Query 002992
Match_columns 860
No_of_seqs 236 out of 827
Neff 6.9
Searched_HMMs 13730
Date Mon Mar 25 09:19:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002992.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/002992hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2qtva3 c.62.1.2 (A:120-390) S 100.0 4.5E-45 3.3E-49 390.2 25.9 234 273-516 2-271 (271)
2 d1pd0a3 c.62.1.2 (A:301-552) S 100.0 2.3E-41 1.6E-45 357.6 14.1 231 272-518 2-252 (252)
3 d2qtva1 a.71.2.1 (A:524-626) S 99.9 4.7E-26 3.4E-30 200.3 11.7 101 624-726 1-103 (103)
4 d1pd0a2 b.2.8.1 (A:133-215,A:5 99.8 2E-21 1.4E-25 189.9 11.6 97 516-623 81-177 (177)
5 d1pd0a1 a.71.2.1 (A:647-753) S 99.8 1.2E-20 8.9E-25 171.6 12.0 102 624-726 1-107 (107)
6 d1pd0a5 g.41.10.1 (A:216-300) 99.8 1.6E-21 1.2E-25 169.6 3.9 73 188-260 5-81 (85)
7 d2qtva5 g.41.10.1 (A:45-119) S 99.8 2.6E-21 1.9E-25 163.2 4.0 70 188-259 2-73 (75)
8 d2qtva4 d.109.2.1 (A:627-768) 99.8 7.1E-20 5.2E-24 170.0 7.5 95 727-821 1-106 (142)
9 d2qtva2 b.2.8.1 (A:2-44,A:391- 99.7 3.8E-17 2.8E-21 156.9 11.9 105 518-622 51-175 (176)
10 d1pd0a4 d.109.2.1 (A:754-926) 98.4 1.7E-07 1.2E-11 91.1 6.2 90 744-837 37-150 (173)
11 d1pd0a2 b.2.8.1 (A:133-215,A:5 98.3 7.6E-08 5.5E-12 92.9 2.5 58 141-201 38-96 (177)
12 d1shux_ c.62.1.1 (X:) Capillar 98.3 8.6E-06 6.3E-10 78.6 16.7 157 275-503 7-167 (181)
13 d1atza_ c.62.1.1 (A:) von Will 98.2 2.4E-05 1.8E-09 75.9 17.8 159 275-504 4-169 (184)
14 d1n3ya_ c.62.1.1 (A:) Integrin 98.2 1E-05 7.5E-10 78.6 14.3 162 276-504 5-174 (189)
15 d1q0pa_ c.62.1.1 (A:) Compleme 98.1 9.8E-06 7.1E-10 79.7 13.8 180 276-504 4-193 (209)
16 d1v7pc_ c.62.1.1 (C:) Integrin 98.0 3.2E-05 2.4E-09 75.3 14.8 161 276-504 4-178 (193)
17 d1ijba_ c.62.1.1 (A:) von Will 98.0 8.8E-05 6.4E-09 72.8 17.6 171 276-514 16-195 (202)
18 d2qtva2 b.2.8.1 (A:2-44,A:391- 98.0 7.1E-07 5.2E-11 84.9 1.5 40 148-187 6-45 (176)
19 d1pt6a_ c.62.1.1 (A:) Integrin 97.9 5.9E-05 4.3E-09 73.3 14.6 161 276-504 4-178 (192)
20 d1mf7a_ c.62.1.1 (A:) Integrin 97.7 0.00013 9.2E-09 71.0 12.0 162 275-504 7-177 (194)
21 d1jeya2 c.62.1.3 (A:34-253) Ku 97.6 0.0006 4.4E-08 66.9 16.5 165 275-483 4-181 (220)
22 d2fh1a3 d.109.1.1 (A:629-741) 97.6 3.8E-05 2.8E-09 68.7 6.6 78 726-809 11-97 (113)
23 d1svya_ d.109.1.1 (A:) Severin 97.6 0.00015 1.1E-08 63.5 9.8 70 726-801 3-74 (102)
24 d1jeyb2 c.62.1.4 (B:6-241) Ku8 97.4 0.00036 2.6E-08 69.2 11.9 149 274-476 3-162 (236)
25 d1mjna_ c.62.1.1 (A:) Integrin 97.3 0.0015 1.1E-07 62.4 14.7 153 276-504 5-167 (179)
26 d1j72a2 d.109.1.1 (A:125-240) 97.2 0.00052 3.8E-08 61.3 9.0 76 727-808 12-90 (116)
27 d1kcqa_ d.109.1.1 (A:) Gelsoli 97.1 0.0009 6.5E-08 58.5 9.6 74 728-807 4-80 (104)
28 d2fh1a2 d.109.1.1 (A:533-628) 97.0 0.00077 5.6E-08 58.1 7.4 47 726-772 3-53 (96)
29 d1j72a3 d.109.1.1 (A:241-347) 96.6 0.0049 3.6E-07 53.8 10.4 78 726-809 7-95 (107)
30 d1d0na3 d.109.1.1 (A:263-383) 96.3 0.0041 3E-07 55.6 8.0 77 727-809 9-96 (121)
31 d1tyeb2 c.62.1.1 (B:107-354) I 95.6 0.017 1.3E-06 57.9 9.6 192 276-498 8-225 (248)
32 d1yvra2 c.62.1.5 (A:364-537) 6 94.6 0.029 2.1E-06 52.5 7.3 46 274-319 6-57 (174)
33 d2j9ub1 g.41.11.1 (B:115-161) 74.6 0.41 3E-05 34.1 0.8 20 216-235 2-21 (47)
34 d1y0ja1 g.39.1.1 (A:200-238) E 56.7 2 0.00015 29.7 1.4 30 195-225 2-31 (39)
35 d2gmga1 a.4.5.82 (A:1-105) Hyp 44.3 3.2 0.00023 35.0 1.0 36 194-234 66-101 (105)
36 d6rxna_ g.41.5.1 (A:) Rubredox 39.2 2.2 0.00016 30.5 -0.7 29 197-225 5-37 (45)
37 d1brfa_ g.41.5.1 (A:) Rubredox 33.7 3.1 0.00022 30.8 -0.7 11 215-225 33-43 (53)
38 d1yuza2 g.41.5.1 (A:167-202) N 32.4 8.2 0.00059 26.1 1.4 13 214-226 2-14 (36)
39 d2vuti1 g.39.1.1 (I:671-712) E 32.1 5.5 0.0004 27.9 0.5 29 197-226 2-30 (42)
40 d2akla2 g.41.3.5 (A:3-40) Hypo 30.0 15 0.0011 25.0 2.4 27 195-226 3-29 (38)
41 d2avue1 e.64.1.1 (E:5-160) Fla 29.5 5.2 0.00038 36.2 -0.1 27 194-223 129-156 (156)
42 d2dsxa1 g.41.5.1 (A:1-52) Rubr 28.5 4.2 0.00031 29.9 -0.7 11 215-225 34-44 (52)
43 d1zbdb_ g.50.1.1 (B:) Effector 27.1 9.6 0.0007 32.8 1.3 32 196-227 66-101 (124)
44 d1iroa_ g.41.5.1 (A:) Rubredox 26.6 4.8 0.00035 29.7 -0.7 10 216-225 35-44 (53)
45 d3gata_ g.39.1.1 (A:) Erythroi 25.1 9.2 0.00067 29.4 0.7 29 196-225 5-33 (66)
46 d1nnqa2 g.41.5.1 (A:135-171) R 24.3 12 0.0009 25.3 1.1 13 215-227 3-15 (37)
47 d1s24a_ g.41.5.1 (A:) Two-iron 23.3 5.3 0.00039 29.8 -1.0 10 216-225 3-12 (56)
48 d1ibia1 g.39.1.3 (A:117-144) C 21.7 24 0.0017 22.0 2.0 22 197-218 3-24 (28)
49 d1dx8a_ g.41.5.1 (A:) Rubredox 20.7 8.9 0.00065 29.8 -0.2 11 215-225 38-48 (70)
No 1
>d2qtva3 c.62.1.2 (A:120-390) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=4.5e-45 Score=390.18 Aligned_cols=234 Identities=25% Similarity=0.429 Sum_probs=210.5
Q ss_pred CCcEEEEEECCCChhHHHHHHHHHHHhhhcCCCCcEEEEEEECCeEEEEecCCCCceeeecccCCCCCCHHHHHHHhhc-
Q 002992 273 SAPIILVIDECLDEPHLQHLQSSLHAFVESIPPTARIGIILYGRTVSVYDFSEDSIASSDVLAGDKLPTEDSLKALLYG- 351 (860)
Q Consensus 273 ~p~~vFvID~S~~~~~l~~l~~sL~~~L~~Lp~~~~VGlITFd~~V~vy~l~~~~~~~~~V~~g~~~p~~~~l~~l~~~- 351 (860)
||.||||||+|.++++++.++++|+++|+.||++++|||||||++||||+++.....+.+|++|.++++.+++++++..
T Consensus 2 Pp~yvFvIDvs~~a~~~~~l~~~l~~~l~~lp~~~~VgiITfd~~v~~y~l~~~~~~~~~v~~g~~~~~~~~~~~~~~~~ 81 (271)
T d2qtva3 2 PPIFFFVVDLTSETENLDSLKESIITSLSLLPPNALIGLITYGNVVQLHDLSSETIDRCNVFRGDREYQLEALTEMLTGQ 81 (271)
T ss_dssp CCEEEEEEECCSCHHHHHHHHHHHHHHHTTSCTTCEEEEEEESSEEEEEECSCSSCCEEEEEESSSCCCHHHHHHHHHCC
T ss_pred CCEEEEEEECCccHHHHHHHHHHHHHHHHhCCCCCEEEEEEECCEEEEEECCCCcCccceeccCccccCHHHHHHHhhcc
Confidence 6889999999999999999999999999999999999999999999999999888889999999999999998876531
Q ss_pred -----------------------CCccccchhhhHHHHHHHHhhhccCccccccCCCC-CchHHHHHHHHHHhcCCCccc
Q 002992 352 -----------------------TGVYLSPMHASKQVAHDIFSSLRPYKLNITEASRD-RCLGTAVEVALAIIQGPSAEM 407 (860)
Q Consensus 352 -----------------------~~~fL~pl~e~~~~i~~lL~~L~~~~~~~~~~~r~-r~~G~AL~~A~~lL~~~~~~~ 407 (860)
.+.||+|++||++.|+++|++|+++.|....++++ ||+|+||++|..+|+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~e~~~~i~~lL~~L~~~~~~~~~~~~~~~~~G~Al~~A~~ll~~~~~-- 159 (271)
T d2qtva3 82 KPTGPGGAASHLPNAMNKVTPFSLNRFFLPLEQVEFKLNQLLENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYK-- 159 (271)
T ss_dssp C-----------------CCTTCGGGGSEEHHHHHHHHHHHHHHCCCCCCCCCTTBCCCCCHHHHHHHHHHHHHHHCT--
T ss_pred ccccccccccccccccccccCCccccccccHHHHHHHHHHHHHHhccCcccCCCCCCcccchHHHHHHHHHHHHhhcc--
Confidence 25789999999999999999999988876666666 9999999999999985321
Q ss_pred ccccccCCCCCcEEEEEeCCCCCCCCCCccCCCCCCCchh----------hhHhHHHHHHHHHHHHHhCCcEEEEEeecC
Q 002992 408 SRGVVKRPGGNSRIIVCAGGPNTYGPGSVPHSFSHPNYLH----------MEKMALKWMELLGRKAHQHNAVIDILCAGN 477 (860)
Q Consensus 408 ~~~~~k~~~~ggrIivF~sGppt~GpG~l~~~~~~~~~~~----------~ek~a~~fY~~La~~~~~~gisVDiF~~~~ 477 (860)
+.||||++|++|+||.|||+|+.++.++..+. ..+++.+||++||.+|+++||+||+|+++.
T Consensus 160 --------~~gGkI~~F~sg~pt~GpG~l~~r~~~~~~rs~~d~~k~~~~~~~~a~~fY~~la~~~~~~~isvDlF~~s~ 231 (271)
T d2qtva3 160 --------NIPARIILFASGPGTVAPGLIVNSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAGCY 231 (271)
T ss_dssp --------TSCEEEEEEESSCCCSSSSCSSCSBTTSCCCCHHHHHTTCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEECS
T ss_pred --------CCCcEEEEEeCCCCCCCCccccccccccccCCccchhhhhhhhhhhHHHHHHHHHHHHHHCCeEEEEEEecC
Confidence 36899999999999999999998875543321 236899999999999999999999999999
Q ss_pred CCCCcccchhhhcccccEEEEeCCchh-HHHHHHHHHHhc
Q 002992 478 CPVRVPVLQPLAKASGGVLVLHDDFGE-AFGVNLQRASTR 516 (860)
Q Consensus 478 ~~v~la~l~~L~~~TGG~v~~y~~f~~-~f~~dL~r~l~r 516 (860)
+|+|++||++|++.|||.+++|++|++ .|+++|+|+|+|
T Consensus 232 ~~~dl~~l~~l~~~TGG~v~~~~~F~~~~f~~~l~r~~~r 271 (271)
T d2qtva3 232 DQIGMSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRLFAK 271 (271)
T ss_dssp SCCSHHHHTHHHHTTTCCEEEESCTTSHHHHHHHHHTTCB
T ss_pred ccCChHHHHhHHhhCCceEEEeCCcCHHHHHHHHHHHhcC
Confidence 999999999999999999999999984 699999999976
No 2
>d1pd0a3 c.62.1.2 (A:301-552) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2.3e-41 Score=357.63 Aligned_cols=231 Identities=16% Similarity=0.194 Sum_probs=180.3
Q ss_pred CCCcEEEEEECCCC---hhHHHHHHHHHHHhhhcCC---CCcEEEEEEECCeEEEEecCCCCceeeecccCCCCCCHHHH
Q 002992 272 MSAPIILVIDECLD---EPHLQHLQSSLHAFVESIP---PTARIGIILYGRTVSVYDFSEDSIASSDVLAGDKLPTEDSL 345 (860)
Q Consensus 272 ~~p~~vFvID~S~~---~~~l~~l~~sL~~~L~~Lp---~~~~VGlITFd~~V~vy~l~~~~~~~~~V~~g~~~p~~~~l 345 (860)
+||.||||||+|.+ +|.++.++++|+++|+.|| ++++|||||||++||||+++.......+++++.+.+...+|
T Consensus 2 ~Pp~~vFvID~s~~a~~~g~l~~~~~si~~~l~~l~~~~~~~~VgiItf~~~V~~y~l~~~~~~~~~~~~~~~~~~~~dl 81 (252)
T d1pd0a3 2 PPATYCFLIDVSQSSIKSGLLATTINTLLQNLDSIPNHDERTRISILCVDNAIHYFKIPLDSENNEESADQINMMDIADL 81 (252)
T ss_dssp CCCBEEEEEECSHHHHHHTHHHHHHHHHHTTTTTSCCTTSCCEECEEEESSSEEEEECCCGGGC-------CEEECCCCT
T ss_pred CCCEEEEEEECCHHHhhhhHHHHHHHHHHHHHHhCcCCCCCcEEEEEEECCEEEEEEccCCccccccccccccccchhhh
Confidence 67999999999975 6789999999999999997 79999999999999999998654333344433333333333
Q ss_pred HHHhh-cCCccccchhhhHHHHHHHHhhhccCccccccCCCCCchHHHHHHHHHHhcCCCcccccccccCCCCCcEEEEE
Q 002992 346 KALLY-GTGVYLSPMHASKQVAHDIFSSLRPYKLNITEASRDRCLGTAVEVALAIIQGPSAEMSRGVVKRPGGNSRIIVC 424 (860)
Q Consensus 346 ~~l~~-~~~~fL~pl~e~~~~i~~lL~~L~~~~~~~~~~~r~r~~G~AL~~A~~lL~~~~~~~~~~~~k~~~~ggrIivF 424 (860)
++.+. ....|+++++||++.|+++|++|++...+. ....+|+|+||++|..+|+. .||||++|
T Consensus 82 ~~~~~p~~~~~lv~~~e~~~~i~~~L~~l~~~~~~~--~~~~~~~G~Al~~a~~~l~~--------------~gGkI~~f 145 (252)
T d1pd0a3 82 EEPFLPRPNSMVVSLKACRQNIETLLTKIPQIFQSN--LITNFALGPALKSAYHLIGG--------------VGGKIIVV 145 (252)
T ss_dssp TCC-----TTTSEETTTTHHHHHHHHHHHHHHTTTC--CCCCCCHHHHHHHHHHHHTT--------------TCEEEEEE
T ss_pred hhccCCCCccceeeHHHHHHHHHHHHHhChhhcccC--CCCcccHHHHHHHHHHHHhc--------------CCCEEEEE
Confidence 33211 235689999999999999999998865543 23459999999999999986 58999999
Q ss_pred eCCCCCCCCCCccCCCCCCCchh------hhHhHHHHHHHHHHHHHhCCcEEEEEeecCCCCCcccchhhhcccccEEEE
Q 002992 425 AGGPNTYGPGSVPHSFSHPNYLH------MEKMALKWMELLGRKAHQHNAVIDILCAGNCPVRVPVLQPLAKASGGVLVL 498 (860)
Q Consensus 425 ~sGppt~GpG~l~~~~~~~~~~~------~ek~a~~fY~~La~~~~~~gisVDiF~~~~~~v~la~l~~L~~~TGG~v~~ 498 (860)
++|+||.|||+|+.|+.+..... ..+++.+||++||.+|+++||+||+|+++.+++|+++|+.|++.|||.+++
T Consensus 146 ~sg~pt~GpG~l~~r~~~~~~~~~~~~~~~~~~a~~fY~~la~~~~~~~isvdlF~~~~~~~dl~~l~~l~~~TGG~~~~ 225 (252)
T d1pd0a3 146 SGTLPNLGIGKLQRRNESGVVNTSKETAQLLSCQDSFYKNFTIDCSKVQITVDLFLASEDYMDVASLSNLSRFTAGQTHF 225 (252)
T ss_dssp ESSCCCSSTTCCCC--------------------CCHHHHHHHHHTTTTEEEEEEEEESBCCCHHHHHHHHHTTTCCEEE
T ss_pred ecCCCCCCCcccccccccccccCcccchhcccchHHHHHHHHHHHHHCCEEEEEEeccccccCcHHHhhHhhcCCceEEE
Confidence 99999999999998765433221 126789999999999999999999999999999999999999999999999
Q ss_pred eCCchh-------HHHHHHHHHHhccc
Q 002992 499 HDDFGE-------AFGVNLQRASTRAA 518 (860)
Q Consensus 499 y~~f~~-------~f~~dL~r~l~r~~ 518 (860)
|++|+. +|.+||.|.|+|++
T Consensus 226 y~~f~~~~~~d~~k~~~dl~~~l~~~~ 252 (252)
T d1pd0a3 226 YPGFSGKNPNDIVKFSTEFAKHISMDF 252 (252)
T ss_dssp EETCCTTSHHHHHHHHHHHHHHHHCCC
T ss_pred eCCCCcccHHHHHHHHHHHHHhccCCC
Confidence 999963 58899999999863
No 3
>d2qtva1 a.71.2.1 (A:524-626) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.93 E-value=4.7e-26 Score=200.33 Aligned_cols=101 Identities=25% Similarity=0.386 Sum_probs=96.0
Q ss_pred CHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHhcccCCCCCc--cccchhhhHHHHHHHHHccCcCCCCCCC
Q 002992 624 QDEVAAVLIAKRTLLRAKIFSEAIDMRTMIDERVKDIALKFGSQVPKSKL--YRFPKELSALSELLFHLRRSPLLGNIIG 701 (860)
Q Consensus 624 D~ea~~~llaK~av~~~~~~~~~~d~r~~Ld~~li~il~~y~~~~~~~~~--l~Lp~~l~~lP~~~~~L~RS~~L~~~~~ 701 (860)
||||++++|||.++++++++ +..|+.+|||+.||++|++|++| .++++ |+||++|+++|+||||||||++|+++|+
T Consensus 1 DQEaAaVl~AR~a~~k~~~e-~~~Dv~rwlDr~lIrl~~kFg~y-~k~~p~Sf~l~~~fs~~PqfmfhLRRS~flqvfN~ 78 (103)
T d2qtva1 1 DQEAAAVLMARIAVHKAETD-DGADVIRWLDRTLIKLCQKYADY-NKDDPQSFRLAPNFSLYPQFTYYLRRSQFLSVFNN 78 (103)
T ss_dssp CHHHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHHHHHHHHHSEE-ETTEEEEEECCTTTTTHHHHHHHHHTSTTTCCTTC
T ss_pred ChHHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHHHccc-cCCCcccccCCHHHHhhHHHHHHHhhhhhhhccCC
Confidence 89999999999999999985 78999999999999999999998 45444 9999999999999999999999999999
Q ss_pred CchHHHHHHHHHhccCHHHHHHhhc
Q 002992 702 HDDERSVLRNLFLNASFDLSLRMVA 726 (860)
Q Consensus 702 spDer~~~~~~l~~~~v~~~l~~iy 726 (860)
||||++|+|++|+++++.+++.||+
T Consensus 79 SPDETa~yR~~l~re~v~nSl~MIQ 103 (103)
T d2qtva1 79 SPDETAFYRHIFTREDTTNSLIMIQ 103 (103)
T ss_dssp CHHHHHHHHHHHTTCCHHHHHHHHS
T ss_pred CcchHHHHHHHHHHccchhhHHhhC
Confidence 9999999999999999999999996
No 4
>d1pd0a2 b.2.8.1 (A:133-215,A:553-646) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.84 E-value=2e-21 Score=189.90 Aligned_cols=97 Identities=18% Similarity=0.237 Sum_probs=90.5
Q ss_pred cccccceEEEEEecCCeeEEEeeCCCcccccccccccccCcccceeccCCCCceEEEEEEEeccCCCCCceEEEEEEEEE
Q 002992 516 RAAGSHGFLEIRCSDDILVTQIVGPGEEAHIDTHETFKNDAALSIQMPSVEETQSFAVSMENKRDIESNHVFFQFAIRYS 595 (860)
Q Consensus 516 r~~g~~a~lrVR~S~gi~v~~~~G~~~s~~~~~~~~~~~~~~~~i~l~~v~~~~S~~~~~~~~~~~~~~~~~iQ~al~YT 595 (860)
...+|+++||||||+||+|.++|| +|..++.+.+.++.+++|++|+|+|++++.+..+.+|||+|++||
T Consensus 81 l~~a~~~vmRvR~S~Gl~v~~~yG-----------nf~~~s~d~~~lp~id~d~s~a~el~~d~~l~~~~~~~Q~AlLYT 149 (177)
T d1pd0a2 81 LYDCMETVMRARGSTGLRMSRFYG-----------HFFNRSSDLCAFSTMPRDQSYLFEVNVDESIMADYCYVQVAVLLS 149 (177)
T ss_dssp SSTEEEEEEEEEECTTEEEEEEES-----------SSBCSSSSCEEEEEECSSCCEEEEEEECSCCCSSEEEEEEEEEEE
T ss_pred hhhhhheeEEEecCCCeEEEEEEc-----------ceEcCCCCcEEEeecCCCcEEEEEEEecCccCCCcEEEEEEEEEE
Confidence 346999999999999999999999 566666778999999999999999999999988899999999999
Q ss_pred ecCCcEEEEEEEeeecccCchHHHHhhc
Q 002992 596 NVYQADISRVVTVRLPTVDSVSAYLSSF 623 (860)
Q Consensus 596 ~~~G~RriRV~T~~l~vt~~~~~v~~s~ 623 (860)
+.+|+|||||+|+++++++++.+||+++
T Consensus 150 s~~GeRRIRV~T~~lpvts~l~evf~sA 177 (177)
T d1pd0a2 150 LNNSQRRIRIITLAMPTTESLAEVYASA 177 (177)
T ss_dssp ETTTEEEEEEEEEEEEEESCHHHHHHTB
T ss_pred cCCCCEEEEEEeecccccCCHHHHHhcC
Confidence 9999999999999999999999999875
No 5
>d1pd0a1 a.71.2.1 (A:647-753) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.83 E-value=1.2e-20 Score=171.56 Aligned_cols=102 Identities=17% Similarity=0.193 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHhcccCCC-----CCccccchhhhHHHHHHHHHccCcCCCC
Q 002992 624 QDEVAAVLIAKRTLLRAKIFSEAIDMRTMIDERVKDIALKFGSQVPK-----SKLYRFPKELSALSELLFHLRRSPLLGN 698 (860)
Q Consensus 624 D~ea~~~llaK~av~~~~~~~~~~d~r~~Ld~~li~il~~y~~~~~~-----~~~l~Lp~~l~~lP~~~~~L~RS~~L~~ 698 (860)
|+||++++++|+++.++++ +++.|+|++|+++|++++..||++|.. +++|+||++|++||+|+++|+||++|++
T Consensus 1 D~eAi~~~lak~av~~~~~-~~l~daR~~l~~~~v~~l~~Yr~~~~~~~~~~~~ql~lPe~lkllP~yil~LlKs~~~r~ 79 (107)
T d1pd0a1 1 DQLAIASFYNSKAVEKALN-SSLDDARVLINKSVQDILATYKKEIVVSNTAGGAPLRLCANLRMFPLLMHSLTKHMAFRS 79 (107)
T ss_dssp CHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHHCC-----CCCCCEEEGGGTTHHHHHHHHHTSTTTCS
T ss_pred CHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCccccCcHHHHHHHHHHHHHHcchhccC
Confidence 8999999999999999998 589999999999999999999988742 3479999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHhccCHHHHHHhhc
Q 002992 699 IIGHDDERSVLRNLFLNASFDLSLRMVA 726 (860)
Q Consensus 699 ~~~spDer~~~~~~l~~~~v~~~l~~iy 726 (860)
.++++|||+|+++++++++++.++.+||
T Consensus 80 ~~~~~D~R~~~~~~~~~~p~~~l~~~iY 107 (107)
T d1pd0a1 80 GIVPSDHRASALNNLESLPLKYLIKNIY 107 (107)
T ss_dssp SCCCHHHHHHHHHHHHHSCHHHHHHHHS
T ss_pred CCCCccHHHHHHHHHHCCCHHHHHHHhC
Confidence 8999999999999999999999999998
No 6
>d1pd0a5 g.41.10.1 (A:216-300) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.82 E-value=1.6e-21 Score=169.61 Aligned_cols=73 Identities=15% Similarity=0.374 Sum_probs=64.5
Q ss_pred CcccC-CCCcccCCCccccccceEEEcCCCEEEEccCCCcCCCCccccCC---CccccCCCCCcCCCceeEEecCCC
Q 002992 188 LQIIQ-RDPHRCHNCGAFANIYCKILLGSGQWQCVICRNLNGSEGEYVAP---SKEELRNFPELSSPMVDYVQTGNN 260 (860)
Q Consensus 188 ~p~v~-~~pvRC~~C~AYiNPf~~~~~~~~~W~C~~C~~~N~lp~~Y~~~---~~~d~~~~PEL~~~tvEy~~p~~y 260 (860)
+|+++ ..|+||++|+|||||||+|+.+|++|+|+||++.|.+|.+|+.. .+.++.+||||+++||||++|++|
T Consensus 5 vPv~~~~~i~RC~~C~ayiNP~~~~~~~g~~w~C~~C~~~N~~p~~y~~~~~~~~~~~~~rPEL~~~tvEy~ap~~Y 81 (85)
T d1pd0a5 5 PPLNEDGLIVRCRRCRSYMNPFVTFIEQGRRWRCNFCRLANDVPMQMDQSDPNDPKSRYDRNEIKCAVMEYMAPKEY 81 (85)
T ss_dssp CCBCCSCCCCBCSSSCCBCCTTCEEETTTTEEECTTTCCEEECCGGGGC-----CCCGGGSHHHHCSEEEEECCGGG
T ss_pred CcccCCCCCccccCCcCEECCceEEeCCCCEEECCCCCcccCCCHHHhccccCCccccccCcccccceEEEECChhh
Confidence 45554 58999999999999999999999999999999999999999764 345677899999999999999998
No 7
>d2qtva5 g.41.10.1 (A:45-119) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.81 E-value=2.6e-21 Score=163.16 Aligned_cols=70 Identities=27% Similarity=0.534 Sum_probs=63.1
Q ss_pred CcccCCCCcccCC--CccccccceEEEcCCCEEEEccCCCcCCCCccccCCCccccCCCCCcCCCceeEEecCC
Q 002992 188 LQIIQRDPHRCHN--CGAFANIYCKILLGSGQWQCVICRNLNGSEGEYVAPSKEELRNFPELSSPMVDYVQTGN 259 (860)
Q Consensus 188 ~p~v~~~pvRC~~--C~AYiNPf~~~~~~~~~W~C~~C~~~N~lp~~Y~~~~~~d~~~~PEL~~~tvEy~~p~~ 259 (860)
+++++++|+||++ |+|||||||+|+.++++|+|+||++.|.+|++|..++. .+.+|||.++||||+++++
T Consensus 2 ~~~~~~~PvrC~r~~C~ayiNP~~~~~~~~~~W~C~~C~~~N~lP~~Y~~~~~--~~~ppEL~~~tVEyi~p~~ 73 (75)
T d2qtva5 2 LNVAPYNPVVCSGPHCKSILNPYCVIDPRNSSWSCPICNSRNHLPPQYTNLSQ--ENMPLELQSTTIEYITNKP 73 (75)
T ss_dssp CCEESSCCCBCCSTTTCCBCCTTCCEETTTTEEECTTTCCEEECCTTTSSCCT--TSCCHHHHCSEEEEEEEEE
T ss_pred CCccCCCCceeCCCCCCcEECCceEEecCCCEEEecccCccCcCChhhccCCc--cCcCccccCccEEEecCCC
Confidence 5678899999986 99999999999999999999999999999999987653 3457899999999999964
No 8
>d2qtva4 d.109.2.1 (A:627-768) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.78 E-value=7.1e-20 Score=169.97 Aligned_cols=95 Identities=19% Similarity=0.158 Sum_probs=88.0
Q ss_pred ccceeeccCCccccCCccccccCCCcEEEEeCCcEEEEEeCCcccC--------Cccc--hHHHHHHHHHHHHHHHhccC
Q 002992 727 PRCLMYREGGTFEELPAYDLAMQSDKAVVLDHGTDVFIWLGAELAA--------DEGR--SAAALAACRTLAEELSEFRF 796 (860)
Q Consensus 727 P~L~~~~~~~~~~~lP~~~~sl~~d~iyLLD~g~~i~Iw~G~~v~~--------~~~~--~~~~l~~~~~~a~~l~~~R~ 796 (860)
|+|++|+.++..++++++..||++|.|+|||+||+|+||+|+++++ ++|| +++++++++++|++|.++||
T Consensus 1 PtL~sy~~~~~p~pVlLDs~Si~~D~ILLLDtfF~V~I~~G~~Ia~Wrkagy~~~pey~~fk~lLeap~~dA~~ll~~Rf 80 (142)
T d2qtva4 1 PTLTSFSMEDDPQPVLLDSISVKPNTILLLDTFFFILIYHGEQIAQWRKAGYQDDPQYADFKALLEEPKLEAAELLVDRF 80 (142)
T ss_dssp CEEEEECSSSCCEECCSBGGGCCTTCEEEEECSSEEEEEECHHHHHHHHHTGGGSTTTTHHHHHHHHHHHHHHHHHTTCS
T ss_pred CceEEecCCCCCceeecchhhcCCCeEEEEcCCCEEEEEeCcHHHHHHHcCCccChhHHHHHHHHHhHHHHHHHHHHccC
Confidence 8999999888777777888999999999999999999999999986 3444 69999999999999999999
Q ss_pred CCcEEEEEecCCC-CcceeeeecCCC
Q 002992 797 PAPRILAFKVLFC-SIPLPCIVLSFY 821 (860)
Q Consensus 797 p~Pr~i~~~qg~s-~r~lp~~lvp~~ 821 (860)
|+|||++|+||+| +|||.+||+|..
T Consensus 81 P~Pr~i~~~qggSQARfLlsklNPs~ 106 (142)
T d2qtva4 81 PLPRFIDTEAGGSQARFLLSKLNPSD 106 (142)
T ss_dssp SCCEEEEEETTCGGGHHHHTTSBCCS
T ss_pred CCCeEEEecCCCcHHHHHHHhcCCCc
Confidence 9999999999999 999999999987
No 9
>d2qtva2 b.2.8.1 (A:2-44,A:391-523) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.69 E-value=3.8e-17 Score=156.94 Aligned_cols=105 Identities=19% Similarity=0.239 Sum_probs=84.1
Q ss_pred cccceEEEEEecCCeeEEEeeCCCcccccc-ccc----ccccCcccceeccCCCCceEEEEEEEeccCCC----------
Q 002992 518 AGSHGFLEIRCSDDILVTQIVGPGEEAHID-THE----TFKNDAALSIQMPSVEETQSFAVSMENKRDIE---------- 582 (860)
Q Consensus 518 ~g~~a~lrVR~S~gi~v~~~~G~~~s~~~~-~~~----~~~~~~~~~i~l~~v~~~~S~~~~~~~~~~~~---------- 582 (860)
+||||+|+|+||++|||++++|||++++++ .++ -.+......|+++++++.++|+|.||+.+.-.
T Consensus 51 mgFnatlEV~tSkelKV~G~IGpc~Sl~kk~~~~VSdteIG~GgT~~Wk~c~ldp~TT~a~yFev~n~~~~~~p~~~~~~ 130 (176)
T d2qtva2 51 MAFNGNMAVKTSKDLKVQGLIGHASAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAANSNPMMSAPG 130 (176)
T ss_dssp CEEEEEEEEEECTTEEEEEEESSCEECCSCCCSCBCSSCSSBCSCSEEEEEEECTTCCEEEEEEECCC------------
T ss_pred EEcceEEEEEeCCCcEEeeeeeccccCCCcCCCccCcccccccCCCeeEecccCCCCEEEEEEEecCCCCCCCccccCcc
Confidence 899999999999999999999999999655 322 12233345788999999999999999866311
Q ss_pred ----CCceEEEEEEEEEecCCcEEEEEEEeeecccCch-HHHHhh
Q 002992 583 ----SNHVFFQFAIRYSNVYQADISRVVTVRLPTVDSV-SAYLSS 622 (860)
Q Consensus 583 ----~~~~~iQ~al~YT~~~G~RriRV~T~~l~vt~~~-~~v~~s 622 (860)
....||||.++|+|.+|++|+||+|+++++++.- .+|.++
T Consensus 131 ~~~~~~~~~iQFiT~Yqh~sG~~RlRVTTvaR~~~~~~~~~iaag 175 (176)
T d2qtva2 131 SADRPHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPAIAAS 175 (176)
T ss_dssp -----CEEEEEEEEEEEETTTEEEEEEEEEEEEEECTTCHHHHHT
T ss_pred cccccceEEEEEEEEEECCCCCEEEEEEeEeeeccCCCChHhhcc
Confidence 1358999999999999999999999999998732 344433
No 10
>d1pd0a4 d.109.2.1 (A:754-926) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.36 E-value=1.7e-07 Score=91.13 Aligned_cols=90 Identities=10% Similarity=0.092 Sum_probs=58.8
Q ss_pred cccccCCCcEEEEeCCcEEEEEeCCcccCCccc-----------------h-----HHHHHHHHHHHHHHHhccC--CCc
Q 002992 744 YDLAMQSDKAVVLDHGTDVFIWLGAELAADEGR-----------------S-----AAALAACRTLAEELSEFRF--PAP 799 (860)
Q Consensus 744 ~~~sl~~d~iyLLD~g~~i~Iw~G~~v~~~~~~-----------------~-----~~~l~~~~~~a~~l~~~R~--p~P 799 (860)
+.+.|+++|+||||+|..+|+|+|++++++... . .++-+++++.++.+++.|. .++
T Consensus 37 S~e~l~~~G~YLld~G~~~~LwvG~~v~p~ll~dlFGv~s~~~l~~~~~~lp~~~~~~~s~rv~~ii~~lr~~~~~~~~~ 116 (173)
T d1pd0a4 37 TSSLFERYGLYLIDNGNELFLWMGGDAVPALVFDVFGTQDIFDIPIGKQEIPVVENSEFNQRVRNIINQLRNHDDVITYQ 116 (173)
T ss_dssp SGGGCCTTCEEEEECSSCEEEEECTTCCHHHHHHHHSCSCGGGSCCEECCCCCCTTCHHHHHHHHHHHHHTCCSSCCCCC
T ss_pred hHHHccCCCEEEEECCCEEEEEECCCCCHHHHHHHcCCCCHHHcCcccccCcccCCcHHHHHHHHHHHHHHhhcCCcccc
Confidence 456799999999999999999999999863210 0 2566789999999998874 357
Q ss_pred EEEEEecCCCCcceeeeecCCCCCCCchhhhhhhheee
Q 002992 800 RILAFKVLFCSIPLPCIVLSFYSTWQPQLQRFYWSVFI 837 (860)
Q Consensus 800 r~i~~~qg~s~r~lp~~lvp~~~~~~~~~~~~~~~~~~ 837 (860)
++.++++++.....+..+... +.+.|..|+. .+|
T Consensus 117 ~l~vvr~~~~~~~~~~~~~~~---~~~~e~~f~~-~Lv 150 (173)
T d1pd0a4 117 SLYIVRGASLSEPVNHASARE---VATLRLWASS-TLV 150 (173)
T ss_dssp CEEEEECC----------CHH---HHHHHHHHHH-TCT
T ss_pred eEEEEecCCcccccccccccc---cchHHHHHHH-hcc
Confidence 788888888755544433322 3555555554 444
No 11
>d1pd0a2 b.2.8.1 (A:133-215,A:553-646) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.31 E-value=7.6e-08 Score=92.94 Aligned_cols=58 Identities=12% Similarity=0.185 Sum_probs=48.9
Q ss_pred cccCCCCCCCCeeeeecCccCCCHhhhhcCCCceEEEEccCCCCCCC-CcccCCCCcccCCC
Q 002992 141 AEETMPVGESSCVLFSAHKVLKKKKQANVPSLGFGALVSPGKEVSPS-LQIIQRDPHRCHNC 201 (860)
Q Consensus 141 ~~~~~~~~~~~~vR~T~~~iP~t~~~~~~~~lP~g~vv~P~~~~~~~-~p~v~~~pvRC~~C 201 (860)
+..+..||+|+|||+|+|++|.+.+++++++||||++++||+...+. ..++. +||++.
T Consensus 38 ~~~d~~n~~p~~~r~T~~~iP~~~~ll~~~~lP~~~~i~Pf~~l~~a~~~vmR---vR~S~G 96 (177)
T d1pd0a2 38 VPSELSNASPDYIRSTLNAVPKNSSLLKKSKLPFGLVIRPYQHLYDCMETVMR---ARGSTG 96 (177)
T ss_dssp SCSGGGSCCTTTEEESBSSEESSHHHHHHHCCCCEEEECSCCSSSTEEEEEEE---EEECTT
T ss_pred cccccCCCCccceeeeeccCCCCHHHHHHcCCCcEEEeccccchhhhhheeEE---EecCCC
Confidence 34467899999999999999999999999999999999999987653 22334 888865
No 12
>d1shux_ c.62.1.1 (X:) Capillary morphogenesis protein 2 domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.28 E-value=8.6e-06 Score=78.59 Aligned_cols=157 Identities=12% Similarity=0.146 Sum_probs=99.7
Q ss_pred cEEEEEECCCC-hhHHHHHHHHHHHhhhcCC-CCcEEEEEEECCeEEEE-ecCCCCceeeecccCCCCCCHHHHHHHhhc
Q 002992 275 PIILVIDECLD-EPHLQHLQSSLHAFVESIP-PTARIGIILYGRTVSVY-DFSEDSIASSDVLAGDKLPTEDSLKALLYG 351 (860)
Q Consensus 275 ~~vFvID~S~~-~~~l~~l~~sL~~~L~~Lp-~~~~VGlITFd~~V~vy-~l~~~~~~~~~V~~g~~~p~~~~l~~l~~~ 351 (860)
-++||||.|.+ .+....+++.+++.++.+. ++.|||||+|++..+++ ++.
T Consensus 7 Div~llD~S~Sm~~~~~~~k~~~~~~~~~~~~~~~rvglv~fs~~~~~~~~l~--------------------------- 59 (181)
T d1shux_ 7 DLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQATIILPLT--------------------------- 59 (181)
T ss_dssp EEEEEEECSGGGGGGHHHHHHHHHHHHHHCCCTTEEEEEEEESSSEEEEEEEE---------------------------
T ss_pred EEEEEEeCCCCcccCHHHHHHHHHHHHHHhcCCCCEEEEEEeecceEEEEEec---------------------------
Confidence 46999999975 3456667888888887664 68999999999877543 111
Q ss_pred CCccccchhhhHHHHHHHHhhhccCccccccCCCCCchHHHHHHHHHHhcCCCcccccccccCCCCCcEEEEEeCCCCCC
Q 002992 352 TGVYLSPMHASKQVAHDIFSSLRPYKLNITEASRDRCLGTAVEVALAIIQGPSAEMSRGVVKRPGGNSRIIVCAGGPNTY 431 (860)
Q Consensus 352 ~~~fL~pl~e~~~~i~~lL~~L~~~~~~~~~~~r~r~~G~AL~~A~~lL~~~~~~~~~~~~k~~~~ggrIivF~sGppt~ 431 (860)
..+..+.+.|+.|+.... ...+.+|.||+.|...+.... +.+....|+++++|.++.
T Consensus 60 ---------~~~~~~~~~l~~l~~~~~-----~g~t~~~~al~~~~~~~~~~~---------~~~~~~~ivliTDG~~~~ 116 (181)
T d1shux_ 60 ---------GDRGKISKGLEDLKRVSP-----VGETYIHEGLKLANEQIQKAG---------GLKTSSIIIALTDGKLDG 116 (181)
T ss_dssp ---------CCHHHHHHHHHHHHTCCC-----CSCCCHHHHHHHHHHHHHHHT---------GGGSCEEEEEEECCCCCT
T ss_pred ---------CCHHHHHHHhhhcccccC-----CCcchHHHHHHHHHHHhhhcc---------cCCCceEEEEecCCCCCC
Confidence 112223444555554311 234789999999999886411 011234577778886542
Q ss_pred CCCCccCCCCCCCchhhhHhHHHHHHHHHHHHHhCCcEEEEEeecCCCCCcccchhhhcccccEEEEeC-Cch
Q 002992 432 GPGSVPHSFSHPNYLHMEKMALKWMELLGRKAHQHNAVIDILCAGNCPVRVPVLQPLAKASGGVLVLHD-DFG 503 (860)
Q Consensus 432 GpG~l~~~~~~~~~~~~ek~a~~fY~~La~~~~~~gisVDiF~~~~~~v~la~l~~L~~~TGG~v~~y~-~f~ 503 (860)
+ ........++.+.+.|+.|-.+..+ ..+-.+|..++...++ +|+.. +|+
T Consensus 117 ~-------------------~~~~~~~~~~~~k~~gv~v~~vgig--~~~~~~L~~ia~~~~~-~~~~~~~~~ 167 (181)
T d1shux_ 117 L-------------------VPSYAEKEAKISRSLGASVYCVGVL--DFEQAQLERIADSKEQ-VFPVKGGFQ 167 (181)
T ss_dssp T-------------------HHHHHHHHHHHHHHTTCEEEEEECS--SCCHHHHHHHSSSGGG-EEESSSTTH
T ss_pred C-------------------ccHHHHHHHHHHHHCCCEEEEEEeC--ccCHHHHHHHhCCCCc-eEEecCCHH
Confidence 1 1223456777788888766666554 4678899999876654 44444 464
No 13
>d1atza_ c.62.1.1 (A:) von Willebrand factor A3 domain, vWA3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.19 E-value=2.4e-05 Score=75.88 Aligned_cols=159 Identities=15% Similarity=0.279 Sum_probs=101.3
Q ss_pred cEEEEEECCCC--hhHHHHHHHHHHHhhhcC---CCCcEEEEEEECCeEEEE-ecCCCCceeeecccCCCCCCHHHHHHH
Q 002992 275 PIILVIDECLD--EPHLQHLQSSLHAFVESI---PPTARIGIILYGRTVSVY-DFSEDSIASSDVLAGDKLPTEDSLKAL 348 (860)
Q Consensus 275 ~~vFvID~S~~--~~~l~~l~~sL~~~L~~L---p~~~~VGlITFd~~V~vy-~l~~~~~~~~~V~~g~~~p~~~~l~~l 348 (860)
-++||||.|.+ ...++.+++.+++.++.+ +.++|||+|+|++..++. +++..
T Consensus 4 DivfliD~S~s~~~~~f~~~k~~v~~~i~~~~i~~~~~rv~vv~f~~~~~~~~~l~~~---------------------- 61 (184)
T d1atza_ 4 DVILLLDGSSSFPASYFDEMKSFAKAFISKANIGPRLTQVSVLQYGSITTIDVPWNVV---------------------- 61 (184)
T ss_dssp EEEEEEECSSSSCHHHHHHHHHHHHHHHHHSCBSTTSEEEEEEEESSSEEEEECTTCC----------------------
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEeccceeecccccc----------------------
Confidence 46999999974 667899999999999887 467899999998877542 23210
Q ss_pred hhcCCccccchhhhHHHHHHHHhhhccCccccccCCCCCchHHHHHHHHHHhcCCCcccccccccCCCCCcEEEEEeCCC
Q 002992 349 LYGTGVYLSPMHASKQVAHDIFSSLRPYKLNITEASRDRCLGTAVEVALAIIQGPSAEMSRGVVKRPGGNSRIIVCAGGP 428 (860)
Q Consensus 349 ~~~~~~fL~pl~e~~~~i~~lL~~L~~~~~~~~~~~r~r~~G~AL~~A~~lL~~~~~~~~~~~~k~~~~ggrIivF~sGp 428 (860)
.++..+.+.|++|+.. ...+.+|.||+.|...+-.... | .+.+..-.+++|++|.
T Consensus 62 ------------~~~~~l~~~i~~l~~~-------gg~t~~~~al~~~~~~~~~~~~----g--~R~~~~kvvvlltdg~ 116 (184)
T d1atza_ 62 ------------PEKAHLLSLVDVMQRE-------GGPSQIGDALGFAVRYLTSEMH----G--ARPGASKAVVILVTDV 116 (184)
T ss_dssp ------------CCHHHHHHHHHTCCCC-------CCCCCHHHHHHHHHHHHHSCCT----T--CCTTSEEEEEEEECSC
T ss_pred ------------ccHHHHHHHHHhhhhc-------ccccchhhhhhHHHHHhhhhhc----C--CCCCCceEEEEEEecC
Confidence 1122334455566432 2348899999998887643110 0 0011112467777775
Q ss_pred CCCCCCCccCCCCCCCchhhhHhHHHHHHHHHHHHHhCCcEEEEEeecCCCCCcccchhhhcccc-cEEEEeCCchh
Q 002992 429 NTYGPGSVPHSFSHPNYLHMEKMALKWMELLGRKAHQHNAVIDILCAGNCPVRVPVLQPLAKASG-GVLVLHDDFGE 504 (860)
Q Consensus 429 pt~GpG~l~~~~~~~~~~~~ek~a~~fY~~La~~~~~~gisVDiF~~~~~~v~la~l~~L~~~TG-G~v~~y~~f~~ 504 (860)
++. .. ++.++++.+.||.|-.+..+. .+|..+|..++..++ ..++...+|++
T Consensus 117 ~~d------------~~-----------~~~a~~lk~~gi~v~~igiG~-~~~~~~L~~ias~~~~~~~~~~~~~~~ 169 (184)
T d1atza_ 117 SVD------------SV-----------DAAADAARSNRVTVFPIGIGD-RYDAAQLRILAGPAGDSNVVKLQRIED 169 (184)
T ss_dssp CSS------------CC-----------HHHHHHHHHTTEEEEEEEESS-SSCHHHHHHHTGGGGGGGCEEESSTTH
T ss_pred ccc------------hh-----------hHHHHHHHHcCcEEEEEEeCC-cCCHHHHHHHhCCCCcccEEEeCCHHH
Confidence 421 11 234556677887766666654 468889999987554 57777777763
No 14
>d1n3ya_ c.62.1.1 (A:) Integrin alpha-x beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.16 E-value=1e-05 Score=78.65 Aligned_cols=162 Identities=14% Similarity=0.168 Sum_probs=98.5
Q ss_pred EEEEEECCCC--hhHHHHHHHHHHHhhhcCC-CCcEEEEEEECCeEEEE-ecCCCCceeeecccCCCCCCHHHHHHHhhc
Q 002992 276 IILVIDECLD--EPHLQHLQSSLHAFVESIP-PTARIGIILYGRTVSVY-DFSEDSIASSDVLAGDKLPTEDSLKALLYG 351 (860)
Q Consensus 276 ~vFvID~S~~--~~~l~~l~~sL~~~L~~Lp-~~~~VGlITFd~~V~vy-~l~~~~~~~~~V~~g~~~p~~~~l~~l~~~ 351 (860)
++||||.|.+ ...++.+|+.++..++.|. .+.|||||+|++.+.++ +++ +..
T Consensus 5 ivfvlD~S~Sm~~~~~~~~k~~~~~~i~~l~~~~~rv~vv~fs~~~~~~~~l~-------------------~~~----- 60 (189)
T d1n3ya_ 5 IVFLIDGSGSISSRNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQTHFTFE-------------------EFR----- 60 (189)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHHTTSCTTTEEEEEEEESSSEEEEECHH-------------------HHH-----
T ss_pred EEEEEeCCCCCChHHHHHHHHHHHHHHHHhCCCCCEEEEEEeeccceeecccc-------------------ccc-----
Confidence 6999999986 5668899999999999995 56799999999887643 111 000
Q ss_pred CCccccchhhhHHHHHHHHhhhccCccccccCCCCCchHHHHHHHHHHhcCCCcccccccccCCCCCcEEEEEeCCCCCC
Q 002992 352 TGVYLSPMHASKQVAHDIFSSLRPYKLNITEASRDRCLGTAVEVALAIIQGPSAEMSRGVVKRPGGNSRIIVCAGGPNTY 431 (860)
Q Consensus 352 ~~~fL~pl~e~~~~i~~lL~~L~~~~~~~~~~~r~r~~G~AL~~A~~lL~~~~~~~~~~~~k~~~~ggrIivF~sGppt~ 431 (860)
....+.+.|+.+... ...+.+|.||..|..-+-.... + .+.+..-.|+++++|.++.
T Consensus 61 ----------~~~~~~~~i~~~~~~-------~g~t~~~~al~~a~~~~f~~~~----~--~r~~~~kvivllTDG~~~~ 117 (189)
T d1n3ya_ 61 ----------RSSNPLSLLASVHQL-------QGFTYTATAIQNVVHRLFHASY----G--ARRDAAKILIVITDGKKEG 117 (189)
T ss_dssp ----------HCSSGGGGGTTCCCC-------CSCBCHHHHHHHHHTTTTSGGG----T--CCTTSEEEEEEEESSCCBS
T ss_pred ----------cHHHHHHHHHhhhhh-------hhhchHHHHHHHHHHHHhhhhc----C--CCCCCceEEEEEecCCCCC
Confidence 000111123333221 2347899999988764321100 0 0000001366777786543
Q ss_pred CCCCccCCCCCCCchhhhHhHHHHHHHHHHHHHhCCcEEEEEeecC---CCCCcccchhhhcc-cccEEEEeCCchh
Q 002992 432 GPGSVPHSFSHPNYLHMEKMALKWMELLGRKAHQHNAVIDILCAGN---CPVRVPVLQPLAKA-SGGVLVLHDDFGE 504 (860)
Q Consensus 432 GpG~l~~~~~~~~~~~~ek~a~~fY~~La~~~~~~gisVDiF~~~~---~~v~la~l~~L~~~-TGG~v~~y~~f~~ 504 (860)
++- -+++++..+.+.||.|-.+..+. ...+..+|..++.. +++.++..++|++
T Consensus 118 ~~~--------------------~~~~~~~~~~~~gv~i~~Vgig~~~~~~~~~~~L~~ias~~~~~~~~~~~~~~~ 174 (189)
T d1n3ya_ 118 DSL--------------------DYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDA 174 (189)
T ss_dssp CSS--------------------CHHHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHHHHSCSSSGGGEEEESSGGG
T ss_pred Ccc--------------------cHHHHHHHHHHCCCceEEEeccccccccccHHHHHHHhcCCCcceEEEeCCHHH
Confidence 221 02456777788888766665543 34566778888766 5678888888864
No 15
>d1q0pa_ c.62.1.1 (A:) Complement factor B domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.14 E-value=9.8e-06 Score=79.69 Aligned_cols=180 Identities=13% Similarity=0.151 Sum_probs=102.0
Q ss_pred EEEEEECCCC--hhHHHHHHHHHHHhhhcC---CCCcEEEEEEECCeEEEE-ecCCCCceeeecccCCCCCCHHHHHHHh
Q 002992 276 IILVIDECLD--EPHLQHLQSSLHAFVESI---PPTARIGIILYGRTVSVY-DFSEDSIASSDVLAGDKLPTEDSLKALL 349 (860)
Q Consensus 276 ~vFvID~S~~--~~~l~~l~~sL~~~L~~L---p~~~~VGlITFd~~V~vy-~l~~~~~~~~~V~~g~~~p~~~~l~~l~ 349 (860)
++||||.|.+ ...++.+|+.++..++.+ +.+.|||+|+|++.++++ .+...
T Consensus 4 ivfvlD~SgSm~~~~~~~~k~~~~~li~~l~~~~~~~rv~lv~f~~~~~~~~~l~~~----------------------- 60 (209)
T d1q0pa_ 4 IYLVLDGSDSIGASNFTGAKKSLVNLIEKVASYGVKPRYGLVTYATYPKIWVKVSEA----------------------- 60 (209)
T ss_dssp EEEEEECSTTTCHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEEESSSEEEEECTTSG-----------------------
T ss_pred EEEEEeCCCCCChHHHHHHHHHHHHHHHhcccCCCCcEEEEEEecCceeEEecCccc-----------------------
Confidence 6899999975 567888999888888766 468899999999887653 22110
Q ss_pred hcCCccccchhhhHHHHHHHHhhhccCccccccCCCCCchHHHHHHHHHHhcCCCcccccccccCCCCCcEEEEEeCCCC
Q 002992 350 YGTGVYLSPMHASKQVAHDIFSSLRPYKLNITEASRDRCLGTAVEVALAIIQGPSAEMSRGVVKRPGGNSRIIVCAGGPN 429 (860)
Q Consensus 350 ~~~~~fL~pl~e~~~~i~~lL~~L~~~~~~~~~~~r~r~~G~AL~~A~~lL~~~~~~~~~~~~k~~~~ggrIivF~sGpp 429 (860)
....+..+...|+++...... ....+.++.||+.|...+....... ++. +.+..-.|+++++|.+
T Consensus 61 ---------~~~~~~~l~~~i~~i~~~~~~---~~g~t~~~~al~~a~~~~~~~~~~~-~~~--~~~~~kvvvl~TDG~~ 125 (209)
T d1q0pa_ 61 ---------DSSNADWVTKQLNEINYEDHK---LKSGTNTKKALQAVYSMMSWPDDVP-PEG--WNRTRHVIILMTDGLH 125 (209)
T ss_dssp ---------GGGCHHHHHHHHHTCCTTSCS---CTTCCCHHHHHHHHHHHHCCTTSSC-CTT--GGGCEEEEEEEECSCC
T ss_pred ---------hhhHHHHHHHHHHHhhhcccc---CCCCchHHHHHHHHHHHHHhhhccC-ccc--cCCCceEEEEEcCCCc
Confidence 011233445556666542111 1234889999999999986421100 000 0000113777788988
Q ss_pred CCCCCCccCCCCCCCchhhhHhHHHHHH--HHHHHHHhCCcEEEEEeecCCCCCcccchhhhcccccE--EEEeCCchh
Q 002992 430 TYGPGSVPHSFSHPNYLHMEKMALKWME--LLGRKAHQHNAVIDILCAGNCPVRVPVLQPLAKASGGV--LVLHDDFGE 504 (860)
Q Consensus 430 t~GpG~l~~~~~~~~~~~~ek~a~~fY~--~La~~~~~~gisVDiF~~~~~~v~la~l~~L~~~TGG~--v~~y~~f~~ 504 (860)
+.|.... .....+..++. ..+..+...|+.+-.+.++ ..++..+|+.++..++|. +|...++++
T Consensus 126 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~gi~i~~vgvg-~~~~~~~L~~iAs~~~~~~~~f~~~~~~~ 193 (209)
T d1q0pa_ 126 NMGGDPI----------TVIDEIRDLLYIGKDRKNPREDYLDVYVFGVG-PLVNQVNINALASKKDNEQHVFKVKDMEN 193 (209)
T ss_dssp CSSSCTH----------HHHHHHHHHTTCSCBTTBCCGGGEEEEEEECS-SCCCHHHHHHHSCCCTTCCCEEETTC---
T ss_pred cCCCChH----------HHHHHHHHhhhhHHHHHHHHhcCCceEEecCC-ccCCHHHHHHHHcCCCCCeeEEEeCCHHH
Confidence 7654210 00011111110 1122233345444444443 457889999999998875 666667653
No 16
>d1v7pc_ c.62.1.1 (C:) Integrin alpha2-beta1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.02 E-value=3.2e-05 Score=75.31 Aligned_cols=161 Identities=16% Similarity=0.219 Sum_probs=95.5
Q ss_pred EEEEEECCCChhHHHHHHHHHHHhhhcC---CCCcEEEEEEECCeEEE-EecCCCCceeeecccCCCCCCHHHHHHHhhc
Q 002992 276 IILVIDECLDEPHLQHLQSSLHAFVESI---PPTARIGIILYGRTVSV-YDFSEDSIASSDVLAGDKLPTEDSLKALLYG 351 (860)
Q Consensus 276 ~vFvID~S~~~~~l~~l~~sL~~~L~~L---p~~~~VGlITFd~~V~v-y~l~~~~~~~~~V~~g~~~p~~~~l~~l~~~ 351 (860)
++||||.|.+-+.++.+|+.++..++.+ +..+|||+|+|++.+++ ++|+..
T Consensus 4 ivfvlD~S~Sv~~f~~~k~f~~~ii~~~~i~~~~~rv~vv~fs~~~~~~~~l~~~------------------------- 58 (193)
T d1v7pc_ 4 VVVVCDESNSIYPWDAVKNFLEKFVQGLDIGPTKTQVGLIQYANNPRVVFNLNTY------------------------- 58 (193)
T ss_dssp EEEEEECCTTCCCHHHHHHHHHHHHHTSCBSTTSEEEEEEEESSSEEEEECTTTC-------------------------
T ss_pred EEEEEECCCCCccHHHHHHHHHHHHHHcccCCCccEEEEEEeecceeeeecccch-------------------------
Confidence 5899999986567899999999999988 46889999999988764 333210
Q ss_pred CCccccchhhhHHHHHHHHhhhccCccccccCCCCCchHHHHHHHHHHhcCCCcccccccccCCCCCcE-EEEEeCCCCC
Q 002992 352 TGVYLSPMHASKQVAHDIFSSLRPYKLNITEASRDRCLGTAVEVALAIIQGPSAEMSRGVVKRPGGNSR-IIVCAGGPNT 430 (860)
Q Consensus 352 ~~~fL~pl~e~~~~i~~lL~~L~~~~~~~~~~~r~r~~G~AL~~A~~lL~~~~~~~~~~~~k~~~~ggr-IivF~sGppt 430 (860)
..+..+...++.+... ....+.+|.||+.|...+-.... + .+. ..-| ++++++|.++
T Consensus 59 ---------~~~~~~~~~i~~~~~~------~g~~t~~~~AL~~a~~~~f~~~~----~--~R~-~~~kvvVllTDG~s~ 116 (193)
T d1v7pc_ 59 ---------KTKEEMIVATSQTSQY------GGDLTNTFGAIQYARKYAYSAAS----G--GRR-SATKVMVVVTDGESH 116 (193)
T ss_dssp ---------SSHHHHHHHHHHCCCC------CCSCCCHHHHHHHHHHHTTSGGG----T--CCT-TSEEEEEEEESSCCS
T ss_pred ---------hhHHHHHHHHHhhhhh------ccCccchHHHHHHHHHhcccccc----C--CCC-CCceEEEEEecCCcC
Confidence 0112233344555432 12237899999999998732110 0 001 1123 5677788753
Q ss_pred CCCCCccCCCCCCCchhhhHhHHHHHHHHHHHHHhCCcEEEEEeecCC--------CCCcccchhhhccccc-EEEEeCC
Q 002992 431 YGPGSVPHSFSHPNYLHMEKMALKWMELLGRKAHQHNAVIDILCAGNC--------PVRVPVLQPLAKASGG-VLVLHDD 501 (860)
Q Consensus 431 ~GpG~l~~~~~~~~~~~~ek~a~~fY~~La~~~~~~gisVDiF~~~~~--------~v~la~l~~L~~~TGG-~v~~y~~ 501 (860)
.+. . ....+.++...||.+-.+..+.. ..+..+|..++..+++ .++..++
T Consensus 117 d~~--------------~-------~~~~~~~~~~~gv~v~~Igvg~~~~~~~~~~~~~~~~L~~Ias~p~~~~~f~v~d 175 (193)
T d1v7pc_ 117 DGS--------------M-------LKAVIDQCNHDNILRFGIAVLGYLNRNALDTKNLIKEIKAIASIPTERYFFNVSD 175 (193)
T ss_dssp CGG--------------G-------HHHHHHHHHHTTEEEEEEEECHHHHHTTCCCHHHHHHHHHHSCSSHHHHEEEESS
T ss_pred CCc--------------c-------HHHHHHHHHhCCCEEEEEEeCCccccccccccccHHHHHHHhcCCCcceEEEcCC
Confidence 211 0 02346666777765544433211 1123457778777655 4666788
Q ss_pred chh
Q 002992 502 FGE 504 (860)
Q Consensus 502 f~~ 504 (860)
|+.
T Consensus 176 ~~~ 178 (193)
T d1v7pc_ 176 EAA 178 (193)
T ss_dssp SGG
T ss_pred HHH
Confidence 864
No 17
>d1ijba_ c.62.1.1 (A:) von Willebrand factor A1 domain, vWA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.99 E-value=8.8e-05 Score=72.79 Aligned_cols=171 Identities=9% Similarity=0.098 Sum_probs=104.9
Q ss_pred EEEEEECCCC--hhHHHHHHHHHHHhhhcC---CCCcEEEEEEECCeEEE-EecCCCCceeeecccCCCCCCHHHHHHHh
Q 002992 276 IILVIDECLD--EPHLQHLQSSLHAFVESI---PPTARIGIILYGRTVSV-YDFSEDSIASSDVLAGDKLPTEDSLKALL 349 (860)
Q Consensus 276 ~vFvID~S~~--~~~l~~l~~sL~~~L~~L---p~~~~VGlITFd~~V~v-y~l~~~~~~~~~V~~g~~~p~~~~l~~l~ 349 (860)
++||||.|.+ ...++.+|+.+.+.++.+ +.+.|||+|+|++..+. +++.. ..+
T Consensus 16 l~fvlD~S~S~~~~~f~~~k~fv~~~i~~l~~~~~~~rvavv~y~~~~~~~~~l~~-------------~~~-------- 74 (202)
T d1ijba_ 16 LVFLLDGSSRLSEAEFEVLKAFVVDMMERLRVSQKWVRVAVVEYHDGSHAYIGLKD-------------RKR-------- 74 (202)
T ss_dssp EEEEEECBTTSCHHHHHHHHHHHHHHHHTBCBSTTSEEEEEEEESSSEEEEECTTC-------------CCC--------
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHHhccCCCCcEEEEEEEecceeeecCCcc-------------cch--------
Confidence 5999999975 567899999999999887 56789999999987754 23321 011
Q ss_pred hcCCccccchhhhHHHHHHHHhhhccCccccccCCCCCchHHHHHHHHHHhcCCCcccccccccCCCCCcEEEEEeCCCC
Q 002992 350 YGTGVYLSPMHASKQVAHDIFSSLRPYKLNITEASRDRCLGTAVEVALAIIQGPSAEMSRGVVKRPGGNSRIIVCAGGPN 429 (860)
Q Consensus 350 ~~~~~fL~pl~e~~~~i~~lL~~L~~~~~~~~~~~r~r~~G~AL~~A~~lL~~~~~~~~~~~~k~~~~ggrIivF~sGpp 429 (860)
++.+.+.+++|+.. +...+.+|.||+.|..-+-.... +.+..-.++++++|..
T Consensus 75 -------------~~~l~~~i~~l~~~------~g~~~~~~~al~~~~~~~~~~~~--------r~~~~k~vivitdg~~ 127 (202)
T d1ijba_ 75 -------------PSELRRIASQVKYA------GSQVASTSEVLKYTLFQIFSKID--------RPEASRIALLLMASQE 127 (202)
T ss_dssp -------------HHHHHHHHHTCCCC------CBSCCCHHHHHHHHHHHTSSSCS--------CTTSEEEEEEEECCCC
T ss_pred -------------HHHHHHHHHhhhhh------hhccccHHHHHHHHHHHhhhhcc--------CCCCcceEEEecccCC
Confidence 22334455666542 12347789999988766543110 1111124577777743
Q ss_pred CCCCCCccCCCCCCCchhhhHhHHHHHHHHHHHHHhCCcEEEEEeecCCCCCcccchhhhccc-ccEEEEeCCchh--HH
Q 002992 430 TYGPGSVPHSFSHPNYLHMEKMALKWMELLGRKAHQHNAVIDILCAGNCPVRVPVLQPLAKAS-GGVLVLHDDFGE--AF 506 (860)
Q Consensus 430 t~GpG~l~~~~~~~~~~~~ek~a~~fY~~La~~~~~~gisVDiF~~~~~~v~la~l~~L~~~T-GG~v~~y~~f~~--~f 506 (860)
... ... . ..+.++++.+.||.|=.+..+ ...+..+|..++..+ ++.++..++|++ .+
T Consensus 128 ~~~-----------~~~----~----~~~~~~~l~~~gv~i~~Vgig-~~~~~~~L~~ia~~~~~~~~~~~~~~~~L~~~ 187 (202)
T d1ijba_ 128 PQR-----------MSR----N----FVRYVQGLKKKKVIVIPVGIG-PHANLKQIRLIEKQAPENKAFVLSSVDELEQQ 187 (202)
T ss_dssp CGG-----------GCT----T----HHHHHHHHHHTTEEEEEEEES-TTSCHHHHHHHHHHCTTCCCEEESSGGGHHHH
T ss_pred Ccc-----------cch----H----HHHHHHHHHHcCCeEEEEEeC-CcCCHHHHHHHhcCCCcCcEEEeCCHHHHHHH
Confidence 110 000 0 134566777888654444443 456788898888654 467888999874 34
Q ss_pred HHHHHHHH
Q 002992 507 GVNLQRAS 514 (860)
Q Consensus 507 ~~dL~r~l 514 (860)
.+++.+.+
T Consensus 188 ~~~i~~~i 195 (202)
T d1ijba_ 188 RDEIVSYL 195 (202)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
No 18
>d2qtva2 b.2.8.1 (A:2-44,A:391-523) Sec23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.98 E-value=7.1e-07 Score=84.93 Aligned_cols=40 Identities=23% Similarity=0.254 Sum_probs=37.1
Q ss_pred CCCCeeeeecCccCCCHhhhhcCCCceEEEEccCCCCCCC
Q 002992 148 GESSCVLFSAHKVLKKKKQANVPSLGFGALVSPGKEVSPS 187 (860)
Q Consensus 148 ~~~~~vR~T~~~iP~t~~~~~~~~lP~g~vv~P~~~~~~~ 187 (860)
|+.++||||||+||.++.++.++.+|+||+|+|+++.+++
T Consensus 6 E~~dgvR~swn~~p~s~~e~~~~vvP~~~~ytplker~d~ 45 (176)
T d2qtva2 6 EDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDDE 45 (176)
T ss_dssp HHHHSEEESBSEEESSHHHHHHTCSCEEEEECTTCCCTCT
T ss_pred hcccCcEEEeeccCCChHHhhceeeeeeEEeccCccccCC
Confidence 5679999999999999999999999999999999987653
No 19
>d1pt6a_ c.62.1.1 (A:) Integrin alpha1-beta1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.92 E-value=5.9e-05 Score=73.29 Aligned_cols=161 Identities=13% Similarity=0.178 Sum_probs=95.9
Q ss_pred EEEEEECCCChhHHHHHHHHHHHhhhcCC---CCcEEEEEEECCeEEE-EecCCCCceeeecccCCCCCCHHHHHHHhhc
Q 002992 276 IILVIDECLDEPHLQHLQSSLHAFVESIP---PTARIGIILYGRTVSV-YDFSEDSIASSDVLAGDKLPTEDSLKALLYG 351 (860)
Q Consensus 276 ~vFvID~S~~~~~l~~l~~sL~~~L~~Lp---~~~~VGlITFd~~V~v-y~l~~~~~~~~~V~~g~~~p~~~~l~~l~~~ 351 (860)
++||||.|.+-+.++.+|+.++..++.+. ..+|||+|+|++.+++ +++.. +
T Consensus 4 ivfvlD~S~S~~~~~~~k~f~~~~i~~~~i~~~~~rv~vv~fs~~~~~~~~l~~--------------~----------- 58 (192)
T d1pt6a_ 4 IVIVLDGSNSIYPWDSVTAFLNDLLKRMDIGPKQTQVGIVQYGENVTHEFNLNK--------------Y----------- 58 (192)
T ss_dssp EEEEEECCTTCCCHHHHHHHHHHHHTTSCBSTTSBEEEEEEESSSEEEEECTTT--------------C-----------
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHhccCCCCcEEEEEEEeccEEEEEeCCc--------------c-----------
Confidence 58999999865568889999999998884 6789999999887654 22221 0
Q ss_pred CCccccchhhhHHHHHHHHhhhccCccccccCCCCCchHHHHHHHHHHhcCCCcccccccccCCCCCcE-EEEEeCCCCC
Q 002992 352 TGVYLSPMHASKQVAHDIFSSLRPYKLNITEASRDRCLGTAVEVALAIIQGPSAEMSRGVVKRPGGNSR-IIVCAGGPNT 430 (860)
Q Consensus 352 ~~~fL~pl~e~~~~i~~lL~~L~~~~~~~~~~~r~r~~G~AL~~A~~lL~~~~~~~~~~~~k~~~~ggr-IivF~sGppt 430 (860)
..+..+...++++... +...+.+|.||..|...+-.... |. +. ..-| |+++++|.++
T Consensus 59 ---------~~~~~~~~~i~~~~~~------~g~~~~~~~al~~~~~~~~~~~~----g~--R~-~~~kviillTDG~~~ 116 (192)
T d1pt6a_ 59 ---------SSTEEVLVAAKKIVQR------GGRQTMTALGTDTARKEAFTEAR----GA--RR-GVKKVMVIVTDGESH 116 (192)
T ss_dssp ---------SSHHHHHHHHHTCCCC------CCSSCCHHHHHHHHHHTTTSGGG----TC--CT-TCEEEEEEEESSCCS
T ss_pred ---------hhhHHHHHHHhhhhhh------hhhccchHHHHHHHHHhhhcccc----CC--CC-CcceEEEEEecCCCC
Confidence 1122233344555432 12346789999988865432110 00 00 1123 6677777643
Q ss_pred CCCCCccCCCCCCCchhhhHhHHHHHHHHHHHHHhCCcEEEEEeecCC--------CCCcccchhhhcc-cccEEEEeCC
Q 002992 431 YGPGSVPHSFSHPNYLHMEKMALKWMELLGRKAHQHNAVIDILCAGNC--------PVRVPVLQPLAKA-SGGVLVLHDD 501 (860)
Q Consensus 431 ~GpG~l~~~~~~~~~~~~ek~a~~fY~~La~~~~~~gisVDiF~~~~~--------~v~la~l~~L~~~-TGG~v~~y~~ 501 (860)
. . ...++.++++.+.||.|=.+..+.. ..+..+|..++.. ++..++..++
T Consensus 117 d------------~---------~~~~~~a~~lk~~gi~v~~igvg~~~~~~~~~~~~~~~~L~~IAs~p~~~~~f~v~d 175 (192)
T d1pt6a_ 117 D------------N---------HRLKKVIQDCEDENIQRFSIAILGSYNRGNLSTEKFVEEIKSIASEPTEKHFFNVSD 175 (192)
T ss_dssp C------------S---------HHHHHHHHHHHHTTEEEEEEEECHHHHHTTCCCHHHHHHHHHHSCSSHHHHEEEESS
T ss_pred c------------c---------hhhHHHHHHHHHCCCeEEEEEEecccccccccccccHHHHHHHhcCCCcccEEEcCC
Confidence 1 0 0124567788888876555544311 1123457777765 4556888888
Q ss_pred chh
Q 002992 502 FGE 504 (860)
Q Consensus 502 f~~ 504 (860)
|..
T Consensus 176 ~~~ 178 (192)
T d1pt6a_ 176 ELA 178 (192)
T ss_dssp GGG
T ss_pred HHH
Confidence 874
No 20
>d1mf7a_ c.62.1.1 (A:) Integrin alpha M (CR3, CD11b/CD18, Mac-1 alpha subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.66 E-value=0.00013 Score=71.00 Aligned_cols=162 Identities=11% Similarity=0.214 Sum_probs=95.8
Q ss_pred cEEEEEECCCC--hhHHHHHHHHHHHhhhcCC-CCcEEEEEEECCeEEE-EecCCCCceeeecccCCCCCCHHHHHHHhh
Q 002992 275 PIILVIDECLD--EPHLQHLQSSLHAFVESIP-PTARIGIILYGRTVSV-YDFSEDSIASSDVLAGDKLPTEDSLKALLY 350 (860)
Q Consensus 275 ~~vFvID~S~~--~~~l~~l~~sL~~~L~~Lp-~~~~VGlITFd~~V~v-y~l~~~~~~~~~V~~g~~~p~~~~l~~l~~ 350 (860)
=++||||.|.+ ...++.+|+.++..++.|. .++|||+|+|++.++. +.|. +.
T Consensus 7 DivfvlD~S~s~~~~~~~~~k~f~~~iv~~l~~~~~rv~vv~fs~~~~~~~~l~-------------------~~----- 62 (194)
T d1mf7a_ 7 DIAFLIDGSGSIIPHDFRRMKEFVSTVMEQLKKSKTLFSLMQYSEEFRIHFTFK-------------------EF----- 62 (194)
T ss_dssp EEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCCTTEEEEEEEESSSEEEEECHH-------------------HH-----
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHHHHHHHcCcCCceEEEEEEeccceeEEecc-------------------cc-----
Confidence 36999999986 5678999999999999885 5679999999987764 2221 00
Q ss_pred cCCccccchhhhHHHHHHHHhhhccCccccccCCCCCchHHHHHHHHHHhcCCCcccccccccCCCCCcE-EEEEeCCCC
Q 002992 351 GTGVYLSPMHASKQVAHDIFSSLRPYKLNITEASRDRCLGTAVEVALAIIQGPSAEMSRGVVKRPGGNSR-IIVCAGGPN 429 (860)
Q Consensus 351 ~~~~fL~pl~e~~~~i~~lL~~L~~~~~~~~~~~r~r~~G~AL~~A~~lL~~~~~~~~~~~~k~~~~ggr-IivF~sGpp 429 (860)
.....+.+.|+.|+.. ...+.+|.||..|...+-.... +. +. ..-| ++++++|.+
T Consensus 63 ----------~~~~~~~~~i~~i~~~-------~~~t~~~~al~~~~~~~~~~~~----~~--~~-~~~kvvvliTDG~~ 118 (194)
T d1mf7a_ 63 ----------QNNPNPRSLVKPITQL-------LGRTHTATGIRKVVRELFNITN----GA--RK-NAFKILVVITDGEK 118 (194)
T ss_dssp ----------HHSCCHHHHHTTCCCC-------CSCBCHHHHHHHHHHTTTSGGG----TC--CT-TSEEEEEEEESSCC
T ss_pred ----------CCHHHHHHHHhhhhhh-------hccchHHHHHHHHHHHHHhhhc----cC--CC-CCceEEEEEecCCC
Confidence 0112234445555432 2236789999988887632110 00 00 1123 557787875
Q ss_pred CCCCCCccCCCCCCCchhhhHhHHHHHHHHHHHHHhCCcEEEEEeecC---CCCCcccchhhhcccc-cEEEEeCCchh
Q 002992 430 TYGPGSVPHSFSHPNYLHMEKMALKWMELLGRKAHQHNAVIDILCAGN---CPVRVPVLQPLAKASG-GVLVLHDDFGE 504 (860)
Q Consensus 430 t~GpG~l~~~~~~~~~~~~ek~a~~fY~~La~~~~~~gisVDiF~~~~---~~v~la~l~~L~~~TG-G~v~~y~~f~~ 504 (860)
+.++-.+ .+.+.++.+.||.+=.+..+. ...+..+|..++...+ ..++..++|+.
T Consensus 119 ~~~~~~~--------------------~~~~~~~~~~gv~i~~VGi~~~~~~~~~~~~L~~ias~~~~~~~~~~~~~~~ 177 (194)
T d1mf7a_ 119 FGDPLGY--------------------EDVIPEADREGVIRYVIGVGDAFRSEKSRQELNTIASKPPRDHVFQVNNFEA 177 (194)
T ss_dssp BSCSSCG--------------------GGTHHHHHHTTEEEEEEEESGGGCSHHHHHHHHHHSCSSHHHHEEEESSGGG
T ss_pred CCCchhH--------------------HHHHHHHHHcCCeeEEEecCCcccccccHHHHHHHhcCCCCCeEEEeCCHHH
Confidence 5322111 123555666775443333332 2334566888876544 46778888864
No 21
>d1jeya2 c.62.1.3 (A:34-253) Ku70 subunit N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.61 E-value=0.0006 Score=66.89 Aligned_cols=165 Identities=13% Similarity=0.166 Sum_probs=88.5
Q ss_pred cEEEEEECCCC---------hhHHHHHHHHHHHhhhcC---CCCcEEEEEEECCeEEEEecCCCCceeeecccCCCCCCH
Q 002992 275 PIILVIDECLD---------EPHLQHLQSSLHAFVESI---PPTARIGIILYGRTVSVYDFSEDSIASSDVLAGDKLPTE 342 (860)
Q Consensus 275 ~~vFvID~S~~---------~~~l~~l~~sL~~~L~~L---p~~~~VGlITFd~~V~vy~l~~~~~~~~~V~~g~~~p~~ 342 (860)
.+|||||+|.+ ...++..+++++..+..+ .++.+||||+|++...........+. ++.....+..
T Consensus 4 aivf~ID~S~SM~~~d~~~~~s~~~~~~~~~~~~~~~~i~~~~~d~vglv~f~t~~~~~~~~~~~~~---~~~~l~~~~~ 80 (220)
T d1jeya2 4 SLIFLVDASKAMFESQSEDELTPFDMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIY---VLQELDNPGA 80 (220)
T ss_dssp EEEEEEECSGGGGCCCSSSSCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCSSCBSTTCCTTEE---EEEEEECCCH
T ss_pred EEEEEEECCcccCccccCCCCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEEeccccccCCCcccchh---hhhcccCchH
Confidence 47999999974 123555555666555543 46889999999876653322222111 1101112333
Q ss_pred HHHHHHhhcCCccccchhhhHHHHHHHHhhhccCccccccCCCCCchHHHHHHHHHHhcCCCcccccccccCCCCCcEEE
Q 002992 343 DSLKALLYGTGVYLSPMHASKQVAHDIFSSLRPYKLNITEASRDRCLGTAVEVALAIIQGPSAEMSRGVVKRPGGNSRII 422 (860)
Q Consensus 343 ~~l~~l~~~~~~fL~pl~e~~~~i~~lL~~L~~~~~~~~~~~r~r~~G~AL~~A~~lL~~~~~~~~~~~~k~~~~ggrIi 422 (860)
..++.+. .+.+ .... ..+..+.. ....+.++.||..|..++...... ...-+|+
T Consensus 81 ~~~~~~~--------~~~~-~~~~-~~~~~~~~-------~~~~t~l~~al~~a~~~~~~~~~~---------~~~k~Ii 134 (220)
T d1jeya2 81 KRILELD--------QFKG-QQGQ-KRFQDMMG-------HGSDYSLSEVLWVCANLFSDVQFK---------MSHKRIM 134 (220)
T ss_dssp HHHHHHH--------TTSH-HHHH-HHHHHHHC-------CSCCCCHHHHHHHHHHHHHTCSSC---------EEEEEEE
T ss_pred HHHHhhh--------hhhh-hhhh-hhhhhccc-------CCCCccHHHHHHHHHHHHHhcccc---------cCCcEEE
Confidence 3333221 1111 1111 11122211 134578999999999999763210 0123788
Q ss_pred EEeCCCCCCCCCCccCCCCCCCchhhhHhHHHHHHHHHHHHHhCCcEEEEEeecC-CCCCcc
Q 002992 423 VCAGGPNTYGPGSVPHSFSHPNYLHMEKMALKWMELLGRKAHQHNAVIDILCAGN-CPVRVP 483 (860)
Q Consensus 423 vF~sGppt~GpG~l~~~~~~~~~~~~ek~a~~fY~~La~~~~~~gisVDiF~~~~-~~v~la 483 (860)
+||+|-.+.|... ... ..+ ...+..+...||.|..|..+. +.++..
T Consensus 135 liTDg~~~~~~~~----------~~~-~~~----~~~a~~~~~~gv~i~~i~ig~~~~~d~~ 181 (220)
T d1jeya2 135 LFTNEDNPHGNDS----------AKA-SRA----RTKAGDLRDTGIFLDLMHLKKPGGFDIS 181 (220)
T ss_dssp EEESCSCTTTTCH----------HHH-HHH----HHHHHHHHHHTEEEEEEEBCCTTCCCTT
T ss_pred EEecCCCCCCCcc----------hhh-HHH----HHHHHHHhhhcceEEEEEeCCCCCcchh
Confidence 8999987665421 000 111 235666778899999998763 234443
No 22
>d2fh1a3 d.109.1.1 (A:629-741) Gelsolin {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.60 E-value=3.8e-05 Score=68.74 Aligned_cols=78 Identities=24% Similarity=0.330 Sum_probs=49.2
Q ss_pred cccceeeccC-Cccc--c--CCccccccCCCcEEEEeCCcEEEEEeCCcccCCccchHHHHHHHHHHHHHHH----hccC
Q 002992 726 APRCLMYREG-GTFE--E--LPAYDLAMQSDKAVVLDHGTDVFIWLGAELAADEGRSAAALAACRTLAEELS----EFRF 796 (860)
Q Consensus 726 yP~L~~~~~~-~~~~--~--lP~~~~sl~~d~iyLLD~g~~i~Iw~G~~v~~~~~~~~~~l~~~~~~a~~l~----~~R~ 796 (860)
-||||.++.. |.+. . .|....+|.++.+||||+|..||||+|+.++..+ .......|+++. ..|.
T Consensus 11 ~prLf~~~~~~g~~~~~ev~~~~~q~dL~s~dvfILD~g~~ifvW~G~~a~~~e------r~~a~~~A~~~~~~~~~~r~ 84 (113)
T d2fh1a3 11 PPRLFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEE------KTEALTSAKRYIETDPANRD 84 (113)
T ss_dssp CCEEEEEECTTSSCEEEEECSSCCGGGSCTTSEEEEECSSCEEEEECTTCCHHH------HHHHHHHHHHHHHTC-----
T ss_pred CCEEEEEEcCCCCEEEEEEccCCCHHHCCCCceEEEECCCEEEEEeCCCCCHHH------HHHHHHHHHHHHhhccccCC
Confidence 4999998763 4432 2 2445678999999999999999999999986422 233344455443 3454
Q ss_pred CCcEEEEEecCCC
Q 002992 797 PAPRILAFKVLFC 809 (860)
Q Consensus 797 p~Pr~i~~~qg~s 809 (860)
+...+.++.||..
T Consensus 85 ~~~~i~~v~eG~E 97 (113)
T d2fh1a3 85 RRTPITVVKQGFE 97 (113)
T ss_dssp --CCEEEEETTCC
T ss_pred CCCcEEEEeCCCC
Confidence 4445666677654
No 23
>d1svya_ d.109.1.1 (A:) Severin, domain 2 {Dictyostelium discoideum [TaxId: 44689]}
Probab=97.56 E-value=0.00015 Score=63.46 Aligned_cols=70 Identities=19% Similarity=0.320 Sum_probs=50.6
Q ss_pred cccceeeccCCcc--ccCCccccccCCCcEEEEeCCcEEEEEeCCcccCCccchHHHHHHHHHHHHHHHhccCCCcEE
Q 002992 726 APRCLMYREGGTF--EELPAYDLAMQSDKAVVLDHGTDVFIWLGAELAADEGRSAAALAACRTLAEELSEFRFPAPRI 801 (860)
Q Consensus 726 yP~L~~~~~~~~~--~~lP~~~~sl~~d~iyLLD~g~~i~Iw~G~~v~~~~~~~~~~l~~~~~~a~~l~~~R~p~Pr~ 801 (860)
.||||.++-.+.+ .++|....+|.++.+||||+|..||||+|..++. ...+.....|+.+..+|-..+..
T Consensus 3 ~pRL~~v~G~~~~~~~ev~~~~~~L~s~dvfILd~~~~iyvW~G~~s~~------~er~~a~~~A~~~~~~~~~~~~~ 74 (102)
T d1svya_ 3 KPRLLHISGDKNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSP------QEKNKAAEVARAIDAERKGLPKV 74 (102)
T ss_dssp SCEEEEEECTTSCEEEEECSSGGGCBTTSEEEEECSSEEEEEECTTCCH------HHHHHHHHHHHHHHHHTTTCSEE
T ss_pred CcEEEEEECCCceEEEEecCCHHHcCCCCeEEEEcCCEEEEEECCCCCH------HHHHHHHHHHHHHHhccCCCCCc
Confidence 5999998743332 2467677889999999999999999999999763 22344456677776666544443
No 24
>d1jeyb2 c.62.1.4 (B:6-241) Ku80 subunit N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.42 E-value=0.00036 Score=69.24 Aligned_cols=149 Identities=11% Similarity=0.133 Sum_probs=86.9
Q ss_pred CcEEEEEECCCCh--------hHHHHHHHHHHHhhhcC---CCCcEEEEEEECCeEEEEecCCCCceeeecccCCCCCCH
Q 002992 274 APIILVIDECLDE--------PHLQHLQSSLHAFVESI---PPTARIGIILYGRTVSVYDFSEDSIASSDVLAGDKLPTE 342 (860)
Q Consensus 274 p~~vFvID~S~~~--------~~l~~l~~sL~~~L~~L---p~~~~VGlITFd~~V~vy~l~~~~~~~~~V~~g~~~p~~ 342 (860)
.++|||||+|.+. ..++.+|+.+...++.+ .++.+||||+|++..+-....... .+.
T Consensus 3 ~aiv~~lD~S~SM~~~~~~~~srl~~ak~~~~~~v~~~~~~~~~d~vglV~f~~~~t~~~~~~~~-----------~~~- 70 (236)
T d1jeyb2 3 AAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTDNPLSGGD-----------QYQ- 70 (236)
T ss_dssp EEEEEEEECCGGGGCCBTTBCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCSSCBSTTCTTT-----------CST-
T ss_pred ceEEEEEECChhhccCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEEcCCCccccccccc-----------ccc-
Confidence 3589999999641 25899999999888865 567899999998776422221110 000
Q ss_pred HHHHHHhhcCCccccchhhhHHHHHHHHhhhccCccccccCCCCCchHHHHHHHHHHhcCCCcccccccccCCCCCcEEE
Q 002992 343 DSLKALLYGTGVYLSPMHASKQVAHDIFSSLRPYKLNITEASRDRCLGTAVEVALAIIQGPSAEMSRGVVKRPGGNSRII 422 (860)
Q Consensus 343 ~~l~~l~~~~~~fL~pl~e~~~~i~~lL~~L~~~~~~~~~~~r~r~~G~AL~~A~~lL~~~~~~~~~~~~k~~~~ggrIi 422 (860)
. + .++.++......+...+..+... ......+|.||.+|+.++..... ++....-+|+
T Consensus 71 -~---i-----~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~al~~a~~~~~~~~~-------~~~~~~r~Ii 128 (236)
T d1jeyb2 71 -N---I-----TVHRHLMLPDFDLLEDIESKIQP------GSQQADFLDALIVSMDVIQHETI-------GKKFEKRHIE 128 (236)
T ss_dssp -T---E-----EEEEEEECCCHHHHHHHHTTCCC------CSSCCCHHHHHHHHHHHHHHHSS-------SSCCSEEEEE
T ss_pred -e---E-----EEEeccccchhhHHHHHhhhccc------cccccchhHHHHHHHHHHHHhhh-------cccccccEEE
Confidence 0 0 01233322222222222222211 12336688999999888753110 0011234799
Q ss_pred EEeCCCCCCCCCCccCCCCCCCchhhhHhHHHHHHHHHHHHHhCCcEEEEEeec
Q 002992 423 VCAGGPNTYGPGSVPHSFSHPNYLHMEKMALKWMELLGRKAHQHNAVIDILCAG 476 (860)
Q Consensus 423 vF~sGppt~GpG~l~~~~~~~~~~~~ek~a~~fY~~La~~~~~~gisVDiF~~~ 476 (860)
+|++|..+.|. . -++.+++.+.+.||.|+++..+
T Consensus 129 L~TDG~~~~~~---------~-----------~~~~~a~~l~~~~I~i~~ig~g 162 (236)
T d1jeyb2 129 IFTDLSSRFSK---------S-----------QLDIIIHSLKKCDISLQFFLPF 162 (236)
T ss_dssp EECCCCSCCCC---------T-----------THHHHHHHHHHTTEEEEEEESS
T ss_pred EEecCCCCcCh---------H-----------HHHHHHHHHHHcCCEEEEEecC
Confidence 99998655431 0 1256788889999999998765
No 25
>d1mjna_ c.62.1.1 (A:) Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.33 E-value=0.0015 Score=62.43 Aligned_cols=153 Identities=12% Similarity=0.231 Sum_probs=91.5
Q ss_pred EEEEEECCCC--hhHHHHHHHHHHHhhhcCC-CCcEEEEEEECCeEEEE-ecCCCCceeeecccCCCCCCHHHHHHHhhc
Q 002992 276 IILVIDECLD--EPHLQHLQSSLHAFVESIP-PTARIGIILYGRTVSVY-DFSEDSIASSDVLAGDKLPTEDSLKALLYG 351 (860)
Q Consensus 276 ~vFvID~S~~--~~~l~~l~~sL~~~L~~Lp-~~~~VGlITFd~~V~vy-~l~~~~~~~~~V~~g~~~p~~~~l~~l~~~ 351 (860)
++||||.|.+ ...++.+|+.+++.++.+. .++|||+|+|++.++.. +|+ +.
T Consensus 5 ivfllD~S~Si~~~~f~~~k~f~~~~i~~i~~~~~rvgvv~fs~~~~~~~~l~-------------------~~------ 59 (179)
T d1mjna_ 5 LVFLFDGSMSLQPDEFQKILDFMKDVMKKCSNTSYQFAAVQFSTSYKTEFDFS-------------------DY------ 59 (179)
T ss_dssp EEEEEECBTTCCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSSEEEEECHH-------------------HH------
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEEEeeeeeEEechh-------------------hc------
Confidence 5999999974 6678999999999999885 57799999999877652 111 10
Q ss_pred CCccccchhhhHHHHHHHHhhhccCccccccCCCCCchHHHHHHHHHHh-cCCCcccccccccCCCCCcE-EEEEeCCCC
Q 002992 352 TGVYLSPMHASKQVAHDIFSSLRPYKLNITEASRDRCLGTAVEVALAII-QGPSAEMSRGVVKRPGGNSR-IIVCAGGPN 429 (860)
Q Consensus 352 ~~~fL~pl~e~~~~i~~lL~~L~~~~~~~~~~~r~r~~G~AL~~A~~lL-~~~~~~~~~~~~k~~~~ggr-IivF~sGpp 429 (860)
...+.+.+.|+.++.. ...+.+|.||+.|..-+ .... | .+.+ .-| ++++++|.+
T Consensus 60 ---------~~~~~~~~~i~~i~~~-------~g~t~~~~AL~~~~~~~f~~~~-----g--~R~~-~~kvvvllTDG~s 115 (179)
T d1mjna_ 60 ---------VKRKDPDALLKHVKHM-------LLLTNTFGAINYVATEVFREEL-----G--ARPD-ATKVLIIITDGEA 115 (179)
T ss_dssp ---------HHHCCHHHHHTTCCCC-------CBCCCHHHHHHHHHHHTSSGGG-----T--CCTT-SEEEEEEEESSCC
T ss_pred ---------cchHHHHHHHhhhhcc-------cCcchHHHHHHHHHHHHhchhc-----C--CCCC-CCeEEEEEECCCC
Confidence 1122244455555432 23488999999887644 2210 0 0011 124 566778865
Q ss_pred CCCCCCccCCCCCCCchhhhHhHHHHHHHHHHHHHhCCcEEEEEeecCCC---CCcccchhhhcc-cccEEEEeCCchh
Q 002992 430 TYGPGSVPHSFSHPNYLHMEKMALKWMELLGRKAHQHNAVIDILCAGNCP---VRVPVLQPLAKA-SGGVLVLHDDFGE 504 (860)
Q Consensus 430 t~GpG~l~~~~~~~~~~~~ek~a~~fY~~La~~~~~~gisVDiF~~~~~~---v~la~l~~L~~~-TGG~v~~y~~f~~ 504 (860)
+... .. +...|+.+..+..+... .+..+|..++.. ++..++..++|..
T Consensus 116 ~d~~----------~~-----------------~~~~~i~~~~igvg~~~~~~~~~~~L~~ias~p~~~~~~~~~~~~~ 167 (179)
T d1mjna_ 116 TDSG----------NI-----------------DAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEK 167 (179)
T ss_dssp SSCS----------CC-----------------GGGTTSEEEEEEESGGGCSHHHHHTTGGGSCSCHHHHEEEESSGGG
T ss_pred cccc----------hH-----------------HHHhcCccceEEecccccchhhHHHHHHHhCCCccceEEEcCCHHH
Confidence 4211 00 12346666666554322 233457777654 3456888888864
No 26
>d1j72a2 d.109.1.1 (A:125-240) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.20 E-value=0.00052 Score=61.34 Aligned_cols=76 Identities=16% Similarity=0.164 Sum_probs=51.3
Q ss_pred ccceeeccCCc--cccCCccccccCCCcEEEEeCCcEEEEEeCCcccCCccchHHHHHHHHHHHHHHHh-ccCCCcEEEE
Q 002992 727 PRCLMYREGGT--FEELPAYDLAMQSDKAVVLDHGTDVFIWLGAELAADEGRSAAALAACRTLAEELSE-FRFPAPRILA 803 (860)
Q Consensus 727 P~L~~~~~~~~--~~~lP~~~~sl~~d~iyLLD~g~~i~Iw~G~~v~~~~~~~~~~l~~~~~~a~~l~~-~R~p~Pr~i~ 803 (860)
+|||.+..... ..++|....+|.++.+||||+|..||+|+|+.++. .-.......|+.+.. +|.....+++
T Consensus 12 ~rL~~v~G~~~~~~~eV~~~~~sL~s~dvfILd~~~~iyvW~G~~ss~------~ek~~a~~~a~~~~~~~~~~~~~v~~ 85 (116)
T d1j72a2 12 QRLYQVKGKKNIRATERALNWDSFNTGDCFILDLGQNIFAWCGGKSNI------LERNKARDLALAIRDSERQGKAQVEI 85 (116)
T ss_dssp EEEEEEECSSSCEEEEECSSGGGCBTTSEEEEEETTEEEEEECTTCCH------HHHHHHHHHHHHHHTTSCCSSCEEEE
T ss_pred cEEEEEECCCceEEEEeCCCHHHcCCCCEEEEECCCEEEEEECCCCCH------HHHHHHHHHHHHHHhccCCCCCcEEE
Confidence 68888864332 22456677889999999999999999999999753 222344555666643 4444455555
Q ss_pred EecCC
Q 002992 804 FKVLF 808 (860)
Q Consensus 804 ~~qg~ 808 (860)
+.||.
T Consensus 86 v~eG~ 90 (116)
T d1j72a2 86 VTDGE 90 (116)
T ss_dssp EETTC
T ss_pred EECCC
Confidence 55543
No 27
>d1kcqa_ d.109.1.1 (A:) Gelsolin {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.12 E-value=0.0009 Score=58.53 Aligned_cols=74 Identities=15% Similarity=0.218 Sum_probs=47.9
Q ss_pred cceeeccCCc--cccCCccccccCCCcEEEEeCCcEEEEEeCCcccCCccchHHHHHHHHHHHHHHHh-ccCCCcEEEEE
Q 002992 728 RCLMYREGGT--FEELPAYDLAMQSDKAVVLDHGTDVFIWLGAELAADEGRSAAALAACRTLAEELSE-FRFPAPRILAF 804 (860)
Q Consensus 728 ~L~~~~~~~~--~~~lP~~~~sl~~d~iyLLD~g~~i~Iw~G~~v~~~~~~~~~~l~~~~~~a~~l~~-~R~p~Pr~i~~ 804 (860)
|||.++-... ..++|....+|.++.+||||+|..||||+|...+..+ .......|+.|.. +|...+.+.++
T Consensus 4 RLy~v~G~~~i~~~eV~~~~~~L~s~dvfILd~~~~iyvW~G~~s~~~e------k~~a~~~a~~l~~~~~~~~~~i~~v 77 (104)
T d1kcqa_ 4 RLFQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYE------RLKATQVSKGIRDNERSGRARVHVS 77 (104)
T ss_dssp EEEEEEESSSEEEEEECSSGGGCCTTSEEEEECSSEEEEEECTTCCHHH------HHHHHHHHHHHHHHTSTTCSEEEEE
T ss_pred EEEEEECCCcEEEEEeCCCHHHcCCCCeEEEEcCCeEEEEECCcCCHHH------HHHHHHHHHHHHhcCCCCCceEEEE
Confidence 5666542222 2245666678999999999999999999999976422 2344555666643 45545555555
Q ss_pred ecC
Q 002992 805 KVL 807 (860)
Q Consensus 805 ~qg 807 (860)
+||
T Consensus 78 ~eG 80 (104)
T d1kcqa_ 78 EEG 80 (104)
T ss_dssp ETT
T ss_pred eCC
Confidence 554
No 28
>d2fh1a2 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.96 E-value=0.00077 Score=58.15 Aligned_cols=47 Identities=21% Similarity=0.381 Sum_probs=36.8
Q ss_pred cccceeeccCCc----cccCCccccccCCCcEEEEeCCcEEEEEeCCcccC
Q 002992 726 APRCLMYREGGT----FEELPAYDLAMQSDKAVVLDHGTDVFIWLGAELAA 772 (860)
Q Consensus 726 yP~L~~~~~~~~----~~~lP~~~~sl~~d~iyLLD~g~~i~Iw~G~~v~~ 772 (860)
.+|||.++.... ..+++....+|.++.+||||+|..||||+|+..+.
T Consensus 3 ~~RLf~v~g~~~~~~~~~EV~~~~ssLns~d~fILd~~~~iyvW~G~~s~~ 53 (96)
T d2fh1a2 3 STRLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTGASE 53 (96)
T ss_dssp SSEEEEEEECTTCCEEEEEECCSGGGCBTTSEEEEECSSCEEEEECTTCCH
T ss_pred CcEEEEEECCCCCeEEEEEeCCCHHHhCCCCeEEEECCCEEEEEECCCCCH
Confidence 378888864322 12356667789999999999999999999999764
No 29
>d1j72a3 d.109.1.1 (A:241-347) Macrophage capping protein Cap G {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.64 E-value=0.0049 Score=53.75 Aligned_cols=78 Identities=22% Similarity=0.263 Sum_probs=49.0
Q ss_pred cccceeeccC-Cccc--c----CCccccccCCCcEEEEeCC--cEEEEEeCCcccCCccchHHHHHHHHHHHHHHH--hc
Q 002992 726 APRCLMYREG-GTFE--E----LPAYDLAMQSDKAVVLDHG--TDVFIWLGAELAADEGRSAAALAACRTLAEELS--EF 794 (860)
Q Consensus 726 yP~L~~~~~~-~~~~--~----lP~~~~sl~~d~iyLLD~g--~~i~Iw~G~~v~~~~~~~~~~l~~~~~~a~~l~--~~ 794 (860)
-|+||.+++. |.+. . .|.....|.++.+||||+| ..||||+|+..+..+ .......|.++. ..
T Consensus 7 ~~~Ly~vs~~~G~~~~~~v~~~~p~~~~~L~s~dvfILD~~~~~~iyvW~G~~s~~~e------k~~a~~~A~~~~~~~~ 80 (107)
T d1j72a3 7 AAALYKVSDATGQMNLTKVADSSPFALELLISDDCFVLDNGLCGKIYIWKGRKANEKE------RQAALQVAEGFISRMQ 80 (107)
T ss_dssp CCEEEEEECTTSSCEEEEEECSSSBCGGGCCTTSEEEEECGGGSEEEEEECTTCCHHH------HHHHHHHHHHHHHHHT
T ss_pred CCEEEEEECCCCCEEEEEEecCCccCHHHCCCCCEEEEeccCCCEEEEEECCCCCHHH------HHHHHHHHHHHHHhcC
Confidence 4789988763 4432 1 3445567999999999997 469999999976422 122233333322 23
Q ss_pred cCCCcEEEEEecCCC
Q 002992 795 RFPAPRILAFKVLFC 809 (860)
Q Consensus 795 R~p~Pr~i~~~qg~s 809 (860)
|.....+.++.||..
T Consensus 81 ~~~~~~v~~v~eG~E 95 (107)
T d1j72a3 81 YAPNTQVEILPQGRE 95 (107)
T ss_dssp CCTTCEEEEEETTCC
T ss_pred CCCCCcEEEEeCCCC
Confidence 433455667777765
No 30
>d1d0na3 d.109.1.1 (A:263-383) Gelsolin {Horse (Equus caballus) [TaxId: 9796]}
Probab=96.34 E-value=0.0041 Score=55.63 Aligned_cols=77 Identities=21% Similarity=0.297 Sum_probs=49.2
Q ss_pred ccceeeccC-Cccc------cCCccccccCCCcEEEEeCCc--EEEEEeCCcccCCccchHHHHHHHHHHHHHHH--hcc
Q 002992 727 PRCLMYREG-GTFE------ELPAYDLAMQSDKAVVLDHGT--DVFIWLGAELAADEGRSAAALAACRTLAEELS--EFR 795 (860)
Q Consensus 727 P~L~~~~~~-~~~~------~lP~~~~sl~~d~iyLLD~g~--~i~Iw~G~~v~~~~~~~~~~l~~~~~~a~~l~--~~R 795 (860)
++||.+++. |.+. ..|.....|.++.+||||+|. .||||+|+..+..+. ......|+++. ..|
T Consensus 9 ~rLy~vs~~~G~~~~~~v~~~~p~~~s~L~s~dvfILD~~~e~~IyvW~G~~ss~~ek------~~A~~~A~~~~~~~~~ 82 (121)
T d1d0na3 9 AKLYKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKIFVWKGKQANMEER------KAALKTASDFISKMDY 82 (121)
T ss_dssp CEEEEEECSSSSCEEEEEESSSSBCGGGCCTTSEEEEEEGGGTEEEEEECTTSCHHHH------TTHHHHHHHHHHHTTC
T ss_pred CEEEEEECCCCCEEEEEEccCCCcCHHHCCCCCEEEEeeCCCCEEEEEeCCCCCHHHH------HHHHHHHHHHHHhhcC
Confidence 688888753 3322 135556789999999999976 599999999764321 22234444432 244
Q ss_pred CCCcEEEEEecCCC
Q 002992 796 FPAPRILAFKVLFC 809 (860)
Q Consensus 796 ~p~Pr~i~~~qg~s 809 (860)
.+...+.++.||..
T Consensus 83 ~~~~~v~~v~eG~E 96 (121)
T d1d0na3 83 PKQTQVSVLPEGGE 96 (121)
T ss_dssp CTTCEEEEEETTCC
T ss_pred CCCCeEEEEcCCCC
Confidence 44555666777764
No 31
>d1tyeb2 c.62.1.1 (B:107-354) Integrin beta A domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.57 E-value=0.017 Score=57.88 Aligned_cols=192 Identities=13% Similarity=0.038 Sum_probs=97.3
Q ss_pred EEEEEECCCC-hhHHHHHHHHHHHhhhc---CCCCcEEEEEEECCeEEEEecCCC--Cc-e-eeecccCCCCCCHHHHHH
Q 002992 276 IILVIDECLD-EPHLQHLQSSLHAFVES---IPPTARIGIILYGRTVSVYDFSED--SI-A-SSDVLAGDKLPTEDSLKA 347 (860)
Q Consensus 276 ~vFvID~S~~-~~~l~~l~~sL~~~L~~---Lp~~~~VGlITFd~~V~vy~l~~~--~~-~-~~~V~~g~~~p~~~~l~~ 347 (860)
++||||+|.+ ..+++.+|+.+...++. ...+.|+||++|.....-...... .. . .++-......+
T Consensus 8 l~Fv~D~TgSM~~~i~~vk~~i~~i~~~l~~~~~~~r~g~~~f~D~~~~p~~~~~~~~~~~~p~~~~~~~~~~------- 80 (248)
T d1tyeb2 8 IYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLP------- 80 (248)
T ss_dssp EEEEEECSGGGGGGHHHHHHHHHHHHHHHHHHCSCEEEEEEEECCCSSTTTSCCCSGGGGTCGGGGGTSCCCC-------
T ss_pred EEEEEECCcCHHHHHHHHHHHHHHHHHHHHhhCcCceEEEEEEEecccCccccccchhhccCccccccccccc-------
Confidence 5999999998 55788888877766554 457899999999654311000000 00 0 00000000000
Q ss_pred HhhcCCcc--ccchhhhHHHHHHHHhhhccCccccccCCCCCchHHHHHHHH---HHhcCCCcccccccccCCCCCcEEE
Q 002992 348 LLYGTGVY--LSPMHASKQVAHDIFSSLRPYKLNITEASRDRCLGTAVEVAL---AIIQGPSAEMSRGVVKRPGGNSRII 422 (860)
Q Consensus 348 l~~~~~~f--L~pl~e~~~~i~~lL~~L~~~~~~~~~~~r~r~~G~AL~~A~---~lL~~~~~~~~~~~~k~~~~ggrIi 422 (860)
.-.| ..++....+.+.+.|+.+..... +..+-+.-.||.-|. .-+.- ...+-|++
T Consensus 81 ----~f~~~~~~~~t~d~~~f~~~l~~~~~~Gg----gD~pE~~~~Al~~a~~~~~~i~W------------r~~a~r~v 140 (248)
T d1tyeb2 81 ----MFGYKHVLTLTDQVTRFNEEVKKQSVSRN----RDAPEGGFDAIMQATVCDEKIGW------------RNDASHLL 140 (248)
T ss_dssp ----CCSEEEEEEEESCHHHHHHHHTTCCCCCC----SSSSBCHHHHHHHHHHCHHHHTC------------CTTSEEEE
T ss_pred ----cccceecCCCCCCHHHHHHHHhheecccC----CCCcchHHHHHHHHHHHhhhCCC------------CCCccEEE
Confidence 0001 23445566677777777765321 122333444554333 22221 01244665
Q ss_pred EE-eCCCCC-CCCCCccCCCC----C----CCchhhhHhHHHHH---HHHHHHHHhCCcEEEEEeecCCCCCcccchhhh
Q 002992 423 VC-AGGPNT-YGPGSVPHSFS----H----PNYLHMEKMALKWM---ELLGRKAHQHNAVIDILCAGNCPVRVPVLQPLA 489 (860)
Q Consensus 423 vF-~sGppt-~GpG~l~~~~~----~----~~~~~~ek~a~~fY---~~La~~~~~~gisVDiF~~~~~~v~la~l~~L~ 489 (860)
++ ++.+|- .|.|++..... . ....+. .....+| .++.+++.+++|.+ +|+..... ....+.|+
T Consensus 141 iliTDA~~H~~~d~~l~g~~~~~d~~~~~~~~~~~~-~~~~~dyps~~ql~~~l~~~~i~~-ifavt~~~--~~~Y~~l~ 216 (248)
T d1tyeb2 141 VFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYS-ASTTMDYPSLGLMTEKLSQKNINL-IFAVTENV--VNLYQNYS 216 (248)
T ss_dssp EEEESSCBCCTTGGGGGTCCSCCCCCCCBCTTSBBG-GGGTSCCCCHHHHHHHHHHTTEEE-EEEECGGG--HHHHHHHH
T ss_pred EEECCCCcccccccccccccccCCCccccCCCCccc-ccccccCCCHHHHHHHHHHhCcEE-EEEECchh--hHHHHHHH
Confidence 55 556665 35555442110 0 000111 1111112 56777888889887 46666555 34567899
Q ss_pred cccccEEEE
Q 002992 490 KASGGVLVL 498 (860)
Q Consensus 490 ~~TGG~v~~ 498 (860)
++++|..+-
T Consensus 217 ~~~~g~~~~ 225 (248)
T d1tyeb2 217 ELIPGTTVG 225 (248)
T ss_dssp HTSTTCEEE
T ss_pred HhcCCcEEE
Confidence 999887654
No 32
>d1yvra2 c.62.1.5 (A:364-537) 60-kda SS-A/Ro ribonucleoprotein, RoRNP {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=94.56 E-value=0.029 Score=52.51 Aligned_cols=46 Identities=9% Similarity=0.054 Sum_probs=30.2
Q ss_pred CcEEEEEECCCCh------hHHHHHHHHHHHhhhcCCCCcEEEEEEECCeEE
Q 002992 274 APIILVIDECLDE------PHLQHLQSSLHAFVESIPPTARIGIILYGRTVS 319 (860)
Q Consensus 274 p~~vFvID~S~~~------~~l~~l~~sL~~~L~~Lp~~~~VGlITFd~~V~ 319 (860)
-.++|+||+|.+- ..+...+.++...+..+.++.++++|+|++.+.
T Consensus 6 ~~~vl~iD~SGSM~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vv~F~~~~~ 57 (174)
T d1yvra2 6 KRFLLAIDVSASMNQRVLGSILNASVVAAAMCMLVARTEKDSHMVAFSDEML 57 (174)
T ss_dssp CCEEEEEECSGGGGSBSTTSSCBHHHHHHHHHHHHHHHCSSEEEEEESSSEE
T ss_pred CeEEEEEECccccCCcccCccHHHHHHHHHHHHHhhccCCcEEEEEecCCcc
Confidence 4689999999752 223334334444444455567899999998753
No 33
>d2j9ub1 g.41.11.1 (B:115-161) Vacuolar protein-sorting-associated protein 36, VPS36 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=74.58 E-value=0.41 Score=34.11 Aligned_cols=20 Identities=35% Similarity=0.890 Sum_probs=16.8
Q ss_pred CEEEEccCCCcCCCCccccC
Q 002992 216 GQWQCVICRNLNGSEGEYVA 235 (860)
Q Consensus 216 ~~W~C~~C~~~N~lp~~Y~~ 235 (860)
.+|.|++|...|++..++..
T Consensus 2 s~W~CPICm~~Ne~~~e~~~ 21 (47)
T d2j9ub1 2 STWVCPICMVSNETQGEFTK 21 (47)
T ss_dssp EEEECTTTCCEEEESSCCCT
T ss_pred cceecceeeeeccceeeecc
Confidence 47999999999998877644
No 34
>d1y0ja1 g.39.1.1 (A:200-238) Erythroid transcription factor GATA-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=56.66 E-value=2 Score=29.72 Aligned_cols=30 Identities=27% Similarity=0.475 Sum_probs=25.7
Q ss_pred CcccCCCccccccceEEEcCCCEEEEccCCC
Q 002992 195 PHRCHNCGAFANIYCKILLGSGQWQCVICRN 225 (860)
Q Consensus 195 pvRC~~C~AYiNPf~~~~~~~~~W~C~~C~~ 225 (860)
..+|.+|++---|..+-...|+ -.||-|+-
T Consensus 2 ~r~C~~Cgtt~Tp~WR~gp~G~-~LCNACGl 31 (39)
T d1y0ja1 2 ARECVNCGATATPLWRRDRTGH-YLCNACGL 31 (39)
T ss_dssp CCCCSSSCCCCCSCCEECTTSC-EECSSHHH
T ss_pred cCCCCCCCCCCCcccccCCCCC-EeeHHhHH
Confidence 4689999999999999988775 59999984
No 35
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=44.31 E-value=3.2 Score=34.99 Aligned_cols=36 Identities=19% Similarity=0.370 Sum_probs=27.5
Q ss_pred CCcccCCCccccccceEEEcCCCEEEEccCCCcCCCCcccc
Q 002992 194 DPHRCHNCGAFANIYCKILLGSGQWQCVICRNLNGSEGEYV 234 (860)
Q Consensus 194 ~pvRC~~C~AYiNPf~~~~~~~~~W~C~~C~~~N~lp~~Y~ 234 (860)
.|++|++|+-..+ +.-++-=+|+-|+..+--|+.|.
T Consensus 66 ~Pp~CrkCGfvFr-----~~~kkPSRCP~CKSE~Ie~P~F~ 101 (105)
T d2gmga1 66 KPAQCRKCGFVFK-----AEINIPSRCPKCKSEWIEEPRFK 101 (105)
T ss_dssp CCCBBTTTCCBCC-----CCSSCCSSCSSSCCCCBCCCCEE
T ss_pred eChhhhhcCCeec-----ccCCCCCCCCCCCCccccCCcee
Confidence 6899999997543 23456788999999888777663
No 36
>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}
Probab=39.24 E-value=2.2 Score=30.50 Aligned_cols=29 Identities=21% Similarity=0.465 Sum_probs=13.9
Q ss_pred ccCCCccccccc----eEEEcCCCEEEEccCCC
Q 002992 197 RCHNCGAFANIY----CKILLGSGQWQCVICRN 225 (860)
Q Consensus 197 RC~~C~AYiNPf----~~~~~~~~~W~C~~C~~ 225 (860)
+|+.|+=..+|- ..|+.--..|+|+.|+.
T Consensus 5 ~C~~CgyiYd~~~Gdgt~Fe~LP~dw~CP~C~a 37 (45)
T d6rxna_ 5 VCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGV 37 (45)
T ss_dssp EETTTCCEECGGGGTTCCGGGSCTTCBCTTTCC
T ss_pred EeCCCCeEECcccCCCCCHHHCCCCCCCcCCCC
Confidence 566665443432 12222234566666664
No 37
>d1brfa_ g.41.5.1 (A:) Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=33.67 E-value=3.1 Score=30.83 Aligned_cols=11 Identities=36% Similarity=1.150 Sum_probs=6.7
Q ss_pred CCEEEEccCCC
Q 002992 215 SGQWQCVICRN 225 (860)
Q Consensus 215 ~~~W~C~~C~~ 225 (860)
-..|+|+.|+.
T Consensus 33 P~dw~CP~C~a 43 (53)
T d1brfa_ 33 PDDWVCPICGA 43 (53)
T ss_dssp CTTCBCTTTCC
T ss_pred CCCCCCcCCCC
Confidence 35666666664
No 38
>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=32.42 E-value=8.2 Score=26.09 Aligned_cols=13 Identities=23% Similarity=0.516 Sum_probs=11.3
Q ss_pred CCCEEEEccCCCc
Q 002992 214 GSGQWQCVICRNL 226 (860)
Q Consensus 214 ~~~~W~C~~C~~~ 226 (860)
.++.|+|..||+.
T Consensus 2 ~~~~~vC~vCGyi 14 (36)
T d1yuza2 2 DDKFHLCPICGYI 14 (36)
T ss_dssp SCCEEECSSSCCE
T ss_pred CCCEEECCCCCCE
Confidence 4689999999986
No 39
>d2vuti1 g.39.1.1 (I:671-712) Erythroid transcription factor GATA-1 {Emericella nidulans [TaxId: 162425]}
Probab=32.11 E-value=5.5 Score=27.90 Aligned_cols=29 Identities=17% Similarity=0.250 Sum_probs=25.0
Q ss_pred ccCCCccccccceEEEcCCCEEEEccCCCc
Q 002992 197 RCHNCGAFANIYCKILLGSGQWQCVICRNL 226 (860)
Q Consensus 197 RC~~C~AYiNPf~~~~~~~~~W~C~~C~~~ 226 (860)
.|.+|++---|..+-...|+ -.||-|+-.
T Consensus 2 ~C~nC~tt~Tp~WRr~~~G~-~lCNACGl~ 30 (42)
T d2vuti1 2 TCTNCFTQTTPLWRRNPEGQ-PLCNACGLF 30 (42)
T ss_dssp CCSSSCCCCCSCCEECTTSC-EECHHHHHH
T ss_pred cCCCCCCCCCccceeCCCCC-CchhhhhHH
Confidence 49999999999999998875 599999853
No 40
>d2akla2 g.41.3.5 (A:3-40) Hypothetical protein PA0128, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=30.05 E-value=15 Score=24.96 Aligned_cols=27 Identities=19% Similarity=0.410 Sum_probs=19.9
Q ss_pred CcccCCCccccccceEEEcCCCEEEEccCCCc
Q 002992 195 PHRCHNCGAFANIYCKILLGSGQWQCVICRNL 226 (860)
Q Consensus 195 pvRC~~C~AYiNPf~~~~~~~~~W~C~~C~~~ 226 (860)
.+.|.+|+. -|.-- +|..|+|+-|++.
T Consensus 3 lP~CP~C~s---eytYe--dg~l~vCPeC~hE 29 (38)
T d2akla2 3 LPPCPQCNS---EYTYE--DGALLVCPECAHE 29 (38)
T ss_dssp SCCCTTTCC---CCCEE--CSSSEEETTTTEE
T ss_pred CCcCCCCCC---cceEc--CCCEEECCcccCc
Confidence 467999986 33333 4789999999975
No 41
>d2avue1 e.64.1.1 (E:5-160) Flagellar transcriptional activator FlhC {Escherichia coli [TaxId: 562]}
Probab=29.46 E-value=5.2 Score=36.20 Aligned_cols=27 Identities=26% Similarity=0.767 Sum_probs=19.2
Q ss_pred CCcccCCCcc-ccccceEEEcCCCEEEEccC
Q 002992 194 DPHRCHNCGA-FANIYCKILLGSGQWQCVIC 223 (860)
Q Consensus 194 ~pvRC~~C~A-YiNPf~~~~~~~~~W~C~~C 223 (860)
...+|++|++ |+ ....+....++|+||
T Consensus 129 ~l~~C~~C~g~fv---~~~~~~~~~~~Cp~C 156 (156)
T d2avue1 129 QLSSCNCCGGNFI---THAHQPVGSFACSLC 156 (156)
T ss_dssp EEEECTTTCCEEE---EESSCCSSCCCCTTC
T ss_pred eecccCCCCCcee---cccccCCcCCcCCCC
Confidence 4689999997 33 122344688999999
No 42
>d2dsxa1 g.41.5.1 (A:1-52) Rubredoxin {Desulfovibrio gigas [TaxId: 879]}
Probab=28.53 E-value=4.2 Score=29.93 Aligned_cols=11 Identities=27% Similarity=1.162 Sum_probs=6.8
Q ss_pred CCEEEEccCCC
Q 002992 215 SGQWQCVICRN 225 (860)
Q Consensus 215 ~~~W~C~~C~~ 225 (860)
-..|+|+.|+.
T Consensus 34 P~~w~CP~C~a 44 (52)
T d2dsxa1 34 PDDWACPVCGA 44 (52)
T ss_dssp CTTCBCTTTCC
T ss_pred CCCCCCcCCCC
Confidence 35666666664
No 43
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=27.09 E-value=9.6 Score=32.84 Aligned_cols=32 Identities=22% Similarity=0.547 Sum_probs=24.1
Q ss_pred cccCCCccccccceEEEc----CCCEEEEccCCCcC
Q 002992 196 HRCHNCGAFANIYCKILL----GSGQWQCVICRNLN 227 (860)
Q Consensus 196 vRC~~C~AYiNPf~~~~~----~~~~W~C~~C~~~N 227 (860)
..|.+|+.++..-|.... +...|.|.+|...-
T Consensus 66 ~~C~~C~~~~C~~C~~~~~~~~~~~~w~C~~C~k~r 101 (124)
T d1zbdb_ 66 VVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQR 101 (124)
T ss_dssp EECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHHH
T ss_pred CcCccCCcccccCCCCCccCCCCCCCEECccCcchH
Confidence 468888888888887663 33459999998653
No 44
>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}
Probab=26.62 E-value=4.8 Score=29.73 Aligned_cols=10 Identities=30% Similarity=1.149 Sum_probs=5.2
Q ss_pred CEEEEccCCC
Q 002992 216 GQWQCVICRN 225 (860)
Q Consensus 216 ~~W~C~~C~~ 225 (860)
..|+|+.|+.
T Consensus 35 ~dw~CP~C~a 44 (53)
T d1iroa_ 35 DDWVCPLCGV 44 (53)
T ss_dssp TTCBCTTTCC
T ss_pred CCCCCcCCCC
Confidence 4455555553
No 45
>d3gata_ g.39.1.1 (A:) Erythroid transcription factor GATA-1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=25.05 E-value=9.2 Score=29.41 Aligned_cols=29 Identities=17% Similarity=0.275 Sum_probs=25.4
Q ss_pred cccCCCccccccceEEEcCCCEEEEccCCC
Q 002992 196 HRCHNCGAFANIYCKILLGSGQWQCVICRN 225 (860)
Q Consensus 196 vRC~~C~AYiNPf~~~~~~~~~W~C~~C~~ 225 (860)
..|.+|++---|...-+..| ...||-||-
T Consensus 5 ~~C~nCgt~~Tp~WRr~~~G-~~lCNACGl 33 (66)
T d3gata_ 5 TVCSNCQTSTTTLWRRSPMG-DPVCNACGL 33 (66)
T ss_dssp CCCTTTCCCCCSSEEECTTS-CEEEHHHHH
T ss_pred CCCCCCCCCCCcccccCCCC-CcccchhHH
Confidence 46999999999999999877 479999974
No 46
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=24.29 E-value=12 Score=25.30 Aligned_cols=13 Identities=23% Similarity=0.537 Sum_probs=11.1
Q ss_pred CCEEEEccCCCcC
Q 002992 215 SGQWQCVICRNLN 227 (860)
Q Consensus 215 ~~~W~C~~C~~~N 227 (860)
.+.|+|..||+.-
T Consensus 3 ~~~~~C~vCG~i~ 15 (37)
T d1nnqa2 3 KKVYICPICGYTA 15 (37)
T ss_dssp SCEEECTTTCCEE
T ss_pred CcEEECCCCCCEe
Confidence 5789999999874
No 47
>d1s24a_ g.41.5.1 (A:) Two-iron rubredoxin {Pseudomonas oleovorans [TaxId: 301]}
Probab=23.32 E-value=5.3 Score=29.80 Aligned_cols=10 Identities=30% Similarity=1.169 Sum_probs=5.1
Q ss_pred CEEEEccCCC
Q 002992 216 GQWQCVICRN 225 (860)
Q Consensus 216 ~~W~C~~C~~ 225 (860)
++|+|..|+.
T Consensus 3 kky~C~~Cgy 12 (56)
T d1s24a_ 3 LKWICITCGH 12 (56)
T ss_dssp CEEEETTTTE
T ss_pred ccEECCCCCc
Confidence 3455555553
No 48
>d1ibia1 g.39.1.3 (A:117-144) Cysteine-rich (intestinal) protein, CRP, CRIP {Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]}
Probab=21.68 E-value=24 Score=21.99 Aligned_cols=22 Identities=23% Similarity=0.614 Sum_probs=17.6
Q ss_pred ccCCCccccccceEEEcCCCEE
Q 002992 197 RCHNCGAFANIYCKILLGSGQW 218 (860)
Q Consensus 197 RC~~C~AYiNPf~~~~~~~~~W 218 (860)
+|.||+--+-.--++.-.|+.|
T Consensus 3 ~CpRC~~~VyaAEkviGaG~~W 24 (28)
T d1ibia1 3 KCSRCGDSVYAAEKVIGAGKPW 24 (28)
T ss_dssp ECTTTSSEESSSSCEESSSSEE
T ss_pred cCcccchhHHHHHHHhcCCCcc
Confidence 6889988777777787777877
No 49
>d1dx8a_ g.41.5.1 (A:) Rubredoxin {Guillardia theta [TaxId: 55529]}
Probab=20.68 E-value=8.9 Score=29.84 Aligned_cols=11 Identities=36% Similarity=0.942 Sum_probs=6.3
Q ss_pred CCEEEEccCCC
Q 002992 215 SGQWQCVICRN 225 (860)
Q Consensus 215 ~~~W~C~~C~~ 225 (860)
-..|+|+.|+.
T Consensus 38 P~dW~CP~Cga 48 (70)
T d1dx8a_ 38 SDSFMCPACRS 48 (70)
T ss_dssp CTTCBCTTTCC
T ss_pred CCCCCCcCCCC
Confidence 35566666664
Done!