbjct: 292 MPGRFKDYIAMPKQNMYQSLHTTVVG---PNGDPLEIQIRTHEMHEIAEHGVAAHWAYK- 347
Query: 475 FVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITR 534
GKTV + +++WL +E E + ++EF++++
Sbjct: 348 ----------------EGKTVNQKTQDFQNKLNWL---KELAETDHTSADAQEFMESLKY 388
Query: 535 DLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAE 594
DL +V+ FTP ++ LP GA +D+AY IH+E+GNKM+ AKVNG +V +VL +
Sbjct: 389 DLQSDKVYAFTPASDVIELPYGAVPIDFAYAIHSEVGNKMIGAKVNGKIVPIDYVLQTGD 448
Query: 595 VVEIITYNALSSKSAFQRHKQWL 617
++EI T SK ++ + WL
Sbjct: 449 IIEIRT-----SKHSYGPSRDWL 466
>sp|P74007|SPOT_SYNY3 Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=spoT
PE=3 SV=1
Length = 760
Score = 299 bits (765), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 190/531 (35%), Positives = 276/531 (51%), Gaps = 81/531 (15%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ RA A++ H Q+R+SGEP+I HPV VA +L +L D IAAG LHD VEDT++
Sbjct: 53 LICRAFCFAYDLHAQQRRKSGEPYIAHPVAVAGLLRDLGGDEAMIAAGFLHDVVEDTDI- 111
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
+ E+IE FG +VEG TK+SK S + +A++ R+MFLAM +++RVI
Sbjct: 112 SIEQIEALFGEETASLVEGVTKLSKFN-------FSSTTEHQAENFRRMFLAMAKDIRVI 164
Query: 268 IVKLADRLHNMRTLSHMPPHKQS------------------------ELENLSFMYTNAE 303
+VKLADRLHNMRTL + P KQ ELE+LSF Y +
Sbjct: 165 VVKLADRLHNMRTLDALSPEKQRRIARETKDIFAPLANRLGIWRFKWELEDLSFKYLEPD 224
Query: 304 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAV 363
Y K++ V + + E LE +L ++ D+ E++ K Y IY +
Sbjct: 225 SYRKIQSLVVEKRGDRESRLETVKDMLRFRLRDEGIEHF-----ELQGRPKHLYGIYYKM 279
Query: 364 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 423
+ E+ IA LRII++ K CY L +VH ++ PIP KDYI
Sbjct: 280 TSQDKAFEEIYDIAALRIIVESKGE------------CYRALSVVHDVFKPIPGRFKDYI 327
Query: 424 ATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHA 483
PKPN YQSLHTT++ LE+QIRTEEM +AE GIAAH+
Sbjct: 328 GLPKPNRYQSLHTTVLGLTSRP---LEIQIRTEEMHHVAEYGIAAHWK-----------Y 373
Query: 484 RPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFV 543
+ +G S + + +WL + +WQ + ++E+V+ + ++L V+V
Sbjct: 374 KESGGSENATLTSTDE-----KFTWLRQLLDWQSDL---KDAQEYVENLKQNLFDDDVYV 425
Query: 544 FTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNA 603
FTP+GE+ +L +GAT VD+AY IHTE+G+ M A+VNG + L N ++VEI+T
Sbjct: 426 FTPKGEVISLARGATPVDFAYRIHTEVGHHMKGARVNGQWLGVDTRLKNGDIVEIVTQK- 484
Query: 604 LSSKSAFQRHKQWLEHAKTRSARHKIMKFL----REQAALSASEITADTVG 650
+S + WL T SARH+I ++ R++ L E+ +G
Sbjct: 485 -NSHPSL----DWLNFVVTPSARHRIRQWFKRSRRDENILRGRELLEKELG 530
>sp|O67012|SPOT_AQUAE Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Aquifex
aeolicus (strain VF5) GN=spoT PE=3 SV=1
Length = 696
Score = 290 bits (743), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 201/532 (37%), Positives = 288/532 (54%), Gaps = 89/532 (16%)
Query: 130 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDW 189
L EDL +S+ P E ++RA A E H QKR++GEP+IIHP+ VA L EL +D
Sbjct: 9 LEEDLEKLLSHY-PQHAEEIQRAYEFAKEKHGEQKRKTGEPYIIHPLNVALKLAELGMDH 67
Query: 190 ESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVK 249
E+I A LLHDT+EDT+ T+E I+E FG V ++VEG V+K+GK+K K+E +
Sbjct: 68 ETIIAALLHDTLEDTDT-TYEEIKERFGERVAKLVEG---VTKIGKIKYKSE-------Q 116
Query: 250 ADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHK--------------------- 288
A++ R++ LA E+ RVI++KL+DRL N++TL K
Sbjct: 117 AENYRKLILATAEDPRVILLKLSDRLDNVKTLWVFREEKRKKIAKETMEIYAPLAHRLGV 176
Query: 289 ---QSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEA-NKILMKKIEDDQFLDLMT 344
++ELE+ +F Y E+Y KV+ + KE K LEE K ++ K+ + L+
Sbjct: 177 WSIKNELEDWAFKYLYPEEYEKVR----NFVKESRKNLEEYLRKYVIPKVRKE--LEKYG 230
Query: 345 VKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHV 404
++ EI+ K YSI++ + + +V+ I +RII+ P CY V
Sbjct: 231 IEAEIKYRSKHYYSIWEKTRRKGIRLEDVHDILGVRIIVNTVPE------------CYTV 278
Query: 405 LGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAER 464
LG++H ++ P+P KDYI+ PKPN YQSLHTT+I + +E QIRT EM AE+
Sbjct: 279 LGIIHSLFRPVPGKFKDYISLPKPNLYQSLHTTVIA---DKGKLVEFQIRTWEMHERAEK 335
Query: 465 GIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMT 524
GIA+H+ A G++P V SWL RE E G+
Sbjct: 336 GIASHW------------AYKEGKNPSDAGVY----------SWL---RELVESIQGSTN 370
Query: 525 SREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLV 584
E ++ + +L VFVFTP+G++ LPKG+T VD AY IHTE+GN AK NG +V
Sbjct: 371 PSEVLENLKSNLFFEEVFVFTPKGDLVVLPKGSTPVDLAYKIHTEVGNHCAGAKSNGRIV 430
Query: 585 SPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 636
+ L + +VVEIIT N S S +WL KT AR+KI +FL++Q
Sbjct: 431 PLNYELKSGDVVEIIT-NPNKSPSY-----EWLSFVKTSRARNKIKQFLKKQ 476
>sp|O51216|SPOT_BORBU Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP
102532 / DSM 4680) GN=spoT PE=3 SV=1
Length = 667
Score = 288 bits (736), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 289/523 (55%), Gaps = 91/523 (17%)
Query: 139 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLH 198
+Y E + + +AL +A + H GQ R SGEP+IIHP+ V+ L + +LD+++ AGLLH
Sbjct: 30 TYKDEFERKSIFKALEIAEQLHYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLH 89
Query: 199 DTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFL 258
D +EDTNV E I +EF + +++G TK+ L N+ S+++ A+ + +MF
Sbjct: 90 DVLEDTNVEK-EEIVKEFDEEILSLIDGVTKIHDLH-----NKTRSIKE--ANTISKMFF 141
Query: 259 AMTEEVRVIIVKLADRLHNMRTLSHMPPHKQ------------------------SELEN 294
AMT ++R+II+KLAD+LHNM TLS++P ++Q + LE+
Sbjct: 142 AMTHDIRIIIIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLED 201
Query: 295 LSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCK 354
LSF + +DY ++K +++ E EK+L + K+ ++ L ++ EI K
Sbjct: 202 LSFKHLYPKDYKEIKNFLSETKIEREKKLYKG------KLSIEKELQKSGIEAEITVRSK 255
Query: 355 EPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTP 414
YSI++ K + N++ QI G+ +C Q+ CY +L +VH +W P
Sbjct: 256 HFYSIFR---KMQTRTNKLTQIFD---------TLGIRIICKKQKECYEILEIVHRVWKP 303
Query: 415 IPRAMKDYIATPKPNGYQSLHTTL-IPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 473
IP +KDYIA+PK N YQSLHTT+ IP E +E+QIRTEEMD IA G+AAH+
Sbjct: 304 IPGRLKDYIASPKENKYQSLHTTVRIP---EDNQLIEIQIRTEEMDRIANYGVAAHW--- 357
Query: 474 VFVTGLVGHARPNGRSPRGKTVCLNNANIALR---ISWLNAIREWQEEFVGNMTSREFVD 530
+ I L+ +S++N I++WQ+E S+ ++
Sbjct: 358 -----------------------IYKEQIELKADDLSFINRIKKWQQESANK--SQYSMN 392
Query: 531 TITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVL 590
I ++LL + ++V+TP GE+ LP G+ +D+AY+IHT+IG++ + AK+NG + S T L
Sbjct: 393 DIHKELLNTFIYVYTPEGEVVELPFGSNSIDFAYIIHTDIGDQALYAKINGKISSITKPL 452
Query: 591 ANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL 633
N ++VEI T SK + + WL +T+ AR KI +L
Sbjct: 453 KNEQIVEIFT-----SKDS-KPDVIWLNSVRTKKARSKIRSWL 489
>sp|Q9KNM2|SPOT_VIBCH Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Vibrio
cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba
N16961) GN=spoT PE=1 SV=1
Length = 705
Score = 282 bits (721), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 275/521 (52%), Gaps = 84/521 (16%)
Query: 140 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHD 199
YL+ ++E +R++ ++A +AH+GQ R SGEP+IIHPV VARIL E+ LD E++ A LLHD
Sbjct: 14 YLTEPQIEALRQSYVVARDAHEGQTRSSGEPYIIHPVAVARILAEMRLDLETLQAALLHD 73
Query: 200 TVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLA 259
+ED + VT E ++ FG++V +V+G VSKL KLK ++ ++ +A++ R+M LA
Sbjct: 74 VIEDCD-VTKEDLDAHFGSSVAELVDG---VSKLDKLKFRDR----KEAQAENFRKMVLA 125
Query: 260 MTEEVRVIIVKLADRLHNMRTLSHMPPHK------------------------QSELENL 295
M +++RVI++KLADR NMRTL + P K ++ELE L
Sbjct: 126 MVQDIRVILIKLADRTPNMRTLGALRPDKKRRIARETLEIYAPLAHRLGIHNIKTELEEL 185
Query: 296 SFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKE 355
F Y +V + V + + KE ++++I + L V R V +E
Sbjct: 186 GFEALYPNRY-RVLKEVVKAARGNRKE-------MIQRIHSEIEGRLQEVGLPARVVGRE 237
Query: 356 P--YSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWT 413
+SIY + + + I RI++ CY VLG VH ++
Sbjct: 238 KNLFSIYNKMKTKEQRFHTIMDIYAFRIVV------------DTADTCYRVLGQVHSLYK 285
Query: 414 PIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGR 473
P P MKDYIA PK NGYQSLHT+++ +EVQIRTE+MD +A++G+AAH+S +
Sbjct: 286 PRPARMKDYIAVPKANGYQSLHTSMVG---PHGVPVEVQIRTEDMDQMADKGVAAHWSYK 342
Query: 474 VFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTIT 533
S RG T A W+ ++ E Q+ GN S EF++ +
Sbjct: 343 -------------ANSERGGTTAQIKAQ-----RWMQSLLELQQS-AGN--SFEFIENVK 381
Query: 534 RDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANA 593
DL ++VFTP+G I LP GAT VD+AY +HT+IGN V A+V+ + L +
Sbjct: 382 SDLFPDEIYVFTPKGRIVELPMGATAVDFAYAVHTDIGNTCVGARVDRTPYPLSQSLKSG 441
Query: 594 EVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 634
+ VEII+ +A WL + T AR KI + L+
Sbjct: 442 QTVEIISAPGARPNAA------WLNYVVTSRARTKIRQVLK 476
>sp|P0AG26|SPOT_SHIFL Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Shigella flexneri GN=spoT PE=3 SV=1
Length = 702
Score = 274 bits (700), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 187/535 (34%), Positives = 281/535 (52%), Gaps = 92/535 (17%)
Query: 130 LWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
L+E L I +YL ++++ +R+A ++A +AH+GQ R SGEP+I HPV VA IL E++LD
Sbjct: 3 LFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+E++ A LLHD +EDT T++ +E+ FG +V +VEG VSKL KLK +++ ++
Sbjct: 63 YETLMAALLHDVIEDTP-ATYQDMEQLFGKSVAELVEG---VSKLDKLKFRDK----KEA 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPP---------------------- 286
+A++ R+M +AM +++RVI++KLADR HNMRTL + P
Sbjct: 115 QAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLG 174
Query: 287 --HKQSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 344
H ++ELE L F Y +V + V + + KE+ KIL E + L
Sbjct: 175 IHHIKTELEELGFEALYPNRY-RVIKEVVKAARGNRKEM--IQKILS---EIEGRLQEAG 228
Query: 345 VKTEIRSVCKEPYSIY-KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 403
+ + K YSIY K VLK + + + I R+I+ + CY
Sbjct: 229 IPCRVSGREKHLYSIYCKMVLKEQ-RFHSIMDIYAFRVIV------------NDSDTCYR 275
Query: 404 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 463
VLG +H ++ P P +KDYIA PK NGYQSLHT++I +EVQIRTE+MD +AE
Sbjct: 276 VLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIG---PHGVPVEVQIRTEDMDQMAE 332
Query: 464 RGIAAHYS----GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 519
G+AAH++ G T + R W+ ++ E Q+
Sbjct: 333 MGVAAHWAYKEHGETSTTAQIRAQR-----------------------WMQSLLELQQ-- 367
Query: 520 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 579
+S EF++++ DL ++VFTP G I LP GAT VD+AY +HT+IG+ V A+V
Sbjct: 368 -SAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHACVGARV 426
Query: 580 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 634
+ + L + + VEIIT +A WL + AR KI + L+
Sbjct: 427 DRQPYPLSQPLTSGQTVEIITAPGARPNAA------WLNFVVSSKARAKIRQLLK 475
>sp|P0AG24|SPOT_ECOLI Bifunctional (p)ppGpp synthase/hydrolase SpoT OS=Escherichia coli
(strain K12) GN=spoT PE=1 SV=1
Length = 702
Score = 274 bits (700), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 187/535 (34%), Positives = 281/535 (52%), Gaps = 92/535 (17%)
Query: 130 LWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
L+E L I +YL ++++ +R+A ++A +AH+GQ R SGEP+I HPV VA IL E++LD
Sbjct: 3 LFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+E++ A LLHD +EDT T++ +E+ FG +V +VEG VSKL KLK +++ ++
Sbjct: 63 YETLMAALLHDVIEDTP-ATYQDMEQLFGKSVAELVEG---VSKLDKLKFRDK----KEA 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPP---------------------- 286
+A++ R+M +AM +++RVI++KLADR HNMRTL + P
Sbjct: 115 QAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLG 174
Query: 287 --HKQSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 344
H ++ELE L F Y +V + V + + KE+ KIL E + L
Sbjct: 175 IHHIKTELEELGFEALYPNRY-RVIKEVVKAARGNRKEM--IQKILS---EIEGRLQEAG 228
Query: 345 VKTEIRSVCKEPYSIY-KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 403
+ + K YSIY K VLK + + + I R+I+ + CY
Sbjct: 229 IPCRVSGREKHLYSIYCKMVLKEQ-RFHSIMDIYAFRVIV------------NDSDTCYR 275
Query: 404 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 463
VLG +H ++ P P +KDYIA PK NGYQSLHT++I +EVQIRTE+MD +AE
Sbjct: 276 VLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIG---PHGVPVEVQIRTEDMDQMAE 332
Query: 464 RGIAAHYS----GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 519
G+AAH++ G T + R W+ ++ E Q+
Sbjct: 333 MGVAAHWAYKEHGETSTTAQIRAQR-----------------------WMQSLLELQQ-- 367
Query: 520 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 579
+S EF++++ DL ++VFTP G I LP GAT VD+AY +HT+IG+ V A+V
Sbjct: 368 -SAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHACVGARV 426
Query: 580 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 634
+ + L + + VEIIT +A WL + AR KI + L+
Sbjct: 427 DRQPYPLSQPLTSGQTVEIITAPGARPNAA------WLNFVVSSKARAKIRQLLK 475
>sp|P0AG25|SPOT_ECO57 Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Escherichia coli O157:H7 GN=spoT PE=3 SV=1
Length = 702
Score = 274 bits (700), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 187/535 (34%), Positives = 281/535 (52%), Gaps = 92/535 (17%)
Query: 130 LWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELD 188
L+E L I +YL ++++ +R+A ++A +AH+GQ R SGEP+I HPV VA IL E++LD
Sbjct: 3 LFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLD 62
Query: 189 WESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDV 248
+E++ A LLHD +EDT T++ +E+ FG +V +VEG VSKL KLK +++ ++
Sbjct: 63 YETLMAALLHDVIEDTP-ATYQDMEQLFGKSVAELVEG---VSKLDKLKFRDK----KEA 114
Query: 249 KADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPP---------------------- 286
+A++ R+M +AM +++RVI++KLADR HNMRTL + P
Sbjct: 115 QAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLG 174
Query: 287 --HKQSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMT 344
H ++ELE L F Y +V + V + + KE+ KIL E + L
Sbjct: 175 IHHIKTELEELGFEALYPNRY-RVIKEVVKAARGNRKEM--IQKILS---EIEGRLQEAG 228
Query: 345 VKTEIRSVCKEPYSIY-KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYH 403
+ + K YSIY K VLK + + + I R+I+ + CY
Sbjct: 229 IPCRVSGREKHLYSIYCKMVLKEQ-RFHSIMDIYAFRVIV------------NDSDTCYR 275
Query: 404 VLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAE 463
VLG +H ++ P P +KDYIA PK NGYQSLHT++I +EVQIRTE+MD +AE
Sbjct: 276 VLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIG---PHGVPVEVQIRTEDMDQMAE 332
Query: 464 RGIAAHYS----GRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEF 519
G+AAH++ G T + R W+ ++ E Q+
Sbjct: 333 MGVAAHWAYKEHGETSTTAQIRAQR-----------------------WMQSLLELQQ-- 367
Query: 520 VGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKV 579
+S EF++++ DL ++VFTP G I LP GAT VD+AY +HT+IG+ V A+V
Sbjct: 368 -SAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHACVGARV 426
Query: 580 NGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLR 634
+ + L + + VEIIT +A WL + AR KI + L+
Sbjct: 427 DRQPYPLSQPLTSGQTVEIITAPGARPNAA------WLNFVVSSKARAKIRQLLK 475
>sp|Q8YG65|RSH_BRUME GTP pyrophosphokinase rsh OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=rsh PE=1 SV=2
Length = 750
Score = 273 bits (699), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 178/491 (36%), Positives = 269/491 (54%), Gaps = 77/491 (15%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ +A + A + H QKR SG+P+ HP+EVA IL ++ LD +IA LLHDT+EDT
Sbjct: 22 LLNKAYVYAMQKHRSQKRASGDPYFSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTA- 80
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T + I++ FG + ++VEG TK+ KL + K V+A++LR++ LA++E+VRV+
Sbjct: 81 TRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKA-------VQAENLRKLLLAISEDVRVL 133
Query: 268 IVKLADRLHNMRTLSHMPPHKQ------------------------SELENLSFMYTNAE 303
+VKLADRLHNMRTL M K+ ELE L+F Y N +
Sbjct: 134 LVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPD 193
Query: 304 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--QFLDLMTVKTEIRSVCKEPYSIYK 361
+ V R+A EL E N+ L++KIE D + + +K ++S K+P+S+++
Sbjct: 194 AWRAVTDRLA--------ELLEKNRGLLQKIETDLSEIFEKNGIKASVKSRQKKPWSVFR 245
Query: 362 AVLKSRG-SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 420
++S+G S +++ I R+++ Q CY LGL+H W+ +P K
Sbjct: 246 K-MESKGLSFEQLSDIFGFRVMV------------DTVQDCYRALGLIHTTWSMVPGRFK 292
Query: 421 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 480
DYI+TPK N Y+S+HTT+I S R+E+QIRT EMD IAE G+AAH +
Sbjct: 293 DYISTPKQNDYRSIHTTII---GPSRQRIELQIRTREMDEIAEFGVAAHS---------I 340
Query: 481 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 540
R + +P K NA +WL R+ E+ EF++ +L +
Sbjct: 341 YKDRGSANNPH-KISTETNA-----YAWL---RQTIEQLSEGDNPEEFLEHTKLELFQDQ 391
Query: 541 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 600
VF FTP+G + LP+GAT +D+AY +HT+IG+ V AKVNG ++ L N + V+II
Sbjct: 392 VFCFTPKGRLIALPRGATPIDFAYAVHTDIGDSCVGAKVNGRIMPLMTELKNGDEVDIIR 451
Query: 601 YNALSSKSAFQ 611
A +A++
Sbjct: 452 SKAQVPPAAWE 462
>sp|Q57E90|RSH_BRUAB GTP pyrophosphokinase rsh OS=Brucella abortus biovar 1 (strain
9-941) GN=rsh PE=1 SV=1
Length = 750
Score = 273 bits (699), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 176/490 (35%), Positives = 265/490 (54%), Gaps = 75/490 (15%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ +A + A + H QKR SG+P+ HP+EVA IL ++ LD +IA LLHDT+EDT
Sbjct: 22 LLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTA- 80
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T + I++ FG + ++VEG TK+ KL + K V+A++LR++ LA++E+VRV+
Sbjct: 81 TRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKA-------VQAENLRKLLLAISEDVRVL 133
Query: 268 IVKLADRLHNMRTLSHMPPHKQ------------------------SELENLSFMYTNAE 303
+VKLADRLHNMRTL M K+ ELE L+F Y N +
Sbjct: 134 LVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPD 193
Query: 304 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--QFLDLMTVKTEIRSVCKEPYSIYK 361
+ V R+A EL E N+ L++KIE D + + +K ++S K+P+S+++
Sbjct: 194 AWRAVTDRLA--------ELLEKNRGLLQKIETDLSEIFEKNGIKASVKSRQKKPWSVFR 245
Query: 362 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 421
+ S +++ I R+++ Q CY LGL+H W+ +P KD
Sbjct: 246 KMETKGLSFEQLSDIFGFRVMV------------DTVQDCYRALGLIHTTWSMVPGRFKD 293
Query: 422 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 481
YI+TPK N Y+S+HTT+I S R+E+QIRT EMD IAE G+AAH +
Sbjct: 294 YISTPKQNDYRSIHTTII---GPSRQRIELQIRTREMDEIAEFGVAAHS---------IY 341
Query: 482 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 541
R + +P K NA +WL R+ E+ EF++ +L +V
Sbjct: 342 KDRGSANNPH-KISTETNA-----YAWL---RQTIEQLSEGDNPEEFLEHTKLELFQDQV 392
Query: 542 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 601
F FTP+G + LP+GAT +D+AY +HT+IG+ V AKVNG ++ L N + V+II
Sbjct: 393 FCFTPKGRLIALPRGATPIDFAYAVHTDIGDSCVGAKVNGRIMPLMTELKNGDEVDIIRS 452
Query: 602 NALSSKSAFQ 611
A +A++
Sbjct: 453 KAQVPPAAWE 462
>sp|Q2YN11|RSH_BRUA2 GTP pyrophosphokinase rsh OS=Brucella abortus (strain 2308) GN=rsh
PE=3 SV=1
Length = 750
Score = 273 bits (699), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 176/490 (35%), Positives = 265/490 (54%), Gaps = 75/490 (15%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ +A + A + H QKR SG+P+ HP+EVA IL ++ LD +IA LLHDT+EDT
Sbjct: 22 LLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTA- 80
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T + I++ FG + ++VEG TK+ KL + K V+A++LR++ LA++E+VRV+
Sbjct: 81 TRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKA-------VQAENLRKLLLAISEDVRVL 133
Query: 268 IVKLADRLHNMRTLSHMPPHKQ------------------------SELENLSFMYTNAE 303
+VKLADRLHNMRTL M K+ ELE L+F Y N +
Sbjct: 134 LVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPD 193
Query: 304 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--QFLDLMTVKTEIRSVCKEPYSIYK 361
+ V R+A EL E N+ L++KIE D + + +K ++S K+P+S+++
Sbjct: 194 AWRAVTDRLA--------ELLEKNRGLLQKIETDLSEIFEKNGIKASVKSRQKKPWSVFR 245
Query: 362 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 421
+ S +++ I R+++ Q CY LGL+H W+ +P KD
Sbjct: 246 KMETKGLSFEQLSDIFGFRVMV------------DTVQDCYRALGLIHTTWSMVPGRFKD 293
Query: 422 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 481
YI+TPK N Y+S+HTT+I S R+E+QIRT EMD IAE G+AAH +
Sbjct: 294 YISTPKQNDYRSIHTTII---GPSRQRIELQIRTREMDEIAEFGVAAHS---------IY 341
Query: 482 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 541
R + +P K NA +WL R+ E+ EF++ +L +V
Sbjct: 342 KDRGSANNPH-KISTETNA-----YAWL---RQTIEQLSEGDNPEEFLEHTKLELFQDQV 392
Query: 542 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 601
F FTP+G + LP+GAT +D+AY +HT+IG+ V AKVNG ++ L N + V+II
Sbjct: 393 FCFTPKGRLIALPRGATPIDFAYAVHTDIGDSCVGAKVNGRIMPLMTELKNGDEVDIIRS 452
Query: 602 NALSSKSAFQ 611
A +A++
Sbjct: 453 KAQVPPAAWE 462
>sp|A5VPI9|RSH_BRUO2 GTP pyrophosphokinase rsh OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=rsh PE=3 SV=1
Length = 750
Score = 273 bits (698), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 176/490 (35%), Positives = 265/490 (54%), Gaps = 75/490 (15%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ +A + A + H QKR SG+P+ HP+EVA IL ++ LD +IA LLHDT+EDT
Sbjct: 22 LLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTA- 80
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T + I++ FG + ++VEG TK+ KL + K V+A++LR++ LA++E+VRV+
Sbjct: 81 TRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKA-------VQAENLRKLLLAISEDVRVL 133
Query: 268 IVKLADRLHNMRTLSHMPPHKQ------------------------SELENLSFMYTNAE 303
+VKLADRLHNMRTL M K+ ELE L+F Y N +
Sbjct: 134 LVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPD 193
Query: 304 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--QFLDLMTVKTEIRSVCKEPYSIYK 361
+ V R+A EL E N+ L++KIE D + + +K ++S K+P+S+++
Sbjct: 194 AWRAVTDRLA--------ELLEKNRGLLQKIETDLSEIFEKNGIKASVKSRQKKPWSVFR 245
Query: 362 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 421
+ S +++ I R+++ Q CY LGL+H W+ +P KD
Sbjct: 246 KMETKGLSFEQLSDIFGFRVMV------------DTVQDCYRALGLIHTTWSMVPGRFKD 293
Query: 422 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 481
YI+TPK N Y+S+HTT+I S R+E+QIRT EMD IAE G+AAH +
Sbjct: 294 YISTPKQNDYRSIHTTII---GPSRQRIELQIRTREMDEIAEFGVAAHS---------IY 341
Query: 482 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 541
R + +P K NA +WL R+ E+ EF++ +L +V
Sbjct: 342 KDRGSANNPH-KISTETNA-----YAWL---RQTIEQLSEGDNPEEFLEHTKLELFQDQV 392
Query: 542 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 601
F FTP+G + LP+GAT +D+AY +HT+IG+ V AKVNG ++ L N + V+II
Sbjct: 393 FCFTPKGRLIALPRGATPIDFAYAVHTDIGDSCVGAKVNGRIMPLMTELKNGDEVDIIRS 452
Query: 602 NALSSKSAFQ 611
A +A++
Sbjct: 453 KAQVPPAAWE 462
>sp|Q8CY42|RSH_BRUSU GTP pyrophosphokinase rsh OS=Brucella suis biovar 1 (strain 1330)
GN=rsh PE=1 SV=1
Length = 750
Score = 273 bits (697), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 176/490 (35%), Positives = 265/490 (54%), Gaps = 75/490 (15%)
Query: 148 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVV 207
L+ +A + A + H QKR SG+P+ HP+EVA IL ++ LD +IA LLHDT+EDT
Sbjct: 22 LLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTA- 80
Query: 208 TFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVI 267
T + I++ FG + ++VEG TK+ KL + K V+A++LR++ LA++E+VRV+
Sbjct: 81 TRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKA-------VQAENLRKLLLAISEDVRVL 133
Query: 268 IVKLADRLHNMRTLSHMPPHKQ------------------------SELENLSFMYTNAE 303
+VKLADRLHNMRTL M K+ ELE L+F Y N +
Sbjct: 134 LVKLADRLHNMRTLGVMCEDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPD 193
Query: 304 DYAKVKRRVADLYKEHEKELEEANKILMKKIEDD--QFLDLMTVKTEIRSVCKEPYSIYK 361
+ V R+A EL E N+ L++KIE D + + +K ++S K+P+S+++
Sbjct: 194 AWRAVTDRLA--------ELLEKNRGLLQKIETDLSEIFEKNGIKASVKSRQKKPWSVFR 245
Query: 362 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 421
+ S +++ I R+++ Q CY LGL+H W+ +P KD
Sbjct: 246 KMETKGLSFEQLSDIFGFRVMV------------DTVQDCYRALGLIHTTWSMVPGRFKD 293
Query: 422 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 481
YI+TPK N Y+S+HTT+I S R+E+QIRT EMD IAE G+AAH +
Sbjct: 294 YISTPKQNDYRSIHTTII---GPSRQRIELQIRTREMDEIAEFGVAAHS---------IY 341
Query: 482 HARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRV 541
R + +P K NA +WL R+ E+ EF++ +L +V
Sbjct: 342 KDRGSANNPH-KISTETNA-----YAWL---RQTIEQLSEGDNPEEFLEHTKLELFQDQV 392
Query: 542 FVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITY 601
F FTP+G + LP+GAT +D+AY +HT+IG+ V AKVNG ++ L N + V+II
Sbjct: 393 FCFTPKGRLIALPRGATPIDFAYAVHTDIGDSCVGAKVNGRIMPLMTELKNGDEVDIIRS 452
Query: 602 NALSSKSAFQ 611
A +A++
Sbjct: 453 KAQVPPAAWE 462
>sp|P52560|RELA_STRCO GTP pyrophosphokinase OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=relA PE=3 SV=1
Length = 847
Score = 265 bits (678), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 178/530 (33%), Positives = 272/530 (51%), Gaps = 70/530 (13%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
L + RA +A H GQKR+SG+P+I HP+ V IL EL +D ++ AGLLHDTVEDT
Sbjct: 124 LRQIERAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTE 183
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
E + +FG V +V+G V+KL K+K + +A+ +R+M +AM ++ R
Sbjct: 184 Y-GLEDLRRDFGDVVTLLVDG---VTKLDKVKFG------EAAQAETVRKMVVAMAKDPR 233
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQS------------------------ELENLSFMYTN 301
V+++KLADRLHNMRT+ ++ KQ ELE+L+F
Sbjct: 234 VLVIKLADRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILY 293
Query: 302 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 361
+ Y ++ R VA E + +E ++ +++ D L +K + K YS+Y+
Sbjct: 294 PKMYDEIVRLVA----ERAPKRDEYLAVVTDEVQQD--LRAARIKATVTGRPKHYYSVYQ 347
Query: 362 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 421
++ E+ + +R+ L + CY LG VH W P+P KD
Sbjct: 348 KMIVRGRDFAEIYDLVGIRV------------LVDTVRDCYAALGTVHARWNPVPGRFKD 395
Query: 422 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 481
YIA PK N YQSLHTT+I +E+QIRT +M AE GIAAH+ +
Sbjct: 396 YIAMPKFNMYQSLHTTVI---GPGGKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGAS 452
Query: 482 HARPNGRSPRGKTV--CLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 539
R + GK+ LN+ ++WL + +WQ+E EF++++ DL +
Sbjct: 453 KVRTDAPKSSGKSKDDHLND------MAWLRQLLDWQKE---TEDPGEFLESLRFDLSRN 503
Query: 540 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 599
VFVFTP+G++ LP GAT VD+AY +HTE+G++ + A+VNG LV L N ++VE+
Sbjct: 504 EVFVFTPKGDVIALPAGATPVDFAYAVHTEVGHRTIGARVNGRLVPLESTLDNGDLVEVF 563
Query: 600 TYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTV 649
T A + + + WL K+ AR+KI + ++ A E D +
Sbjct: 564 TSKAAGAGPS----RDWLGFVKSPRARNKIRAWFSKERRDEAIEQGKDAI 609
>sp|Q49640|RELA_MYCLE Probable GTP pyrophosphokinase OS=Mycobacterium leprae (strain TN)
GN=relA PE=3 SV=1
Length = 787
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 268/527 (50%), Gaps = 82/527 (15%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
L +V+RA +A + H Q RRSG+P+I HP+ VA IL EL +D ++ A LLHDTVEDT
Sbjct: 77 LSIVQRAFEVADQRHASQLRRSGDPYITHPLAVANILAELGMDITTLVAALLHDTVEDTG 136
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
T E + EEFG V +V+G TK+ ++ L E ++ R+M AM + R
Sbjct: 137 Y-TLEALSEEFGDEVGHLVDGVTKLDRV-VLGSAAEGETI--------RKMITAMARDPR 186
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQS------------------------ELENLSFMYTN 301
V+++K+ADRLHNMRT+ +PP KQ+ ELE+LSF +
Sbjct: 187 VLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASVKWELEDLSFAILH 246
Query: 302 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 361
+ Y ++ R VA + L + ++ L +K + K +SIY+
Sbjct: 247 PKKYEEIVRLVAGRAPSRDTYLAKVRAEIIST------LGASKIKATVEGRPKHYWSIYQ 300
Query: 362 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 421
++ ++++ + +RI LC + CY +G+VH +W P+ KD
Sbjct: 301 KMIVKGRDFDDIHDLVGIRI------------LCDEIRDCYAAVGVVHSLWQPMAGRFKD 348
Query: 422 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 481
YIA P+ YQSLHTT++ + LEVQIRT +M AE GIAAH+
Sbjct: 349 YIAQPRYGVYQSLHTTVVGPEGKP---LEVQIRTRDMHRTAEYGIAAHW----------- 394
Query: 482 HARPNGRSPRGKTVCLNNANIAL--RISWLNAIREWQEEFVGNMTSREFVDTITRDLLGS 539
+ +G+ L+ A ++W+ + +WQ E EF++++ DL
Sbjct: 395 ----RYKEAKGRNGVLHPHAAAEIDDMAWMRQLLDWQRE---AAEPGEFLESLRYDLAVQ 447
Query: 540 RVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEII 599
+FVFTP+G++ LP G+T VD+AY +HTE+G++ + A+VNG LV+ L N E VEI
Sbjct: 448 EIFVFTPKGDVITLPTGSTPVDFAYAVHTEVGHRCIGARVNGRLVALERKLENGEFVEIF 507
Query: 600 TYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFL---REQAALSASE 643
T A ++ + + W + + A+ KI ++ R + AL A +
Sbjct: 508 TSKAPNAGPS----RDWQQFVVSPRAKTKIRQWFAKERREEALEAGK 550
>sp|O85709|RELA_STRAT GTP pyrophosphokinase OS=Streptomyces antibioticus GN=relA PE=3
SV=1
Length = 841
Score = 260 bits (665), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 272/530 (51%), Gaps = 69/530 (13%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
L + +A +A H GQKR+SG+P+I HP+ V IL EL +D ++ AGLLHD+ EDT
Sbjct: 121 LRQIEKAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDSREDTE 180
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
+ + +FG V +V+G V+KL K+K + +A+ +R+M +AM ++ R
Sbjct: 181 Y-GLDDLRRDFGDVVGLLVDG---VTKLDKVKFG------EAAQAETVRKMVVAMAKDPR 230
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQS------------------------ELENLSFMYTN 301
V+++KLADRLHNMRT+ ++ KQ ELE+L+F
Sbjct: 231 VLVIKLADRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILY 290
Query: 302 AEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYK 361
+ Y ++ R VA E + +E I+ +++ D L +K + K YS+Y+
Sbjct: 291 PKMYDEIVRLVA----ERAPKRDEYLAIVTDEVQSD--LRARRIKATVTGRPKHYYSVYQ 344
Query: 362 AVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKD 421
++ E+ + +R+ L + CY LG VH W P+P KD
Sbjct: 345 KIIVRGRDFAEIYDLVGIRV------------LVDTVRDCYAALGTVHARWNPVPGRFKD 392
Query: 422 YIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVG 481
YIA PK N YQSLHTT+I + +E+QIRT +M AE GIAAH+ +
Sbjct: 393 YIAMPKFNMYQSLHTTVI---GPNGKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVARAS 449
Query: 482 HARPNGRSP-RGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 540
R + P +GK LN+ ++WL + +WQ+E EF++++ DL +
Sbjct: 450 KVRTDVPKPAKGKDDHLND------MAWLRQLLDWQKE---TEDPGEFLESLRFDLSRNE 500
Query: 541 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 600
VFVFTP+ ++ LP GAT VD+AY +HTE+G++ + A+VNG LV L N ++VE+ T
Sbjct: 501 VFVFTPKSDVIALPAGATPVDFAYAVHTEVGHRTIGARVNGRLVPLESTLDNGDLVEVFT 560
Query: 601 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVG 650
A + + + WL K+ AR+KI + ++ A E D +
Sbjct: 561 SKAAGAGPS----RDWLGFVKSPRARNKIRAWFSKERRDEAIEQGKDAIA 606
>sp|P66014|RELA_MYCTU Bifunctional (p)ppGpp synthase/hydrolase relA OS=Mycobacterium
tuberculosis GN=relA PE=1 SV=2
Length = 738
Score = 259 bits (662), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 170/539 (31%), Positives = 273/539 (50%), Gaps = 79/539 (14%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+L +++RA +A + H Q R+SG+P+I HP+ VA IL EL +D ++ A LLHDTVEDT
Sbjct: 27 DLSILQRAYEVADQRHASQLRQSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDT 86
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
T E + EEFG V +V+G TK+ ++ L E ++ R+M AM +
Sbjct: 87 GY-TLEALTEEFGEEVGHLVDGVTKLDRV-VLGSAAEGETI--------RKMITAMARDP 136
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQS------------------------ELENLSFMYT 300
RV+++K+ADRLHNMRT+ +PP KQ+ ELE+LSF
Sbjct: 137 RVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASVKWELEDLSFAIL 196
Query: 301 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 360
+ + Y ++ R VA + L + ++ + + +K + K +SIY
Sbjct: 197 HPKKYEEIVRLVAGRAPSRDTYLAKVRAEIVNTLTASK------IKATVEGRPKHYWSIY 250
Query: 361 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 420
+ ++ ++++ + +RI LC + CY +G+VH +W P+ K
Sbjct: 251 QKMIVKGRDFDDIHDLVGVRI------------LCDEIRDCYAAVGVVHSLWQPMAGRFK 298
Query: 421 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 480
DYIA P+ YQSLHTT++ + LEVQIRT +M AE GIAAH+
Sbjct: 299 DYIAQPRYGVYQSLHTTVVGPEGKP---LEVQIRTRDMHRTAEYGIAAHW---------- 345
Query: 481 GHARPNGRSPRGKTVCLNNANIAL--RISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 538
+ +G+ L+ A ++W+ + +WQ E EF++++ DL
Sbjct: 346 -----RYKEAKGRNGVLHPHAAAEIDDMAWMRQLLDWQRE---AADPGEFLESLRYDLAV 397
Query: 539 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 598
+FVFTP+G++ LP G+T VD+AY +HTE+G++ + A+VNG LV+ L N EVVE+
Sbjct: 398 QEIFVFTPKGDVITLPTGSTPVDFAYAVHTEVGHRCIGARVNGRLVALERKLENGEVVEV 457
Query: 599 ITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVADSG 657
T A ++ + + W + + A+ KI ++ ++ A E D + V G
Sbjct: 458 FTSKAPNAGPS----RDWQQFVVSPRAKTKIRQWFAKERREEALETGKDAMAREVRRGG 512
>sp|O34098|SPOT_SPICI Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Spiroplasma citri GN=spoT PE=3 SV=1
Length = 749
Score = 259 bits (662), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 192/537 (35%), Positives = 285/537 (53%), Gaps = 90/537 (16%)
Query: 146 LELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTN 205
L+ +++A A E H GQ R SG +IIHP+ L + + +++ AGLLHD +EDT
Sbjct: 24 LKEIQKAYEYAEEKHHGQVRNSGARYIIHPLWTTFFLAQWRMGPKTLIAGLLHDVLEDTP 83
Query: 206 VVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVR 265
TFE ++E FG + +VEG TKVS K EN + +KA LR+++L+M +++R
Sbjct: 84 A-TFEELQELFGIEIANLVEGVTKVSYFAK-----ENRT--QIKAQYLRKLYLSMAKDIR 135
Query: 266 VIIVKLADRLHNMRTLSHMPPHKQS------------------------ELENLSFMYTN 301
VIIVKLADRLHN++T+ ++ P +Q E+E++SF N
Sbjct: 136 VIIVKLADRLHNLKTIGYLKPERQQIIARESLEIYSAIAHRLGMKAVKQEIEDISFKIIN 195
Query: 302 AEDYAKVKRRVADLYKEHE----KELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPY 357
Y K+ + KE E +++EE KIL+ + + M+VK RS K Y
Sbjct: 196 PVQYNKIVSLLESSNKERENTINQKIEELKKILITEKK-------MSVKVYGRS--KSIY 246
Query: 358 SIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPR 417
SIY+ + + + ++++ I +RII + V CY VLG VH +TP+
Sbjct: 247 SIYRKMNQFGKNFDDIHDILAVRII-----TNSVDD-------CYKVLGFVHQHYTPLNN 294
Query: 418 AMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVT 477
KDYIATPK N YQSLHTT++ + EVQIRTEEMD +AE+G+AAH+ +
Sbjct: 295 RFKDYIATPKHNLYQSLHTTIVA---DDGLIFEVQIRTEEMDELAEQGVAAHWRYK---- 347
Query: 478 GLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIR-----EWQEEFVGNMTSREFVDTI 532
N + + +I RI L I E Q+E E + I
Sbjct: 348 -----EGENYDIAKKQKDIDERLDIFKRILDLENISVQERDEIQQEVYKPDHLMEQI--I 400
Query: 533 TRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP-THVLA 591
D+ S ++V TP G++ LP G+TV+D+AY IH+EIG K + AK+NG L SP + VL
Sbjct: 401 QNDIFSSLIYVLTPNGKVVTLPFGSTVLDFAYKIHSEIGEKTIGAKING-LFSPISTVLK 459
Query: 592 NAEVVEIITYNALSSKSAFQR-HKQWLEHAKTRSARHKIMKFLREQAALSASEITAD 647
+ +VV+I T +A Q+ + WL +KT SA KI K+L+++ E+T+D
Sbjct: 460 SGDVVDIKT-------AATQKPNHSWLVVSKTSSALEKIKKYLKKELV----EVTSD 505
>sp|P66015|RELA_MYCBO Probable GTP pyrophosphokinase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=relA PE=3 SV=1
Length = 790
Score = 259 bits (661), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 170/539 (31%), Positives = 273/539 (50%), Gaps = 79/539 (14%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+L +++RA +A + H Q R+SG+P+I HP+ VA IL EL +D ++ A LLHDTVEDT
Sbjct: 79 DLSILQRAYEVADQRHASQLRQSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDT 138
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
T E + EEFG V +V+G TK+ ++ L E ++ R+M AM +
Sbjct: 139 GY-TLEALTEEFGEEVGHLVDGVTKLDRV-VLGSAAEGETI--------RKMITAMARDP 188
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQS------------------------ELENLSFMYT 300
RV+++K+ADRLHNMRT+ +PP KQ+ ELE+LSF
Sbjct: 189 RVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASVKWELEDLSFAIL 248
Query: 301 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 360
+ + Y ++ R VA + L + ++ + + +K + K +SIY
Sbjct: 249 HPKKYEEIVRLVAGRAPSRDTYLAKVRAEIVNTLTASK------IKATVEGRPKHYWSIY 302
Query: 361 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 420
+ ++ ++++ + +RI LC + CY +G+VH +W P+ K
Sbjct: 303 QKMIVKGRDFDDIHDLVGVRI------------LCDEIRDCYAAVGVVHSLWQPMAGRFK 350
Query: 421 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 480
DYIA P+ YQSLHTT++ + LEVQIRT +M AE GIAAH+
Sbjct: 351 DYIAQPRYGVYQSLHTTVVGPEGKP---LEVQIRTRDMHRTAEYGIAAHW---------- 397
Query: 481 GHARPNGRSPRGKTVCLNNANIAL--RISWLNAIREWQEEFVGNMTSREFVDTITRDLLG 538
+ +G+ L+ A ++W+ + +WQ E EF++++ DL
Sbjct: 398 -----RYKEAKGRNGVLHPHAAAEIDDMAWMRQLLDWQREAA---DPGEFLESLRYDLAV 449
Query: 539 SRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEI 598
+FVFTP+G++ LP G+T VD+AY +HTE+G++ + A+VNG LV+ L N EVVE+
Sbjct: 450 QEIFVFTPKGDVITLPTGSTPVDFAYAVHTEVGHRCIGARVNGRLVALERKLENGEVVEV 509
Query: 599 ITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVADSG 657
T A ++ + + W + + A+ KI ++ ++ A E D + V G
Sbjct: 510 FTSKAPNAGPS----RDWQQFVVSPRAKTKIRQWFAKERREEALETGKDAMAREVRRGG 564
>sp|P43811|SPOT_HAEIN Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd) GN=spoT PE=3 SV=1
Length = 677
Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 274/534 (51%), Gaps = 93/534 (17%)
Query: 154 MLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIE 213
M+A +AH+GQ R SGEP+I HPV VA I+ +L LD E++ A LLHD +EDT T E+++
Sbjct: 1 MIARDAHEGQFRSSGEPYITHPVAVASIIAQLHLDHEAVMAALLHDVIEDTP-YTEEQLK 59
Query: 214 EEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLAD 273
EEFGA+V IV+G VSKL KLK + Q+ + ++ R+M LAMT ++RV+++KLAD
Sbjct: 60 EEFGASVAEIVDG---VSKLDKLKFRTR----QEAQVENFRKMILAMTRDIRVVLIKLAD 112
Query: 274 RLHNMRTLSHMPP------------------------HKQSELENLSFMYTNAEDYAKVK 309
R HNMRTL + P H ++ELE+LSF + Y +V
Sbjct: 113 RTHNMRTLGSLRPDKRRRIAKETLEIYCPLAHRLGIEHIKNELEDLSFQAMHPHRY-EVL 171
Query: 310 RRVADLYKEHEKEL-EEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRG 368
+++ D+ + + ++L E ++ + ++E+ + K Y IY+ +
Sbjct: 172 KKLVDVARSNRQDLIERISQEIKVRLENSGIF------ARVWGREKHLYKIYQKMRIKDQ 225
Query: 369 SINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKP 428
+ + I R+I+K CY VLG +H ++ P P +KDYIA PK
Sbjct: 226 EFHSIMDIYAFRVIVKNV------------DDCYRVLGQMHNLYKPRPGRVKDYIAVPKA 273
Query: 429 NGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGR 488
NGYQSL T++I +EV I TE+M+ +AE GI AH+ + NG+
Sbjct: 274 NGYQSLQTSMIG---PKGVPVEVHIHTEDMEQVAEMGITAHWV-----------YKENGK 319
Query: 489 SPRGKTVCLNNANIALRIS-WLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPR 547
+ ++ +R+ WL ++ E Q+ VGN S EF++ + + ++VFTP+
Sbjct: 320 N--------DSTTAQIRVQRWLQSLVEIQQS-VGN--SFEFIENVKSEFFPKEIYVFTPK 368
Query: 548 GEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSK 607
G I LP GAT VD+AY +H+++GN V V + L + + V IIT +
Sbjct: 369 GRIVELPMGATAVDFAYAVHSDVGNTCVGVTVEHKPYPLSKALESGQTVNIITDPNAHPE 428
Query: 608 SAFQRHKQWLEHAKTRSARHKIMKFLR---EQAALSASEITADT------VGDF 652
A WL T A+ +I +L+ E+ A+ E+ + +GDF
Sbjct: 429 VA------WLNFVVTARAKTRIRHYLKQRCEEDAVKLGEVELNVALQPHNLGDF 476
>sp|O87331|RELA_CORGL GTP pyrophosphokinase OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=relA PE=3 SV=2
Length = 760
Score = 244 bits (623), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/516 (30%), Positives = 268/516 (51%), Gaps = 79/516 (15%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
+++++ RA A HDG R+SG+P+I HP+ VA I E+ +D ++ A LLHDTVEDT
Sbjct: 51 DVQVLERAYDTAERLHDGVIRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDT 110
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+ + + + +FG V R+V+G TK+ K+ L E A+ +R+M +AM+++
Sbjct: 111 DY-SLDDLTRDFGEEVARLVDGVTKLDKVA-LGAAAE--------AETIRKMIVAMSQDP 160
Query: 265 RVIIVKLADRLHNMRTLSHMPPHKQS------------------------ELENLSFMYT 300
RV+++K+ADRLHNMRT+ +PP KQ+ ELE+LSF
Sbjct: 161 RVLVIKVADRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAIL 220
Query: 301 NAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEIRSVCKEPYSIY 360
+ Y ++ R VAD ++ L+E + + ++ + E+ K +SIY
Sbjct: 221 YPKKYEEIVRLVADRAPSRDRYLKEIIDQVTGGLRENN------IAAEVLGRPKHYWSIY 274
Query: 361 KAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMK 420
+ ++ +++ + +RI++ CY +G+VH ++ +P K
Sbjct: 275 QKMIVRGRDFDDIFDLVGIRILV------------DNVNNCYAAIGVVHSLFNALPGRFK 322
Query: 421 DYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLV 480
DYI+ P+ YQSLHTT+ + LEVQ RT +M AE GIAAH+
Sbjct: 323 DYISAPRFGVYQSLHTTV---MGPGGKPLEVQARTHDMHYNAEFGIAAHW---------- 369
Query: 481 GHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSR 540
+ S G+ ++ +++W+ + +WQ+E EF+D++ DL +
Sbjct: 370 -RYKETKGSHSGEQAEVD------QMAWMRQLLDWQKEAA---DPNEFLDSLRYDLTSKQ 419
Query: 541 VFVFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 600
+FVFTP+G++ NLP +T VD+AY +HTE+G++ + AK+NG LV+ L + + VE+ T
Sbjct: 420 IFVFTPKGDVVNLPVNSTPVDFAYAVHTEVGHRCIGAKINGKLVALETKLKSGDRVEVFT 479
Query: 601 YNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLREQ 636
++ + + W E + A+ KI ++ ++
Sbjct: 480 SKDQNAGPS----RGWQEFVVSPRAKAKIRQWFAKE 511
>sp|P0AG23|RELA_SHIFL GTP pyrophosphokinase OS=Shigella flexneri GN=relA PE=3 SV=1
Length = 744
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 237/489 (48%), Gaps = 77/489 (15%)
Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
VE+ IL L +D +++ A LL + D NVV+ + + E G +V ++ G ++ + +
Sbjct: 60 VEMVEILSTLSMDIDTLRAALLF-PLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQ 118
Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS----- 290
LK + + SV + D++R+M LAM ++ R +++KLA+R+ ++R + P ++
Sbjct: 119 LKATHTD-SVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKE 177
Query: 291 -------------------ELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 331
ELE+ F Y + +Y ++ + + + + E +EE L
Sbjct: 178 CTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLR 237
Query: 332 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 391
+++ + VK E+ K YSI++ + K + +E+ + +RI+
Sbjct: 238 AEMKAE------GVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIV--------- 282
Query: 392 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 451
Q CY LG+VH + +P DY+A PKPNGYQS+HT + L +E+
Sbjct: 283 ---AERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVV---LGPGGKTVEI 336
Query: 452 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 511
QIRT++M AE G+AAH+ + G + RI+WL
Sbjct: 337 QIRTKQMHEDAELGVAAHW-----------------KYKEGAAAGGARSGHEDRIAWLRK 379
Query: 512 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 571
+ WQEE S E +D + + RV+VFTP+G++ +LP G+T +D+AY IH+++G
Sbjct: 380 LIAWQEEMA---DSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVG 436
Query: 572 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARH 627
++ + AK+ G +V T+ L + +EIIT + + WL + T R
Sbjct: 437 HRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPS------RDWLNPNLGYVTTSRGRS 490
Query: 628 KIMKFLREQ 636
KI + R+Q
Sbjct: 491 KIHAWFRKQ 499
>sp|P0AG20|RELA_ECOLI GTP pyrophosphokinase OS=Escherichia coli (strain K12) GN=relA PE=1
SV=1
Length = 744
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 237/489 (48%), Gaps = 77/489 (15%)
Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
VE+ IL L +D +++ A LL + D NVV+ + + E G +V ++ G ++ + +
Sbjct: 60 VEMVEILSTLSMDIDTLRAALLF-PLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQ 118
Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS----- 290
LK + + SV + D++R+M LAM ++ R +++KLA+R+ ++R + P ++
Sbjct: 119 LKATHTD-SVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKE 177
Query: 291 -------------------ELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 331
ELE+ F Y + +Y ++ + + + + E +EE L
Sbjct: 178 CTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLR 237
Query: 332 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 391
+++ + VK E+ K YSI++ + K + +E+ + +RI+
Sbjct: 238 AEMKAE------GVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIV--------- 282
Query: 392 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 451
Q CY LG+VH + +P DY+A PKPNGYQS+HT + L +E+
Sbjct: 283 ---AERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVV---LGPGGKTVEI 336
Query: 452 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 511
QIRT++M AE G+AAH+ + G + RI+WL
Sbjct: 337 QIRTKQMHEDAELGVAAHW-----------------KYKEGAAAGGARSGHEDRIAWLRK 379
Query: 512 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 571
+ WQEE S E +D + + RV+VFTP+G++ +LP G+T +D+AY IH+++G
Sbjct: 380 LIAWQEEMA---DSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVG 436
Query: 572 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARH 627
++ + AK+ G +V T+ L + +EIIT + + WL + T R
Sbjct: 437 HRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPS------RDWLNPNLGYVTTSRGRS 490
Query: 628 KIMKFLREQ 636
KI + R+Q
Sbjct: 491 KIHAWFRKQ 499
>sp|P0AG21|RELA_ECOL6 GTP pyrophosphokinase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=relA PE=3 SV=1
Length = 744
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 237/489 (48%), Gaps = 77/489 (15%)
Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
VE+ IL L +D +++ A LL + D NVV+ + + E G +V ++ G ++ + +
Sbjct: 60 VEMVEILSTLSMDIDTLRAALLF-PLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQ 118
Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS----- 290
LK + + SV + D++R+M LAM ++ R +++KLA+R+ ++R + P ++
Sbjct: 119 LKATHTD-SVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKE 177
Query: 291 -------------------ELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 331
ELE+ F Y + +Y ++ + + + + E +EE L
Sbjct: 178 CTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLR 237
Query: 332 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 391
+++ + VK E+ K YSI++ + K + +E+ + +RI+
Sbjct: 238 AEMKAE------GVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIV--------- 282
Query: 392 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 451
Q CY LG+VH + +P DY+A PKPNGYQS+HT + L +E+
Sbjct: 283 ---AERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVV---LGPGGKTVEI 336
Query: 452 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 511
QIRT++M AE G+AAH+ + G + RI+WL
Sbjct: 337 QIRTKQMHEDAELGVAAHW-----------------KYKEGAAAGGARSGHEDRIAWLRK 379
Query: 512 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 571
+ WQEE S E +D + + RV+VFTP+G++ +LP G+T +D+AY IH+++G
Sbjct: 380 LIAWQEEMA---DSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVG 436
Query: 572 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARH 627
++ + AK+ G +V T+ L + +EIIT + + WL + T R
Sbjct: 437 HRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPS------RDWLNPNLGYVTTSRGRS 490
Query: 628 KIMKFLREQ 636
KI + R+Q
Sbjct: 491 KIHAWFRKQ 499
>sp|P0AG22|RELA_ECO57 GTP pyrophosphokinase OS=Escherichia coli O157:H7 GN=relA PE=3 SV=1
Length = 744
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 237/489 (48%), Gaps = 77/489 (15%)
Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
VE+ IL L +D +++ A LL + D NVV+ + + E G +V ++ G ++ + +
Sbjct: 60 VEMVEILSTLSMDIDTLRAALLF-PLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQ 118
Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS----- 290
LK + + SV + D++R+M LAM ++ R +++KLA+R+ ++R + P ++
Sbjct: 119 LKATHTD-SVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKE 177
Query: 291 -------------------ELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILM 331
ELE+ F Y + +Y ++ + + + + E +EE L
Sbjct: 178 CTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLR 237
Query: 332 KKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGV 391
+++ + VK E+ K YSI++ + K + +E+ + +RI+
Sbjct: 238 AEMKAE------GVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIV--------- 282
Query: 392 GPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEV 451
Q CY LG+VH + +P DY+A PKPNGYQS+HT + L +E+
Sbjct: 283 ---AERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVV---LGPGGKTVEI 336
Query: 452 QIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNA 511
QIRT++M AE G+AAH+ + G + RI+WL
Sbjct: 337 QIRTKQMHEDAELGVAAHW-----------------KYKEGAAAGGARSGHEDRIAWLRK 379
Query: 512 IREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEIG 571
+ WQEE S E +D + + RV+VFTP+G++ +LP G+T +D+AY IH+++G
Sbjct: 380 LIAWQEEMA---DSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVG 436
Query: 572 NKMVAAKVNGNLVSPTHVLANAEVVEIITYNALSSKSAFQRHKQWLE----HAKTRSARH 627
++ + AK+ G +V T+ L + +EIIT + + WL + T R
Sbjct: 437 HRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPS------RDWLNPNLGYVTTSRGRS 490
Query: 628 KIMKFLREQ 636
KI + R+Q
Sbjct: 491 KIHAWFRKQ 499
>sp|P55133|RELA_PHOAS GTP pyrophosphokinase OS=Photobacterium angustum (strain S14 / CCUG
15956) GN=relA PE=3 SV=1
Length = 744
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/477 (28%), Positives = 241/477 (50%), Gaps = 77/477 (16%)
Query: 150 RRALMLAFEAHDGQKRRSGEPFII-HPVEVARILGELELDWESIAAGLLHDTVEDTNVVT 208
+R + LA E +G P ++ E+ IL L +D +++ A LL+ VE T
Sbjct: 39 QRCIELAAEQENG-------PLLLWRGRELVEILVTLSMDADTLIAALLYPLVEGGCYST 91
Query: 209 FERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVII 268
+ ++EE+ T+ +V+G ++ + +LK E + Q + D++R+M L+M ++ R ++
Sbjct: 92 -DALKEEYSGTILHLVQGVEQMCAISQLKSTAEE-TAQAAQVDNIRRMLLSMVDDFRCVV 149
Query: 269 VKLADRLHNMRTLSHMPPH-KQSELENLSFMYT-------------NAEDYAKVKRRVAD 314
+KLA+R+ N+R + P +++ + + +Y EDYA + + D
Sbjct: 150 IKLAERICNLREVKDQPDEVRRAAAQECANIYAPLANRLGIGQLKWEIEDYA-FRYQHPD 208
Query: 315 LYKEHEKELEEANKILMKKIEDDQFL--------DLM---TVKTEIRSVCKEPYSIYKAV 363
YK+ K+L E ++I+ + ++ D M ++ E++ K YSI++ +
Sbjct: 209 TYKQIAKQLSE------RRIDREDYITHFVDDLSDAMKASNIRAEVQGRPKHIYSIWRKM 262
Query: 364 LKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYI 423
K +E+ + +RI+ Q CY LG+VH + +P+ DY+
Sbjct: 263 QKKSLEFDELFDVRAVRIV------------AEELQDCYAALGVVHTKYRHLPKEFDDYV 310
Query: 424 ATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHA 483
A PKPNGYQS+HT ++ ++ +E+QIRT++M +E G+AAH+ +
Sbjct: 311 ANPKPNGYQSIHTVVLGPEGKT---IEIQIRTKQMHEESELGVAAHWKYK---------- 357
Query: 484 RPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFVDTITRDLLGSRVFV 543
G + G + +I+WL + WQEE S E +D + + RV+
Sbjct: 358 --EGTASGGAQSAYDE-----KINWLRKLLAWQEEM---SDSGEMLDELRSQVFDDRVYA 407
Query: 544 FTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 600
FTP+G++ +LP AT +D+AY IH+E+G++ + AKV G +V T+ L + VEIIT
Sbjct: 408 FTPKGDVVDLPSNATPLDFAYHIHSEVGHRCIGAKVEGRIVPFTYHLQMGDQVEIIT 464
>sp|P44644|RELA_HAEIN GTP pyrophosphokinase OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=relA PE=3 SV=1
Length = 743
Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 140/487 (28%), Positives = 240/487 (49%), Gaps = 76/487 (15%)
Query: 176 VEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGK 235
VE+ IL EL +D E++ +L V + + +E ++E+FGA + ++++G ++ + +
Sbjct: 63 VEMVEILHELNMDAETLLTAMLFPIVAN-KLTDWESLKEKFGAKITKLLKGVLEMDNIRQ 121
Query: 236 LKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQS----- 290
L N +HS ++ D++R+M LAM ++ R +I+KLA+R+ +R H +
Sbjct: 122 L---NASHSANALQVDNVRRMLLAMVDDFRCVIIKLAERITFLRDAEHRCAEEDKVLAVK 178
Query: 291 --------------------ELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKIL 330
ELE+ F Y + E Y R +A L +E + L+ + I
Sbjct: 179 ECSYIYAPLANRLGIGQLKWELEDYCFRYLHPEQY----RAIAKLLQE--RRLDREHYIA 232
Query: 331 MKKIEDDQFLDLMTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSG 390
E +L + E+ K YSI++ + K + + + +RII++
Sbjct: 233 DFVSELSGYLRENIEQVEVYGRPKHIYSIWRKMQKKHLEFSGLYDVRAVRIIVQK----- 287
Query: 391 VGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLE 450
Q CY LG+VH + +P+ DY+A PKPNGYQS+HT + L + +E
Sbjct: 288 -------LQDCYTALGIVHTQFKHLPKEFDDYVANPKPNGYQSIHTVV---LGKGGKPIE 337
Query: 451 VQIRTEEMDLIAERGIAAHYSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLN 510
VQIRT++M AE G+AAH+ + TG + +I+WL
Sbjct: 338 VQIRTQQMHDDAELGMAAHWKYKEGNTGSMSAYEE-------------------KIAWLR 378
Query: 511 AIREWQEEFVGNMTSREFVDTITRDLLGSRVFVFTPRGEIKNLPKGATVVDYAYMIHTEI 570
+ WQ++ S E + + + RV+VFTP+GE+ +LP G+T +D+AY IH+EI
Sbjct: 379 KLLAWQDDIT---DSGEVLAELRSQVFDDRVYVFTPKGEVVDLPTGSTPLDFAYAIHSEI 435
Query: 571 GNKMVAAKVNGNLVSPTHVLANAEVVEIITY-NALSSKSAFQRHKQWLEHAKTRSARHKI 629
G++ + AKV G +V T+ L + ++IIT N S+ + + AK+R+ KI
Sbjct: 436 GHRCIGAKVAGRIVPFTYQLQMGDQIDIITQKNPNPSRDWLNPNLGFTHTAKSRA---KI 492
Query: 630 MKFLREQ 636
+ ++Q
Sbjct: 493 QAWFKKQ 499
>sp|P75386|SPOT_MYCPN Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129)
GN=spoT PE=3 SV=1
Length = 733
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 139/539 (25%), Positives = 248/539 (46%), Gaps = 86/539 (15%)
Query: 134 LRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIA 193
L+ T +P + L+ +AL + + H QKR SGEPF IHP+ A L E +D ++
Sbjct: 25 LQKTAQKFAPEVVALITKALDYSKKWHGEQKRLSGEPFFIHPLRTALRLVEWNMDSNTVC 84
Query: 194 AGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDL 253
AGLLHD +EDT VT + FG + +V TK++ K K + N +D+ L
Sbjct: 85 AGLLHDIIEDTQ-VTEADLTAIFGKEITDLVVKVTKITSESK-KQRQLNRKKEDLNLKSL 142
Query: 254 RQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQ------------------------ 289
+ ++ +EV +++KLADRL N+ ++ + KQ
Sbjct: 143 VNIAMSSQQEVNALVLKLADRLDNISSIEFLAVEKQKIIAKETLELYAKIAGRIGMYPVK 202
Query: 290 SELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDDQFLDLMTVKTEI 349
++L +LSF + +++ ++ ++ E K L + +E +Q ++ +
Sbjct: 203 TQLADLSFKVLDPKNFNNTLSKINQQKVFYDNEWGNFKKQLEEMLEQNQ------IEYRL 256
Query: 350 RSVCKEPYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVH 409
S K YS Y+ + +I +++ + +R+I+K + CYH+LGL+H
Sbjct: 257 ESRIKGIYSTYQKLTFHEQNIAKIHDLFAIRLIVKSELD------------CYHLLGLIH 304
Query: 410 GIWTPIPRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAH 469
+T + + KDYIA+PK N YQS+HTT + +E+QIRT+ MD +++ G A+H
Sbjct: 305 LNFTVLMKHFKDYIASPKQNFYQSIHTT----VRLKGLNVEIQIRTQRMDHVSKYGFASH 360
Query: 470 YSGRVFVTGLVGHARPNGRSPRGKTVCLNNANIALRISWLNAIREWQEEFVGNMTSREFV 529
+ + GL+ AL++++LN+ M SR+F
Sbjct: 361 WIYKEKKEGLLAS--------------------ALQVNYLNS---------KQMHSRDFF 391
Query: 530 DTIT-RDLLGSRVFVFTPRGEIK--NLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSP 586
I D++ V +K N+ + ++D AY ++ + NK+ K++G V
Sbjct: 392 KRIFGTDIIKVNVSSDNEPNIVKKLNVESNSKLLDIAYELYPKQFNKLEKIKLDGVEVMS 451
Query: 587 THVLANAEVVEIITYNALSSKSAFQRHKQWLEHAKTRSARHKIMKFLRE-QAALSASEI 644
V A E+V + ++ ++WL + R ++ K L + + A+ SE+
Sbjct: 452 FDVTAENEMVIEFCFGKTNNLK-----RRWLRYMNNHVFRERVKKDLNKLKKAVKYSEL 505
>sp|P47520|SPOT_MYCGE Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 /
NCTC 10195) GN=spoT PE=3 SV=1
Length = 720
Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 185/368 (50%), Gaps = 58/368 (15%)
Query: 145 ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
E+EL+ +A A H+ QKR SGEPF IHP+ A L E +D +I AGLLHD +EDT
Sbjct: 23 EIELINKAFYHAKTWHENQKRLSGEPFFIHPLRTALSLVEWNMDPITICAGLLHDIIEDT 82
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGK----LKCKNENHSVQDVKADDLRQMFLAM 260
+ T I F + +V TK++ K LK K EN +++ + +
Sbjct: 83 D-QTEANIAMIFSKEIAELVTKVTKITNESKKQRHLKNKKENLNLK-----SFVNIAINS 136
Query: 261 TEEVRVIIVKLADRLHNMRTLSHMPPHKQSELENLSFMYTNAEDYAK---------VKRR 311
+E+ V+++KLADRL N+ ++ +P KQ + + E YAK VK +
Sbjct: 137 QQEINVMVLKLADRLDNIASIEFLPIEKQKVIAKETL-----ELYAKIAGRIGMYPVKTK 191
Query: 312 VADL------YKEHEKELEEANKILMKKIEDDQF----------LDLMTVKTEIRSVCKE 355
+ADL K ++ L + NK K D+++ L ++ ++ S K
Sbjct: 192 LADLSFKVLDLKNYDNTLSKINK--QKVFYDNEWDNFKQQLKKILAQNQIEYQLESRIKG 249
Query: 356 PYSIYKAVLKSRGSINEVNQIAQLRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPI 415
YS YK + +I++++ + +R+I K + CYH+LGL+H +
Sbjct: 250 IYSTYKKLTVHEQNISKIHDLFAIRLITKSELD------------CYHILGLIHLNFLID 297
Query: 416 PRAMKDYIATPKPNGYQSLHTTLIPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRVF 475
+ KDYIA+PK N YQS+HTT + +E+QIRT++MD +++ G+A+H+ +
Sbjct: 298 SKYFKDYIASPKQNLYQSIHTT----VRLKGLNVEIQIRTQQMDNVSKFGLASHWIYKEQ 353
Query: 476 VTGLVGHA 483
GL+ A
Sbjct: 354 KEGLLAPA 361
>sp|Q568P1|MESH1_DANRE Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
OS=Danio rerio GN=hddc3 PE=2 SV=1
Length = 180
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 75/137 (54%), Gaps = 20/137 (14%)
Query: 155 LAFEAHDGQKRRS--GEPFIIHPVEVARIL---GELELDWESIAAGLLHDTVEDTNVVTF 209
A E H Q+ + G P+I HP+ VARIL GE+ D E I A LLHDTVEDT+ TF
Sbjct: 15 FAAEKHRNQRHKDPEGTPYINHPIGVARILSHEGEI-TDVEVIQAALLHDTVEDTDT-TF 72
Query: 210 ERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIV 269
E +E FGATV RIV+G T L K + + + Q+ A + +V
Sbjct: 73 EELESVFGATVARIVQGVTDDKSLPKAERERQ-------------QVEHAPHCSHQAKLV 119
Query: 270 KLADRLHNMRTLSHMPP 286
KLAD+L+N+R L+ P
Sbjct: 120 KLADKLYNLRDLNRCTP 136
>sp|Q28C98|MESH1_XENTR Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
OS=Xenopus tropicalis GN=hddc3 PE=2 SV=1
Length = 179
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
Query: 148 LVRRALMLAFEAHDGQKRRSGE--PFIIHPVEVARILGELE--LDWESIAAGLLHDTVED 203
L+ A A E H Q+R+ E P+I HP+ VARIL D + A LLHDTVED
Sbjct: 7 LILEAANFAAEKHKQQRRKDPEKTPYINHPLGVARILSHEGGITDTAVLQAALLHDTVED 66
Query: 204 TNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEE 263
TN TFE IE FG VR IVE T L K++ K QM A
Sbjct: 67 TNT-TFEEIELHFGQDVRNIVEEVTDDKTLPKMERKR-------------LQMEHAPHCS 112
Query: 264 VRVIIVKLADRLHNMRTLSHMPPHKQSE 291
+ +VKLAD+L+N+R L P SE
Sbjct: 113 QKAKLVKLADKLYNLRDLKRCTPEGWSE 140
>sp|Q8N4P3|MESH1_HUMAN Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
OS=Homo sapiens GN=HDDC3 PE=1 SV=3
Length = 179
Score = 74.3 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 63/183 (34%), Positives = 87/183 (47%), Gaps = 26/183 (14%)
Query: 155 LAFEAHDGQKRR--SGEPFIIHPVEVARILGELE--LDWESIAAGLLHDTVEDTNVVTFE 210
A H Q+R+ G P+I HP+ VARIL D + A LLHDTVEDT+ T +
Sbjct: 14 FAARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDT-TLD 72
Query: 211 RIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVK 270
+E FGA VRR+VE T L KL+ K Q+ A +VK
Sbjct: 73 EVELHFGAQVRRLVEEVTDDKTLPKLERKR-------------LQVEQAPHSSPGAKLVK 119
Query: 271 LADRLHNMRTLSHMPPHKQSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKIL 330
LAD+L+N+R L+ P SE ++Y + +V + ++LEEA K L
Sbjct: 120 LADKLYNLRDLNRCTPEGWSE--------HRVQEYFEWAAQVVKGLQGTNRQLEEALKHL 171
Query: 331 MKK 333
K+
Sbjct: 172 FKQ 174
>sp|Q9D114|MESH1_MOUSE Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
OS=Mus musculus GN=Hddc3 PE=2 SV=1
Length = 179
Score = 73.6 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 62/183 (33%), Positives = 89/183 (48%), Gaps = 28/183 (15%)
Query: 157 FEAHDGQKRR----SGEPFIIHPVEVARILGELE--LDWESIAAGLLHDTVEDTNVVTFE 210
F AH +++R G P+I HP+ VARIL D + A LLHDTVEDT+ T +
Sbjct: 14 FAAHKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDT-TLD 72
Query: 211 RIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVK 270
+E FGA VRR+VE T L KL+ K + Q+ A +VK
Sbjct: 73 EVELHFGAQVRRLVEEVTDDKTLPKLERKRQ-------------QVEQAPHSSPGAKLVK 119
Query: 271 LADRLHNMRTLSHMPPHKQSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKIL 330
LAD+L+N+R L+ P SE ++Y + +V + ++LEEA K L
Sbjct: 120 LADKLYNLRDLNRCTPTGWSE--------HRVQEYFEWAAQVVKGLQGTNQQLEEALKQL 171
Query: 331 MKK 333
++
Sbjct: 172 FEE 174
>sp|P29941|YCB8_PSEDE Uncharacterized 19.2 kDa protein in cobO 3'region OS=Pseudomonas
denitrificans PE=4 SV=1
Length = 175
Score = 67.8 bits (164), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/133 (36%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 146 LELVRRALMLAFEAHDGQKRR-SGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDT 204
++L AL A AH QKR+ G P+I+HP+ VA I+ + E IAA LLHDTVEDT
Sbjct: 11 IDLENSALQFATRAHGEQKRKYDGRPYIVHPIAVAEIVRSVPHTPEMIAAALLHDTVEDT 70
Query: 205 NVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEV 264
+ E I+E FG V +V T +S H + V+ + RQ +
Sbjct: 71 DATLLE-IKEAFGPKVATLVAWLTDIS--------TPFHGNRQVRKELDRQHLASAPAAA 121
Query: 265 RVIIVKLADRLHN 277
+ VKLAD + N
Sbjct: 122 KT--VKLADLIDN 132
>sp|Q4UMH6|Y381_RICFE Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=RF_0381 PE=4 SV=1
Length = 1179
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 136/336 (40%), Gaps = 76/336 (22%)
Query: 174 HPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKL 233
+P ++ I L+LD S A LLH+ ++ N+ E++ I+ ++KL
Sbjct: 29 YPDQIHTITKALQLDSSSFTAVLLHENIQHLNL-------EDYNHFNNNIIYLVDVINKL 81
Query: 234 GKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPP--HKQSE 291
+ K + ++ E +++ + +L L+ + P HK S
Sbjct: 82 STIHYK------------PYAEQYIHFHE----LLLTINPKLQETAILTSLVPLLHKVS- 124
Query: 292 LENLSFMYTNAEDYAKVKRR--VADL--YKEHE------KEL-------EEANKIL---- 330
+ NL + TNA+ +++ + L Y H ++L EE N+IL
Sbjct: 125 IFNLEYNNTNAQHISEIITNCYIPYLLSYTAHNDLAYLLQDLCFKIQYPEERNRILHYMY 184
Query: 331 ---------MKKIEDDQFLDL---MTVKTEIRSVCKEPYSIYKAVLKSRGSINEVNQIAQ 378
+ IE QF ++ + +K + K PYSI+ L I +N I
Sbjct: 185 WLYPDIDNIIHNIEQ-QFGNIFRKLNIKASLSYRIKSPYSIWIKTLVKDIHITALNDILA 243
Query: 379 LRIIIKPKPCSGVGPLCSPQQICYHVLGLVHGIWTPIPRAMKDYIATPKPNGYQSLHTTL 438
R I+ K CY V L+H + I DYI PK NGYQS+H +
Sbjct: 244 FRAIVPNKKA------------CYDVSKLIHLHYNTITSQFVDYIRYPKNNGYQSIHLVI 291
Query: 439 IPFLYESMFRLEVQIRTEEMDLIAERGIAAHYSGRV 474
+ +E+QIR+ M + G +AH++ +V
Sbjct: 292 SG---GNKGNIELQIRSTTMHRQTQYG-SAHHTYKV 323
>sp|Q9VAM9|MESH1_DROME Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
OS=Drosophila melanogaster GN=Mesh1 PE=1 SV=1
Length = 179
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 18/138 (13%)
Query: 153 LMLAFEAHDGQKRRSGE--PFIIHPVEVARILG--ELELDWESIAAGLLHDTVEDTNVVT 208
L A H Q+R+ + P++ H + V+ IL D + A LLHD VEDT+ +
Sbjct: 13 LQYAAFKHRQQRRKDPQETPYVNHVINVSTILSVEACITDEGVLMAALLHDVVEDTDA-S 71
Query: 209 FERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVII 268
FE +E+ FG V +V T L K + K Q+ A R +
Sbjct: 72 FEDVEKLFGPDVCGLVREVTDDKSLEKQERKR-------------LQIENAAKSSCRAKL 118
Query: 269 VKLADRLHNMRTLSHMPP 286
+KLAD+L N+R L P
Sbjct: 119 IKLADKLDNLRDLQVNTP 136
>sp|B5EBX9|SYT_GEOBB Threonine--tRNA ligase OS=Geobacter bemidjiensis (strain Bem / ATCC
BAA-1014 / DSM 16622) GN=thrS PE=3 SV=1
Length = 636
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 543 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 600
V P G + LP GA++ D A I + +A K++GNLV LA+ VEIIT
Sbjct: 6 VTLPDGSQRPLPAGASIFDLAASIGAGLAKAAIAGKIDGNLVDLNTPLADGARVEIIT 63
>sp|Q03RK3|SYT_LACBA Threonine--tRNA ligase OS=Lactobacillus brevis (strain ATCC 367 /
JCM 1170) GN=thrS PE=3 SV=1
Length = 647
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Query: 546 PRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIITYNALS 605
P G +K P G T D A I + K VAAK++G LV LA+ +EI+T ++
Sbjct: 9 PDGAVKAFPAGTTPADVAKSISISLAKKAVAAKLDGQLVDYLTPLASDGSIEIVTKDSDD 68
Query: 606 SKSAFQRHKQWLEHAKTRSARHKIMKFLREQAALSASEITADTVGDFVADSGEESEV 662
+ + T +A +I +E A+ +++AD G FV ++ +V
Sbjct: 69 GLTVLR---------NTTAALLRI-ALKKEFPAIRLGKVSADEDGFFVDTDKDDQQV 115
>sp|C6DYJ5|SYT_GEOSM Threonine--tRNA ligase OS=Geobacter sp. (strain M21) GN=thrS PE=3
SV=1
Length = 636
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 543 VFTPRGEIKNLPKGATVVDYAYMIHTEIGNKMVAAKVNGNLVSPTHVLANAEVVEIIT 600
V P G + LP GA++ D A I + +A K++GNLV LA+ VEI+T
Sbjct: 6 VTLPDGSQRPLPAGASIFDLAASIGAGLAKAAIAGKIDGNLVDLNTPLADGARVEIVT 63
>sp|P39583|YWAC_BACSU GTP pyrophosphokinase YwaC OS=Bacillus subtilis (strain 168)
GN=ywaC PE=1 SV=1
Length = 210
Score = 42.4 bits (98), Expect = 0.017, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 419 MKDYIATPKPNGYQSLHTTL-IPFLYES---MFRLEVQIRTEEMDLIA 462
+KDYI TPKPNGY+SLH + +P + + E+QIRT MD A
Sbjct: 119 VKDYIQTPKPNGYRSLHLIIEMPVNLTNRVEYVKAEIQIRTIAMDFWA 166
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 313,939,514
Number of Sequences: 539616
Number of extensions: 13102438
Number of successful extensions: 36269
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 35815
Number of HSP's gapped (non-prelim): 247
length of query: 861
length of database: 191,569,459
effective HSP length: 126
effective length of query: 735
effective length of database: 123,577,843
effective search space: 90829714605
effective search space used: 90829714605
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)