BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002996
(860 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81742|APBLC_ARATH Beta-adaptin-like protein C OS=Arabidopsis thaliana GN=BETAC-AD
PE=1 SV=2
Length = 893
Score = 1483 bits (3840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 738/862 (85%), Positives = 784/862 (90%), Gaps = 13/862 (1%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP
Sbjct: 43 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 102
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLCDPLQ+CLKDDDPYVRKTAAICVAKL+DINAELVEDRG
Sbjct: 103 LIRALAVRTMGCIRVDKITEYLCDPLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRG 162
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
FLE+LKDLISDNNPMVVANAVAALAEI+ENS+ PIFEI S L+KLLTALNECTEWGQVF
Sbjct: 163 FLEALKDLISDNNPMVVANAVAALAEIQENSTSPIFEINSTILTKLLTALNECTEWGQVF 222
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSA--MILQQMELITSTDVVRNLCK 238
ILDALSRYKA+D REAENIVERVTPRLQHANCAVVLSA MILQQMELITSTDV+RNLCK
Sbjct: 223 ILDALSRYKASDPREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCK 282
Query: 239 KMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 298
KMAPPLVTLLSAEPEIQYVALRNINLIVQ+RPTILAHEIKVFFCKYNDPIYVKMEKLEIM
Sbjct: 283 KMAPPLVTLLSAEPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 342
Query: 299 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 358
IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK
Sbjct: 343 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 402
Query: 359 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 418
VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA
Sbjct: 403 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 462
Query: 419 DELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD 478
DELLESFLE+FPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD
Sbjct: 463 DELLESFLENFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD 522
Query: 479 RAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAF 538
RAYIYWRLLSTDPEAAKDVVLAEKPVI+DDSNQLDPSLLDELLANI+TLSSVYHKPPEAF
Sbjct: 523 RAYIYWRLLSTDPEAAKDVVLAEKPVITDDSNQLDPSLLDELLANISTLSSVYHKPPEAF 582
Query: 539 VTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADEGASPQTSSSNAPYAATRQPAPPPAAP 598
VTR+KTT +T+DEDY GSE GY +A + D ASP S+ Y AP
Sbjct: 583 VTRLKTTVQKTEDEDYVEGSETGYPEASGNPVDGAASP---SATTGYVTKLAAAP----- 634
Query: 599 VSPPVPDLLGDLIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQV 658
PVPDLLGDL+G DN AAIVP D+ LPVVLPAS GQGLQI A+LTRQDGQV
Sbjct: 635 --APVPDLLGDLMGSDN-AAIVPVDEPTTPSGRPLPVVLPASKGQGLQISAQLTRQDGQV 691
Query: 659 FYSMLFENNTQTPLDGFMIQFNKNTFGLAAGGALQVPQLQPGTSGRTLLPMVLFQNMSAG 718
FYSML ENN+Q+ LDGFMIQFNKN+FGLAA G+LQVP LQPG S RT++PMVL QNMS G
Sbjct: 692 FYSMLLENNSQSLLDGFMIQFNKNSFGLAAVGSLQVPPLQPGASARTMMPMVLSQNMSTG 751
Query: 719 PPSSLLQVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPG 778
SS+LQVAVKNNQQPVWYF DKI L+ LF+EDGRMERG+FLETW+SLPDSNEV K+ PG
Sbjct: 752 STSSVLQVAVKNNQQPVWYFEDKIVLNALFSEDGRMERGTFLETWKSLPDSNEVQKEFPG 811
Query: 779 VVVSNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKCA 838
+ +++VE+TLDLLAASNMFFIAKRKN NQDV Y SAK+P G+PFLIELT ++G PG+KCA
Sbjct: 812 ITITSVESTLDLLAASNMFFIAKRKNGNQDVLYLSAKVPRGIPFLIELTAIVGQPGLKCA 871
Query: 839 IKTPNPDIASLFFEAIETLLKA 860
+KTP P+IA LFFEA+E L KA
Sbjct: 872 VKTPTPEIAPLFFEAVEILFKA 893
>sp|Q9SUS3|APBLB_ARATH Beta-adaptin-like protein B OS=Arabidopsis thaliana GN=BETAB-AD
PE=1 SV=1
Length = 894
Score = 1464 bits (3789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 746/862 (86%), Positives = 789/862 (91%), Gaps = 12/862 (1%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP
Sbjct: 43 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 102
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLCDPLQ+CLKDDDPYVRKTAAICVAKL+DINAELVEDRG
Sbjct: 103 LIRALAVRTMGCIRVDKITEYLCDPLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRG 162
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
FLE+LKDLISDNNPMVVANAVAALAEI+ENSS PIFEI S TL+KLLTALNECTEWGQVF
Sbjct: 163 FLEALKDLISDNNPMVVANAVAALAEIQENSSSPIFEINSTTLTKLLTALNECTEWGQVF 222
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSA--MILQQMELITSTDVVRNLCK 238
ILDALS+YKAAD REAENIVERVTPRLQHANCAVVLSA MILQQMELITSTDV+RNLCK
Sbjct: 223 ILDALSKYKAADPREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCK 282
Query: 239 KMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 298
KMAPPLVTLLSAEPEIQYVALRNINLIVQ+RPTILAHEIKVFFCKYNDPIYVKMEKLEIM
Sbjct: 283 KMAPPLVTLLSAEPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 342
Query: 299 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 358
IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK
Sbjct: 343 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 402
Query: 359 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 418
VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA
Sbjct: 403 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 462
Query: 419 DELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD 478
DELLESFLE+FPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD
Sbjct: 463 DELLESFLENFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD 522
Query: 479 RAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAF 538
RAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELL NI+TLSSVYHKPPEAF
Sbjct: 523 RAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLTNISTLSSVYHKPPEAF 582
Query: 539 VTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADEGASPQTSSSNAPYAATRQPAPPPAAP 598
VTR+KTT +T+DED+ GSE GYS ++ D ASP N P + RQPAP AP
Sbjct: 583 VTRLKTTVQKTEDEDFAEGSEAGYSS--SNPVDSAASP---PGNIPQPSGRQPAPAVPAP 637
Query: 599 VSPPVPDLLGDLIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQV 658
V DLLGDL+GLDN AAIVP D P LPVV+PAS+GQGLQI A+L+R+DGQV
Sbjct: 638 VP----DLLGDLMGLDN-AAIVPVDDPITQSGPPLPVVVPASSGQGLQISAQLSRKDGQV 692
Query: 659 FYSMLFENNTQTPLDGFMIQFNKNTFGLAAGGALQVPQLQPGTSGRTLLPMVLFQNMSAG 718
FYSMLFENN+Q+ LDGFMIQFNKNTFGLAA G+LQ+P L P TS RT+LPMVLFQNMSAG
Sbjct: 693 FYSMLFENNSQSVLDGFMIQFNKNTFGLAAAGSLQIPPLHPATSARTMLPMVLFQNMSAG 752
Query: 719 PPSSLLQVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPG 778
PPSSLLQVAVKNNQQPVWYF DKI LH LF EDGRMERG+FLETWRSLPDSNEVLK+ PG
Sbjct: 753 PPSSLLQVAVKNNQQPVWYFTDKIILHALFGEDGRMERGTFLETWRSLPDSNEVLKEFPG 812
Query: 779 VVVSNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKCA 838
+ +++VE+T++LL A NMFFIAKRKN NQDV Y SAK P VPFLIELT ++G PG+KCA
Sbjct: 813 ITITSVESTIELLTAFNMFFIAKRKNGNQDVIYLSAKDPRDVPFLIELTAMVGQPGLKCA 872
Query: 839 IKTPNPDIASLFFEAIETLLKA 860
+KTP P+IA LFFEA+E L KA
Sbjct: 873 VKTPTPEIAPLFFEALELLFKA 894
>sp|O35643|AP1B1_MOUSE AP-1 complex subunit beta-1 OS=Mus musculus GN=Ap1b1 PE=1 SV=2
Length = 943
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/911 (57%), Positives = 641/911 (70%), Gaps = 61/911 (6%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEI-EENSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD+NPMVVANAVAAL+EI E + S + ++ +++KLLTALNECTEWGQ+
Sbjct: 161 FLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAM--ILQQMELITST-DVVRNL 236
FILD L+ Y D REA++I ERVTPRL HAN AVVLSA+ +++ ME+++ D L
Sbjct: 221 FILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATL 280
Query: 237 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 296
KK+APPLVTLLSAEPE+QYVALRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 297 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 356
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 357 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 416
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 417 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 476
NADELLESFLE F +E QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTET-QELVQQVLSLATQDSDNPDL 519
Query: 477 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 536
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ I TL+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPN 579
Query: 537 AFVT------------RVKTTASRTDDEDYPNGSEQGYSDAPTHVADEGASPQTSSSNAP 584
AFV R ++ S E P G+ G D P + +G +
Sbjct: 580 AFVEGGRGVVHKSLPPRTASSESTESPETAPAGAPAG--DQPDVIPAQGDLLGDLLNLDL 637
Query: 585 YAATRQPAPPPAAPVSPPVPDLLG----DLIGLDNSAAI--------------VPADQA- 625
P P A+ V DLLG LIG N A P
Sbjct: 638 GPPVSGP-PLAASSVQMGAVDLLGGGLDSLIGDSNFGAPSASVAAAPAPARLGAPISSGL 696
Query: 626 -------------AASPVPALPVVLPASTGQGLQIGAELTRQDGQVFYSMLFENNTQTPL 672
+ S V V LPA +GL+I TRQ G + + N +
Sbjct: 697 SDLFDLTSGVGTLSGSYVAPKAVWLPAMKAKGLEISGTFTRQAGSISMDLQLTNKALQVM 756
Query: 673 DGFMIQFNKNTFGLAAGGALQVP-QLQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAVKNN 731
F IQFN+N+FGLA LQV L P + LP+ ++ P + LQVAVKNN
Sbjct: 757 TDFAIQFNRNSFGLAPAAPLQVHVPLSPNQTVEISLPLNTVGSVLKMEPLNNLQVAVKNN 816
Query: 732 QQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEV---LKDLPGVVVSNVEATL 788
V+YF+ LHVLF EDG+M+R FL TW+ + + NE ++D P N EA
Sbjct: 817 ID-VFYFSTLYPLHVLFVEDGKMDRQMFLATWKDIANENEAQFQIRDCP----LNTEAAS 871
Query: 789 DLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKCAIKTPNPDIAS 848
+ L +SN+F +AKR QD+ Y S K+ G+ L EL GNP ++K P+++
Sbjct: 872 NKLQSSNIFTVAKRNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSFTLSLKCRAPEVSQ 931
Query: 849 LFFEAIETLLK 859
++A ET+LK
Sbjct: 932 HVYQAYETILK 942
>sp|Q10567|AP1B1_HUMAN AP-1 complex subunit beta-1 OS=Homo sapiens GN=AP1B1 PE=1 SV=2
Length = 949
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/921 (56%), Positives = 649/921 (70%), Gaps = 75/921 (8%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEI-EENSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD+NPMVVANAVAAL+EI E + S + ++ +++KLLTALNECTEWGQ+
Sbjct: 161 FLDTLKDLISDSNPMVVANAVAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAM--ILQQMELITST-DVVRNL 236
FILD L+ Y D REA++I ERVTPRL HAN AVVLSA+ +++ ME+++ D L
Sbjct: 221 FILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTL 280
Query: 237 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 296
KK+APPLVTLLSAEPE+QYVALRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 297 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 356
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 357 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 416
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 417 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 476
NADELLESFLE F +E QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTET-QELVQQVLSLATQDSDNPDL 519
Query: 477 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 536
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ I TL+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPS 579
Query: 537 AFVT------------RVKTTASRTDDEDYPNGSEQGYSDAPTHVADEG----------- 573
AFV R ++ S E P G+ G + P + +G
Sbjct: 580 AFVEGGRGVVHKSLPPRTASSESAESPETAPTGAPPG--EQPDVIPAQGDLLGDLLNLDL 637
Query: 574 ----ASPQTSSSNAPYAA---------------------TRQPAPPPA---APVSPPVPD 605
+ P ++S+ A T APP A A + P+
Sbjct: 638 GPPVSGPPLATSSVQMGAVDLLGGGLDSLMGDEPEGIGGTNFVAPPTAAVPANLGAPIGS 697
Query: 606 LLGDLIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQVFYSMLFE 665
L DL L + + + S V V LPA +GL+I TRQ G + +
Sbjct: 698 GLSDLFDLTSGVGTL-----SGSYVAPKAVWLPAMKAKGLEISGTFTRQVGSISMDLQLT 752
Query: 666 NNTQTPLDGFMIQFNKNTFGLAAGGALQVPQ-LQPGTSGRTLLPMVLFQNMSAGPPSSLL 724
N + F IQFN+N+FGLA LQV L P + LP+ ++ P + L
Sbjct: 753 NKALQVMTDFAIQFNRNSFGLAPATPLQVHAPLSPNQTVEISLPLSTVGSVMKMEPLNNL 812
Query: 725 QVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEV---LKDLPGVVV 781
QVAVKNN V+YF+ LH+LF EDG+M+R FL TW+ +P+ NE ++D P
Sbjct: 813 QVAVKNNID-VFYFSTLYPLHILFVEDGKMDRQMFLATWKDIPNENEAQFQIRDCP---- 867
Query: 782 SNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPG---VKCA 838
N EA L +SN+F +AKR QD+ Y S K+ G+ L EL GNP ++ +
Sbjct: 868 LNAEAASSKLQSSNIFTVAKRNVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSCTDLELS 927
Query: 839 IKTPNPDIASLFFEAIETLLK 859
+K P+++ ++A ET+LK
Sbjct: 928 LKCRAPEVSQHVYQAYETILK 948
>sp|P63009|AP2B1_BOVIN AP-2 complex subunit beta OS=Bos taurus GN=AP2B1 PE=1 SV=2
Length = 937
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/911 (55%), Positives = 634/911 (69%), Gaps = 67/911 (7%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENS-SRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D+NPMVVANAVAAL+EI E+ + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAM--ILQQMELI-TSTDVVRNL 236
FILD LS Y D REA++I ERVTPRL HAN AVVLSA+ +++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNML 280
Query: 237 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 296
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 297 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 356
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 357 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 416
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 417 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 476
NADELLESFLE F +E QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSET-QELVQQVLSLATQDSDNPDL 519
Query: 477 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 536
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 537 AFV--------TRVKTTASRTDDEDYPNGSEQGYS-DAPTHVADEGAS------------ 575
AFV + TD D P G+ + + P + +G
Sbjct: 580 AFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTTATNLEQPQVIPSQGDLLGDLLNLDLGPP 639
Query: 576 ---PQTSS-----------------------SNAPYAATRQPAPPPAAPVSPPVPDLLGD 609
PQ SS S+ P AT P+P PA V L D
Sbjct: 640 VNVPQVSSMQMGAVDLLGGGLDSLVGQSFIPSSVP--ATFAPSPTPAV-----VSSGLND 692
Query: 610 LIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQVFYSMLFENNTQ 669
L L + P A V LPA +GL+I T + G ++ M F N
Sbjct: 693 LFELSTGIGMAPGGYVAPK-----AVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKAL 747
Query: 670 TPLDGFMIQFNKNTFGLAAGGALQVPQ-LQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAV 728
+ F IQFNKN+FG+ L + L P S LP+ + P + LQVAV
Sbjct: 748 QHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAV 807
Query: 729 KNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPGVVVSNVEATL 788
KNN V+YF+ I L+VLF EDG+MER FL TW+ +P+ NE+ + + N +
Sbjct: 808 KNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHL-NADTVS 865
Query: 789 DLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKCAIKTPNPDIAS 848
L +N++ IAKR QD+ Y S K+ G+ L EL GNP ++K P+++
Sbjct: 866 SKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQ 925
Query: 849 LFFEAIETLLK 859
++ +++LK
Sbjct: 926 YIYQVYDSILK 936
>sp|P62944|AP2B1_RAT AP-2 complex subunit beta OS=Rattus norvegicus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/911 (55%), Positives = 634/911 (69%), Gaps = 67/911 (7%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENS-SRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D+NPMVVANAVAAL+EI E+ + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAM--ILQQMELI-TSTDVVRNL 236
FILD LS Y D REA++I ERVTPRL HAN AVVLSA+ +++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNML 280
Query: 237 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 296
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 297 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 356
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 357 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 416
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 417 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 476
NADELLESFLE F +E QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSET-QELVQQVLSLATQDSDNPDL 519
Query: 477 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 536
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 537 AFV--------TRVKTTASRTDDEDYPNGSEQGYS-DAPTHVADEGAS------------ 575
AFV + TD D P G+ + + P + +G
Sbjct: 580 AFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTTATNLEQPQVIPSQGDLLGDLLNLDLGPP 639
Query: 576 ---PQTSS-----------------------SNAPYAATRQPAPPPAAPVSPPVPDLLGD 609
PQ SS S+ P AT P+P PA V L D
Sbjct: 640 VNVPQVSSMQMGAVDLLGGGLDSLVGQSFIPSSVP--ATFAPSPTPAV-----VSSGLND 692
Query: 610 LIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQVFYSMLFENNTQ 669
L L + P A V LPA +GL+I T + G ++ M F N
Sbjct: 693 LFELSTGIGMAPGGYVAPK-----AVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKAL 747
Query: 670 TPLDGFMIQFNKNTFGLAAGGALQVPQ-LQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAV 728
+ F IQFNKN+FG+ L + L P S LP+ + P + LQVAV
Sbjct: 748 QHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAV 807
Query: 729 KNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPGVVVSNVEATL 788
KNN V+YF+ I L+VLF EDG+MER FL TW+ +P+ NE+ + + N +
Sbjct: 808 KNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHL-NADTVS 865
Query: 789 DLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKCAIKTPNPDIAS 848
L +N++ IAKR QD+ Y S K+ G+ L EL GNP ++K P+++
Sbjct: 866 SKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQ 925
Query: 849 LFFEAIETLLK 859
++ +++LK
Sbjct: 926 YIYQVYDSILK 936
>sp|P63010|AP2B1_HUMAN AP-2 complex subunit beta OS=Homo sapiens GN=AP2B1 PE=1 SV=1
Length = 937
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/911 (55%), Positives = 634/911 (69%), Gaps = 67/911 (7%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENS-SRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D+NPMVVANAVAAL+EI E+ + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAM--ILQQMELI-TSTDVVRNL 236
FILD LS Y D REA++I ERVTPRL HAN AVVLSA+ +++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNML 280
Query: 237 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 296
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 297 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 356
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 357 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 416
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 417 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 476
NADELLESFLE F +E QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSET-QELVQQVLSLATQDSDNPDL 519
Query: 477 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 536
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 537 AFV--------TRVKTTASRTDDEDYPNGSEQGYS-DAPTHVADEGAS------------ 575
AFV + TD D P G+ + + P + +G
Sbjct: 580 AFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTTATNLEQPQVIPSQGDLLGDLLNLDLGPP 639
Query: 576 ---PQTSS-----------------------SNAPYAATRQPAPPPAAPVSPPVPDLLGD 609
PQ SS S+ P AT P+P PA V L D
Sbjct: 640 VNVPQVSSMQMGAVDLLGGGLDSLVGQSFIPSSVP--ATFAPSPTPAV-----VSSGLND 692
Query: 610 LIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQVFYSMLFENNTQ 669
L L + P A V LPA +GL+I T + G ++ M F N
Sbjct: 693 LFELSTGIGMAPGGYVAPK-----AVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKAL 747
Query: 670 TPLDGFMIQFNKNTFGLAAGGALQVPQ-LQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAV 728
+ F IQFNKN+FG+ L + L P S LP+ + P + LQVAV
Sbjct: 748 QHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAV 807
Query: 729 KNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPGVVVSNVEATL 788
KNN V+YF+ I L+VLF EDG+MER FL TW+ +P+ NE+ + + N +
Sbjct: 808 KNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHL-NADTVS 865
Query: 789 DLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKCAIKTPNPDIAS 848
L +N++ IAKR QD+ Y S K+ G+ L EL GNP ++K P+++
Sbjct: 866 SKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQ 925
Query: 849 LFFEAIETLLK 859
++ +++LK
Sbjct: 926 YIYQVYDSILK 936
>sp|Q9DBG3|AP2B1_MOUSE AP-2 complex subunit beta OS=Mus musculus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/911 (55%), Positives = 634/911 (69%), Gaps = 67/911 (7%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENS-SRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D+NPMVVANAVAAL+EI E+ + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAM--ILQQMELI-TSTDVVRNL 236
FILD LS Y D REA++I ERVTPRL HAN AVVLSA+ +++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNML 280
Query: 237 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 296
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 297 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 356
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 357 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 416
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 417 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 476
NADELLESFLE F +E QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSET-QELVQQVLSLATQDSDNPDL 519
Query: 477 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 536
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 537 AFV--------TRVKTTASRTDDEDYPNGSEQGYS-DAPTHVADEGAS------------ 575
AFV + TD D P G+ + + P + +G
Sbjct: 580 AFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTTTTNLEQPQVIPSQGDLLGDLLNLDLGPP 639
Query: 576 ---PQTSS-----------------------SNAPYAATRQPAPPPAAPVSPPVPDLLGD 609
PQ SS S+ P AT P+P PA V L D
Sbjct: 640 VNVPQVSSMQMGAVDLLGGGLDSLVGQSFIPSSVP--ATFAPSPTPAV-----VSSGLND 692
Query: 610 LIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQVFYSMLFENNTQ 669
L L + P A V LPA +GL+I T + G ++ M F N
Sbjct: 693 LFELSTGIGMAPGGYVAPK-----AVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKAL 747
Query: 670 TPLDGFMIQFNKNTFGLAAGGALQVPQ-LQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAV 728
+ F IQFNKN+FG+ L + L P S LP+ + P + LQVAV
Sbjct: 748 QHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAV 807
Query: 729 KNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPGVVVSNVEATL 788
KNN V+YF+ I L+VLF EDG+MER FL TW+ +P+ NE+ + + N +
Sbjct: 808 KNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHL-NADTVS 865
Query: 789 DLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKCAIKTPNPDIAS 848
L +N++ IAKR QD+ Y S K+ G+ L EL GNP ++K P+++
Sbjct: 866 SKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQ 925
Query: 849 LFFEAIETLLK 859
++ +++LK
Sbjct: 926 YIYQVYDSILK 936
>sp|Q08DS7|AP1B1_BOVIN AP-1 complex subunit beta-1 OS=Bos taurus GN=AP2B1 PE=2 SV=1
Length = 951
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/919 (54%), Positives = 629/919 (68%), Gaps = 69/919 (7%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVN+FVKD +DPNP
Sbjct: 41 MTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA++VED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENS-SRPIFEITSHTLSKLLTALNECTEWGQV 179
FL+SL+DLI+D+NPMVVANAVAAL+EI E+ + + ++ ++KLLTALNECTEWGQ+
Sbjct: 161 FLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAM--ILQQMELI-TSTDVVRNL 236
FILD LS Y D REA++I ERVTPRL HAN AVVLSA+ +++ +EL+ +D L
Sbjct: 221 FILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNML 280
Query: 237 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 296
KK+APPLVTLLS EPE+QYVALRNINLIVQ+RP IL EIKVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLD 340
Query: 297 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 356
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 357 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 416
KVNYVVQEAI+VI+DIFR+YPN YESIIATLCE+LD+LDEP+A+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERID 460
Query: 417 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 476
NADELLESFLE F +E QVQL LLTA VKLFLKKP+E Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSET-QELVQQVLSLATQDSDNPDL 519
Query: 477 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 536
RDR YIYWRLLSTDP AK+VVL+EKP+IS++++ ++P+LLDEL+ +I +L+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPN 579
Query: 537 AFVTRVKTTASRTDDEDYPNGSEQGYSDAPTHVADEGASPQTSSS--------------- 581
AFV R + ++ G S T A PQ S
Sbjct: 580 AFVEG-SHGIHRKHLPIHHGSTDAGDSPVGTTTATNLEQPQVIPSQGDLLGDLLNLDLGP 638
Query: 582 --NAPYAATRQ----------------------------------PAPPPAAPVSPPVPD 605
N P ++ Q P+ PA P P
Sbjct: 639 PVNVPQVSSMQMGAVDLLGGGLDSLLGSDLGGGIGGSPAVGQSFIPSSVPATFAPSPTPA 698
Query: 606 L----LGDLIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQVFYS 661
+ L DL L + P A V LPA +GL+I T + G ++
Sbjct: 699 VVSSGLNDLFELSTGIGMAPGGYVAPK-----AVWLPAVKAKGLEISGTFTHRQGHIYME 753
Query: 662 MLFENNTQTPLDGFMIQFNKNTFGLAAGGALQVPQ-LQPGTSGRTLLPMVLFQNMSAGPP 720
M F N + F IQFNKN+FG+ L + L P S LP+ + P
Sbjct: 754 MNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEP 813
Query: 721 SSLLQVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEVLKDLPGVV 780
+ LQVAVKNN V+YF+ I L+VLF EDG+MER FL TW+ +P+ NE+ +
Sbjct: 814 LNNLQVAVKNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECH 872
Query: 781 VSNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKCAIK 840
+ N + L +N++ IAKR QD+ Y S K+ G+ L EL GNP ++K
Sbjct: 873 L-NADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLK 931
Query: 841 TPNPDIASLFFEAIETLLK 859
P+++ ++ +++LK
Sbjct: 932 CRAPEVSQYIYQVYDSILK 950
>sp|Q54X82|AP1B_DICDI AP-1 complex subunit beta OS=Dictyostelium discoideum GN=ap1b1 PE=3
SV=1
Length = 942
Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/550 (73%), Positives = 475/550 (86%), Gaps = 3/550 (0%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS LFT V+NCMQT NLELKKLVYLY++NYAK+ PD AILAVNTF KD+ DPNP
Sbjct: 41 MTVGKDVSMLFTHVLNCMQTHNLELKKLVYLYVMNYAKNHPDRAILAVNTFQKDASDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVD ITE+LC+PL+ LKD DPYVRKTAA+CVAKLYD+N ELVE++G
Sbjct: 101 LIRALAVRTMGCIRVDNITEHLCEPLRHALKDQDPYVRKTAAVCVAKLYDVNPELVENQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
FL L DL+ D+NPMVVANAVA+L EI+E S + +F I S L+KLL ALNECTEWGQVF
Sbjct: 161 FLNILNDLLGDSNPMVVANAVASLTEIDEVSKKEVFRIHSGNLNKLLAALNECTEWGQVF 220
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAM--ILQQMELITSTDVVRNLCK 238
IL++L +Y D++EAEN+ ERV PRLQHAN AVVLSA+ +++ M I + DV+R CK
Sbjct: 221 ILNSLCKYTPRDSQEAENVCERVAPRLQHANSAVVLSAVKVLMKYMNSIGNNDVIRLFCK 280
Query: 239 KMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 298
KMAPPLVTLLS EPEIQ++ LRNINLIVQ+RP IL +E+KVFFCKYNDPIYVKMEKLEIM
Sbjct: 281 KMAPPLVTLLSKEPEIQFLGLRNINLIVQKRPEILQYEMKVFFCKYNDPIYVKMEKLEIM 340
Query: 299 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 358
I LA+++NI++VLLEFKEYATE+DV+FVRKAVRAIGRCAIK++RA+ERCI VLL+LI+ K
Sbjct: 341 IMLANEKNIEEVLLEFKEYATEIDVEFVRKAVRAIGRCAIKIDRASERCIQVLLDLIQTK 400
Query: 359 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 418
VNYVVQEAIIVIKDIFR+YPN YE IIATLC +L++LDEPEAKASMIWIIGEYAERIDNA
Sbjct: 401 VNYVVQEAIIVIKDIFRKYPNKYEGIIATLCANLESLDEPEAKASMIWIIGEYAERIDNA 460
Query: 419 DELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD 478
ELL SFLE F +E +QVQLQLLT+ VKLFLK+P + QQM+Q VLN +T E+DNPDLRD
Sbjct: 461 HELLNSFLEGFKDENSQVQLQLLTSIVKLFLKRPKDA-QQMVQTVLNLSTQESDNPDLRD 519
Query: 479 RAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAF 538
R ++YWRLLSTD EAAK VVL+EKP+I+D ++ LD SLL+EL+ NI+TL+SVYHKPPE F
Sbjct: 520 RGFVYWRLLSTDFEAAKAVVLSEKPLITDTTSHLDESLLNELILNISTLASVYHKPPETF 579
Query: 539 VTRVKTTASR 548
VT++K R
Sbjct: 580 VTKLKGLNKR 589
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 116/230 (50%), Gaps = 10/230 (4%)
Query: 635 VVLPASTGQGLQIGAELTRQDGQVFYSMLFENNTQTPLDGFMIQFNKNTFGLA-AGGALQ 693
VV Q +QI TR G++ + N +Q + F IQF +N+FG++ A L
Sbjct: 713 VVFGGDRSQAIQISGAFTRFQGRINLELNLLNTSQQGMSKFKIQFYQNSFGISPADQILS 772
Query: 694 VPQLQPGTSGRTLLPMVLFQNMSAGPPSSLLQVAVKN-NQQPVWYFNDKISLHVLFTEDG 752
++ G S +P+ +S P + ++ +A+ Q +YF L L TE G
Sbjct: 773 CGAIEVGQSTDVTIPISCNGQIS-NPLNPVIDMAMMVLPSQERFYFKMNFPLLCLLTETG 831
Query: 753 RMERGSFLETWRSLPDSNE----VLKDLPGVVVSNVEATLDLLAASNMFFIAKRKNANQD 808
R++R S+L W+S+P+SNE + LP V +V++ L L + N+F I ++K NQ+
Sbjct: 832 RLDRESYLSMWKSIPESNERSVEIQVRLPHV---DVDSILRRLNSKNIFEIVRKKAPNQE 888
Query: 809 VFYFSAKIPPGVPFLIELTTVIGNPGVKCAIKTPNPDIASLFFEAIETLL 858
+ + S K V LIEL I +C+ KT +PDI +LF + L+
Sbjct: 889 ISFLSCKTESSVYILIELAFNISTNTCRCSSKTTSPDIMALFEHNLNLLI 938
>sp|P52303|AP1B1_RAT AP-1 complex subunit beta-1 OS=Rattus norvegicus GN=Ap1b1 PE=1 SV=1
Length = 949
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/543 (74%), Positives = 480/543 (88%), Gaps = 5/543 (0%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKSQPD+AI+AVNTFVKD +DPNP
Sbjct: 41 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNP 100
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIRALAVRTMGCIRVDKITEYLC+PL++CLKD+DPYVRKTAA+CVAKL+DINA+LVED+G
Sbjct: 101 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQG 160
Query: 121 FLESLKDLISDNNPMVVANAVAALAEI-EENSSRPIFEITSHTLSKLLTALNECTEWGQV 179
FL++LKDLISD+NPMVVAN VAAL+EI E + S + ++ + +++KLLTALNECTEW Q+
Sbjct: 161 FLDTLKDLISDSNPMVVANRVAALSEIAESHPSSNLLDLKAQSINKLLTALNECTEWAQI 220
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAM--ILQQMELITST-DVVRNL 236
FILD L Y D REA++I ERVTPRL HAN AVVLSA+ +++ ME+++ D L
Sbjct: 221 FILDCLGNYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATL 280
Query: 237 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 296
KK+APPLVTLLSAEPE QYV LRNINLIVQ+RP IL HE+KVFF KYNDPIYVK+EKL+
Sbjct: 281 LKKLAPPLVTLLSAEPEPQYVPLRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLD 340
Query: 297 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 356
IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S LL+LI+
Sbjct: 341 IMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 400
Query: 357 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 416
KVNYVVQEAI+VIKDIFR+YPN YES+IATLCE+LD+LDEPEA+A+MIWI+GEYAERID
Sbjct: 401 TKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 460
Query: 417 NADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDL 476
NADELLESFL+ F +E QVQLQLLTA VKLFLKKPTE Q+++Q VL+ AT ++DNPDL
Sbjct: 461 NADELLESFLDGFHDESTQVQLQLLTAIVKLFLKKPTET-QELVQQVLSLATQDSDNPDL 519
Query: 477 RDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPE 536
RDR YIYWRLLSTDP AAK+VVLAEKP+IS++++ ++P+LLDEL+ I TL+SVYHKPP
Sbjct: 520 RDRGYIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPN 579
Query: 537 AFV 539
AFV
Sbjct: 580 AFV 582
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 134/262 (51%), Gaps = 14/262 (5%)
Query: 602 PVPDLLGDLIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIGAELTRQDGQVFYS 661
PV L DL L + + + S V V LPA +GL+I TRQ G +
Sbjct: 697 PVSSGLSDLFDLTSGVGTL-----SGSYVAPKAVWLPAMKAKGLEISGTFTRQVGSISMD 751
Query: 662 MLFENNTQTPLDGFMIQFNKNTFGLAAGGALQVPQ-LQPGTSGRTLLPMVLFQNMSAGPP 720
+ N + F IQFN+N+FGLA LQV L P + LP+ ++ P
Sbjct: 752 LQLTNKALQVMTDFAIQFNRNSFGLAPAAPLQVHAPLSPNQTVEISLPLNTVGSVMKMEP 811
Query: 721 SSLLQVAVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNEV---LKDLP 777
+ LQVAVKNN V+YF+ LHVLF EDG+M+R FL TW+ +P+ NE ++D P
Sbjct: 812 LNNLQVAVKNNID-VFYFSTLYPLHVLFVEDGKMDRQMFLATWKDIPNENEAQFQIRDCP 870
Query: 778 GVVVSNVEATLDLLAASNMFFIAKRKNANQDVFYFSAKIPPGVPFLIELTTVIGNPGVKC 837
N EA L +SN+F +AKR QD+ Y S K+ G+ L EL GNP
Sbjct: 871 ----LNTEAASSKLQSSNIFTVAKRTVEGQDMLYQSLKLTNGIWVLAELRIQPGNPSFTL 926
Query: 838 AIKTPNPDIASLFFEAIETLLK 859
++K P+++ +A ET+LK
Sbjct: 927 SLKCRAPEVSQHDIQAYETILK 948
>sp|O43079|AP1B1_SCHPO AP-1 complex subunit beta-1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=apl2 PE=1 SV=1
Length = 683
Score = 545 bits (1405), Expect = e-154, Method: Compositional matrix adjust.
Identities = 288/643 (44%), Positives = 417/643 (64%), Gaps = 40/643 (6%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MTVGKDVSSLF DV+ + T ++ LKKLVYLYLINYAK+ PDL ILAVNTFVKDS++ NP
Sbjct: 45 MTVGKDVSSLFPDVLKNLATRDITLKKLVYLYLINYAKTHPDLCILAVNTFVKDSEEYNP 104
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+RALA+RTMGCIRV+KI YL DPL++ LKD+ PYVRK AA+CV K+YD++ E G
Sbjct: 105 TLRALAIRTMGCIRVNKIIGYLADPLRKALKDEHPYVRKAAAVCVVKMYDLDREYCASNG 164
Query: 121 FLESLKDLISDNNPMVVANAVAALAEI-EENSSRPIFEITSHTLSKLLTALNECTEWGQV 179
F+E L+ L+SD NP+VVANAV +LAEI +++ + F + +L+ AL+EC EWG++
Sbjct: 165 FIEQLQALVSDPNPVVVANAVRSLAEIHDQDPEKGYFNVVYTMTDRLMVALSECNEWGRI 224
Query: 180 FILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAMILQQMEL-ITSTDVVRNLCK 238
IL++L+R++ +D +EAE + ERV P+ QHAN VVLSA+ + + + + S+D L K
Sbjct: 225 TILNSLARFRTSDIKEAEYVCERVVPQFQHANSGVVLSAVKVIMVHIPLFSSDFTDFLYK 284
Query: 239 KMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 298
KMAPPL+TLLS + EIQYVALRNINLI+Q+RP+I + +VFFCKYNDP+Y+KMEKL+I+
Sbjct: 285 KMAPPLLTLLSTDSEIQYVALRNINLILQKRPSIFDVKTRVFFCKYNDPLYIKMEKLKII 344
Query: 299 IKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIK 358
LA D NI++ + E + Y +EV+++FV++ ++ +G A+K+ CIS+ LE+ ++
Sbjct: 345 TMLACDENINETISELRAYVSEVELEFVKQTIKCLGDVALKVPSVINDCISIFLEIYELN 404
Query: 359 VNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNA 418
++Y+VQE +V++ + R+YP + ++ L ++ L +P A++SM WI+GE++ I +
Sbjct: 405 ISYMVQEVTVVMETVLRKYPQKIDLLLPYLSRVIEELGDPRARSSMAWILGEFSHVIPTS 464
Query: 419 DELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRD 478
+LL + + +E Q+QL LLTA VKL L ++++Q VLN A ++ N DLRD
Sbjct: 465 SKLLSEMISTMADEDLQIQLALLTAVVKLSLMNGKGNDEELVQKVLNYAINQSSNQDLRD 524
Query: 479 RAYIYWRLLS-TDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEA 537
RA+ Y RLL+ + A+ +V EKP +S ++N L +LLD LL I TL+SVYHK PE+
Sbjct: 525 RAFAYQRLLTPENVRKAQKIVCCEKPSVSYNNN-LPEALLDALLCEITTLASVYHKLPES 583
Query: 538 FVTRVKTTASRTD----------------------------DEDYPNGSEQGYSDAPTHV 569
F+ + K A D D+ + SD+P
Sbjct: 584 FIGQGKFGADAIQRRAVEELNIEEANVHEAIEKGANVENLLDLDFTDPGATSASDSPI-- 641
Query: 570 ADEGASPQTSSSNAP--YAATRQPAPPPAAPVS--PPVPDLLG 608
A PQ+ S++A + A P+ A PV DLLG
Sbjct: 642 --TSAQPQSGSNSAMDLFMAFEAPSTNNAEPVKARSATDDLLG 682
>sp|O43005|AP2B_SCHPO AP-2 complex subunit beta OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=apl1 PE=3 SV=1
Length = 677
Score = 492 bits (1267), Expect = e-138, Method: Compositional matrix adjust.
Identities = 253/542 (46%), Positives = 364/542 (67%), Gaps = 4/542 (0%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
++ G D+SSLF V++ M++ NLELKKL YLYL YA +P A AV + D NP
Sbjct: 42 ISYGYDMSSLFPSVISSMESNNLELKKLCYLYLKIYASVKPTEAKRAVKLILNDIYSSNP 101
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IR+LA+RT+ + + DP+ R L D DPYVRKTAAI +AKLY + ++VE G
Sbjct: 102 MIRSLALRTLTSVNIKNFWVAAMDPIVRLLDDTDPYVRKTAAIGIAKLYSYDKKMVESSG 161
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
++ LK+++SD + +VVAN++AAL I +S+ + +KL+ +L +C+EW QV
Sbjct: 162 LIDHLKEMLSDESSVVVANSLAALMNIVNSSTGFKLTFSREISNKLVKSLTDCSEWLQVA 221
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAM--ILQQMELITSTDVVRNLCK 238
ILDAL Y EAE+ ER++P LQH N AV + A+ IL + + V+
Sbjct: 222 ILDALIFYVPQKPGEAESFAERISPWLQHGNAAVCMGAVKVILYLTNYMKDDNRVKEYFM 281
Query: 239 KMAPPLVTLLSAEPE-IQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEI 297
K PPLVTLL+ + QYV LRNI +I+++ P + A++I F+C ++DPIYVK+EKL+I
Sbjct: 282 KTQPPLVTLLARKSSATQYVILRNIQIILEQCPEMFANDIHFFYCNFDDPIYVKLEKLDI 341
Query: 298 MIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKI 357
+ K+A N+DQ+L EF EYA+E+DV+ VRK+V+ IG AIK+E CI L+EL+
Sbjct: 342 LTKIADIHNLDQILPEFVEYASEIDVELVRKSVKCIGYLAIKIEERKNDCIDSLIELMNT 401
Query: 358 KVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN 417
KV YV+QEA+IVI+DI R+YP +Y+S++ L E+LD+LDEP+AK+++IWI+G+YAE I++
Sbjct: 402 KVTYVIQEAVIVIRDILRKYPGSYKSLVPILYENLDSLDEPDAKSAVIWILGQYAEEIED 461
Query: 418 ADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLR 477
+ LL +L+ F +EP ++QL LLTA +K+FLKKPT M+ VL T E ++PDLR
Sbjct: 462 SITLLNDYLKGFFDEPLEIQLTLLTAVIKVFLKKPT-AAADMVTNVLQWCTDEVNDPDLR 520
Query: 478 DRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEA 537
DR IY R+LS +PE AK V+LA P ++ + DP ++L+ NI+TLSS+YHKPP
Sbjct: 521 DRGIIYSRMLSANPELAKKVILANMPPVNVGTGMYDPDTTEQLMLNISTLSSIYHKPPNR 580
Query: 538 FV 539
FV
Sbjct: 581 FV 582
>sp|P36000|AP1B1_YEAST AP-1 complex subunit beta-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=APL2 PE=1 SV=1
Length = 726
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/556 (40%), Positives = 350/556 (62%), Gaps = 33/556 (5%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT+GKDVSSLF DV+ + T ++E KKLVYLY++NYA++ P+L ILAVNTF+ D+QDPNP
Sbjct: 54 MTLGKDVSSLFPDVLKNIATIDVEQKKLVYLYVMNYAETHPELCILAVNTFITDAQDPNP 113
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
LIR +A+RTM IRVDKI EY+ PL+R L DD+ YVRKTA ICVAKL+ +N +L + G
Sbjct: 114 LIRCMAIRTMSMIRVDKILEYIETPLRRTLHDDNAYVRKTAVICVAKLFQLNKDLCVELG 173
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPI---FEITSHTLSKLLTALNECTEWG 177
+E L + + D+NP+V+ANA AAL EI + I SH +S+ L ALNECTEW
Sbjct: 174 VVEDLVNALDDSNPLVIANATAALIEIHNMDMDAVDLSSLIQSH-VSQFLLALNECTEWA 232
Query: 178 QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAMI-----LQQMELITSTDV 232
++ IL LS Y A D+ EA++I++RVT LQH N AVVL+ + L Q+E +++ +
Sbjct: 233 RIIILGTLSEYSAKDSLEAQDIIDRVTAHLQHVNPAVVLATIKVIVRNLPQIEYSSNSLI 292
Query: 233 VRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKM 292
+ K+++ V+L+S PE+QYVAL+NI +I+++ P +L E+++F+ K+NDP+YVK+
Sbjct: 293 M----KRLSSAFVSLMSTPPEMQYVALKNIRIILEKYPELLTKELRIFYVKFNDPLYVKL 348
Query: 293 EKLEIMIKLASDRNIDQ---VLLEFKEYATEVDVDFVRKAVRAIGRCAIKL--ERAAERC 347
EK++I+++L N+ Q +L E KEYA E + +FV +A++A+ + IK E +
Sbjct: 349 EKIDILVRLVDPSNLKQCTLLLTELKEYAMEYEPEFVSRAIQALSQLGIKYAQESFVSKV 408
Query: 348 ISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPE-------A 400
+ +LLEL++ + + + + I + D+ R P + + +C +T PE A
Sbjct: 409 LDILLELLE-RQDTIKDDCCISLCDLLRHCPGN-DKMAKQVCAVFNTWSNPEVLLQSDIA 466
Query: 401 KASMIWIIGEYAERIDNADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMI 460
K + +W++G++ + + + F+E+F +E A Q+ LL V+L M+
Sbjct: 467 KCNYVWLLGQHPNNFSDLESKINIFIENFVQEEALTQMSLLMTIVRLH----ATLTGSML 522
Query: 461 QVVLNNATVETDNPDLRDRAYIYWRLLS--TDPEAAKDVVLAEKPVISDDSNQLDPSLLD 518
Q VL AT +T D+RD A +YWR LS + D+ + P+IS+ + P +L+
Sbjct: 523 QSVLELATQQTHELDVRDMAMMYWRCLSMPNNESLVNDLCQNKLPMISNTLEKFSPEVLE 582
Query: 519 ELLANIATLSSVYHKP 534
+LL + T+SS+Y KP
Sbjct: 583 KLLMELGTISSIYFKP 598
>sp|Q9LDK9|APBLA_ARATH Beta-adaptin-like protein A OS=Arabidopsis thaliana GN=BETAA-AD
PE=1 SV=1
Length = 841
Score = 339 bits (870), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 198/553 (35%), Positives = 324/553 (58%), Gaps = 15/553 (2%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT+G DVSS+F ++V C T ++ LKK+ YLY+ NYAK PDL++L +N +D +D +P
Sbjct: 55 MTIGIDVSSVFGEMVMCSATSDIVLKKMCYLYVGNYAKGNPDLSLLTINFLQRDCKDEDP 114
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IR LA+R++ +RV + EYL PL LKD++ YVR A V KLY I+ D
Sbjct: 115 MIRGLALRSLCSLRVPNLVEYLVGPLGSGLKDNNSYVRTIAVTGVLKLYHISPSTCIDAD 174
Query: 121 FLESLKDL-ISDNNPMVVANAVAALAEI---EENSSRPIFEITSHTLSK-----LLTALN 171
F +LK L + D++ VVAN ++AL EI E + S LSK L +
Sbjct: 175 FPATLKSLMLHDSDAQVVANCLSALQEIWSLEASHSEEACREKESLLSKPVIYYFLNRIK 234
Query: 172 ECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAMILQQMELITSTD 231
E EW Q IL+ +Y +D+ + +I+ + RLQHAN AVVL+ + + ++ TD
Sbjct: 235 EFNEWAQCLILELAVKYVPSDSNDIFDIMNLLEDRLQHANGAVVLATVKVFLQLTLSMTD 294
Query: 232 VVRNLCKKMAPPLVTLLSA-EPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYV 290
V + + +++ PL+TL+S+ PE Y L +++L+V R P I A + K F+C+YN+P YV
Sbjct: 295 VHQQVYERIKSPLLTLVSSGSPEQSYAILSHLHLLVVRAPFIFAADYKHFYCQYNEPSYV 354
Query: 291 KMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISV 350
K KLE++ +A++ N +++ E EYA VD+ R+++RA+G+ A++ + +
Sbjct: 355 KKLKLEMLTAVANESNTYEIVTELCEYAANVDIAIARESIRAVGKIALQ-QYDVNAIVDR 413
Query: 351 LLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCE-SLDTLDEPEAKASMIWIIG 409
LL+ ++++ +YV E ++++KD+ R+YP I+ + S + EP+AKA++IW++G
Sbjct: 414 LLQFLEMEKDYVTAETLVLVKDLLRKYPQWSHDCISVVGGISSKNIQEPKAKAALIWMLG 473
Query: 410 EYAERIDNADELLESFLESFPEE-PAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNAT 468
EYA+ + +A +LE+ +E++ EE A+V+L LLTA +K F K+ E Q+ + L A
Sbjct: 474 EYAQDMSDAPYVLENLIENWEEEHSAEVRLHLLTAAMKCFFKRAPE-TQKALGTAL-AAG 531
Query: 469 VETDNPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIATLS 528
+ + D+ DRA Y+R+L D A+ VV K +S ++ + D + +LS
Sbjct: 532 IADFHQDVHDRALFYYRVLQYDVHVAERVVSPPKQAVSVFADTQSSEIKDRVFDEFNSLS 591
Query: 529 SVYHKPPEAFVTR 541
+Y KP F +
Sbjct: 592 VIYQKPSYMFTDK 604
>sp|Q9WV76|AP4B1_MOUSE AP-4 complex subunit beta-1 OS=Mus musculus GN=Ap4b1 PE=2 SV=2
Length = 738
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/559 (30%), Positives = 298/559 (53%), Gaps = 35/559 (6%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT G D+S +F ++V T ++ KKLVYLY+ YA +PDLA+LA+NT KD DPNP
Sbjct: 40 MTQGLDMSDVFMEMVKASATVDIVQKKLVYLYMGTYAPLKPDLALLAINTLCKDCSDPNP 99
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
++R LA+R+M +R+ + EY+ P+ L+D YVR+ A + AK+++++ + D
Sbjct: 100 MVRGLALRSMCSLRMPGVQEYIQQPVVNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGA 159
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ L L+ D +P+VV N + +L EI + + I LL +++ +WGQ
Sbjct: 160 LVNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVV--INKPIAHHLLNRMSKLDQWGQAE 217
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSA----MILQQMELITSTDVVRNL 236
+L+ L RY+ E +I+ + L+ ++ VV+ A +IL + TDV L
Sbjct: 218 VLNFLLRYQPRSEEELFDILNLLDSYLKSSSTGVVMGATKLFLILAKKFPHVQTDV---L 274
Query: 237 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 296
+ P L S E+ + AL ++ ++ P + K FFC Y++P Y+K++K+E
Sbjct: 275 VRVKGPLLAACSSESRELCFAALCHVRQVLHSLPGHFSSHYKKFFCSYSEPHYIKLQKVE 334
Query: 297 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 356
++ +L +D N+ QVL E + Y T+V DF + A+ AIG A + ++C+ +L EL+
Sbjct: 335 VLCELVNDENVQQVLEELRGYCTDVAADFAQAAIFAIGSIA---KTYTDQCVQILTELLG 391
Query: 357 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 416
++ ++ + +D+ P E++ L + + + E K ++IW++G + E+I
Sbjct: 392 LRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLLGVHGEKIP 451
Query: 417 NADELLESFLESFPEE--PAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNP 474
NA +LE F+++ E PA V+++LLTA ++L L +P E Q M+ +L+ E +
Sbjct: 452 NAPYVLEDFVDNVKSETFPA-VKMELLTALMRLVLSRPAEC-QDMLGRLLHYCIEEEKDM 509
Query: 475 DLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSL----------LDELLANI 524
+RDR Y+RLL + K ++ + K DPSL ++ ++
Sbjct: 510 AVRDRGLFYYRLLLVGIDKVKQILCSPKS---------DPSLGLLEDQPERPVNSWASDF 560
Query: 525 ATLSSVYHKPPEAFVTRVK 543
TL+ VY + A +++ +
Sbjct: 561 NTLAPVYGRAHWATISKCQ 579
>sp|Q9Y6B7|AP4B1_HUMAN AP-4 complex subunit beta-1 OS=Homo sapiens GN=AP4B1 PE=1 SV=2
Length = 739
Score = 269 bits (688), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 181/562 (32%), Positives = 305/562 (54%), Gaps = 24/562 (4%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT G D+S +F ++V T ++ KKLVYLY+ YA +PDLA+LA+NT KD DPNP
Sbjct: 40 MTQGLDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNP 99
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
++R LA+R+M +R+ + EY+ P+ L+D YVR+ A + AK+++++ + D
Sbjct: 100 MVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSEVDGA 159
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ L L+ D +P+VV N + +L EI + + I LL +++ +WGQ
Sbjct: 160 LVNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVV--INKPIAHHLLNRMSKLDQWGQAE 217
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSA----MILQQMELITSTDVVRNL 236
+L+ L RY+ E +I+ + L+ ++ VV+ A +IL +M TDV L
Sbjct: 218 VLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKMFPHVQTDV---L 274
Query: 237 CKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 296
+ P L S E+ +VAL ++ I+ P + K FFC Y++P Y+K++K+E
Sbjct: 275 VRVKGPLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVE 334
Query: 297 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 356
++ +L +D N+ QVL E + Y T+V DF + A+ AIG A ++C+ +L EL+
Sbjct: 335 VLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGGIA---RTYTDQCVQILTELLG 391
Query: 357 IKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERID 416
++ ++ + +D+ P E++ L + + + E K ++IW++G + ERI
Sbjct: 392 LRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLLGVHGERIP 451
Query: 417 NADELLESFLESFPEE--PAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNP 474
NA +LE F+E+ E PA V+++LLTA ++LFL +P E Q M+ +L E +
Sbjct: 452 NAPYVLEDFVENVKSETFPA-VKMELLTALLRLFLSRPAEC-QDMLGRLLYYCIEEEKDM 509
Query: 475 DLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQL--DPSL--LDELLANIATLSSV 530
+RDR Y+RLL + K ++ + K SD + L DP+ ++ ++ TL V
Sbjct: 510 AVRDRGLFYYRLLLVGIDEVKRILCSPK---SDPTLGLLEDPAERPVNSWASDFNTLVPV 566
Query: 531 YHKPPEAFVTRVKTTASRTDDE 552
Y K A +++ + A R D E
Sbjct: 567 YGKAHWATISKCQ-GAERCDPE 587
>sp|P27351|AP2B_YEAST AP-2 complex subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APL1 PE=1 SV=2
Length = 700
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 308/549 (56%), Gaps = 24/549 (4%)
Query: 6 DVSSLFTDVVNCMQTEN-LELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRA 64
++S LF++++ Q E+ LE+K++ + Y+ +P A A+ + D + + ++
Sbjct: 52 EMSVLFSELLKFWQIEDDLEVKRICHEYIRVIGALKPQQAREALPFIMDDFKSRDEKLQI 111
Query: 65 LAVRTMGCIRVDKITEYLCDPLQRCLKDDDP--YVRKTAAICVAKLYDINAELVEDRGFL 122
+A+RT+ + V ++++ D + + P V +TA + L +I+ E V G
Sbjct: 112 MALRTLVLVPVKELSDQAFDCIISLVNHKSPPEQVTRTAIYALLDLDEIDHERV--LGLS 169
Query: 123 ESLKDLIS--DNNPMVVANAVAALAEI-EENSSRPIFEITSHTLSKLLTALNECTEWGQV 179
L D++ ++P V+ A+ L I E+N++ F I +L L E EW +
Sbjct: 170 SILHDIVKAQSSSPEVIVAALHTLYSIHEKNANMEPFRIPLELAFDMLELLPELNEWNKA 229
Query: 180 FILDALSRYKAADAR-EAENIVERVTPRLQHANCAVVLSAMILQQMELITSTDVVR-NLC 237
+L+ L+ + ++E P LQ N VVL+++ M L+ DV++ L
Sbjct: 230 TVLEVLTTSVVPQHYLDTHEMIELALPYLQQVNTYVVLNSLKFI-MYLLNYVDVIKETLA 288
Query: 238 KKMAPPLVTLLSAEPEIQYVALRN-INLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLE 296
+K++ ++ LL PE+Q++ LRN I L++ R ++L +I FF +YNDPIY+K KLE
Sbjct: 289 EKLSNSVIALLDKPPELQFLVLRNVILLLLSRESSLLRLDISYFFIEYNDPIYIKDTKLE 348
Query: 297 IMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKL-ERAAERCISVLLELI 355
+ LA+ + ++L E ++YAT++D+ RK+VRAIG A+KL E + C++VLL+L+
Sbjct: 349 CLYLLANKETLPRILEELEQYATDIDIQMSRKSVRAIGNLAVKLDEDSVHDCVAVLLDLL 408
Query: 356 KIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERI 415
+ V+YVVQE I V ++I R+YPN +++ + L + + + EPE+K +MIWII +Y++ I
Sbjct: 409 EFGVDYVVQEIISVFRNILRKYPNNFKANVTELVKHTEVVQEPESKNAMIWIITQYSDVI 468
Query: 416 DNADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPD 475
N EL F + E +VQ +L + +K F++ PT+ +++ +L +NPD
Sbjct: 469 PNYLELFRVFSSNMFSETLEVQFSILNSAIKFFIRSPTKETEELCMDLLKGCIDHENNPD 528
Query: 476 LRDRAYIYWRLLSTDP----------EAAKDVVLAEKPVISDDSNQLDPSLLDELLANIA 525
LRD+ +YWRLLS E+ K V+ E P+I ++ +LDP++L+EL NI
Sbjct: 529 LRDKTLMYWRLLSLTKTSRISNAITFESLKSVLDGELPLIEMNT-KLDPTVLEELELNIG 587
Query: 526 TLSSVYHKP 534
T+ S+Y KP
Sbjct: 588 TIVSIYLKP 596
>sp|Q54R84|AP4B_DICDI AP-4 complex subunit beta OS=Dictyostelium discoideum GN=ap4b1 PE=3
SV=1
Length = 838
Score = 255 bits (652), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 172/584 (29%), Positives = 300/584 (51%), Gaps = 50/584 (8%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
MT+G DVS LF DV+ + ++ +KKLVYLY+++Y+KS PDL +L VNT +D D NP
Sbjct: 54 MTIGMDVSVLFPDVIMVASSNDIIIKKLVYLYIVHYSKSNPDLLLLVVNTLRRDCIDRNP 113
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IR LA+R++ + EY + R L D YVRKTA + +AKLY ++ E +
Sbjct: 114 IIRGLALRSLCSLDSKNTLEYATIEINRSLTDFSGYVRKTALLGLAKLYHLSKEAFDLDI 173
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
+ + D+I D +P V+ NAV+ L EI +P + T + L+ E EW Q
Sbjct: 174 IIPKIFDMIMDQDPQVIVNAVSTLNEI-----KPGWSFTFDLVQHLMIKFKEFNEWSQCI 228
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAMILQQMELITSTDVVRNLCKKM 240
IL+ LSRY + E+ +I+ + RL H+N A+ LS + + ++ + +++
Sbjct: 229 ILECLSRYTPSSEDESLDILNLLDDRLSHSNSALTLSTIKIFLKYTDEFEEIQEQVYERI 288
Query: 241 APPLVTLL--SAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIM 298
PL+TL+ S E + L +I+L++ R P + K F+CK++DP+Y+K K++++
Sbjct: 289 KEPLITLMESSESNETSFTILHHIHLLMSRSPRLFNRYYKHFYCKFDDPLYIKTLKVQVL 348
Query: 299 IKLASDR----NIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERC---ISVL 351
++AS++ +ID++L E EY E D ++++ AI A K + E+ SVL
Sbjct: 349 KEIASNQTFIESIDEILQELSEYVYEGDHSLCKQSINAITVIAQKHKNTQEKYPIDESVL 408
Query: 352 LELI----------------KIKVNYVVQEAIIV-IKDIFRRYPNTYESIIATLCESLDT 394
++ I +N + I++ +KD R +P ++++ + E+L
Sbjct: 409 EKIFLPYLSVSSNLGGAGDDNISINEGILSFILISLKDFLRVFPKHLKTVLPYINENLIG 468
Query: 395 LDE-------PEAKASMIWIIGEYAERIDNADELLESFL-ESFPEEPAQVQLQLLTATVK 446
+ P A S++W++GE N+ ++E F E F ++P V+ QLLT ++K
Sbjct: 469 IGSVSNYTLPPSANESVLWMLGESPNSQVNSPYIIEEFFNEKFDQQPTFVKTQLLTTSLK 528
Query: 447 LFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWR-LLSTDPEAAKDVVLAEKPVI 505
+F +P E + +++ + + +P L + + Y R +L D + A ++ + K
Sbjct: 529 VFFDRPGEMLPILKRILKKCCSDLSQDPGLHEISLFYSRIILLLDIDKAASIINSSKQTT 588
Query: 506 S------DDSNQLDPSLLDELLANIATLSSVYHKPPEAFVTRVK 543
S D+ N+ + DE TLS ++ K F+ K
Sbjct: 589 SINTFLEDEINEYRDKIFDEF----NTLSVLFGKHSTKFIKNKK 628
>sp|Q9JME5|AP3B2_MOUSE AP-3 complex subunit beta-2 OS=Mus musculus GN=Ap3b2 PE=1 SV=2
Length = 1082
Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 173/555 (31%), Positives = 278/555 (50%), Gaps = 69/555 (12%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 68 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIR 127
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++++ + +E
Sbjct: 128 ASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSD--QKDQLIE 185
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L++D +V + V A E+ ++ KL L + EWGQV I+
Sbjct: 186 VIEKLLADKTTLVAGSVVMAFEEVCPER----IDLIHKNYRKLCNLLIDVEEWGQVVIIS 241
Query: 184 ALSRY-------------------------------KAADAREAEN-------------- 198
L+RY K + EA
Sbjct: 242 MLTRYARTQFLSPTQNESLLEENPEKAFYGSEEDEAKGPGSEEAATAALPARKPYVMDPD 301
Query: 199 ---IVERVTPRLQHANCAVVLSAMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQ 255
++ P LQ + AVV++ L L +V +A LV LL + E+Q
Sbjct: 302 HRLLLRNTKPLLQSRSAAVVMAVAQLY-FHLAPKAEV-----GVIAKALVRLLRSHSEVQ 355
Query: 256 YVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFK 315
YV L+N+ + +R + +K F+ + DP +K+ KLE++ LA++ NI VL EF+
Sbjct: 356 YVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLREFQ 415
Query: 316 EYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFR 375
Y +D DFV ++AIGRCA + R + C++ L++L+ + VV E+++VIK + +
Sbjct: 416 TYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQ 475
Query: 376 RYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEEPA 434
P + II L + D + P A+AS++W+IGEY E + A ++L +SF E
Sbjct: 476 MQPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTAEED 535
Query: 435 QVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA- 493
V+LQ++ KL+L ++ + + Q VL+ A + N D+RDRA +L+ +
Sbjct: 536 IVKLQVINLAAKLYLTN-SKQTKLLTQYVLSLAKYD-QNYDIRDRARFTRQLIVPSEQGG 593
Query: 494 -----AKDVVLAEKP 503
AK + LA KP
Sbjct: 594 ALSRHAKKLFLAPKP 608
Score = 33.5 bits (75), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 606 LLGDLIGLD-NSAAIVPADQAAASPVPALPV--VLPASTGQGLQIGAELTRQD-----GQ 657
L DL GL +++VP+ SPV ++ +L G+GL + +RQ
Sbjct: 832 LAADLEGLTLTDSSLVPS---LLSPVSSIGRQELLHRVAGEGLSVDYAFSRQPFSGDPHM 888
Query: 658 VFYSMLFENNTQTPLDGFMIQFNKNTFGLAAGGALQVPQLQPGTSGRTLL 707
V + F NN++TP+ G + K G++ ++ L PG S T++
Sbjct: 889 VSLHIYFSNNSETPIKGLHVGTPKLPAGISIQEFPEIESLAPGESTTTVM 938
>sp|Q13367|AP3B2_HUMAN AP-3 complex subunit beta-2 OS=Homo sapiens GN=AP3B2 PE=1 SV=2
Length = 1082
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 173/555 (31%), Positives = 278/555 (50%), Gaps = 69/555 (12%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + +N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 68 GKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIR 127
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRKTAA + KLY ++++ + +E
Sbjct: 128 ASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSD--QKDQLIE 185
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L++D +V + V A E+ ++ KL L + EWGQV I+
Sbjct: 186 VIEKLLADKTTLVAGSVVMAFEEVCPER----IDLIHKNYRKLCNLLIDVEEWGQVVIIS 241
Query: 184 ALSRY-------------------------------KAADAREAEN-------------- 198
L+RY K A + E
Sbjct: 242 MLTRYARTQFLSPTQNESLLEENAEKAFYGSEEDEAKGAGSEETAAAAAPSRKPYVMDPD 301
Query: 199 ---IVERVTPRLQHANCAVVLSAMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQ 255
++ P LQ + AVV++ L L +V +A LV LL + E+Q
Sbjct: 302 HRLLLRNTKPLLQSRSAAVVMAVAQLY-FHLAPKAEV-----GVIAKALVRLLRSHSEVQ 355
Query: 256 YVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFK 315
YV L+N+ + +R + +K F+ + DP +K+ KLE++ LA++ NI VL EF+
Sbjct: 356 YVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLREFQ 415
Query: 316 EYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFR 375
Y +D DFV ++AIGRCA + R + C++ L++L+ + VV E+++VIK + +
Sbjct: 416 TYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQ 475
Query: 376 RYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEEPA 434
P + II L + D + P A+AS++W+IGEY E + A ++L +SF E
Sbjct: 476 MQPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHVPRIAPDVLRKMAKSFTAEED 535
Query: 435 QVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA- 493
V+LQ++ KL+L ++ + + Q VL+ A + N D+RDRA +L+ +
Sbjct: 536 IVKLQVINLAAKLYLTN-SKQTKLLTQYVLSLAKYD-QNYDIRDRARFTRQLIVPSEQGG 593
Query: 494 -----AKDVVLAEKP 503
AK + LA KP
Sbjct: 594 ALSRHAKKLFLAPKP 608
>sp|Q7YRF1|AP3B1_CANFA AP-3 complex subunit beta-1 OS=Canis familiaris GN=AP3B1 PE=2 SV=1
Length = 1091
Score = 249 bits (635), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 170/545 (31%), Positives = 277/545 (50%), Gaps = 59/545 (10%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E + +E
Sbjct: 133 ASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPE--QKEMLIE 190
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D + +V + V A E+ + ++ KL L + EWGQV I+
Sbjct: 191 VIEKLLKDKSTLVAGSVVMAFEEVCPDR----IDLIHKNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRYK----------------------AADAREAEN----------------IVERVTP 205
L+RY +D + E ++ P
Sbjct: 247 MLTRYARTQFVSPWKEDDGLEDNEKNFYESDDEQKEKTDQKKKPYAMDPDHRLLIRNTKP 306
Query: 206 RLQHANCAVVLSAMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLI 265
LQ N AVV++ + Q I+ V + K LV LL + E+QY+ L+NI +
Sbjct: 307 LLQSRNAAVVMA--VAQLYWHISPKSEVGIISKS----LVRLLRSNREVQYIVLQNIATM 360
Query: 266 VQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDF 325
+R +L +K F+ + DP +K+ KLEI+ LA++ NI +L EF+ Y D F
Sbjct: 361 SIQRKGMLEPYLKSFYVRSTDPTMIKILKLEILTNLANEANISTLLREFQTYVKSQDKQF 420
Query: 326 VRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESII 385
++ IGRCA + + C+S L+ L+ + VV E+++VIK + + P + II
Sbjct: 421 AAATIQTIGRCATSISEVTDTCLSGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQHGEII 480
Query: 386 ATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEEPAQVQLQLLTAT 444
+ + LD++ P A+AS++W+IGE ER+ A ++L +SF E V+LQ+L
Sbjct: 481 KHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTNEDDLVKLQILNLG 540
Query: 445 VKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA------AKDVV 498
KL+L ++ + + Q +LN + N D+RDR +L+ + ++ AK +
Sbjct: 541 AKLYLTN-SKQTKLLTQYILNLGKYD-QNYDIRDRTRFIRQLIVPNEKSGALSKYAKKIF 598
Query: 499 LAEKP 503
LA+KP
Sbjct: 599 LAQKP 603
>sp|O00203|AP3B1_HUMAN AP-3 complex subunit beta-1 OS=Homo sapiens GN=AP3B1 PE=1 SV=3
Length = 1094
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 166/546 (30%), Positives = 274/546 (50%), Gaps = 61/546 (11%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E + +E
Sbjct: 133 ASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPE--QKEMLIE 190
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D + +V + V A E+ + ++ KL L + EWGQV I+
Sbjct: 191 VIEKLLKDKSTLVAGSVVMAFEEVCPDR----IDLIHKNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRY---------KAADAREAEN-----------------------------IVERVTP 205
L+RY K D E ++ P
Sbjct: 247 MLTRYARTQFVSPWKEGDELEDNGKNFYESDDDQKEKTDKKKKPYTMDPDHRLLIRNTKP 306
Query: 206 RLQHANCAVVLS-AMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINL 264
LQ N AVV++ A + + + ++ + LV LL + E+QY+ L+NI
Sbjct: 307 LLQSRNAAVVMAVAQLYWHISPKSEAGII-------SKSLVRLLRSNREVQYIVLQNIAT 359
Query: 265 IVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVD 324
+ +R + +K F+ + DP +K KLEI+ LA++ NI +L EF+ Y D
Sbjct: 360 MSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANISTLLREFQTYVKSQDKQ 419
Query: 325 FVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESI 384
F ++ IGRCA + + C++ L+ L+ + VV E+++VIK + + P + I
Sbjct: 420 FAAATIQTIGRCATNILEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQHGEI 479
Query: 385 IATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEEPAQVQLQLLTA 443
I + + LD++ P A+AS++W+IGE ER+ A ++L +SF E V+LQ+L
Sbjct: 480 IKHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTSEDDLVKLQILNL 539
Query: 444 TVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA------AKDV 497
KL+L ++ + + Q +LN + N D+RDR +L+ + ++ AK +
Sbjct: 540 GAKLYLTN-SKQTKLLTQYILNLGKYD-QNYDIRDRTRFIRQLIVPNVKSGALSKYAKKI 597
Query: 498 VLAEKP 503
LA+KP
Sbjct: 598 FLAQKP 603
>sp|Q32PG1|AP3B1_BOVIN AP-3 complex subunit beta-1 OS=Bos taurus GN=AP3B1 PE=2 SV=1
Length = 1084
Score = 243 bits (620), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 165/546 (30%), Positives = 276/546 (50%), Gaps = 61/546 (11%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E + +E
Sbjct: 133 ASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPE--QKEMLIE 190
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D + +V + V A E+ + ++ KL L + EWGQV I+
Sbjct: 191 IIEKLLKDKSTLVAGSVVMAFEEVCPDR----IDLIHKNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRY------------------------------KAADAR--------EAENIVERVTP 205
L+RY + AD R + ++ P
Sbjct: 247 MLTRYARTQFVSPWRQGDVLEDNEKDFYDSDEEQKEKADKRKRPYAMDPDHRLLIRNTKP 306
Query: 206 RLQHANCAVVLS-AMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINL 264
LQ N AVV++ A + + + ++ + LV LL + E+QY+ L+NI
Sbjct: 307 LLQSRNAAVVMAVAQLYWHIAPKSEAGII-------SKSLVRLLRSSREVQYIVLQNIAT 359
Query: 265 IVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVD 324
+ +R + +K F+ + D +K+ KLEI+ LA++ NI +L EF+ Y D
Sbjct: 360 MSIQRKGMFEPYLKSFYVRSTDATMIKILKLEILTNLANEANISTLLREFQTYVKSQDKQ 419
Query: 325 FVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESI 384
F ++ IGRCA + ++ C++ L+ L+ + VV E+++VIK + + P + I
Sbjct: 420 FAAATIQTIGRCATSITEVSDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPMQHGEI 479
Query: 385 IATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEEPAQVQLQLLTA 443
I + + LD++ P A+AS++W+IGE ER+ A ++L +SF E V+LQ+L
Sbjct: 480 IKHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKTAKSFTSEDDLVKLQILNL 539
Query: 444 TVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA------AKDV 497
KL+L + + + Q +LN + N D+RDR +L+ + ++ AK +
Sbjct: 540 GAKLYLTNSKQ-TKLLTQYILNLGKYD-QNYDIRDRTRFIRQLIVPNEKSGALSKYAKKI 597
Query: 498 VLAEKP 503
LA+KP
Sbjct: 598 FLAQKP 603
>sp|Q9Z1T1|AP3B1_MOUSE AP-3 complex subunit beta-1 OS=Mus musculus GN=Ap3b1 PE=1 SV=2
Length = 1105
Score = 243 bits (620), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 166/547 (30%), Positives = 272/547 (49%), Gaps = 62/547 (11%)
Query: 4 GKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIR 63
GK+ S LF VV + ++N+E+KKLVY+YL+ YA+ Q DLA+L+++TF + +DPN LIR
Sbjct: 73 GKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIR 132
Query: 64 ALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLE 123
A A+R + IRV I + ++ D PYVRK AA + KLY ++ E + +E
Sbjct: 133 ASALRVLSSIRVPIIVPVMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPE--QKEMLIE 190
Query: 124 SLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILD 183
++ L+ D + +V + V A E+ + ++ KL L + EWGQV I+
Sbjct: 191 VIEKLLKDKSTLVAGSVVMAFEEVCPDR----IDLIHRNYRKLCNLLVDVEEWGQVVIIH 246
Query: 184 ALSRYKAA--------DAREAEN-------------------------------IVERVT 204
L+RY D +N ++
Sbjct: 247 MLTRYARTQFVSPWREDGGLEDNEKNFYESEEEEEEKEKSSRKKSYAMDPDHRLLIRNTK 306
Query: 205 PRLQHANCAVVLS-AMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNIN 263
P LQ N AVV++ A + + + V+ + LV LL + E+QY+ L+NI
Sbjct: 307 PLLQSRNAAVVMAVAQLYWHISPKSEAGVI-------SKSLVRLLRSNREVQYIVLQNIA 359
Query: 264 LIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDV 323
+ R + +K F+ + DP +K KLEI+ LA++ NI +L EF+ Y D
Sbjct: 360 TMSIERKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANISTLLREFQTYVRSQDK 419
Query: 324 DFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYES 383
F ++ IGRCA + + C++ L+ L+ + VV E+++VIK + + P +
Sbjct: 420 QFAAATIQTIGRCATSISEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQHGE 479
Query: 384 IIATLCESLDTLDEPEAKASMIWIIGEYAERIDN-ADELLESFLESFPEEPAQVQLQLLT 442
II + + LD++ P A+AS++W+IGE ER+ A ++L +SF E V+LQ+L
Sbjct: 480 IIRHMAKLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTSEDDLVKLQILN 539
Query: 443 ATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEA------AKD 496
KL+L ++ + + Q +LN + N D+RDR +L+ + ++ AK
Sbjct: 540 LAAKLYLTN-SKQTKLLTQYILNLGKYD-QNYDIRDRTRFIRQLIVPNEKSGALSKYAKK 597
Query: 497 VVLAEKP 503
+ LA KP
Sbjct: 598 IFLAPKP 604
>sp|O13939|AP3B_SCHPO AP-3 complex subunit beta OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=apl6 PE=1 SV=1
Length = 745
Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 155/525 (29%), Positives = 258/525 (49%), Gaps = 38/525 (7%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
M G+++S F DVV + +EN E+++LV++YL+ YA+ PDLA+L+VNT K D NP
Sbjct: 61 MMHGENMSLYFPDVVKLVASENPEIRRLVHIYLLQYAEFNPDLALLSVNTVQKTLYDKNP 120
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
L R+ A+R M IRV I + +Q+C+ D VR++AA+ + K Y ++
Sbjct: 121 LTRSTAIRVMSSIRVPAINGIVLLAIQQCITDTADRVRQSAALAITKCYSLDPSY--KSQ 178
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
E +K L+SDN+P+VV AAL E + EI ++ T + +W +V
Sbjct: 179 LEEHIKTLLSDNSPIVVP---AALFTFEVVCPEKL-EIIHPYYHRICTLFPQMNDWDKVV 234
Query: 181 ILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAMILQQMELITSTDVV------- 233
L L RY AR + E TP H++ +L ++ L+ ST +
Sbjct: 235 ALKTLVRY----ARLT--LPEPSTPS-THSDLKELLESIKSCFFSLLPSTIIAGARAFYY 287
Query: 234 ---RNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYV 290
N + PL+ LL +P ++ LR I+ IV + P + + IK FF +D
Sbjct: 288 LAPSNQMHLIVEPLLQLLLEKPIVRTTTLRYISQIVYKTPELFKNHIKSFFLIASDSDDT 347
Query: 291 KMEKLEIMIKLASDRNIDQVLLEFKEYA-TEVDVDFVRKAVRAIGRCAIKLERAAERCIS 349
+ K+ I+ +L +N Q+L E Y + + AV+A+G A A C++
Sbjct: 348 CLLKINILSRLLDAQNSSQILPELLYYINSHPNPSVASTAVKALGDFASANISMAPSCLN 407
Query: 350 VLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIG 409
LL L+K + +V EA ++ + P E + L + +TL+ P AK+ +W+I
Sbjct: 408 TLLLLLKSHNSLIVTEAASSLRLLIHNDPK--EIYLQYLAATYETLEVPRAKSVTLWLIS 465
Query: 410 EYAERIDN-ADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQ-------MIQ 461
E+ I ++L +++F +E +V+ Q+L +V+L++ +E Q ++
Sbjct: 466 EHILIIPRLVPDVLRIAVKTFADETLEVKYQILELSVRLYVLSHSEEKQNDLESRDDVVS 525
Query: 462 VVLNN--ATVETD-NPDLRDRAYIYWRLLST-DPEAAKDVVLAEK 502
++ N + + D + DLRDRA Y L ST E + +VL K
Sbjct: 526 LLFNYVLSLIHFDMSYDLRDRARFYKELASTPSSEFTRRIVLESK 570
>sp|Q556J8|AP3B_DICDI AP-3 complex subunit beta OS=Dictyostelium discoideum GN=ap3b-1
PE=3 SV=1
Length = 1108
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 167/355 (47%), Gaps = 68/355 (19%)
Query: 238 KKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEI 297
+K+ LV +L + PE+QY+ L NI+ +V RP++ + FF +DP Y KLEI
Sbjct: 330 QKVGKSLVRILRSGPEVQYITLTNISTMVTLRPSMFEPHLSEFFIHSSDPEYSIKLKLEI 389
Query: 298 MIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKI 357
+ +LA+ NI ++L EFKEY D FV ++AIG CA + E CI L+ L+
Sbjct: 390 LTRLATPENIGKILKEFKEYVKNEDKKFVAATIQAIGSCASTVPDVTESCIYGLMSLLSN 449
Query: 358 KVNYVVQEAIIVIKDIFR-----------------------------RYPNT-----YES 383
+ VV E++IV+K + + ++ ++ Y++
Sbjct: 450 QSTVVVAESVIVLKRLLQLNATNEKLEKLEKEKEKEKDVKENQSTISKHSSSNNSIKYDN 509
Query: 384 IIATLCESLDTLDEPEAKASMIWIIGEYAERID-NADELLESFLESFPEEPAQVQLQLLT 442
II L + LDTL P A+AS++W+IGEY R+ A ++ ++SF +E V+L+ L
Sbjct: 510 IILHLSKLLDTLQVPSARASIVWVIGEYCYRVPLVAPDVFRKLVKSFSDEHESVKLETLN 569
Query: 443 ATVKLFLK---------------------KPTEGPQQMIQVVLNNATVETDNPDLRDRA- 480
KL+++ + E M Q VLN A + N D+RD +
Sbjct: 570 LGSKLYVQFTDNNSTTTTDNSIPNEFKNERTKEKITLMFQYVLNLAKFDQ-NYDIRDNSR 628
Query: 481 ---YIYWRLLSTDP--EAAKDVVLAEKPV-----ISDDSNQLDPSLLDELLANIA 525
+ Y+ +T K +V+ +KP+ IS+D + L ++ + A
Sbjct: 629 MLKHFYFNTENTQSINSNIKQIVINQKPIPTETSISEDRQRFTLGSLSHIVNHTA 683
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 115/194 (59%), Gaps = 6/194 (3%)
Query: 1 MTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNP 60
++ G+DVS F VV + +NLE+KKLVY+YL++YA+SQ D A+L++NT K D +
Sbjct: 49 LSKGRDVSEAFPQVVKNVIVKNLEIKKLVYMYLVHYAESQNDSALLSINTIQKSLNDQSQ 108
Query: 61 LIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRG 120
+IRA A+R M IRV I E + +++ +KD P+VRK AA +AK++ ++ + E
Sbjct: 109 VIRASALRVMSSIRVIDIIEVIILAIEKSVKDTSPFVRKAAAFAIAKVHKLDCDKQE--P 166
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
++ L+ L++D + MV+ A+ A E+ F++ K+ L + EW QV
Sbjct: 167 LIDLLEILLNDTSTMVLGAAIVAFNELCPQR----FDLLHQHYRKICQLLADFDEWSQVI 222
Query: 181 ILDALSRYKAADAR 194
+LD L++Y + R
Sbjct: 223 VLDILTKYARSQFR 236
>sp|Q759E2|AP3B_ASHGO AP-3 complex subunit beta OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=APL6 PE=3 SV=2
Length = 781
Score = 116 bits (290), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 127/528 (24%), Positives = 236/528 (44%), Gaps = 71/528 (13%)
Query: 11 FTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTM 70
F D+V + +++++++++V +YL+ YA++ P+LA+L++N+ + D NP +RALA++T+
Sbjct: 83 FADIVKNIGSDDVKVRRMVSVYLLRYAETNPNLALLSINSIQRSLSDSNPDVRALALKTL 142
Query: 71 GCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLIS 130
I + + + L++ + D VR A+ + KL+ ++D + LK L++
Sbjct: 143 SDINIASLYPIILHSLKKTVIDSSEVVRCQVAMTLLKLFKEQGISIKD-DVMPMLKSLLA 201
Query: 131 DNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRY-- 188
D+ P VV+ AAL ++ ++ + + H + + LN+ TE Q ++D Y
Sbjct: 202 DSEPSVVS---AALLLFQKAFAQELQLLHGH-YRRYCSILNQLTENAQAIMIDIFIAYAK 257
Query: 189 ----------KAADAREAE---------------------NIVERVTPRLQHANCAVVLS 217
++DA + N+ +L H+ A+V+
Sbjct: 258 EYLPRPMVRDTSSDAEAIQLPDSFNQIPFPVYDVEYDHDLNLFLSSLKKLLHSPNAMVIV 317
Query: 218 AMI-----LQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTI 272
A+ L + + +V +L + + EI+ + L++I + P++
Sbjct: 318 AVSKAFYQLSSPKTFKDSGIVDSLLRLTVSSYIC-----SEIKELVLQSILVYCCSDPSL 372
Query: 273 LAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYA-TEVDVDFVRKAVR 331
K FF +D + + KL+I+ L SD N ++ E K A TE + +
Sbjct: 373 FRSHYKRFFLMPSDTENISIFKLKILSILVSDSNCKHIVNELKFVAGTEQSASILVEVSN 432
Query: 332 AIGRCAIKLERAAERCISVLLELIKIKV---NYVVQEAIIVIKDIFRRYPNTYESIIATL 388
+ CA + + + IS LL+ I V I V++ + ++ P + + + L
Sbjct: 433 TLSVCAQISSKWSSQIISWLLDRISSNTPIDKEVTASQINVLRSLIQKDPIKHIATVVKL 492
Query: 389 CESLDTLD-EPEAKASMIWIIGEYAE---RIDNADELLESFLESFPEEPAQVQLQLLTAT 444
+ L D P AKA +IW++GEY + RI ++L L F +E A V+LQ+L
Sbjct: 493 SKMLSNHDLLPSAKAPIIWLLGEYVQVEPRI--CPDVLRRLLPQFSKEHAHVRLQILNLA 550
Query: 445 VKLFLKK------------PTEGPQQMIQVVLNNATVETDNPDLRDRA 480
KL T QM + L A + D D+RDRA
Sbjct: 551 AKLLSHDVDSYSGDMEYDIGTSRIGQMFEAALQLAKFD-DEYDVRDRA 597
>sp|Q9M2T1|AP3BA_ARATH AP3-complex subunit beta-A OS=Arabidopsis thaliana GN=AP3BA PE=2
SV=2
Length = 987
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 159/327 (48%), Gaps = 28/327 (8%)
Query: 199 IVERVTPRLQHANCAVVLSAMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQYVA 258
+++ +P L N AVVL+A +Q + + DV KK+ PL+ LL + +YV
Sbjct: 211 LLQCTSPLLWSNNSAVVLAAAGVQWI-MAPLEDV-----KKIVKPLLFLLRSSSASKYVV 264
Query: 259 LRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYA 318
L NI + + P++ A + FF +D VK KLE++ +A+ +I +L EF++Y
Sbjct: 265 LCNILVFAKAVPSLFAPHFENFFICSSDAYQVKAYKLEMLSLIATTSSIASILREFEDYI 324
Query: 319 TEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKV-----------NYVVQEAI 367
+ D F V AIG CA +L C+ LL L++ + V+ +A+
Sbjct: 325 KDPDRRFAADTVAAIGLCAKRLMTIPTTCLDGLLALVRQESFAGDFESADGEAGVLVQAV 384
Query: 368 IVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLE 427
+ I+ + R P +E ++ L SLD++ A+A++IW++G Y +L + +
Sbjct: 385 MSIQTMIERDPLRHEKVLIQLFRSLDSIKVAAARATIIWMVGVYCSLGHIIPRMLTTITK 444
Query: 428 ----SFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQ--VVLNNATVETD-NPDLRDRA 480
SF E ++ +LQ+L K+ + G M++ VV E D + D+RDR
Sbjct: 445 YLAWSFKSEASETKLQILNTIAKVLISAEA-GDFHMLKRIVVYVFELGEYDLSYDIRDRT 503
Query: 481 YIYWRLLS---TDPEAAKDVVLAEKPV 504
+LLS E A+D V +++ +
Sbjct: 504 RFLKKLLSCKLASHEPAEDSVASQENI 530
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 70 MGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-L 128
M IR+ I + +C +D YVR+ AA + KL+D+ E E +E L L
Sbjct: 1 MAGIRLHVIAPLALAAVSKCARDPAVYVRRCAANALPKLHDLRLE--EHASAIEELVGIL 58
Query: 129 ISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRY 188
++D++P VV A AA I N+ F++ KL L + EWGQ+ ++ L RY
Sbjct: 59 LNDHSPGVVGAAAAAFTSICPNN----FKLIGKNYKKLCQILPDVEEWGQILLIGTLLRY 114
Query: 189 KAA 191
A
Sbjct: 115 VVA 117
>sp|P46682|AP3B_YEAST AP-3 complex subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APL6 PE=1 SV=2
Length = 809
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 126/564 (22%), Positives = 249/564 (44%), Gaps = 93/564 (16%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
DV F DVV + T + ++K+L++LYL+ +A++ P+L +L++N+ K D N +R
Sbjct: 78 DVQLYFADVVKNITTNDTKVKRLIHLYLLRFAENDPNLTLLSINSLQKSLSDSNSELRCF 137
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLY-----DINAELVEDRG 120
A+ + +++ + + +++ + D VR A+ + KLY D + EL
Sbjct: 138 ALSALSDMKMSSLAPIILHTVKKLVTDPSAMVRGEVALAIIKLYRAGKNDYHEEL----- 192
Query: 121 FLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVF 180
L+ LK+L++D +P V++ AV A E + E+ + + + W Q +
Sbjct: 193 -LDILKELMADTDPKVISCAVLAYKECYADH----LELLHGHFRRYCRIIKQLDSWSQSY 247
Query: 181 ILDALSRY------KAADAREAENIVERVTP------RLQHANCAVVLS---AMILQQME 225
+++ L +Y K ++ R P +++ + VV + LQ +
Sbjct: 248 LIELLIKYCKQYLPKPTVVDKSSEGSPRSCPLPDKYNEIEYPSYEVVNDPDLDLFLQSLN 307
Query: 226 -LITSTD--VVRNLCK---KMAPPL--------------VTLLSAEPEIQYVALRNINLI 265
LI S++ V+ + C ++A PL VT+ + + + L+ I+ +
Sbjct: 308 CLIYSSNPTVILSCCNALYQLASPLQMKNTKFIEALVRTVTMTENQGNKE-MLLQAIHFL 366
Query: 266 VQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDV-- 323
T+ K F+ DPI + K++I+ L ++ N+ ++ E K Y
Sbjct: 367 SILDQTLFLPYTKKFYVFPKDPIVASIWKIQILSTLINESNVKEIFKELKYYVASAHFPE 426
Query: 324 DFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-----VIKDIFRRYP 378
+ V AV+++ RC +L + E V+ LI ++ + +++ VI+ + ++ P
Sbjct: 427 NVVIMAVKSLSRCG-QLSTSWES--HVMKWLIDHMESHNLSASVLDAYVNVIRMLVQKNP 483
Query: 379 NTYESIIATLCE--SLDTLDEPEAKASMIWIIGEYAE-RIDNADELLESFLESFPEEPAQ 435
+ II L + ++ T A+A ++W+ GE A ++L +++F E +
Sbjct: 484 TKHLRIIFKLADLLTVQTSLADNARAGIVWLFGEIASIEFKICPDVLRRLIQNFSNEGPE 543
Query: 436 VQLQLLTATVKL-------FLKKPTEGPQ-----------------QMIQVVLNNATVET 471
+ Q+L + KL F + G + QM VL A +
Sbjct: 544 TRCQILVLSAKLLSYDIDNFKQAQVTGSEENNQNPPYYDFSGSRISQMYNAVLYLAKYD- 602
Query: 472 DNPDLRDRAYIYWRLLSTDPEAAK 495
D D+RDRA R++S+ ++ K
Sbjct: 603 DEFDIRDRA----RMISSLFDSGK 622
>sp|Q29N38|AP2A_DROPS AP-2 complex subunit alpha OS=Drosophila pseudoobscura
pseudoobscura GN=alpha-Adaptin PE=3 SV=1
Length = 939
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 181/846 (21%), Positives = 339/846 (40%), Gaps = 117/846 (13%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ + DL L + + D Q NP+
Sbjct: 67 LGHDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIRLIIQSIKNDLQSRNPVH 126
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA++ + I + E + + + L D V+++AA+C+ +L+ + +++
Sbjct: 127 VNLALQCIANIGSRDMAESFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRSSPDIIPGGE 186
Query: 121 FLESLKDLISDNNPMVVANAVA---ALAEIEENSSRPIFEITSHTLSKLLTA----LNEC 173
+ + L++D + VV A + AL + + + + LS+++TA L +
Sbjct: 187 WTSRIIHLLNDQHMGVVTAATSLIDALVKCNPDEYKGCVNLAVSRLSRIVTASYTDLQDY 246
Query: 174 TE------WGQVFILDALSRY---------KAADAREAENIVERV-----TPRLQHANCA 213
T W V +L L Y +A E I+ + + ++QH+N
Sbjct: 247 TYYFVPAPWLSVKLLRLLQNYNPVTEEAGVRARLNETLETILNKAQEPPKSKKVQHSNAK 306
Query: 214 VVLSAMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALRNINLIVQ---RR 269
+A++ + + LI +D NL + L LS E ++Y+AL ++ +
Sbjct: 307 ---NAVLFEAINLIIHSDSEPNLLVRACNQLGQFLSNRETNLRYLALESMCHLATSEFSH 363
Query: 270 PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRK 328
+ H E+ + K + V+ ++++ + N ++++ E Y D +
Sbjct: 364 EEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLETADYSIREE 423
Query: 329 AVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIAT 387
V + A K + V+L LI+I +YV +E VI+ + R E +
Sbjct: 424 MVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINR-----EEVQGY 478
Query: 388 LCES-LDTLDEPEAKASMI----WIIGEYAERI--DNADELLESF--LESFPEEPAQVQL 438
++ + L P +M+ +I+GE+ I D+ L F L S + +
Sbjct: 479 AAKTVFEALQAPACHENMVKVGGYILGEFGNLIAGDSRSAPLVQFKLLHSKYHLCSPMTR 538
Query: 439 QLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRL---LSTDPEAAK 495
LL +T F+ E + V ++ + + + +L+ RA Y +L STD A
Sbjct: 539 ALLLSTYIKFINLFPEIRTNIQDVFRQHSNLRSADAELQQRASEYLQLSIVASTDVLA-- 596
Query: 496 DVVLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAFVTRVKTTASRTDDEDYP 555
VL E P + + + L+ + K P RV R P
Sbjct: 597 -TVLEEMPSFPERESSI--------------LAVLKKKKP----GRVPENEIRESKSPAP 637
Query: 556 NGSEQGYSDAPTHVADEGASPQTSSSNAP-YAATRQPAPPPAAPVSPPVPDLLGDLIGLD 614
HV + + S++N + PA + + + D+LGD+ G +
Sbjct: 638 TSGPGSVLQNNVHVNNSHSKLNNSNANTDLLGLSTPPANNVGSNSNSTLIDVLGDIYGSN 697
Query: 615 NSAAIVPADQAAASPVPALPVVLPASTG-----QGLQIG--AELTRQDGQVFYSMLFENN 667
N+ +S V L + G + LQIG +E + G++ + + N
Sbjct: 698 NN----------SSAVYNTKKFLFKNNGVLFENEMLQIGVKSEFRQNLGRL--GLFYGNK 745
Query: 668 TQTPLDGF--MIQFN-KNTFGLAAGGALQVPQLQPGTSGRTLLPMVLFQNMSAGPPSSLL 724
TQ PL F ++Q++ + T L P L+ G + LL ++ + P +
Sbjct: 746 TQVPLSNFNPVLQWSAEETLKLNVQMKAVEPTLEAGAQIQQLLTAECIEDYADAPT---I 802
Query: 725 QVAVKNN--QQPVWYFNDKISLHV-LFTEDGRMERGSFLETWRSLPD----SNEVLK--- 774
+++ + N QQ F+ K+ L V F E M SF W++L S +V K
Sbjct: 803 EISFRYNGTQQK---FSIKLPLSVNKFFEPTEMNAESFFARWKNLSGEQQRSQKVFKAAQ 859
Query: 775 --DLPG 778
DLPG
Sbjct: 860 PLDLPG 865
>sp|P41810|COPB_YEAST Coatomer subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC26 PE=1 SV=2
Length = 973
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 194/418 (46%), Gaps = 40/418 (9%)
Query: 18 MQTENLELKKLVYLY------LINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMG 71
M ++N ELKKL+Y Y L K + ++ IL N D Q PN IR +R +
Sbjct: 69 MPSKNKELKKLLYFYWEIVPKLAEDGKLRHEM-ILVCNAIQHDLQHPNEYIRGNTLRFLT 127
Query: 72 CIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVED-RGFLESLKDLIS 130
+R ++ E + + CL+ YVRK A + V ++ ++ L+ D + + S +++
Sbjct: 128 KLREAELLEQMVPSVLACLEYRHAYVRKYAILAVFSIFKVSEHLLPDAKEIINSF--IVA 185
Query: 131 DNNPMVVANAVAALAEIEENSSRPIFE---ITSHTLSKLLTALNECTEWGQVFILDALSR 187
+ +P+ NA LAE++ ++ E L LL A+ + Q FI +R
Sbjct: 186 ETDPICKRNAFIGLAELDRENALHYLENNIADIENLDPLLQAV-----FVQ-FIRQDANR 239
Query: 188 YKAADAREAENIVERVTPRLQHA---NCAVVLSAMILQQMELITSTDVVRNLCKKMAPPL 244
A A+ E ++E ++ A+ L+ + L+ + + + +L K++
Sbjct: 240 TPALKAQYIELLMELLSTTTSDEVIFETALALTVLSANPNVLVPAVNKLIDLAVKVSDNN 299
Query: 245 VTLLSAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASD 304
+ L+ + IQ + N+ + + IL +V + D V+ + L+I + LA+
Sbjct: 300 IKLIVLD-RIQDINANNVGALEELTLDIL----RVLNAEDLD---VRSKALDISMDLATS 351
Query: 305 RNIDQVL-LEFKEYATEVD-------VDFVRKAVRAIGRCAIKLERAAERCISVLLELIK 356
RN + V+ L KE T V+ + + + ++ I A+ A +S+LL+ I
Sbjct: 352 RNAEDVVQLLKKELQTTVNNPDQDKAMQYRQLLIKTIRTVAVNFVEMAASVVSLLLDFIG 411
Query: 357 IKVNYVVQEAIIV-IKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAE 413
+N V II IK++ +YP +I+ + ++LD + +A +WI+GEYAE
Sbjct: 412 -DLNSVAASGIIAFIKEVIEKYPQLRANILENMVQTLDKVRSAKAYRGALWIMGEYAE 468
>sp|Q6FM46|COPB_CANGA Coatomer subunit beta OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC26 PE=3
SV=1
Length = 972
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 168/392 (42%), Gaps = 49/392 (12%)
Query: 45 ILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAIC 104
IL N D Q PN IR +R + +R ++ E + CL+ YVRK A +
Sbjct: 101 ILVCNAIQHDLQHPNEFIRGNTLRFLTKLREPELLEQMVPSTLACLEYRHAYVRKYAILA 160
Query: 105 VAKLYDINAELVED-RGFLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITS--- 160
V +Y ++ L+ D + + + L+++ +P+ NA L+E++ +++ +
Sbjct: 161 VLSIYKVSEHLLPDAKEIINTF--LLAETDPICKRNAFLGLSELDRDNALQYLQDNIDDI 218
Query: 161 HTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVLSAMI 220
+L LL A A ++ DA + TP L+ C ++L +
Sbjct: 219 ESLDPLLQA--------------AFVQFIRKDAIQ--------TPALKSQYCDLLLELLA 256
Query: 221 LQQM-ELITSTDVVRNLCKKMAPPLVTLLS---------AEPEIQYVALRNINLIVQRRP 270
E++ T + + L+ +S ++ ++ + L I I +R P
Sbjct: 257 SATADEVVFETALALTILSGNQTVLIKAVSKMIDLAVKVSDNNVKIIVLDRIQDINERNP 316
Query: 271 TILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVL-LEFKEYATEV------- 321
L + + + I V+ + L I + L + RNI+ V+ L KE T V
Sbjct: 317 GCLEELTLDILRVLNAEDIDVRSKALTIAMDLVTSRNIEDVVQLLKKELQTTVINNEKEK 376
Query: 322 DVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIV-IKDIFRRYPNT 380
D+ ++ I A++ E A +S+LL+ I +N V +I +KD+ YP
Sbjct: 377 SSDYRSLLIKTIRGIAVRFEEIAANIVSLLLDFIT-DLNSVAANGVIAFVKDVVELYPQL 435
Query: 381 YESIIATLCESLDTLDEPEAKASMIWIIGEYA 412
+I+ L L++++ +A +WI+GEY+
Sbjct: 436 RSNILENLIAKLESVNSAKAYRGALWILGEYS 467
>sp|P91926|AP2A_DROME AP-2 complex subunit alpha OS=Drosophila melanogaster
GN=alpha-Adaptin PE=1 SV=1
Length = 940
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 178/846 (21%), Positives = 336/846 (39%), Gaps = 116/846 (13%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ + DL L + + D Q NP+
Sbjct: 67 LGHDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIRLIIQSIKNDLQSRNPVH 126
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA++ + I + E + + + L D V+++AA+C+ +L+ + +++
Sbjct: 127 VNLALQCIANIGSRDMAESFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRSSPDIIPGGE 186
Query: 121 FLESLKDLISDNNPMVVANAVA---ALAEIEENSSRPIFEITSHTLSKLLTA----LNEC 173
+ + L++D + VV A + AL + + + + LS+++TA L +
Sbjct: 187 WTSRIIHLLNDQHMGVVTAATSLIDALVKRNPDEYKGCVNLAVSRLSRIVTASYTDLQDY 246
Query: 174 TE------WGQVFILDALSRY---------KAADAREAENIVERV-----TPRLQHANCA 213
T W V +L L Y +A E I+ + + ++QH+N
Sbjct: 247 TYYFVPAPWLSVKLLRLLQNYNPVTEEAGVRARLNETLETILNKAQEPPKSKKVQHSNAK 306
Query: 214 VVLSAMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALRNINLIVQ---RR 269
+A++ + + LI +D NL + L LS E ++Y+AL ++ +
Sbjct: 307 ---NAVLFEAINLIIHSDSEPNLLVRACNQLGQFLSNRETNLRYLALESMCHLATSEFSH 363
Query: 270 PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRK 328
+ H E+ + K + V+ ++++ + N ++++ E Y D +
Sbjct: 364 EEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLETADYSIREE 423
Query: 329 AVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATL 388
V + A K + V+L LI+I +YV +E + I T+
Sbjct: 424 MVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINREEVQGYAAKTV 483
Query: 389 CESLDTLDEPEAKASMI----WIIGEYAERI--DNADELLESF--LESFPEEPAQVQLQL 440
E+L P +M+ +I+GE+ I D+ L F L S + + L
Sbjct: 484 FEALQA---PACHENMVKVGGYILGEFGNLIAGDSRSAPLVQFKLLHSKYHLCSPMTRAL 540
Query: 441 LTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRL---LSTDPEAAKDV 497
L +T F+ E + V ++ + + + +L+ RA Y +L STD A
Sbjct: 541 LLSTYIKFINLFPEIRTNIQDVFRQHSNLRSADAELQQRASEYLQLSIVASTDVLA---T 597
Query: 498 VLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKP---PEAFVTRVKTTASRTDDEDY 554
VL E P + + + +A L KP PE + K+ A T
Sbjct: 598 VLEEMPSFPERESSI-----------LAVLKK--KKPGRVPENEIRESKSPAPLT----- 639
Query: 555 PNGSEQGYSDAPTHVADEGASPQTSSSNAPYAATRQPAPP-----PAAPVSPPVPDLLGD 609
S A + + + ++SNA PP + + + D+LGD
Sbjct: 640 --------SAAQNNALVNNSHSKLNNSNANTDLLGLSTPPSNNIGSGSNSNSTLIDVLGD 691
Query: 610 LIGLDNSAAIVPADQAAASPVPALPVVLPASTGQGLQIG--AELTRQDGQVFYSMLFENN 667
+ G +++ V+ + LQIG +E + G++ + + N
Sbjct: 692 MYGSNSNNNSSAVYNTKKFLFKNNGVLFE---NEMLQIGVKSEFRQNLGRL--GLFYGNK 746
Query: 668 TQTPLDGF--MIQFN-KNTFGLAAGGALQVPQLQPGTSGRTLLPMVLFQNMSAGPPSSLL 724
TQ PL F ++Q++ ++ L + P L+ G + LL ++ + P +
Sbjct: 747 TQVPLTNFNPVLQWSAEDALKLNVQMKVVEPTLEAGAQIQQLLTAECIEDYADAPT---I 803
Query: 725 QVAVKNN--QQPVWYFNDKISLHV-LFTEDGRMERGSFLETWRSLPD----SNEVLK--- 774
+++ + N QQ F+ K+ L V F E M SF W++L S +V K
Sbjct: 804 EISFRYNGTQQK---FSIKLPLSVNKFFEPTEMNAESFFARWKNLSGEQQRSQKVFKAAQ 860
Query: 775 --DLPG 778
DLPG
Sbjct: 861 PLDLPG 866
>sp|A0JN39|COPB_BOVIN Coatomer subunit beta OS=Bos taurus GN=COPB1 PE=1 SV=1
Length = 953
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 182/448 (40%), Gaps = 73/448 (16%)
Query: 25 LKKLVYLYLINYAKSQPD-----LAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQ 255
+ + LQ ++ AV A A LVTL SA I+
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA----------------------AGTLVTLSSAPTAIK 279
Query: 256 -----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVKME 293
Y+ L N+ LIV R L AHE + + + V+ +
Sbjct: 280 AAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKK 339
Query: 294 KLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERAAE 345
L++ + L S RN++++++ K+ + D D R+ VR + C+++ A
Sbjct: 340 TLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAA 399
Query: 346 RCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMI 405
I VL+E + + + +++ +R+ N I+ + E + + +
Sbjct: 400 NVIPVLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGAL 459
Query: 406 WIIGEYAERIDNADELLESFLESFPEEP 433
WI+GEY D+ ++ S E P
Sbjct: 460 WILGEYCSTKDDIQSVMTEVRRSLGEIP 487
>sp|Q9JIF7|COPB_MOUSE Coatomer subunit beta OS=Mus musculus GN=Copb1 PE=1 SV=1
Length = 953
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 182/448 (40%), Gaps = 73/448 (16%)
Query: 25 LKKLVYLYLINYAKSQPD-----LAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQ 255
+ + LQ ++ AV A A LVTL SA I+
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA----------------------AGTLVTLSSAPTAIK 279
Query: 256 -----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVKME 293
Y+ L N+ LIV R L AHE + + + V+ +
Sbjct: 280 AAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPAHERVLQDLVMDILRVLSTPDLEVRKK 339
Query: 294 KLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERAAE 345
L++ + L S RN++++++ K+ + D D R+ VR + C+++ A
Sbjct: 340 TLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAA 399
Query: 346 RCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMI 405
I VL+E + + + +++ +R+ N I+ + E + + +
Sbjct: 400 NVIPVLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGAL 459
Query: 406 WIIGEYAERIDNADELLESFLESFPEEP 433
WI+GEY ++ ++ S E P
Sbjct: 460 WILGEYCSTKEDIQSVMTEVRRSLGEIP 487
>sp|D2SW95|COPB_PIG Coatomer subunit beta OS=Sus scrofa GN=COPB1 PE=2 SV=1
Length = 953
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 182/448 (40%), Gaps = 73/448 (16%)
Query: 25 LKKLVYLYLINYAKSQPD-----LAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQ 255
+ + LQ ++ AV A A LVTL SA I+
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA----------------------AGTLVTLSSAPTAIK 279
Query: 256 -----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVKME 293
Y+ L N+ LIV R L AHE + + + V+ +
Sbjct: 280 AAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKK 339
Query: 294 KLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERAAE 345
L++ + L S RN++++++ K+ + D D R+ VR + C+++ A
Sbjct: 340 TLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAA 399
Query: 346 RCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMI 405
I VL+E + + + +++ +R+ N I+ + E + + +
Sbjct: 400 NVIPVLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGAL 459
Query: 406 WIIGEYAERIDNADELLESFLESFPEEP 433
WI+GEY ++ ++ S E P
Sbjct: 460 WILGEYCSTKEDIQSVMTEVRRSLGEIP 487
>sp|P53618|COPB_HUMAN Coatomer subunit beta OS=Homo sapiens GN=COPB1 PE=1 SV=3
Length = 953
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 182/448 (40%), Gaps = 73/448 (16%)
Query: 25 LKKLVYLYLINYAKSQPD-----LAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQ 255
+ + LQ ++ AV A A LVTL SA I+
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA----------------------AGTLVTLSSAPTAIK 279
Query: 256 -----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVKME 293
Y+ L N+ LIV R L AHE + + + V+ +
Sbjct: 280 AAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKK 339
Query: 294 KLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERAAE 345
L++ + L S RN++++++ K+ + D D R+ VR + C+++ A
Sbjct: 340 TLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAA 399
Query: 346 RCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMI 405
I VL+E + + + +++ +R+ N I+ + E + + +
Sbjct: 400 NVIPVLMEFLSDNNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGAL 459
Query: 406 WIIGEYAERIDNADELLESFLESFPEEP 433
WI+GEY ++ ++ S E P
Sbjct: 460 WILGEYCSTKEDIQSVMTEIRRSLGEIP 487
>sp|P23514|COPB_RAT Coatomer subunit beta OS=Rattus norvegicus GN=Copb1 PE=1 SV=1
Length = 953
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 182/448 (40%), Gaps = 73/448 (16%)
Query: 25 LKKLVYLYLINYAKSQPD-----LAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFENLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQ 255
+ + LQ ++ AV A A LVTL SA I+
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA----------------------AGTLVTLSSAPTAIK 279
Query: 256 -----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVKME 293
Y+ L N+ LIV R L AHE + + + V+ +
Sbjct: 280 AAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPAHERVLQDLVMDILRVLSTPDLEVRKK 339
Query: 294 KLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERAAE 345
L++ + L S RN++++++ K+ + D D R+ VR + C+++ A
Sbjct: 340 TLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAA 399
Query: 346 RCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMI 405
I VL+E + + + +++ +R+ N I+ + E + + +
Sbjct: 400 NVIPVLMEFLSDSNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGAL 459
Query: 406 WIIGEYAERIDNADELLESFLESFPEEP 433
WI+GEY ++ ++ S E P
Sbjct: 460 WILGEYCSTKEDIQSVMTEVRRSLGEIP 487
>sp|Q5R922|COPB_PONAB Coatomer subunit beta OS=Pongo abelii GN=COPB1 PE=2 SV=1
Length = 953
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 181/448 (40%), Gaps = 73/448 (16%)
Query: 25 LKKLVYLYLINYAKSQPD-----LAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+ + +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVDEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKACHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQ 255
+ + LQ ++ AV A A LVTL SA I+
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA----------------------AGTLVTLSSAPTAIK 279
Query: 256 -----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVKME 293
Y+ L N+ LIV R L AHE + + + V+ +
Sbjct: 280 AAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKK 339
Query: 294 KLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERAAE 345
L++ + L S RN++++++ K+ + D D R+ VR + C+++ A
Sbjct: 340 TLQLALDLVSSRNVEELVIVLKKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAA 399
Query: 346 RCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMI 405
I VL+E + + + +++ +R+ N I+ + E + + +
Sbjct: 400 NVIPVLMEFLSDNNEAAAADVLEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGAL 459
Query: 406 WIIGEYAERIDNADELLESFLESFPEEP 433
WI+GEY ++ ++ S E P
Sbjct: 460 WILGEYCSTKEDIQSVMTEIRRSLGEIP 487
>sp|Q5ZIA5|COPB_CHICK Coatomer subunit beta OS=Gallus gallus GN=COPB1 PE=2 SV=1
Length = 953
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 182/448 (40%), Gaps = 73/448 (16%)
Query: 25 LKKLVYLYLINYAKSQPD-----LAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGRLLQEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQ 255
+ + LQ ++ AV A A LVTL SA I+
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA----------------------AGTLVTLSSAPTAIK 279
Query: 256 -----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVKME 293
Y+ L N+ LIV R L +HE + + + V+ +
Sbjct: 280 AAAQCYIDLIIKESDNNVKLIVLDRLVELKEHPSHERVLQDLVMDILRVLSTPDLEVRKK 339
Query: 294 KLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERAAE 345
L++ + L S RN++++++ K+ + D D R+ VR + C+++ A
Sbjct: 340 TLQLALDLVSSRNVEELVIVLKKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAA 399
Query: 346 RCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMI 405
I VL+E + + + +++ +R+ N I+ + E + + +
Sbjct: 400 NVIPVLMEFLSDNNEAAAADVLEFVREAIQRFDNLRPLIVEKMLEVFHAIKSVKIYRGAL 459
Query: 406 WIIGEYAERIDNADELLESFLESFPEEP 433
WI+GEY ++ ++ S E P
Sbjct: 460 WILGEYCSTKEDIQSVMTEVRRSLGEIP 487
>sp|Q54HL0|COPG_DICDI Coatomer subunit gamma OS=Dictyostelium discoideum GN=copG PE=1
SV=1
Length = 898
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 96/519 (18%), Positives = 224/519 (43%), Gaps = 51/519 (9%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + +F Q++++ L++L+YL L + D AI+ +++ KD L RA
Sbjct: 63 EATDIFFAATKLFQSKDIPLRRLMYLLLKELSTISQD-AIIVISSLTKDMSHKIELYRAN 121
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESL 125
A+R + I I + ++ + + DP+V A + L + E+V + + +
Sbjct: 122 AIRILCKITDSSILPQIERYFKQSIVEKDPHVSSAALVSSIHLLKVCPEIV--KRWANEV 179
Query: 126 KDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFILDAL 185
++ IS+ + MV +A+A L I+++ + ++ S+ + L + + Q +++
Sbjct: 180 QEAISNKSNMVQYHALALLHRIKQHDRLAVSKLVSNLIKNSLRS-----PYAQSYLIRC- 233
Query: 186 SRYKAADAREAENIVERVTPRLQHANCAVVLSAMILQQMELITSTDVVRNLCKKMAPPLV 245
+ E N +R+ R +C + M+ E S +N+ K V
Sbjct: 234 ----CVEVIEETNTEDRIF-REYIESCLRSKNEMV--AYEAARSICTFKNVSNKEINSAV 286
Query: 246 TLL-----SAEPEIQYVALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKL----- 295
+L S +P +++ A+R +N + Q PT + P + ME L
Sbjct: 287 GVLQNFLNSTKPTLRFAAVRTLNKLAQTNPTAVI------------PCNLDMENLITDTN 334
Query: 296 --------EIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERC 347
++K+ ++ N+++++ + + +++ +F V AI + K + +
Sbjct: 335 RSIATLAITTLLKVGNESNVERLIKQIANFLGDINDEFKIVVVDAITSLSQKFPKKYKHL 394
Query: 348 ISVLLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIW 406
I L ++++ + +++A + I + P + E + LC+ ++ D P+ ++
Sbjct: 395 IIFLNKILRDEGTLQLKQATLDAILTVVNNIPESKEIALTELCDYIEDCDFPDLSVQILH 454
Query: 407 IIGEYAERIDNADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNN 466
+IG+ + + + + ++ +T+ K L E ++ + ++L
Sbjct: 455 LIGQEGPLTSSPAQYMRYIYNRVLLDGGIIRAAAVTSIAKFGL--LYEPMKEKVVILLQR 512
Query: 467 ATVETDNPDLRDRAYIYWRLLS-TDPEAAKDVVLAEKPV 504
++ D+ ++RDRA +Y +L D V++ + PV
Sbjct: 513 CLLDEDD-EVRDRATLYLKLFKENDVRYLNKVLMDDVPV 550
>sp|P45437|COPB_DROME Coatomer subunit beta OS=Drosophila melanogaster GN=betaCop PE=2
SV=2
Length = 964
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 178/435 (40%), Gaps = 80/435 (18%)
Query: 21 ENLELKKLVYLYLINYAKSQPDLA-----ILAVNTFVKDSQDPNPLIRALAVRTMGCIRV 75
+N +KKL+ ++ K+ D IL + + KD Q PN +R +R + ++
Sbjct: 68 QNHTIKKLLLIFWEIVPKTSADGKLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCKLKE 127
Query: 76 DKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVED-----RGFLESLKDLIS 130
++ E L ++ CL YVR+ A + + +Y LV D FL++ +D+
Sbjct: 128 PELLEPLMPAIRACLDHRHSYVRRNAVLAIFTIYKNFDWLVPDGPELIASFLDTQQDMSC 187
Query: 131 DNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSR 187
N A L + + R L+ L + +++ +G Q+ I++ +
Sbjct: 188 KRN--------AFLMLLHADQER--------ALNYLASCIDQVHTFGDILQLVIVELI-- 229
Query: 188 YKAADAREAENIVERVTPRLQHANCAVVLSAMILQQMELITSTDVVRNLCKKMAPPLVTL 247
YK A AE R + C L L +S++ VR + A L+TL
Sbjct: 230 YKVCHANPAE--------RSRFIRCIYNL---------LNSSSNAVR---YESAGTLITL 269
Query: 248 LSAEPEIQ-----YVAL------RNINLIVQRRPTILA-HE----------IKVFFCKYN 285
A I+ Y+ L N+ LIV R + HE + V
Sbjct: 270 SLAPTAIKAAASCYIELVVKESDNNVKLIVLDRLVAMKEHEGMEKVMQDLVMDVLRVLAA 329
Query: 286 DPIYVKMEKLEIMIKLASDRNIDQVLLEFK-EYATEVDVD------FVRKAVRAIGRCAI 338
I V+ + L + + L RNI +++L K E A +V+ + + VR + C+I
Sbjct: 330 PDIEVRRKTLALALDLVYSRNIGEMVLVLKKEVAKTHNVEHEDTGKYRQLLVRTLHTCSI 389
Query: 339 KLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEP 398
K A I VL+E + + +I I++ +++P II L E+ +
Sbjct: 390 KFPDVAANVIPVLVEFLSDTNELAAADVLIFIREAIQKFPALRALIIEHLIEAFPQIKSS 449
Query: 399 EAKASMIWIIGEYAE 413
+ + +WI+GEY E
Sbjct: 450 KIHRAAVWILGEYVE 464
>sp|Q66HV4|COPB_DANRE Coatomer subunit beta OS=Danio rerio GN=copb1 PE=2 SV=1
Length = 953
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 181/448 (40%), Gaps = 73/448 (16%)
Query: 25 LKKLVYLYLINYAKSQPDLA-----ILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKIT 79
+KKL+ ++ K+ PD IL + + KD Q PN IR +R + ++ ++
Sbjct: 74 IKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKESELL 133
Query: 80 EYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKD-LISDNNPMVVA 138
E L ++ CL+ YVR+ A + + +Y L+ D E + D L+++ +
Sbjct: 134 EPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAP--ELIHDFLVNEKDASCKR 191
Query: 139 NAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWG---QVFILDALSRYKAADARE 195
NA L +++ + L L T +++ +G Q+ I++ + + A+ E
Sbjct: 192 NAFMMLIHADQDRA----------LDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPSE 241
Query: 196 AENIVERVTPRLQHANCAVVLSAMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQ 255
+ + LQ ++ AV A A LVTL SA I+
Sbjct: 242 RARFIRCIYNLLQSSSPAVKYEA----------------------AGTLVTLSSAPTAIK 279
Query: 256 -----YVAL------RNINLIVQRRPTIL----AHE-------IKVFFCKYNDPIYVKME 293
Y+ L N+ LIV R L HE + + + V+ +
Sbjct: 280 AAAQCYIDLIIKESDNNVKLIVLDRLIELKEHPTHERVLQDLVMDILRVLTTPDLEVRKK 339
Query: 294 KLEIMIKLASDRNIDQVLLEFKEYATEV-------DVDFVRKA-VRAIGRCAIKLERAAE 345
L++ + L S RN++++++ K+ + D D R+ VR + C+++ A
Sbjct: 340 TLQLALDLVSSRNVEELVIVLKKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAA 399
Query: 346 RCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMI 405
I VL+E + + + +++ +R+ N II + E + + +
Sbjct: 400 NVIPVLMEFLSDTNEAAAADVLEFVREAIQRFDNLRPLIIEKMLEVFHAIKTVKIYRGAL 459
Query: 406 WIIGEYAERIDNADELLESFLESFPEEP 433
WI+GEY ++ ++ S E P
Sbjct: 460 WILGEYCSTKEDIQSVMTEVRRSLGEIP 487
>sp|Q99128|AP1G1_USTMA AP-1 complex subunit gamma-1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=APL4 PE=3 SV=2
Length = 853
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 133/630 (21%), Positives = 246/630 (39%), Gaps = 99/630 (15%)
Query: 26 KKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDP 85
K+L YL ++ ++ L N D + N + LA+ T I ++++ LC+
Sbjct: 84 KRLGYLGIMLLLDENTEVLTLVTNGLKNDMEHSNMYVCGLALCTFANIASEEMSRDLCNE 143
Query: 86 LQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMVVANAVAALA 145
+++ + + Y+R+ AAIC ++ +L++ F++ + L+SD N V+ AV
Sbjct: 144 IEKLMGSSNTYIRRKAAICAMRIVRKVPDLIDH--FVDRTQQLLSDKNHGVLLCAVTLAI 201
Query: 146 EI--EENSSRPIFE-----ITSHTLSKLLTALN-ECTEWG------QVFILDALSRYKAA 191
EI +++ + ++ + H S + T + E G QV IL L
Sbjct: 202 EICRQDDEALTVYRRAVPLLVQHLKSLVTTGYSPEHDVSGITDPFLQVKILRLLRILGKE 261
Query: 192 DAREAENIVERVTPRLQHANCAVVLSAMILQQMELITSTDVVRNLCKKMAPPLVT--LLS 249
+A+ +E + + + + + + IL + L N + MA ++ L +
Sbjct: 262 NAQASETMNDILAQVATNTEASKNVGNSILYETVLTILEIDADNGLRVMAINILGKFLSN 321
Query: 250 AEPEIQYVALRNINLIVQRRPT-ILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNID 308
+ I+YVAL ++ +V + H + C + I ++ LE+ L ++ N+
Sbjct: 322 RDNNIRYVALNTLSKVVSMDTNAVQRHRNIILDCLRDGDISIRRRALELSYALINESNVR 381
Query: 309 QVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAII 368
+ E + D +F I A K I +L ++K+ NYV +E
Sbjct: 382 VLTRELLSFLEVADNEFKLGMTTQICLAAEKFAPNKRWHIDTVLRVLKLAGNYVREE--- 438
Query: 369 VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASM----IWIIGEYAERIDNAD----- 419
++ R +T E T+ + L + ++ S+ +W+IGE+ + +
Sbjct: 439 ILSAFIRLVCHTPELQAYTVQKLFSGLHQDFSQESLTLAAVWVIGEFGDVLIQGGNFEDE 498
Query: 420 ------------ELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNA 467
+LL S L+S P ++ +LT+ KL + Q I+ ++ A
Sbjct: 499 ELVREVQPKDVVDLLSSVLDS-PYVNGLIRQFVLTSLAKLHTRLSDASQQSRIEQII--A 555
Query: 468 TVETD-NPDLRDRAYIYWRLLSTDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLANIAT 526
+ ET +++ R+ + LL + VL P
Sbjct: 556 SFETSVEVEIQQRSVEFATLLKRSD--IRQGVLESMP----------------------- 590
Query: 527 LSSVYHKPPEAFVTRVKTTASRTDDEDYPNGSEQGYSDAPTH-VADE---GASPQTSSSN 582
PPE +K T T E P GS + DA + DE + T + N
Sbjct: 591 -------PPE-----IKQTVLGTVSEAKPVGSTRSDKDALLDLMGDEMPVTSGGGTGADN 638
Query: 583 APYAATRQPAPPPAAPVSPPVPDLLGDLIG 612
AP AT+Q DLL D+ G
Sbjct: 639 APSGATQQ-----------STHDLLADIFG 657
>sp|Q6Z382|COPG2_ORYSJ Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica
GN=Os07g0201100 PE=2 SV=1
Length = 889
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 105/513 (20%), Positives = 219/513 (42%), Gaps = 47/513 (9%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + +F Q+++ L+++VYL +I D I+ ++ +KD + RA
Sbjct: 68 EATEVFFATTKLFQSKDAGLRRMVYL-MIKELSPSADEVIIVTSSLMKDMNSKTDMYRAN 126
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLK----DDDPYVRKTAAICVAKLYDINAELVEDRGF 121
A+R + C +D L ++R LK D +P V A + L + E+V + +
Sbjct: 127 AIRVL-CRIIDST---LLTQIERYLKQAIVDKNPVVASAALVSGIYLLQTSPEVV--KRW 180
Query: 122 LESLKDLISDNNPMVVANAVAALAEIEENSSRPIFE-ITSHTLSKLLTALNECTEWGQVF 180
+++ + +V +A+A L +I +N + + +TS T + + L +C
Sbjct: 181 SNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGSVRSPLAQCL------ 234
Query: 181 ILDALSRYKAADAREAE-NIVERVTPRLQHANCAVVLSA--MILQQMELITSTDVV--RN 235
L RY + RE+ N P + A +IL+ IT + V R
Sbjct: 235 ----LIRYTSQVIRESSMNSQGGDRPFFDFLESCLRNKAEMVILEAARAITELNGVTSRE 290
Query: 236 LCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRPTILAH---EIKVFFCKYNDPIYVKM 292
L + + L S++P +++ A+R +N + P + + +++ N I
Sbjct: 291 LTPAITVLQLFLSSSKPVLRFAAVRTLNKVASTHPLAVTNCNIDMESLISDQNRSIATL- 349
Query: 293 EKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLL 352
+ ++K ++ ++D+++ + + +++ +F V AI +K ++ L
Sbjct: 350 -AITTLLKTGNESSVDRLMKQMTNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLS 408
Query: 353 ELIKIKVNY-----VVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWI 407
+++ + + +V II+I+DI P+ ES + LCE ++ + ++
Sbjct: 409 NILREEGGFEYKKAIVDSIIILIRDI----PDAKESGLFHLCEFIEDCEFTYMSTQILHF 464
Query: 408 IGEYAERIDNADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNA 467
+G + + + + E A V+ ++ K + P+ I V+L
Sbjct: 465 LGNEGPKTSDPSKYIRYIYNRVILENATVRASAVSTLAKFGALVDSLKPR--IFVLLRRC 522
Query: 468 TVETDNPDLRDRAYIYWRLL---STDPEAAKDV 497
+ D+ ++RDRA +Y +LL +T E KDV
Sbjct: 523 LFDGDD-EVRDRATLYLKLLGGEATVGETEKDV 554
>sp|Q29G21|COPB_DROPS Coatomer subunit beta OS=Drosophila pseudoobscura pseudoobscura
GN=betaCop PE=3 SV=2
Length = 965
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 164/406 (40%), Gaps = 75/406 (18%)
Query: 45 ILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAIC 104
IL + + KD Q PN +R +R + ++ ++ E L ++ CL YVR+ A +
Sbjct: 96 ILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPLMPAIRACLDHRHSYVRRNAVLA 155
Query: 105 VAKLYDINAELVED-----RGFLESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEIT 159
+ +Y LV D FL++ +D+ N A L + + R
Sbjct: 156 IFTIYKNFDWLVPDGPELIANFLDTQQDMSCKRN--------AFLMLLHADQER------ 201
Query: 160 SHTLSKLLTALNECTEWG---QVFILDALSRYKAADAREAENIVERVTPRLQHANCAVVL 216
L+ L + +++ +G Q+ I++ + YK A AE R + C L
Sbjct: 202 --ALNYLASCIDQVHSFGDILQLVIVELI--YKVCHANPAE--------RSRFIRCIYNL 249
Query: 217 SAMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQ-----YVAL------RNINLI 265
L +S++ VR + A L+TL A I+ Y+ L N+ LI
Sbjct: 250 ---------LNSSSNAVR---YESAGTLITLSLAPTAIKAAASCYIELIVKESDNNVKLI 297
Query: 266 VQRRPTILAHE-----------IKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEF 314
V R + + V I V+ + L + + L RNI +++L
Sbjct: 298 VLDRLIAMKENENMEKVMQDLVMDVLRVLAAPDIEVRRKALALAMDLVYSRNIGEMVLVL 357
Query: 315 K-EYATEVDVD------FVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAI 367
K E A +V+ + + VR + C+IK A I VL+E + + +
Sbjct: 358 KKEVAKTHNVEHEDTGKYRQLLVRTLHTCSIKFPDVAATVIPVLVEFLSDTNELAAADVL 417
Query: 368 IVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAE 413
I I++ +++P II L E+ + + + +WI+GEY E
Sbjct: 418 IFIREAIQKFPALSGLIIEHLIEAFPQIKSSKIHRAAVWILGEYVE 463
>sp|Q8H852|COPG1_ORYSJ Coatomer subunit gamma-1 OS=Oryza sativa subsp. japonica
GN=Os03g0227000 PE=2 SV=2
Length = 884
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 105/505 (20%), Positives = 215/505 (42%), Gaps = 43/505 (8%)
Query: 6 DVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRAL 65
+ + +F V Q+++ L++LVYL +I D I+ ++ +KD + RA
Sbjct: 66 EATEVFFAVTKLFQSKDAGLRRLVYL-MIKELSPSSDEVIIVTSSLMKDMNSKTDMYRAN 124
Query: 66 AVRTMGCIRVDKITEYLCDPLQRCLK----DDDPYVRKTAAICVAKLYDINAELVEDRGF 121
A+R + C +D L ++R LK D +P V A + L N E+V + +
Sbjct: 125 AIRVL-CRIIDGT---LLTQIERYLKQAIVDKNPVVASAALVSGIHLLQANPEIV--KRW 178
Query: 122 LESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSH-TLSKLLTALNECTEWGQVF 180
+++ + +V + +A L +I +N I ++ S T + + L +C
Sbjct: 179 SNEVQEAVQSRFALVQFHGLALLHQIRQNDRLAISKMVSGLTRGSVRSPLAQCL------ 232
Query: 181 ILDALSRYKAADAREAE-NIVERVTPRLQH-ANCAVVLSAM-ILQQMELITSTDVVRNLC 237
L RY + RE+ N P + +C S M IL+ I DV
Sbjct: 233 ----LIRYTSQVIRESSMNTQTSDRPFFDYLESCLRHKSEMVILEAARKIAEMDVT---S 285
Query: 238 KKMAPPLVTLL----SAEPEIQYVALRNINLIVQRRPTILAH---EIKVFFCKYNDPIYV 290
+++AP + L S++P +++ A+R +N + RP + + +++ N I
Sbjct: 286 RELAPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTRPLAVTNCNVDLESLMSDQNRSIAT 345
Query: 291 KMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISV 350
+ ++K ++ ++D+++ + + +++ +F V AI +K ++
Sbjct: 346 L--AITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSMMNF 403
Query: 351 LLELIKIKVNYVVQEAII-VIKDIFRRYPNTYESIIATLCESLDTLDEPEAKASMIWIIG 409
L ++ + + ++AI+ I + P+ E + LCE ++ + + ++ ++G
Sbjct: 404 LSNSLREEGGFEYKKAIVDSIVTLISEIPDAKEIGLLYLCEFIEDCEFTYLSSQILHLLG 463
Query: 410 EYAERIDNADELLESFLESFPEEPAQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATV 469
R + + E A V+ ++ K P+ I V+L
Sbjct: 464 NEGPRTSDPSRYIRYIYNRVILENATVRASAVSTLAKFGALVDALKPR--IFVLLRRCLF 521
Query: 470 ETDNPDLRDRAYIYWRLLSTDPEAA 494
+TD+ ++RDRA +Y + L D E A
Sbjct: 522 DTDD-EVRDRATLYLQTL--DGEVA 543
>sp|Q7QG73|AP2A_ANOGA AP-2 complex subunit alpha OS=Anopheles gambiae GN=alpha-Adaptin
PE=3 SV=4
Length = 934
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 175/841 (20%), Positives = 325/841 (38%), Gaps = 112/841 (13%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+ + VN + + K++ YL++ + DL L + + D Q NP+
Sbjct: 67 LGHDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIKLIIQSIKNDLQSRNPIH 126
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPY--VRKTAAICVAKLYDINAELVEDRG 120
LA++ + I + E + + + L D V+++AA+C+ +L+ +++
Sbjct: 127 VNLALQCIANIGSQDMAEAFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRTCPDIIPGGE 186
Query: 121 FLESLKDLISDNNPMVVANAVA---ALAEIEENSSRPIFEITSHTLSKLLTA----LNEC 173
+ + L++D + VV A + AL + + + LS+++TA L +
Sbjct: 187 WTSRIIHLLNDQHMGVVTAATSLIDALVKKNPEEYKGCVSLAVSRLSRIVTASYTDLQDY 246
Query: 174 TE------WGQVFILDALSRY---------KAADAREAENIVERV-----TPRLQHANCA 213
T W V +L L Y + E I+ + + ++QH+N
Sbjct: 247 TYYFVPAPWLSVKLLRLLQNYNPPTEDPGVRGRLNECLETILNKAQEPPKSKKVQHSNAK 306
Query: 214 VVLSAMILQQMELITSTDVVRNLCKKMAPPLVTLLS-AEPEIQYVALRNINLIVQ---RR 269
+A++ + + LI D +L + L LS E ++Y+AL ++ +
Sbjct: 307 ---NAVLFEAINLIIHNDSEPSLLVRACNQLGQFLSNRETNLRYLALESMCHLATSEFSH 363
Query: 270 PTILAH-EIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRK 328
+ H E+ + K + V+ + ++++ + N ++++ E Y D +
Sbjct: 364 EAVKKHQEVVILSMKMEKDVSVRQQAVDLLYAMCDRSNAEEIVQEMLNYLETADYSIREE 423
Query: 329 AVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNTYESIIATL 388
V + A K + V+L LI+I +YV +E + I T+
Sbjct: 424 MVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINREEVQGYAAKTV 483
Query: 389 CESLDTLDEPEAKASMI----WIIGEYAERI--DNADELLESF--LESFPEEPAQVQLQL 440
E+L P +M+ +I+GE+ I D+ + F L S + + L
Sbjct: 484 FEALQA---PACHENMVKVGGYILGEFGNLIAGDSRSAPMVQFKLLHSKYHLCSSMTRAL 540
Query: 441 LTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRL---LSTDPEAAKDV 497
L +T F+ E + V ++ + + + +L+ RA Y +L STD A
Sbjct: 541 LLSTYIKFINLFPEIRGTIQDVFRQHSNLRSADAELQQRASEYLQLSIVASTDVLA---T 597
Query: 498 VLAEKPVISDDSNQLDPSLLDELLANIATLSSVYHKPPEAFVTRVKTTAS-RTDDEDYPN 556
VL E P + + + L+ + K P RV A R PN
Sbjct: 598 VLEEMPSFPERESSI--------------LAVLKKKKP----GRVPENAEIRETKSPVPN 639
Query: 557 GSEQGYSDAPTHVADEGASPQTSSSNAPYAATRQPAPPPAAPVSPPVPDLLGDLIGLDNS 616
+S+A T+ ++++ + + PPA+ S + D+LGD+ S
Sbjct: 640 SHNNAHSNAQTN------HTSSANNANASSDLLGLSTPPASQ-SGTLIDVLGDIY----S 688
Query: 617 AAIVPADQAAASPVPALPVVLPASTGQGLQIG--AELTRQDGQVFYSMLFENNTQTPLDG 674
A ++ S LQIG +E + G++ + + N TQT L
Sbjct: 689 TANGNSNVVNNSKKFVFKNNGVLFENDLLQIGVKSEFRQNLGRL--GLYYGNKTQTALQN 746
Query: 675 FMIQFNKNTFGLAAGGALQV--------PQLQPGTSGRTLLPMVLFQNMSAGPPSSLLQV 726
F+ T +A AL++ P L+ G + LL + G PS ++
Sbjct: 747 FV-----PTLQWSAEDALKLNVQIKAVEPTLEAGAQIQQLLTAECIDHY-LGAPSIVISF 800
Query: 727 AVKNNQQPVWYFNDKISLHVLFTEDGRMERGSFLETWRSLPDSNE----VLK-----DLP 777
V N ++++ F E M SF WR+L + V K DLP
Sbjct: 801 RVSGGAPQKITVNLPLTINKFF-EPTEMNAESFFARWRNLGGEQQRAQRVFKAQQPLDLP 859
Query: 778 G 778
G
Sbjct: 860 G 860
>sp|P54362|AP3D_DROME AP-3 complex subunit delta OS=Drosophila melanogaster GN=g PE=1
SV=4
Length = 1034
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 90/478 (18%), Positives = 199/478 (41%), Gaps = 41/478 (8%)
Query: 3 VGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLI 62
+G D+S +++ M + K++ YL +L +L N KD N
Sbjct: 69 LGYDISWAGFNIIEVMSSSRFTCKRIGYLAASQCFHPDSELLMLTTNMIRKDLNSQNQYD 128
Query: 63 RALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFL 122
+A+ + C ++ L + + + PY+R A + + K++ E + R
Sbjct: 129 AGVALSGLSCFISPDLSRDLANDIMTLMSSTKPYLRMKAVLMMYKVFLRYPEAL--RPAF 186
Query: 123 ESLKDLISDNNPMVVANAVAALAEIEENSSRPIFEITSHTLSKLLTALNECTEWGQVFIL 182
LK+ + D +P V + AV + E+ + + + + T+ N W + I+
Sbjct: 187 PKLKEKLEDPDPGVQSAAVNVICELARKNPKNYLPLAPIFFKLMTTSTN---NWMLIKII 243
Query: 183 DALSRYKAADAREAENIVERVTPRLQHANCAVVL--------SAMILQQMELITSTDVVR 234
+ R + ++E +T L H+ A+ L A+++ + +
Sbjct: 244 KLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECINTVIAVLISISSGMPNHSASI 302
Query: 235 NLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQRRP-TILAHEIKVFFCKYNDPIYVKME 293
LC + L+ ++ ++Y+ L ++ I++ P ++ AH+ + C + +++
Sbjct: 303 QLCVQKLRILIE--DSDQNLKYLGLLAMSKILKTHPKSVQAHKDLILACLDDKDESIRLR 360
Query: 294 KLEIMIKLASDRNIDQVL------LEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERC 347
L+++ + S +N+ +++ +E E + D + + K + + + E
Sbjct: 361 ALDLLYGMVSKKNLMEIVKRLLGHMERAEGSAYRD-ELLYKVIEICAQSSYLYVTNFEWY 419
Query: 348 ISVLLELIKIKV----NYVVQEAIIVIKDIFRRYPNTYESIIATLCESLDTLDEPEAKAS 403
++VL+ELI+++ ++ E ++ D+ R P + + + LDT S
Sbjct: 420 LTVLVELIQLEAGSRHGRLIAEQLL---DVAIRVPVVRQFAVNEMTNLLDTFTVSAQSNS 476
Query: 404 MI-------WIIGEYAERIDNADELLESFLESFPE-EPAQVQLQLLTATVKLFLKKPT 453
M WI+GE+A +++A++ L L P P +Q + +KLF + T
Sbjct: 477 MYEVLYAAAWIVGEFAGELEDAEKTLNILLR--PRLLPGHIQGVYVQNVIKLFARLAT 532
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 309,893,873
Number of Sequences: 539616
Number of extensions: 13160463
Number of successful extensions: 54970
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 292
Number of HSP's that attempted gapping in prelim test: 53308
Number of HSP's gapped (non-prelim): 1468
length of query: 860
length of database: 191,569,459
effective HSP length: 126
effective length of query: 734
effective length of database: 123,577,843
effective search space: 90706136762
effective search space used: 90706136762
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)