Citrus Sinensis ID: 002990

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860

MASFPTETLNLPPPINGQDSTSHNEPLQNADDEQIQPSIPQSTDDVTTTAAEKRKREDVATEGPQSESAEPSPSPSLHPLHKTSLCSYFRKVGTCCHGSTCRYAHGEEELRIRPDNTWDPTSERAKKARKLEDGDKCEAKEDAVEEVMMTEAVVDGDGDGDQDVELSKCLVHLPRKWHSDNLKKFLADHGILYKSAKKKKGMTVGFVKFESVEQLKNAVEELEGISIGNKTLKVANVVPRSFDKNIKSPMTLSGNAKQASESAVPGELAEAHASSNGHEDGNGNDEGLAGDGSGLKVKSARDVVTPLAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILGSPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSSATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPKADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLLKDYLNPLREEDEHASEGSNKEITIAEEKDSSRDNVPENEGCSGQDPENDIADSNCPEGSGKEPQSQLQKDCTSEGNSLAQPFKNVVAIVDPPRGGLHPTVIKILRTHARLQRLVYISCNPETLVANAIELCTPSPDKIEKNKDNRGWRNMSSAGLARHRAKSMPISKPFQPVKAMAVDLFPHTSHCEMVMLLER

ccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccHHHHHHHHHccccccccccccccccccEEEEcccccccHHHHHHHHHHcccccccEEcccccCEEEEEEccHHHHHHHHHHHHcccccccCEEEEEcccccccccccccccccccccccccccccccEEEEEEEEccccccEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHcccccccccccccccccccccccccCEEEECccccccEEEEEECccccccCEEEEcccccccccHHHHHHHHHHHHHHHHccccccccccccEEEEEEEEEEccccccccccccccccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccccccccccccEEEccccccccccccccccccccEEEEcccCEEEEcccccccccHHHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHHHcccccEEEcccHHHHHHHHHHHHccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccHHHHHHHHHccccccEEEEcccHHHHHHHHHHHcccccccccccccccccccccccHHHHccccccccccccccCEEEEcccccccccEEEEEEEEc

********************************************************************************HKTSLCSYFRKVGTC**GSTCR**********************************************************DQDVELSKCLVHLPRKWHSDNLKKFLADHGILYKSAKKKKGMTVGFVKFESVEQLKNAVEELEGISIGNKTLKVANVVPRSF****************ASESAVPGELAEAHASSNGHEDGNGNDEGL*******KVKSARDVVTPLAHMSYSVQLEHKKNSIAQMLKKLTRNARKACPNGVSLPEWIMKSREIGGLPCKLEGILGSPLVNGYRNKCEFSVGYSLQAKPTVGFMLGNFREGVTAVEEPVDCPNVSEIACKYASIFQEFLQQSDLPVWNRFKNSGFWRQLTVREGRSPGKPLDVENLEVNISEVNISEVMLIAQVSSATFDDAVVNSEFERLAKAFAAGATASSPSLPLTALVIQDHQGVSNVAPADAPLRLLSIPKADGEPEESNDVVEARIHDSISNLRFCISPTAFFQVNTLAAEKLYSLGGDWADLGPDTLLFDVCCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINGIKNCRFVCAKAEDVMGSLLKDYLNPLREEDEHASEGSNKEITIAEEKDSSRDNVPENEGCSGQDPENDIADSNCPE*****************GNSLAQPFKNVVAIVDPPRGGLHPTVIKILRTHARLQRLVYISCNPETLVANAIELCTPSPDKIEKNKDN*GWRNMSSAGLARHRAKSMPISKPFQPVKAMAVDLFPHTSHCEMVMLLER

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Zinc finger CCCH domain-containing protein 24		probable	Q8L7S3

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1UWV, chain A
Confidence level:very confident
Coverage over the Query: 301-334,361-456,476-505,518-541,556-670,741-798,833-860
View the alignment between query and template
View the model in PyMOL

Template: 2JJQ, chain A
Confidence level:very confident
Coverage over the Query: 304-332,357-457,476-535,552-663,746-797,835-859
View the alignment between query and template
View the model in PyMOL

Template: 3BT7, chain A
Confidence level:very confident
Coverage over the Query: 301-332,345,360-455,475-536,552-670,698-699,721-733,746-798,834-860
View the alignment between query and template
View the model in PyMOL

Template: 2ERR, chain A
Confidence level:confident
Coverage over the Query: 161-241
View the alignment between query and template
View the model in PyMOL

Template: 1M9O, chain A
Confidence level:confident
Coverage over the Query: 75-114
View the alignment between query and template
View the model in PyMOL

Template: 3U1L, chain A
Confidence level:confident
Coverage over the Query: 84-107,120-238
View the alignment between query and template
View the model in PyMOL