Query 002995
Match_columns 860
No_of_seqs 699 out of 2771
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 09:25:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002995.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002995hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w5y_A Histone-lysine N-methyl 100.0 3E-37 1E-41 310.9 15.5 156 679-836 35-192 (192)
2 3h6l_A Histone-lysine N-methyl 100.0 1.2E-36 4E-41 323.6 16.8 158 682-840 103-261 (278)
3 3ooi_A Histone-lysine N-methyl 100.0 4.2E-36 1.5E-40 312.8 14.3 154 682-836 78-232 (232)
4 3ope_A Probable histone-lysine 100.0 1E-35 3.5E-40 308.3 15.6 158 681-840 58-218 (222)
5 2wzo_A Transforming growth fac 100.0 7.8E-34 2.7E-38 273.6 12.8 142 222-375 1-144 (146)
6 3bo5_A Histone-lysine N-methyl 100.0 1.1E-33 3.7E-38 303.5 15.4 155 681-838 111-288 (290)
7 1mvh_A Cryptic LOCI regulator 100.0 2.6E-33 9E-38 301.8 12.0 153 682-837 123-299 (299)
8 1ml9_A Histone H3 methyltransf 100.0 2.9E-33 1E-37 303.0 11.7 152 683-835 120-301 (302)
9 2r3a_A Histone-lysine N-methyl 100.0 3.6E-33 1.2E-37 300.2 12.2 152 682-836 126-300 (300)
10 3hna_A Histone-lysine N-methyl 100.0 7.2E-33 2.5E-37 296.4 7.4 143 683-834 134-287 (287)
11 3f9x_A Histone-lysine N-methyl 100.0 5.7E-30 2E-34 254.1 14.5 135 683-818 17-155 (166)
12 2f69_A Histone-lysine N-methyl 99.9 1.7E-25 5.6E-30 236.0 12.5 118 695-819 108-236 (261)
13 2qpw_A PR domain zinc finger p 99.9 2E-25 6.7E-30 215.4 10.3 124 679-818 12-146 (149)
14 1n3j_A A612L, histone H3 lysin 99.9 7.7E-26 2.6E-30 211.4 6.5 109 695-819 3-111 (119)
15 1h3i_A Histone H3 lysine 4 spe 99.9 2.2E-24 7.6E-29 233.4 13.0 118 695-819 162-290 (293)
16 3s8p_A Histone-lysine N-methyl 99.9 4.9E-25 1.7E-29 230.7 3.7 133 696-836 131-269 (273)
17 2daq_A WHSC1L1 protein, isofor 99.9 2.5E-23 8.5E-28 191.0 7.4 102 76-178 3-105 (110)
18 3qby_A Hepatoma-derived growth 99.9 6.3E-23 2.2E-27 181.7 6.9 84 80-170 4-87 (94)
19 4fu6_A PC4 and SFRS1-interacti 99.9 4.6E-23 1.6E-27 200.3 5.1 86 80-172 21-106 (153)
20 1ri0_A Hepatoma-derived growth 99.9 4.6E-22 1.6E-26 181.3 8.1 89 75-170 13-101 (110)
21 2l89_A PWWP domain-containing 99.9 9.1E-23 3.1E-27 185.6 2.8 94 78-172 2-97 (108)
22 2gfu_A DNA mismatch repair pro 99.9 4.2E-22 1.4E-26 189.1 6.7 101 77-179 18-123 (134)
23 3llr_A DNA (cytosine-5)-methyl 99.8 9E-22 3.1E-26 188.3 7.6 94 74-173 9-104 (154)
24 3rq4_A Histone-lysine N-methyl 99.8 1.4E-21 4.8E-26 202.8 5.3 127 696-833 103-235 (247)
25 1h3z_A Hypothetical 62.8 kDa p 99.8 2.4E-21 8.1E-26 177.3 5.1 94 79-173 4-101 (109)
26 1khc_A DNA cytosine-5 methyltr 99.8 1E-20 3.4E-25 181.0 7.1 94 75-174 5-100 (147)
27 3pfs_A Bromodomain and PHD fin 99.8 4.9E-19 1.7E-23 168.0 6.1 93 77-169 32-146 (158)
28 3ep0_A PR domain zinc finger p 99.8 2E-18 7E-23 169.2 10.7 113 693-818 24-148 (170)
29 3l42_A Peregrin; transcription 99.7 3.8E-18 1.3E-22 156.7 8.0 95 80-174 4-124 (130)
30 3dal_A PR domain zinc finger p 99.7 1.4E-17 4.6E-22 166.6 8.4 127 691-835 53-190 (196)
31 3db5_A PR domain zinc finger p 99.7 3.1E-17 1.1E-21 158.8 10.0 116 692-818 19-144 (151)
32 3ray_A PR domain-containing pr 99.5 2.6E-15 9E-20 153.0 6.0 132 691-840 67-208 (237)
33 2lq6_A Bromodomain-containing 99.5 5.2E-15 1.8E-19 128.5 4.4 75 501-580 10-85 (87)
34 3ihx_A PR domain zinc finger p 99.4 7.9E-14 2.7E-18 134.5 6.3 105 693-816 20-141 (152)
35 2ku3_A Bromodomain-containing 98.9 5.4E-10 1.8E-14 93.0 2.7 52 394-446 14-65 (71)
36 2l43_A N-teminal domain from h 98.7 2.8E-09 9.6E-14 92.8 2.1 53 394-447 23-75 (88)
37 2yt5_A Metal-response element- 98.6 2.7E-08 9.1E-13 82.0 3.2 54 394-448 4-62 (66)
38 3n71_A Histone lysine methyltr 98.5 4.7E-08 1.6E-12 112.7 3.7 60 770-833 200-281 (490)
39 3qwp_A SET and MYND domain-con 98.5 3.7E-08 1.3E-12 111.9 2.2 61 769-833 200-269 (429)
40 1wev_A Riken cDNA 1110020M19; 98.4 7.4E-08 2.5E-12 83.9 2.9 51 395-446 15-71 (88)
41 3qww_A SET and MYND domain-con 98.4 1.4E-07 4.7E-12 107.1 3.6 53 770-826 201-264 (433)
42 2ysm_A Myeloid/lymphoid or mix 98.3 8.1E-07 2.8E-11 81.1 6.0 50 394-445 5-55 (111)
43 4gne_A Histone-lysine N-methyl 98.3 9.9E-07 3.4E-11 79.1 6.3 74 394-473 13-96 (107)
44 1f62_A Transcription factor WS 98.2 4.8E-07 1.6E-11 70.3 3.3 46 398-446 2-49 (51)
45 2kwj_A Zinc finger protein DPF 98.1 1.1E-06 3.7E-11 80.5 3.6 48 397-445 2-59 (114)
46 3v43_A Histone acetyltransfera 98.1 1.1E-06 3.9E-11 80.2 3.6 49 396-445 5-62 (112)
47 1xwh_A Autoimmune regulator; P 98.1 1.8E-06 6.2E-11 70.8 3.7 49 394-448 6-56 (66)
48 1mm2_A MI2-beta; PHD, zinc fin 98.1 1.8E-06 6.2E-11 69.6 3.4 48 394-447 7-56 (61)
49 2e6r_A Jumonji/ARID domain-con 98.1 1.7E-06 6E-11 75.8 3.2 50 394-446 14-65 (92)
50 2yql_A PHD finger protein 21A; 98.0 2.2E-06 7.6E-11 67.9 3.2 47 394-446 7-55 (56)
51 2lri_C Autoimmune regulator; Z 98.0 2.4E-06 8.2E-11 69.9 3.4 47 396-448 12-60 (66)
52 2e6s_A E3 ubiquitin-protein li 98.0 3.8E-06 1.3E-10 70.9 4.2 48 397-446 27-76 (77)
53 3asl_A E3 ubiquitin-protein li 98.0 3.6E-06 1.2E-10 69.8 3.7 47 398-446 20-68 (70)
54 2puy_A PHD finger protein 21A; 98.0 3.1E-06 1.1E-10 68.1 3.1 46 395-446 4-51 (60)
55 1fp0_A KAP-1 corepressor; PHD 98.0 5.4E-06 1.9E-10 71.3 4.5 48 394-447 23-72 (88)
56 2l5u_A Chromodomain-helicase-D 97.9 4.5E-06 1.5E-10 67.3 3.2 47 394-446 9-57 (61)
57 3shb_A E3 ubiquitin-protein li 97.9 5.3E-06 1.8E-10 69.9 3.3 47 398-446 28-76 (77)
58 1wen_A Inhibitor of growth fam 97.7 2.8E-05 9.6E-10 64.5 5.0 50 394-448 14-66 (71)
59 2lv9_A Histone-lysine N-methyl 97.7 3.1E-05 1.1E-09 68.7 4.4 49 396-447 28-76 (98)
60 3c6w_A P28ING5, inhibitor of g 97.5 2.5E-05 8.7E-10 62.3 2.0 48 394-446 7-57 (59)
61 2vnf_A ING 4, P29ING4, inhibit 97.5 2.5E-05 8.5E-10 62.7 1.7 47 395-446 9-58 (60)
62 2k16_A Transcription initiatio 97.5 2.8E-05 9.7E-10 65.5 2.1 51 395-447 17-68 (75)
63 3ask_A E3 ubiquitin-protein li 97.5 5.4E-05 1.8E-09 76.6 3.6 48 397-446 175-224 (226)
64 1weu_A Inhibitor of growth fam 97.5 8.7E-05 3E-09 64.4 4.4 50 394-448 34-86 (91)
65 2g6q_A Inhibitor of growth pro 97.4 4.2E-05 1.4E-09 61.7 1.9 48 395-447 10-60 (62)
66 3u5n_A E3 ubiquitin-protein li 97.4 8.3E-05 2.9E-09 75.5 4.3 49 394-448 5-55 (207)
67 3o36_A Transcription intermedi 97.4 8.1E-05 2.8E-09 74.2 4.0 48 395-448 3-52 (184)
68 2kwj_A Zinc finger protein DPF 97.4 7.3E-05 2.5E-09 68.3 2.9 47 397-446 59-107 (114)
69 2jmi_A Protein YNG1, ING1 homo 97.3 7E-05 2.4E-09 64.8 2.4 48 394-446 24-75 (90)
70 3o70_A PHD finger protein 13; 97.3 0.00015 5.1E-09 59.6 3.7 50 395-447 18-67 (68)
71 2ro1_A Transcription intermedi 97.2 0.0001 3.5E-09 73.6 2.4 46 396-447 2-49 (189)
72 3v43_A Histone acetyltransfera 97.2 0.00019 6.4E-09 65.4 3.8 48 397-446 62-111 (112)
73 2ysm_A Myeloid/lymphoid or mix 97.2 0.0002 7E-09 65.0 3.6 46 398-446 56-103 (111)
74 3pmi_A PWWP domain-containing 97.1 0.00018 6.2E-09 64.4 2.6 66 80-156 3-73 (134)
75 2rsd_A E3 SUMO-protein ligase 96.7 0.00075 2.6E-08 55.5 2.7 48 396-446 10-64 (68)
76 1wew_A DNA-binding family prot 96.6 0.00097 3.3E-08 56.4 3.0 51 395-448 15-73 (78)
77 1we9_A PHD finger family prote 96.6 0.0015 5.2E-08 52.9 3.9 53 394-447 4-58 (64)
78 3o7a_A PHD finger protein 13 v 96.5 0.0013 4.6E-08 50.9 2.9 45 400-446 7-51 (52)
79 1x4i_A Inhibitor of growth pro 96.4 0.00079 2.7E-08 55.6 1.3 47 395-446 5-54 (70)
80 3qxy_A N-lysine methyltransfer 96.3 0.0024 8.1E-08 72.6 4.4 44 769-816 221-264 (449)
81 1wee_A PHD finger family prote 96.1 0.0035 1.2E-07 52.1 3.5 50 396-447 16-66 (72)
82 1wep_A PHF8; structural genomi 95.9 0.0029 1E-07 53.6 2.2 50 396-447 12-63 (79)
83 2vpb_A Hpygo1, pygopus homolog 95.9 0.002 7E-08 52.3 1.0 49 395-445 7-64 (65)
84 1wem_A Death associated transc 95.8 0.003 1E-07 53.1 1.9 49 396-447 16-70 (76)
85 2kgg_A Histone demethylase jar 95.8 0.0034 1.2E-07 48.6 1.8 47 398-445 4-52 (52)
86 2h21_A Ribulose-1,5 bisphospha 95.6 0.0046 1.6E-07 70.1 2.9 47 770-816 189-242 (440)
87 3qii_A PHD finger protein 20; 95.5 0.014 4.7E-07 49.4 4.7 57 78-147 18-74 (85)
88 2xb1_A Pygopus homolog 2, B-ce 95.3 0.006 2.1E-07 54.6 2.0 49 397-447 4-61 (105)
89 2ri7_A Nucleosome-remodeling f 95.2 0.0029 9.9E-08 62.2 -0.6 50 395-446 7-58 (174)
90 2lbm_A Transcriptional regulat 95.1 0.0084 2.9E-07 56.3 2.3 46 395-446 62-116 (142)
91 3p8d_A Medulloblastoma antigen 95.0 0.027 9.2E-07 45.6 4.8 56 79-147 4-59 (67)
92 3smt_A Histone-lysine N-methyl 94.7 0.016 5.4E-07 66.6 3.9 43 770-815 272-314 (497)
93 3kqi_A GRC5, PHD finger protei 94.4 0.01 3.4E-07 49.7 1.0 48 398-446 11-60 (75)
94 3lqh_A Histone-lysine N-methyl 93.8 0.017 5.9E-07 56.8 1.5 51 397-447 3-63 (183)
95 3h8z_A FragIle X mental retard 93.6 0.094 3.2E-06 48.2 5.9 98 3-147 16-120 (128)
96 3ql9_A Transcriptional regulat 93.2 0.026 8.9E-07 52.1 1.5 47 395-446 56-110 (129)
97 2yrv_A AT-rich interactive dom 93.2 0.12 4E-06 46.1 5.5 89 84-182 13-103 (117)
98 1wew_A DNA-binding family prot 91.9 0.068 2.3E-06 45.0 2.3 31 507-538 15-47 (78)
99 2f5k_A MORF-related gene 15 is 91.3 0.23 7.9E-06 43.7 5.1 63 75-147 16-80 (102)
100 1wil_A KIAA1045 protein; ring 91.3 0.056 1.9E-06 45.2 1.0 49 395-446 14-75 (89)
101 4a4f_A SurviVal of motor neuro 91.3 0.29 9.8E-06 39.4 5.2 58 78-146 5-63 (64)
102 1we9_A PHD finger family prote 90.6 0.1 3.5E-06 41.9 2.0 28 509-538 7-37 (64)
103 3pur_A Lysine-specific demethy 90.3 0.13 4.6E-06 58.1 3.3 36 411-446 56-93 (528)
104 2rsd_A E3 SUMO-protein ligase 90.1 0.099 3.4E-06 42.7 1.5 29 509-538 11-41 (68)
105 1wep_A PHF8; structural genomi 89.8 0.13 4.3E-06 43.4 1.9 28 508-538 12-42 (79)
106 1wee_A PHD finger family prote 88.6 0.15 5E-06 42.1 1.5 30 507-539 15-47 (72)
107 2g6q_A Inhibitor of growth pro 88.5 0.19 6.7E-06 40.1 2.1 30 509-539 12-43 (62)
108 3s6w_A Tudor domain-containing 87.4 0.74 2.5E-05 35.5 4.8 53 81-144 1-54 (54)
109 1mhn_A SurviVal motor neuron p 87.4 0.77 2.6E-05 36.1 4.9 56 80-146 2-58 (59)
110 4hcz_A PHD finger protein 1; p 87.2 0.61 2.1E-05 36.1 4.0 54 80-145 2-55 (58)
111 2d9t_A Tudor domain-containing 86.9 0.81 2.8E-05 38.3 5.1 59 79-148 7-66 (78)
112 3pnw_C Tudor domain-containing 86.8 0.53 1.8E-05 39.3 3.8 59 78-147 14-73 (77)
113 1wem_A Death associated transc 86.8 0.27 9.2E-06 41.0 2.1 27 509-538 17-45 (76)
114 3o70_A PHD finger protein 13; 86.2 0.29 9.9E-06 39.9 1.9 28 509-539 20-49 (68)
115 2ldm_A Uncharacterized protein 85.9 0.15 5.2E-06 42.8 0.0 55 80-147 5-59 (81)
116 3o7a_A PHD finger protein 13 v 85.6 0.35 1.2E-05 37.1 2.0 28 510-539 5-34 (52)
117 2equ_A PHD finger protein 20-l 85.1 1.4 4.9E-05 36.3 5.6 56 79-147 7-62 (74)
118 3c6w_A P28ING5, inhibitor of g 84.9 0.4 1.4E-05 37.9 2.0 30 509-539 10-41 (59)
119 3kv4_A PHD finger protein 8; e 84.7 0.14 4.9E-06 57.4 -0.9 49 397-446 5-55 (447)
120 2xb1_A Pygopus homolog 2, B-ce 84.2 0.39 1.3E-05 42.7 2.0 29 509-538 4-35 (105)
121 1wen_A Inhibitor of growth fam 84.1 0.4 1.4E-05 39.4 1.8 31 508-539 16-48 (71)
122 2kgg_A Histone demethylase jar 84.0 0.37 1.3E-05 36.9 1.5 28 510-538 4-34 (52)
123 3kv5_D JMJC domain-containing 83.4 0.24 8.2E-06 56.3 0.3 48 398-446 38-87 (488)
124 1weu_A Inhibitor of growth fam 83.3 0.38 1.3E-05 41.5 1.4 31 508-539 36-68 (91)
125 2vnf_A ING 4, P29ING4, inhibit 82.6 0.56 1.9E-05 37.1 2.0 30 509-539 11-42 (60)
126 2lv9_A Histone-lysine N-methyl 82.5 0.47 1.6E-05 41.6 1.7 26 510-538 30-57 (98)
127 2vpb_A Hpygo1, pygopus homolog 82.4 0.49 1.7E-05 38.2 1.6 28 510-538 10-40 (65)
128 2k16_A Transcription initiatio 82.3 0.48 1.7E-05 39.2 1.6 29 509-539 19-49 (75)
129 2jmi_A Protein YNG1, ING1 homo 81.9 0.56 1.9E-05 40.3 1.9 30 508-538 26-57 (90)
130 4bbq_A Lysine-specific demethy 81.9 0.94 3.2E-05 40.9 3.6 75 398-487 9-98 (117)
131 2eqj_A Metal-response element- 81.8 2.4 8.4E-05 33.8 5.4 54 80-145 12-65 (66)
132 2l5u_A Chromodomain-helicase-D 81.5 0.57 2E-05 37.2 1.7 30 508-540 11-40 (61)
133 2lrq_A Protein MRG15, NUA4 com 82.0 0.31 1.1E-05 41.5 0.0 59 79-147 10-70 (85)
134 2puy_A PHD finger protein 21A; 81.0 0.59 2E-05 36.9 1.6 28 509-539 6-33 (60)
135 1g5v_A SurviVal motor neuron p 80.3 2.2 7.7E-05 36.4 5.1 57 80-147 9-66 (88)
136 4bbq_A Lysine-specific demethy 80.2 0.98 3.4E-05 40.8 3.1 38 410-447 72-114 (117)
137 2zet_C Melanophilin; complex, 80.1 0.97 3.3E-05 43.0 3.1 50 396-447 68-117 (153)
138 2lri_C Autoimmune regulator; Z 79.7 0.55 1.9E-05 38.0 1.1 28 509-539 13-40 (66)
139 2lcc_A AT-rich interactive dom 79.6 1.2 4.1E-05 37.0 3.1 60 79-147 3-67 (76)
140 2ri7_A Nucleosome-remodeling f 79.2 0.55 1.9E-05 45.7 1.1 28 508-538 8-38 (174)
141 2yql_A PHD finger protein 21A; 79.0 0.69 2.4E-05 36.0 1.4 29 509-540 10-38 (56)
142 1xwh_A Autoimmune regulator; P 79.0 0.72 2.5E-05 37.2 1.6 29 508-539 8-36 (66)
143 1mhn_A SurviVal motor neuron p 78.7 1.2 4.2E-05 34.9 2.8 33 3-35 19-52 (59)
144 3m9q_A Protein MALE-specific l 78.7 1.7 5.6E-05 38.2 3.8 65 79-147 17-87 (101)
145 3oa6_A MALE-specific lethal 3 78.6 1.1 3.6E-05 40.0 2.6 66 78-147 16-87 (110)
146 3s6w_A Tudor domain-containing 78.0 1.4 4.9E-05 33.8 2.9 33 3-35 17-50 (54)
147 2d8s_A Cellular modulator of i 77.6 1.2 4E-05 37.5 2.5 52 394-447 13-67 (80)
148 2xk0_A Polycomb protein PCL; t 76.6 4.6 0.00016 32.3 5.4 52 80-145 14-65 (69)
149 2eko_A Histone acetyltransfera 76.3 4.6 0.00016 34.4 5.8 57 77-142 5-67 (87)
150 3kqi_A GRC5, PHD finger protei 76.1 0.75 2.6E-05 38.1 0.9 26 511-538 12-40 (75)
151 2e5q_A PHD finger protein 19; 75.0 6.3 0.00021 30.9 5.6 56 78-145 4-59 (63)
152 1f62_A Transcription factor WS 74.9 1 3.5E-05 34.2 1.3 29 510-540 2-32 (51)
153 2a20_A Regulating synaptic mem 74.9 2.2 7.5E-05 33.1 3.1 51 394-445 7-58 (62)
154 1mm2_A MI2-beta; PHD, zinc fin 74.9 0.77 2.6E-05 36.4 0.6 29 508-539 9-37 (61)
155 1ptq_A Protein kinase C delta 73.2 2.1 7.3E-05 32.1 2.7 34 396-429 11-44 (50)
156 2m0o_A PHD finger protein 1; t 73.0 7.1 0.00024 31.9 5.7 52 80-143 25-76 (79)
157 1zbd_B Rabphilin-3A; G protein 72.6 2.7 9.1E-05 39.0 3.8 53 395-447 54-107 (134)
158 2eqm_A PHD finger protein 20-l 72.5 7.3 0.00025 33.2 6.2 58 78-146 16-77 (88)
159 3m9p_A MALE-specific lethal 3 71.6 1.8 6.3E-05 38.4 2.3 66 78-147 16-87 (110)
160 2equ_A PHD finger protein 20-l 71.3 2.9 0.0001 34.5 3.3 30 3-33 24-53 (74)
161 2yt5_A Metal-response element- 71.3 1.7 5.9E-05 34.8 1.9 30 509-540 7-40 (66)
162 3qww_A SET and MYND domain-con 71.2 2.4 8.3E-05 47.4 3.8 31 696-726 7-37 (433)
163 2e5p_A Protein PHF1, PHD finge 71.1 6.1 0.00021 31.4 4.8 57 78-146 6-62 (68)
164 4a4f_A SurviVal of motor neuro 71.0 2.5 8.7E-05 33.7 2.9 32 3-34 24-56 (64)
165 3n71_A Histone lysine methyltr 70.4 2.4 8.2E-05 48.3 3.6 33 695-727 6-38 (490)
166 3fdr_A Tudor and KH domain-con 70.0 5.3 0.00018 34.3 4.9 57 80-148 26-83 (94)
167 2l8d_A Lamin-B receptor; DNA b 69.9 5.5 0.00019 31.5 4.3 54 79-144 7-61 (66)
168 1weq_A PHD finger protein 7; s 69.6 12 0.00041 31.6 6.7 37 410-448 43-80 (85)
169 2enz_A NPKC-theta, protein kin 69.4 3.5 0.00012 32.9 3.4 34 396-429 23-56 (65)
170 2enn_A NPKC-theta, protein kin 69.1 3 0.0001 34.7 3.0 35 396-430 34-68 (77)
171 2yuu_A NPKC-delta, protein kin 68.9 4 0.00014 34.4 3.8 35 396-430 28-62 (83)
172 2dig_A Lamin-B receptor; tudor 68.6 5.8 0.0002 31.5 4.2 55 79-145 10-65 (68)
173 1wgs_A MYST histone acetyltran 67.9 4.3 0.00015 37.5 4.1 59 80-146 11-71 (133)
174 3uej_A NPKC-delta, protein kin 67.8 2.7 9.1E-05 33.6 2.3 34 396-429 20-53 (65)
175 1y8f_A UNC-13 homolog A, MUNC1 67.7 3.5 0.00012 33.1 3.0 34 396-429 24-57 (66)
176 3lqh_A Histone-lysine N-methyl 67.2 2.2 7.5E-05 41.8 2.1 28 509-538 3-36 (183)
177 2ro0_A Histone acetyltransfera 67.2 4.2 0.00014 35.0 3.6 57 76-142 18-76 (92)
178 3asl_A E3 ubiquitin-protein li 67.0 2.3 7.7E-05 34.7 1.8 28 510-539 20-49 (70)
179 4gne_A Histone-lysine N-methyl 66.7 2.5 8.7E-05 37.5 2.2 30 509-539 16-45 (107)
180 2l8d_A Lamin-B receptor; DNA b 66.3 4.5 0.00016 32.0 3.2 32 3-34 25-56 (66)
181 3p8d_A Medulloblastoma antigen 65.9 4.5 0.00015 32.6 3.2 30 3-33 21-50 (67)
182 2ku3_A Bromodomain-containing 65.7 2.8 9.5E-05 34.3 2.1 31 508-540 16-50 (71)
183 1x4i_A Inhibitor of growth pro 65.6 2.3 7.9E-05 34.7 1.5 29 510-539 8-38 (70)
184 2rnz_A Histone acetyltransfera 65.0 6.5 0.00022 33.9 4.3 55 78-142 22-78 (94)
185 2k3y_A Chromatin modification- 64.7 3.6 0.00012 38.0 2.8 67 80-147 8-105 (136)
186 2l43_A N-teminal domain from h 63.7 3.1 0.00011 35.5 2.1 30 509-540 26-59 (88)
187 4b6d_A RAC GTPase-activating p 63.3 4 0.00014 32.3 2.5 32 397-429 20-51 (61)
188 1g5v_A SurviVal motor neuron p 63.2 5.2 0.00018 34.1 3.4 33 3-35 26-59 (88)
189 1fp0_A KAP-1 corepressor; PHD 63.1 2.6 9.1E-05 35.9 1.5 29 509-540 26-54 (88)
190 1faq_A RAF-1; transferase, ser 63.1 3.8 0.00013 31.0 2.3 31 396-430 14-44 (52)
191 1wev_A Riken cDNA 1110020M19; 62.9 3.1 0.00011 35.5 1.9 30 508-539 16-49 (88)
192 2diq_A Tudor and KH domain-con 62.8 9.1 0.00031 33.9 5.1 56 80-147 31-87 (110)
193 2d9t_A Tudor domain-containing 62.8 4.8 0.00016 33.5 3.1 33 3-35 25-58 (78)
194 2e6s_A E3 ubiquitin-protein li 62.3 2.8 9.7E-05 34.9 1.5 28 510-539 28-57 (77)
195 2eli_A Protein kinase C alpha 62.0 5.9 0.0002 33.5 3.5 34 396-429 28-61 (85)
196 3rsn_A SET1/ASH2 histone methy 61.6 3.1 0.00011 40.2 1.9 27 511-539 7-36 (177)
197 3pnw_C Tudor domain-containing 61.4 5.9 0.0002 32.9 3.3 33 3-35 33-66 (77)
198 3qwp_A SET and MYND domain-con 60.9 5.5 0.00019 44.5 4.1 32 695-726 4-35 (429)
199 2ldm_A Uncharacterized protein 65.1 1.8 6E-05 36.4 0.0 31 3-34 21-51 (81)
200 2fnf_X Putative RAS effector N 60.8 5 0.00017 32.8 2.7 32 395-429 34-65 (72)
201 2dig_A Lamin-B receptor; tudor 60.3 6.6 0.00023 31.2 3.1 32 3-34 28-59 (68)
202 3e9g_A Chromatin modification- 60.2 11 0.00039 34.1 5.2 67 80-147 6-103 (130)
203 3qii_A PHD finger protein 20; 60.1 6.3 0.00022 33.2 3.2 30 3-33 36-65 (85)
204 3mp6_A MBP, SGF29, maltose-bin 59.7 20 0.00068 40.8 8.7 105 2-145 405-513 (522)
205 2e6r_A Jumonji/ARID domain-con 59.7 3.1 0.00011 35.9 1.4 29 509-539 17-47 (92)
206 3rsn_A SET1/ASH2 histone methy 58.2 7.1 0.00024 37.7 3.7 44 402-446 10-58 (177)
207 2db6_A SH3 and cysteine rich d 58.1 2.4 8.3E-05 34.9 0.4 35 396-430 28-62 (74)
208 1wil_A KIAA1045 protein; ring 56.2 2.9 0.0001 35.0 0.6 34 509-544 16-50 (89)
209 3k1l_B Fancl; UBC, ring, RWD, 55.5 4.1 0.00014 43.6 1.7 35 395-429 307-344 (381)
210 3pfq_A PKC-B, PKC-beta, protei 55.2 3.9 0.00013 48.5 1.6 34 396-429 48-81 (674)
211 3o36_A Transcription intermedi 54.7 3.9 0.00013 40.0 1.3 27 509-538 5-31 (184)
212 3u5n_A E3 ubiquitin-protein li 54.6 4.7 0.00016 40.2 1.9 28 509-539 8-35 (207)
213 1r79_A Diacylglycerol kinase, 54.5 6.4 0.00022 33.3 2.4 34 397-430 39-73 (84)
214 3sd4_A PHD finger protein 20; 53.8 20 0.00068 28.9 5.2 52 78-140 9-62 (69)
215 3kv4_A PHD finger protein 8; e 53.4 3.5 0.00012 46.1 0.8 27 510-538 6-35 (447)
216 3mea_A SAGA-associated factor 53.3 54 0.0018 31.7 9.0 110 2-146 62-178 (180)
217 3dlm_A Histone-lysine N-methyl 52.6 15 0.00051 36.4 5.0 116 2-144 85-209 (213)
218 2bud_A Males-absent on the fir 51.7 13 0.00043 31.9 3.8 59 83-147 16-76 (92)
219 1iym_A EL5; ring-H2 finger, ub 51.3 12 0.00042 27.9 3.5 34 395-429 4-37 (55)
220 1rfh_A RAS association (ralgds 51.2 4.9 0.00017 31.5 1.1 32 395-429 21-52 (59)
221 2g3r_A Tumor suppressor P53-bi 50.0 7.5 0.00025 34.8 2.2 91 3-145 20-110 (123)
222 2ecl_A Ring-box protein 2; RNF 49.2 8 0.00027 32.1 2.2 35 395-429 14-58 (81)
223 1weo_A Cellulose synthase, cat 48.4 7 0.00024 33.0 1.6 50 395-446 15-66 (93)
224 1kbe_A Kinase suppressor of RA 48.0 9.9 0.00034 28.6 2.3 29 397-429 15-43 (49)
225 3smt_A Histone-lysine N-methyl 47.8 11 0.00039 42.7 3.9 33 696-728 93-125 (497)
226 1vyx_A ORF K3, K3RING; zinc-bi 47.5 2 6.9E-05 33.8 -1.7 50 394-446 4-55 (60)
227 1ssf_A Transformation related 47.4 35 0.0012 31.9 6.3 92 3-146 24-115 (156)
228 3kv5_D JMJC domain-containing 46.5 5.3 0.00018 45.2 0.9 27 510-538 38-67 (488)
229 2ct0_A Non-SMC element 1 homol 46.0 9.1 0.00031 31.5 2.0 31 395-429 14-44 (74)
230 1v5n_A PDI-like hypothetical p 46.0 8.5 0.00029 32.9 1.9 31 397-430 48-78 (89)
231 2ku7_A MLL1 PHD3-CYP33 RRM chi 45.5 3.4 0.00012 37.8 -0.8 34 413-446 2-43 (140)
232 2ysl_A Tripartite motif-contai 43.3 33 0.0011 27.2 5.1 49 394-447 18-66 (73)
233 3shb_A E3 ubiquitin-protein li 42.9 8.7 0.0003 31.9 1.4 28 510-539 28-57 (77)
234 2row_A RHO-associated protein 42.6 8.8 0.0003 32.4 1.4 34 396-429 35-70 (84)
235 3ask_A E3 ubiquitin-protein li 42.1 8.4 0.00029 38.8 1.4 28 510-539 176-205 (226)
236 2lbm_A Transcriptional regulat 41.6 9.1 0.00031 35.7 1.5 29 509-540 64-92 (142)
237 2ct0_A Non-SMC element 1 homol 41.3 11 0.00037 31.0 1.7 31 509-541 16-46 (74)
238 2ro1_A Transcription intermedi 41.2 6.8 0.00023 38.5 0.6 28 510-540 4-31 (189)
239 2lq6_A Bromodomain-containing 39.3 13 0.00045 31.5 2.0 31 452-482 17-51 (87)
240 1e4u_A Transcriptional repress 38.2 8.7 0.0003 31.8 0.7 51 394-447 9-59 (78)
241 2ect_A Ring finger protein 126 37.8 27 0.00091 28.3 3.7 49 394-447 13-61 (78)
242 2vrw_B P95VAV, VAV1, proto-onc 37.7 19 0.00065 39.5 3.6 35 395-429 356-390 (406)
243 3dpl_R Ring-box protein 1; ubi 37.1 12 0.0004 33.0 1.4 35 395-429 36-83 (106)
244 2csz_A Synaptotagmin-like prot 36.5 16 0.00055 30.1 2.0 50 395-447 24-73 (76)
245 2kiz_A E3 ubiquitin-protein li 36.5 14 0.00048 29.2 1.7 49 394-447 12-60 (69)
246 4a0k_B E3 ubiquitin-protein li 35.9 8.3 0.00028 34.7 0.2 34 396-429 48-94 (117)
247 1x4j_A Ring finger protein 38; 35.2 21 0.00072 28.7 2.6 49 394-447 21-69 (75)
248 1v87_A Deltex protein 2; ring- 34.9 11 0.00037 33.3 0.9 34 396-429 25-71 (114)
249 2ea6_A Ring finger protein 4; 34.2 17 0.00058 28.4 1.9 50 394-446 13-64 (69)
250 2ecm_A Ring finger and CHY zin 34.0 19 0.00065 26.8 2.0 48 395-446 4-51 (55)
251 1y71_A Kinase-associated prote 33.8 51 0.0017 29.8 4.9 52 121-178 55-112 (130)
252 3qxy_A N-lysine methyltransfer 33.3 21 0.00071 40.0 3.0 32 696-727 38-70 (449)
253 2qqr_A JMJC domain-containing 32.9 27 0.00093 31.3 3.1 54 80-146 4-58 (118)
254 2ct2_A Tripartite motif protei 32.5 16 0.00056 30.2 1.6 52 394-446 13-64 (88)
255 1nj3_A NPL4; NZF domain, rubre 32.4 19 0.00067 24.0 1.6 24 437-460 5-28 (31)
256 3ky9_A Proto-oncogene VAV; cal 32.3 26 0.0009 40.5 3.8 36 395-430 528-563 (587)
257 1wvo_A Sialic acid synthase; a 31.0 17 0.00059 30.2 1.4 17 796-812 8-24 (79)
258 4hcz_A PHD finger protein 1; p 30.1 44 0.0015 25.9 3.3 31 3-33 18-48 (58)
259 3dlm_A Histone-lysine N-methyl 30.0 1.1E+02 0.0038 30.2 7.1 100 2-146 22-126 (213)
260 2ku7_A MLL1 PHD3-CYP33 RRM chi 29.9 11 0.00037 34.3 -0.1 17 520-538 1-17 (140)
261 3nw0_A Non-structural maintena 29.3 30 0.001 35.2 3.1 46 396-446 180-225 (238)
262 3ql9_A Transcriptional regulat 28.9 20 0.00068 32.8 1.5 30 509-541 58-87 (129)
263 3gj3_B Nuclear pore complex pr 28.0 18 0.00062 24.8 0.8 24 436-459 5-28 (33)
264 2wac_A CG7008-PA; unknown func 27.5 57 0.0019 32.1 4.9 55 80-147 50-105 (218)
265 2ysj_A Tripartite motif-contai 26.0 19 0.00064 27.9 0.7 31 394-429 18-48 (63)
266 3a1b_A DNA (cytosine-5)-methyl 25.5 22 0.00074 33.7 1.1 46 396-446 79-133 (159)
267 2ep4_A Ring finger protein 24; 25.5 57 0.0019 25.9 3.6 49 394-447 13-61 (74)
268 2crc_A Ubiquitin conjugating e 25.4 38 0.0013 25.8 2.3 28 434-461 6-33 (52)
269 3pfq_A PKC-B, PKC-beta, protei 24.7 37 0.0013 40.0 3.2 36 394-429 111-146 (674)
270 1dvp_A HRS, hepatocyte growth 24.5 33 0.0011 34.3 2.4 55 390-445 155-214 (220)
271 3nw0_A Non-structural maintena 24.5 27 0.00091 35.5 1.7 32 508-541 180-211 (238)
272 4ap4_A E3 ubiquitin ligase RNF 24.4 19 0.00064 32.3 0.5 82 395-479 6-106 (133)
273 2l0b_A E3 ubiquitin-protein li 23.8 24 0.00082 29.8 1.0 47 395-446 39-85 (91)
274 2hqx_A P100 CO-activator tudor 23.7 54 0.0018 33.1 3.9 58 79-148 63-120 (246)
275 3db3_A E3 ubiquitin-protein li 23.5 69 0.0024 30.1 4.1 30 1-30 24-71 (161)
276 2h21_A Ribulose-1,5 bisphospha 23.3 43 0.0015 37.1 3.3 24 705-728 31-54 (440)
277 2lk0_A RNA-binding protein 5; 22.0 27 0.00093 23.6 0.8 24 437-460 4-27 (32)
278 3a9j_C Mitogen-activated prote 21.6 34 0.0011 23.3 1.2 25 436-460 6-30 (34)
279 3gj5_B Nuclear pore complex pr 21.4 28 0.00095 24.0 0.7 25 436-460 5-29 (34)
280 2d9g_A YY1-associated factor 2 21.2 57 0.0019 24.8 2.5 26 436-461 9-34 (53)
281 1ssf_A Transformation related 20.8 99 0.0034 28.9 4.5 47 83-142 10-57 (156)
282 2ebr_A Nuclear pore complex pr 20.8 73 0.0025 23.7 2.9 24 437-460 10-33 (47)
283 1igq_A Transcriptional repress 20.3 96 0.0033 24.3 3.6 28 15-42 32-60 (62)
No 1
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=100.00 E-value=3e-37 Score=310.88 Aligned_cols=156 Identities=51% Similarity=0.921 Sum_probs=141.0
Q ss_pred CcCChhhhhHHhhhccceeEEEEEecccCeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeecC
Q 002995 679 NFLSMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD 758 (860)
Q Consensus 679 ~~~~~~~~~~~l~~~~~~~l~v~~s~~~G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~~ 758 (860)
..+++.++++.||++.+.+|+|++|+++||||||+++|++|++|+||+|++|+..+++.|+.. |+. .+.+.|+|.+++
T Consensus 35 ~~~~~~~~~~~l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~-y~~-~~~~~Y~f~l~~ 112 (192)
T 2w5y_A 35 MDLPMPMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKY-YDS-KGIGCYMFRIDD 112 (192)
T ss_dssp SSCCHHHHHTTHHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHH-HHH-HTCCCCEEECSS
T ss_pred CCCCcchhHHHHhccCCCcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHH-Hhh-cCCceeeeeecC
Confidence 456889999999999999999999999999999999999999999999999999999988864 543 345689999999
Q ss_pred cceeeccccCCccccCCCCCCCCeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCC--CCeEEeeCCCCCccccC
Q 002995 759 ERVIDATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID--EQLACYCGFPRCRGVVN 836 (860)
Q Consensus 759 ~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~~~~~--~~~~C~Cg~~~Cr~~~~ 836 (860)
..+|||+..||++|||||||+|||.++.+.+++..+|+|+|+|||++||||||||++...+ ..+.|+||+++|||+||
T Consensus 113 ~~~IDa~~~Gn~arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~~~~~~~~~~C~Cgs~~Crg~ln 192 (192)
T 2w5y_A 113 SEVVDATMHGNAARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKCRKFLN 192 (192)
T ss_dssp SEEEECTTTCCGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC-------CCBCCCCCTTCCSBCC
T ss_pred ceEEECccccChhHhhccCCCCCEEEEEEEECCcEEEEEEECcccCCCCEEEEEcCCchhcCCCCceeECCCCCCcCcCC
Confidence 9999999999999999999999999998889999999999999999999999999987654 57999999999999997
No 2
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=100.00 E-value=1.2e-36 Score=323.56 Aligned_cols=158 Identities=26% Similarity=0.501 Sum_probs=144.5
Q ss_pred ChhhhhHHhhhccceeEEEEEecccCeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeecCcce
Q 002995 682 SMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDERV 761 (860)
Q Consensus 682 ~~~~~~~~l~~~~~~~l~v~~s~~~G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~~~~~ 761 (860)
...|.|+.+|++...+|+|++++++||||||+++|++|+||+||+|+||+..+++.|... |........|++.++.+.+
T Consensus 103 ~~~C~Nr~~q~g~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~-y~~~~~~~~y~~~l~~~~~ 181 (278)
T 3h6l_A 103 GDYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKE-YARNKNIHYYFMALKNDEI 181 (278)
T ss_dssp GGGCSSCTTTTTCCCCEEEEECSSSCEEEEESSCBCTTCEEEECCCEEECHHHHHHHHHH-HHHTTCCCCCEEEEETTEE
T ss_pred CCCCCCccccCCCccCEEEEEcCCCceEEEeCCccCCCCEeEEeeeeecCHHHHHHHHHH-HHhccCccceeecccCCeE
Confidence 467899999999999999999999999999999999999999999999999999998875 4444456678899999999
Q ss_pred eeccccCCccccCCCCCCCCeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCC-CCeEEeeCCCCCccccCCChH
Q 002995 762 IDATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID-EQLACYCGFPRCRGVVNDTEA 840 (860)
Q Consensus 762 iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~~~~~-~~~~C~Cg~~~Cr~~~~~~~~ 840 (860)
|||+..||++|||||||+|||.+..+.+++..+|+|||+|||++||||||||++...+ ..+.|+||+++|||+|.+...
T Consensus 182 IDa~~~GN~aRFiNHSC~PN~~~~~~~v~g~~ri~~fA~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~Crg~l~~~~~ 261 (278)
T 3h6l_A 182 IDATQKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANCRGYLGGENR 261 (278)
T ss_dssp EECSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTTEECSSCEECCCCCTTCCSEECCC--
T ss_pred EeCcccCChhhhcccCCCCCceeEEEEeCCceEEEEEECCccCCCCEEEEecCCCcCCCCCcEeECCCCCCeeecCCCCc
Confidence 9999999999999999999999999999999999999999999999999999987544 579999999999999998766
No 3
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=100.00 E-value=4.2e-36 Score=312.79 Aligned_cols=154 Identities=30% Similarity=0.551 Sum_probs=141.9
Q ss_pred ChhhhhHHhhhccceeEEEEEecccCeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeecCcce
Q 002995 682 SMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDERV 761 (860)
Q Consensus 682 ~~~~~~~~l~~~~~~~l~v~~s~~~G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~~~~~ 761 (860)
...|+|+.+|++...+|+|++++++||||||+++|++|++|+||+|++|+..+++.|... +........|+|.++.+++
T Consensus 78 ~~~C~Nr~~q~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~-~~~~~~~~~y~~~l~~~~~ 156 (232)
T 3ooi_A 78 GGRCQNQCFSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRY-AQEHDITNFYMLTLDKDRI 156 (232)
T ss_dssp GGGCCCCHHHHTCCCCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHH-HHHTTCCCCCEEEEETTEE
T ss_pred CCCcCCccccCCCCccEEEEEcCCceeEEEECceecCCceeeEeeeeccCHHHHHHHHHH-HhhcCCCceeeeecCcceE
Confidence 457899999999999999999999999999999999999999999999999999988764 4333445689999999999
Q ss_pred eeccccCCccccCCCCCCCCeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCC-CCeEEeeCCCCCccccC
Q 002995 762 IDATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID-EQLACYCGFPRCRGVVN 836 (860)
Q Consensus 762 iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~~~~~-~~~~C~Cg~~~Cr~~~~ 836 (860)
|||+..||+||||||||+|||.+..+.+++..+|+|||+|||++||||||||+++... .++.|+||+++|||+|+
T Consensus 157 IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~CrG~lG 232 (232)
T 3ooi_A 157 IDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGFLG 232 (232)
T ss_dssp EEEEEEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCSTTCTTCBCCCCCTTCCSBCC
T ss_pred EeccccccccccccccCCCCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCCcCCCCCcEeECCCCcCcCcCC
Confidence 9999999999999999999999999999999999999999999999999999987644 57999999999999985
No 4
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=308.28 Aligned_cols=158 Identities=35% Similarity=0.584 Sum_probs=138.5
Q ss_pred CChhhhhHHhhhccc-eeEEEEEecccCeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeecCc
Q 002995 681 LSMADKYKHMKETFR-KRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDE 759 (860)
Q Consensus 681 ~~~~~~~~~l~~~~~-~~l~v~~s~~~G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~~~ 759 (860)
+...|.|+.+|++.. .+|+|.+++++||||||+++|++|++|+||+|++|+..++..|....+. .....|+|.++..
T Consensus 58 C~~~C~Nr~~q~~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~--~~~~~y~~~l~~~ 135 (222)
T 3ope_A 58 CGEQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMIEQYH--NHSDHYCLNLDSG 135 (222)
T ss_dssp TTTSCSSCTTTTTCCCSCCEEEECTTSSEEEECSSCBCTTCEEEECCSEEECHHHHHHHHHHTST--TCCSCCEEEEETT
T ss_pred CCCCCCCceEeCCCccccEEEEEcCCCceEEEECceECCCCEEEEecceecCHHHHHHHHHHHhc--ccCCeEEEecCCC
Confidence 356789999998765 4699999999999999999999999999999999999998877654333 2346799999999
Q ss_pred ceeeccccCCccccCCCCCCCCeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCC--CCeEEeeCCCCCccccCC
Q 002995 760 RVIDATRAGSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID--EQLACYCGFPRCRGVVND 837 (860)
Q Consensus 760 ~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~~~~~--~~~~C~Cg~~~Cr~~~~~ 837 (860)
++|||+..||+||||||||+|||.+..+.+++..+|+|||+|||++||||||||++...+ ..++|+||+++|||+|++
T Consensus 136 ~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~~C~CGs~~Crg~i~~ 215 (222)
T 3ope_A 136 MVIDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRGIIGG 215 (222)
T ss_dssp EEEECSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECTTSSBCCCSCCCBCCCCCTTCCSBCC-
T ss_pred EEEeCccccccceeeccCCCCCeEeEEEEECCeEEEEEEECCccCCCCEEEEECCCcccCCcCCCEeeCCCcCCCCccCC
Confidence 999999999999999999999999999999999999999999999999999999987544 469999999999999998
Q ss_pred ChH
Q 002995 838 TEA 840 (860)
Q Consensus 838 ~~~ 840 (860)
...
T Consensus 216 ~~q 218 (222)
T 3ope_A 216 KSQ 218 (222)
T ss_dssp ---
T ss_pred CCc
Confidence 654
No 5
>2wzo_A Transforming growth factor beta regulator 1; nucleus, cell cycle, tumor suppressor; 1.60A {Homo sapiens}
Probab=100.00 E-value=7.8e-34 Score=273.64 Aligned_cols=142 Identities=25% Similarity=0.463 Sum_probs=128.6
Q ss_pred cccccceeeCCEEEEeeeeeeeCCCCCCCCCcccCCCeEEEEEeccCCCCCCcceEEEEEEecCCCCccceEEEEcCCCC
Q 002995 222 SIGISPYVFGDLQILSLGKIVKDSEYFQDDRFIWPEGYTAVRKFTSLADPRVCNSYKMEVLRDTESKIRPLFRVTLDNGE 301 (860)
Q Consensus 222 ~~~~~P~~~g~l~i~slG~iv~~~~~fh~~~~i~P~Gy~s~r~~~S~~dp~~~~~y~~~I~~~~~~~~~P~F~Vt~~~~~ 301 (860)
|...+|+++|+|+|+|||+|++++++||+++||||+||+++|.|+|+.||+++++|+|+|+++++. |+|+|+.++++
T Consensus 1 g~p~lP~~~g~l~v~slG~i~~~~~~fh~~~~IyPvGy~~~R~y~s~~dp~~~~~Y~c~I~d~~~~---P~F~V~~e~~~ 77 (146)
T 2wzo_A 1 GRPVFPIGLGGLTVYSLGEIITDRPGFHDESAIYPVGYCSTRIYASMKCPDQKCLYTCQIKDGGVQ---PQFEIVPEDDP 77 (146)
T ss_dssp CCCCCCEEETTEEEEEEEECCCSSGGGBCSSCBCCEEEEEEEEEECSSCTTSEEEEEEEEEECSSS---EEEEEEETTCG
T ss_pred CCceecEEECCEEEEEeeeEccCCCCccCCCceeCCCEEEEEEEecccCCCCeEEEEEEEEECCCc---ceeEEEecCCC
Confidence 346799999999999999999999999999999999999999999999999999999999998764 99999999987
Q ss_pred c--eecCCchHHHHHHHHHHHhhccCCCCCcccccccccccccCccccCCCcHHHHHHHhhcCCCCCCCchhhhhh
Q 002995 302 Q--FTGSTPSTCWSKICMKIREGQNNTSDDFSAEGAAEKISESGSDMFGFSNPEVMKLILGLTKSRPTSKSSLCKL 375 (860)
Q Consensus 302 ~--~~~~s~~~~W~~i~~~i~~~~~~~~~~~~~~~~~~~~~~sG~~~FGls~p~v~~li~~Lp~a~~c~k~~~~k~ 375 (860)
. |.|+||++||.+++++|++.+... .....++|++||||++|.|++|||+||++++|.+|.+++.
T Consensus 78 ~~~~~g~Sp~~~W~~il~~i~~~~~~~---------~~~~~~sG~~~FGl~~p~V~~lie~Lpg~~~C~~Y~~~~f 144 (146)
T 2wzo_A 78 QNAIVSSSADACHAELLRTISTTMGKL---------MPNLLPAGADFFGFSHPAIHNLIQSCPGARKCINYQWVKF 144 (146)
T ss_dssp GGCEEESSHHHHHHHHHHHHHHHHTCC---------CTTCCCCHHHHHTTTSHHHHHHHTTSTTGGGCTTCCCCCC
T ss_pred CceEEeCChHHHHHHHHHHHHHHhcCc---------CCCCCCChhheecCCCHHHHHHHHhCCCchhcccCCcEEe
Confidence 4 999999999999999998866432 1123579999999999999999999999999999987764
No 6
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=303.51 Aligned_cols=155 Identities=28% Similarity=0.478 Sum_probs=135.5
Q ss_pred CChhhhhHHhhhccceeEEEEEecccCeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeecC--
Q 002995 681 LSMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD-- 758 (860)
Q Consensus 681 ~~~~~~~~~l~~~~~~~l~v~~s~~~G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~~-- 758 (860)
+...|+|+.+|++.+.+|+|++++++||||||+++|++|+||+||+||||+..+++.|... +.. ....|+|.++.
T Consensus 111 C~~~C~Nr~~q~g~~~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~-~~~--~~~~Y~~~l~~~~ 187 (290)
T 3bo5_A 111 CSDHCRNRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHL-QTK--SDSNYIIAIREHV 187 (290)
T ss_dssp SCTTCTTCCGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHTT-CCS--SCCCCCEEEEECC
T ss_pred CCCCCCCeEcccCCcccEEEEEcCCCcceEeECCccCCCCEEEEEeeEEeCHHHHHHHHHh-hcc--cCCcceeeecccc
Confidence 3568999999999999999999999999999999999999999999999999999888753 322 23579888753
Q ss_pred ------cceeeccccCCccccCCCCCCCCeeEEEEEECC-eeEEEEEEccCCCCCCeEEEecCCCCCC------------
Q 002995 759 ------ERVIDATRAGSIAHLINHSCEPNCYSRVISVNG-DEHIIIFAKRDIKQWEELTYDYRFFSID------------ 819 (860)
Q Consensus 759 ------~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~-~~~i~i~A~RdI~~GEELt~dY~~~~~~------------ 819 (860)
+++|||+..||++|||||||+|||.+..+.+++ ..+|+|||+|||++||||||||+..+.+
T Consensus 188 ~~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~ 267 (290)
T 3bo5_A 188 YNGQVMETFVDPTYIGNIGRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLNLTVSASKERLDH 267 (290)
T ss_dssp -----EEEEEEEEEEECGGGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTTCCSSSEEEEEEEC
T ss_pred cCCccceeEEeeeecCCchheeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCCcccccccccccccccc
Confidence 368999999999999999999999998888776 4799999999999999999999865421
Q ss_pred --CCeEEeeCCCCCccccCCC
Q 002995 820 --EQLACYCGFPRCRGVVNDT 838 (860)
Q Consensus 820 --~~~~C~Cg~~~Cr~~~~~~ 838 (860)
..++|+||+++|||+|+..
T Consensus 268 ~~~~~~C~CGs~~CrG~l~~~ 288 (290)
T 3bo5_A 268 GKLRKPCYCGAKSCTAFLPFD 288 (290)
T ss_dssp SSCCCBCCCCCTTCCSBCCCE
T ss_pred CCCCccccCCCcCCCccCCCC
Confidence 3579999999999999764
No 7
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=100.00 E-value=2.6e-33 Score=301.83 Aligned_cols=153 Identities=29% Similarity=0.457 Sum_probs=119.3
Q ss_pred ChhhhhHHhhhccceeEEEEEecccCeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeecC---
Q 002995 682 SMADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD--- 758 (860)
Q Consensus 682 ~~~~~~~~l~~~~~~~l~v~~s~~~G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~~--- 758 (860)
...|+|+.+|++...+|+|++++++||||||+++|++|+||+||+|+||+..+++.|... |+. ....|+|.++.
T Consensus 123 ~~~C~Nr~~q~g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~Gevi~~~ea~~R~~~-y~~--~~~~Y~f~l~~~~~ 199 (299)
T 1mvh_A 123 SMECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKN-YDD--DGITYLFDLDMFDD 199 (299)
T ss_dssp CTTCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTT-CCS--CSCCCEEEECSSCS
T ss_pred CCCcCCccccccccccEEEEEcCCCcceEeeCceeCCCCEEEEeeeEECcHHHHHHHHHh-hhc--cCceEEEEecCCCC
Confidence 457899999999999999999999999999999999999999999999999999988864 432 23689999984
Q ss_pred --cceeeccccCCccccCCCCCCCCeeEEEEEEC----CeeEEEEEEccCCCCCCeEEEecCCCCC----C---------
Q 002995 759 --ERVIDATRAGSIAHLINHSCEPNCYSRVISVN----GDEHIIIFAKRDIKQWEELTYDYRFFSI----D--------- 819 (860)
Q Consensus 759 --~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~----~~~~i~i~A~RdI~~GEELt~dY~~~~~----~--------- 819 (860)
.++|||+..||+||||||||+|||.+..++++ +..+|+|||+|||++||||||||++... +
T Consensus 200 ~~~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~ 279 (299)
T 1mvh_A 200 ASEYTVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSPVQSQKSQQNRI 279 (299)
T ss_dssp SSCEEEECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSSSSCCC---------
T ss_pred CccEEEeCcccCChhheEeecCCCCeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEcCCccccccccccccccccc
Confidence 68999999999999999999999998766664 3479999999999999999999987654 1
Q ss_pred --CCeEEeeCCCCCccccCC
Q 002995 820 --EQLACYCGFPRCRGVVND 837 (860)
Q Consensus 820 --~~~~C~Cg~~~Cr~~~~~ 837 (860)
..++|+||+++|||+|.+
T Consensus 280 ~k~~~~C~CGs~~Crg~l~g 299 (299)
T 1mvh_A 280 SKLRRQCKCGSANCRGWLFG 299 (299)
T ss_dssp --------------------
T ss_pred ccCCcCcCCCCCCCccccCC
Confidence 126999999999999864
No 8
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=99.98 E-value=2.9e-33 Score=302.98 Aligned_cols=152 Identities=26% Similarity=0.393 Sum_probs=115.1
Q ss_pred hhhhhHHhhhccceeEEEEEecccCeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeecC----
Q 002995 683 MADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD---- 758 (860)
Q Consensus 683 ~~~~~~~l~~~~~~~l~v~~s~~~G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~~---- 758 (860)
..|.|+.+|++.+.+|+|++++++||||||+++|++|+||+||+||||+..+++.|... |......+.|+|.++.
T Consensus 120 ~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~-~~~~~~~~~Y~f~l~~~~~~ 198 (302)
T 1ml9_A 120 KDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAE-STIARRKDVYLFALDKFSDP 198 (302)
T ss_dssp TTCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEEECHHHHHHHHHH-SCGGGCHHHHEEECCSSCCS
T ss_pred CCCCCcccccCCccceEEEEcCCCceEEEECCeeCCCCEEEEEeeEEeCHHHHHHHHHH-HhhhcCCceEEEEeccccCc
Confidence 45789999999999999999999999999999999999999999999999999998764 3222334679999874
Q ss_pred ----------cceeeccccCCccccCCCCCCCCeeEEEEEEC----CeeEEEEEEccCCCCCCeEEEecCCCCCC-----
Q 002995 759 ----------ERVIDATRAGSIAHLINHSCEPNCYSRVISVN----GDEHIIIFAKRDIKQWEELTYDYRFFSID----- 819 (860)
Q Consensus 759 ----------~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~----~~~~i~i~A~RdI~~GEELt~dY~~~~~~----- 819 (860)
.++|||+.+||++|||||||+|||.+..+..+ +..+|+|||+|||++||||||||++....
T Consensus 199 ~~~d~~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~~~~~~~ 278 (302)
T 1ml9_A 199 DSLDPLLAGQPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDA 278 (302)
T ss_dssp SSSCHHHHSCCCEEECSSEECGGGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC---------
T ss_pred ccccccccCCcEEEeCcccCCHHHhcccCCCCCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECCCcccccccc
Confidence 68999999999999999999999987654332 23699999999999999999999875432
Q ss_pred -------CCeEEeeCCCCCcccc
Q 002995 820 -------EQLACYCGFPRCRGVV 835 (860)
Q Consensus 820 -------~~~~C~Cg~~~Cr~~~ 835 (860)
..++|+||+++|||+|
T Consensus 279 ~~~~k~~~~~~C~CGs~~Crg~l 301 (302)
T 1ml9_A 279 HDPSKISEMTKCLCGTAKCRGYL 301 (302)
T ss_dssp -----------------------
T ss_pred ccccccCCCcEeeCCCCcCcccc
Confidence 2479999999999997
No 9
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=99.98 E-value=3.6e-33 Score=300.23 Aligned_cols=152 Identities=31% Similarity=0.568 Sum_probs=132.4
Q ss_pred ChhhhhHHhhhccceeEEEEEec-ccCeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeec---
Q 002995 682 SMADKYKHMKETFRKRLAFGKSG-IHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRID--- 757 (860)
Q Consensus 682 ~~~~~~~~l~~~~~~~l~v~~s~-~~G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~--- 757 (860)
...|.|+.+|++.+.+|.|.++. ++||||||+++|++|+||+||+||||+..+++.|... |+.. ...|+|.++
T Consensus 126 ~~~C~Nr~~q~g~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ea~~R~~~-y~~~--~~~Y~f~l~~~~ 202 (300)
T 2r3a_A 126 GPDCPNRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQF-YDNK--GITYLFDLDYES 202 (300)
T ss_dssp CTTCTTCSGGGCCCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECCEEEEHHHHHHHHHT-CCHH--HHHTEEECCSSC
T ss_pred CCcCCCccccccccccEEEEEeCCCceEEEEeCccccCCCEeEEEeeEEecHHHHHHHHHH-hhhc--cccEEEEeecCC
Confidence 34789999999999999998875 7999999999999999999999999999999988753 4321 247999887
Q ss_pred CcceeeccccCCccccCCCCCCCCeeEEEEEECC----eeEEEEEEccCCCCCCeEEEecCCCCCC--------------
Q 002995 758 DERVIDATRAGSIAHLINHSCEPNCYSRVISVNG----DEHIIIFAKRDIKQWEELTYDYRFFSID-------------- 819 (860)
Q Consensus 758 ~~~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~----~~~i~i~A~RdI~~GEELt~dY~~~~~~-------------- 819 (860)
..++|||+..||++|||||||+|||.+..+.+++ ..+|+|||+|||++||||||||++....
T Consensus 203 ~~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~d~~~~~~ 282 (300)
T 2r3a_A 203 DEFTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKGSGDISSDSIDHSPAKK 282 (300)
T ss_dssp SSEEEECSSEECGGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGGGSSCC--------------
T ss_pred ceEEEecccccChHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEECCCCccccccccccccccccc
Confidence 5789999999999999999999999998877753 5799999999999999999999876321
Q ss_pred -CCeEEeeCCCCCccccC
Q 002995 820 -EQLACYCGFPRCRGVVN 836 (860)
Q Consensus 820 -~~~~C~Cg~~~Cr~~~~ 836 (860)
..++|+||+++|||+||
T Consensus 283 ~~~~~C~CGs~~Crg~ln 300 (300)
T 2r3a_A 283 RVRTVCKCGAVTCRGYLN 300 (300)
T ss_dssp CCCCBCCCCCTTCCSBCC
T ss_pred cCCCEeeCCCccccccCc
Confidence 25899999999999997
No 10
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=99.97 E-value=7.2e-33 Score=296.40 Aligned_cols=143 Identities=31% Similarity=0.554 Sum_probs=126.7
Q ss_pred hhhhhHHhhhccceeEEEEEecccCeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeecCc---
Q 002995 683 MADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDE--- 759 (860)
Q Consensus 683 ~~~~~~~l~~~~~~~l~v~~s~~~G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~~~--- 759 (860)
..|.|+.+|++.+.+|+|++++++||||||+++|++|++|+||+|++|+..+++.|+. ..|+|.++..
T Consensus 134 ~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e~~~r~~---------~~Y~f~l~~~~~~ 204 (287)
T 3hna_A 134 RNCRNRVVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEADVREE---------DSYLFDLDNKDGE 204 (287)
T ss_dssp TTCSSCSGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEEHHHHHTCSC---------CTTEEESCCSSSS
T ss_pred CCCCCcccCcCCcccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEccHHHHhhhcc---------cceEEEeccCCCc
Confidence 4678899999999999999999999999999999999999999999999988876642 5789988754
Q ss_pred -ceeeccccCCccccCCCCCCCCeeEEEEEECCe----eEEEEEEccCCCCCCeEEEecCCCCC---CCCeEEeeCCCCC
Q 002995 760 -RVIDATRAGSIAHLINHSCEPNCYSRVISVNGD----EHIIIFAKRDIKQWEELTYDYRFFSI---DEQLACYCGFPRC 831 (860)
Q Consensus 760 -~~iDa~~~gn~aRfiNHSC~PN~~~~~~~~~~~----~~i~i~A~RdI~~GEELt~dY~~~~~---~~~~~C~Cg~~~C 831 (860)
++|||+..||++|||||||+||+.+..+++.+. .+|+|||+|||++||||||||+..+. ...+.|+||+++|
T Consensus 205 ~~~IDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~~~~~~~C~CGs~~C 284 (287)
T 3hna_A 205 VYCIDARFYGNVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIKGKLFSCRCGSPKC 284 (287)
T ss_dssp CEEEEEEEEECGGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHHHHTTTCCCCCCCTTC
T ss_pred eEEEeccccCCchheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCCCcccccCCCcCEeeCCCCCC
Confidence 599999999999999999999999877666543 59999999999999999999986432 3579999999999
Q ss_pred ccc
Q 002995 832 RGV 834 (860)
Q Consensus 832 r~~ 834 (860)
||+
T Consensus 285 Rgs 287 (287)
T 3hna_A 285 RHS 287 (287)
T ss_dssp SCC
T ss_pred CCC
Confidence 985
No 11
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=99.96 E-value=5.7e-30 Score=254.14 Aligned_cols=135 Identities=30% Similarity=0.483 Sum_probs=119.8
Q ss_pred hhhhhHHhhhccceeEEEEEecccCeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeee---ecCc
Q 002995 683 MADKYKHMKETFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFR---IDDE 759 (860)
Q Consensus 683 ~~~~~~~l~~~~~~~l~v~~s~~~G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~---~~~~ 759 (860)
+...++.++++...+|+|.+++++||||||+++|++|++|+||+|++|+..+++.|... |........|+|. ++..
T Consensus 17 ~~~~~~~~q~g~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~~~~~r~~~-~~~~~~~~~y~~~~~~~~~~ 95 (166)
T 3f9x_A 17 RKRIDELIESGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKREAL-YAQDPSTGCYMYYFQYLSKT 95 (166)
T ss_dssp HHHHHHHHHHTCCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEEEHHHHHHHHHH-HTTCTTSCCCEEEEEETTEE
T ss_pred HHHHHHHHHcCCccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEcCHHHHHHHHHH-HhhccCCCceEEEEecCCCC
Confidence 34456778899999999999999999999999999999999999999999999999874 5544444556654 6788
Q ss_pred ceeecccc-CCccccCCCCCCCCeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCC
Q 002995 760 RVIDATRA-GSIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSI 818 (860)
Q Consensus 760 ~~iDa~~~-gn~aRfiNHSC~PN~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~~~~ 818 (860)
++|||+.. ||++|||||||+|||.+..+.+++..+|.|+|+|||++||||||||++.+.
T Consensus 96 ~~iDa~~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~ 155 (166)
T 3f9x_A 96 YCVDATRETNRLGRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLFDYGDRSK 155 (166)
T ss_dssp EEEECCSCCSCSGGGCEECTTCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCCCCCH
T ss_pred eEEechhcCCChhheeecCCCCCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEcCCChh
Confidence 99999996 999999999999999999999999999999999999999999999998653
No 12
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=99.92 E-value=1.7e-25 Score=236.00 Aligned_cols=118 Identities=26% Similarity=0.340 Sum_probs=102.8
Q ss_pred ceeEEEEEeccc--CeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeecCcceeecc-------
Q 002995 695 RKRLAFGKSGIH--GFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDERVIDAT------- 765 (860)
Q Consensus 695 ~~~l~v~~s~~~--G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~~~~~iDa~------- 765 (860)
.+.+.|++|+++ ||||||+++|++|++|+||+|++|+..+++.|... + ..|+|.+++..+|||+
T Consensus 108 ~~~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R~~~-~------~~~~f~l~~~~~IDa~~~~~~~~ 180 (261)
T 2f69_A 108 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWA-L------NGNTLSLDEETVIDVPEPYNHVS 180 (261)
T ss_dssp HTTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSCGG-G------CSSCEECSSSCEEECCTTTTSTT
T ss_pred CceEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEeCHHHHHHHhhh-h------ccceeeecCCeEEEccccccccc
Confidence 457999999988 99999999999999999999999999999988753 3 2577999999999995
Q ss_pred -ccCCccccCCCCCCCCeeEEEEEECC-eeEEEEEEccCCCCCCeEEEecCCCCCC
Q 002995 766 -RAGSIAHLINHSCEPNCYSRVISVNG-DEHIIIFAKRDIKQWEELTYDYRFFSID 819 (860)
Q Consensus 766 -~~gn~aRfiNHSC~PN~~~~~~~~~~-~~~i~i~A~RdI~~GEELt~dY~~~~~~ 819 (860)
..||++|||||||+|||.+..+...+ ...|.|+|+|||++||||||||++..+.
T Consensus 181 ~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dYg~~~~~ 236 (261)
T 2f69_A 181 KYCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSP 236 (261)
T ss_dssp TCCSCCGGGCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCCCCSCC
T ss_pred cccccceeeEeeCCCCCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEcCCcccc
Confidence 59999999999999999998764333 2345999999999999999999987653
No 13
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=99.92 E-value=2e-25 Score=215.37 Aligned_cols=124 Identities=20% Similarity=0.236 Sum_probs=104.6
Q ss_pred CcCChhhhhHHhhhccceeEEEEEeccc--CeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeee
Q 002995 679 NFLSMADKYKHMKETFRKRLAFGKSGIH--GFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRI 756 (860)
Q Consensus 679 ~~~~~~~~~~~l~~~~~~~l~v~~s~~~--G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~ 756 (860)
...++......+.++..+.|.|++|.++ ||||||+++|++|++|++|.|++++..++. ...|+|.+
T Consensus 12 ~~~~~~~~~~~~~~~lp~~l~l~~S~i~~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~~------------~~~Y~f~i 79 (149)
T 2qpw_A 12 ATETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVK------------NNVYMWEV 79 (149)
T ss_dssp CCCCGGGSCHHHHHTCCTTEEEEECSSCTTSEEEEESSCBCTTCEECCCCCEEECGGGCC------------CSSSEEEE
T ss_pred cccccchhhHHHHhCCCCCeEEEEcCCCCCceEEEECCccCCCCEEEEEeCEEcCHHHhc------------cCceEEEE
Confidence 4456666677788889999999999865 999999999999999999999999876431 24799998
Q ss_pred c---C-cceeeccc--cCCccccCCCCCCC---CeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCC
Q 002995 757 D---D-ERVIDATR--AGSIAHLINHSCEP---NCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSI 818 (860)
Q Consensus 757 ~---~-~~~iDa~~--~gn~aRfiNHSC~P---N~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~~~~ 818 (860)
. . .++|||+. .||++|||||||+| ||.+.. ...+|.|+|+|||++||||||||+..+.
T Consensus 80 ~~~~~~~~~IDa~~~~~gn~~RfINhSc~p~eqNl~~~~----~~~~I~~~A~RdI~~GEEL~~dY~~~~~ 146 (149)
T 2qpw_A 80 YYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLE----INRAIYYKTLKPIAPGEELLVWYNGEDN 146 (149)
T ss_dssp EETTTEEEEEECSSGGGSCGGGGCEECBTTBTCCEEEEE----ETTEEEEEESSCBCTTCBCEECCCCCCC
T ss_pred ecCCCeeEEEeCCCCCCCcceeeeeccCChhhcCEEEEE----ECCEEEEEEccCCCCCCEEEEccCCccC
Confidence 4 2 35799998 99999999999999 988743 2469999999999999999999987643
No 14
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.92 E-value=7.7e-26 Score=211.41 Aligned_cols=109 Identities=24% Similarity=0.318 Sum_probs=96.9
Q ss_pred ceeEEEEEecccCeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeecCcceeeccccCCccccC
Q 002995 695 RKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDERVIDATRAGSIAHLI 774 (860)
Q Consensus 695 ~~~l~v~~s~~~G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~~~~~iDa~~~gn~aRfi 774 (860)
.++++|++|+++||||||+++|++|++|+||.|++++..+++. ....|+|.++. |++..+|.+|||
T Consensus 3 ~~~~~v~~s~~~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~----------~~~~y~f~~~~----d~~~~~~~~~~~ 68 (119)
T 1n3j_A 3 NDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGT----------ALEDYLFSRKN----MSAMALGFGAIF 68 (119)
T ss_dssp CSSEEEECSCSSCCEEEECCCBCSCEEECCCCCEEECSHHHHH----------HSCSEEEEETT----EEEEESSSHHHH
T ss_pred CCCEEEEECCCceeEEEECCcCCCCCEEEEeeEEEECHHHHhh----------ccCCeEEEeCC----ccccccCceeee
Confidence 5689999999999999999999999999999999999876654 12479999887 899999999999
Q ss_pred CCCCCCCeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCC
Q 002995 775 NHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID 819 (860)
Q Consensus 775 NHSC~PN~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~~~~~ 819 (860)
||||+|||.+.. ..+..++.|+|+|||++|||||+||+..+..
T Consensus 69 NHsc~pN~~~~~--~~~~~~~~~~A~rdI~~GeElt~~Y~~~~~~ 111 (119)
T 1n3j_A 69 NHSKDPNARHEL--TAGLKRMRIFTIKPIAIGEEITISYGDDYWL 111 (119)
T ss_dssp HSCSSCCCEEEE--CSSSSCEEEEECSCBCSSEEECCCCCCCCCC
T ss_pred ccCCCCCeeEEE--ECCCeEEEEEEccccCCCCEEEEecCchhhc
Confidence 999999998875 4567899999999999999999999986544
No 15
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.91 E-value=2.2e-24 Score=233.45 Aligned_cols=118 Identities=25% Similarity=0.312 Sum_probs=104.2
Q ss_pred ceeEEEEEecccC--eeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeecCcceeec--------
Q 002995 695 RKRLAFGKSGIHG--FGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDERVIDA-------- 764 (860)
Q Consensus 695 ~~~l~v~~s~~~G--~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~~~~~iDa-------- 764 (860)
.+++.|++|+++| |||||+++|++|++|+||+|++|+..+++.|... + ..|+|.+++..+|||
T Consensus 162 ~~~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~~~-~------~~~~~~l~~~~~iDa~~~~~~~~ 234 (293)
T 1h3i_A 162 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWA-L------NGNTLSLDEETVIDVPEPYNHVS 234 (293)
T ss_dssp HTTEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSCGG-G------CTTEEECSSSCEEECCTTTTSTT
T ss_pred ceeEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHhhh-c------ccCEEecCCCEEEeCcccccccc
Confidence 4679999999987 9999999999999999999999999999988753 2 257799999999999
Q ss_pred cccCCccccCCCCCCCCeeEEEEEECCeeE-EEEEEccCCCCCCeEEEecCCCCCC
Q 002995 765 TRAGSIAHLINHSCEPNCYSRVISVNGDEH-IIIFAKRDIKQWEELTYDYRFFSID 819 (860)
Q Consensus 765 ~~~gn~aRfiNHSC~PN~~~~~~~~~~~~~-i~i~A~RdI~~GEELt~dY~~~~~~ 819 (860)
+..||+||||||||+|||.+..+...+..+ |.|+|+|||++||||||||+++.++
T Consensus 235 ~~~gn~ar~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Yg~~~~~ 290 (293)
T 1h3i_A 235 KYCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSP 290 (293)
T ss_dssp TCCSCCGGGSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEEETTBCC
T ss_pred eeeccceeeeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEecCCCCCC
Confidence 779999999999999999998864444345 4899999999999999999997654
No 16
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.90 E-value=4.9e-25 Score=230.72 Aligned_cols=133 Identities=22% Similarity=0.212 Sum_probs=102.8
Q ss_pred eeEEEEEecc-----cCeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeecCcceeeccccCCc
Q 002995 696 KRLAFGKSGI-----HGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDERVIDATRAGSI 770 (860)
Q Consensus 696 ~~l~v~~s~~-----~G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~~~~~iDa~~~gn~ 770 (860)
..++|..+.. +||||||+++|++|++|+||+|+++...+++.+. +.. .+...|.+..+ ....+++..||.
T Consensus 131 ~gfeV~~~~ry~~e~~G~GlfA~~~I~kGe~I~EY~Geii~~~e~ee~~---~~~-~~~~dF~i~~s-~~~~~a~~~g~~ 205 (273)
T 3s8p_A 131 SGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENM---LLR-HGENDFSVMYS-TRKNCAQLWLGP 205 (273)
T ss_dssp GCEEEEEECCCTTCSSEEEEEESSCBCTTCEEEEEEEEEEEECHHHHHH---HCC-TTTSCTTEEEE-TTTTEEEEEESG
T ss_pred CCceEEeccceeecCCCceEEECCccCCCCEEEEEEEEEccccHHHHHH---Hhh-hcccccceecc-ccccccceecch
Confidence 4577777664 8999999999999999999999998877665432 211 11222332222 223468889999
Q ss_pred cccCCCCCCCCeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCC-CCeEEeeCCCCCccccC
Q 002995 771 AHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID-EQLACYCGFPRCRGVVN 836 (860)
Q Consensus 771 aRfiNHSC~PN~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~~~~~-~~~~C~Cg~~~Cr~~~~ 836 (860)
||||||||+|||.+. ..+..+|.|+|+|||++|||||+||+..... .++.|.||+.+|+|...
T Consensus 206 arfiNHSC~PN~~~~---~~~~~~i~i~A~RdI~~GEELt~~Y~~~~~~~~~f~C~C~~c~crG~g~ 269 (273)
T 3s8p_A 206 AAFINHDCRPNCKFV---STGRDTACVKALRDIEPGEEISCYYGDGFFGENNEFCECYTCERRGTGA 269 (273)
T ss_dssp GGGCEECSSCSEEEE---EEETTEEEEEESSCBCTTCBCEECCCTTTTSGGGTTCCCHHHHHHTCGG
T ss_pred HHhhCCCCCCCeEEE---EcCCCEEEEEECceeCCCCEEEEecCchhcCCCCeEEECCCCcCCCCCC
Confidence 999999999999763 2345689999999999999999999987654 47899999999999754
No 17
>2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2
Probab=99.88 E-value=2.5e-23 Score=191.01 Aligned_cols=102 Identities=25% Similarity=0.355 Sum_probs=83.8
Q ss_pred ccCCCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCccccccccccc-ccc
Q 002995 76 LDDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSS-FHL 154 (860)
Q Consensus 76 ~~~~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~~~~~-~~~ 154 (860)
..++..|.+||||||||+|||||||+|+++..++. ..++.++..+.|+|+|||+++|+||++++|+||.++.... ...
T Consensus 3 ~~~g~~~~~GdlVwaK~~g~p~WPa~V~~~~~~p~-~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~p~~~~~~~~~~~~ 81 (110)
T 2daq_A 3 SGSSGKLHYKQIVWVKLGNYRWWPAEICNPRSVPL-NIQGLKHDLGDFPVFFFGSHDYYWVHQGRVFPYVEGDKSFAEGQ 81 (110)
T ss_dssp SSCCCSCCSSEEEEEECSSSCEEEEEECCTTTSCH-HHHTSCCCSSCEEEEETTTTEEEEECSSSSEECCSSCCSSSCSS
T ss_pred CCCCCCCCCCCEEEEEeCCCCCCceeeCChhhCCH-HHhhccCCCCcEEEEEecCCCEEEEcHHHCcCcchhhHHHhhhc
Confidence 35678999999999999999999999999987776 4344445567899999999999999999999999874321 345
Q ss_pred cCChHHHHHHHHHHHHHHHhCCCc
Q 002995 155 KCKKPRFTQSLEEAKVYLSEQKLP 178 (860)
Q Consensus 155 k~k~~~~~~A~~ea~~~~~~~~~~ 178 (860)
+++++.|++||+||++++++.+..
T Consensus 82 ~~~~k~f~~Al~eA~~~~~~~~~~ 105 (110)
T 2daq_A 82 TSINKTFKKALEEAAKRFQELKAS 105 (110)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHSS
T ss_pred ccchHHHHHHHHHHHHHHHHHHhh
Confidence 667799999999999988765443
No 18
>3qby_A Hepatoma-derived growth factor-related protein 2; HDGF2, structural genomics consortium, SGC, protein binding; HET: M3L; 1.95A {Homo sapiens} SCOP: b.34.9.2 PDB: 3qj6_A* 3eae_A 1n27_A
Probab=99.87 E-value=6.3e-23 Score=181.71 Aligned_cols=84 Identities=27% Similarity=0.462 Sum_probs=73.8
Q ss_pred CCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCcccccccccccccccCChH
Q 002995 80 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFHLKCKKP 159 (860)
Q Consensus 80 ~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~~~~~~~~k~k~~ 159 (860)
.+|++||||||||+|||||||+|++.... . .++..+.|+|+|||+++||||++++|+||.++ ...+.+++|++
T Consensus 4 ~~f~~GdlVwaK~~g~p~WPa~V~~~~~~----~--~k~~~~~~~V~FFGt~~~awv~~~~l~pf~~~-~~~~~k~~k~k 76 (94)
T 3qby_A 4 HAFKPGDLVFAKMKGYPHWPARIDDIADG----A--VKPPPNKYPIFFFGTHETAFLGPKDLFPYDKC-KDKYGKPNKRK 76 (94)
T ss_dssp CCCCTTCEEEECCTTSCCEEEEECCCCTT----S--BCCCTTCEEEEETTTCCEEEECGGGEEEHHHH-HHHHCSCCSST
T ss_pred CcCccCCEEEEecCCCCCCCEEEeecccc----c--ccCCCCEEEEEEEcCCCcceEchhHeeEHHHH-HHHHccCccHH
Confidence 57999999999999999999999986421 1 23456889999999999999999999999986 77788889999
Q ss_pred HHHHHHHHHHH
Q 002995 160 RFTQSLEEAKV 170 (860)
Q Consensus 160 ~~~~A~~ea~~ 170 (860)
.|++||+||+.
T Consensus 77 ~F~~Al~Eien 87 (94)
T 3qby_A 77 GFNEGLWEIQN 87 (94)
T ss_dssp THHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999999985
No 19
>4fu6_A PC4 and SFRS1-interacting protein; structural genomics consortium, SGC, transcription; 2.10A {Homo sapiens} PDB: 2b8a_A 2nlu_A
Probab=99.87 E-value=4.6e-23 Score=200.33 Aligned_cols=86 Identities=27% Similarity=0.466 Sum_probs=73.7
Q ss_pred CCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCcccccccccccccccCChH
Q 002995 80 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFHLKCKKP 159 (860)
Q Consensus 80 ~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~~~~~~~~k~k~~ 159 (860)
.+|++||||||||+|||||||+|+++..... +...+.|+|+|||+++||||++++|+||.++ ..++.+++|++
T Consensus 21 ~~f~~GdlVwaK~~g~p~WPa~V~~~~~~~~------~~~~~~~~V~FfG~~~~awv~~~~l~~f~e~-~~~~~k~~k~k 93 (153)
T 4fu6_A 21 RDFKPGDLIFAKMKGYPHWPARVDEVPDGAV------KPPTNKLPIFFFGTHETAFLGPKDIFPYSEN-KEKYGKPNKRK 93 (153)
T ss_dssp GGCCTTCEEEECCTTSCCEEEEECCCC---C------CCCTTCEEEEETTTCCEEEECGGGEEEHHHH-HHHHCSCCSST
T ss_pred cCCCCCCEEEEeCCCCCCCCEEEeEchhhcc------CCCCCEEEEEecCCCCeEEeCHHHccChHhH-HHHHhcccchH
Confidence 5799999999999999999999998654322 2445679999999999999999999999987 77888888999
Q ss_pred HHHHHHHHHHHHH
Q 002995 160 RFTQSLEEAKVYL 172 (860)
Q Consensus 160 ~~~~A~~ea~~~~ 172 (860)
.|++||+||+...
T Consensus 94 ~f~~Av~Eie~~~ 106 (153)
T 4fu6_A 94 GFNEGLWEIDNNP 106 (153)
T ss_dssp THHHHHHHHHHCT
T ss_pred HHHHHHHHHHHCh
Confidence 9999999997653
No 20
>1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A
Probab=99.86 E-value=4.6e-22 Score=181.29 Aligned_cols=89 Identities=26% Similarity=0.420 Sum_probs=75.8
Q ss_pred CccCCCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCcccccccccccccc
Q 002995 75 SLDDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFHL 154 (860)
Q Consensus 75 ~~~~~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~~~~~~~~ 154 (860)
...+...|++||||||||+|||||||+|++.+.. .+ ++..+.|+|+|||+++||||++++|+||.++ ..++.+
T Consensus 13 ~~~~~~~~~~GdlVwaK~kGyP~WPa~V~~~p~~----~~--k~~~~~~~V~FFGt~~~awv~~~~l~pf~~~-~~k~~~ 85 (110)
T 1ri0_A 13 RSNRQKEYKCGDLVFAKMKGYPHWPARIDEMPEA----AV--KSTANKYQVFFFGTHETAFLGPKDLFPYEES-KEKFGK 85 (110)
T ss_dssp CCCCSSSCCTTCEEEEEETTEEEEEEEEECCCSS----SS--CCCSSCEEEEETTTTEEEEECSTTEECHHHH-HHHCCC
T ss_pred cccccCCCCCCCEEEEEeCCCCCCCEEEecccHh----hc--CCCCCEEEEEEecCCCEEEECHHHccchhhh-HHHHcc
Confidence 3455678999999999999999999999975432 22 2456889999999999999999999999986 677888
Q ss_pred cCChHHHHHHHHHHHH
Q 002995 155 KCKKPRFTQSLEEAKV 170 (860)
Q Consensus 155 k~k~~~~~~A~~ea~~ 170 (860)
++|++.|++||+||+.
T Consensus 86 ~~K~k~f~~Al~Eie~ 101 (110)
T 1ri0_A 86 PNKRKGFSEGLWEIEN 101 (110)
T ss_dssp CCCCHHHHHHHHHHHT
T ss_pred ccccHHHHHHHHHHHh
Confidence 8888999999999974
No 21
>2l89_A PWWP domain-containing protein 1; histone binding, protein binding; NMR {Schizosaccharomyces pombe}
Probab=99.85 E-value=9.1e-23 Score=185.65 Aligned_cols=94 Identities=24% Similarity=0.287 Sum_probs=77.5
Q ss_pred CCCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCcccccccccccccc--c
Q 002995 78 DCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFHL--K 155 (860)
Q Consensus 78 ~~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~~~~~~~~--k 155 (860)
+..+|++||||||||+|||||||+|++++.++. ..++.++..+.|+|+|||+++||||++++|+||.++....+.. +
T Consensus 2 ~~~~~~~GdlVwaK~~gyP~WPa~V~~~~~~p~-~v~~~~~~~~~~~V~FFg~~~~aWv~~~~l~p~~~~~~~~~~~~~k 80 (108)
T 2l89_A 2 ADDRLNFGDRILVKAPGYPWWPALLLRRKETKD-SLNTNSSFNVLYKVLFFPDFNFAWVKRNSVKPLLDSEIAKFLGSSK 80 (108)
T ss_dssp CSCCCCTTEEEEEECSSSCEEEEEEEEEEEEES-SSCSSSCEEEEEEEEETTTTEEEEECGGGEEECCHHHHHHHHHCSS
T ss_pred CCCcccCCCEEEEEeCCcCCCceEecCcccCcH-HHhhccCCCCeEEEEECCCCCEEEEchhhceeCCHHHHHHHHhccC
Confidence 357899999999999999999999999887776 4555445568899999999999999999999999764444443 3
Q ss_pred CChHHHHHHHHHHHHHH
Q 002995 156 CKKPRFTQSLEEAKVYL 172 (860)
Q Consensus 156 ~k~~~~~~A~~ea~~~~ 172 (860)
.|.+.+++|+++|.+..
T Consensus 81 ~k~k~l~~Aye~A~~~~ 97 (108)
T 2l89_A 81 RKSKELIEAYEASKTPP 97 (108)
T ss_dssp SCCHHHHHHHHHHTCGG
T ss_pred CCCHHHHHHHHHHccCC
Confidence 45589999999997663
No 22
>2gfu_A DNA mismatch repair protein MSH6; PWWP domain, tudor domain, DNA binding, DNA binding protein; HET: DNA; NMR {Homo sapiens}
Probab=99.85 E-value=4.2e-22 Score=189.08 Aligned_cols=101 Identities=21% Similarity=0.446 Sum_probs=79.9
Q ss_pred cCCCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCC-CEEEEeCCCcccccccccccccc-
Q 002995 77 DDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTH-DFARINVKQVISFLKGLLSSFHL- 154 (860)
Q Consensus 77 ~~~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~-~~awv~~~~l~~f~~~~~~~~~~- 154 (860)
.++..|++||||||||+|||||||+|++++.... .++.+...+.|+|+|||++ +||||++++|+||.++......+
T Consensus 18 ~~~~~~~~GdlVwaK~~g~P~WPa~V~~~~~~~~--~~~~~~~~~~~~V~FFg~~~~~aWv~~~~l~pf~~~~~~~~~k~ 95 (134)
T 2gfu_A 18 PTSSDFSPGDLVWAKMEGYPWWPSLVYNHPFDGT--FIREKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTGSKSKEAQKG 95 (134)
T ss_dssp CSSCCCCTTSEEEECCTTSCCEEEECCCCSSTTC--CEEESSSCEEEEEEECSSSCEEEEECGGGEEESCCTTSTTTSTT
T ss_pred CcCCCCCCCCEEEEeecCCCCCCeeecchhhhhh--hhhccCCCceEEEEECCCCCceEEECHHHcccCcchhHHHHhhc
Confidence 3567999999999999999999999999866543 3333344578999999995 79999999999999874433322
Q ss_pred ---cCChHHHHHHHHHHHHHHHhCCCch
Q 002995 155 ---KCKKPRFTQSLEEAKVYLSEQKLPR 179 (860)
Q Consensus 155 ---k~k~~~~~~A~~ea~~~~~~~~~~~ 179 (860)
+.+++.|++||++|.+++....+.+
T Consensus 96 ~~~~~~~~~~~~Ai~~A~~a~~~~~eeR 123 (134)
T 2gfu_A 96 GHFYSAKPEILRAMQRADEALNKDKIKR 123 (134)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHSSCHHHH
T ss_pred ccchhccHHHHHHHHHHHHHhcCCHHHH
Confidence 2356899999999999987654444
No 23
>3llr_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase, methylysine binding, STR genomics consortium, SGC, alternative promoter usage; HET: DNA BTB; 2.30A {Homo sapiens} SCOP: b.34.9.0
Probab=99.85 E-value=9e-22 Score=188.28 Aligned_cols=94 Identities=23% Similarity=0.461 Sum_probs=78.6
Q ss_pred cCccCCCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCccccccccccccc
Q 002995 74 ASLDDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFH 153 (860)
Q Consensus 74 ~~~~~~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~~~~~~~ 153 (860)
.+++|+..|.+||||||||+|||||||+|+++.... +.+...+.|+|+|||+++||||.+++|+||.++ ...|.
T Consensus 9 ~e~~dg~~f~~GDLVWaKvkG~PwWPa~V~~~~~~~-----k~~~~~~~~~V~FFG~~~~awv~~~~L~pf~e~-~e~f~ 82 (154)
T 3llr_A 9 PEYEDGRGFGIGELVWGKLRGFSWWPGRIVSWWMTG-----RSRAAEGTRWVMWFGDGKFSVVCVEKLMPLSSF-CSAFH 82 (154)
T ss_dssp -CCCSSCCCCTTCEEEECCTTSCCEEEEEECGGGTT-----SCCCCTTEEEEEETTTCCEEEEEGGGEEEGGGH-HHHCC
T ss_pred cccccCCCCccCCEEEEecCCCCCCCEEEecccccc-----cccCCCCEEEEEEeCCCCEEEEcHHHCcchhhh-HHHHh
Confidence 467889999999999999999999999999975432 234566899999999999999999999999996 55555
Q ss_pred cc--CChHHHHHHHHHHHHHHH
Q 002995 154 LK--CKKPRFTQSLEEAKVYLS 173 (860)
Q Consensus 154 ~k--~k~~~~~~A~~ea~~~~~ 173 (860)
.. +|+..|++||+||.+.+.
T Consensus 83 ~~~~~K~~~fr~AV~eAle~a~ 104 (154)
T 3llr_A 83 QATYNKQPMYRKAIYEVLQVAS 104 (154)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHH
T ss_pred hhhccchHHHHHHHHHHHHHHH
Confidence 43 466899999999988754
No 24
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.83 E-value=1.4e-21 Score=202.82 Aligned_cols=127 Identities=20% Similarity=0.238 Sum_probs=95.2
Q ss_pred eeEEEEEe-----cccCeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeecCcceeeccccCCc
Q 002995 696 KRLAFGKS-----GIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDDERVIDATRAGSI 770 (860)
Q Consensus 696 ~~l~v~~s-----~~~G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~~~~~iDa~~~gn~ 770 (860)
..++|..+ .++|+||||+++|++|++|.||+|+++...+++.+.. . .+...|.+..+ ...+++..+||+
T Consensus 103 ~g~eV~~~~Ry~~~~~G~Gv~A~~~I~kGE~I~ey~Geli~~t~~e~~~~---~--~~~n~f~i~~~-~~~~~~~l~~~~ 176 (247)
T 3rq4_A 103 SGFTILPCTRYSMETNGAKIVSTRAWKKNEKLELLVGCIAELREADEGLL---R--AGENDFSIMYS-TRKRSAQLWLGP 176 (247)
T ss_dssp GCEEEEECCCCTTCSSCEEEEESSCBCTTCEEEEEEEEEEECCGGGGGGC---C--TTTSCTTEEEE-TTTTEEEEEESG
T ss_pred CCcEEEeeeeeeecCCcceEEeCCccCCCCEEEEEEeEEEeCcHHHHHhh---h--ccCCcEEEEec-CCcccceeecch
Confidence 45777665 4689999999999999999999999997766655321 1 11222332222 334578889999
Q ss_pred cccCCCCCCCCeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCC-CCeEEeeCCCCCcc
Q 002995 771 AHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID-EQLACYCGFPRCRG 833 (860)
Q Consensus 771 aRfiNHSC~PN~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~~~~~-~~~~C~Cg~~~Cr~ 833 (860)
+|||||||+|||.+.. + +..+|.|+|+|||++|||||+||+..... ..+.|.|++ |..
T Consensus 177 ar~iNHSC~PN~~~~~--~-~~~~i~v~A~rdI~~GEElt~~Y~~~~~~~~~f~C~C~~--C~~ 235 (247)
T 3rq4_A 177 AAFINHDCKPNCKFVP--A-DGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCECHT--CER 235 (247)
T ss_dssp GGGCEECSSCSEEEEE--E-TTTEEEEEESSCBCTTCBCEECCCTTSSSGGGTTCCCHH--HHH
T ss_pred hhhcCCCCCCCEEEEE--e-CCCEEEEEECCcCCCCCEEEEecCchhcCCCCCEEECCC--CCC
Confidence 9999999999996543 3 34699999999999999999999987554 467788864 644
No 25
>1h3z_A Hypothetical 62.8 kDa protein C215.07C; nuclear protein, PWWP, chromatin, beta-barrel; NMR {Schizosaccharomyces pombe} SCOP: b.34.9.2
Probab=99.83 E-value=2.4e-21 Score=177.30 Aligned_cols=94 Identities=21% Similarity=0.361 Sum_probs=74.1
Q ss_pred CCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccC--CCCcEEEEEeCCCCEEEEeCCCccccccccccccccc-
Q 002995 79 CQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKIS--GGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFHLK- 155 (860)
Q Consensus 79 ~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~--~~~~~~V~FFg~~~~awv~~~~l~~f~~~~~~~~~~k- 155 (860)
..+|++||||||||+|||||||+|++++.+.. ..++.++ ..+.|+|+|||+++||||++++|+||.++.+..+..+
T Consensus 4 ~~~~~~GdlVwaK~~gyP~WPa~V~~p~~~~~-~~~~~~~~~~~~~~~V~FFg~~~~aWv~~~~l~p~~~~~~~~~~~~~ 82 (109)
T 1h3z_A 4 RVNYKPGMRVLTKMSGFPWWPSMVVTESKMTS-VARKSKPKRAGTFYPVIFFPNKEYLWTGSDSLTPLTSEAISQFLEKP 82 (109)
T ss_dssp CCCCCTTCEEEEEETTEEEEEEEECCGGGCCH-HHHHTCCCSSSCEEEEEETTTTCCEEEEGGGEEECCHHHHHHHHHSC
T ss_pred cccCCCCCEEEEEeCCcCCCCEEEcccHHHhH-HhhccCCCCCCCEEEEEEcCCCCEEEECHHHeeeCCchHHHHHhhcc
Confidence 46899999999999999999999997655543 4444333 3688999999999999999999999987644444332
Q ss_pred -CChHHHHHHHHHHHHHHH
Q 002995 156 -CKKPRFTQSLEEAKVYLS 173 (860)
Q Consensus 156 -~k~~~~~~A~~ea~~~~~ 173 (860)
+|++.+.+|+++|.+...
T Consensus 83 ~~k~k~l~~Ay~~A~~~~~ 101 (109)
T 1h3z_A 83 KPKTASLIKAYKMAQSTPD 101 (109)
T ss_dssp SSCCHHHHHHHHHHHHCCS
T ss_pred ccCCHHHHHHHHHHhccCC
Confidence 356899999999877643
No 26
>1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel followed by five-helix bundle; HET: DNA; 1.80A {Mus musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A*
Probab=99.82 E-value=1e-20 Score=180.98 Aligned_cols=94 Identities=22% Similarity=0.382 Sum_probs=76.3
Q ss_pred CccCCCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCcccccccccccccc
Q 002995 75 SLDDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFHL 154 (860)
Q Consensus 75 ~~~~~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~~~~~~~~ 154 (860)
...++..|++||||||||+|||||||+|++++... +++...+.|+|+|||+++||||++++|+||.+. ...+..
T Consensus 5 ~~~~~~~~~~GDlVWaKvkGyPwWPa~V~~~~~~~-----~~~~~~~~~~V~FFG~~~~awv~~~~L~p~~~~-~e~f~~ 78 (147)
T 1khc_A 5 EYQDDKEFGIGDLVWGKIKGFSWWPAMVVSWKATS-----KRQAMPGMRWVQWFGDGKFSEISADKLVALGLF-SQHFNL 78 (147)
T ss_dssp CCCSSSSCCTTCEEEEEETTTEEEEEEEECGGGTT-----SCCCCTTEEEEEETTTCCEEEEEGGGCEETTSH-HHHCCH
T ss_pred ccCCCccCcCCCEEEEecCCcCCCCEEeccchhhh-----cccCCCCeEEEEEecCCCEEEEcHHHCccchHH-HHHHhh
Confidence 45678899999999999999999999999975432 223345789999999999999999999999874 555654
Q ss_pred c--CChHHHHHHHHHHHHHHHh
Q 002995 155 K--CKKPRFTQSLEEAKVYLSE 174 (860)
Q Consensus 155 k--~k~~~~~~A~~ea~~~~~~ 174 (860)
+ .|++.|++||++|.+.+..
T Consensus 79 ~~~~K~~~f~kAv~eA~e~A~~ 100 (147)
T 1khc_A 79 ATFNKLVSYRKAMYHTLEKARV 100 (147)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHH
T ss_pred hccccHHHHHHHHHHHHHHHHH
Confidence 2 3558899999999877654
No 27
>3pfs_A Bromodomain and PHD finger-containing protein 3; structural genomics, structural genomics consortium, SGC, PW domain, protein binding; 1.90A {Homo sapiens} PDB: 3lyi_A*
Probab=99.75 E-value=4.9e-19 Score=168.03 Aligned_cols=93 Identities=23% Similarity=0.394 Sum_probs=66.0
Q ss_pred cCCCCCCCCCEEEEEecccCCCceEeeCCCCcCc-------------ccccc------ccCCCCcEEEEEeCC-CCEEEE
Q 002995 77 DDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGD-------------YKGLN------KISGGRSIPVQFFGT-HDFARI 136 (860)
Q Consensus 77 ~~~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~-------------~~~~~------~~~~~~~~~V~FFg~-~~~awv 136 (860)
++...|+||||||||++|||||||+|+++++... ..+++ .+.+.+.|+|+|||+ ++|+||
T Consensus 32 ~~~~~~~pgdlVWAK~~GyPwwPa~Iidp~~p~~g~~~~~v~ip~pP~~Vlk~~~~~~~~~~~~~ylV~FFd~~~t~aWV 111 (158)
T 3pfs_A 32 EDRGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQAEAGEKLFLVLFFDNKRTWQWL 111 (158)
T ss_dssp SCCSCCCTTCEEEEECTTSCEEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHHTSCEEEEEECSTTCCEEEE
T ss_pred CcCCCCCCCCEEEEecCCCCCCCEEEcCCCCccccccccccccCCChHHHHhhcccccccCCCCEEEEEEcCCCCceEee
Confidence 4446799999999999999999999999887542 12222 123578899999997 689999
Q ss_pred eCCCcccccccccccc--cccCChHHHHHHHHHHH
Q 002995 137 NVKQVISFLKGLLSSF--HLKCKKPRFTQSLEEAK 169 (860)
Q Consensus 137 ~~~~l~~f~~~~~~~~--~~k~k~~~~~~A~~ea~ 169 (860)
+.++|+||........ ....|+..+++||++|-
T Consensus 112 ~~~~L~Pl~~d~~~D~~kl~e~Kks~~rKAl~~AY 146 (158)
T 3pfs_A 112 PRDKVLPLGVEDTVDKLKMLEGRKTSIRKSVQVAY 146 (158)
T ss_dssp EGGGEEECSSCHHHHHHHHTTTTTSTHHHHHHHHH
T ss_pred ccccEeecCCchhhhhhhhccCCCHHHHHHHHHHH
Confidence 9999999985421111 12344444555555553
No 28
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=99.75 E-value=2e-18 Score=169.22 Aligned_cols=113 Identities=23% Similarity=0.244 Sum_probs=84.0
Q ss_pred ccceeEEEEEeccc--CeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeecC--c---ceeecc
Q 002995 693 TFRKRLAFGKSGIH--GFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD--E---RVIDAT 765 (860)
Q Consensus 693 ~~~~~l~v~~s~~~--G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~~--~---~~iDa~ 765 (860)
+..+.|.|++|.++ |+||||+++|++|+++++|.|++++..+++... .+.|+|.+.. . ++||++
T Consensus 24 sLP~~l~l~~S~i~~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~~~---------~~~y~w~i~~~~G~~~~~IDa~ 94 (170)
T 3ep0_A 24 VLPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICK---------NNNLMWEVFNEDGTVRYFIDAS 94 (170)
T ss_dssp SCCTTEEEEECSSSSCSEEEEESSCBCTTCEEEEECCEEECC-------------------CEEEEECTTSSEEEEEECC
T ss_pred CCCCCeEEEEcCCCCCceEEEECcccCCCCEEEecCceecCHHHhcccc---------CCceEEEEecCCCcEEEEEECC
Confidence 34677999999777 899999999999999999999999987765422 2468888742 2 589999
Q ss_pred c--cCCccccCCCCCC---CCeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCC
Q 002995 766 R--AGSIAHLINHSCE---PNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSI 818 (860)
Q Consensus 766 ~--~gn~aRfiNHSC~---PN~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~~~~ 818 (860)
. .||.+|||||+|. +|+.+.. + ..+|.++|+|||.+||||+++|+..+.
T Consensus 95 ~e~~~NWmR~Vn~A~~~~eqNl~a~q--~--~~~I~~~a~RdI~pGeELlvwYg~~y~ 148 (170)
T 3ep0_A 95 QEDHRSWMTYIKCARNEQEQNLEVVQ--I--GTSIFYKAIEMIPPDQELLVWYGNSHN 148 (170)
T ss_dssp ------GGGGCEECSSTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEECC---
T ss_pred CCCCcceeeeEEecCCcccCCeeeEE--E--CCEEEEEECcCcCCCCEEEEeeCHHHH
Confidence 8 8999999999996 7977654 2 369999999999999999999987653
No 29
>3l42_A Peregrin; transcription regulation, histone H3 acetylation, chromatin modification, structural genomics, structural genomics CONS SGC, activator; 1.30A {Homo sapiens} PDB: 3mo8_A* 2x4w_A* 2x35_A* 2x4x_A* 2x4y_A*
Probab=99.73 E-value=3.8e-18 Score=156.68 Aligned_cols=95 Identities=16% Similarity=0.225 Sum_probs=68.0
Q ss_pred CCCCCCCEEEEEecccCCCceEeeCCCCcCc-------------ccccc------ccCCCCcEEEEEeCC-CCEEEEeCC
Q 002995 80 QELEPGDIIWAKLTGHAMWPAIVVDESLIGD-------------YKGLN------KISGGRSIPVQFFGT-HDFARINVK 139 (860)
Q Consensus 80 ~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~-------------~~~~~------~~~~~~~~~V~FFg~-~~~awv~~~ 139 (860)
..|++|||||||++|||||||+|+++.+... ..+++ .......|+|+|||+ ++|+||+.+
T Consensus 4 ~~~~~~dlVWAK~~gyP~wPa~Iidp~~p~~g~~~~g~~ip~pP~~Vl~~~~~~~~~~~~~~y~V~FFd~~~t~aWv~~~ 83 (130)
T 3l42_A 4 SPLDALDLVWAKCRGYPSYPALIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQMTQEAREHLYLVLFFDNKRTWQWLPRT 83 (130)
T ss_dssp SSSCTTCEEEECCTTSCCEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHCSSCEEEEEESSTTCCEEEEEGG
T ss_pred ccCCCCCEEEEecccCCCCCEEEcCCCCccccccccCccCCCChHHHHhhcccccccCCCcEEEEEeCCCCCceEeeccc
Confidence 5799999999999999999999999875531 11222 133467899999996 789999999
Q ss_pred Cccccccccccccc---cc---CChHHHHHHHHHHHHHHHh
Q 002995 140 QVISFLKGLLSSFH---LK---CKKPRFTQSLEEAKVYLSE 174 (860)
Q Consensus 140 ~l~~f~~~~~~~~~---~k---~k~~~~~~A~~ea~~~~~~ 174 (860)
+|+||..+...... .. +.++..+.|++.|.+++..
T Consensus 84 ~i~pl~~d~~~D~~kl~~s~K~~~rKav~~AYe~A~~~~~~ 124 (130)
T 3l42_A 84 KLVPLGVNQDLDKEKMLEGRKSNIRKSVQIAYHRALQHRSK 124 (130)
T ss_dssp GEEESSSCHHHHHHHHTCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeecCCchhhHHHhcccCCCHHHHHHHHHHHHHHHHHHhh
Confidence 99999855212111 12 2236667777777766543
No 30
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=99.70 E-value=1.4e-17 Score=166.58 Aligned_cols=127 Identities=17% Similarity=0.184 Sum_probs=99.9
Q ss_pred hhccceeEEEEEecc--cCeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeecC----cceeec
Q 002995 691 KETFRKRLAFGKSGI--HGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD----ERVIDA 764 (860)
Q Consensus 691 ~~~~~~~l~v~~s~~--~G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~~----~~~iDa 764 (860)
.......|.|+.|.+ +|+||||+++|++|+.+++|.|++++..+++... .+.|+|.+.. ..+||+
T Consensus 53 ~~SLP~~L~lr~S~i~~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e~~~~~---------~~~y~w~i~~~g~~~~~IDa 123 (196)
T 3dal_A 53 EASLPRNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPKNA---------NRKYFWRIYSRGELHHFIDG 123 (196)
T ss_dssp HHTCCTTEEEEECTTSCCEEEEEESSCBCTTEEECCCCCEEECTTTCC------------CCTTEEEEEETTEEEEEEEC
T ss_pred HhcCCCCeEEEECCCCCceeEEEEccccCCCCEEEeccceEcCHHHhhhcc---------CCcceeeeccCCCEEEEEEC
Confidence 345677899999977 8999999999999999999999999987653221 2468888742 268999
Q ss_pred cc--cCCccccCCCCCC---CCeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCCCCeEEeeCCCCCcccc
Q 002995 765 TR--AGSIAHLINHSCE---PNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSIDEQLACYCGFPRCRGVV 835 (860)
Q Consensus 765 ~~--~gn~aRfiNHSC~---PN~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~~~~~~~~~C~Cg~~~Cr~~~ 835 (860)
+. .||.+|||||+|. +|+.+... ..+|.++|+|||.+||||+++|+.+ +...+|.+.|+..|
T Consensus 124 s~e~~gNWmRfVn~A~~~~eqNl~a~q~----~~~I~y~a~RdI~pGeELlvwYg~~-----Y~~~lg~p~~~~~~ 190 (196)
T 3dal_A 124 FNEEKSNWMRYVNPAHSPREQNLAACQN----GMNIYFYTIKPIPANQELLVWYCRD-----FAERLHYPYPGELT 190 (196)
T ss_dssp CCTTSSCGGGGCEECSSTTTCCEEEEEE----TTEEEEEESSCBCTTCBCEEEECHH-----HHHHTTCCCTTCCC
T ss_pred CCCCCCceEEeEEecCCcccCCcEEEEE----CCEEEEEECcccCCCCEEEEecCHH-----HHHHcCCCCCHHHH
Confidence 87 8999999999996 69876542 4789999999999999999999843 34455555555443
No 31
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=99.70 E-value=3.1e-17 Score=158.77 Aligned_cols=116 Identities=16% Similarity=0.109 Sum_probs=84.4
Q ss_pred hccceeEEEEEe-cccCeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeecC----cceeeccc
Q 002995 692 ETFRKRLAFGKS-GIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRIDD----ERVIDATR 766 (860)
Q Consensus 692 ~~~~~~l~v~~s-~~~G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~~----~~~iDa~~ 766 (860)
.+....|.|+.| +++|+||||+++|++|+.+++|.|++++..+++.+.. ....|+|.+.. ..+||++.
T Consensus 19 ~slP~~l~l~~S~~~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~~~-------~~~~y~w~i~~~~~~~~~iD~~~ 91 (151)
T 3db5_A 19 LSLPKQLVLRQSIVGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTD-------KAVNHIWKIYHNGVLEFCIITTD 91 (151)
T ss_dssp HTCCTTEEEEECC---CEEEEESSCBCTTCEECCCCCEEEC------------------CCSEEEEEETTEEEEEEECCC
T ss_pred hcCCCCeEEEEccCCCceEEEEecccCCCCEEEEeccEEeCHHHhhcccc-------cCCCceEEEEeCCCEEEEEECcC
Confidence 455677889886 4579999999999999999999999999987766532 11357776532 35899998
Q ss_pred --cCCccccCCCCCCC---CeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCC
Q 002995 767 --AGSIAHLINHSCEP---NCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSI 818 (860)
Q Consensus 767 --~gn~aRfiNHSC~P---N~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~~~~ 818 (860)
.||.+|||||+|.+ |+.+... ..+|.+.|+|||.+||||+++|+..+.
T Consensus 92 ~~~~NWmR~Vn~A~~~~eqNl~a~q~----~~~I~~~a~rdI~pGeELlv~Yg~~y~ 144 (151)
T 3db5_A 92 ENECNWMMFVRKARNREEQNLVAYPH----DGKIFFCTSQDIPPENELLFYYSRDYA 144 (151)
T ss_dssp TTTSCGGGGCEECSSTTTCCEEEEEE----TTEEEEEESSCBCTTCBCEEEECC---
T ss_pred CCCCcceeEEEecCCcccCceEEEEE----CCEEEEEEccccCCCCEEEEecCHHHH
Confidence 59999999999965 9877542 368999999999999999999987653
No 32
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=99.55 E-value=2.6e-15 Score=152.95 Aligned_cols=132 Identities=17% Similarity=0.114 Sum_probs=91.6
Q ss_pred hhccceeEEEEEecccCeeEEee-ecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeeec--C--cceeecc
Q 002995 691 KETFRKRLAFGKSGIHGFGIFAK-HPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRID--D--ERVIDAT 765 (860)
Q Consensus 691 ~~~~~~~l~v~~s~~~G~GvfA~-~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~~--~--~~~iDa~ 765 (860)
..+....|.|++|.++|.|||+. +.|++|+.+++|.|++++..+++ ..|+|.+. . ..+||++
T Consensus 67 ~lSLP~~L~vr~S~i~~~Gv~~~~~~IpkGt~fGPY~Ge~~s~~ea~-------------~~y~wei~~~~g~~~~IDgs 133 (237)
T 3ray_A 67 ALTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSA-------------GFFSWLIVDKNNRYKSIDGS 133 (237)
T ss_dssp HHTCCTTEEEEECTTSCEEEEECSSCBCTTEEECCCCSEEECC------------------CCEEEEECTTSCEEEEECC
T ss_pred HhcCCCCeEEEEcCCCCcceEEEeCcCCCCCEEEecccEEcChHHcc-------------ccceEEEEcCCCcEEEEecC
Confidence 44567789999999999999987 89999999999999999875432 23666553 2 2489999
Q ss_pred c--cCCccccCCCCCC---CCeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCCCCeEEeeCCCCCccccCCChH
Q 002995 766 R--AGSIAHLINHSCE---PNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSIDEQLACYCGFPRCRGVVNDTEA 840 (860)
Q Consensus 766 ~--~gn~aRfiNHSC~---PN~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~~~~~~~~~C~Cg~~~Cr~~~~~~~~ 840 (860)
. .||++|||||+|. +|+.+.. . ..+|.++|+|+|.+||||+++|+..+ ...+-+.|++..|++...+...
T Consensus 134 de~~gNWmRfVn~Ar~~~EqNL~A~q--~--~~~Iyy~a~RdI~pGeELlVwYg~~Y-~~~l~~~~~~~~~~~~~~~~k~ 208 (237)
T 3ray_A 134 DETKANWMRYVVISREEREQNLLAFQ--H--SERIYFRACRDIRPGEWLRVWYSEDY-MKRLHSMSQETIHRNLARGEKR 208 (237)
T ss_dssp CTTTSCGGGGCEECCCTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEECHHH-HHHHCC----------------
T ss_pred CCCCCcceeEEEcCCCcccccceeEE--e--CCEEEEEEccccCCCCEEEEeeCHHH-HHHhcccccchhcccccchhhc
Confidence 7 7999999999996 5876653 2 47899999999999999999998643 2356677888899888777665
No 33
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=99.51 E-value=5.2e-15 Score=128.50 Aligned_cols=75 Identities=33% Similarity=0.724 Sum_probs=61.6
Q ss_pred hhhccccCccceecCCc-ceeeEEcCCCCcCccccchhhhhcCeeEEEeccccccccccCCCccccccceeeccccCCCc
Q 002995 501 RVSKDRWKLLCSICGVS-YGACIQCSNTTCRVAYHPLCARAAGLCVELEDEDRLNLLSLDEDDEDQCIRLLSFCKKHKQP 579 (860)
Q Consensus 501 ~i~~~~~~~~C~~C~~~-~Ga~iqC~~~~C~~~fH~~CA~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~H~~~ 579 (860)
.|+++||+++|.+|+++ .||||||..++|.++||++||+++|+.|++...+.. ..+.....+++.+||++|+|+
T Consensus 10 NIp~~R~~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~~aGl~~~~~~~~~~-----~~~~~~~~v~~~~yC~~HsPp 84 (87)
T 2lq6_A 10 NIPPARWKLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQKAGLYMKMEPVKEL-----TGGGTTFSVRKTAYCDVHTPP 84 (87)
T ss_dssp CCCCCCCCCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHHHHTCCEEEEEEEEC-----TTTSCEEEEEEEECCGGGSSS
T ss_pred CCChHHhcCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHHHCCCceEeeccccc-----ccCCccccceECeECcCCCCc
Confidence 48899999999999986 599999999999999999999999999988754221 122234456789999999987
Q ss_pred c
Q 002995 580 L 580 (860)
Q Consensus 580 ~ 580 (860)
.
T Consensus 85 g 85 (87)
T 2lq6_A 85 G 85 (87)
T ss_dssp S
T ss_pred C
Confidence 4
No 34
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=99.43 E-value=7.9e-14 Score=134.54 Aligned_cols=105 Identities=13% Similarity=0.107 Sum_probs=80.5
Q ss_pred ccceeEEEEEecccCeeEEeeecCCCCCEEEEecCEeeChhhHhhhHHHhhhcccCCcceeeee------------cCcc
Q 002995 693 TFRKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGELVRPSIADRREHFIYNSLVGAGTYMFRI------------DDER 760 (860)
Q Consensus 693 ~~~~~l~v~~s~~~G~GvfA~~~i~~g~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~~y~~~~------------~~~~ 760 (860)
+....|.|.+ .|+||||++.|++|+.+++|.|++++..++.. ..|++.+ +...
T Consensus 20 SLP~~L~i~~---~g~GVfA~~~IpkGt~fGPy~Ge~~~~~e~~~------------~~~~~~v~~~d~~~~~~~~~~~~ 84 (152)
T 3ihx_A 20 SLPLVLYIDR---FLGGVFSKRRIPKRTQFGPVEGPLVRGSELKD------------CYIHLKVSLDKGDRKERDLHEDL 84 (152)
T ss_dssp TSCTTEEECT---TTCSEEESSCBCSSCEECCCCSCEECSTTCCS------------SSCCCBC---------------C
T ss_pred cCCcceEEee---cCCeEEECceecCCCEEEeeccEEcCHHHhcc------------CcceEEEEccccccccccCCccE
Confidence 3445566654 58999999999999999999999999875422 1122211 1357
Q ss_pred eeeccc--cCCccccCCCCCC---CCeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCCC
Q 002995 761 VIDATR--AGSIAHLINHSCE---PNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFF 816 (860)
Q Consensus 761 ~iDa~~--~gn~aRfiNHSC~---PN~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~~ 816 (860)
+||++. .||.+|||||+|. +|+.+.. ...+|.+.|+|+|.+||||.++|+..
T Consensus 85 ~iD~~~~~~~NWmr~vn~a~~~~eqNl~a~q----~~~~I~~~~~r~I~pGeELlv~Y~~~ 141 (152)
T 3ihx_A 85 WFELSDETLCNWMMFVRPAQNHLEQNLVAYQ----YGHHVYYTTIKNVEPKQELKVWYAAS 141 (152)
T ss_dssp EECCCCTTTSCGGGGCCBCCSTTTCCEEEEE----CSSSEEEEESSCBCTTCBCCEEECHH
T ss_pred EEEccCCCCCcceeeeeccCCccCCCcEEEE----eCCeEEEEEeeecCCCCEEEEechHH
Confidence 899987 6999999999997 6877643 34789999999999999999999753
No 35
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.88 E-value=5.4e-10 Score=92.97 Aligned_cols=52 Identities=37% Similarity=0.827 Sum_probs=46.6
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~ 446 (860)
.++..|.||...++.+.|.||.||+|..+||+.|||+..+|++ .|+|+.|..
T Consensus 14 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g-~W~C~~C~~ 65 (71)
T 2ku3_A 14 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEG-QWLCRHCLQ 65 (71)
T ss_dssp CSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSS-CCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCC-CcCCccCcC
Confidence 5568999999988777889999999999999999998877777 899999975
No 36
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.72 E-value=2.8e-09 Score=92.76 Aligned_cols=53 Identities=36% Similarity=0.814 Sum_probs=46.8
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccCC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 447 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~~ 447 (860)
.++..|.||...++.+.|.||.||.|..+||+.|||+..+|.+ .|+|+.|...
T Consensus 23 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g-~W~C~~C~~~ 75 (88)
T 2l43_A 23 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEG-QWLCRHCLQS 75 (88)
T ss_dssp CCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSS-CCCCHHHHHH
T ss_pred CCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCC-ceECccccCc
Confidence 4568999999887777789999999999999999998877776 9999999864
No 37
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.55 E-value=2.7e-08 Score=82.03 Aligned_cols=54 Identities=24% Similarity=0.515 Sum_probs=44.4
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceeccccccccc----c-CCCCceeeecccCCC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELE----P-VNGVLWLCNLCRPGA 448 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~----~-~~~~~W~C~~C~~~~ 448 (860)
.++..|.||....+.+.+.||+|+.|..+||+.||+... + +.+ .|+|..|....
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~-~W~C~~C~~~~ 62 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDE-KWLCRQCVFAT 62 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSC-CCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCC-CEECCCCcCcc
Confidence 345799999988767778899999999999999999643 1 445 89999998643
No 38
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.47 E-value=4.7e-08 Score=112.72 Aligned_cols=60 Identities=35% Similarity=0.509 Sum_probs=44.7
Q ss_pred ccccCCCCCCCCeeEEEEEECCe-----------eEEEEEEccCCCCCCeEEEecCCCCCC-----------CCeEEeeC
Q 002995 770 IAHLINHSCEPNCYSRVISVNGD-----------EHIIIFAKRDIKQWEELTYDYRFFSID-----------EQLACYCG 827 (860)
Q Consensus 770 ~aRfiNHSC~PN~~~~~~~~~~~-----------~~i~i~A~RdI~~GEELt~dY~~~~~~-----------~~~~C~Cg 827 (860)
.+.||||||.|||.+.. .++. .++.|+|+|||++|||||++|...... ..|.|.|
T Consensus 200 ~~s~~NHSC~PN~~~~~--~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~~~~~~~R~~~L~~~~~F~C~C- 276 (490)
T 3n71_A 200 NLGLVNHDCWPNCTVIF--NNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLHLSEERRRQLKKQYYFDCSC- 276 (490)
T ss_dssp TGGGCEECSSCSEEEEE--ECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCSCSCHHHHHHHHHHHHSSCCCC-
T ss_pred hhhhcccCCCCCeeEEe--cCCccccccccccccceEEEEECCCCCCCCEEEEeecCCCCCHHHHHHHHHCCCCeEeeC-
Confidence 45678999999987654 3321 299999999999999999999865432 2566666
Q ss_pred CCCCcc
Q 002995 828 FPRCRG 833 (860)
Q Consensus 828 ~~~Cr~ 833 (860)
+.|..
T Consensus 277 -~~C~~ 281 (490)
T 3n71_A 277 -EHCQK 281 (490)
T ss_dssp -HHHHH
T ss_pred -CCCCC
Confidence 56755
No 39
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.46 E-value=3.7e-08 Score=111.85 Aligned_cols=61 Identities=36% Similarity=0.558 Sum_probs=45.1
Q ss_pred CccccCCCCCCCCeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCCC---------CeEEeeCCCCCcc
Q 002995 769 SIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSIDE---------QLACYCGFPRCRG 833 (860)
Q Consensus 769 n~aRfiNHSC~PN~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~~~~~~---------~~~C~Cg~~~Cr~ 833 (860)
..++||||||.|||.+... ..++.|+|+|||++|||||++|....... .+.+.|+++.|..
T Consensus 200 ~~~s~~NHsC~PN~~~~~~----~~~~~~~a~r~I~~GeEl~isY~~~~~~~~~R~~~L~~~~~F~C~C~~C~~ 269 (429)
T 3qwp_A 200 PSISLLNHSCDPNCSIVFN----GPHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFECDCFRCQT 269 (429)
T ss_dssp TTGGGCEECSSCSEEEEEE----TTEEEEEECSCBCTTCEEEECCSCSSCCHHHHHHHHHHHHCCCCCSHHHHH
T ss_pred hhhHhhCcCCCCCeEEEEe----CCEEEEEEeeeECCCCEEEEEecCCCCCHHHHHHHHhccCCeEeeCCCCCC
Confidence 4578899999999876542 35799999999999999999998654331 2334444466765
No 40
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.43 E-value=7.4e-08 Score=83.86 Aligned_cols=51 Identities=22% Similarity=0.511 Sum_probs=43.2
Q ss_pred CCCccccccCCcccCCCeeEEccccCceeccccccccc------cCCCCceeeecccC
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELE------PVNGVLWLCNLCRP 446 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~------~~~~~~W~C~~C~~ 446 (860)
.+..|.||...++...|.||+||.|..++|+.||+... ++.+ .|+|..|..
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g-~W~C~~C~~ 71 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRL-VWYCARCTR 71 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTC-CCCCHHHHH
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCC-CeeCccccc
Confidence 45799999998776678899999999999999999543 4555 899999975
No 41
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.35 E-value=1.4e-07 Score=107.12 Aligned_cols=53 Identities=25% Similarity=0.319 Sum_probs=42.0
Q ss_pred ccccCCCCCCCCeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCCCCCC-----------CCeEEee
Q 002995 770 IAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSID-----------EQLACYC 826 (860)
Q Consensus 770 ~aRfiNHSC~PN~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~~~~~-----------~~~~C~C 826 (860)
.+.|+||||.|||.+.. . ..++.|+|+|||++|||||++|...... .+|.|.|
T Consensus 201 ~~s~~NHsC~PN~~~~~--~--~~~~~~~a~r~I~~Geel~i~Y~~~~~~~~~R~~~L~~~~~F~C~C 264 (433)
T 3qww_A 201 DVALMNHSCCPNVIVTY--K--GTLAEVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCEC 264 (433)
T ss_dssp TGGGSEECSSCSEEEEE--E--TTEEEEEESSCBCTTCEEEECCSCTTSCHHHHHHHHHHHHSCCCCS
T ss_pred cccccCCCCCCCceEEE--c--CCEEEEEeccCcCCCCEEEEeecCCcCCHHHHHHHHhCcCCEEeEC
Confidence 45678999999987643 2 2478999999999999999999865432 3678888
No 42
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.27 E-value=8.1e-07 Score=81.13 Aligned_cols=50 Identities=20% Similarity=0.480 Sum_probs=39.4
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceeccccccccccC-CCCceeeeccc
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPV-NGVLWLCNLCR 445 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~-~~~~W~C~~C~ 445 (860)
.+++.|.||...++. +.||.|+.|...+|..|.+....+ ....|+|..|.
T Consensus 5 ~~~~~C~~C~~~g~~--~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 5 SSGANCAVCDSPGDL--LDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCCSCBTTTCCCCCT--TTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCCcCCCCCCCC--cCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 356799999987643 458999999999999999965432 23489999996
No 43
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.27 E-value=9.9e-07 Score=79.14 Aligned_cols=74 Identities=24% Similarity=0.495 Sum_probs=59.1
Q ss_pred cCCCccccccCCcccCCCeeEEcc--ccCceeccccccccccCCCCceeeecccCCC--CCCCCCccccCC------CCC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCD--KCRMMVHARCYGELEPVNGVLWLCNLCRPGA--PEPPPPCCLCPV------VGG 463 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~--~C~~~vH~~CYg~~~~~~~~~W~C~~C~~~~--~~~~~~C~lC~~------~gG 463 (860)
.+++.|.||... ..||.|| .|...+|..|+++..+|.| .|+|+.|.-.. ....+.|.+||. ..|
T Consensus 13 ~~~~~C~~C~~~-----G~ll~CD~~~Cp~~fH~~Cl~L~~~P~g-~W~Cp~c~C~~C~k~~~~~C~~Cp~sfC~~c~~g 86 (107)
T 4gne_A 13 MHEDYCFQCGDG-----GELVMCDKKDCPKAYHLLCLNLTQPPYG-KWECPWHQCDECSSAAVSFCEFCPHSFCKDHEKG 86 (107)
T ss_dssp SSCSSCTTTCCC-----SEEEECCSTTCCCEECTGGGTCSSCCSS-CCCCGGGBCTTTCSBCCEECSSSSCEECTTTCTT
T ss_pred CCCCCCCcCCCC-----CcEeEECCCCCCcccccccCcCCcCCCC-CEECCCCCCCcCCCCCCcCcCCCCcchhhhccCC
Confidence 456799999853 3499999 8999999999998888877 89999886322 224578999994 679
Q ss_pred CceecCCCce
Q 002995 464 AMKPTTDGRW 473 (860)
Q Consensus 464 alk~t~~g~w 473 (860)
+|+.+....|
T Consensus 87 ~l~~~~~~~~ 96 (107)
T 4gne_A 87 ALVPSALEGR 96 (107)
T ss_dssp SCEECTTTTC
T ss_pred cceecCCCCc
Confidence 9999887777
No 44
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.24 E-value=4.8e-07 Score=70.34 Aligned_cols=46 Identities=33% Similarity=0.886 Sum_probs=38.3
Q ss_pred ccccccCCcccCCCeeEEccccCceecccccc--ccccCCCCceeeecccC
Q 002995 398 KCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 398 ~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg--~~~~~~~~~W~C~~C~~ 446 (860)
.|.||+..++ .+.||.||.|...+|+.|++ +..+|.+ .|+|..|..
T Consensus 2 ~C~vC~~~~~--~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g-~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGE--DDKLILCDECNKAFHLFCLRPALYEVPDG-EWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSC--CSCCEECTTTCCEECHHHHCTTCCSCCSS-CCSCTTTSC
T ss_pred CCCCCCCCCC--CCCEEECCCCChhhCcccCCCCcCCCCCC-cEECcCccc
Confidence 6999998654 45699999999999999995 5566666 899999975
No 45
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.13 E-value=1.1e-06 Score=80.54 Aligned_cols=48 Identities=19% Similarity=0.468 Sum_probs=37.6
Q ss_pred CccccccCCcc-----cCCCeeEEccccCceecccccccc-----ccCCCCceeeeccc
Q 002995 397 DKCSVCHMDEE-----YQNNLFLQCDKCRMMVHARCYGEL-----EPVNGVLWLCNLCR 445 (860)
Q Consensus 397 ~~C~vC~~~~~-----~~~n~ll~C~~C~~~vH~~CYg~~-----~~~~~~~W~C~~C~ 445 (860)
+.|.+|..++. .+...||.|+.|...+|..|.+.. .++.+ .|.|..|+
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~-~W~C~~C~ 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTY-KWQCIECK 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHT-TCCCGGGC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCC-ccCccccC
Confidence 58999987652 234579999999999999999864 23444 89999996
No 46
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.12 E-value=1.1e-06 Score=80.18 Aligned_cols=49 Identities=22% Similarity=0.552 Sum_probs=38.1
Q ss_pred CCccccccCCcc----cCCCeeEEccccCceecccccccc-----ccCCCCceeeeccc
Q 002995 396 LDKCSVCHMDEE----YQNNLFLQCDKCRMMVHARCYGEL-----EPVNGVLWLCNLCR 445 (860)
Q Consensus 396 ~~~C~vC~~~~~----~~~n~ll~C~~C~~~vH~~CYg~~-----~~~~~~~W~C~~C~ 445 (860)
...|.+|.+.+. .....||.|+.|+..+|.+|++.. .++. ..|+|..|+
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~-~~W~C~~C~ 62 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKA-LRWQCIECK 62 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHT-SCCCCTTTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhc-cccccccCC
Confidence 368999988642 234579999999999999999852 2333 489999997
No 47
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.08 E-value=1.8e-06 Score=70.85 Aligned_cols=49 Identities=31% Similarity=0.714 Sum_probs=40.1
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceecccccc--ccccCCCCceeeecccCCC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRPGA 448 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg--~~~~~~~~~W~C~~C~~~~ 448 (860)
.++..|.||...+ .||.||.|...+|..|++ +..+|.+ .|+|..|....
T Consensus 6 ~~~~~C~vC~~~g-----~ll~CD~C~~~fH~~Cl~ppl~~~P~g-~W~C~~C~~~~ 56 (66)
T 1xwh_A 6 KNEDECAVCRDGG-----ELICCDGCPRAFHLACLSPPLREIPSG-TWRCSSCLQAT 56 (66)
T ss_dssp SCCCSBSSSSCCS-----SCEECSSCCCEECTTTSSSCCSSCCSS-CCCCHHHHHTC
T ss_pred CCCCCCccCCCCC-----CEEEcCCCChhhcccccCCCcCcCCCC-CeECccccCcc
Confidence 4567999998652 499999999999999999 4556665 89999998643
No 48
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.07 E-value=1.8e-06 Score=69.62 Aligned_cols=48 Identities=33% Similarity=0.722 Sum_probs=39.1
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceecccccc--ccccCCCCceeeecccCC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRPG 447 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg--~~~~~~~~~W~C~~C~~~ 447 (860)
.++..|.||... +.||.||.|..++|+.|++ +..+|.+ .|+|..|...
T Consensus 7 ~~~~~C~vC~~~-----g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g-~W~C~~C~~~ 56 (61)
T 1mm2_A 7 HHMEFCRVCKDG-----GELLCCDTCPSSYHIHCLNPPLPEIPNG-EWLCPRCTCP 56 (61)
T ss_dssp SSCSSCTTTCCC-----SSCBCCSSSCCCBCSSSSSSCCSSCCSS-CCCCTTTTTT
T ss_pred CCCCcCCCCCCC-----CCEEEcCCCCHHHcccccCCCcCcCCCC-ccCChhhcCc
Confidence 445789999864 2499999999999999999 4556665 8999999864
No 49
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.05 E-value=1.7e-06 Score=75.79 Aligned_cols=50 Identities=32% Similarity=0.618 Sum_probs=41.5
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceecccccc--ccccCCCCceeeecccC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg--~~~~~~~~~W~C~~C~~ 446 (860)
.++..|.||....+ .+.||.||.|...+|+.|++ +..+|.+ .|+|..|..
T Consensus 14 ~~~~~C~vC~~~~~--~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g-~W~C~~C~~ 65 (92)
T 2e6r_A 14 IDSYICQVCSRGDE--DDKLLFCDGCDDNYHIFCLLPPLPEIPRG-IWRCPKCIL 65 (92)
T ss_dssp CCCCCCSSSCCSGG--GGGCEECTTTCCEECSSSSSSCCSSCCSS-CCCCHHHHH
T ss_pred cCCCCCccCCCcCC--CCCEEEcCCCCchhccccCCCCcccCCCC-CcCCccCcC
Confidence 45578999998754 35699999999999999998 5556766 899999975
No 50
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.04 E-value=2.2e-06 Score=67.91 Aligned_cols=47 Identities=32% Similarity=0.787 Sum_probs=38.7
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceecccccc--ccccCCCCceeeecccC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg--~~~~~~~~~W~C~~C~~ 446 (860)
.++..|.||... +.||.|+.|...+|..|++ +..+|.+ .|+|..|..
T Consensus 7 ~~~~~C~vC~~~-----g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g-~W~C~~C~~ 55 (56)
T 2yql_A 7 GHEDFCSVCRKS-----GQLLMCDTCSRVYHLDCLDPPLKTIPKG-MWICPRCQD 55 (56)
T ss_dssp SSCCSCSSSCCS-----SCCEECSSSSCEECSSSSSSCCCSCCCS-SCCCHHHHC
T ss_pred CCCCCCccCCCC-----CeEEEcCCCCcceECccCCCCcCCCCCC-ceEChhhhC
Confidence 345799999875 3599999999999999999 4556665 899999964
No 51
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.03 E-value=2.4e-06 Score=69.86 Aligned_cols=47 Identities=23% Similarity=0.440 Sum_probs=38.0
Q ss_pred CCccccccCCcccCCCeeEEccccCceecccccc--ccccCCCCceeeecccCCC
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRPGA 448 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg--~~~~~~~~~W~C~~C~~~~ 448 (860)
...|.||+..+ .||.||.|...+|+.|+. +..+|.+ .|+|..|....
T Consensus 12 ~~~C~vC~~~~-----~ll~Cd~C~~~~H~~Cl~P~l~~~P~g-~W~C~~C~~~~ 60 (66)
T 2lri_C 12 GARCGVCGDGT-----DVLRCTHCAAAFHWRCHFPAGTSRPGT-GLRCRSCSGDV 60 (66)
T ss_dssp TCCCTTTSCCT-----TCEECSSSCCEECHHHHCTTTCCCCSS-SCCCTTTTTCC
T ss_pred CCCcCCCCCCC-----eEEECCCCCCceecccCCCccCcCCCC-CEECccccCCC
Confidence 46899998542 389999999999999996 4456666 89999998643
No 52
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.00 E-value=3.8e-06 Score=70.92 Aligned_cols=48 Identities=29% Similarity=0.684 Sum_probs=39.3
Q ss_pred CccccccCCcccCCCeeEEccccCceecccccc--ccccCCCCceeeecccC
Q 002995 397 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 397 ~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg--~~~~~~~~~W~C~~C~~ 446 (860)
..|.||+..++ .+.||.||.|..++|+.|++ +..+|.+..|+|..|..
T Consensus 27 c~C~vC~~~~~--~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 27 CSCRVCGGKHE--PNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSCSSSCCCCC--STTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCcCcCCcCC--CCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 48999987653 35599999999999999999 55566665899999974
No 53
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=97.99 E-value=3.6e-06 Score=69.77 Aligned_cols=47 Identities=28% Similarity=0.665 Sum_probs=38.5
Q ss_pred ccccccCCcccCCCeeEEccccCceecccccc--ccccCCCCceeeecccC
Q 002995 398 KCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 398 ~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg--~~~~~~~~~W~C~~C~~ 446 (860)
.|.||+..++ .+.||.||.|...+|+.|++ +..+|.|..|+|..|..
T Consensus 20 ~C~~C~~~~~--~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQD--PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCSC--GGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCcCC--CCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 6788887543 34699999999999999999 55667666899999975
No 54
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=97.97 E-value=3.1e-06 Score=68.06 Aligned_cols=46 Identities=33% Similarity=0.812 Sum_probs=38.3
Q ss_pred CCCccccccCCcccCCCeeEEccccCceecccccc--ccccCCCCceeeecccC
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg--~~~~~~~~~W~C~~C~~ 446 (860)
++..|.||... +.||.||.|...+|..|++ +..+|.+ .|+|..|..
T Consensus 4 ~~~~C~vC~~~-----g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g-~W~C~~C~~ 51 (60)
T 2puy_A 4 HEDFCSVCRKS-----GQLLMCDTCSRVYHLDCLDPPLKTIPKG-MWICPRCQD 51 (60)
T ss_dssp CCSSCTTTCCC-----SSCEECSSSSCEECGGGSSSCCSSCCCS-CCCCHHHHH
T ss_pred CCCCCcCCCCC-----CcEEEcCCCCcCEECCcCCCCcCCCCCC-ceEChhccC
Confidence 45799999875 3499999999999999999 4556665 899999975
No 55
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=97.96 E-value=5.4e-06 Score=71.30 Aligned_cols=48 Identities=23% Similarity=0.619 Sum_probs=40.1
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceeccccc--cccccCCCCceeeecccCC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCY--GELEPVNGVLWLCNLCRPG 447 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CY--g~~~~~~~~~W~C~~C~~~ 447 (860)
.++..|.||+..+ .||.||.|..++|..|+ ++..+|.+ .|+|..|...
T Consensus 23 ~n~~~C~vC~~~g-----~LL~CD~C~~~fH~~Cl~PpL~~~P~g-~W~C~~C~~~ 72 (88)
T 1fp0_A 23 DSATICRVCQKPG-----DLVMCNQCEFCFHLDCHLPALQDVPGE-EWSCSLCHVL 72 (88)
T ss_dssp SSSSCCSSSCSSS-----CCEECTTSSCEECTTSSSTTCCCCCSS-SCCCCSCCCC
T ss_pred CCCCcCcCcCCCC-----CEEECCCCCCceecccCCCCCCCCcCC-CcCCccccCC
Confidence 4567999999764 39999999999999999 56666776 8999999863
No 56
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=97.93 E-value=4.5e-06 Score=67.33 Aligned_cols=47 Identities=28% Similarity=0.707 Sum_probs=38.6
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceecccccccc--ccCCCCceeeecccC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGEL--EPVNGVLWLCNLCRP 446 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~--~~~~~~~W~C~~C~~ 446 (860)
..+..|.||... +.||.||.|...+|..|++.. .+|.+ .|+|..|..
T Consensus 9 ~~~~~C~vC~~~-----g~ll~CD~C~~~fH~~Cl~p~l~~~p~g-~W~C~~C~~ 57 (61)
T 2l5u_A 9 DHQDYCEVCQQG-----GEIILCDTCPRAYHMVCLDPDMEKAPEG-KWSCPHCEK 57 (61)
T ss_dssp CCCSSCTTTSCC-----SSEEECSSSSCEEEHHHHCTTCCSCCCS-SCCCTTGGG
T ss_pred CCCCCCccCCCC-----CcEEECCCCChhhhhhccCCCCCCCCCC-ceECccccc
Confidence 445799999874 349999999999999999963 45655 899999975
No 57
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=97.90 E-value=5.3e-06 Score=69.94 Aligned_cols=47 Identities=28% Similarity=0.665 Sum_probs=37.9
Q ss_pred ccccccCCcccCCCeeEEccccCceecccccc--ccccCCCCceeeecccC
Q 002995 398 KCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 398 ~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg--~~~~~~~~~W~C~~C~~ 446 (860)
.|.||...++ .+.||.||.|..++|+.|++ +..+|.+..|+|..|+.
T Consensus 28 ~C~vC~~~~d--~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQD--PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSC--GGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCC--CcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 6888887653 35699999999999999999 55677774499999975
No 58
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=97.73 E-value=2.8e-05 Score=64.51 Aligned_cols=50 Identities=26% Similarity=0.695 Sum_probs=40.0
Q ss_pred cCCCccccccCCcccCCCeeEEccc--cC-ceeccccccccccCCCCceeeecccCCC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDK--CR-MMVHARCYGELEPVNGVLWLCNLCRPGA 448 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~--C~-~~vH~~CYg~~~~~~~~~W~C~~C~~~~ 448 (860)
.+...| +|..... ..||.||+ |. .-+|..|+|+...+.+ .|+|+.|....
T Consensus 14 ~~~~~C-~C~~~~~---g~MI~CD~~~C~~~wfH~~Cvgl~~~p~g-~w~Cp~C~~~~ 66 (71)
T 1wen_A 14 NEPTYC-LCHQVSY---GEMIGCDNPDCSIEWFHFACVGLTTKPRG-KWFCPRCSQES 66 (71)
T ss_dssp TSCCCS-TTCCCSC---SSEECCSCSSCSCCCEETTTTTCSSCCSS-CCCCTTTSSCS
T ss_pred CCCCEE-ECCCCCC---CCEeEeeCCCCCCccEecccCCcCcCCCC-CEECCCCCccc
Confidence 455678 8988643 35999999 77 5899999998887776 89999998653
No 59
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=97.66 E-value=3.1e-05 Score=68.68 Aligned_cols=49 Identities=27% Similarity=0.761 Sum_probs=37.4
Q ss_pred CCccccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccCC
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 447 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~~ 447 (860)
..+| ||+...+ +..||.|+.|...+|..|+|+........|+|..|+..
T Consensus 28 ~vrC-iC~~~~~--~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~~ 76 (98)
T 2lv9_A 28 VTRC-ICGFTHD--DGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQPR 76 (98)
T ss_dssp BCCC-TTSCCSC--SSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSSS
T ss_pred CEEe-ECCCccC--CCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcCC
Confidence 3567 8987654 34699999999999999999754322237999999753
No 60
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=97.54 E-value=2.5e-05 Score=62.32 Aligned_cols=48 Identities=25% Similarity=0.663 Sum_probs=38.0
Q ss_pred cCCCccccccCCcccCCCeeEEccc--cC-ceeccccccccccCCCCceeeecccC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDK--CR-MMVHARCYGELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~--C~-~~vH~~CYg~~~~~~~~~W~C~~C~~ 446 (860)
.+...| +|+.... ..||.||+ |. --+|..|.|+...+.+ .|+|+.|..
T Consensus 7 ~e~~yC-~C~~~~~---g~mi~CD~~~C~~~wfH~~Cvgl~~~p~~-~w~Cp~C~~ 57 (59)
T 3c6w_A 7 NEPTYC-LCHQVSY---GEMIGCDNPDCPIEWFHFACVDLTTKPKG-KWFCPRCVQ 57 (59)
T ss_dssp -CCEET-TTTEECC---SEEEECSCTTCSSCEEETGGGTCSSCCSS-CCCCHHHHC
T ss_pred CCCcEE-ECCCCCC---CCeeEeeCCCCCCCCEecccCCcccCCCC-CEECcCccC
Confidence 344567 9987542 46999999 77 5999999999888776 899999974
No 61
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=97.53 E-value=2.5e-05 Score=62.67 Aligned_cols=47 Identities=28% Similarity=0.731 Sum_probs=37.5
Q ss_pred CCCccccccCCcccCCCeeEEccc--cC-ceeccccccccccCCCCceeeecccC
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDK--CR-MMVHARCYGELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~--C~-~~vH~~CYg~~~~~~~~~W~C~~C~~ 446 (860)
+...| ||+.... ..||.||+ |. ..+|..|+|+...|.+ .|+|+.|..
T Consensus 9 e~~~C-~C~~~~~---g~mi~CD~cdC~~~wfH~~Cvgl~~~p~g-~w~C~~C~~ 58 (60)
T 2vnf_A 9 EPTYC-LCHQVSY---GEMIGCDNPDCSIEWFHFACVGLTTKPRG-KWFCPRCSQ 58 (60)
T ss_dssp CCEET-TTTEECC---SEEEECSCTTCSSCEEETGGGTCSSCCSS-CCCCHHHHC
T ss_pred CCCEE-ECCCcCC---CCEEEeCCCCCCCceEehhcCCCCcCCCC-CEECcCccC
Confidence 34566 9987532 46999999 55 6899999998888776 899999974
No 62
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=97.52 E-value=2.8e-05 Score=65.47 Aligned_cols=51 Identities=22% Similarity=0.623 Sum_probs=39.7
Q ss_pred CCCccccccCCcccCCCeeEEccccCceeccccccccccCC-CCceeeecccCC
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVN-GVLWLCNLCRPG 447 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~-~~~W~C~~C~~~ 447 (860)
+...|.||....+ ...||.||.|...+|..|.|+...+. ...|+|..|...
T Consensus 17 ~~~~C~~C~~~~~--~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~ 68 (75)
T 2k16_A 17 QIWICPGCNKPDD--GSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANK 68 (75)
T ss_dssp EEECBTTTTBCCS--SCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHH
T ss_pred CCcCCCCCCCCCC--CCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCc
Confidence 3458999987653 34699999999999999999765432 248999999753
No 63
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=97.46 E-value=5.4e-05 Score=76.58 Aligned_cols=48 Identities=27% Similarity=0.629 Sum_probs=35.9
Q ss_pred CccccccCCcccCCCeeEEccccCceecccccc--ccccCCCCceeeecccC
Q 002995 397 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 397 ~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg--~~~~~~~~~W~C~~C~~ 446 (860)
..|.+|+..++ .+.||.||.|..++|..|++ +..+|.|..|+|..|..
T Consensus 175 c~C~vC~~~~~--~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 175 CACHLCGGRQD--PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TSCSSSCCCCC----CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCcCCCCCCC--CCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 48999987654 34599999999999999998 45566655899999974
No 64
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.46 E-value=8.7e-05 Score=64.38 Aligned_cols=50 Identities=26% Similarity=0.695 Sum_probs=39.5
Q ss_pred cCCCccccccCCcccCCCeeEEccc--cC-ceeccccccccccCCCCceeeecccCCC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDK--CR-MMVHARCYGELEPVNGVLWLCNLCRPGA 448 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~--C~-~~vH~~CYg~~~~~~~~~W~C~~C~~~~ 448 (860)
.+...| +|..... ..||.||+ |. .-+|..|.|+...+.+ .|+|..|....
T Consensus 34 ~e~~yC-iC~~~~~---g~MI~CD~~dC~~~WfH~~CVgl~~~p~g-~W~Cp~C~~~~ 86 (91)
T 1weu_A 34 NEPTYC-LCHQVSY---GEMIGCDNPDCSIEWFHFACVGLTTKPRG-KWFCPRCSQES 86 (91)
T ss_dssp CCCBCS-TTCCBCC---SCCCCCSCSSCSCCCCCSTTTTCSSCCCS-SCCCTTTCCCC
T ss_pred CCCcEE-ECCCCCC---CCEeEecCCCCCCCCEecccCCcCcCCCC-CEECcCccCcC
Confidence 445677 9988643 35999999 66 5799999998887776 89999998643
No 65
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=97.43 E-value=4.2e-05 Score=61.69 Aligned_cols=48 Identities=23% Similarity=0.551 Sum_probs=38.0
Q ss_pred CCCccccccCCcccCCCeeEEccccC---ceeccccccccccCCCCceeeecccCC
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCR---MMVHARCYGELEPVNGVLWLCNLCRPG 447 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~---~~vH~~CYg~~~~~~~~~W~C~~C~~~ 447 (860)
+...| +|+.... ..||.||+|+ .-+|..|.|+...+.+ .|+|+.|...
T Consensus 10 e~~yC-~C~~~~~---g~MI~CD~c~C~~~WfH~~Cvgl~~~p~~-~w~Cp~C~~~ 60 (62)
T 2g6q_A 10 EPTYC-LCNQVSY---GEMIGCDNEQCPIEWFHFSCVSLTYKPKG-KWYCPKCRGD 60 (62)
T ss_dssp CCEET-TTTEECC---SEEEECSCTTCSSCEEETGGGTCSSCCSS-CCCCHHHHTC
T ss_pred CCcEE-ECCCCCC---CCeeeeeCCCCCcccEecccCCcCcCCCC-CEECcCcccC
Confidence 44567 9987532 3699999944 8999999998887766 9999999753
No 66
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=97.41 E-value=8.3e-05 Score=75.51 Aligned_cols=49 Identities=33% Similarity=0.767 Sum_probs=39.5
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceecccccc--ccccCCCCceeeecccCCC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRPGA 448 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg--~~~~~~~~~W~C~~C~~~~ 448 (860)
..++.|.||..+++ ||.||+|..++|..|++ +..+|.| .|+|..|....
T Consensus 5 ~~~~~C~~C~~~g~-----ll~Cd~C~~~~H~~Cl~p~l~~~p~~-~W~C~~C~~~~ 55 (207)
T 3u5n_A 5 PNEDWCAVCQNGGD-----LLCCEKCPKVFHLTCHVPTLLSFPSG-DWICTFCRDIG 55 (207)
T ss_dssp SSCSSBTTTCCCEE-----EEECSSSSCEECTTTSSSCCSSCCSS-CCCCTTTSCSS
T ss_pred CCCCCCCCCCCCCc-----eEEcCCCCCccCCccCCCCCCCCCCC-CEEeCceeCcc
Confidence 34578999986642 99999999999999995 4456666 89999998643
No 67
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=97.40 E-value=8.1e-05 Score=74.19 Aligned_cols=48 Identities=31% Similarity=0.731 Sum_probs=38.7
Q ss_pred CCCccccccCCcccCCCeeEEccccCceecccccc--ccccCCCCceeeecccCCC
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRPGA 448 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg--~~~~~~~~~W~C~~C~~~~ 448 (860)
+++.|.||..++ .||.||+|..++|..|++ ....|.+ .|+|..|+...
T Consensus 3 ~~~~C~~C~~~g-----~ll~Cd~C~~~~H~~C~~p~l~~~p~~-~W~C~~C~~~~ 52 (184)
T 3o36_A 3 NEDWCAVCQNGG-----ELLCCEKCPKVFHLSCHVPTLTNFPSG-EWICTFCRDLS 52 (184)
T ss_dssp SCSSCTTTCCCS-----SCEECSSSSCEECTTTSSSCCSSCCSS-CCCCTTTSCSS
T ss_pred CCCccccCCCCC-----eeeecCCCCcccCccccCCCCCCCCCC-CEECccccCcc
Confidence 457899998653 289999999999999995 4455666 89999998743
No 68
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=97.36 E-value=7.3e-05 Score=68.31 Aligned_cols=47 Identities=34% Similarity=0.849 Sum_probs=38.2
Q ss_pred CccccccCCcccCCCeeEEccccCceecccccc--ccccCCCCceeeecccC
Q 002995 397 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 397 ~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg--~~~~~~~~~W~C~~C~~ 446 (860)
..|.||+..+. .+.||.||.|..++|+.|++ +..+|.+ .|+|..|..
T Consensus 59 ~~C~~C~~~~~--~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g-~W~C~~C~~ 107 (114)
T 2kwj_A 59 KSCILCGTSEN--DDQLLFCDDCDRGYHMYCLNPPVAEPPEG-SWSCHLCWE 107 (114)
T ss_dssp CCCTTTTCCTT--TTTEEECSSSCCEEETTTSSSCCSSCCSS-CCCCHHHHH
T ss_pred CccCcccccCC--CCceEEcCCCCccccccccCCCccCCCCC-CeECccccc
Confidence 37889987543 35699999999999999999 5566766 899999964
No 69
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=97.35 E-value=7e-05 Score=64.84 Aligned_cols=48 Identities=23% Similarity=0.576 Sum_probs=38.2
Q ss_pred cCCCccccccCCcccCCCeeEEccccC---ceeccccccccccCCCCceeeec-ccC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCR---MMVHARCYGELEPVNGVLWLCNL-CRP 446 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~---~~vH~~CYg~~~~~~~~~W~C~~-C~~ 446 (860)
.+...| ||..... ..||.||+|+ .-+|..|.|+...+.+ .|+|+. |..
T Consensus 24 ~~~~yC-iC~~~~~---g~MI~CD~c~C~~eWfH~~CVgl~~~p~~-~W~Cp~cC~~ 75 (90)
T 2jmi_A 24 QEEVYC-FCRNVSY---GPMVACDNPACPFEWFHYGCVGLKQAPKG-KWYCSKDCKE 75 (90)
T ss_dssp CCSCCS-TTTCCCS---SSEECCCSSSCSCSCEETTTSSCSSCTTS-CCCSSHHHHH
T ss_pred CCCcEE-EeCCCCC---CCEEEecCCCCccccCcCccCCCCcCCCC-CccCChhhcc
Confidence 344577 9987543 2499999977 7899999999887776 899999 974
No 70
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=97.29 E-value=0.00015 Score=59.62 Aligned_cols=50 Identities=20% Similarity=0.567 Sum_probs=39.3
Q ss_pred CCCccccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccCC
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 447 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~~ 447 (860)
+...| ||+.... +..+|.|+.|..=+|..|.|+........|+|..|..+
T Consensus 18 ~~~~C-iC~~~~~--~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~s 67 (68)
T 3o70_A 18 GLVTC-FCMKPFA--GRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDS 67 (68)
T ss_dssp TCCCS-TTCCCCT--TCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHTC
T ss_pred CceEe-ECCCcCC--CCCEEECCCCCccccccccCcCcccCCCcEECCCCCCC
Confidence 44678 9987654 45699999999999999999876432348999999753
No 71
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=97.22 E-value=0.0001 Score=73.63 Aligned_cols=46 Identities=24% Similarity=0.603 Sum_probs=38.0
Q ss_pred CCccccccCCcccCCCeeEEccccCceecccccc--ccccCCCCceeeecccCC
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRPG 447 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg--~~~~~~~~~W~C~~C~~~ 447 (860)
++.|.||+.++ .||.||+|..++|..|.. +..+|.| .|+|..|...
T Consensus 2 ~~~C~~C~~~g-----~ll~Cd~C~~~~H~~Cl~p~l~~~p~g-~W~C~~C~~~ 49 (189)
T 2ro1_A 2 ATICRVCQKPG-----DLVMCNQCEFCFHLDCHLPALQDVPGE-EWSCSLCHVL 49 (189)
T ss_dssp CCCBTTTCCCS-----SCCCCTTTCCBCCSTTSTTCCSSCCCT-TCCTTTTSCS
T ss_pred CCcCccCCCCC-----ceeECCCCCchhccccCCCCcccCCCC-CCCCcCccCC
Confidence 46899999654 288999999999999994 5556666 8999999864
No 72
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=97.21 E-value=0.00019 Score=65.40 Aligned_cols=48 Identities=31% Similarity=0.858 Sum_probs=38.0
Q ss_pred CccccccCCcccCCCeeEEccccCceecccccc--ccccCCCCceeeecccC
Q 002995 397 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 397 ~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg--~~~~~~~~~W~C~~C~~ 446 (860)
..|.||+..+. +.+.||.|+.|..++|..|+. +..+|.+ .|+|..|+.
T Consensus 62 ~~C~vC~~~~~-~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~-~W~C~~C~~ 111 (112)
T 3v43_A 62 KTCSSCRDQGK-NADNMLFCDSCDRGFHMECCDPPLTRMPKG-MWICQICRP 111 (112)
T ss_dssp CCBTTTCCCCC-TTCCCEECTTTCCEECGGGCSSCCSSCCSS-CCCCTTTSC
T ss_pred CccccccCcCC-CccceEEcCCCCCeeecccCCCCCCCCCCC-CeECCCCCC
Confidence 37899986532 335699999999999999995 5566776 899999973
No 73
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=97.16 E-value=0.0002 Score=65.05 Aligned_cols=46 Identities=28% Similarity=0.629 Sum_probs=37.4
Q ss_pred ccccccCCcccCCCeeEEccccCceecccccc--ccccCCCCceeeecccC
Q 002995 398 KCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG--ELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 398 ~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg--~~~~~~~~~W~C~~C~~ 446 (860)
.|.||...++ .+.||.|+.|...+|..|+. ...+|.+ .|+|..|..
T Consensus 56 ~C~~C~~~~~--~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g-~W~C~~C~~ 103 (111)
T 2ysm_A 56 VCQNCKQSGE--DSKMLVCDTCDKGYHTFCLQPVMKSVPTN-GWKCKNCRI 103 (111)
T ss_dssp CCTTTCCCSC--CTTEEECSSSCCEEEGGGSSSCCSSCCSS-CCCCHHHHC
T ss_pred cccccCccCC--CCCeeECCCCCcHHhHHhcCCccccCCCC-CcCCcCCcC
Confidence 6888887654 35699999999999999998 4445665 899999975
No 74
>3pmi_A PWWP domain-containing protein MUM1; structural genomics consortium, SGC, protein binding, nucLeu; HET: UNL; 2.82A {Homo sapiens}
Probab=97.12 E-value=0.00018 Score=64.38 Aligned_cols=66 Identities=18% Similarity=0.327 Sum_probs=47.5
Q ss_pred CCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCC----E-EEEeCCCcccccccccccccc
Q 002995 80 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHD----F-ARINVKQVISFLKGLLSSFHL 154 (860)
Q Consensus 80 ~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~----~-awv~~~~l~~f~~~~~~~~~~ 154 (860)
..|+.|-|||.|+.-||.|||.|-+.. ++.+...|-|...+- . --|+.++|+||.-+...++..
T Consensus 3 ~~~e~GmlVW~K~q~yPfWPAVVKSV~-----------r~ekkA~VL~Ie~~m~~ekrGi~V~LrrLK~fDC~ek~~L~~ 71 (134)
T 3pmi_A 3 RSFEVGMLVWHKHKKYPFWPAVVKSVR-----------QRDKKASVLYIEGHMNPKMKGFTVSLKSLKHFDCKEKQTLLN 71 (134)
T ss_dssp -CCCTTCEEEECCTTSCCEEEEEEEEE-----------GGGTEEEEEECCSSCCTTSCCEEEEGGGCEETTSTTHHHHHH
T ss_pred cccccceEEEEEeccCCCcchheeeee-----------eccceEEEEEEeCCCCcccCceEeEcccCCCCChHhHHHHHH
Confidence 458899999999999999999996521 223346788886543 2 479999999998543555554
Q ss_pred cC
Q 002995 155 KC 156 (860)
Q Consensus 155 k~ 156 (860)
+.
T Consensus 72 rA 73 (134)
T 3pmi_A 72 QA 73 (134)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 75
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=96.68 E-value=0.00075 Score=55.49 Aligned_cols=48 Identities=23% Similarity=0.646 Sum_probs=35.7
Q ss_pred CCccccccCCcccCCCeeEEcc--ccCceeccccccccccCCC-----CceeeecccC
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCD--KCRMMVHARCYGELEPVNG-----VLWLCNLCRP 446 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~--~C~~~vH~~CYg~~~~~~~-----~~W~C~~C~~ 446 (860)
...| ||+...+. ..||.|+ +|..=+|..|+|+...+.. ..|+|..|+.
T Consensus 10 ~v~C-~C~~~~~~--g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 10 KVRC-ICSSTMVN--DSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp EECC-TTCCCSCC--SCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred CEEe-ECCCCcCC--CCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 3567 89875443 4599999 4999999999998654322 2699999974
No 76
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.61 E-value=0.00097 Score=56.42 Aligned_cols=51 Identities=24% Similarity=0.556 Sum_probs=39.5
Q ss_pred CCCccccccCCcccCCCeeEEcc--ccCceeccccccccccCC------CCceeeecccCCC
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCD--KCRMMVHARCYGELEPVN------GVLWLCNLCRPGA 448 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~--~C~~~vH~~CYg~~~~~~------~~~W~C~~C~~~~ 448 (860)
+...| ||+...+ +..||.|+ .|..=+|..|+|+...+. ...|+|..|+...
T Consensus 15 ~~~~C-iC~~~~~--~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 15 IKVRC-VCGNSLE--TDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CCCCC-SSCCCCC--CSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred CCEEe-ECCCcCC--CCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCccc
Confidence 34678 8998743 34699999 999999999999876432 2489999998643
No 77
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.58 E-value=0.0015 Score=52.95 Aligned_cols=53 Identities=19% Similarity=0.508 Sum_probs=40.7
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceeccccccccccC--CCCceeeecccCC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPV--NGVLWLCNLCRPG 447 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~--~~~~W~C~~C~~~ 447 (860)
.+...|.+|....+ ++..+|+|+.|..=+|..|.|+...+ ....|+|..|...
T Consensus 4 ~e~~~C~~C~~~~~-~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 4 GSSGQCGACGESYA-ADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SSCCCCSSSCCCCC-SSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCCccC-CCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 34578999987643 23569999999999999999986542 1248999999753
No 78
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=96.49 E-value=0.0013 Score=50.87 Aligned_cols=45 Identities=18% Similarity=0.532 Sum_probs=35.5
Q ss_pred ccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccC
Q 002995 400 SVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 400 ~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~ 446 (860)
.+|+.... +..+|.|++|..=+|..|.|+...+....|+|+.|+.
T Consensus 7 C~C~~~~~--~~~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 7 CFCMKPFA--GRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp STTCCBCT--TCCEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred EEeCCcCC--CCCEEEcCCCCccccccccCCCcccCCCcEECcCCCC
Confidence 47987543 4579999999999999999987643334899999974
No 79
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.44 E-value=0.00079 Score=55.60 Aligned_cols=47 Identities=26% Similarity=0.615 Sum_probs=37.1
Q ss_pred CCCccccccCCcccCCCeeEEccccC---ceeccccccccccCCCCceeeecccC
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCR---MMVHARCYGELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~---~~vH~~CYg~~~~~~~~~W~C~~C~~ 446 (860)
+...| +|..... ..||.||+|+ .-+|..|.|+...+.+ .|+|+.|..
T Consensus 5 ~~~yC-~C~~~~~---g~MI~CD~cdC~~~WfH~~Cvgl~~~p~~-~w~Cp~C~~ 54 (70)
T 1x4i_A 5 SSGYC-ICNQVSY---GEMVGCDNQDCPIEWFHYGCVGLTEAPKG-KWYCPQCTA 54 (70)
T ss_dssp CCCCS-TTSCCCC---SSEECCSCTTCSCCCEEHHHHTCSSCCSS-CCCCHHHHH
T ss_pred CCeEE-EcCCCCC---CCEeEeCCCCCCccCCcccccccCcCCCC-CEECCCCCc
Confidence 33566 6987642 2699999985 7899999999887765 899999974
No 80
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=96.26 E-value=0.0024 Score=72.58 Aligned_cols=44 Identities=18% Similarity=0.248 Sum_probs=36.1
Q ss_pred CccccCCCCCCCCeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCCC
Q 002995 769 SIAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFF 816 (860)
Q Consensus 769 n~aRfiNHSC~PN~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~~ 816 (860)
.++=++||+|.||+.+.. + ...+.++|.|+|++||||+++||..
T Consensus 221 P~~D~~NH~~~~~~~~~~---~-~~~~~~~a~~~i~~Geei~~~YG~~ 264 (449)
T 3qxy_A 221 PAADILNHLANHNANLEY---S-ANCLRMVATQPIPKGHEIFNTYGQM 264 (449)
T ss_dssp TTGGGCEECSSCSEEEEE---C-SSEEEEEESSCBCTTCEEEECCSSC
T ss_pred ecHHHhcCCCCCCeEEEE---e-CCeEEEEECCCcCCCchhhccCCCC
Confidence 456689999999986543 2 3478999999999999999999863
No 81
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.11 E-value=0.0035 Score=52.10 Aligned_cols=50 Identities=26% Similarity=0.567 Sum_probs=37.5
Q ss_pred CCccccccCCcccCCCeeEEccccCceecccccccccc-CCCCceeeecccCC
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEP-VNGVLWLCNLCRPG 447 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~-~~~~~W~C~~C~~~ 447 (860)
...| +|+...+ +...+|.|+.|..=+|..|.|+... .....|+|..|...
T Consensus 16 ~~~C-~C~~~~~-~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 16 KVDC-KCGTKDD-DGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp EECC-TTCCCSC-CSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred ceEe-eCCCccC-CCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCC
Confidence 3578 7987642 2335999999999999999998642 12348999999753
No 82
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=95.91 E-value=0.0029 Score=53.57 Aligned_cols=50 Identities=22% Similarity=0.526 Sum_probs=38.2
Q ss_pred CCccccccCCcccCCCeeEEccccCceeccccccccccC--CCCceeeecccCC
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPV--NGVLWLCNLCRPG 447 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~--~~~~W~C~~C~~~ 447 (860)
...| +|....+ ++..+|+|+.|..=+|..|.|+...+ ....|+|..|...
T Consensus 12 ~~~C-~C~~~~d-~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 63 (79)
T 1wep_A 12 PVYC-LCRQPYN-VNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAV 63 (79)
T ss_dssp CCCS-TTSCSCC-SSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTT
T ss_pred ccEE-EcCCccC-CCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccc
Confidence 3466 9988653 24569999999999999999986532 1248999999864
No 83
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=95.86 E-value=0.002 Score=52.26 Aligned_cols=49 Identities=22% Similarity=0.691 Sum_probs=37.8
Q ss_pred CCCccccccCCcccCCCeeEEcc-ccCceecccccccccc--------CCCCceeeeccc
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCD-KCRMMVHARCYGELEP--------VNGVLWLCNLCR 445 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~-~C~~~vH~~CYg~~~~--------~~~~~W~C~~C~ 445 (860)
....|.+|..... ++..+|.|| .|..-+|..|.|+... +. ..|+|+.|.
T Consensus 7 ~~~~C~~C~~p~~-~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~-~~w~C~~C~ 64 (65)
T 2vpb_A 7 PVYPCGICTNEVN-DDQDAILCEASCQKWFHRICTGMTETAYGLLTAEAS-AVWGCDTCM 64 (65)
T ss_dssp --CBCTTTCSBCC-TTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTT-EEECCHHHH
T ss_pred CcCcCccCCCccC-CCCCeEecccCccccCchhccCCCHHHHHHhhccCC-CcEECcCcc
Confidence 3468999998643 345699999 9999999999997642 33 389999996
No 84
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=95.84 E-value=0.003 Score=53.12 Aligned_cols=49 Identities=29% Similarity=0.671 Sum_probs=37.9
Q ss_pred CCccccccCCcccCCCeeEEccccCceeccccccccccC------CCCceeeecccCC
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPV------NGVLWLCNLCRPG 447 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~------~~~~W~C~~C~~~ 447 (860)
...| +|+.... ...+|.|+.|..=+|..|.|+...+ ....|+|..|...
T Consensus 16 ~~~C-~C~~~~~--~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~ 70 (76)
T 1wem_A 16 ALYC-ICRQPHN--NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp CCCS-TTCCCCC--SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCEE-ECCCccC--CCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCc
Confidence 3567 8998654 3469999999999999999986532 2348999999753
No 85
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=95.76 E-value=0.0034 Score=48.59 Aligned_cols=47 Identities=21% Similarity=0.497 Sum_probs=35.6
Q ss_pred ccccccCCcccCCCeeEEcc-ccCceeccccccccccC-CCCceeeeccc
Q 002995 398 KCSVCHMDEEYQNNLFLQCD-KCRMMVHARCYGELEPV-NGVLWLCNLCR 445 (860)
Q Consensus 398 ~C~vC~~~~~~~~n~ll~C~-~C~~~vH~~CYg~~~~~-~~~~W~C~~C~ 445 (860)
.|.+|..... ++..+|.|+ .|..=+|..|.|+...+ ....|+|..|+
T Consensus 4 ~cc~C~~p~~-~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCK-DKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCC-TTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccC-CCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 5788987653 345699999 89999999999986532 12489999984
No 86
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=95.59 E-value=0.0046 Score=70.08 Aligned_cols=47 Identities=23% Similarity=0.235 Sum_probs=34.4
Q ss_pred ccccCCCCCCCCeeEEEEEEC-------CeeEEEEEEccCCCCCCeEEEecCCC
Q 002995 770 IAHLINHSCEPNCYSRVISVN-------GDEHIIIFAKRDIKQWEELTYDYRFF 816 (860)
Q Consensus 770 ~aRfiNHSC~PN~~~~~~~~~-------~~~~i~i~A~RdI~~GEELt~dY~~~ 816 (860)
++=++||++.||.....+.+. +...+.++|.|+|++||||+++||..
T Consensus 189 ~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Geei~~sYG~~ 242 (440)
T 2h21_A 189 MADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDLN 242 (440)
T ss_dssp STTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTSBCEECSCTT
T ss_pred chHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCCEEEEeCCCC
Confidence 455789999997432222322 24679999999999999999999864
No 87
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=95.51 E-value=0.014 Score=49.42 Aligned_cols=57 Identities=18% Similarity=0.271 Sum_probs=45.4
Q ss_pred CCCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCccccccc
Q 002995 78 DCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKG 147 (860)
Q Consensus 78 ~~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~ 147 (860)
....|.+||.|.||-..--|-||+|.... +.+.|.|.|++ ...-=|...+|+|+.++
T Consensus 18 ~~~~f~vGd~VlArW~D~~yYPAkI~sV~------------~~~~YtV~F~D-G~~etvk~~~IKp~~~~ 74 (85)
T 3qii_A 18 GSSEFQINEQVLACWSDCRFYPAKVTAVN------------KDGTYTVKFYD-GVVQTVKHIHVKAFSKD 74 (85)
T ss_dssp ---CCCTTCEEEEECTTSCEEEEEEEEEC------------TTSEEEEEETT-SCEEEEEGGGEEECC--
T ss_pred CCcccccCCEEEEEeCCCCEeeEEEEEEC------------CCCeEEEEEeC-CCeEEecHHHcccCChh
Confidence 35689999999999999999999997531 22469999998 88899999999999874
No 88
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=95.30 E-value=0.006 Score=54.58 Aligned_cols=49 Identities=24% Similarity=0.708 Sum_probs=38.7
Q ss_pred CccccccCCcccCCCeeEEcc-ccCceeccccccccc--------cCCCCceeeecccCC
Q 002995 397 DKCSVCHMDEEYQNNLFLQCD-KCRMMVHARCYGELE--------PVNGVLWLCNLCRPG 447 (860)
Q Consensus 397 ~~C~vC~~~~~~~~n~ll~C~-~C~~~vH~~CYg~~~--------~~~~~~W~C~~C~~~ 447 (860)
..|.+|...... +..+|+|+ .|..=||..|.|+.. .++ ..|+|+.|...
T Consensus 4 ~~C~iC~~p~~~-~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~-~~~~Cp~C~~~ 61 (105)
T 2xb1_A 4 YPCGACRSEVND-DQDAILCEASCQKWFHRECTGMTESAYGLLTTEAS-AVWACDLCLKT 61 (105)
T ss_dssp CBCTTTCSBCCT-TSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTT-EEECCHHHHHT
T ss_pred CCCCCCCCccCC-CCCEEEecCCcccccccccCCcCHHHHHhhccCCC-CCEECccccCc
Confidence 479999987432 34599998 999999999999764 233 48999999864
No 89
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=95.15 E-value=0.0029 Score=62.22 Aligned_cols=50 Identities=26% Similarity=0.721 Sum_probs=38.2
Q ss_pred CCCccccccCCcccCCCeeEEccccCceeccccccccccC--CCCceeeecccC
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPV--NGVLWLCNLCRP 446 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~--~~~~W~C~~C~~ 446 (860)
+...| +|+...+ +...+|.|+.|..-+|..|.|+...+ ....|+|..|..
T Consensus 7 ~~~~C-~C~~~~~-~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~ 58 (174)
T 2ri7_A 7 TKLYC-ICKTPED-ESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQS 58 (174)
T ss_dssp CCEET-TTTEECC-TTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHH
T ss_pred CCcEe-eCCCCCC-CCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcc
Confidence 44688 9987643 23459999999999999999975432 234899999985
No 90
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=95.05 E-value=0.0084 Score=56.31 Aligned_cols=46 Identities=24% Similarity=0.639 Sum_probs=37.1
Q ss_pred CCCccccccCCcccCCCeeEEccccCceeccccccccc---------cCCCCceeeecccC
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELE---------PVNGVLWLCNLCRP 446 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~---------~~~~~~W~C~~C~~ 446 (860)
.++.|.||..+++ |+.||.|...+|..|..... .+.+ .|.|..|..
T Consensus 62 ~~d~C~vC~~GG~-----LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~-~W~C~~C~~ 116 (142)
T 2lbm_A 62 MDEQCRWCAEGGN-----LICCDFCHNAFCKKCILRNLGRKELSTIMDENN-QWYCYICHP 116 (142)
T ss_dssp CBCSCSSSCCCSS-----EEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTT-CCCCTTTCC
T ss_pred CCCeecccCCCCc-----EEeCCCCCCeeeHhhcCCCCChhhhhhcccCCC-CCEeecccC
Confidence 4579999997654 89999999999999997322 2444 899999975
No 91
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=95.01 E-value=0.027 Score=45.61 Aligned_cols=56 Identities=18% Similarity=0.275 Sum_probs=45.8
Q ss_pred CCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCccccccc
Q 002995 79 CQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKG 147 (860)
Q Consensus 79 ~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~ 147 (860)
...|++||.|.||-..--|-||.|.... +.+.|.|.|++ ...-=|...+|+|+.++
T Consensus 4 ~~~~~vGd~vmArW~D~~yYpA~I~si~------------~~~~Y~V~F~d-G~~etvk~~~ikp~~~~ 59 (67)
T 3p8d_A 4 SSEFQINEQVLACWSDCRFYPAKVTAVN------------KDGTYTVKFYD-GVVQTVKHIHVKAFSKD 59 (67)
T ss_dssp -CCCCTTCEEEEECTTSCEEEEEEEEEC------------TTSEEEEEETT-SCEEEEEGGGEEECC--
T ss_pred CcccccCCEEEEEcCCCCEeeEEEEEEC------------CCCeEEEEEeC-CceEEEeHHHcccCCcc
Confidence 3579999999999988899999996521 22569999998 88999999999999874
No 92
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=94.74 E-value=0.016 Score=66.58 Aligned_cols=43 Identities=16% Similarity=0.050 Sum_probs=32.9
Q ss_pred ccccCCCCCCCCeeEEEEEECCeeEEEEEEccCCCCCCeEEEecCC
Q 002995 770 IAHLINHSCEPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRF 815 (860)
Q Consensus 770 ~aRfiNHSC~PN~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY~~ 815 (860)
++=++||+|.||.. . +......+.++|.|+|++||||+++||.
T Consensus 272 ~~Dm~NH~~~~~~~--~-~~~~~~~~~~~a~~~i~~Geei~isYG~ 314 (497)
T 3smt_A 272 LWDMCNHTNGLITT--G-YNLEDDRCECVALQDFRAGEQIYIFYGT 314 (497)
T ss_dssp TGGGCEECSCSEEE--E-EETTTTEEEEEESSCBCTTCEEEECCCS
T ss_pred hHHhhcCCCcccce--e-eeccCCeEEEEeCCccCCCCEEEEeCCC
Confidence 34578999999631 1 2223457889999999999999999975
No 93
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=94.45 E-value=0.01 Score=49.72 Aligned_cols=48 Identities=23% Similarity=0.608 Sum_probs=36.5
Q ss_pred ccccccCCcccCCCeeEEccccCceeccccccccccC--CCCceeeecccC
Q 002995 398 KCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPV--NGVLWLCNLCRP 446 (860)
Q Consensus 398 ~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~--~~~~W~C~~C~~ 446 (860)
+-.||+...+ ++..+|+|+.|..=+|..|.|+...+ ....|+|..|..
T Consensus 11 ~yCiC~~~~~-~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~ 60 (75)
T 3kqi_A 11 VYCVCRLPYD-VTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEK 60 (75)
T ss_dssp EETTTTEECC-TTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHH
T ss_pred eEEECCCcCC-CCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcc
Confidence 4458986432 24569999999999999999987543 234799999975
No 94
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=93.82 E-value=0.017 Score=56.83 Aligned_cols=51 Identities=24% Similarity=0.578 Sum_probs=37.9
Q ss_pred CccccccCCcccC--CCeeEEccccCceecccccccccc--------CCCCceeeecccCC
Q 002995 397 DKCSVCHMDEEYQ--NNLFLQCDKCRMMVHARCYGELEP--------VNGVLWLCNLCRPG 447 (860)
Q Consensus 397 ~~C~vC~~~~~~~--~n~ll~C~~C~~~vH~~CYg~~~~--------~~~~~W~C~~C~~~ 447 (860)
..|.||...-..+ ...+|.||.|..=+|..|-|+... |+...|+|..|...
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~ 63 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 63 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCC
Confidence 4799998753332 235999999999999999997531 22237999999864
No 95
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=93.63 E-value=0.094 Score=48.25 Aligned_cols=98 Identities=13% Similarity=0.178 Sum_probs=58.0
Q ss_pred CceeeeeeeecCCCCceEEEecCCCccccccccceEEEEEccchhhhhhcccCCCCCCCCCCChhhHHHhhcCccCCCCC
Q 002995 3 DWYSGFVVGYDSESNRHHVKYVDGDEEDLILSNERIKFYISQEEMDCLKLSFSINNVDNDGYDYDEMVVLAASLDDCQEL 82 (860)
Q Consensus 3 ~~~~g~v~~~~~~~~~h~~~y~d~d~e~~~l~~e~i~~~~s~~e~~~l~~~~~~~~~~~~~~~~de~~~~~~~~~~~~~f 82 (860)
+||.|.|+.. ..+.=.|.|++. |.. .+.|. ... .|..+.+ .....|
T Consensus 16 ~~y~a~V~~v--~~d~~~V~f~n~---w~~--~~~vp-------~~~--vRlpP~~------------------~~~~~f 61 (128)
T 3h8z_A 16 AFYKGFVKDV--HEDSVTIFFENN---WQS--ERQIP-------FGD--VRLPPPA------------------DYNKEI 61 (128)
T ss_dssp CEEEEEEEEE--CSSEEEEEETTC---TTC--CEEEE-------GGG--EECCCCC----------------------CC
T ss_pred CEEEEEEEEE--eCCcEEEEEccc---cCc--ceEec-------hhh--EEcCCCc------------------ccccCC
Confidence 7999999987 566788999653 210 11111 111 1221111 112469
Q ss_pred CCCCEEEEEecc-----cCCCceEeeCCCCcCccccccccCCCCcEEEEEeC-CCC-EEEEeCCCccccccc
Q 002995 83 EPGDIIWAKLTG-----HAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFG-THD-FARINVKQVISFLKG 147 (860)
Q Consensus 83 ~~GdlVwaK~~g-----~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg-~~~-~awv~~~~l~~f~~~ 147 (860)
..||-|=+-.+. ..||+|+|... +...|.|.|-| +.+ --||...+|.|...+
T Consensus 62 ~~gd~VEV~~~~~d~ep~gWw~a~I~~~-------------kg~f~~V~y~~~~~~~~EiV~~~rlR~~n~~ 120 (128)
T 3h8z_A 62 TEGDEVEVYSRANEQEPCGWWLARVRMM-------------KGDFYVIEYAACDATYNEIVTLERLRPVNPN 120 (128)
T ss_dssp CTTCEEEEEECC---CCCEEEEEEEEEE-------------ETTEEEEEETTC----CEEECGGGEEECCCC
T ss_pred CCCCEEEEEecCCCCCcCccEEEEEEEe-------------eCCEEEEEEcCCCCCcceEEehhheEeCCCC
Confidence 999988776654 36999999541 12346788776 333 479999999888654
No 96
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=93.22 E-value=0.026 Score=52.05 Aligned_cols=47 Identities=21% Similarity=0.620 Sum_probs=35.9
Q ss_pred CCCccccccCCcccCCCeeEEccccCceecccccccc-------ccC-CCCceeeecccC
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGEL-------EPV-NGVLWLCNLCRP 446 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~-------~~~-~~~~W~C~~C~~ 446 (860)
.++.|.||..+++ |+.||.|..++|..|.... ... +.+.|.|-.|..
T Consensus 56 ~~~~C~vC~dGG~-----LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 56 MDEQCRWCAEGGN-----LICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp CBSSCTTTCCCSE-----EEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCcCeecCCCCe-----eEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 3468999987643 8999999999999998632 221 234899999964
No 97
>2yrv_A AT-rich interactive domain-containing protein 4A; ARID domain-containing protein 4A, retinoblastoma-binding protein 1, RBBP-1, structural genomics; NMR {Homo sapiens}
Probab=93.19 E-value=0.12 Score=46.14 Aligned_cols=89 Identities=18% Similarity=0.191 Sum_probs=68.0
Q ss_pred CCCEEEEEec--ccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCcccccccccccccccCChHHH
Q 002995 84 PGDIIWAKLT--GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGLLSSFHLKCKKPRF 161 (860)
Q Consensus 84 ~GdlVwaK~~--g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~~~~~~~~k~k~~~~ 161 (860)
+|-+|-.... .-.|-||.|+.+...... . -++.+++|+=|-|..|+=|+.+++..|..... .+ ....+
T Consensus 13 lGkVV~V~~~~kk~~WfPALVVsPs~~d~v-~----vkKd~~LVRSFkDgKf~sV~rkdv~e~~~~~~----~k-~d~sl 82 (117)
T 2yrv_A 13 LGKVVSVVSATERTEWYPALVISPSCNDDI-T----VKKDQCLVRSFIDSKFYSIARKDIKEVDILNL----PE-SELST 82 (117)
T ss_dssp TTSEEEEECSSCSSCEEEEEEECCSSCSSC-C----CCTTCEEEEESSSCCEEEECTTTEECCCSTTS----CH-HHHHH
T ss_pred cCcEEEEecCCCCCceeeeEEECCCCCCCe-e----eccceEEEEeeccCeEEEEEhHhhhhcccccc----cc-CchhH
Confidence 6777777653 346999999998654442 1 23578999999999999999999999986411 12 23577
Q ss_pred HHHHHHHHHHHHhCCCchHHH
Q 002995 162 TQSLEEAKVYLSEQKLPRRML 182 (860)
Q Consensus 162 ~~A~~ea~~~~~~~~~~~~~~ 182 (860)
+.|++.|..+++...+|..+.
T Consensus 83 K~a~d~A~~fl~~~~lP~~W~ 103 (117)
T 2yrv_A 83 KPGLQKASIFLKTRVVPDNWK 103 (117)
T ss_dssp CHHHHHHHHHHHTCCCCTTTC
T ss_pred HHHHHHHHHHHhcCCCCCccc
Confidence 899999999999999997553
No 98
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=91.94 E-value=0.068 Score=44.96 Aligned_cols=31 Identities=39% Similarity=0.798 Sum_probs=26.8
Q ss_pred cCccceecCCc--ceeeEEcCCCCcCccccchhh
Q 002995 507 WKLLCSICGVS--YGACIQCSNTTCRVAYHPLCA 538 (860)
Q Consensus 507 ~~~~C~~C~~~--~Ga~iqC~~~~C~~~fH~~CA 538 (860)
....| +|++. .|.||||....|..|||..|.
T Consensus 15 ~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CV 47 (78)
T 1wew_A 15 IKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCV 47 (78)
T ss_dssp CCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHH
T ss_pred CCEEe-ECCCcCCCCCEEEECCccCCccccCEEE
Confidence 34567 89984 799999998899999999998
No 99
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=91.35 E-value=0.23 Score=43.72 Aligned_cols=63 Identities=11% Similarity=0.195 Sum_probs=48.2
Q ss_pred CccCCCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCE--EEEeCCCccccccc
Q 002995 75 SLDDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVISFLKG 147 (860)
Q Consensus 75 ~~~~~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~--awv~~~~l~~f~~~ 147 (860)
.......|.+|+.|++.- +=-|.+|.|++... ..+...|.|.|-|-+.+ -||+.++|..+++.
T Consensus 16 ~~~~~~~f~vGekVl~~~-~~~~YeAkIl~v~~---------~~~~~~Y~VHY~GwNkR~DEWV~~~Rl~k~t~e 80 (102)
T 2f5k_A 16 KQDPKPKFQEGERVLCFH-GPLLYEAKCVKVAI---------KDKQVKYFIHYSGWNKNWDEWVPESRVLKYVDT 80 (102)
T ss_dssp --CCSCSCCTTCEEEEES-SSSEEEEEEEEEEE---------ETTEEEEEEEETTSCGGGCEEEEGGGEEESSHH
T ss_pred CCCCCcccCCCCEEEEEE-CCEEEEEEEEEEEE---------cCCCcEEEEEeCCcCCCceeeccHhhcccCCHH
Confidence 334456799999999987 44689999987431 12345699999998874 89999999999875
No 100
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=91.31 E-value=0.056 Score=45.15 Aligned_cols=49 Identities=20% Similarity=0.622 Sum_probs=36.4
Q ss_pred CCCccccccCCcccCCCeeEEccccCceecccccccc-------------ccCCCCceeeecccC
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGEL-------------EPVNGVLWLCNLCRP 446 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~-------------~~~~~~~W~C~~C~~ 446 (860)
.++.|.||..-+ .+.++.|.-|+..+|..|..-. .-.....|.|..|.+
T Consensus 14 ~D~~C~VC~~~t---~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 14 NDEMCDVCEVWT---AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp CSCCCTTTCCCC---SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred CCcccCcccccc---ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 568999998644 3458899999999999998421 112334799999975
No 101
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=91.29 E-value=0.29 Score=39.37 Aligned_cols=58 Identities=10% Similarity=0.097 Sum_probs=45.6
Q ss_pred CCCCCCCCCEEEEEec-ccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCcccccc
Q 002995 78 DCQELEPGDIIWAKLT-GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLK 146 (860)
Q Consensus 78 ~~~~f~~GdlVwaK~~-g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~ 146 (860)
....+++||++.||.. -=-|-+|+|.... ...+.+.|.|.+-.....|+.++|+|..+
T Consensus 5 ~~~~~~vGd~c~A~~s~Dg~wYrA~I~~v~-----------~~~~~~~V~fvdYGn~e~V~~~~Lrpl~~ 63 (64)
T 4a4f_A 5 PTHSWKVGDKCMAVWSEDGQCYEAEIEEID-----------EENGTAAITFAGYGNAEVTPLLNLKPVEE 63 (64)
T ss_dssp CSSCCCTTCEEEEECTTTSSEEEEEEEEEE-----------TTTTEEEEEETTTTEEEEEEGGGEECCSC
T ss_pred cCCCCCCCCEEEEEECCCCCEEEEEEEEEc-----------CCCCEEEEEEEecCCEEEEeHHHcEeCCC
Confidence 3567999999999984 3358899997521 11246899999888899999999999876
No 102
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=90.62 E-value=0.1 Score=41.95 Aligned_cols=28 Identities=32% Similarity=0.688 Sum_probs=24.7
Q ss_pred ccceecCCc---ceeeEEcCCCCcCccccchhh
Q 002995 509 LLCSICGVS---YGACIQCSNTTCRVAYHPLCA 538 (860)
Q Consensus 509 ~~C~~C~~~---~Ga~iqC~~~~C~~~fH~~CA 538 (860)
..|.+|+++ .+.+|||. .|..|||..|.
T Consensus 7 ~~C~~C~~~~~~~~~mI~Cd--~C~~WfH~~Cv 37 (64)
T 1we9_A 7 GQCGACGESYAADEFWICCD--LCEMWFHGKCV 37 (64)
T ss_dssp CCCSSSCCCCCSSSCEEECS--SSCCEEETTTT
T ss_pred CCCCCCCCccCCCCCEEEcc--CCCCCCCcccc
Confidence 468899986 47899999 89999999998
No 103
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=90.30 E-value=0.13 Score=58.09 Aligned_cols=36 Identities=25% Similarity=0.516 Sum_probs=29.5
Q ss_pred CeeEEccccCceeccccccccccC--CCCceeeecccC
Q 002995 411 NLFLQCDKCRMMVHARCYGELEPV--NGVLWLCNLCRP 446 (860)
Q Consensus 411 n~ll~C~~C~~~vH~~CYg~~~~~--~~~~W~C~~C~~ 446 (860)
..+|.||.|.-=+|..|.|+.... .-..|+|+.|..
T Consensus 56 ~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~ 93 (528)
T 3pur_A 56 FQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVP 93 (528)
T ss_dssp TSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHH
T ss_pred CCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcC
Confidence 469999999999999999986532 124799999975
No 104
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=90.11 E-value=0.099 Score=42.68 Aligned_cols=29 Identities=34% Similarity=0.807 Sum_probs=24.3
Q ss_pred ccceecCCc--ceeeEEcCCCCcCccccchhh
Q 002995 509 LLCSICGVS--YGACIQCSNTTCRVAYHPLCA 538 (860)
Q Consensus 509 ~~C~~C~~~--~Ga~iqC~~~~C~~~fH~~CA 538 (860)
..| +|+.. .|.||+|....|..|||..|.
T Consensus 11 v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cv 41 (68)
T 2rsd_A 11 VRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCV 41 (68)
T ss_dssp ECC-TTCCCSCCSCEEECSCTTTCEEEETTTS
T ss_pred EEe-ECCCCcCCCCEEEECCCCCCCeEchhhC
Confidence 356 79763 789999986689999999996
No 105
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=89.76 E-value=0.13 Score=43.36 Aligned_cols=28 Identities=25% Similarity=0.723 Sum_probs=23.9
Q ss_pred CccceecCCc---ceeeEEcCCCCcCccccchhh
Q 002995 508 KLLCSICGVS---YGACIQCSNTTCRVAYHPLCA 538 (860)
Q Consensus 508 ~~~C~~C~~~---~Ga~iqC~~~~C~~~fH~~CA 538 (860)
...| +|++. .+.+|||. .|..|||..|.
T Consensus 12 ~~~C-~C~~~~d~~~~MIqCd--~C~~WfH~~Cv 42 (79)
T 1wep_A 12 PVYC-LCRQPYNVNHFMIECG--LCQDWFHGSCV 42 (79)
T ss_dssp CCCS-TTSCSCCSSSCEEEBT--TTCCEEEHHHH
T ss_pred ccEE-EcCCccCCCCceEEcC--CCCCcEEeeec
Confidence 3456 99986 58999999 79999999998
No 106
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=88.59 E-value=0.15 Score=42.13 Aligned_cols=30 Identities=37% Similarity=0.892 Sum_probs=24.4
Q ss_pred cCccceecCCc--ce-eeEEcCCCCcCccccchhhh
Q 002995 507 WKLLCSICGVS--YG-ACIQCSNTTCRVAYHPLCAR 539 (860)
Q Consensus 507 ~~~~C~~C~~~--~G-a~iqC~~~~C~~~fH~~CA~ 539 (860)
....| +|++. .| .+|||. .|..|||..|.-
T Consensus 15 ~~~~C-~C~~~~~~g~~mI~Cd--~C~~W~H~~Cvg 47 (72)
T 1wee_A 15 WKVDC-KCGTKDDDGERMLACD--GCGVWHHTRCIG 47 (72)
T ss_dssp SEECC-TTCCCSCCSSCEEECS--SSCEEEETTTTT
T ss_pred cceEe-eCCCccCCCCcEEECC--CCCCccCCeeec
Confidence 44578 69986 35 699999 899999999983
No 107
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=88.51 E-value=0.19 Score=40.11 Aligned_cols=30 Identities=33% Similarity=0.847 Sum_probs=24.7
Q ss_pred ccceecCCc-ceeeEEcCCCCcC-ccccchhhh
Q 002995 509 LLCSICGVS-YGACIQCSNTTCR-VAYHPLCAR 539 (860)
Q Consensus 509 ~~C~~C~~~-~Ga~iqC~~~~C~-~~fH~~CA~ 539 (860)
..| +|++. .|-+|+|....|. .+||..|.-
T Consensus 12 ~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvg 43 (62)
T 2g6q_A 12 TYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVS 43 (62)
T ss_dssp EET-TTTEECCSEEEECSCTTCSSCEEETGGGT
T ss_pred cEE-ECCCCCCCCeeeeeCCCCCcccEecccCC
Confidence 456 89983 6899999966688 999999984
No 108
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=87.41 E-value=0.74 Score=35.48 Aligned_cols=53 Identities=19% Similarity=0.294 Sum_probs=40.5
Q ss_pred CCCCCCEEEEEec-ccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCcccc
Q 002995 81 ELEPGDIIWAKLT-GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISF 144 (860)
Q Consensus 81 ~f~~GdlVwaK~~-g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f 144 (860)
.|++||++.||.. -=-|-+|+|.... ...+.+.|+|.+-....-|+.++|+|.
T Consensus 1 ~wk~G~~c~A~~s~Dg~wYrA~I~~i~-----------~~~~~~~V~fvDYGn~e~v~~~~lrpi 54 (54)
T 3s6w_A 1 MWKPGDECFALYWEDNKFYRAEVEALH-----------SSGMTAVVKFIDYGNYEEVLLSNIKPI 54 (54)
T ss_dssp CCCTTCEEEEEETTTTEEEEEEEEEC-------------CCSEEEEEETTTCCEEEEEGGGEECC
T ss_pred CCCCCCEEEEEECCCCCEEEEEEEEEe-----------CCCCEEEEEEEccCCeEEEeHHHEEEC
Confidence 3789999999984 3359999997632 112458899998888999999999874
No 109
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=87.40 E-value=0.77 Score=36.13 Aligned_cols=56 Identities=18% Similarity=0.210 Sum_probs=43.7
Q ss_pred CCCCCCCEEEEEec-ccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCcccccc
Q 002995 80 QELEPGDIIWAKLT-GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLK 146 (860)
Q Consensus 80 ~~f~~GdlVwaK~~-g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~ 146 (860)
..|++||++.||.. .=-|-+|+|.... ...+.+.|.|.+=....-|+.++|+|+..
T Consensus 2 ~~~~~G~~c~A~~s~Dg~wYrA~I~~i~-----------~~~~~~~V~f~DYGn~e~v~~~~Lr~~~~ 58 (59)
T 1mhn_A 2 QQWKVGDKCSAIWSEDGCIYPATIASID-----------FKRETCVVVYTGYGNREEQNLSDLLSPIC 58 (59)
T ss_dssp CCCCTTCEEEEECTTTSCEEEEEEEEEE-----------TTTTEEEEEETTTTEEEEEEGGGCBCTTC
T ss_pred CcCCcCCEEEEEECCCCCEEEEEEEEEc-----------CCCCEEEEEEEcCCCEEEEcHHHeeCCCC
Confidence 36899999999985 3468999997531 11356899998878889999999998753
No 110
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=87.25 E-value=0.61 Score=36.10 Aligned_cols=54 Identities=17% Similarity=0.097 Sum_probs=42.5
Q ss_pred CCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCccccc
Q 002995 80 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFL 145 (860)
Q Consensus 80 ~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~ 145 (860)
..|.+|+=|+|+-.-=-.-||.|+... .....++|+|+ |++-.|+..++|.+..
T Consensus 2 ~~f~~GedVLarwsDG~fYlGtI~~V~-----------~~~~~clV~F~-D~s~~W~~~kdi~~~~ 55 (58)
T 4hcz_A 2 PRLWEGQDVLARWTDGLLYLGTIKKVD-----------SAREVCLVQFE-DDSQFLVLWKDISPAA 55 (58)
T ss_dssp CSCCTTCEEEEECTTSCEEEEEEEEEE-----------TTTTEEEEEET-TSCEEEEEGGGEEECS
T ss_pred CccccCCEEEEEecCCCEEeEEEEEEe-----------cCCCEEEEEEc-CCCeEEEEhHHccccc
Confidence 369999999999888788899997632 12235899988 7788999999987653
No 111
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=86.90 E-value=0.81 Score=38.28 Aligned_cols=59 Identities=17% Similarity=0.219 Sum_probs=46.9
Q ss_pred CCCCCCCCEEEEEec-ccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCcccccccc
Q 002995 79 CQELEPGDIIWAKLT-GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGL 148 (860)
Q Consensus 79 ~~~f~~GdlVwaK~~-g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~~ 148 (860)
...+++||+|.||.. ---|.+|+|.... ...+.+.|+|.+-....-|+.++|+|+...+
T Consensus 7 ~~~~~~G~~c~A~~s~Dg~wYRA~I~~i~-----------~~~~~~~V~fiDYGN~e~V~~~~Lr~l~~~l 66 (78)
T 2d9t_A 7 GKVWKPGDECFALYWEDNKFYRAEVEALH-----------SSGMTAVVKFTDYGNYEEVLLSNIKPVQTEA 66 (78)
T ss_dssp CCCCCTTCEEEEECTTTCCEEEEEEEEEC-----------SSSSEEEEEETTTTEEEEEEGGGEEECCCCC
T ss_pred ccCCCcCCEEEEEECCCCCEEEEEEEEEe-----------CCCCEEEEEEEcCCCeEEEcHHHeEeCCHHH
Confidence 356899999999985 3469999997631 1134689999988889999999999998753
No 112
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=86.79 E-value=0.53 Score=39.32 Aligned_cols=59 Identities=17% Similarity=0.247 Sum_probs=44.3
Q ss_pred CCCCCCCCCEEEEEec-ccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCccccccc
Q 002995 78 DCQELEPGDIIWAKLT-GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKG 147 (860)
Q Consensus 78 ~~~~f~~GdlVwaK~~-g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~ 147 (860)
....+++||++.||.. ---|.+|+|.... ...+.+.|+|.+-....-|+.++|+|+..+
T Consensus 14 ~~~~~kvGd~C~A~ys~Dg~wYRA~I~~i~-----------~~~~~~~V~fvDYGN~e~V~~~~Lr~l~~~ 73 (77)
T 3pnw_C 14 YAKMWKPGDECFALYWEDNKFYRAEVEALH-----------SSGMTAVVKFIDYGNYEEVLLSNIKPIQTE 73 (77)
T ss_dssp HHTTCCTTCEEEEEETTTTEEEEEEEEEEC-----------TTSSEEEEEETTTCCEEEEEGGGEECC---
T ss_pred hcCCCCcCCEEEEEECCCCCEEEEEEEEEe-----------CCCCEEEEEEEcCCCeEEEeHHHeEECChh
Confidence 3567999999999983 4459999997631 112458899998888999999999998764
No 113
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=86.77 E-value=0.27 Score=40.96 Aligned_cols=27 Identities=33% Similarity=0.743 Sum_probs=23.1
Q ss_pred ccceecCCc--ceeeEEcCCCCcCccccchhh
Q 002995 509 LLCSICGVS--YGACIQCSNTTCRVAYHPLCA 538 (860)
Q Consensus 509 ~~C~~C~~~--~Ga~iqC~~~~C~~~fH~~CA 538 (860)
..| +|++. .+.+|||. .|..|||..|.
T Consensus 17 ~~C-~C~~~~~~~~MI~Cd--~C~~WfH~~Cv 45 (76)
T 1wem_A 17 LYC-ICRQPHNNRFMICCD--RCEEWFHGDCV 45 (76)
T ss_dssp CCS-TTCCCCCSSCEEECS--SSCCEEEHHHH
T ss_pred CEE-ECCCccCCCCEEEeC--CCCCcEeCeEE
Confidence 456 89986 36899998 89999999998
No 114
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=86.17 E-value=0.29 Score=39.87 Aligned_cols=28 Identities=29% Similarity=0.692 Sum_probs=23.2
Q ss_pred ccceecCCc--ceeeEEcCCCCcCccccchhhh
Q 002995 509 LLCSICGVS--YGACIQCSNTTCRVAYHPLCAR 539 (860)
Q Consensus 509 ~~C~~C~~~--~Ga~iqC~~~~C~~~fH~~CA~ 539 (860)
..| +|++. .+.+|||. .|..|||..|.-
T Consensus 20 ~~C-iC~~~~~~~~MIqCd--~C~~WfH~~Cvg 49 (68)
T 3o70_A 20 VTC-FCMKPFAGRPMIECN--ECHTWIHLSCAK 49 (68)
T ss_dssp CCS-TTCCCCTTCCEEECT--TTCCEEETTTTT
T ss_pred eEe-ECCCcCCCCCEEECC--CCCccccccccC
Confidence 456 99985 44799999 799999999983
No 115
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=85.91 E-value=0.15 Score=42.83 Aligned_cols=55 Identities=18% Similarity=0.303 Sum_probs=45.3
Q ss_pred CCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCccccccc
Q 002995 80 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKG 147 (860)
Q Consensus 80 ~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~ 147 (860)
..|++||.|.||...--|-||+|.... ..+.|.|.|.+ ...-=|+..+|+|+.+.
T Consensus 5 ~~~kvGd~clAkwsDg~wY~A~I~~v~------------~~~~y~V~F~D-Gn~E~V~~s~LrPl~~~ 59 (81)
T 2ldm_A 5 SEFQINEQVLASWSDSRFYPAKVTAVN------------KDGTYTVKFYD-GVVQTVKHIHVKAFSKD 59 (81)
Confidence 468999999999887789999997631 12368999998 88889999999999764
No 116
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=85.63 E-value=0.35 Score=37.09 Aligned_cols=28 Identities=25% Similarity=0.566 Sum_probs=22.8
Q ss_pred cceecCCc--ceeeEEcCCCCcCccccchhhh
Q 002995 510 LCSICGVS--YGACIQCSNTTCRVAYHPLCAR 539 (860)
Q Consensus 510 ~C~~C~~~--~Ga~iqC~~~~C~~~fH~~CA~ 539 (860)
.-.+|+++ .+.+|||. .|..+||..|.-
T Consensus 5 ~~C~C~~~~~~~~MI~Cd--~C~~W~H~~Cvg 34 (52)
T 3o7a_A 5 VTCFCMKPFAGRPMIECN--ECHTWIHLSCAK 34 (52)
T ss_dssp BCSTTCCBCTTCCEEECT--TTCCEEETTTTT
T ss_pred eEEEeCCcCCCCCEEEcC--CCCccccccccC
Confidence 44578874 45999999 799999999983
No 117
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.08 E-value=1.4 Score=36.35 Aligned_cols=56 Identities=14% Similarity=0.257 Sum_probs=45.6
Q ss_pred CCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCccccccc
Q 002995 79 CQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKG 147 (860)
Q Consensus 79 ~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~ 147 (860)
...|++||.|.||...--|-||+|.... ..+.+.|.|.+- ..-=|+..+|.|+.+.
T Consensus 7 ~~~~kvGd~clA~wsDg~~Y~A~I~~v~------------~~~~~~V~f~Dy-n~e~v~~~~lrplp~~ 62 (74)
T 2equ_A 7 GFDFKAGEEVLARWTDCRYYPAKIEAIN------------KEGTFTVQFYDG-VIRCLKRMHIKAMPED 62 (74)
T ss_dssp CCCCCTTCEEEEECSSSSEEEEEEEEES------------TTSSEEEEETTS-CEEEECGGGEECCCGG
T ss_pred CCCCCCCCEEEEECCCCCEEEEEEEEEC------------CCCEEEEEEecC-CeEEecHHHCeeCChh
Confidence 4579999999999987789999997631 124689999866 8888999999999874
No 118
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=84.86 E-value=0.4 Score=37.88 Aligned_cols=30 Identities=33% Similarity=0.838 Sum_probs=24.6
Q ss_pred ccceecCCc-ceeeEEcCCCCcC-ccccchhhh
Q 002995 509 LLCSICGVS-YGACIQCSNTTCR-VAYHPLCAR 539 (860)
Q Consensus 509 ~~C~~C~~~-~Ga~iqC~~~~C~-~~fH~~CA~ 539 (860)
..| +|++. .|-+|+|....|. .+||..|.-
T Consensus 10 ~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvg 41 (59)
T 3c6w_A 10 TYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVD 41 (59)
T ss_dssp EET-TTTEECCSEEEECSCTTCSSCEEETGGGT
T ss_pred cEE-ECCCCCCCCeeEeeCCCCCCCCEecccCC
Confidence 356 89873 6899999976798 699999984
No 119
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=84.70 E-value=0.14 Score=57.36 Aligned_cols=49 Identities=22% Similarity=0.567 Sum_probs=37.5
Q ss_pred CccccccCCcccCCCeeEEccccCceeccccccccccC--CCCceeeecccC
Q 002995 397 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPV--NGVLWLCNLCRP 446 (860)
Q Consensus 397 ~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~--~~~~W~C~~C~~ 446 (860)
...++|+...+ ++..+|.||.|..=+|..|.|+...+ ....|+|..|..
T Consensus 5 ~~yCiC~~~~d-~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~ 55 (447)
T 3kv4_A 5 PVYCLCRLPYD-VTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEV 55 (447)
T ss_dssp CEETTTTEECC-TTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHH
T ss_pred CeEEeCCCcCC-CCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCcc
Confidence 45678987532 24569999999999999999986543 224799999975
No 120
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=84.23 E-value=0.39 Score=42.68 Aligned_cols=29 Identities=24% Similarity=0.670 Sum_probs=25.4
Q ss_pred ccceecCCc---ceeeEEcCCCCcCccccchhh
Q 002995 509 LLCSICGVS---YGACIQCSNTTCRVAYHPLCA 538 (860)
Q Consensus 509 ~~C~~C~~~---~Ga~iqC~~~~C~~~fH~~CA 538 (860)
..|.+|+++ .|-+|+|. ..|..|||..|.
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cd-d~C~~WfH~~CV 35 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCE-ASCQKWFHRECT 35 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECT-TTTCCEEEGGGT
T ss_pred CCCCCCCCccCCCCCEEEec-CCcccccccccC
Confidence 369999986 57899998 589999999997
No 121
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=84.14 E-value=0.4 Score=39.42 Aligned_cols=31 Identities=32% Similarity=0.805 Sum_probs=25.2
Q ss_pred CccceecCCc-ceeeEEcCCCCcC-ccccchhhh
Q 002995 508 KLLCSICGVS-YGACIQCSNTTCR-VAYHPLCAR 539 (860)
Q Consensus 508 ~~~C~~C~~~-~Ga~iqC~~~~C~-~~fH~~CA~ 539 (860)
...| +|++. .|.+|+|....|. .+||..|.-
T Consensus 16 ~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvg 48 (71)
T 1wen_A 16 PTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG 48 (71)
T ss_dssp CCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTT
T ss_pred CCEE-ECCCCCCCCEeEeeCCCCCCccEecccCC
Confidence 3467 79984 6899999966699 799999984
No 122
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=83.95 E-value=0.37 Score=36.93 Aligned_cols=28 Identities=21% Similarity=0.567 Sum_probs=23.4
Q ss_pred cceecCCcc---eeeEEcCCCCcCccccchhh
Q 002995 510 LCSICGVSY---GACIQCSNTTCRVAYHPLCA 538 (860)
Q Consensus 510 ~C~~C~~~~---Ga~iqC~~~~C~~~fH~~CA 538 (860)
.|.+|+++. +.+|||.. .|..+||..|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~-~C~~WfH~~Cv 34 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDG-GCDEWFHQVCV 34 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTT-TTCCEEETTTT
T ss_pred cCCCCcCccCCCCcEEEeCC-CCCccCccccc
Confidence 477888863 56999986 79999999997
No 123
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=83.42 E-value=0.24 Score=56.30 Aligned_cols=48 Identities=27% Similarity=0.564 Sum_probs=36.6
Q ss_pred ccccccCCcccCCCeeEEccccCceeccccccccccCC--CCceeeecccC
Q 002995 398 KCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVN--GVLWLCNLCRP 446 (860)
Q Consensus 398 ~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~--~~~W~C~~C~~ 446 (860)
.-++|+...+ .+..+|.||.|..=+|..|.|+...+. ...|+|..|..
T Consensus 38 ~yC~C~~~~d-~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 87 (488)
T 3kv5_D 38 VYCVCRQPYD-VNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAV 87 (488)
T ss_dssp EETTTTEECC-TTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHH
T ss_pred eEEeCCCcCC-CCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcC
Confidence 4449987542 245699999999999999999876532 24799999975
No 124
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=83.28 E-value=0.38 Score=41.54 Aligned_cols=31 Identities=32% Similarity=0.805 Sum_probs=25.3
Q ss_pred CccceecCCc-ceeeEEcCCCCcC-ccccchhhh
Q 002995 508 KLLCSICGVS-YGACIQCSNTTCR-VAYHPLCAR 539 (860)
Q Consensus 508 ~~~C~~C~~~-~Ga~iqC~~~~C~-~~fH~~CA~ 539 (860)
...| +|++. .|-+|+|....|. .|||..|.-
T Consensus 36 ~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVg 68 (91)
T 1weu_A 36 PTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG 68 (91)
T ss_dssp CBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTT
T ss_pred CcEE-ECCCCCCCCEeEecCCCCCCCCEecccCC
Confidence 3456 99984 6899999977798 799999984
No 125
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=82.59 E-value=0.56 Score=37.14 Aligned_cols=30 Identities=33% Similarity=0.838 Sum_probs=24.4
Q ss_pred ccceecCCc-ceeeEEcCCCCcC-ccccchhhh
Q 002995 509 LLCSICGVS-YGACIQCSNTTCR-VAYHPLCAR 539 (860)
Q Consensus 509 ~~C~~C~~~-~Ga~iqC~~~~C~-~~fH~~CA~ 539 (860)
..| +|++. .|.+|+|....|. .+||..|.-
T Consensus 11 ~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvg 42 (60)
T 2vnf_A 11 TYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG 42 (60)
T ss_dssp EET-TTTEECCSEEEECSCTTCSSCEEETGGGT
T ss_pred CEE-ECCCcCCCCEEEeCCCCCCCceEehhcCC
Confidence 356 89873 6899999966688 799999985
No 126
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=82.53 E-value=0.47 Score=41.62 Aligned_cols=26 Identities=42% Similarity=0.858 Sum_probs=22.6
Q ss_pred cceecCCc--ceeeEEcCCCCcCccccchhh
Q 002995 510 LCSICGVS--YGACIQCSNTTCRVAYHPLCA 538 (860)
Q Consensus 510 ~C~~C~~~--~Ga~iqC~~~~C~~~fH~~CA 538 (860)
+| +|+.. .|.+|+|. .|..+||..|.
T Consensus 30 rC-iC~~~~~~~~mi~Cd--~C~~w~H~~C~ 57 (98)
T 2lv9_A 30 RC-ICGFTHDDGYMICCD--KCSVWQHIDCM 57 (98)
T ss_dssp CC-TTSCCSCSSCEEEBT--TTCBEEETTTT
T ss_pred Ee-ECCCccCCCcEEEcC--CCCCcCcCcCC
Confidence 56 78874 68999998 89999999997
No 127
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=82.40 E-value=0.49 Score=38.16 Aligned_cols=28 Identities=29% Similarity=0.812 Sum_probs=24.2
Q ss_pred cceecCCcc---eeeEEcCCCCcCccccchhh
Q 002995 510 LCSICGVSY---GACIQCSNTTCRVAYHPLCA 538 (860)
Q Consensus 510 ~C~~C~~~~---Ga~iqC~~~~C~~~fH~~CA 538 (860)
.|.+|+++. .-+|+|.. .|..+||..|.
T Consensus 10 ~C~~C~~p~~~~~~mI~CD~-~C~~WfH~~Cv 40 (65)
T 2vpb_A 10 PCGICTNEVNDDQDAILCEA-SCQKWFHRICT 40 (65)
T ss_dssp BCTTTCSBCCTTSCEEEBTT-TTCCEEEHHHH
T ss_pred cCccCCCccCCCCCeEeccc-CccccCchhcc
Confidence 699999863 46999984 89999999997
No 128
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=82.30 E-value=0.48 Score=39.23 Aligned_cols=29 Identities=28% Similarity=0.606 Sum_probs=24.2
Q ss_pred ccceecCCc--ceeeEEcCCCCcCccccchhhh
Q 002995 509 LLCSICGVS--YGACIQCSNTTCRVAYHPLCAR 539 (860)
Q Consensus 509 ~~C~~C~~~--~Ga~iqC~~~~C~~~fH~~CA~ 539 (860)
..|.+|++. .+.+|+|. .|..+||..|.-
T Consensus 19 ~~C~~C~~~~~~~~mi~CD--~C~~wfH~~Cv~ 49 (75)
T 2k16_A 19 WICPGCNKPDDGSPMIGCD--DCDDWYHWPCVG 49 (75)
T ss_dssp ECBTTTTBCCSSCCEEECS--SSSSEEEHHHHT
T ss_pred cCCCCCCCCCCCCCEEEcC--CCCcccccccCC
Confidence 469999885 34799999 899999999973
No 129
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=81.89 E-value=0.56 Score=40.35 Aligned_cols=30 Identities=33% Similarity=0.883 Sum_probs=24.6
Q ss_pred CccceecCC-cceeeEEcCCCCcC-ccccchhh
Q 002995 508 KLLCSICGV-SYGACIQCSNTTCR-VAYHPLCA 538 (860)
Q Consensus 508 ~~~C~~C~~-~~Ga~iqC~~~~C~-~~fH~~CA 538 (860)
...| +|++ ..|-+|+|....|. .|||..|.
T Consensus 26 ~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CV 57 (90)
T 2jmi_A 26 EVYC-FCRNVSYGPMVACDNPACPFEWFHYGCV 57 (90)
T ss_dssp SCCS-TTTCCCSSSEECCCSSSCSCSCEETTTS
T ss_pred CcEE-EeCCCCCCCEEEecCCCCccccCcCccC
Confidence 4567 8997 47899999966677 79999998
No 130
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=81.88 E-value=0.94 Score=40.91 Aligned_cols=75 Identities=20% Similarity=0.362 Sum_probs=45.1
Q ss_pred ccccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccCCCC-----CCCCCccccCC---------CCC
Q 002995 398 KCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPGAP-----EPPPPCCLCPV---------VGG 463 (860)
Q Consensus 398 ~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~~~~-----~~~~~C~lC~~---------~gG 463 (860)
+|.+|+.. .|+.|....|..|+| +..|.|..|..-.- .....|..|+. ...
T Consensus 9 ~C~~C~~~---------~C~~C~~c~~~~~~~------~~~~~~~~c~~~~~~~~~~~~~~~c~~c~~c~~c~~~~~~~~ 73 (117)
T 4bbq_A 9 KCKACVQG---------ECGVCHYCRDMKKFG------GPGRMKQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEK 73 (117)
T ss_dssp CSHHHHSC---------CCSCSHHHHHSGGGT------SCCCSCCCCGGGCCSSCBCCTTCBCTTTCCBCCHHHHCCGGG
T ss_pred cCcCcCCc---------CCCCCCCCcCCcccC------CCCccccchhheeeccccccccccccccCcccccccccccCc
Confidence 56666643 299999999999987 33588888854211 11123333322 112
Q ss_pred Cceec-CCCceeccccccccCceEE
Q 002995 464 AMKPT-TDGRWAHLACAIWIPETCL 487 (860)
Q Consensus 464 alk~t-~~g~wvH~~Ca~~~p~~~~ 487 (860)
.|... ....|+|..|.-...+..+
T Consensus 74 ~m~~C~~C~~~~H~~C~~~~~~~~~ 98 (117)
T 4bbq_A 74 KLMECCICNEIVHPGCLQMDGEGLL 98 (117)
T ss_dssp SCEEETTTCCEECGGGCCSCCCCEE
T ss_pred ceEEeeecCCeEECCCCCCCccccc
Confidence 34444 3678999999876555443
No 131
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=81.83 E-value=2.4 Score=33.80 Aligned_cols=54 Identities=11% Similarity=0.046 Sum_probs=41.8
Q ss_pred CCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCccccc
Q 002995 80 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFL 145 (860)
Q Consensus 80 ~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~ 145 (860)
..|++||-|.|.-.-=-.-||.|.... ...+...|+|+ |+.-.|+.-++|.++.
T Consensus 12 ~~f~vGddVLA~wtDGl~Y~gtI~~V~-----------~~~gtC~V~F~-D~s~~w~~~kdi~~~~ 65 (66)
T 2eqj_A 12 CKFEEGQDVLARWSDGLFYLGTIKKIN-----------ILKQSCFIIFE-DSSKSWVLWKDIQTGA 65 (66)
T ss_dssp CCSCTTCEEEEECTTSCEEEEEEEEEE-----------TTTTEEEEEET-TTEEEEEETTTEECCC
T ss_pred ccccCCCEEEEEEccCcEEEeEEEEEc-----------cCCcEEEEEEc-cCCEEEEEeecccccC
Confidence 479999999999766666789996531 12456889998 7788999999998763
No 132
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=81.55 E-value=0.57 Score=37.19 Aligned_cols=30 Identities=37% Similarity=0.824 Sum_probs=26.1
Q ss_pred CccceecCCcceeeEEcCCCCcCccccchhhhh
Q 002995 508 KLLCSICGVSYGACIQCSNTTCRVAYHPLCARA 540 (860)
Q Consensus 508 ~~~C~~C~~~~Ga~iqC~~~~C~~~fH~~CA~~ 540 (860)
...|.+|+. .|.+|.|. .|..+||..|...
T Consensus 11 ~~~C~vC~~-~g~ll~CD--~C~~~fH~~Cl~p 40 (61)
T 2l5u_A 11 QDYCEVCQQ-GGEIILCD--TCPRAYHMVCLDP 40 (61)
T ss_dssp CSSCTTTSC-CSSEEECS--SSSCEEEHHHHCT
T ss_pred CCCCccCCC-CCcEEECC--CCChhhhhhccCC
Confidence 357999998 68999998 8999999999754
No 133
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=82.03 E-value=0.31 Score=41.54 Aligned_cols=59 Identities=8% Similarity=0.068 Sum_probs=47.3
Q ss_pred CCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCE--EEEeCCCccccccc
Q 002995 79 CQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVISFLKG 147 (860)
Q Consensus 79 ~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~--awv~~~~l~~f~~~ 147 (860)
...|.+|+.|++.-.+ -|.+|.|++... ..+...|.|.|-|-+.+ -||+.++|..+++.
T Consensus 10 ~~~~~~Gekv~~~~~~-~~y~AkIl~i~~---------~~~~~~YyVHY~GwNkR~DEWV~~~Rl~k~t~e 70 (85)
T 2lrq_A 10 NTLFVDGERVLCFHGP-LIYEAKVLKTKP---------DATPVEYYIHYAGWSKNWDEWVPENRVLKYNDD 70 (85)
Confidence 4579999999999876 579999987532 12345799999998875 79999999999875
No 134
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=80.98 E-value=0.59 Score=36.92 Aligned_cols=28 Identities=36% Similarity=0.830 Sum_probs=25.2
Q ss_pred ccceecCCcceeeEEcCCCCcCccccchhhh
Q 002995 509 LLCSICGVSYGACIQCSNTTCRVAYHPLCAR 539 (860)
Q Consensus 509 ~~C~~C~~~~Ga~iqC~~~~C~~~fH~~CA~ 539 (860)
..|.+|+. .|.+|.|. .|..+||..|..
T Consensus 6 ~~C~vC~~-~g~ll~Cd--~C~~~fH~~Cl~ 33 (60)
T 2puy_A 6 DFCSVCRK-SGQLLMCD--TCSRVYHLDCLD 33 (60)
T ss_dssp SSCTTTCC-CSSCEECS--SSSCEECGGGSS
T ss_pred CCCcCCCC-CCcEEEcC--CCCcCEECCcCC
Confidence 47999998 68999998 899999999985
No 135
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=80.27 E-value=2.2 Score=36.44 Aligned_cols=57 Identities=18% Similarity=0.202 Sum_probs=44.5
Q ss_pred CCCCCCCEEEEEec-ccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCccccccc
Q 002995 80 QELEPGDIIWAKLT-GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKG 147 (860)
Q Consensus 80 ~~f~~GdlVwaK~~-g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~ 147 (860)
..+++||++.||.. .--|-+|+|.... ...+.+.|.|.+-...--|+.++|+|....
T Consensus 9 ~~~kvGd~C~A~ys~Dg~wYrA~I~~i~-----------~~~~~~~V~fiDYGN~E~V~~~~Lrp~~~~ 66 (88)
T 1g5v_A 9 QQWKVGDKCSAIWSEDGCIYPATIASID-----------FKRETCVVVYTGYGNREEQNLSDLLSPICE 66 (88)
T ss_dssp CCCCSSCEEEEECTTTCCEEEEEEEEEE-----------TTTTEEEEEETTTCCEEEEEGGGCBCCC--
T ss_pred CCCCCCCEEEEEECCCCCEEEEEEEEec-----------CCCCEEEEEEecCCCEEEEcHHHcccCChh
Confidence 46999999999984 5569999997631 113568999998888889999999998764
No 136
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=80.21 E-value=0.98 Score=40.77 Aligned_cols=38 Identities=24% Similarity=0.574 Sum_probs=27.2
Q ss_pred CCeeEEccccCceecccccccccc--CC---CCceeeecccCC
Q 002995 410 NNLFLQCDKCRMMVHARCYGELEP--VN---GVLWLCNLCRPG 447 (860)
Q Consensus 410 ~n~ll~C~~C~~~vH~~CYg~~~~--~~---~~~W~C~~C~~~ 447 (860)
+..|++|+.|.-.||..|.++... ++ ...|.|..|...
T Consensus 72 ~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~ 114 (117)
T 4bbq_A 72 EKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQE 114 (117)
T ss_dssp GGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC--
T ss_pred CcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCC
Confidence 345899999999999999985321 11 125999999854
No 137
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=80.07 E-value=0.97 Score=42.96 Aligned_cols=50 Identities=26% Similarity=0.550 Sum_probs=39.5
Q ss_pred CCccccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccCC
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 447 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~~ 447 (860)
...|.+|.....--.|.-..|..|...|-+.|= +.... ...|+|..|...
T Consensus 68 ~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~-~~~~~-~~~W~C~vC~k~ 117 (153)
T 2zet_C 68 ETHCARCLQPYRLLLNSRRQCLECSLFVCKSCS-HAHPE-EQGWLCDPCHLA 117 (153)
T ss_dssp GTBCTTTCCBGGGCSSCCEECTTTCCEECGGGE-ECCSS-SSSCEEHHHHHH
T ss_pred CccchhhcCccccccCCCCcCCCCCchhhcccc-cccCC-CCcEeeHHHHHH
Confidence 469999998765666778899999999999995 33333 348999999753
No 138
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=79.70 E-value=0.55 Score=37.96 Aligned_cols=28 Identities=29% Similarity=0.752 Sum_probs=24.7
Q ss_pred ccceecCCcceeeEEcCCCCcCccccchhhh
Q 002995 509 LLCSICGVSYGACIQCSNTTCRVAYHPLCAR 539 (860)
Q Consensus 509 ~~C~~C~~~~Ga~iqC~~~~C~~~fH~~CA~ 539 (860)
..|.+|+. .|.+|.|. .|..+||..|..
T Consensus 13 ~~C~vC~~-~~~ll~Cd--~C~~~~H~~Cl~ 40 (66)
T 2lri_C 13 ARCGVCGD-GTDVLRCT--HCAAAFHWRCHF 40 (66)
T ss_dssp CCCTTTSC-CTTCEECS--SSCCEECHHHHC
T ss_pred CCcCCCCC-CCeEEECC--CCCCceecccCC
Confidence 46999997 78899998 899999999973
No 139
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=79.58 E-value=1.2 Score=37.04 Aligned_cols=60 Identities=13% Similarity=0.141 Sum_probs=45.8
Q ss_pred CCCCCCCCEEEEEecc---cCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCE--EEEeCCCccccccc
Q 002995 79 CQELEPGDIIWAKLTG---HAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVISFLKG 147 (860)
Q Consensus 79 ~~~f~~GdlVwaK~~g---~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~--awv~~~~l~~f~~~ 147 (860)
...|.+|+.|+++.+. --|.||.|++.. ...+...|.|.|-|-+.+ -||+.++|..+...
T Consensus 3 ~~~~~vGekV~~~~~d~k~~~~y~AkIl~i~---------~~~~~~~Y~VHY~gwnkr~DEWV~~~ri~~~~~~ 67 (76)
T 2lcc_A 3 MEPCLTGTKVKVKYGRGKTQKIYEASIKSTE---------IDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLDK 67 (76)
T ss_dssp CCCSSTTCEEEEEEEETTEEEEEEEEEEEEE---------EETTEEEEEEEETTSCCSSCEEEEGGGEECSSCS
T ss_pred ccccCCCCEEEEEeCCCCCCCEEEEEEEEEE---------ccCCceEEEEEeCCcCCCceEecChhhccccccc
Confidence 4579999999999862 247899998632 122345699999998874 89999999888754
No 140
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=79.22 E-value=0.55 Score=45.67 Aligned_cols=28 Identities=39% Similarity=0.848 Sum_probs=24.2
Q ss_pred CccceecCCc---ceeeEEcCCCCcCccccchhh
Q 002995 508 KLLCSICGVS---YGACIQCSNTTCRVAYHPLCA 538 (860)
Q Consensus 508 ~~~C~~C~~~---~Ga~iqC~~~~C~~~fH~~CA 538 (860)
...| +|+++ .|.+|+|. .|..|||..|.
T Consensus 8 ~~~C-~C~~~~~~~~~mi~Cd--~C~~WfH~~Cv 38 (174)
T 2ri7_A 8 KLYC-ICKTPEDESKFYIGCD--RCQNWYHGRCV 38 (174)
T ss_dssp CEET-TTTEECCTTSCEEECT--TTCCEEEHHHH
T ss_pred CcEe-eCCCCCCCCCCEeECC--CCCchhChhhc
Confidence 3568 99985 57899998 89999999998
No 141
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.04 E-value=0.69 Score=35.96 Aligned_cols=29 Identities=34% Similarity=0.805 Sum_probs=25.5
Q ss_pred ccceecCCcceeeEEcCCCCcCccccchhhhh
Q 002995 509 LLCSICGVSYGACIQCSNTTCRVAYHPLCARA 540 (860)
Q Consensus 509 ~~C~~C~~~~Ga~iqC~~~~C~~~fH~~CA~~ 540 (860)
..|.+|+. .|.+|.|. .|..+||..|...
T Consensus 10 ~~C~vC~~-~g~ll~Cd--~C~~~~H~~Cl~p 38 (56)
T 2yql_A 10 DFCSVCRK-SGQLLMCD--TCSRVYHLDCLDP 38 (56)
T ss_dssp CSCSSSCC-SSCCEECS--SSSCEECSSSSSS
T ss_pred CCCccCCC-CCeEEEcC--CCCcceECccCCC
Confidence 47999998 68999998 8999999999853
No 142
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=79.03 E-value=0.72 Score=37.21 Aligned_cols=29 Identities=31% Similarity=0.690 Sum_probs=25.4
Q ss_pred CccceecCCcceeeEEcCCCCcCccccchhhh
Q 002995 508 KLLCSICGVSYGACIQCSNTTCRVAYHPLCAR 539 (860)
Q Consensus 508 ~~~C~~C~~~~Ga~iqC~~~~C~~~fH~~CA~ 539 (860)
...|.+|+. .|.+|.|. .|..+||..|..
T Consensus 8 ~~~C~vC~~-~g~ll~CD--~C~~~fH~~Cl~ 36 (66)
T 1xwh_A 8 EDECAVCRD-GGELICCD--GCPRAFHLACLS 36 (66)
T ss_dssp CCSBSSSSC-CSSCEECS--SCCCEECTTTSS
T ss_pred CCCCccCCC-CCCEEEcC--CCChhhcccccC
Confidence 357999998 68999998 899999999974
No 143
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=78.73 E-value=1.2 Score=34.91 Aligned_cols=33 Identities=24% Similarity=0.343 Sum_probs=29.2
Q ss_pred CceeeeeeeecCCCCceEEEecC-CCcccccccc
Q 002995 3 DWYSGFVVGYDSESNRHHVKYVD-GDEEDLILSN 35 (860)
Q Consensus 3 ~~~~g~v~~~~~~~~~h~~~y~d-~d~e~~~l~~ 35 (860)
.||.+.|.+.++..+...|.|.| |..|.+.+++
T Consensus 19 ~wYrA~I~~i~~~~~~~~V~f~DYGn~e~v~~~~ 52 (59)
T 1mhn_A 19 CIYPATIASIDFKRETCVVVYTGYGNREEQNLSD 52 (59)
T ss_dssp CEEEEEEEEEETTTTEEEEEETTTTEEEEEEGGG
T ss_pred CEEEEEEEEEcCCCCEEEEEEEcCCCEEEEcHHH
Confidence 69999999999888999999999 8888887754
No 144
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=78.71 E-value=1.7 Score=38.17 Aligned_cols=65 Identities=8% Similarity=0.056 Sum_probs=47.2
Q ss_pred CCCCCCCCEEEEEec----ccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCE--EEEeCCCccccccc
Q 002995 79 CQELEPGDIIWAKLT----GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVISFLKG 147 (860)
Q Consensus 79 ~~~f~~GdlVwaK~~----g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~--awv~~~~l~~f~~~ 147 (860)
...|.+|+.|++.-. |=-++.|.|++.....+ ....+...|.|.|-|-+.. -||+.++|..|++.
T Consensus 17 ~~~f~~GEkVLc~h~d~~kg~~lYeAKIl~v~~~~~----~~~~~~~~Y~VHY~GWn~rwDEWV~edRilk~~ee 87 (101)
T 3m9q_A 17 TPLFHKGEIVLCYEPDKSKARVLYTSKVLNVFERRN----EHGLRFYEYKIHFQGWRPSYDRAVRATVLLKDTEE 87 (101)
T ss_dssp CCCCCTTCEEEEECCCTTSCCCEEEEEEEEEEEEEC----TTSCEEEEEEEEETTSCGGGCEEECGGGEEECCHH
T ss_pred CCcccCCCEEEEEecCCCCCCcceEeEEEEEEecCC----ccccCceEEEEEeCCCCcCceeecCHHHcccCCHH
Confidence 457999999999774 45578999987532111 0012234699999998874 89999999999874
No 145
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=78.61 E-value=1.1 Score=39.96 Aligned_cols=66 Identities=14% Similarity=0.061 Sum_probs=44.5
Q ss_pred CCCCCCCCCEEEEEec----ccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCE--EEEeCCCccccccc
Q 002995 78 DCQELEPGDIIWAKLT----GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVISFLKG 147 (860)
Q Consensus 78 ~~~~f~~GdlVwaK~~----g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~--awv~~~~l~~f~~~ 147 (860)
....|.+|+.|++==. |=-.+-|.|++...... ......-.|.|.|-|-+.. -||+.++|..+++.
T Consensus 16 ~k~~F~~gEkVLc~h~d~~kg~llYeAKIl~v~~~~~----~~~~~~~~Y~VHY~GWn~~WDEWV~~drllk~nee 87 (110)
T 3oa6_A 16 MKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKD----EKGRKIPEYLIHFNGWNRSWDRWAAEDHVLRDTDE 87 (110)
T ss_dssp --CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEEC----TTCCEEEEEEEEETTSCGGGCEEEEGGGEEECCHH
T ss_pred CCcccCCCCEEEEEecCCCCCcccEEEEEEEEEeccC----CcCCcccEEEEEECCcCcchhhccChhhhhcCCHH
Confidence 3457999999999432 43467899987422111 0001113599999999884 79999999999874
No 146
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=77.98 E-value=1.4 Score=33.83 Aligned_cols=33 Identities=33% Similarity=0.554 Sum_probs=27.1
Q ss_pred CceeeeeeeecCCCCceEEEecC-CCcccccccc
Q 002995 3 DWYSGFVVGYDSESNRHHVKYVD-GDEEDLILSN 35 (860)
Q Consensus 3 ~~~~g~v~~~~~~~~~h~~~y~d-~d~e~~~l~~ 35 (860)
.||.+.|.+.++..+.-.|.|.| |..|.+.+++
T Consensus 17 ~wYrA~I~~i~~~~~~~~V~fvDYGn~e~v~~~~ 50 (54)
T 3s6w_A 17 KFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSN 50 (54)
T ss_dssp EEEEEEEEEC--CCSEEEEEETTTCCEEEEEGGG
T ss_pred CEEEEEEEEEeCCCCEEEEEEEccCCeEEEeHHH
Confidence 69999999999888889999998 8888887754
No 147
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.64 E-value=1.2 Score=37.48 Aligned_cols=52 Identities=21% Similarity=0.558 Sum_probs=29.7
Q ss_pred cCCCccccccCCcccCCCeeE-Ec--cccCceeccccccccccCCCCceeeecccCC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFL-QC--DKCRMMVHARCYGELEPVNGVLWLCNLCRPG 447 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll-~C--~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~~ 447 (860)
.+...|.||+...+.++ .++ -| .+..-.||+.|.-.=....+ ...|+.|+..
T Consensus 13 ~~~~~C~IC~~~~~~~~-~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~-~~~CplCr~~ 67 (80)
T 2d8s_A 13 SSQDICRICHCEGDDES-PLITPCHCTGSLHFVHQACLQQWIKSSD-TRCCELCKYE 67 (80)
T ss_dssp TTSCCCSSSCCCCCSSS-CEECSSSCCSSSCCEETTHHHHHHHHHC-CSBCSSSCCB
T ss_pred CCCCCCeEcCccccCCC-eeEeccccCCcCCeeCHHHHHHHHhhCC-CCCCCCCCCe
Confidence 44579999997654433 344 22 23358999999751110111 2467777653
No 148
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=76.58 E-value=4.6 Score=32.34 Aligned_cols=52 Identities=6% Similarity=0.099 Sum_probs=40.6
Q ss_pred CCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCccccc
Q 002995 80 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFL 145 (860)
Q Consensus 80 ~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~ 145 (860)
..|..|+-|++|-.-=-...|.|++.. ....+|+|. |++-.|+..++|..+.
T Consensus 14 ~~~~~geDVL~rw~DG~fYLGtIVd~~-------------~~~ClV~Fe-D~S~~Wv~~kdi~kl~ 65 (69)
T 2xk0_A 14 VTYALQEDVFIKCNDGRFYLGTIIDQT-------------SDQYLIRFD-DQSEQWCEPDKLRKLG 65 (69)
T ss_dssp CCCCTTCEEEEECTTSCEEEEEEEEEC-------------SSCEEEEET-TCCEEEECTTTEECSS
T ss_pred cccccCCeEEEEecCCCEEEEEEEecC-------------CceEEEEec-CCcceeeeHHHHHhhc
Confidence 689999999999776666788886521 234788876 7788999999998764
No 149
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.27 E-value=4.6 Score=34.40 Aligned_cols=57 Identities=12% Similarity=0.027 Sum_probs=44.8
Q ss_pred cCCCCCCCCCEEEEEe----cccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCE--EEEeCCCcc
Q 002995 77 DDCQELEPGDIIWAKL----TGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVI 142 (860)
Q Consensus 77 ~~~~~f~~GdlVwaK~----~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~--awv~~~~l~ 142 (860)
.....|.+|+.|++.. ++--|-+|.|+.... ..+...|.|.|-|-+.+ -||+.++|.
T Consensus 5 ~~~~~~~vG~kv~v~~~~~~~~~~~y~AkIl~i~~---------~~~~~~YyVHY~g~NkRlDEWV~~~rl~ 67 (87)
T 2eko_A 5 SSGGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKD---------ISGRKLFYVHYIDFNRRLDEWVTHERLD 67 (87)
T ss_dssp CSSCSCCTTCEEEBCEECTTCCEECCEEEEEEECC---------SSSCCCEEEEECSSCSCCCEEECTTTBC
T ss_pred cccccccCCCEEEEEEcccCCCCeEEEEEEEEEEE---------cCCCcEEEEEeCCCCcccccccCHhHcc
Confidence 3456899999999998 366688999987432 12445799999999885 899999995
No 150
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=76.13 E-value=0.75 Score=38.12 Aligned_cols=26 Identities=23% Similarity=0.696 Sum_probs=22.3
Q ss_pred ceecCCc---ceeeEEcCCCCcCccccchhh
Q 002995 511 CSICGVS---YGACIQCSNTTCRVAYHPLCA 538 (860)
Q Consensus 511 C~~C~~~---~Ga~iqC~~~~C~~~fH~~CA 538 (860)
.++|+++ .+.+|||. .|..+||..|.
T Consensus 12 yCiC~~~~~~~~~MI~Cd--~C~~WfH~~Cv 40 (75)
T 3kqi_A 12 YCVCRLPYDVTRFMIECD--ACKDWFHGSCV 40 (75)
T ss_dssp ETTTTEECCTTSCEEECT--TTCCEEEHHHH
T ss_pred EEECCCcCCCCCCEEEcC--CCCCCEecccc
Confidence 4489885 46899999 79999999998
No 151
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.00 E-value=6.3 Score=30.87 Aligned_cols=56 Identities=14% Similarity=0.052 Sum_probs=41.9
Q ss_pred CCCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCccccc
Q 002995 78 DCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFL 145 (860)
Q Consensus 78 ~~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~ 145 (860)
....|+.|+-|+|+-+-=-.-||.|...... .....|+|+ |++-.|+.-++|.+..
T Consensus 4 g~~~f~eGqdVLarWsDGlfYlgtV~kV~~~-----------~~~ClV~Fe-D~s~~wv~~kdi~~~~ 59 (63)
T 2e5q_A 4 GSSGLTEGQYVLCRWTDGLYYLGKIKRVSSS-----------KQSCLVTFE-DNSKYWVLWKDIQHAG 59 (63)
T ss_dssp SCCCCCTTCEEEEECTTSCEEEEEECCCCST-----------TSEEEEEET-TSCEEEEEGGGEECCS
T ss_pred CccceecCCEEEEEecCCCEEEEEEEEEecC-----------CCEEEEEEc-cCceeEEEeecccccC
Confidence 3568999999999977777778999654221 233678877 7788999999887753
No 152
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=74.94 E-value=1 Score=34.16 Aligned_cols=29 Identities=31% Similarity=0.801 Sum_probs=24.1
Q ss_pred cceecCCc--ceeeEEcCCCCcCccccchhhhh
Q 002995 510 LCSICGVS--YGACIQCSNTTCRVAYHPLCARA 540 (860)
Q Consensus 510 ~C~~C~~~--~Ga~iqC~~~~C~~~fH~~CA~~ 540 (860)
.|.+|++. .+.+|.|. .|..+||..|...
T Consensus 2 ~C~vC~~~~~~~~ll~Cd--~C~~~~H~~Cl~p 32 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCD--ECNKAFHLFCLRP 32 (51)
T ss_dssp CCTTTCCSSCCSCCEECT--TTCCEECHHHHCT
T ss_pred CCCCCCCCCCCCCEEECC--CCChhhCcccCCC
Confidence 58899874 35799998 8999999999843
No 153
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=74.93 E-value=2.2 Score=33.09 Aligned_cols=51 Identities=35% Similarity=0.760 Sum_probs=35.3
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceeccccccc-cccCCCCceeeeccc
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGE-LEPVNGVLWLCNLCR 445 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~-~~~~~~~~W~C~~C~ 445 (860)
++...|.||....-.+. .=-.|.-|.+.+-..|=|- .......-|.|..|.
T Consensus 7 ~d~~~C~iC~KTKFADG-~Gh~C~yCk~r~CaRCGg~v~lr~~k~~WvC~lC~ 58 (62)
T 2a20_A 7 GDAPTCGICHKTKFADG-CGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCR 58 (62)
T ss_dssp SCCCCCSSSSCSCCCSS-CCEEBTTTCCEECTTSEEEEESSTTCEEEEEHHHH
T ss_pred CCcchhhhhccceeccC-CCccccccCCeeecccCCEeeecCCeEEEEehhhh
Confidence 56689999987542222 1236888888888888763 334455689999996
No 154
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=74.86 E-value=0.77 Score=36.42 Aligned_cols=29 Identities=31% Similarity=0.762 Sum_probs=25.2
Q ss_pred CccceecCCcceeeEEcCCCCcCccccchhhh
Q 002995 508 KLLCSICGVSYGACIQCSNTTCRVAYHPLCAR 539 (860)
Q Consensus 508 ~~~C~~C~~~~Ga~iqC~~~~C~~~fH~~CA~ 539 (860)
...|.+|+. .|.+|.|. .|..+||..|..
T Consensus 9 ~~~C~vC~~-~g~ll~Cd--~C~~~fH~~Cl~ 37 (61)
T 1mm2_A 9 MEFCRVCKD-GGELLCCD--TCPSSYHIHCLN 37 (61)
T ss_dssp CSSCTTTCC-CSSCBCCS--SSCCCBCSSSSS
T ss_pred CCcCCCCCC-CCCEEEcC--CCCHHHcccccC
Confidence 357999997 78999998 899999999975
No 155
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=73.15 E-value=2.1 Score=32.08 Aligned_cols=34 Identities=26% Similarity=0.405 Sum_probs=26.0
Q ss_pred CCccccccCCcccCCCeeEEccccCceecccccc
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg 429 (860)
...|++|...--.-..+-+.|..|++.+|..|..
T Consensus 11 pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~ 44 (50)
T 1ptq_A 11 PTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCRE 44 (50)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHT
T ss_pred CCCcCCCCceeeccCCccCEeCCCCCeECHHHhh
Confidence 3689999764322234578999999999999976
No 156
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=72.99 E-value=7.1 Score=31.91 Aligned_cols=52 Identities=15% Similarity=0.096 Sum_probs=40.9
Q ss_pred CCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCccc
Q 002995 80 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVIS 143 (860)
Q Consensus 80 ~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~ 143 (860)
..|..|+=|+||-.-=-.-+|.|+.... ....++|+|. |++-.|+.-++|.+
T Consensus 25 ~~f~eGeDVLarwsDGlfYLGTI~kV~~-----------~~e~ClV~F~-D~S~~W~~~kdi~~ 76 (79)
T 2m0o_A 25 PRLWEGQDVLARWTDGLLYLGTIKKVDS-----------AREVCLVQFE-DDSQFLVLWKDISP 76 (79)
T ss_dssp CCCCTTCEEEBCCTTSCCCEEEEEEEET-----------TTTEEEEEET-TSCEEEEETTTBCC
T ss_pred ceeccCCEEEEEecCCCEEeEEEEEecc-----------CCCEEEEEEc-CCCeEEEEeecccc
Confidence 5899999999998887888999975321 1234788877 77889999999875
No 157
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=72.58 E-value=2.7 Score=38.99 Aligned_cols=53 Identities=21% Similarity=0.589 Sum_probs=39.9
Q ss_pred CCCccccccCCcccCCCeeEEccccCceecccccccc-ccCCCCceeeecccCC
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGEL-EPVNGVLWLCNLCRPG 447 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~-~~~~~~~W~C~~C~~~ 447 (860)
+...|.+|...-..-.|.=..|..|...|-+.|=+.. ..+....|+|..|...
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k~ 107 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQ 107 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHH
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccCCccCCCCCccceechhhHHH
Confidence 3468999998765555666899999999999996643 2234458999999753
No 158
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=72.46 E-value=7.3 Score=33.24 Aligned_cols=58 Identities=12% Similarity=0.042 Sum_probs=44.8
Q ss_pred CCCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCC-E-EEEeCC--Ccccccc
Q 002995 78 DCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHD-F-ARINVK--QVISFLK 146 (860)
Q Consensus 78 ~~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~-~-awv~~~--~l~~f~~ 146 (860)
....|++|.-|=|.=.--||.||.|...+ .....|+|+|-|-.. | .|+..+ +|.|+.-
T Consensus 16 ~~~~F~vGmkLEA~D~~~~~~~a~i~~v~-----------~~~~~v~VHfdGW~~~yDeWv~~dS~~I~P~g~ 77 (88)
T 2eqm_A 16 PGITFEIGARLEALDYLQKWYPSRIEKID-----------YEEGKMLVHFERWSHRYDEWIYWDSNRLRPLER 77 (88)
T ss_dssp SSCCCCSSCEEEEECTTSCEEEEEEEEEE-----------TTTTEEEEEESSSTTTEEEEEETTSCCEECCCC
T ss_pred CcCcCCCCCEEEEEcCCCCeeEEEEEEEe-----------ccCCEEEEEECCCCCcccEEeeCCCCcEecccc
Confidence 35689999999999877799999997421 113359999999876 4 799988 7888764
No 159
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=71.58 E-value=1.8 Score=38.38 Aligned_cols=66 Identities=15% Similarity=0.097 Sum_probs=45.0
Q ss_pred CCCCCCCCCEEEEEecc----cCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCE--EEEeCCCccccccc
Q 002995 78 DCQELEPGDIIWAKLTG----HAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVISFLKG 147 (860)
Q Consensus 78 ~~~~f~~GdlVwaK~~g----~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~--awv~~~~l~~f~~~ 147 (860)
....|.+|+-|++.-.+ =-|.+|.|++........+ .+...|.|.|.|-+.. -||+.++|..|++.
T Consensus 16 ~~~~F~~GEkVLc~hgd~~k~~~lYeAKIl~v~~~~~~~g----~~~~~Y~VHY~GWn~~wDEWV~e~rllk~~ee 87 (110)
T 3m9p_A 16 MKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKG----RKIPEYLIHFNGWNRSWDRWAAEDHVLRDTDE 87 (110)
T ss_dssp --CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECTTC----CEEEEEEEEETTSCGGGCEEEEGGGEEECCHH
T ss_pred CCCcccCCCEEEEEcCCCCCCCCceeeEEEEEEeccCccc----ccceEEEEEECCCCcchhhccCHhhhhcCCHH
Confidence 34579999999997443 2467899987532111000 0124699999998764 89999999999874
No 160
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.34 E-value=2.9 Score=34.48 Aligned_cols=30 Identities=20% Similarity=0.306 Sum_probs=25.7
Q ss_pred CceeeeeeeecCCCCceEEEecCCCcccccc
Q 002995 3 DWYSGFVVGYDSESNRHHVKYVDGDEEDLIL 33 (860)
Q Consensus 3 ~~~~g~v~~~~~~~~~h~~~y~d~d~e~~~l 33 (860)
.||.|.|.+-+.. +...|.|+|+..|.+..
T Consensus 24 ~~Y~A~I~~v~~~-~~~~V~f~Dyn~e~v~~ 53 (74)
T 2equ_A 24 RYYPAKIEAINKE-GTFTVQFYDGVIRCLKR 53 (74)
T ss_dssp SEEEEEEEEESTT-SSEEEEETTSCEEEECG
T ss_pred CEEEEEEEEECCC-CEEEEEEecCCeEEecH
Confidence 6999999999876 68999999997776654
No 161
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=71.34 E-value=1.7 Score=34.80 Aligned_cols=30 Identities=30% Similarity=0.786 Sum_probs=25.5
Q ss_pred ccceecCCc----ceeeEEcCCCCcCccccchhhhh
Q 002995 509 LLCSICGVS----YGACIQCSNTTCRVAYHPLCARA 540 (860)
Q Consensus 509 ~~C~~C~~~----~Ga~iqC~~~~C~~~fH~~CA~~ 540 (860)
..|.+|+.. .+.+|.|. .|..+||..|-..
T Consensus 7 ~~C~vC~~~~~~~~~~ll~Cd--~C~~~~H~~C~~p 40 (66)
T 2yt5_A 7 GVCTICQEEYSEAPNEMVICD--KCGQGYHQLCHTP 40 (66)
T ss_dssp CCBSSSCCCCCBTTBCEEECS--SSCCEEETTTSSS
T ss_pred CCCCCCCCCCCCCCCCEEECC--CCChHHHhhhCCC
Confidence 479999974 38999998 9999999999643
No 162
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=71.21 E-value=2.4 Score=47.44 Aligned_cols=31 Identities=26% Similarity=0.269 Sum_probs=28.1
Q ss_pred eeEEEEEecccCeeEEeeecCCCCCEEEEec
Q 002995 696 KRLAFGKSGIHGFGIFAKHPHRAGDMVIEYT 726 (860)
Q Consensus 696 ~~l~v~~s~~~G~GvfA~~~i~~g~~I~ey~ 726 (860)
..|++..++++|.||+|+++|++|++|+.-.
T Consensus 7 ~~ve~~~~~~~GRgl~A~r~i~~Ge~Il~e~ 37 (433)
T 3qww_A 7 GGLERFCSAGKGRGLRALRPFHVGDLLFSCP 37 (433)
T ss_dssp TTEEEEECTTSCEEEEESSCBCTTCEEEEEE
T ss_pred CcEEEeecCCCcCeEEECCCCCCCCEEEecC
Confidence 5689999999999999999999999998643
No 163
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.08 E-value=6.1 Score=31.41 Aligned_cols=57 Identities=14% Similarity=0.046 Sum_probs=43.4
Q ss_pred CCCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCcccccc
Q 002995 78 DCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLK 146 (860)
Q Consensus 78 ~~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~ 146 (860)
....|.+|+-|+|+-.-=-.-||.|..... .....+|+|+ |+.-.|+.-++|.++..
T Consensus 6 ~~~~f~eGqdVLarWsDGlfYlGtV~kV~~-----------~~~~ClV~Fe-D~s~~wv~~kdi~~~~~ 62 (68)
T 2e5p_A 6 SGPRLWEGQDVLARWTDGLLYLGTIKKVDS-----------AREVCLVQFE-DDSQFLVLWKDISPAAL 62 (68)
T ss_dssp CCCCCCTTCEEEEECTTSSEEEEEEEEEET-----------TTTEEEEEET-TTEEEEEETTTEECCCS
T ss_pred CCcccccCCEEEEEecCCcEEEeEEEEEec-----------CCcEEEEEEc-cCCeeeeeeeccccccc
Confidence 356899999999998777778899865321 1234678877 77889999999988753
No 164
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=71.04 E-value=2.5 Score=33.71 Aligned_cols=32 Identities=19% Similarity=0.295 Sum_probs=27.9
Q ss_pred CceeeeeeeecCCCCceEEEecC-CCccccccc
Q 002995 3 DWYSGFVVGYDSESNRHHVKYVD-GDEEDLILS 34 (860)
Q Consensus 3 ~~~~g~v~~~~~~~~~h~~~y~d-~d~e~~~l~ 34 (860)
.||.+.|.+.+++.+.-.|.|.| |..|.+.++
T Consensus 24 ~wYrA~I~~v~~~~~~~~V~fvdYGn~e~V~~~ 56 (64)
T 4a4f_A 24 QCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL 56 (64)
T ss_dssp SEEEEEEEEEETTTTEEEEEETTTTEEEEEEGG
T ss_pred CEEEEEEEEEcCCCCEEEEEEEecCCEEEEeHH
Confidence 69999999999988899999999 777777664
No 165
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=70.44 E-value=2.4 Score=48.30 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=29.4
Q ss_pred ceeEEEEEecccCeeEEeeecCCCCCEEEEecC
Q 002995 695 RKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTG 727 (860)
Q Consensus 695 ~~~l~v~~s~~~G~GvfA~~~i~~g~~I~ey~G 727 (860)
-..+++..++..|+||+|+++|++|++|+.-..
T Consensus 6 ~~~v~v~~~~~~GR~lvAtr~i~~Ge~Il~e~P 38 (490)
T 3n71_A 6 MENVEVFTSEGKGRGLKATKEFWAADVIFAERA 38 (490)
T ss_dssp CTTEEEEECSSSCEEEEESSCBCTTCEEEEECC
T ss_pred CCceEEEecCCCCceEEeccCCCCCCEEEecCC
Confidence 456999999999999999999999999987544
No 166
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=69.99 E-value=5.3 Score=34.34 Aligned_cols=57 Identities=19% Similarity=0.240 Sum_probs=45.9
Q ss_pred CCCCCCCEEEEEe-cccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCcccccccc
Q 002995 80 QELEPGDIIWAKL-TGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGL 148 (860)
Q Consensus 80 ~~f~~GdlVwaK~-~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~~ 148 (860)
...++||++-|+. ..--|..|+|.... ..+.+.|.|.+-+....|+.++|.++...+
T Consensus 26 ~~~~~G~~c~a~~~~d~~wyRA~I~~~~------------~~~~~~V~fvDyGn~e~v~~~~lr~l~~~f 83 (94)
T 3fdr_A 26 LTVHVGDIVAAPLPTNGSWYRARVLGTL------------ENGNLDLYFVDFGDNGDCPLKDLRALRSDF 83 (94)
T ss_dssp CCCCTTCEEEEEETTTTEEEEEEEEEEC------------TTSCEEEEETTTCCEEEECGGGCEECCGGG
T ss_pred CCCCCCCEEEEEECCCCeEEEEEEEEEC------------CCCeEEEEEEcCCCeEEEEHHHhhhcCHHH
Confidence 4678999999998 34469999997631 123589999988999999999999998763
No 167
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=69.86 E-value=5.5 Score=31.54 Aligned_cols=54 Identities=7% Similarity=0.155 Sum_probs=41.6
Q ss_pred CCCCCCCCEEEEEecccC-CCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCcccc
Q 002995 79 CQELEPGDIIWAKLTGHA-MWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISF 144 (860)
Q Consensus 79 ~~~f~~GdlVwaK~~g~P-wWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f 144 (860)
...|++||.|.||-.|-. ..||+|.+.. .....|.|.|=. .+.-=++.++|+|.
T Consensus 7 ~~~~~vgd~VmaRW~Gd~~yYparI~Si~-----------s~~~~Y~V~fKd-gT~e~L~~kDIkp~ 61 (66)
T 2l8d_A 7 NRKYADGEVVMGRWPGSVLYYEVQVTSYD-----------DASHLYTVKYKD-GTELALKESDIRLQ 61 (66)
T ss_dssp SSSSCSSCEEEEECTTSSCEEEEEEEEEE-----------TTTTEEEEEETT-SCEEEEEGGGEECS
T ss_pred ceEeecCCEEEEEcCCCccceEEEEEEec-----------cCCceEEEEecC-CCEEeechhccccc
Confidence 467999999999986644 7899998743 223457888775 77788899999887
No 168
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=69.60 E-value=12 Score=31.58 Aligned_cols=37 Identities=27% Similarity=0.605 Sum_probs=28.4
Q ss_pred CCeeEEccccC-ceeccccccccccCCCCceeeecccCCC
Q 002995 410 NNLFLQCDKCR-MMVHARCYGELEPVNGVLWLCNLCRPGA 448 (860)
Q Consensus 410 ~n~ll~C~~C~-~~vH~~CYg~~~~~~~~~W~C~~C~~~~ 448 (860)
.-.||.|..|+ .++|..|..+.. ....|.|..|....
T Consensus 43 ~W~L~lC~~Cgs~gtH~~Cs~l~~--~~~~weC~~C~~v~ 80 (85)
T 1weq_A 43 RWRLILCATCGSHGTHRDCSSLRP--NSKKWECNECLPAS 80 (85)
T ss_dssp TTBCEECSSSCCCEECSGGGTCCT--TCSCCCCTTTSCCS
T ss_pred CEEEEeCcccCCchhHHHHhCCcC--CCCCEECCcCcccc
Confidence 35699999998 579999987543 33479999998643
No 169
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=69.43 E-value=3.5 Score=32.93 Aligned_cols=34 Identities=32% Similarity=0.452 Sum_probs=25.8
Q ss_pred CCccccccCCcccCCCeeEEccccCceecccccc
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg 429 (860)
...|++|...--.-..+-+.|..|++.+|..|..
T Consensus 23 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~ 56 (65)
T 2enz_A 23 PTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQT 56 (65)
T ss_dssp CCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTT
T ss_pred CcCchhcChhheecCCcccccCCCCCccCHhHHh
Confidence 4689999764322234568999999999999976
No 170
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=69.15 E-value=3 Score=34.67 Aligned_cols=35 Identities=31% Similarity=0.551 Sum_probs=26.1
Q ss_pred CCccccccCCcccCCCeeEEccccCceeccccccc
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGE 430 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~ 430 (860)
...|++|...--.-..+-+.|..|++.||..|...
T Consensus 34 pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 34 PTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp CEECSSSCCEECCTTCCEEECSSSCCEEESGGGSS
T ss_pred CcCccccChhhccccccccCcCCCCCcCCHhHHhh
Confidence 36899997632222345689999999999999863
No 171
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.86 E-value=4 Score=34.37 Aligned_cols=35 Identities=26% Similarity=0.479 Sum_probs=26.3
Q ss_pred CCccccccCCcccCCCeeEEccccCceeccccccc
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGE 430 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~ 430 (860)
...|++|...--.-..+-+.|..|++.||..|...
T Consensus 28 pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 28 PTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp CCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGT
T ss_pred CcChhhcChhhccccccccccCCcCCeeChhhhhh
Confidence 36899997643222345789999999999999863
No 172
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=68.55 E-value=5.8 Score=31.49 Aligned_cols=55 Identities=9% Similarity=0.202 Sum_probs=40.8
Q ss_pred CCCCCCCCEEEEEecc-cCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCccccc
Q 002995 79 CQELEPGDIIWAKLTG-HAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFL 145 (860)
Q Consensus 79 ~~~f~~GdlVwaK~~g-~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~ 145 (860)
...|++||.|.||-.| --..||+|.+.. .....|.|.|=. .+.-=++.++|+|.-
T Consensus 10 ~~~f~vgd~VmaRW~Gd~~yYparItSit-----------s~~~~Y~VkfKd-gT~e~L~~kDIKp~~ 65 (68)
T 2dig_A 10 SRKFADGEVVRGRWPGSSLYYEVEILSHD-----------STSQLYTVKYKD-GTELELKENDIKSGP 65 (68)
T ss_dssp CCSSCSSCEEEEECTTTCCEEEEEEEEEE-----------TTTTEEEEECTT-SCEEEEETTTEECCC
T ss_pred ceEeecCCEEEEEccCCccceEEEEEEec-----------cCCceEEEEecC-CCEEEechhccccCC
Confidence 4679999999999654 447899998743 223457787765 777788888888753
No 173
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=67.92 E-value=4.3 Score=37.50 Aligned_cols=59 Identities=14% Similarity=0.221 Sum_probs=43.7
Q ss_pred CCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCE--EEEeCCCcccccc
Q 002995 80 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVISFLK 146 (860)
Q Consensus 80 ~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~--awv~~~~l~~f~~ 146 (860)
..|.+|+.|+++...--|.+|.|+..... ...+...|.|.|-|-+.+ -||+..+|. |..
T Consensus 11 ~~~~vGe~v~~~~~d~~~y~AkIl~i~~~-------~~~~~~~YyVHY~gwNkR~DEWV~~~ri~-~~~ 71 (133)
T 1wgs_A 11 VTVEIGETYLCRRPDSTWHSAEVIQSRVN-------DQEGREEFYVHYVGFNRRLDEWVDKNRLA-LTK 71 (133)
T ss_dssp CCCCTTSEEEEEETTTEEEEEEEEEEEEE-------TTTTEEEEEEECTTTCSSCCEEECTTTSC-CTT
T ss_pred cccCCCCEEEEEeCCCCEEEEEEEEEEec-------cCCCceEEEEeccCcCCCceeecChhhcc-ccc
Confidence 46999999999986336889999873211 112345699999998875 899999994 544
No 174
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=67.78 E-value=2.7 Score=33.61 Aligned_cols=34 Identities=26% Similarity=0.405 Sum_probs=25.7
Q ss_pred CCccccccCCcccCCCeeEEccccCceecccccc
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg 429 (860)
...|++|...--.-...-+.|..|++.+|..|..
T Consensus 20 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~ 53 (65)
T 3uej_A 20 PTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCRE 53 (65)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHT
T ss_pred CCcccccChhhhccCceeeECCCCCCeEchhHhh
Confidence 3689999764222234578999999999999975
No 175
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=67.75 E-value=3.5 Score=33.07 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=26.1
Q ss_pred CCccccccCCcccCCCeeEEccccCceecccccc
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg 429 (860)
...|++|...--.-..+-+.|..|++.+|..|..
T Consensus 24 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~ 57 (66)
T 1y8f_A 24 PTYCYECEGLLWGIARQGMRCTECGVKCHEKCQD 57 (66)
T ss_dssp CCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHH
T ss_pred CcChhhcChhhcccCcceeEcCCCCCeeCHHHHh
Confidence 4689999764322234578999999999999976
No 176
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=67.23 E-value=2.2 Score=41.77 Aligned_cols=28 Identities=29% Similarity=0.810 Sum_probs=23.6
Q ss_pred ccceecCCcc------eeeEEcCCCCcCccccchhh
Q 002995 509 LLCSICGVSY------GACIQCSNTTCRVAYHPLCA 538 (860)
Q Consensus 509 ~~C~~C~~~~------Ga~iqC~~~~C~~~fH~~CA 538 (860)
..|.+|++.+ +.+|||. .|..|||..|.
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd--~C~~W~H~~Cv 36 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCG--KCDRWVHSKCE 36 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECT--TTCCEEEGGGS
T ss_pred CcCCCCcCccCCcccCCCeEECC--CCCcccchhcc
Confidence 3699999752 3499998 99999999998
No 177
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=67.18 E-value=4.2 Score=35.02 Aligned_cols=57 Identities=7% Similarity=0.094 Sum_probs=43.8
Q ss_pred ccCCCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCE--EEEeCCCcc
Q 002995 76 LDDCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVI 142 (860)
Q Consensus 76 ~~~~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~--awv~~~~l~ 142 (860)
..+...|.+|+.|+++- +=-|-+|.|+.... ..+...|.|.|-|-+.+ -||+..+|.
T Consensus 18 ~~~~~~~~vG~kv~v~~-~~~~y~AkIl~ir~---------~~~~~~YyVHY~g~NkRlDEWV~~~rl~ 76 (92)
T 2ro0_A 18 INSVDDIIIKCQCWVQK-NDEERLAEILSINT---------RKAPPKFYVHYVNYNKRLDEWITTDRIN 76 (92)
T ss_dssp CSCTTSCCTTCEEEEEE-TTEEEEEEEEEEEC---------SSSSCEEEEEETTSCTTSCEEEEGGGEE
T ss_pred ccccccccCCCEEEEEE-CCEEEEEEEEEEEE---------cCCCcEEEEEeCCcCcccccccCHhHcc
Confidence 34456799999999995 44688999986422 13446799999999885 899999995
No 178
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=67.04 E-value=2.3 Score=34.73 Aligned_cols=28 Identities=29% Similarity=0.831 Sum_probs=23.5
Q ss_pred cceecCC--cceeeEEcCCCCcCccccchhhh
Q 002995 510 LCSICGV--SYGACIQCSNTTCRVAYHPLCAR 539 (860)
Q Consensus 510 ~C~~C~~--~~Ga~iqC~~~~C~~~fH~~CA~ 539 (860)
.|.+|++ ..|.+|.|. .|..+||..|..
T Consensus 20 ~C~~C~~~~~~~~ll~CD--~C~~~yH~~Cl~ 49 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCD--ECDMAFHIYCLD 49 (70)
T ss_dssp SBTTTCCCSCGGGEEECT--TTCCEEEGGGSS
T ss_pred CCcCCCCcCCCCCEEEcC--CCCCceecccCC
Confidence 4678886 478999998 899999999974
No 179
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=66.72 E-value=2.5 Score=37.51 Aligned_cols=30 Identities=37% Similarity=0.794 Sum_probs=26.6
Q ss_pred ccceecCCcceeeEEcCCCCcCccccchhhh
Q 002995 509 LLCSICGVSYGACIQCSNTTCRVAYHPLCAR 539 (860)
Q Consensus 509 ~~C~~C~~~~Ga~iqC~~~~C~~~fH~~CA~ 539 (860)
..|.+|+. +|-+|.|....|..+||..|.-
T Consensus 16 ~~C~~C~~-~G~ll~CD~~~Cp~~fH~~Cl~ 45 (107)
T 4gne_A 16 DYCFQCGD-GGELVMCDKKDCPKAYHLLCLN 45 (107)
T ss_dssp SSCTTTCC-CSEEEECCSTTCCCEECTGGGT
T ss_pred CCCCcCCC-CCcEeEECCCCCCcccccccCc
Confidence 47999996 8999999988899999999974
No 180
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=66.28 E-value=4.5 Score=31.99 Aligned_cols=32 Identities=41% Similarity=0.454 Sum_probs=27.3
Q ss_pred CceeeeeeeecCCCCceEEEecCCCccccccc
Q 002995 3 DWYSGFVVGYDSESNRHHVKYVDGDEEDLILS 34 (860)
Q Consensus 3 ~~~~g~v~~~~~~~~~h~~~y~d~d~e~~~l~ 34 (860)
.+|.+.|+++|..+-...|+|-||-+|.+...
T Consensus 25 ~yYparI~Si~s~~~~Y~V~fKdgT~e~L~~k 56 (66)
T 2l8d_A 25 LYYEVQVTSYDDASHLYTVKYKDGTELALKES 56 (66)
T ss_dssp CEEEEEEEEEETTTTEEEEEETTSCEEEEEGG
T ss_pred cceEEEEEEeccCCceEEEEecCCCEEeechh
Confidence 35899999999888899999999888776553
No 181
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=65.86 E-value=4.5 Score=32.62 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=26.4
Q ss_pred CceeeeeeeecCCCCceEEEecCCCcccccc
Q 002995 3 DWYSGFVVGYDSESNRHHVKYVDGDEEDLIL 33 (860)
Q Consensus 3 ~~~~g~v~~~~~~~~~h~~~y~d~d~e~~~l 33 (860)
.||.|.|++.+.. +...|+|+||..|-+.+
T Consensus 21 ~yYpA~I~si~~~-~~Y~V~F~dG~~etvk~ 50 (67)
T 3p8d_A 21 RFYPAKVTAVNKD-GTYTVKFYDGVVQTVKH 50 (67)
T ss_dssp CEEEEEEEEECTT-SEEEEEETTSCEEEEEG
T ss_pred CEeeEEEEEECCC-CeEEEEEeCCceEEEeH
Confidence 5899999999988 56999999988887765
No 182
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=65.73 E-value=2.8 Score=34.30 Aligned_cols=31 Identities=29% Similarity=0.642 Sum_probs=25.6
Q ss_pred CccceecCCc----ceeeEEcCCCCcCccccchhhhh
Q 002995 508 KLLCSICGVS----YGACIQCSNTTCRVAYHPLCARA 540 (860)
Q Consensus 508 ~~~C~~C~~~----~Ga~iqC~~~~C~~~fH~~CA~~ 540 (860)
...|.+|+.. .+.+|.|. .|..+||..|.-.
T Consensus 16 ~~~C~vC~~~~s~~~~~ll~CD--~C~~~~H~~Cl~~ 50 (71)
T 2ku3_A 16 DAVCSICMDGESQNSNVILFCD--MCNLAVHQECYGV 50 (71)
T ss_dssp SCSCSSSCCCCCCSSSCEEECS--SSCCEEEHHHHTC
T ss_pred CCCCCCCCCCCCCCCCCEEECC--CCCCccccccCCC
Confidence 3579999874 36999998 9999999999743
No 183
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.57 E-value=2.3 Score=34.70 Aligned_cols=29 Identities=38% Similarity=0.888 Sum_probs=23.2
Q ss_pred cceecCC-cceeeEEcCCCCc-Cccccchhhh
Q 002995 510 LCSICGV-SYGACIQCSNTTC-RVAYHPLCAR 539 (860)
Q Consensus 510 ~C~~C~~-~~Ga~iqC~~~~C-~~~fH~~CA~ 539 (860)
.| +|++ ..|.||+|....| ..+||..|.-
T Consensus 8 yC-~C~~~~~g~MI~CD~cdC~~~WfH~~Cvg 38 (70)
T 1x4i_A 8 YC-ICNQVSYGEMVGCDNQDCPIEWFHYGCVG 38 (70)
T ss_dssp CS-TTSCCCCSSEECCSCTTCSCCCEEHHHHT
T ss_pred EE-EcCCCCCCCEeEeCCCCCCccCCcccccc
Confidence 45 5887 4789999996667 4899999984
No 184
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=64.97 E-value=6.5 Score=33.95 Aligned_cols=55 Identities=7% Similarity=0.067 Sum_probs=42.7
Q ss_pred CCCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCE--EEEeCCCcc
Q 002995 78 DCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVI 142 (860)
Q Consensus 78 ~~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~--awv~~~~l~ 142 (860)
+...|.+|+.|+++- +=-|-+|.|+.... ..+...|.|.|-|-+.+ -||+.++|.
T Consensus 22 ~~~~~~vG~kv~v~~-~~~~yeAeIl~ir~---------~~g~~~YYVHY~g~NkRlDEWV~~~RI~ 78 (94)
T 2rnz_A 22 SVDDIIIKCQCWVQK-NDEERLAEILSINT---------RKAPPKFYVHYVNYNKRLDEWITTDRIN 78 (94)
T ss_dssp CGGGCCTTEEEEEEC-SSCEEEEEEEEEEC---------SSSSCEEEEECTTSCSTTCEEEETTTBC
T ss_pred ccccccCCCEEEEEE-CCEEEEEEEEEEEE---------cCCCcEEEEEeCCcCcccccccCHHHcc
Confidence 345699999999995 44688899986422 13446799999999885 899999995
No 185
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=64.75 E-value=3.6 Score=38.04 Aligned_cols=67 Identities=13% Similarity=0.107 Sum_probs=46.6
Q ss_pred CCCCCCCEEEEEecccCCCceEeeCCCCcCcccccc------------------ccC-----------CCCcEEEEEeCC
Q 002995 80 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLN------------------KIS-----------GGRSIPVQFFGT 130 (860)
Q Consensus 80 ~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~------------------~~~-----------~~~~~~V~FFg~ 130 (860)
..|.+|+.|+|.-.+- |++|.|+............ ... +...|.|.|-|-
T Consensus 8 ~~f~~gekvl~~hg~l-lYeAKVl~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~VHY~GW 86 (136)
T 2k3y_A 8 QEFALGGRVLAFHGPL-MYEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKSFFIHYQGW 86 (136)
T ss_dssp GSCCTTSEEEEECSSC-EEEEEEEEEEETTTTEEEECSSCCCTTCSCCCSSBCCCCSCSSCCCCHHHHTSCEEEECCTTS
T ss_pred cccCCCCEEEEEECCe-eEEEEEEEEEeccccccccccccccccccccccccccccccccccCcccccccceEEEEeCCc
Confidence 3699999999998544 9999998754310000000 000 122799999998
Q ss_pred CCE--EEEeCCCccccccc
Q 002995 131 HDF--ARINVKQVISFLKG 147 (860)
Q Consensus 131 ~~~--awv~~~~l~~f~~~ 147 (860)
+.. -||+.++|..|++.
T Consensus 87 n~rwDEWV~~dRil~~~ee 105 (136)
T 2k3y_A 87 KSSWDEWVGYDRIRAYNEE 105 (136)
T ss_dssp CGGGCEEEETTTEEESCHH
T ss_pred CCcceeeecHhhhhhCCHh
Confidence 874 89999999999975
No 186
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=63.68 E-value=3.1 Score=35.54 Aligned_cols=30 Identities=30% Similarity=0.658 Sum_probs=25.1
Q ss_pred ccceecCCc----ceeeEEcCCCCcCccccchhhhh
Q 002995 509 LLCSICGVS----YGACIQCSNTTCRVAYHPLCARA 540 (860)
Q Consensus 509 ~~C~~C~~~----~Ga~iqC~~~~C~~~fH~~CA~~ 540 (860)
..|.+|+.. .+.+|.|. .|..+||..|--.
T Consensus 26 ~~C~vC~~~~s~~~~~ll~CD--~C~~~fH~~Cl~p 59 (88)
T 2l43_A 26 AVCSICMDGESQNSNVILFCD--MCNLAVHQECYGV 59 (88)
T ss_dssp CCCSSCCSSSSCSEEEEEECS--SSCCCCCHHHHTC
T ss_pred CcCCcCCCCCCCCCCCEEECC--CCCchhhcccCCC
Confidence 579999973 24999998 8999999999743
No 187
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=63.32 E-value=4 Score=32.29 Aligned_cols=32 Identities=28% Similarity=0.732 Sum_probs=25.2
Q ss_pred CccccccCCcccCCCeeEEccccCceecccccc
Q 002995 397 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 397 ~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg 429 (860)
..|++|...-. -...-+.|..|++.+|..|-.
T Consensus 20 ~~C~~Cg~~i~-~gkq~~kC~dC~~~cH~~C~~ 51 (61)
T 4b6d_A 20 ESCVPCGKRIK-FGKLSLKCRDCRVVSHPECRD 51 (61)
T ss_dssp EECTTTCCEEC-TTCEEEEESSSSCEECGGGGG
T ss_pred cccccccCEEE-EeeEeeECCCCCCeEchhHhh
Confidence 68999965332 335679999999999999964
No 188
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=63.17 E-value=5.2 Score=34.14 Aligned_cols=33 Identities=24% Similarity=0.343 Sum_probs=28.0
Q ss_pred CceeeeeeeecCCCCceEEEecC-CCcccccccc
Q 002995 3 DWYSGFVVGYDSESNRHHVKYVD-GDEEDLILSN 35 (860)
Q Consensus 3 ~~~~g~v~~~~~~~~~h~~~y~d-~d~e~~~l~~ 35 (860)
.||.+.|.+.++..+...|.|.| |..|.+.+++
T Consensus 26 ~wYrA~I~~i~~~~~~~~V~fiDYGN~E~V~~~~ 59 (88)
T 1g5v_A 26 CIYPATIASIDFKRETCVVVYTGYGNREEQNLSD 59 (88)
T ss_dssp CEEEEEEEEEETTTTEEEEEETTTCCEEEEEGGG
T ss_pred CEEEEEEEEecCCCCEEEEEEecCCCEEEEcHHH
Confidence 69999999999988999999998 6777766643
No 189
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=63.13 E-value=2.6 Score=35.95 Aligned_cols=29 Identities=24% Similarity=0.770 Sum_probs=25.3
Q ss_pred ccceecCCcceeeEEcCCCCcCccccchhhhh
Q 002995 509 LLCSICGVSYGACIQCSNTTCRVAYHPLCARA 540 (860)
Q Consensus 509 ~~C~~C~~~~Ga~iqC~~~~C~~~fH~~CA~~ 540 (860)
..|.+|+. .|-.|-|. .|...||..|-..
T Consensus 26 ~~C~vC~~-~g~LL~CD--~C~~~fH~~Cl~P 54 (88)
T 1fp0_A 26 TICRVCQK-PGDLVMCN--QCEFCFHLDCHLP 54 (88)
T ss_dssp SCCSSSCS-SSCCEECT--TSSCEECTTSSST
T ss_pred CcCcCcCC-CCCEEECC--CCCCceecccCCC
Confidence 47999998 68899998 9999999999743
No 190
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=63.08 E-value=3.8 Score=30.97 Aligned_cols=31 Identities=23% Similarity=0.566 Sum_probs=24.8
Q ss_pred CCccccccCCcccCCCeeEEccccCceeccccccc
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGE 430 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~ 430 (860)
...|++|...- + +-+.|..|++.+|..|...
T Consensus 14 pt~C~~C~~~l-~---qG~~C~~C~~~~H~~C~~~ 44 (52)
T 1faq_A 14 LAFCDICQKFL-L---NGFRCQTCGYKFHEHCSTK 44 (52)
T ss_dssp CEECTTSSSEE-C---SEEECTTTTCCBCSTTSSS
T ss_pred CcCCCCccccc-c---cCCEeCCCCCeEChhHHhh
Confidence 36899997642 2 4689999999999999763
No 191
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=62.91 E-value=3.1 Score=35.53 Aligned_cols=30 Identities=27% Similarity=0.730 Sum_probs=25.4
Q ss_pred CccceecCCc----ceeeEEcCCCCcCccccchhhh
Q 002995 508 KLLCSICGVS----YGACIQCSNTTCRVAYHPLCAR 539 (860)
Q Consensus 508 ~~~C~~C~~~----~Ga~iqC~~~~C~~~fH~~CA~ 539 (860)
...|.+|+.. .+.+|.|. .|...||..|-.
T Consensus 16 ~~~C~vC~~~~~~~~~~ll~CD--~C~~~yH~~Cl~ 49 (88)
T 1wev_A 16 GLACVVCRQMTVASGNQLVECQ--ECHNLYHQDCHK 49 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECS--SSCCEEETTTSS
T ss_pred CCcCCCCCCCCCCCCCceEECC--CCCCeEcCccCC
Confidence 4579999985 37899998 899999999953
No 192
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=62.82 E-value=9.1 Score=33.88 Aligned_cols=56 Identities=18% Similarity=0.206 Sum_probs=45.5
Q ss_pred CCCCCCCEEEEEec-ccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCccccccc
Q 002995 80 QELEPGDIIWAKLT-GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKG 147 (860)
Q Consensus 80 ~~f~~GdlVwaK~~-g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~ 147 (860)
..+++||+|-|+.. .--|..|+|..... .+.+.|+|.+-.....|+.++|+++...
T Consensus 31 ~~~~~G~~c~a~~~~d~~wyRA~V~~~~~------------~~~~~V~fvDyGn~e~v~~~~Lr~l~~~ 87 (110)
T 2diq_A 31 LTVHVGDIVAAPLPTNGSWYRARVLGTLE------------NGNLDLYFVDFGDNGDCPLKDLRALRSD 87 (110)
T ss_dssp CCCCTTCEEEECCTTTCSCEEEEECCCCS------------SSCEEEEETTTCCEEEECGGGCEECCHH
T ss_pred CCCCCCCEEEEEECCCCeEEEEEEEEECC------------CCeEEEEEEeCCCeEEEehHHhhcCcHH
Confidence 46789999999984 45799999976321 2458999998899999999999999765
No 193
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=62.79 E-value=4.8 Score=33.48 Aligned_cols=33 Identities=33% Similarity=0.523 Sum_probs=29.1
Q ss_pred CceeeeeeeecCCCCceEEEecC-CCcccccccc
Q 002995 3 DWYSGFVVGYDSESNRHHVKYVD-GDEEDLILSN 35 (860)
Q Consensus 3 ~~~~g~v~~~~~~~~~h~~~y~d-~d~e~~~l~~ 35 (860)
.||-+.|.+.+...+.-.|.|.| |..|.+.+++
T Consensus 25 ~wYRA~I~~i~~~~~~~~V~fiDYGN~e~V~~~~ 58 (78)
T 2d9t_A 25 KFYRAEVEALHSSGMTAVVKFTDYGNYEEVLLSN 58 (78)
T ss_dssp CEEEEEEEEECSSSSEEEEEETTTTEEEEEEGGG
T ss_pred CEEEEEEEEEeCCCCEEEEEEEcCCCeEEEcHHH
Confidence 69999999999877899999999 8888887753
No 194
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.29 E-value=2.8 Score=34.86 Aligned_cols=28 Identities=36% Similarity=0.880 Sum_probs=24.2
Q ss_pred cceecCC--cceeeEEcCCCCcCccccchhhh
Q 002995 510 LCSICGV--SYGACIQCSNTTCRVAYHPLCAR 539 (860)
Q Consensus 510 ~C~~C~~--~~Ga~iqC~~~~C~~~fH~~CA~ 539 (860)
.|.+|++ ..|.+|.|. .|..+||..|..
T Consensus 28 ~C~vC~~~~~~~~ll~CD--~C~~~yH~~Cl~ 57 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCD--ECNVAYHIYCLN 57 (77)
T ss_dssp SCSSSCCCCCSTTEEECS--SSCCEEETTSSS
T ss_pred CCcCcCCcCCCCCEEEcC--CCCccccccccC
Confidence 5889986 378999998 999999999974
No 195
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.99 E-value=5.9 Score=33.48 Aligned_cols=34 Identities=26% Similarity=0.392 Sum_probs=26.0
Q ss_pred CCccccccCCcccCCCeeEEccccCceecccccc
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg 429 (860)
...|++|...--.-..+-+.|..|++.||..|..
T Consensus 28 pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~ 61 (85)
T 2eli_A 28 PTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVI 61 (85)
T ss_dssp CCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTT
T ss_pred CcCCcccCccccccccCCCcCCCcCCccCHhHHh
Confidence 4689999764322234578999999999999976
No 196
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=61.56 E-value=3.1 Score=40.21 Aligned_cols=27 Identities=11% Similarity=0.028 Sum_probs=19.8
Q ss_pred ceecCCc---ceeeEEcCCCCcCccccchhhh
Q 002995 511 CSICGVS---YGACIQCSNTTCRVAYHPLCAR 539 (860)
Q Consensus 511 C~~C~~~---~Ga~iqC~~~~C~~~fH~~CA~ 539 (860)
-++|+.. .-.++||. +|.++||..|-+
T Consensus 7 yCYCG~~~~~~~~mLqC~--~C~qWFH~~Cl~ 36 (177)
T 3rsn_A 7 SVDEENGRQLGEVELQCG--ICTKWFTADTFG 36 (177)
T ss_dssp ----CTTCCTTSCEEECT--TTCCEEEGGGGT
T ss_pred EEEcCCCCCCCceeEeec--cccceecHHHhc
Confidence 4688873 44799999 899999999986
No 197
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=61.45 E-value=5.9 Score=32.88 Aligned_cols=33 Identities=33% Similarity=0.554 Sum_probs=28.8
Q ss_pred CceeeeeeeecCCCCceEEEecC-CCcccccccc
Q 002995 3 DWYSGFVVGYDSESNRHHVKYVD-GDEEDLILSN 35 (860)
Q Consensus 3 ~~~~g~v~~~~~~~~~h~~~y~d-~d~e~~~l~~ 35 (860)
.||.+.|.+.+...+.-.|.|.| |..|.+.+++
T Consensus 33 ~wYRA~I~~i~~~~~~~~V~fvDYGN~e~V~~~~ 66 (77)
T 3pnw_C 33 KFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSN 66 (77)
T ss_dssp EEEEEEEEEECTTSSEEEEEETTTCCEEEEEGGG
T ss_pred CEEEEEEEEEeCCCCEEEEEEEcCCCeEEEeHHH
Confidence 59999999999888889999999 8888877754
No 198
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=60.89 E-value=5.5 Score=44.45 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=27.7
Q ss_pred ceeEEEEEecccCeeEEeeecCCCCCEEEEec
Q 002995 695 RKRLAFGKSGIHGFGIFAKHPHRAGDMVIEYT 726 (860)
Q Consensus 695 ~~~l~v~~s~~~G~GvfA~~~i~~g~~I~ey~ 726 (860)
...++...+++.|+||+|+++|++|++|+.-.
T Consensus 4 ~~~i~~~~~~~~GR~l~Atr~i~~Ge~Il~e~ 35 (429)
T 3qwp_A 4 PLKVEKFATANRGNGLRAVTPLRPGELLFRSD 35 (429)
T ss_dssp CCSEEEEECSSSSEEEEESSCBCTTCEEEEEC
T ss_pred ccceeecccCCCCCeEEeCCCCCCCCEEEecC
Confidence 45677888999999999999999999998733
No 199
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=65.11 E-value=1.8 Score=36.38 Aligned_cols=31 Identities=19% Similarity=0.313 Sum_probs=26.3
Q ss_pred CceeeeeeeecCCCCceEEEecCCCccccccc
Q 002995 3 DWYSGFVVGYDSESNRHHVKYVDGDEEDLILS 34 (860)
Q Consensus 3 ~~~~g~v~~~~~~~~~h~~~y~d~d~e~~~l~ 34 (860)
.||.+.|.+.+.. +...|.|+||..|.+.++
T Consensus 21 ~wY~A~I~~v~~~-~~y~V~F~DGn~E~V~~s 51 (81)
T 2ldm_A 21 RFYPAKVTAVNKD-GTYTVKFYDGVVQTVKHI 51 (81)
Confidence 6999999999854 479999999888887764
No 200
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=60.82 E-value=5 Score=32.85 Aligned_cols=32 Identities=22% Similarity=0.637 Sum_probs=25.8
Q ss_pred CCCccccccCCcccCCCeeEEccccCceecccccc
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg 429 (860)
....|+.|..-- ...-+.|..|++.+|..|..
T Consensus 34 ~pt~C~~C~~~l---~~qG~kC~~C~~~cHkkC~~ 65 (72)
T 2fnf_X 34 GPGWCDLCGREV---LRQALRCANCKFTCHSECRS 65 (72)
T ss_dssp SCCBCTTTSSBC---SSCCEECTTSSCEECTGGGG
T ss_pred CCcchhhhhHHH---HhCcCccCCCCCeechhhhc
Confidence 346899997654 34568999999999999985
No 201
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=60.34 E-value=6.6 Score=31.16 Aligned_cols=32 Identities=34% Similarity=0.381 Sum_probs=27.4
Q ss_pred CceeeeeeeecCCCCceEEEecCCCccccccc
Q 002995 3 DWYSGFVVGYDSESNRHHVKYVDGDEEDLILS 34 (860)
Q Consensus 3 ~~~~g~v~~~~~~~~~h~~~y~d~d~e~~~l~ 34 (860)
.+|.+.|+++|...-...|+|-||-+|.|...
T Consensus 28 ~yYparItSits~~~~Y~VkfKdgT~e~L~~k 59 (68)
T 2dig_A 28 LYYEVEILSHDSTSQLYTVKYKDGTELELKEN 59 (68)
T ss_dssp CEEEEEEEEEETTTTEEEEECTTSCEEEEETT
T ss_pred cceEEEEEEeccCCceEEEEecCCCEEEechh
Confidence 46999999999888899999999888776553
No 202
>3e9g_A Chromatin modification-related protein EAF3; chromatin remodeling, chromo domain, transcription factor, transcription regulation; 2.50A {Saccharomyces cerevisiae} PDB: 2k3x_A 3e9f_A*
Probab=60.23 E-value=11 Score=34.10 Aligned_cols=67 Identities=12% Similarity=0.076 Sum_probs=45.6
Q ss_pred CCCCCCCEEEEEecccCCCceEeeCCCCcCcccc-----------------------------ccccCCCCcEEEEEeCC
Q 002995 80 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKG-----------------------------LNKISGGRSIPVQFFGT 130 (860)
Q Consensus 80 ~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~-----------------------------~~~~~~~~~~~V~FFg~ 130 (860)
..|++|+.|.+--++-+ -.|+|+.......... .......-.|.|.|.|-
T Consensus 6 p~f~~gE~VlcfHg~~~-YeAKIl~i~d~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~VHY~GW 84 (130)
T 3e9g_A 6 QEFALGGRCLAFHGPLM-YEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKCFFIHYQGW 84 (130)
T ss_dssp -CCCTTCEEEEEETTEE-EEEEEEEEEETTTTEEEECC--------------CCBCCCTTCCCCTTTTTSCEEEEEETTS
T ss_pred ccccCCCEEEEEeCCcc-eeeEEEEeeCCCcceeecccccccccccccccccccccccccccCchhhccCceEEEEeCCC
Confidence 36999999999888774 6788876521111000 00112234699999998
Q ss_pred CCE--EEEeCCCccccccc
Q 002995 131 HDF--ARINVKQVISFLKG 147 (860)
Q Consensus 131 ~~~--awv~~~~l~~f~~~ 147 (860)
+.. -||+.++|..|.+.
T Consensus 85 n~~WDEWV~e~rvlk~~ee 103 (130)
T 3e9g_A 85 KSSWDEWVGYDRIRAYNEE 103 (130)
T ss_dssp CGGGCEEEETTTEECSSHH
T ss_pred CCChhhccCHhhhhccCHH
Confidence 874 89999999999875
No 203
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=60.13 E-value=6.3 Score=33.24 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=26.3
Q ss_pred CceeeeeeeecCCCCceEEEecCCCcccccc
Q 002995 3 DWYSGFVVGYDSESNRHHVKYVDGDEEDLIL 33 (860)
Q Consensus 3 ~~~~g~v~~~~~~~~~h~~~y~d~d~e~~~l 33 (860)
.||.|.|++.+.. ....|+|+||..|-+.+
T Consensus 36 ~yYPAkI~sV~~~-~~YtV~F~DG~~etvk~ 65 (85)
T 3qii_A 36 RFYPAKVTAVNKD-GTYTVKFYDGVVQTVKH 65 (85)
T ss_dssp CEEEEEEEEECTT-SEEEEEETTSCEEEEEG
T ss_pred CEeeEEEEEECCC-CeEEEEEeCCCeEEecH
Confidence 6899999999988 56999999988887765
No 204
>3mp6_A MBP, SGF29, maltose-binding periplasmic protein, linker, SAGA associated factor 29; histone, tudor domain, histone binding protei; HET: MLY MAL; 1.48A {Escherichia coli} PDB: 3mp1_A* 3mp8_A*
Probab=59.74 E-value=20 Score=40.79 Aligned_cols=105 Identities=17% Similarity=0.271 Sum_probs=65.8
Q ss_pred CCceeeeeeeecCCCCceEEEecCCCccccccccceEEEEEccchhhhhhcccCCCCCCCCCCChhhHHHhhcCccCCCC
Q 002995 2 QDWYSGFVVGYDSESNRHHVKYVDGDEEDLILSNERIKFYISQEEMDCLKLSFSINNVDNDGYDYDEMVVLAASLDDCQE 81 (860)
Q Consensus 2 ~~~~~g~v~~~~~~~~~h~~~y~d~d~e~~~l~~e~i~~~~s~~e~~~l~~~~~~~~~~~~~~~~de~~~~~~~~~~~~~ 81 (860)
..|.-+.|++|++++++..|.=.|-|++ .+++.+..++...+-.|-. ......
T Consensus 405 ~~wi~~~~~~~~~~~~~y~v~d~~~~~~----~~~~~~~~~~~~~~~~~p~-----------------------~~~~~~ 457 (522)
T 3mp6_A 405 GEWIQCEVLKVVADGTRFEVRDPEPDEL----GNSGKVYKCNRKELLLIPP-----------------------GFPTKN 457 (522)
T ss_dssp CCEEEEEEEEEETTTTEEEEEECSCBTT----BTTCEEEEECGGGEEEECS-----------------------SCCCCC
T ss_pred CCEEEEEEEEEeCCCCEEEEeCCCCCCC----CCCCeeEEccHHHEEECCC-----------------------CCcccC
Confidence 4799999999999999888876655544 2333455555444433320 011256
Q ss_pred CCCCCEEEEEecc-cCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCC---EEEEeCCCccccc
Q 002995 82 LEPGDIIWAKLTG-HAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHD---FARINVKQVISFL 145 (860)
Q Consensus 82 f~~GdlVwaK~~g-~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~---~awv~~~~l~~f~ 145 (860)
|..|+.|+|-... --.-||.|+... ..+.|.|+|=|+.+ ..-|+.+-+.++-
T Consensus 458 ~~~~~~v~a~~p~tt~fy~a~v~~~~------------~~~~~~~~f~~~~~~~~~~~~~~~~v~~~~ 513 (522)
T 3mp6_A 458 YPPGTKVLARYPETTTFYPAIVIGTK------------RDGTCRLRFDGEEEVDKETEVTRRLVLPSP 513 (522)
T ss_dssp CCTTCEEEEECTTCSEEEEEEEEEEC------------TTSCEEEEETTC----CCEEECGGGEEECH
T ss_pred CCCCCEEEEECCCCcceEeEEEecCC------------CCCeEEEEecCCCCCCccccccceeEEecC
Confidence 9999999998532 225678886621 12459999999874 3455555555543
No 205
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.74 E-value=3.1 Score=35.85 Aligned_cols=29 Identities=24% Similarity=0.732 Sum_probs=24.3
Q ss_pred ccceecCCcc--eeeEEcCCCCcCccccchhhh
Q 002995 509 LLCSICGVSY--GACIQCSNTTCRVAYHPLCAR 539 (860)
Q Consensus 509 ~~C~~C~~~~--Ga~iqC~~~~C~~~fH~~CA~ 539 (860)
..|.+|+... +.+|.|. .|..+||..|..
T Consensus 17 ~~C~vC~~~~~~~~ll~CD--~C~~~~H~~Cl~ 47 (92)
T 2e6r_A 17 YICQVCSRGDEDDKLLFCD--GCDDNYHIFCLL 47 (92)
T ss_dssp CCCSSSCCSGGGGGCEECT--TTCCEECSSSSS
T ss_pred CCCccCCCcCCCCCEEEcC--CCCchhccccCC
Confidence 3699999843 4799998 899999999984
No 206
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=58.17 E-value=7.1 Score=37.74 Aligned_cols=44 Identities=20% Similarity=0.391 Sum_probs=29.2
Q ss_pred ccCCcccCCCeeEEccccCceeccccccccc---cC--CCCceeeecccC
Q 002995 402 CHMDEEYQNNLFLQCDKCRMMVHARCYGELE---PV--NGVLWLCNLCRP 446 (860)
Q Consensus 402 C~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~---~~--~~~~W~C~~C~~ 446 (860)
|+.+.+. +-.+|+|++|..-||..|.+... .+ ....+.|..|..
T Consensus 10 CG~~~~~-~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~ 58 (177)
T 3rsn_A 10 EENGRQL-GEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHH 58 (177)
T ss_dssp -CTTCCT-TSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTST
T ss_pred cCCCCCC-CceeEeeccccceecHHHhcccccCccccceeEEEEccccCC
Confidence 6665544 45799999999999999997432 11 123466766654
No 207
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.07 E-value=2.4 Score=34.89 Aligned_cols=35 Identities=26% Similarity=0.579 Sum_probs=25.8
Q ss_pred CCccccccCCcccCCCeeEEccccCceeccccccc
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGE 430 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~ 430 (860)
...|++|..---.-..+-+.|..|++.||..|...
T Consensus 28 pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 62 (74)
T 2db6_A 28 PKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSY 62 (74)
T ss_dssp CEECSSSCCEECHHHHEEEEESSSCCEECTTTTGG
T ss_pred CcCchhcChhhccccCCccccCCCCCccChhHHhh
Confidence 46899997632111235689999999999999863
No 208
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=56.22 E-value=2.9 Score=34.95 Aligned_cols=34 Identities=26% Similarity=0.725 Sum_probs=29.4
Q ss_pred ccceecCC-cceeeEEcCCCCcCccccchhhhhcCee
Q 002995 509 LLCSICGV-SYGACIQCSNTTCRVAYHPLCARAAGLC 544 (860)
Q Consensus 509 ~~C~~C~~-~~Ga~iqC~~~~C~~~fH~~CA~~~g~~ 544 (860)
-.|.+|.+ ..+..+.|. -|.+.||..|-++.|+.
T Consensus 16 ~~C~VC~~~t~~~l~pCR--vC~RvfH~~CL~r~gy~ 50 (89)
T 1wil_A 16 EMCDVCEVWTAESLFPCR--VCTRVFHDGCLRRMGYI 50 (89)
T ss_dssp CCCTTTCCCCSSCCSSCS--SSSSCCCHHHHHHHTSC
T ss_pred cccCccccccccceeccc--cccccccHhhccccccc
Confidence 36999996 467888997 89999999999999984
No 209
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=55.46 E-value=4.1 Score=43.60 Aligned_cols=35 Identities=26% Similarity=0.606 Sum_probs=26.4
Q ss_pred CCCccccccCCccc-CCCeeEEcc--ccCceecccccc
Q 002995 395 DLDKCSVCHMDEEY-QNNLFLQCD--KCRMMVHARCYG 429 (860)
Q Consensus 395 ~~~~C~vC~~~~~~-~~n~ll~C~--~C~~~vH~~CYg 429 (860)
....|.||.+.... +.=+...|+ .|+..+|..|.-
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~ 344 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLE 344 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGH
T ss_pred CCccCcccceeecCCCCCccccccCCccCCccchHHHH
Confidence 45689999986554 223346798 899999999973
No 210
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=55.16 E-value=3.9 Score=48.54 Aligned_cols=34 Identities=29% Similarity=0.420 Sum_probs=0.0
Q ss_pred CCccccccCCcccCCCeeEEccccCceecccccc
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg 429 (860)
...|++|..---.-...=+.|..|++.||..|..
T Consensus 48 p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~ 81 (674)
T 3pfq_A 48 PTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHE 81 (674)
T ss_dssp ----------------------------------
T ss_pred CCccccccccccccCCceeECCCCCCCcChhhcC
Confidence 3689999763211123357899999999999974
No 211
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=54.69 E-value=3.9 Score=39.97 Aligned_cols=27 Identities=26% Similarity=0.728 Sum_probs=23.7
Q ss_pred ccceecCCcceeeEEcCCCCcCccccchhh
Q 002995 509 LLCSICGVSYGACIQCSNTTCRVAYHPLCA 538 (860)
Q Consensus 509 ~~C~~C~~~~Ga~iqC~~~~C~~~fH~~CA 538 (860)
..|.+|+. .|-.|-|. .|..+||..|-
T Consensus 5 ~~C~~C~~-~g~ll~Cd--~C~~~~H~~C~ 31 (184)
T 3o36_A 5 DWCAVCQN-GGELLCCE--KCPKVFHLSCH 31 (184)
T ss_dssp SSCTTTCC-CSSCEECS--SSSCEECTTTS
T ss_pred CccccCCC-CCeeeecC--CCCcccCcccc
Confidence 36999997 68899998 89999999995
No 212
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=54.63 E-value=4.7 Score=40.23 Aligned_cols=28 Identities=25% Similarity=0.685 Sum_probs=24.4
Q ss_pred ccceecCCcceeeEEcCCCCcCccccchhhh
Q 002995 509 LLCSICGVSYGACIQCSNTTCRVAYHPLCAR 539 (860)
Q Consensus 509 ~~C~~C~~~~Ga~iqC~~~~C~~~fH~~CA~ 539 (860)
..|.+|+. .|-.|-|. .|..+||..|..
T Consensus 8 ~~C~~C~~-~g~ll~Cd--~C~~~~H~~Cl~ 35 (207)
T 3u5n_A 8 DWCAVCQN-GGDLLCCE--KCPKVFHLTCHV 35 (207)
T ss_dssp SSBTTTCC-CEEEEECS--SSSCEECTTTSS
T ss_pred CCCCCCCC-CCceEEcC--CCCCccCCccCC
Confidence 36999997 68899998 899999999963
No 213
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=54.48 E-value=6.4 Score=33.25 Aligned_cols=34 Identities=29% Similarity=0.578 Sum_probs=24.8
Q ss_pred CccccccCC-cccCCCeeEEccccCceeccccccc
Q 002995 397 DKCSVCHMD-EEYQNNLFLQCDKCRMMVHARCYGE 430 (860)
Q Consensus 397 ~~C~vC~~~-~~~~~n~ll~C~~C~~~vH~~CYg~ 430 (860)
.+|.||... .....=.-+.|.-|++.||..|+..
T Consensus 39 s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~~ 73 (84)
T 1r79_A 39 AKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKES 73 (84)
T ss_dssp CBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHH
T ss_pred CEeCCCCCEeCCccCCCCCCCcccChhHHHHHHHh
Confidence 589999764 1222223568999999999999863
No 214
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=53.83 E-value=20 Score=28.89 Aligned_cols=52 Identities=13% Similarity=0.120 Sum_probs=39.6
Q ss_pred CCCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCC-E-EEEeCCC
Q 002995 78 DCQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHD-F-ARINVKQ 140 (860)
Q Consensus 78 ~~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~-~-awv~~~~ 140 (860)
....|++|.-|=|.-..-||+||.|...+. ..+.++|.|-|... + -|++.++
T Consensus 9 ~~~~F~vGmkLEa~d~~~p~~~AtV~~v~~-----------~~~~~~VhfdGw~~~~D~W~~~dS 62 (69)
T 3sd4_A 9 RGISFEVGAQLEARDRLKNWYPAHIEDIDY-----------EEGKVLIHFKRWNHRYDEWFCWDS 62 (69)
T ss_dssp TTCCCSTTCEEEEECTTSCEEEEEEEEEET-----------TTTEEEEEETTSCGGGCEEEETTC
T ss_pred CCCCcCCCCEEEEEECCCCccccEEEEEec-----------cCCEEEEEeCCCCCCCCEEEcCCC
Confidence 456899999999998888999999976311 12458999998655 3 6998764
No 215
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=53.45 E-value=3.5 Score=46.13 Aligned_cols=27 Identities=22% Similarity=0.659 Sum_probs=23.6
Q ss_pred cceecCCc---ceeeEEcCCCCcCccccchhh
Q 002995 510 LCSICGVS---YGACIQCSNTTCRVAYHPLCA 538 (860)
Q Consensus 510 ~C~~C~~~---~Ga~iqC~~~~C~~~fH~~CA 538 (860)
.+++|+++ .|.+|||. .|..|||..|.
T Consensus 6 ~yCiC~~~~d~~~~MIqCD--~C~~WfH~~CV 35 (447)
T 3kv4_A 6 VYCLCRLPYDVTRFMIECD--MCQDWFHGSCV 35 (447)
T ss_dssp EETTTTEECCTTSCEEECT--TTCCEEEHHHH
T ss_pred eEEeCCCcCCCCCCeEEcC--CCCcccccccC
Confidence 45699985 48999999 89999999998
No 216
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=53.35 E-value=54 Score=31.70 Aligned_cols=110 Identities=17% Similarity=0.231 Sum_probs=63.1
Q ss_pred CCceeeeeeeecCCCCceEEEecCCCccccccccceEEEEEccchhhhhhcccCCCCCCCCCCChhhHHHhhcCccCCCC
Q 002995 2 QDWYSGFVVGYDSESNRHHVKYVDGDEEDLILSNERIKFYISQEEMDCLKLSFSINNVDNDGYDYDEMVVLAASLDDCQE 81 (860)
Q Consensus 2 ~~~~~g~v~~~~~~~~~h~~~y~d~d~e~~~l~~e~i~~~~s~~e~~~l~~~~~~~~~~~~~~~~de~~~~~~~~~~~~~ 81 (860)
+.|.-+.|++|+..+++..|.=.| +| .. -++.++...+--|-.... +. .......
T Consensus 62 ~~WILa~Vv~~~~~~~rYeV~D~d--~e----g~--~~~~~s~~~IIPLP~~~a--~p---------------~t~~~~~ 116 (180)
T 3mea_A 62 EQWILAEVVSYSHATNKYEVDDID--EE----GK--ERHTLSRRRVIPLPQWKA--NP---------------ETDPEAL 116 (180)
T ss_dssp EEEEEEEEEEEETTTTEEEEEECC--TT----CC--EEEEEEGGGEEECCSBBC--CT---------------TTCGGGS
T ss_pred ccEEEEEEEEEcCCCCEEEEecCC--CC----Cc--eeEEeCHHHEEECCCcCC--Cc---------------ccCcccc
Confidence 369999999999988887775444 33 12 244444433333221110 00 0011245
Q ss_pred CCCCCEEEEEec-ccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCC---E---EEEeCCCcccccc
Q 002995 82 LEPGDIIWAKLT-GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHD---F---ARINVKQVISFLK 146 (860)
Q Consensus 82 f~~GdlVwaK~~-g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~---~---awv~~~~l~~f~~ 146 (860)
|..|+.|+|..- .--.-||.|+..+. ...+.|.|.|=|+.+ + --|+..-+.+|.+
T Consensus 117 f~~G~~VLAlYP~TT~FY~A~V~~~p~----------~~~~~y~L~FEdde~~dG~sp~~~V~~RyVv~~ke 178 (180)
T 3mea_A 117 FQKEQLVLALYPQTTCFYRALIHAPPQ----------RPQDDYSVLFEDTSYADGYSPPLNVAQRYVVACKE 178 (180)
T ss_dssp CCTTCEEEEECTTSSEEEEEEEEECCS----------STTCCEEEEEBCTTSTTSBCCCEEECGGGEEEC--
T ss_pred CCCCCEEEEeCCCCceeeEEEEecCCC----------CCCCcEEEEEcCCCccCCCCCCcEecceEEEccCC
Confidence 999999999963 33367899977421 233579999887742 2 3455555555544
No 217
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=52.61 E-value=15 Score=36.37 Aligned_cols=116 Identities=16% Similarity=0.181 Sum_probs=69.6
Q ss_pred CCceeeeeeeecCCCC--ceEEEecCCCccccccccceEEEEEccchhhhhhcccCCCCCCCCCCCh--hh-HHHhhcCc
Q 002995 2 QDWYSGFVVGYDSESN--RHHVKYVDGDEEDLILSNERIKFYISQEEMDCLKLSFSINNVDNDGYDY--DE-MVVLAASL 76 (860)
Q Consensus 2 ~~~~~g~v~~~~~~~~--~h~~~y~d~d~e~~~l~~e~i~~~~s~~e~~~l~~~~~~~~~~~~~~~~--de-~~~~~~~~ 76 (860)
...|.|.|..=....+ ++.|-+|||....+.+.+=++-..-|.. . ..+..+. -+ +...-.++
T Consensus 85 ~~fY~GiVaE~p~~~N~~RyLVFFDDG~~~Yv~~~~V~~Vc~~s~~---v----------W~di~~~~~r~FIk~YL~~y 151 (213)
T 3dlm_A 85 VWLYAGIVAETPNVKNKLRFLIFFDDGYASYVTQSELYPICRPLKK---T----------WEDIEDISCRDFIEEYVTAY 151 (213)
T ss_dssp EEEEEEEEEECCCTTTTSCEEEEETTSCEEEECGGGEEEBSSCCSS---G----------GGGCSCHHHHHHHHHHHHHT
T ss_pred cceeeeEEEECCccCCCceEEEEEeCCCcceecCceEEEEEEcccc---h----------hhhcCcchhHHHHHHHHHhC
Confidence 3579999987766555 8899999999999988543222111111 1 1011110 00 11111111
Q ss_pred cC--CCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCC--Ccccc
Q 002995 77 DD--CQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVK--QVISF 144 (860)
Q Consensus 77 ~~--~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~--~l~~f 144 (860)
.+ .-.+++|+.+-.-..|. ||=|.|...+ ..-+.|+|-++...-||-.- +|.|+
T Consensus 152 P~rpmv~~~~GQ~i~~E~~g~-w~~~~V~~vD-------------~SLv~v~f~~dkr~EWIYRGS~Rl~pl 209 (213)
T 3dlm_A 152 PNRPMVLLKSGQLIKTEWEGT-WWKSRVEEVD-------------GSLVRILFLDDKRCEWIYRGSTRLEPM 209 (213)
T ss_dssp TCCCCCCCCTTCEEEEEETTE-EEEEEEEEEE-------------TTEEEEEETTTTEEEEEETTCTTBCC-
T ss_pred CCCceEEcCCCCEEEEEecCc-EEEEEEEEEc-------------ceeEEEEEcCCCeeEEEEcCCccchhc
Confidence 11 23689999999877774 8999997632 12367888888889999654 44454
No 218
>2bud_A Males-absent on the first protein; transferase, MOF, HAT, acetyl-transfer, dosage compensation complex, DCC, royal family; NMR {Drosophila melanogaster} SCOP: b.34.13.3
Probab=51.67 E-value=13 Score=31.90 Aligned_cols=59 Identities=8% Similarity=0.160 Sum_probs=44.1
Q ss_pred CCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCE--EEEeCCCccccccc
Q 002995 83 EPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF--ARINVKQVISFLKG 147 (860)
Q Consensus 83 ~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~--awv~~~~l~~f~~~ 147 (860)
.+|..|+++-++=-|-+|.|+..... +...+...|.|.|-|-+.+ -||+.++|..+.+.
T Consensus 16 ~~~e~vlc~~~dg~~yeAeIl~ir~~------~~~~~~~~YYVHY~g~NkRlDEWV~~~RL~~~~~~ 76 (92)
T 2bud_A 16 NPDKIYFIRREDGTVHRGQVLQSRTT------ENAAAPDEYYVHYVGLNRRLDGWVGRHRISDNADD 76 (92)
T ss_dssp CTTSCEEEECTTSCEEEEEEEEEECT------TTCSSCCEEEEECSSSCTTTCEEEETTTEESCHHH
T ss_pred CCCCEEEEEeCCCCEEEEEEEEEeec------cCCCCCcEEEEEeCCcccccccccCHHHhchhccc
Confidence 36889999996667889999874321 1112345799999999885 89999999988763
No 219
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=51.29 E-value=12 Score=27.94 Aligned_cols=34 Identities=26% Similarity=0.391 Sum_probs=24.4
Q ss_pred CCCccccccCCcccCCCeeEEccccCceecccccc
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg 429 (860)
+...|.||...-..+ +..+....|+-.+|..|..
T Consensus 4 ~~~~C~IC~~~~~~~-~~~~~~~~C~H~f~~~Ci~ 37 (55)
T 1iym_A 4 DGVECAVCLAELEDG-EEARFLPRCGHGFHAECVD 37 (55)
T ss_dssp CSCCCTTTCCCCCTT-SCCEECSSSCCEECTTHHH
T ss_pred CCCcCccCCccccCC-CceEECCCCCCcccHHHHH
Confidence 457899998764432 2345555799999999975
No 220
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=51.22 E-value=4.9 Score=31.46 Aligned_cols=32 Identities=22% Similarity=0.637 Sum_probs=25.6
Q ss_pred CCCccccccCCcccCCCeeEEccccCceecccccc
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg 429 (860)
....|+.|..-- ...-+.|..|++.+|..|..
T Consensus 21 ~pt~C~~C~~~i---~kqg~kC~~C~~~cH~kC~~ 52 (59)
T 1rfh_A 21 GPGWCDLCGREV---LRQALRCANCKFTCHSECRS 52 (59)
T ss_dssp CCEECTTTCSEE---CSCCEECTTTSCEECHHHHT
T ss_pred CCeEchhcchhh---hhCccEeCCCCCeEehhhhh
Confidence 346899997654 34568999999999999975
No 221
>2g3r_A Tumor suppressor P53-binding protein 1; tandem tudor domains, cell cycle-transcription complex; 1.25A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2ig0_A* 3lgf_A* 3lgl_A* 3lh0_A* 1xni_A
Probab=49.97 E-value=7.5 Score=34.80 Aligned_cols=91 Identities=20% Similarity=0.202 Sum_probs=58.6
Q ss_pred CceeeeeeeecCCCCceEEEecCCCccccccccceEEEEEccchhhhhhcccCCCCCCCCCCChhhHHHhhcCccCCCCC
Q 002995 3 DWYSGFVVGYDSESNRHHVKYVDGDEEDLILSNERIKFYISQEEMDCLKLSFSINNVDNDGYDYDEMVVLAASLDDCQEL 82 (860)
Q Consensus 3 ~~~~g~v~~~~~~~~~h~~~y~d~d~e~~~l~~e~i~~~~s~~e~~~l~~~~~~~~~~~~~~~~de~~~~~~~~~~~~~f 82 (860)
.||.|.|++ +..-++..|+.|||++-.+.. ++|.+ +..+
T Consensus 20 ~yYpG~V~~-~~~~~ky~V~FdDg~~~~v~~--k~iiv--------------------------------------~d~i 58 (123)
T 2g3r_A 20 YFYSGKITR-DVGAGKYKLLFDDGYECDVLG--KDILL--------------------------------------CDPI 58 (123)
T ss_dssp CEEEEEEEE-EEETTEEEEEETTSCEEEEEG--GGEEC--------------------------------------CSSC
T ss_pred cCcccEEEE-eccCCeEEEEEcCCCeeEeec--ceEEE--------------------------------------eccc
Confidence 499999999 578889999999999876652 22221 1223
Q ss_pred CCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCccccc
Q 002995 83 EPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFL 145 (860)
Q Consensus 83 ~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~ 145 (860)
.+|.-|.|-...==.=||+|..-. +....-.|+|.= +...-|++.+++..=.
T Consensus 59 p~g~~V~A~teddy~~~GiI~~~k---------~~~~e~~Y~Ve~--dG~~~~~~~~~viLs~ 110 (123)
T 2g3r_A 59 PLDTEVTALSEDEYFSAGVVKGHR---------KESGELYYSIEK--EGQRKWYKRMAVILSL 110 (123)
T ss_dssp CTTCEEEEECTTSCEEEEEEEEEE---------EETTEEEEEEEE--TTEEEEEEGGGEEBCH
T ss_pred CCCcEEEEeecCccccceEEEEEe---------cCCCeEEEEEEe--CCcEEEEEeeeEEeCH
Confidence 345556666554444467776421 123445588983 7778898888776433
No 222
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.23 E-value=8 Score=32.11 Aligned_cols=35 Identities=20% Similarity=0.562 Sum_probs=24.3
Q ss_pred CCCccccccCCccc----------CCCeeEEccccCceecccccc
Q 002995 395 DLDKCSVCHMDEEY----------QNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 395 ~~~~C~vC~~~~~~----------~~n~ll~C~~C~~~vH~~CYg 429 (860)
+++.|.||+..-.. .++.++.-..|+-.||..|..
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~ 58 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMS 58 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHH
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHH
Confidence 45689999876533 233344445899999999975
No 223
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=48.37 E-value=7 Score=33.04 Aligned_cols=50 Identities=24% Similarity=0.605 Sum_probs=36.6
Q ss_pred CCCccccccCC--cccCCCeeEEccccCceeccccccccccCCCCceeeecccC
Q 002995 395 DLDKCSVCHMD--EEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 395 ~~~~C~vC~~~--~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~ 446 (860)
...+|.||+.. -..+.+.++-|..|...|-..||--.. .++ .-.|..|+.
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYEr-keG-~q~CpqCkt 66 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYER-REG-TQNCPQCKT 66 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHH-HTS-CSSCTTTCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHH-hcc-CccccccCC
Confidence 34699999874 245667899999999999999995221 223 556777764
No 224
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=48.04 E-value=9.9 Score=28.60 Aligned_cols=29 Identities=28% Similarity=0.766 Sum_probs=23.2
Q ss_pred CccccccCCcccCCCeeEEccccCceecccccc
Q 002995 397 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 397 ~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg 429 (860)
..|++|...- .. =+.|..|+..+|+.|-.
T Consensus 15 t~C~~C~k~i-~~---G~kC~~Ck~~cH~kC~~ 43 (49)
T 1kbe_A 15 QVCNVCQKSM-IF---GVKCKHCRLKCHNKCTK 43 (49)
T ss_dssp CCCSSSCCSS-CC---EEEETTTTEEESSSCTT
T ss_pred cCccccCcee-EC---cCCCCCCCCccchhhcC
Confidence 6899997643 21 27899999999999965
No 225
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=47.79 E-value=11 Score=42.72 Aligned_cols=33 Identities=15% Similarity=0.231 Sum_probs=28.5
Q ss_pred eeEEEEEecccCeeEEeeecCCCCCEEEEecCE
Q 002995 696 KRLAFGKSGIHGFGIFAKHPHRAGDMVIEYTGE 728 (860)
Q Consensus 696 ~~l~v~~s~~~G~GvfA~~~i~~g~~I~ey~Ge 728 (860)
..+.+...+..|+||+|+++|++|+.|+...-.
T Consensus 93 ~~v~i~~~~~~GrGl~A~~dI~~ge~ll~IP~~ 125 (497)
T 3smt_A 93 EGFEMVNFKEEGFGLRATRDIKAEELFLWVPRK 125 (497)
T ss_dssp TTEEEEEETTTEEEEEESSCBCTTCEEEEEEGG
T ss_pred cceEEEEcCCCccEEEEcccCCCCCEEEEcCHH
Confidence 468999999999999999999999999875443
No 226
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=47.51 E-value=2 Score=33.84 Aligned_cols=50 Identities=22% Similarity=0.471 Sum_probs=28.7
Q ss_pred cCCCccccccCCcccCCCeeEEc--cccCceeccccccccccCCCCceeeecccC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQC--DKCRMMVHARCYGELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C--~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~ 446 (860)
.+...|-||+...+ +..+.-| .+.-..||+.|.-.=....+ .+.|+.|..
T Consensus 4 ~~~~~CrIC~~~~~--~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~-~~~C~~C~~ 55 (60)
T 1vyx_A 4 EDVPVCWICNEELG--NERFRACGCTGELENVHRSCLSTWLTISR-NTACQICGV 55 (60)
T ss_dssp CSCCEETTTTEECS--CCCCCSCCCSSGGGSCCHHHHHHHHHHHT-CSBCTTTCC
T ss_pred CCCCEeEEeecCCC--CceecCcCCCCchhhhHHHHHHHHHHhCC-CCccCCCCC
Confidence 45578999987532 2234554 34445999999752111112 356666654
No 227
>1ssf_A Transformation related protein 53 binding protein 1; tudor domains, tandem, SH3-like fold, beta barrel, alpha- helix, cell cycle; NMR {Mus musculus} SCOP: b.34.9.1 b.34.9.1
Probab=47.43 E-value=35 Score=31.85 Aligned_cols=92 Identities=17% Similarity=0.133 Sum_probs=57.3
Q ss_pred CceeeeeeeecCCCCceEEEecCCCccccccccceEEEEEccchhhhhhcccCCCCCCCCCCChhhHHHhhcCccCCCCC
Q 002995 3 DWYSGFVVGYDSESNRHHVKYVDGDEEDLILSNERIKFYISQEEMDCLKLSFSINNVDNDGYDYDEMVVLAASLDDCQEL 82 (860)
Q Consensus 3 ~~~~g~v~~~~~~~~~h~~~y~d~d~e~~~l~~e~i~~~~s~~e~~~l~~~~~~~~~~~~~~~~de~~~~~~~~~~~~~f 82 (860)
-||.|.|+.+ ..-++..|+.|||.+-.+...+ |.+. ..|
T Consensus 24 yyYpG~V~~~-~~~~~Y~V~FdDG~~k~v~~~d--ivv~--------------------------------------~~L 62 (156)
T 1ssf_A 24 YFYSGKITRD-VGAGKYKLLFDDGYECDVLGKD--ILLC--------------------------------------DPI 62 (156)
T ss_dssp EEEEEEEEEC-CTTTEEEEECTTSCEEEEETTT--EEEE--------------------------------------CCS
T ss_pred cccccEEEEe-ccCCEEEEEEcCCCeeEeeccc--eEEE--------------------------------------ecc
Confidence 3789999996 6667799999999987776432 2221 122
Q ss_pred CCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCcccccc
Q 002995 83 EPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLK 146 (860)
Q Consensus 83 ~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~ 146 (860)
.++.-|.|-...==|=||+|.. + +....+..|.|.+ +...-|++.++|..=.+
T Consensus 63 P~~~~V~A~~~ddy~s~giI~~--h-------~~~~~e~~Y~Ve~--~G~t~~~~~~dI~LS~e 115 (156)
T 1ssf_A 63 PLDTEVTALSEDEYFSAGVVKG--H-------RKESGELYYSIEK--EGQRKWYKRMAVILSLE 115 (156)
T ss_dssp CSSEEEEESSCTTTCEEEEEEE--E-------EEETTEEEEEEEE--TTEEEEECGGGEEEEHH
T ss_pred CCCcEEEEccCCccccccEEEe--e-------cCCCCcEEEEEEe--CCcEEEEEeeeEEECHH
Confidence 3344455553322233555542 1 2234456689997 88889998888765443
No 228
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=46.53 E-value=5.3 Score=45.24 Aligned_cols=27 Identities=22% Similarity=0.643 Sum_probs=23.2
Q ss_pred cceecCCc---ceeeEEcCCCCcCccccchhh
Q 002995 510 LCSICGVS---YGACIQCSNTTCRVAYHPLCA 538 (860)
Q Consensus 510 ~C~~C~~~---~Ga~iqC~~~~C~~~fH~~CA 538 (860)
..++|++. .|.||||. .|..|||..|.
T Consensus 38 ~yC~C~~~~d~~~~MIqCd--~C~~WfH~~Cv 67 (488)
T 3kv5_D 38 VYCVCRQPYDVNRFMIECD--ICKDWFHGSCV 67 (488)
T ss_dssp EETTTTEECCTTSCEEEBT--TTCCEEEHHHH
T ss_pred eEEeCCCcCCCCCCeEEcc--CCCCceeeeec
Confidence 34499985 68999999 79999999998
No 229
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.03 E-value=9.1 Score=31.49 Aligned_cols=31 Identities=23% Similarity=0.599 Sum_probs=24.5
Q ss_pred CCCccccccCCcccCCCeeEEccccCceecccccc
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg 429 (860)
....|.||...-.. -+.|..|+..+|..|..
T Consensus 14 ~i~~C~IC~~~i~~----g~~C~~C~h~fH~~Ci~ 44 (74)
T 2ct0_A 14 AVKICNICHSLLIQ----GQSCETCGIRMHLPCVA 44 (74)
T ss_dssp SSCBCSSSCCBCSS----SEECSSSCCEECHHHHH
T ss_pred CCCcCcchhhHccc----CCccCCCCchhhHHHHH
Confidence 34689999986532 35799999999999975
No 230
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=45.97 E-value=8.5 Score=32.87 Aligned_cols=31 Identities=26% Similarity=0.653 Sum_probs=25.4
Q ss_pred CccccccCCcccCCCeeEEccccCceeccccccc
Q 002995 397 DKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGE 430 (860)
Q Consensus 397 ~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~ 430 (860)
..|++|.... ..-...|..|+..+|..|.-.
T Consensus 48 ~~C~~C~~~~---~~~~Y~C~~C~f~lH~~Ca~~ 78 (89)
T 1v5n_A 48 YTCDKCEEEG---TIWSYHCDECDFDLHAKCALN 78 (89)
T ss_dssp CCCTTTSCCC---CSCEEECTTTCCCCCHHHHHC
T ss_pred eEeCCCCCcC---CCcEEEcCCCCCeEcHHhcCC
Confidence 5799998763 345899999999999999743
No 231
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=45.53 E-value=3.4 Score=37.78 Aligned_cols=34 Identities=29% Similarity=0.685 Sum_probs=27.5
Q ss_pred eEEccccCceeccccccccc--------cCCCCceeeecccC
Q 002995 413 FLQCDKCRMMVHARCYGELE--------PVNGVLWLCNLCRP 446 (860)
Q Consensus 413 ll~C~~C~~~vH~~CYg~~~--------~~~~~~W~C~~C~~ 446 (860)
||.||.|.--+|-.|-++.. .++...|.|..|..
T Consensus 2 mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~ 43 (140)
T 2ku7_A 2 MMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTE 43 (140)
T ss_dssp CCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTT
T ss_pred ccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccc
Confidence 78999999999999988642 24455799999975
No 232
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.26 E-value=33 Score=27.18 Aligned_cols=49 Identities=14% Similarity=0.393 Sum_probs=30.2
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccCC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 447 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~~ 447 (860)
.+...|.||...-. ++.+. .|+-.+|..|........+..-.|+.|+..
T Consensus 18 ~~~~~C~IC~~~~~---~~~~~--~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~ 66 (73)
T 2ysl_A 18 QEEVICPICLDILQ---KPVTI--DCGHNFCLKCITQIGETSCGFFKCPLCKTS 66 (73)
T ss_dssp CCCCBCTTTCSBCS---SEEEC--TTCCEEEHHHHHHHCSSSCSCCCCSSSCCC
T ss_pred ccCCEeccCCcccC---CeEEc--CCCChhhHHHHHHHHHcCCCCCCCCCCCCc
Confidence 34579999997533 33443 899888888875322211224567777653
No 233
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=42.92 E-value=8.7 Score=31.85 Aligned_cols=28 Identities=29% Similarity=0.822 Sum_probs=22.7
Q ss_pred cceecCCc--ceeeEEcCCCCcCccccchhhh
Q 002995 510 LCSICGVS--YGACIQCSNTTCRVAYHPLCAR 539 (860)
Q Consensus 510 ~C~~C~~~--~Ga~iqC~~~~C~~~fH~~CA~ 539 (860)
.|.+|++. .+.+|.|. .|..+||..|..
T Consensus 28 ~C~vC~~~~d~~~ll~CD--~C~~~yH~~Cl~ 57 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCD--ECDMAFHIYCLD 57 (77)
T ss_dssp SBTTTCCCSCGGGEEECT--TTCCEEETTTSS
T ss_pred cCCccCCCCCCcceeEeC--CCCCccCcccCC
Confidence 47777764 47899998 899999999974
No 234
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=42.64 E-value=8.8 Score=32.40 Aligned_cols=34 Identities=18% Similarity=0.373 Sum_probs=25.2
Q ss_pred CCccccccCCcccCCCe--eEEccccCceecccccc
Q 002995 396 LDKCSVCHMDEEYQNNL--FLQCDKCRMMVHARCYG 429 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~--ll~C~~C~~~vH~~CYg 429 (860)
...|+.|...--.-..+ -+.|..|++.+|..|..
T Consensus 35 PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~ 70 (84)
T 2row_A 35 PTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMD 70 (84)
T ss_dssp CEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHH
T ss_pred CcchhhcCHhhhccccCCCCCEecCCCCccchhHhC
Confidence 35899996532211233 78899999999999987
No 235
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=42.10 E-value=8.4 Score=38.80 Aligned_cols=28 Identities=29% Similarity=0.822 Sum_probs=21.5
Q ss_pred cceecCCc--ceeeEEcCCCCcCccccchhhh
Q 002995 510 LCSICGVS--YGACIQCSNTTCRVAYHPLCAR 539 (860)
Q Consensus 510 ~C~~C~~~--~Ga~iqC~~~~C~~~fH~~CA~ 539 (860)
.|.+|+.. .|.+|.|. .|...||..|..
T Consensus 176 ~C~vC~~~~~~~~lL~CD--~C~~~yH~~CL~ 205 (226)
T 3ask_A 176 ACHLCGGRQDPDKQLMCD--ECDMAFHIYCLD 205 (226)
T ss_dssp SCSSSCCCCC--CCEECS--SSCCEECSCC--
T ss_pred CCcCCCCCCCCCCeEEcC--CCCcceeCccCC
Confidence 59999874 68899998 899999999974
No 236
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=41.61 E-value=9.1 Score=35.69 Aligned_cols=29 Identities=28% Similarity=0.560 Sum_probs=25.4
Q ss_pred ccceecCCcceeeEEcCCCCcCccccchhhhh
Q 002995 509 LLCSICGVSYGACIQCSNTTCRVAYHPLCARA 540 (860)
Q Consensus 509 ~~C~~C~~~~Ga~iqC~~~~C~~~fH~~CA~~ 540 (860)
..|.+|+. +|-.|-|. .|...||..|-..
T Consensus 64 d~C~vC~~-GG~LlcCD--~Cpr~Fh~~Cl~p 92 (142)
T 2lbm_A 64 EQCRWCAE-GGNLICCD--FCHNAFCKKCILR 92 (142)
T ss_dssp CSCSSSCC-CSSEEECS--SSCCEEEHHHHHH
T ss_pred CeecccCC-CCcEEeCC--CCCCeeeHhhcCC
Confidence 47999998 88888887 9999999999854
No 237
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.28 E-value=11 Score=31.03 Aligned_cols=31 Identities=26% Similarity=0.565 Sum_probs=25.3
Q ss_pred ccceecCCcceeeEEcCCCCcCccccchhhhhc
Q 002995 509 LLCSICGVSYGACIQCSNTTCRVAYHPLCARAA 541 (860)
Q Consensus 509 ~~C~~C~~~~Ga~iqC~~~~C~~~fH~~CA~~~ 541 (860)
..|.||....-..+.|. .|...||..|..+-
T Consensus 16 ~~C~IC~~~i~~g~~C~--~C~h~fH~~Ci~kW 46 (74)
T 2ct0_A 16 KICNICHSLLIQGQSCE--TCGIRMHLPCVAKY 46 (74)
T ss_dssp CBCSSSCCBCSSSEECS--SSCCEECHHHHHHH
T ss_pred CcCcchhhHcccCCccC--CCCchhhHHHHHHH
Confidence 47999998655567897 99999999999643
No 238
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=41.16 E-value=6.8 Score=38.50 Aligned_cols=28 Identities=25% Similarity=0.813 Sum_probs=24.3
Q ss_pred cceecCCcceeeEEcCCCCcCccccchhhhh
Q 002995 510 LCSICGVSYGACIQCSNTTCRVAYHPLCARA 540 (860)
Q Consensus 510 ~C~~C~~~~Ga~iqC~~~~C~~~fH~~CA~~ 540 (860)
.|.+|+. .|..|-|. +|...||..|...
T Consensus 4 ~C~~C~~-~g~ll~Cd--~C~~~~H~~Cl~p 31 (189)
T 2ro1_A 4 ICRVCQK-PGDLVMCN--QCEFCFHLDCHLP 31 (189)
T ss_dssp CBTTTCC-CSSCCCCT--TTCCBCCSTTSTT
T ss_pred cCccCCC-CCceeECC--CCCchhccccCCC
Confidence 6999997 67888998 8999999999743
No 239
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=39.32 E-value=13 Score=31.54 Aligned_cols=31 Identities=29% Similarity=0.365 Sum_probs=25.0
Q ss_pred CCCccccCCCC-CCceecC---CCceecccccccc
Q 002995 452 PPPCCLCPVVG-GAMKPTT---DGRWAHLACAIWI 482 (860)
Q Consensus 452 ~~~C~lC~~~g-Galk~t~---~g~wvH~~Ca~~~ 482 (860)
...|.+|..++ ||-.+.. .....|+.||+..
T Consensus 17 ~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~~a 51 (87)
T 2lq6_A 17 KLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQKA 51 (87)
T ss_dssp CCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHHHH
T ss_pred cCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHHHC
Confidence 45799998874 9988876 4589999999764
No 240
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=38.15 E-value=8.7 Score=31.84 Aligned_cols=51 Identities=24% Similarity=0.554 Sum_probs=31.5
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccCC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 447 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~~ 447 (860)
.++..|.||.+.-...+-.++.| .||-.+++.|+..... .....|+.|+..
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~--~~~~~CP~CR~~ 59 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRT--DENGLCPACRKP 59 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTT--SSCSBCTTTCCB
T ss_pred ccCCcCCccCccCcccccccccc-CCCCCcCHHHHHHHHh--cCCCCCCCCCCc
Confidence 34578999998543222223344 6888888888753221 125678888754
No 241
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=37.78 E-value=27 Score=28.26 Aligned_cols=49 Identities=20% Similarity=0.376 Sum_probs=28.8
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccCC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 447 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~~ 447 (860)
.+...|.||+..-..... + .--.|+-.||..|.-.-.. . ...|+.|+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~-~-~~~~C~H~fc~~Ci~~~~~--~-~~~CP~Cr~~ 61 (78)
T 2ect_A 13 GSGLECPVCKEDYALGES-V-RQLPCNHLFHDSCIVPWLE--Q-HDSCPVCRKS 61 (78)
T ss_dssp SSSCCCTTTTSCCCTTSC-E-EECTTSCEEETTTTHHHHT--T-TCSCTTTCCC
T ss_pred CCCCCCeeCCccccCCCC-E-EEeCCCCeecHHHHHHHHH--c-CCcCcCcCCc
Confidence 345799999876433322 2 2235999999999752111 1 2357777653
No 242
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=37.69 E-value=19 Score=39.52 Aligned_cols=35 Identities=26% Similarity=0.560 Sum_probs=28.1
Q ss_pred CCCccccccCCcccCCCeeEEccccCceecccccc
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg 429 (860)
....|.+|...-..-.+.-..|..|+..||..|..
T Consensus 356 ~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~ 390 (406)
T 2vrw_B 356 ETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLG 390 (406)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGG
T ss_pred CCCCCccccchhceeCCCCCCCCCCcCccchhhhh
Confidence 34699999876543456678999999999999976
No 243
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=37.06 E-value=12 Score=33.04 Aligned_cols=35 Identities=17% Similarity=0.418 Sum_probs=22.6
Q ss_pred CCCccccccCCcccC-------------CCeeEEccccCceecccccc
Q 002995 395 DLDKCSVCHMDEEYQ-------------NNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~-------------~n~ll~C~~C~~~vH~~CYg 429 (860)
+++.|.||...-... ++..+.--.|+-.||..|..
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~ 83 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCIS 83 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHH
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHH
Confidence 457899998753321 12233445799999999964
No 244
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.52 E-value=16 Score=30.08 Aligned_cols=50 Identities=22% Similarity=0.476 Sum_probs=36.8
Q ss_pred CCCccccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccCC
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 447 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~~ 447 (860)
....|.-|...-.--.|.-..|..|...|-..|= +... . ..|+|-.|...
T Consensus 24 ~~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Cr-v~~~-~-~~W~C~VC~k~ 73 (76)
T 2csz_A 24 SDRTCARCQESLGRLSPKTNTCRGCNHLVCRDCR-IQES-N-GTWRCKVCSGP 73 (76)
T ss_dssp CCCBCSSSCCBCSSSCTTTSEETTTTEECCTTSE-EECS-T-TCEEEHHHHSS
T ss_pred CccchhhhCccccccccCCCcCcccChhhccccc-ccCC-C-CCEEEeeCchh
Confidence 3468999988665555566689999999999994 3221 2 48999999753
No 245
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=36.49 E-value=14 Score=29.16 Aligned_cols=49 Identities=20% Similarity=0.373 Sum_probs=29.5
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccCC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 447 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~~ 447 (860)
.+...|.||...-.... .+..-.|+-.||..|...-... ...|+.|+..
T Consensus 12 ~~~~~C~IC~~~~~~~~--~~~~~~C~H~fc~~Ci~~~~~~---~~~CP~Cr~~ 60 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGE--DVRRLPCMHLFHQVCVDQWLIT---NKKCPICRVD 60 (69)
T ss_dssp TCCCSBTTTTBCCCSSS--CEEECTTSCEEEHHHHHHHHHH---CSBCTTTCSB
T ss_pred CCCCCCeeCCccccCCC--cEEEeCCCCHHHHHHHHHHHHc---CCCCcCcCcc
Confidence 34568999987543222 2334469999999997521111 1247777754
No 246
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=35.85 E-value=8.3 Score=34.74 Aligned_cols=34 Identities=18% Similarity=0.476 Sum_probs=0.5
Q ss_pred CCccccccCCccc-------------CCCeeEEccccCceecccccc
Q 002995 396 LDKCSVCHMDEEY-------------QNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 396 ~~~C~vC~~~~~~-------------~~n~ll~C~~C~~~vH~~CYg 429 (860)
++.|.||+..-.. .++..+.--.|+-.||..|..
T Consensus 48 ~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~ 94 (117)
T 4a0k_B 48 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCIS 94 (117)
T ss_dssp C----------------------------------------------
T ss_pred CCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHH
Confidence 4689999875432 111122223688889999953
No 247
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.21 E-value=21 Score=28.71 Aligned_cols=49 Identities=27% Similarity=0.554 Sum_probs=29.6
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccCC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 447 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~~ 447 (860)
.+...|.||+..-.... .+..-.|+-.||..|...-... ...|+.|+..
T Consensus 21 ~~~~~C~IC~~~~~~~~--~~~~l~C~H~fh~~Ci~~w~~~---~~~CP~Cr~~ 69 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQ--LLRVLPCNHEFHAKCVDKWLKA---NRTCPICRAD 69 (75)
T ss_dssp SSCCEETTTTEECCBTC--EEEEETTTEEEETTHHHHHHHH---CSSCTTTCCC
T ss_pred CCCCCCeECCcccCCCC--eEEEECCCCHhHHHHHHHHHHc---CCcCcCcCCc
Confidence 34578999997543322 3444569999999997521110 1256666643
No 248
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=34.92 E-value=11 Score=33.27 Aligned_cols=34 Identities=18% Similarity=0.332 Sum_probs=22.7
Q ss_pred CCccccccCCccc-------------CCCeeEEccccCceecccccc
Q 002995 396 LDKCSVCHMDEEY-------------QNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 396 ~~~C~vC~~~~~~-------------~~n~ll~C~~C~~~vH~~CYg 429 (860)
+..|.||+..-.. .....+.--.|+-.||..|..
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~ 71 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLL 71 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHH
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHH
Confidence 4689999865321 112244456899999999975
No 249
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.17 E-value=17 Score=28.44 Aligned_cols=50 Identities=16% Similarity=0.364 Sum_probs=30.4
Q ss_pred cCCCccccccCCcccC--CCeeEEccccCceeccccccccccCCCCceeeecccC
Q 002995 394 KDLDKCSVCHMDEEYQ--NNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~--~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~ 446 (860)
.+...|.||+..-... ....+.--.|+-.||..|...-... .-.|+.|+.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~ 64 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN---ANTCPTCRK 64 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH---CSSCTTTCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc---CCCCCCCCC
Confidence 4557899999864322 2234455689999999997521110 124666664
No 250
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=34.01 E-value=19 Score=26.80 Aligned_cols=48 Identities=23% Similarity=0.547 Sum_probs=29.3
Q ss_pred CCCccccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccC
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~ 446 (860)
+...|.||...-... +..+..-.|+-.||..|...-... ...|+.|+.
T Consensus 4 ~~~~C~IC~~~~~~~-~~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~ 51 (55)
T 2ecm_A 4 GSSGCPICLEDIHTS-RVVAHVLPCGHLLHRTCYEEMLKE---GYRCPLCSG 51 (55)
T ss_dssp CCCSCTTTCCCCCTT-TSCEEECTTSCEEETTHHHHHHHH---TCCCTTSCC
T ss_pred CCCcCcccChhhcCC-CcCeEecCCCCcccHHHHHHHHHc---CCcCCCCCC
Confidence 346899998764322 224456679999999997521111 135666654
No 251
>1y71_A Kinase-associated protein B; structural genomics, midwest CE structural genomics, MCSG, protein structure initiative, PS unknown function; 1.95A {Bacillus cereus} SCOP: b.34.16.1
Probab=33.75 E-value=51 Score=29.78 Aligned_cols=52 Identities=19% Similarity=0.246 Sum_probs=30.6
Q ss_pred CcEEEEEeCCCC------EEEEeCCCcccccccccccccccCChHHHHHHHHHHHHHHHhCCCc
Q 002995 121 RSIPVQFFGTHD------FARINVKQVISFLKGLLSSFHLKCKKPRFTQSLEEAKVYLSEQKLP 178 (860)
Q Consensus 121 ~~~~V~FFg~~~------~awv~~~~l~~f~~~~~~~~~~k~k~~~~~~A~~ea~~~~~~~~~~ 178 (860)
+.+.|-||.... -+||+...|+||..+ +.. -..++++|+...++.|.....+
T Consensus 55 ~q~dvpfFHERkALs~~Ek~~ip~~~vk~yege-ipd-----Y~~SLq~Al~~~~~~L~~~~s~ 112 (130)
T 1y71_A 55 KQANVPFFHERRALAFREQTNIPEQMVKKYEGE-IPD-----YTESLKLALETQMNSFSEDDSP 112 (130)
T ss_dssp ---------CCCCCCTTCEEEEEGGGEEECCSC-CCC-----HHHHHHHHHHHHHHTTTTCCSH
T ss_pred CcCCCcceeehhhccHHHHhcCCHHhccccCCC-CCC-----HHHHHHHHHHHHHHHHhccCcH
Confidence 455699997643 499999999999874 332 3467888888877777665444
No 252
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=33.31 E-value=21 Score=40.00 Aligned_cols=32 Identities=19% Similarity=0.528 Sum_probs=25.9
Q ss_pred eeEEEEEe-cccCeeEEeeecCCCCCEEEEecC
Q 002995 696 KRLAFGKS-GIHGFGIFAKHPHRAGDMVIEYTG 727 (860)
Q Consensus 696 ~~l~v~~s-~~~G~GvfA~~~i~~g~~I~ey~G 727 (860)
..+.|... ...|+||+|+++|++|+.|+...-
T Consensus 38 ~~v~i~~~~~~~G~Gv~A~~dI~~ge~ll~IP~ 70 (449)
T 3qxy_A 38 PKVAVSRQGTVAGYGMVARESVQAGELLFVVPR 70 (449)
T ss_dssp TTEEEESSSCSSSSEEEESSCBCTTCEEEEEEG
T ss_pred CceEEEecCCCceEEEEECCCCCCCCEEEEeCc
Confidence 45777764 478999999999999999987443
No 253
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=32.93 E-value=27 Score=31.33 Aligned_cols=54 Identities=17% Similarity=0.190 Sum_probs=38.2
Q ss_pred CCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCE-EEEeCCCcccccc
Q 002995 80 QELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDF-ARINVKQVISFLK 146 (860)
Q Consensus 80 ~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~-awv~~~~l~~f~~ 146 (860)
..+.+||.||||-+.=..-.|.|+.-. . ...|.|.|= |+++ -++++.+|....-
T Consensus 4 ~~v~vGq~V~akh~ngryy~~~V~~~~---------~---~~~y~V~F~-DgS~s~dl~peDIvs~dc 58 (118)
T 2qqr_A 4 QSITAGQKVISKHKNGRFYQCEVVRLT---------T---ETFYEVNFD-DGSFSDNLYPEDIVSQDC 58 (118)
T ss_dssp SCCCTTCEEEEECTTSSEEEEEEEEEE---------E---EEEEEEEET-TSCEEEEECGGGBCSSCH
T ss_pred ceeccCCEEEEECCCCCEEeEEEEEEe---------e---EEEEEEEcC-CCCccCCCCHhhcccccc
Confidence 467899999999877666799997621 1 112456655 7674 6889998887763
No 254
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.54 E-value=16 Score=30.22 Aligned_cols=52 Identities=13% Similarity=0.272 Sum_probs=30.0
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~ 446 (860)
.+...|.||...-.......+.- .|+-.||..|.............|+.|+.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~ 64 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLL-HCGHTICRQCLEKLLASSINGVRCPFCSK 64 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEEC-SSSCEEEHHHHHHHHHHCSSCBCCTTTCC
T ss_pred cCCCCCccCCccccccCCCeEEC-CCCChhhHHHHHHHHHcCCCCcCCCCCCC
Confidence 34578999987644332212222 79999999997532111112456666664
No 255
>1nj3_A NPL4; NZF domain, rubredoxin knuckle, beta-ribbon, zinc- finger, ubiquitin, protein binding; NMR {Rattus norvegicus} SCOP: g.41.11.1 PDB: 1q5w_A
Probab=32.43 E-value=19 Score=23.97 Aligned_cols=24 Identities=21% Similarity=0.695 Sum_probs=19.5
Q ss_pred CceeeecccCCCCCCCCCccccCC
Q 002995 437 VLWLCNLCRPGAPEPPPPCCLCPV 460 (860)
Q Consensus 437 ~~W~C~~C~~~~~~~~~~C~lC~~ 460 (860)
..|-|..|.+........|..|..
T Consensus 5 ~~W~C~~CTf~N~~~~~~Ce~C~~ 28 (31)
T 1nj3_A 5 AMWACQHCTFMNQPGTGHCEMCSL 28 (31)
T ss_dssp CCEECSSSCCEECSSCSSCSSSCC
T ss_pred ccccCCcccccCCCCCCccCCcCC
Confidence 479999999877666778988864
No 256
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=32.26 E-value=26 Score=40.55 Aligned_cols=36 Identities=25% Similarity=0.587 Sum_probs=27.8
Q ss_pred CCCccccccCCcccCCCeeEEccccCceeccccccc
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGE 430 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~ 430 (860)
.-..|.+|...--.-...-+.|..|++.||..|.+.
T Consensus 528 ~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~ 563 (587)
T 3ky9_A 528 ETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGR 563 (587)
T ss_dssp SCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGG
T ss_pred CCcccccccccccccccCCcCCCCCCCccchhhhhc
Confidence 346999998753333455789999999999999874
No 257
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.96 E-value=17 Score=30.17 Aligned_cols=17 Identities=35% Similarity=0.292 Sum_probs=14.9
Q ss_pred EEEEccCCCCCCeEEEe
Q 002995 796 IIFAKRDIKQWEELTYD 812 (860)
Q Consensus 796 ~i~A~RdI~~GEELt~d 812 (860)
.++|.|||++||-||-+
T Consensus 8 slvA~rdI~~Gevit~~ 24 (79)
T 1wvo_A 8 SVVAKVKIPEGTILTMD 24 (79)
T ss_dssp EEEESSCBCTTCBCCGG
T ss_pred EEEEeCccCCCCCcCHH
Confidence 57899999999999864
No 258
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=30.08 E-value=44 Score=25.88 Aligned_cols=31 Identities=19% Similarity=0.197 Sum_probs=28.4
Q ss_pred CceeeeeeeecCCCCceEEEecCCCcccccc
Q 002995 3 DWYSGFVVGYDSESNRHHVKYVDGDEEDLIL 33 (860)
Q Consensus 3 ~~~~g~v~~~~~~~~~h~~~y~d~d~e~~~l 33 (860)
.+|.|.|+.-|.....--|++.|+-+-|+..
T Consensus 18 ~fYlGtI~~V~~~~~~clV~F~D~s~~W~~~ 48 (58)
T 4hcz_A 18 LLYLGTIKKVDSAREVCLVQFEDDSQFLVLW 48 (58)
T ss_dssp CEEEEEEEEEETTTTEEEEEETTSCEEEEEG
T ss_pred CEEeEEEEEEecCCCEEEEEEcCCCeEEEEh
Confidence 4799999999999999999999999988865
No 259
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=30.00 E-value=1.1e+02 Score=30.23 Aligned_cols=100 Identities=16% Similarity=0.293 Sum_probs=63.2
Q ss_pred CCceeeeeeeecC--CCCceEEEecCCCccccccccceEEEEEccchhhhhhcccCCCCCCCCCCChhhHHHhhcCccCC
Q 002995 2 QDWYSGFVVGYDS--ESNRHHVKYVDGDEEDLILSNERIKFYISQEEMDCLKLSFSINNVDNDGYDYDEMVVLAASLDDC 79 (860)
Q Consensus 2 ~~~~~g~v~~~~~--~~~~h~~~y~d~d~e~~~l~~e~i~~~~s~~e~~~l~~~~~~~~~~~~~~~~de~~~~~~~~~~~ 79 (860)
..||.|.|+.=-+ ...+..|+++++.++ .++.- ++.-.+. ...
T Consensus 22 ~~W~rg~v~~I~~~~~g~~YkVkF~~~g~~--ivs~~------------hiA~~~~---------------------p~~ 66 (213)
T 3dlm_A 22 KTWHKGTLIAIQTVGPGKKYKVKFDNKGKS--LLSGN------------HIAYDYH---------------------PPA 66 (213)
T ss_dssp SBEEEEEEEEEEEETTEEEEEEEESSSCEE--EECGG------------GEEESSC---------------------CCG
T ss_pred CcEEEEEEEEEEECCCCeEEEEEEcCCCCE--Eeecc------------eEEEecC---------------------CCc
Confidence 4799999998433 347799999976653 12111 1111111 112
Q ss_pred CCCCCCCEEEEEeccc---CCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCcccccc
Q 002995 80 QELEPGDIIWAKLTGH---AMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLK 146 (860)
Q Consensus 80 ~~f~~GdlVwaK~~g~---PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~ 146 (860)
..+.+|-.|-|+.++= ..-||+|...+. ..++ ..|+ -||.|+.-.|++..++.+--.
T Consensus 67 ~~l~vG~RVVA~~~~~~~~~fY~GiVaE~p~-----~~N~----~RyL-VFFDDG~~~Yv~~~~V~~Vc~ 126 (213)
T 3dlm_A 67 DKLYVGSRVVAKYKDGNQVWLYAGIVAETPN-----VKNK----LRFL-IFFDDGYASYVTQSELYPICR 126 (213)
T ss_dssp GGCCTTCEEEEEEECSSCEEEEEEEEEECCC-----TTTT----SCEE-EEETTSCEEEECGGGEEEBSS
T ss_pred cEEeEEEEEEEEecCCCCcceeeeEEEECCc-----cCCC----ceEE-EEEeCCCcceecCceEEEEEE
Confidence 3577899999998653 467999976432 1121 1244 588888899999999886654
No 260
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=29.90 E-value=11 Score=34.30 Aligned_cols=17 Identities=29% Similarity=0.739 Sum_probs=15.1
Q ss_pred eeEEcCCCCcCccccchhh
Q 002995 520 ACIQCSNTTCRVAYHPLCA 538 (860)
Q Consensus 520 a~iqC~~~~C~~~fH~~CA 538 (860)
.||+|. .|..|||..|-
T Consensus 1 ~mi~c~--~c~~w~H~~c~ 17 (140)
T 2ku7_A 1 SMMQCG--KCDRWVHSKCE 17 (140)
T ss_dssp CCCCCS--CCSSCHHHHHC
T ss_pred Cccccc--cCCCccCCccc
Confidence 479998 89999999994
No 261
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=29.29 E-value=30 Score=35.16 Aligned_cols=46 Identities=22% Similarity=0.481 Sum_probs=30.9
Q ss_pred CCccccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccC
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~ 446 (860)
...|.+|.+--.. =+.|..|+..+|..|+..-....+ .-.|+.|..
T Consensus 180 i~~C~iC~~iv~~----g~~C~~C~~~~H~~C~~~~~~~~~-~~~CP~C~~ 225 (238)
T 3nw0_A 180 VKICNICHSLLIQ----GQSCETCGIRMHLPCVAKYFQSNA-EPRCPHCND 225 (238)
T ss_dssp CCBCTTTCSBCSS----CEECSSSCCEECHHHHHHHTTTCS-SCBCTTTCC
T ss_pred CCcCcchhhHHhC----CcccCccChHHHHHHHHHHHHhCC-CCCCCCCCC
Confidence 4689999875432 268999999999999863211111 235666654
No 262
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=28.86 E-value=20 Score=32.83 Aligned_cols=30 Identities=27% Similarity=0.538 Sum_probs=25.6
Q ss_pred ccceecCCcceeeEEcCCCCcCccccchhhhhc
Q 002995 509 LLCSICGVSYGACIQCSNTTCRVAYHPLCARAA 541 (860)
Q Consensus 509 ~~C~~C~~~~Ga~iqC~~~~C~~~fH~~CA~~~ 541 (860)
..|.+|.. +|-.|-|. .|...||..|-..+
T Consensus 58 ~~C~vC~d-GG~LlcCd--~Cpr~Fc~~Cl~~~ 87 (129)
T 3ql9_A 58 EQCRWCAE-GGNLICCD--FCHNAFCKKCILRN 87 (129)
T ss_dssp SSCTTTCC-CSEEEECS--SSSCEEEHHHHHHH
T ss_pred CcCeecCC-CCeeEecC--CCchhhhHHHhCCC
Confidence 46999998 78888886 99999999999654
No 263
>3gj3_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1 PDB: 2gqe_A
Probab=27.99 E-value=18 Score=24.79 Aligned_cols=24 Identities=21% Similarity=0.587 Sum_probs=18.9
Q ss_pred CCceeeecccCCCCCCCCCccccC
Q 002995 436 GVLWLCNLCRPGAPEPPPPCCLCP 459 (860)
Q Consensus 436 ~~~W~C~~C~~~~~~~~~~C~lC~ 459 (860)
...|-|..|..........|..|.
T Consensus 5 ~g~W~C~~C~~~N~~~~~kC~aC~ 28 (33)
T 3gj3_B 5 SGTWDCDTCLVQNKPEAVKCVACE 28 (33)
T ss_dssp -CCEECTTTCCEECTTCSBCTTTC
T ss_pred CCceeCCcccCCCccccCEEcccC
Confidence 348999999987666677899985
No 264
>2wac_A CG7008-PA; unknown function, tudor, beta-barrel, nuclease domain, tudor P100, SND1, methylated arginine, SDMA, splicing; 2.10A {Drosophila melanogaster}
Probab=27.53 E-value=57 Score=32.06 Aligned_cols=55 Identities=15% Similarity=0.227 Sum_probs=44.4
Q ss_pred CCCCCCCEEEEEec-ccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCccccccc
Q 002995 80 QELEPGDIIWAKLT-GHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKG 147 (860)
Q Consensus 80 ~~f~~GdlVwaK~~-g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~ 147 (860)
...++||++-|+.. .--|..|+|.... .+.+.|+|..-+....|+.++|.++.+.
T Consensus 50 ~~~~~g~~c~a~~~~d~~wyRa~V~~v~-------------~~~~~V~~vDyG~~~~v~~~~l~~l~~~ 105 (218)
T 2wac_A 50 YTPKRGDLVAAQFTLDNQWYRAKVERVQ-------------GSNATVLYIDYGNKETLPTNRLAALPPA 105 (218)
T ss_dssp CCCCTTCEEEEECTTTCCEEEEEEEEEE-------------TTEEEEEETTTCCEEEEEGGGEEECCGG
T ss_pred ccCCcCCEEEEEECCCCeEEEEEEEEec-------------CCeEEEEEEecCCeEEEchHHcccCChh
Confidence 45789999999986 3568999997631 1458899988889999999999988765
No 265
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.98 E-value=19 Score=27.87 Aligned_cols=31 Identities=13% Similarity=0.281 Sum_probs=22.0
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceecccccc
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg 429 (860)
.+...|.||...-. ++.+. .|+-.||..|..
T Consensus 18 ~~~~~C~IC~~~~~---~p~~~--~CgH~fC~~Ci~ 48 (63)
T 2ysj_A 18 QEEVICPICLDILQ---KPVTI--DCGHNFCLKCIT 48 (63)
T ss_dssp CCCCBCTTTCSBCS---SCEEC--TTSSEECHHHHH
T ss_pred ccCCCCCcCCchhC---CeEEe--CCCCcchHHHHH
Confidence 34579999987533 33443 899888888875
No 266
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=25.51 E-value=22 Score=33.71 Aligned_cols=46 Identities=20% Similarity=0.556 Sum_probs=33.7
Q ss_pred CCccccccCCcccCCCeeEEcc--ccCceeccccccc-------cccCCCCceeeecccC
Q 002995 396 LDKCSVCHMDEEYQNNLFLQCD--KCRMMVHARCYGE-------LEPVNGVLWLCNLCRP 446 (860)
Q Consensus 396 ~~~C~vC~~~~~~~~n~ll~C~--~C~~~vH~~CYg~-------~~~~~~~~W~C~~C~~ 446 (860)
+..|.+|..++ .|+.|+ .|...+-..|.-. ......++|.|=.|..
T Consensus 79 ~~yC~wC~~Gg-----~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P 133 (159)
T 3a1b_A 79 QSYCTICCGGR-----EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGH 133 (159)
T ss_dssp BSSCTTTSCCS-----EEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCS
T ss_pred cceeeEecCCC-----eEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCC
Confidence 36999998754 499999 7999999999731 1123345899988874
No 267
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.50 E-value=57 Score=25.89 Aligned_cols=49 Identities=24% Similarity=0.491 Sum_probs=29.2
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccCC
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPG 447 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~~ 447 (860)
.++..|.||...-.... .+... .|+-.||..|...-... .-.|+.|+..
T Consensus 13 ~~~~~C~IC~~~~~~~~-~~~~~-~C~H~f~~~Ci~~~~~~---~~~CP~Cr~~ 61 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRD-ELGIC-PCKHAFHRKCLIKWLEV---RKVCPLCNMP 61 (74)
T ss_dssp CCSCBCSSSCCBCCSSS-CEEEE-TTTEEEEHHHHHHHHHH---CSBCTTTCCB
T ss_pred CCCCCCcCCCcccCCCC-cEEEc-CCCCEecHHHHHHHHHc---CCcCCCcCcc
Confidence 34578999998644332 23322 59999999997521111 1257777653
No 268
>2crc_A Ubiquitin conjugating enzyme 7 interacting protein 3; ZF-ranbp domain, hepatitis B virus X-associated protein 4, HBV associated factor 4; NMR {Homo sapiens}
Probab=25.40 E-value=38 Score=25.75 Aligned_cols=28 Identities=25% Similarity=0.479 Sum_probs=22.2
Q ss_pred CCCCceeeecccCCCCCCCCCccccCCC
Q 002995 434 VNGVLWLCNLCRPGAPEPPPPCCLCPVV 461 (860)
Q Consensus 434 ~~~~~W~C~~C~~~~~~~~~~C~lC~~~ 461 (860)
+++..|.|..|.+..+...+.|-.|...
T Consensus 6 ~~~~~W~Cp~CTf~N~p~~~~CemC~~p 33 (52)
T 2crc_A 6 SGPVGWQCPGCTFINKPTRPGCEMCCRA 33 (52)
T ss_dssp CCSSSBCCTTTCCCBCTTCSSCSSSCCC
T ss_pred CCCCCccCCCcccccCCCCCeeCCCCCc
Confidence 3444899999999877777889999654
No 269
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=24.71 E-value=37 Score=40.03 Aligned_cols=36 Identities=28% Similarity=0.402 Sum_probs=26.9
Q ss_pred cCCCccccccCCcccCCCeeEEccccCceecccccc
Q 002995 394 KDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYG 429 (860)
Q Consensus 394 ~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg 429 (860)
.....|++|...-..-...=+.|..|++.||..|..
T Consensus 111 ~~~~~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~ 146 (674)
T 3pfq_A 111 SSPTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVM 146 (674)
T ss_dssp SSCCCCSSSCSCCBBSSSCEECCSSSCCCBCSSTTS
T ss_pred CCCCCCCccccccchhhcCccccccCCcchhhhhhh
Confidence 345699999765332233568999999999999975
No 270
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=24.52 E-value=33 Score=34.28 Aligned_cols=55 Identities=22% Similarity=0.596 Sum_probs=37.4
Q ss_pred cccccCCCccccccCCcccCCCeeEEccccCceecccccccccc-CC-C---Cceeeeccc
Q 002995 390 RVDWKDLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEP-VN-G---VLWLCNLCR 445 (860)
Q Consensus 390 ~~~~~~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~-~~-~---~~W~C~~C~ 445 (860)
...|.++..|.+|...... .+.--.|..||..|-..|-....+ +. + ..-+|+.|.
T Consensus 155 ~~~W~~~~~C~~C~~~F~~-~~rrhhCr~CG~v~C~~Cs~~~~~~~~~~~~~~~RvC~~C~ 214 (220)
T 1dvp_A 155 APNWADGRVCHRCRVEFTF-TNRKHHCRNCGQVFCGQCTAKQCPLPKYGIEKEVRVCDGCF 214 (220)
T ss_dssp CCCCCCCSBCTTTCCBCCS-SSCCEECTTTCCEECSTTSCEEEEEGGGTEEEEEEECHHHH
T ss_pred cccCCCCCccCCCCCccCC-cccccccCCcCCEEChHHhCCeeecCcCCCCCCCEeCHHHH
Confidence 4568888899999876543 334568999999999999763221 11 1 135777774
No 271
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=24.48 E-value=27 Score=35.52 Aligned_cols=32 Identities=25% Similarity=0.530 Sum_probs=26.6
Q ss_pred CccceecCCcceeeEEcCCCCcCccccchhhhhc
Q 002995 508 KLLCSICGVSYGACIQCSNTTCRVAYHPLCARAA 541 (860)
Q Consensus 508 ~~~C~~C~~~~Ga~iqC~~~~C~~~fH~~CA~~~ 541 (860)
...|.+|+......+.|. .|...||..|....
T Consensus 180 i~~C~iC~~iv~~g~~C~--~C~~~~H~~C~~~~ 211 (238)
T 3nw0_A 180 VKICNICHSLLIQGQSCE--TCGIRMHLPCVAKY 211 (238)
T ss_dssp CCBCTTTCSBCSSCEECS--SSCCEECHHHHHHH
T ss_pred CCcCcchhhHHhCCcccC--ccChHHHHHHHHHH
Confidence 357999998766679997 59999999999654
No 272
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=24.41 E-value=19 Score=32.35 Aligned_cols=82 Identities=16% Similarity=0.270 Sum_probs=49.6
Q ss_pred CCCccccccCCcccC--CCeeEEccccCceeccccccccccCCCCceeeecccCCCC----------CCCCCccccCCCC
Q 002995 395 DLDKCSVCHMDEEYQ--NNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRPGAP----------EPPPPCCLCPVVG 462 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~--~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~~~~----------~~~~~C~lC~~~g 462 (860)
+...|.||+..-... ....+.--.|+-.+|..|...-... .-.|+.|+.... .....|.+|...-
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~---~~~CP~Cr~~~~~~~l~~l~i~~~~~~C~iC~~~~ 82 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN---ANTCPTCRKKINHKRYHPIYIGSGTVSCPICMDGY 82 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTT---CSBCTTTCCBCTTTCEEECBCSSSSCBCTTTCCBH
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHh---CCCCCCCCCcCccccccccccCCCCCCCCCCCCcc
Confidence 457899999764322 1223345589999999997532111 237999976432 2346788886421
Q ss_pred -------CCceecCCCceeccccc
Q 002995 463 -------GAMKPTTDGRWAHLACA 479 (860)
Q Consensus 463 -------Galk~t~~g~wvH~~Ca 479 (860)
.....+..|...|..|.
T Consensus 83 ~~~~~~~~~~~~~~CgH~fc~~Ci 106 (133)
T 4ap4_A 83 SEIVQNGRLIVSTECGHVFCSQCL 106 (133)
T ss_dssp HHHHHTTCCEEEETTSBEEEHHHH
T ss_pred ccccccCcceEeCCCCChhhHHHH
Confidence 12244556777777775
No 273
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=23.80 E-value=24 Score=29.79 Aligned_cols=47 Identities=17% Similarity=0.286 Sum_probs=27.5
Q ss_pred CCCccccccCCcccCCCeeEEccccCceeccccccccccCCCCceeeecccC
Q 002995 395 DLDKCSVCHMDEEYQNNLFLQCDKCRMMVHARCYGELEPVNGVLWLCNLCRP 446 (860)
Q Consensus 395 ~~~~C~vC~~~~~~~~n~ll~C~~C~~~vH~~CYg~~~~~~~~~W~C~~C~~ 446 (860)
+...|.||...-... +..+ .-.|+-.||..|...-... .-.|+.|+.
T Consensus 39 ~~~~C~IC~~~~~~~-~~~~-~l~C~H~Fh~~Ci~~wl~~---~~~CP~Cr~ 85 (91)
T 2l0b_A 39 QEMCCPICCSEYVKG-DVAT-ELPCHHYFHKPCVSIWLQK---SGTCPVCRC 85 (91)
T ss_dssp SCSEETTTTEECCTT-CEEE-EETTTEEEEHHHHHHHHTT---TCBCTTTCC
T ss_pred CCCCCcccChhhcCC-CcEE-ecCCCChHHHHHHHHHHHc---CCcCcCcCc
Confidence 456899998653322 2233 3359999999997521111 125666654
No 274
>2hqx_A P100 CO-activator tudor domain; human P100 tudor domain, proteolytic fragment, PSI, structural genomics; 1.42A {Homo sapiens} SCOP: b.34.9.1 PDB: 2hqe_A 3omc_A* 3omg_A* 2o4x_A 2e6n_A 2o4x_B
Probab=23.69 E-value=54 Score=33.13 Aligned_cols=58 Identities=12% Similarity=0.099 Sum_probs=46.2
Q ss_pred CCCCCCCCEEEEEecccCCCceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCcccccccc
Q 002995 79 CQELEPGDIIWAKLTGHAMWPAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVISFLKGL 148 (860)
Q Consensus 79 ~~~f~~GdlVwaK~~g~PwWPa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~~f~~~~ 148 (860)
....++|+++.|+...--|.-|+|.... ..+.+.|+|..-+...+|+.++|.++...+
T Consensus 63 ~~~~~~G~~c~a~~~d~~wyRa~V~~~~------------~~~~~~V~~vDyGn~~~v~~~~lr~l~~~~ 120 (246)
T 2hqx_A 63 SYAPRRGEFCIAKFVDGEWYRARVEKVE------------SPAKIHVFYIDYGNREVLPSTRLGTLSPAF 120 (246)
T ss_dssp TCCCCTTCEEEEECTTSCEEEEEEEEEE------------ETTEEEEEETTTCCEEEECGGGEECCCGGG
T ss_pred CCCCCCCCEEEEEcCCCCEEEEEEEEEc------------CCCeEEEEEEeCCCeEEEeHHHhhcCCHhH
Confidence 3457899999999864469999997631 023589999988999999999999998764
No 275
>3db3_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, tandem tudor domains, LI metal binding, DNA replication; HET: M3L; 2.40A {Homo sapiens} PDB: 3db4_A 2l3r_A*
Probab=23.55 E-value=69 Score=30.10 Aligned_cols=30 Identities=37% Similarity=0.493 Sum_probs=20.7
Q ss_pred CCCceeeeeeeecC------------------CCCceEEEecCCCccc
Q 002995 1 MQDWYSGFVVGYDS------------------ESNRHHVKYVDGDEED 30 (860)
Q Consensus 1 ~~~~~~g~v~~~~~------------------~~~~h~~~y~d~d~e~ 30 (860)
|-+||.+.|+.=-. +.=..||+|||-.++-
T Consensus 24 ~GAWFEA~Iv~Vtr~~~~~~~p~~s~~~~~~~edviYhVkyddype~g 71 (161)
T 3db3_A 24 MGAWFEAQVVRVTRKAPSRDEPCSSTSRPALEEDVIYHVKYDDYPENG 71 (161)
T ss_dssp TCCEEEEEEEEEEEC-----------------CCEEEEEEESSCGGGC
T ss_pred CCcceEEEEEEEEecCCCCCCcccccccCCCcCceEEEEEeccCccCC
Confidence 56899999988322 2236899998865443
No 276
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=23.33 E-value=43 Score=37.11 Aligned_cols=24 Identities=17% Similarity=0.386 Sum_probs=20.2
Q ss_pred ccCeeEEeeecCCCCCEEEEecCE
Q 002995 705 IHGFGIFAKHPHRAGDMVIEYTGE 728 (860)
Q Consensus 705 ~~G~GvfA~~~i~~g~~I~ey~Ge 728 (860)
..|+||+|+++|++|+.|+...-.
T Consensus 31 ~~GrGl~A~~~I~~ge~ll~IP~~ 54 (440)
T 2h21_A 31 TEGLGLVALKDISRNDVILQVPKR 54 (440)
T ss_dssp TTEEEEEESSCBCTTEEEEEEEGG
T ss_pred CCCCEEEEcccCCCCCEEEEeChh
Confidence 369999999999999999875443
No 277
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=22.04 E-value=27 Score=23.59 Aligned_cols=24 Identities=29% Similarity=0.602 Sum_probs=17.0
Q ss_pred CceeeecccCCCCCCCCCccccCC
Q 002995 437 VLWLCNLCRPGAPEPPPPCCLCPV 460 (860)
Q Consensus 437 ~~W~C~~C~~~~~~~~~~C~lC~~ 460 (860)
.+|.|..|....-.....|.-|..
T Consensus 4 gDW~C~~C~~~Nfa~r~~C~~C~~ 27 (32)
T 2lk0_A 4 EDWLCNKCCLNNFRKRLKCFRCGA 27 (32)
T ss_dssp SEEECTTTCCEEETTCCBCTTTCC
T ss_pred CCCCcCcCcCCcChhcceecCCCC
Confidence 389999998754444557887764
No 278
>3a9j_C Mitogen-activated protein kinase kinase kinase 7- interacting protein 2; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 2wwz_C 2wx0_C 2wx1_C 3a9k_C
Probab=21.57 E-value=34 Score=23.32 Aligned_cols=25 Identities=24% Similarity=0.565 Sum_probs=19.9
Q ss_pred CCceeeecccCCCCCCCCCccccCC
Q 002995 436 GVLWLCNLCRPGAPEPPPPCCLCPV 460 (860)
Q Consensus 436 ~~~W~C~~C~~~~~~~~~~C~lC~~ 460 (860)
+..|-|..|.+........|..|..
T Consensus 6 ~~~W~C~~CT~~N~~~~~~Ce~C~~ 30 (34)
T 3a9j_C 6 GAQWNCTACTFLNHPALIRCEQCEM 30 (34)
T ss_dssp CCCEECTTTCCEECTTCSBCTTTCC
T ss_pred CCcCCCCCCccccCCCCCeeCCCCC
Confidence 3489999999876666778988864
No 279
>3gj5_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1
Probab=21.45 E-value=28 Score=24.04 Aligned_cols=25 Identities=20% Similarity=0.579 Sum_probs=18.8
Q ss_pred CCceeeecccCCCCCCCCCccccCC
Q 002995 436 GVLWLCNLCRPGAPEPPPPCCLCPV 460 (860)
Q Consensus 436 ~~~W~C~~C~~~~~~~~~~C~lC~~ 460 (860)
...|-|+.|..........|+-|..
T Consensus 5 ~G~W~C~~C~v~N~~~~~kC~aCet 29 (34)
T 3gj5_B 5 SGSWDCEVCLVQNKADSTKCIACES 29 (34)
T ss_dssp -CCEECTTTCCEECSSCSBCTTTCC
T ss_pred CCceECCeeEeECccccCEEcccCC
Confidence 3489999998766656678998853
No 280
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.16 E-value=57 Score=24.84 Aligned_cols=26 Identities=23% Similarity=0.614 Sum_probs=21.2
Q ss_pred CCceeeecccCCCCCCCCCccccCCC
Q 002995 436 GVLWLCNLCRPGAPEPPPPCCLCPVV 461 (860)
Q Consensus 436 ~~~W~C~~C~~~~~~~~~~C~lC~~~ 461 (860)
...|-|..|.+........|..|...
T Consensus 9 ~~~W~C~~CT~~N~~~~~~C~~C~~p 34 (53)
T 2d9g_A 9 EGYWDCSVCTFRNSAEAFKCMMCDVR 34 (53)
T ss_dssp CCCEECSSSCCEECSSCSSCSSSCCC
T ss_pred CCCcCCCCCccCCCCCCCccCCCCCc
Confidence 34899999999777677899999754
No 281
>1ssf_A Transformation related protein 53 binding protein 1; tudor domains, tandem, SH3-like fold, beta barrel, alpha- helix, cell cycle; NMR {Mus musculus} SCOP: b.34.9.1 b.34.9.1
Probab=20.78 E-value=99 Score=28.86 Aligned_cols=47 Identities=13% Similarity=0.121 Sum_probs=36.0
Q ss_pred CCCCEEEEEecccCCC-ceEeeCCCCcCccccccccCCCCcEEEEEeCCCCEEEEeCCCcc
Q 002995 83 EPGDIIWAKLTGHAMW-PAIVVDESLIGDYKGLNKISGGRSIPVQFFGTHDFARINVKQVI 142 (860)
Q Consensus 83 ~~GdlVwaK~~g~PwW-Pa~V~~~~~~~~~~~~~~~~~~~~~~V~FFg~~~~awv~~~~l~ 142 (860)
.+|.-|+||...-..| ||.|... .+++.|.|.|. |....-|..++|.
T Consensus 10 ~iG~rVfArWsd~~yyYpG~V~~~------------~~~~~Y~V~Fd-DG~~k~v~~~div 57 (156)
T 1ssf_A 10 FVGLRVVAKWSSNGYFYSGKITRD------------VGAGKYKLLFD-DGYECDVLGKDIL 57 (156)
T ss_dssp STTCEEEECSSCSSEEEEEEEEEC------------CTTTEEEEECT-TSCEEEEETTTEE
T ss_pred hhccEEEEEcCCCCcccccEEEEe------------ccCCEEEEEEc-CCCeeEeeccceE
Confidence 6999999999999999 9999752 23455888887 6666777755554
No 282
>2ebr_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.77 E-value=73 Score=23.66 Aligned_cols=24 Identities=25% Similarity=0.623 Sum_probs=19.9
Q ss_pred CceeeecccCCCCCCCCCccccCC
Q 002995 437 VLWLCNLCRPGAPEPPPPCCLCPV 460 (860)
Q Consensus 437 ~~W~C~~C~~~~~~~~~~C~lC~~ 460 (860)
..|-|..|..........|+-|..
T Consensus 10 gsW~C~~C~v~N~a~~~kC~aC~~ 33 (47)
T 2ebr_A 10 GSWDCELCLVQNKADSTKCLACES 33 (47)
T ss_dssp SSCCCSSSCCCCCSSCSBCSSSCC
T ss_pred CeeECCeeecCCcCCcceecCcCC
Confidence 489999999876667789999964
No 283
>1igq_A Transcriptional repressor protein KORB; SH3 domain, dimerization domain; 1.70A {Escherichia coli} SCOP: b.34.1.3 PDB: 1igu_A
Probab=20.34 E-value=96 Score=24.34 Aligned_cols=28 Identities=25% Similarity=0.354 Sum_probs=20.1
Q ss_pred CCCceEEEecC-CCccccccccceEEEEE
Q 002995 15 ESNRHHVKYVD-GDEEDLILSNERIKFYI 42 (860)
Q Consensus 15 ~~~~h~~~y~d-~d~e~~~l~~e~i~~~~ 42 (860)
..+.=.|||+| |.+.+++|.+=.+...+
T Consensus 32 ~~G~~wiKyED~G~e~E~d~~~v~l~al~ 60 (62)
T 1igq_A 32 AEGYAWLKYEDDGQEFEANLADVKLVALI 60 (62)
T ss_dssp STTEEEEEETTTCCEEEEEGGGCEEEEEE
T ss_pred cCceEEEEEecCCcEEEEeccceEEEeee
Confidence 45667899999 88888888765544443
Done!