BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002997
(859 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WPJ7|RF298_ARATH Putative E3 ubiquitin-protein ligase RF298 OS=Arabidopsis thaliana
GN=RF298 PE=2 SV=1
Length = 814
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/856 (46%), Positives = 532/856 (62%), Gaps = 65/856 (7%)
Query: 8 KAGSCSVLS--LDKGSKNKRKVAEPSQMNPVNLPTSLTEFPRYQQSLEKPQNPLSYPPLS 65
K G+ S +S DKG KNKRK+A+PS N SLTEFPRY+ K Q+PL +
Sbjct: 18 KVGTSSSVSPPQDKGRKNKRKLADPSPQNAA----SLTEFPRYELHSFKSQSPLCE---N 70
Query: 66 DAGSSRGTEVDKEAECESGEWDDPIVCALGELLSSGLNTLFRNVIKQISECGYSEDDATK 125
D+ E E +S WDDP C L LLSS L TLFR+ + QI +CGYSED K
Sbjct: 71 DSNGQLKAE-----ESDSVGWDDPFACHLEGLLSSNLLTLFRSAMNQIMDCGYSEDVVLK 125
Query: 126 NIARHSIYCGGKDLVSNIVNDTLSALEKVKGTNSSRDEMFDNLQQMVDYTMLEMINVLRD 185
I+ YCGG DLVSNIVNDTLS L+ K SRD +F++LQQ+V Y+++E I+++R+
Sbjct: 126 AISSSRFYCGGTDLVSNIVNDTLSFLKSGKKVAGSRDYVFEDLQQLVAYSLVEKISLVRE 185
Query: 186 VKTSLSIAEAMWWLLMCDLNISQACTVEGDILSFLDSKEFSGESSSSSSPSQLRSEDQGS 245
V+ SLS EAMW LL+CDLN+ +A V+ D G SS S + SE +
Sbjct: 186 VRPSLSTDEAMWRLLICDLNVLKAFEVDAD-----------GLEGSSVSNASKSSESPVA 234
Query: 246 GTFPPNTSKSNVPRPSKPTEPSKFSKPGAKCSMSETLKFGSFPNMPNPRNSFVTEKMLPE 305
PP +S ++ P+ SK S+P +KFG+F N+ N +N P
Sbjct: 235 ECNPPKSSDADNPKAPVSNTQSKQSEP---------VKFGNFANVNNSKN--------PH 277
Query: 306 RDSLVSMAESVEKSLSSLGEHAQNMSLTLGSDERSGNGRKGRSKKELAILRQKSCHVPTE 365
E S +S GE ++ SLT SDE+ + RKGR+KKE+A+LRQKSC E
Sbjct: 278 ASGATPGKEVFSVSTAS-GEGTKSASLTSVSDEKLVSCRKGRTKKEMAMLRQKSC---VE 333
Query: 366 KSYRTYGKGAFRSGKLASMGGFVLEKRVRPASDLSAVHPKSGPSKISADTGAAAASRDRG 425
K RTY KG K A GGF++EKR + ASDL + ++ SKI+ + +
Sbjct: 334 K-IRTYSKGG--GYKTAKFGGFLVEKRGKSASDLLSAQARNSSSKITTEVM-------KI 383
Query: 426 HCASTRTPLAHPV-SDSPSSLPTKGTTLALPVPNTELVASSSSKKN--PDIKAVATTSPS 482
A + + L++ SDSP+ L K ALP N +S K P+ K +T P+
Sbjct: 384 PLAESSSTLSNSTKSDSPA-LDVKEHVTALPANNAPAPVASEKKSGSEPEEKPSVSTKPA 442
Query: 483 PKLPEYYAGIPFDETLGRYIPQNGKDELILKLVPWVPELQNELNSWTEWANQKVMQAARR 542
P +YYA IP+D TLG YIP+N +DELILKLVP + +LQ EL WT+WANQKV QA R
Sbjct: 443 P---DYYAAIPYDATLGIYIPRNKRDELILKLVPRMKDLQKELQDWTDWANQKVKQATVR 499
Query: 543 LSKDQAELKALRHEKQEVEQCQKDKQILEENTVKRLSEMEFALTNATAQVERSSSTVHTL 602
L KDQ ELKALR EK+E E+ +K+KQ+LEENT+KR SEME AL NAT Q+ER+++T+ L
Sbjct: 500 LLKDQPELKALRKEKEEAEEFRKEKQLLEENTIKRRSEMELALNNATNQLERTNNTIRRL 559
Query: 603 EMEHSVLKKEMEAANLRAAKSAVSCQEAFEREQKALKNAQSLEAQRVLLREELATEKQKV 662
E+E S+LK+E EAAN+RA++SA SC+EA ER Q+ LKN+QS E Q+ LL+EEL +++ KV
Sbjct: 560 ELEQSLLKREREAANIRASESAESCREAKERVQRLLKNSQSWEGQKNLLQEELKSQRDKV 619
Query: 663 AVLQQEISKAENRHNQLETRWREERMARENLLAQAAAIRNQREQLEAAAKAEEEMIKLEA 722
A LQQE++KA+ R NQ+E W++E+ A L AQAAA++ +R +LE KAEEE IK +A
Sbjct: 620 AGLQQEVAKAKTRQNQIEATWKQEKSATGKLTAQAAALKKERGKLEELGKAEEERIKTKA 679
Query: 723 EKEMSKLTEDIGKLESQLSLLKYKSDSSKIAALRGSVDGGFMPDGKIENPAMKKGSKIPG 782
E ++ E+I +L++++S LK KSDS KIAAL+ +DG DG +K
Sbjct: 680 ENDVKYYIENIKRLDTEISKLKLKSDSLKIAALKKGIDGN--NDGNKSGMNHTTNTKANS 737
Query: 783 LLMGGGSSSGSSLMGGLKRERECVVCLAEEKSVVFLPCAHQVLCQKCNELHEKQGMNDCP 842
+ + +KRERECV+CL+EE SV+FLPCAHQVLC KCN+LHEK+ M DCP
Sbjct: 738 MASAKVWENNQGAESKIKRERECVMCLSEEMSVIFLPCAHQVLCSKCNQLHEKEAMEDCP 797
Query: 843 SCRSPIQQRIQVRFAQ 858
SCR+ IQ+RIQ RFA+
Sbjct: 798 SCRAKIQRRIQARFAR 813
>sp|Q9ZVT8|RF4_ARATH Putative E3 ubiquitin-protein ligase RF4 OS=Arabidopsis thaliana
GN=RF4 PE=3 SV=1
Length = 823
Score = 630 bits (1626), Expect = e-179, Method: Compositional matrix adjust.
Identities = 394/884 (44%), Positives = 548/884 (61%), Gaps = 110/884 (12%)
Query: 6 ANKAGSCSVLSLDKGSKNKRKVAEPSQMNPVNLPTSLTEFPRYQQSLEKPQNPLSYPPLS 65
+K + +V +KG KNKRK+A+PSQ N +SLTEFP Y+ KPQN LS
Sbjct: 17 VDKVEAFTVSPQEKGRKNKRKLADPSQPNA----SSLTEFPPYELPSLKPQNHLS----- 67
Query: 66 DAGSSRGTEVDKEAECE---SGEWDDPIVCALGELLSSGLNTLFRNVIKQISECGYSEDD 122
G+ EV + + E S EWDDP C L ELLSS L TLF + +KQ+ + GY++D+
Sbjct: 68 --GNGSVGEVSNQLQVEVSESVEWDDPFACHLEELLSSNLLTLFLDTMKQLIDLGYTDDE 125
Query: 123 ATKNIARHSIYCGGKDLVSNIVNDTLSALEKVKGTNSSRDEMFDNLQQMVDYTMLEMINV 182
K ++R +YCGG +L+SNIVN+TLSAL+ S D +F++LQQ+V YT++EMI++
Sbjct: 126 VLKAVSRCRLYCGGNNLLSNIVNNTLSALKTGDEGAGSGDYVFEDLQQLVSYTLVEMISL 185
Query: 183 LRDVKTSLSIAEAMWWLLMCDLNISQACTVEGDILSFLDSKEFSGESSSSSSPSQLRSED 242
+++V+ SLS EAMW LLMCDLN+ QA EGD L SS SE
Sbjct: 186 IKEVRPSLSTVEAMWRLLMCDLNVLQAFEAEGDGLV--------------SSSKLSDSES 231
Query: 243 QGSGTFPPNTSKSNVPRPSKPTEPSKFSKPGAKCSMSETLKFGSFPNMPNPRNSFVTEKM 302
G+ + PP +S + P+P + S ++P LKFG+FPN PN + +
Sbjct: 232 LGAESNPPKSSDPDNPKPPQSDPQSNRNEP---------LKFGNFPNTPNSKKT------ 276
Query: 303 LPERDSLVSMAESVEKSLSSLGEHAQNMSLTLGSDERSGNGRKGRSKKELAILRQKSCHV 362
+ S + + V + + ++ S TL SDE+ + RKGR+KKE+A+LRQKSC
Sbjct: 277 ---QSSGTTPGKEVCSGSTVSCQGMRSTSFTLVSDEKLVSCRKGRTKKEIAMLRQKSC-- 331
Query: 363 PTEKSYRTYGKGA-FRSGKLASMGGFVLEKRVRPASDLSAVHPKSGPSKISADTGAAAA- 420
EK RTY KG+ +++ K AS+G F+LEKRV+ +S+ P++ SKI+A+ G +
Sbjct: 332 -VEK-IRTYSKGSGYKAAKFASVGSFLLEKRVKSSSEFV---PRNSSSKITAEIGVKVSL 386
Query: 421 SRDRGHCASTRTPLAHPVSDSPSSLPTKGTTLALPVPNTE-------------LVASSSS 467
+ D G + L PV + KG ALP + + L+ S+S
Sbjct: 387 AEDSGCFVRKNSKLDSPVV----VVDAKGYITALPARSVKSASKKKTGSESVTLIPSASE 442
Query: 468 KKNPDIKAVATT------------SPSPKL-PEYYAGIPFDETLGRYIPQNGKDELILKL 514
KK+ D +T+ S S KL P+YYAGIP+D LG Y+P++ KDELILKL
Sbjct: 443 KKS-DSSIPSTSEKKSGSESEEKASVSAKLAPDYYAGIPYDAALGIYVPRDKKDELILKL 501
Query: 515 VPWVPELQNELNSWTEWANQKVMQAARRLSKDQAELKALRHEKQEVEQCQKDKQILEENT 574
VP V +LQNEL WT+WANQKV +A RL KDQ ELKALR E++E EQ +K+KQ+LEENT
Sbjct: 502 VPRVNDLQNELQVWTDWANQKVKEATGRLLKDQPELKALRKEREEAEQYKKEKQLLEENT 561
Query: 575 VKRLSEMEFALTNATAQVERSSSTVHTLEMEHSVLKKEMEAANLRAAKSAVSCQEAFERE 634
KRLSEM+FAL NAT+Q+E++ +T H LE+E S+LKKEMEAA ++A +SA S +EA ER
Sbjct: 562 RKRLSEMDFALKNATSQLEKAFNTAHRLELEQSILKKEMEAAKIKAVESAESFREAKERG 621
Query: 635 QKALKNAQSLEAQRVLLREELATEKQKVAVLQQEISKAENRHNQLETRWREERMARENLL 694
+++LK+ S E Q+++L+EEL +++KV VLQ+E++KA+NR NQ+E ++ER A+ L
Sbjct: 622 ERSLKDIHSWEGQKIMLQEELKGQREKVTVLQKEVTKAKNRQNQIEAALKQERTAKGKLS 681
Query: 695 AQAAAIRNQREQLEAAAKAEEEMIKLEAEKEMSKLTEDIGKLESQLSLLKYKSDSSKIAA 754
AQA+ IR + ++LEA K EEE IK +AE ++ ++I +LE ++S LK KSD S+I A
Sbjct: 682 AQASLIRKETKELEALGKVEEERIKGKAETDVKYYIDNIKRLEREISELKLKSDYSRIIA 741
Query: 755 LRGSVDGGFMPDGKIENPAMKKGSKIPGLLMGGGSSSGSSLMGGLKRERECVVCLAEEKS 814
L+ G E+ A K+ S +G M +KRERECV+CL+EE S
Sbjct: 742 LK---------KGSSESKATKRES------LG---------MPKVKRERECVMCLSEEMS 777
Query: 815 VVFLPCAHQVLCQKCNELHEKQGMNDCPSCRSPIQQRIQVRFAQ 858
V+FLPCAHQVLC KCN+LHEK+GM DCPSCR I +RIQ RFA+
Sbjct: 778 VIFLPCAHQVLCFKCNQLHEKEGMMDCPSCRGTIHRRIQARFAR 821
>sp|Q8RX22|MIP1_ARATH MND1-interacting protein 1 OS=Arabidopsis thaliana GN=MIP1 PE=1
SV=1
Length = 711
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 203/376 (53%), Gaps = 25/376 (6%)
Query: 487 EYYAGIPFDETLGRYIPQNGKDELILKLVPWVPELQNELNSWTEWANQKVMQAARRLSKD 546
E + + D+ L + + KD +I+ L+ V + + ++ EWA + MQAA+++S++
Sbjct: 348 EKFRDLNLDDNL-ESVGVDDKDCVIVDLLHQVKDFEKKVKERKEWAQKNAMQAAQKVSEE 406
Query: 547 QAELKALRHEKQEVEQCQKDKQILEENTVKRLSEMEFALTNATAQVERSSSTVHTLEMEH 606
AELK L E++ ++ +K KQ +EE+T KR ++ E L A +Q +R++ V LE ++
Sbjct: 407 LAELKTLSSEREGIQLLKKGKQAVEESTAKRFTDKEIELRKACSQNDRANVIVRKLENQN 466
Query: 607 SVLKKEMEAANLRAAKSAVSCQEAFEREQKALKNAQSLEAQRVLLREELATEKQKVAVLQ 666
+ ++ E E + L A++S +C EA ++E+K LK + E Q + L++E+ EK+K+ L
Sbjct: 467 AEIRAEREGSKLSASESLKACMEASKKEKKCLKKLVAWEKQILKLQDEITAEKEKIKALY 526
Query: 667 QEISKAENRHNQLETRWREERMARENLLAQAAAIRNQREQLEAAAKAEEEMIKLEAEKEM 726
+ +++ ++E +WR+E+ A+E LAQ + +E E K + E ++L+ E +
Sbjct: 527 KTLAQITEYEKEIEAKWRQEQKAKEEALAQMEEEQRSKEAAEGHNKRKLETLRLKIELDF 586
Query: 727 SKLTEDIGKLESQLSLLKYKSDSSKIAALRGSVDGGFMPDGKIENPAMK----KGSKIPG 782
+ +D +LE +L LK SDS I N A K +G I
Sbjct: 587 QRHKDDHQRLEQELGRLKASSDSDS---------------SHISNNAWKPKKSQGENIAK 631
Query: 783 LLMGGGSSSGSSLMGGLKRERECVVCLAEEKSVVFLPCAHQVLCQKCNE--LHEKQGMND 840
LL G S +REC++C+ +E SVVFLPCAHQV+C C++ G +
Sbjct: 632 LLEEIDKLEG-SYDNEANYDRECIICMKDEVSVVFLPCAHQVVCGSCSDSFFASNNGGSK 690
Query: 841 --CPSCRSPIQQRIQV 854
CP CR +QQRI++
Sbjct: 691 VTCPCCRGLVQQRIRI 706
Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 9/165 (5%)
Query: 56 QNPLSYPPLSDAGSSRGTEVDKEAECESGEWDDPIVCALGELLSSGLNTLFRNVIKQISE 115
+N + +P L+D+GS V + E W L E+L L L+ + ++ E
Sbjct: 41 ENLVYHPGLTDSGSVNLNSVTENPE--ENFWAYCTEEHLEEILLKHLEFLYNQAVSKLLE 98
Query: 116 CGYSEDDATKNIARHSIYCGGKDLVSNIVNDTLSALEKVKGTNS------SRDEM-FDNL 168
GY E A K + + G D+++NIVN++LS L G R E F +L
Sbjct: 99 LGYEERVALKAVLSNGHCYGELDVLTNIVNNSLSYLNSGGGGGGSNGNGEDRTETGFTDL 158
Query: 169 QQMVDYTMLEMINVLRDVKTSLSIAEAMWWLLMCDLNISQACTVE 213
+ + +Y++ MI +L+ VK +LS +AMW LLM +L++ +A T++
Sbjct: 159 RDLEEYSLAGMIYLLQQVKPNLSKGDAMWCLLMSELHVGRASTLD 203
>sp|Q84ME1|LUL3_ARATH Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana
GN=LUL3 PE=1 SV=1
Length = 378
Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 787 GGSSSGSSLMGGLKRERECVVCLAEEKSVVFLPCAHQVLCQKCNELHEKQGMNDCPSCRS 846
G ++SG GG +ECV+CL E K +PC H LC C E Q N CP CR
Sbjct: 307 GTAASGLEDTGG----KECVICLTEPKDTAVMPCRHLCLCSDCAEELRFQ-TNKCPICRQ 361
Query: 847 PIQQRIQVR 855
PI + ++++
Sbjct: 362 PIHELVKIK 370
>sp|Q7ZUL9|MGRN1_DANRE Probable E3 ubiquitin-protein ligase MGRN1 OS=Danio rerio GN=mgrn1
PE=2 SV=1
Length = 529
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 804 ECVVCLAEEKSVVFLPCAHQVLCQKCNELHEKQGMNDCPSCRSPIQQRIQVR 855
ECVVCL++ + + LPC H LC C + Q N+CP CR P + +Q+R
Sbjct: 275 ECVVCLSDLRDTLILPCRHLCLCNACADTLRYQA-NNCPICRLPFRALLQIR 325
>sp|Q3TEL6|RN157_MOUSE RING finger protein 157 OS=Mus musculus GN=Rnf157 PE=2 SV=2
Length = 685
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 804 ECVVCLAEEKSVVFLPCAHQVLCQKCNELHEKQGMNDCPSCRSPIQQRIQVR 855
ECVVCL++ + + LPC H LC C + Q N+CP CR P + +Q+R
Sbjct: 276 ECVVCLSDVRDTLILPCRHLCLCNTCADTLRYQA-NNCPICRLPFRALLQIR 326
>sp|Q96PX1|RN157_HUMAN RING finger protein 157 OS=Homo sapiens GN=RNF157 PE=1 SV=3
Length = 679
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 804 ECVVCLAEEKSVVFLPCAHQVLCQKCNELHEKQGMNDCPSCRSPIQQRIQVR 855
ECVVCL++ + + LPC H LC C + Q N+CP CR P + +Q+R
Sbjct: 276 ECVVCLSDVRDTLILPCRHLCLCNTCADTLRYQA-NNCPICRLPFRALLQIR 326
>sp|Q13490|BIRC2_HUMAN Baculoviral IAP repeat-containing protein 2 OS=Homo sapiens
GN=BIRC2 PE=1 SV=2
Length = 618
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 8/66 (12%)
Query: 791 SGSSLMGGLKR---ERECVVCLAEEKSVVFLPCAHQVLCQKCNELHEKQGMNDCPSCRSP 847
SG SL L+R ER C VC+ +E SVVF+PC H V+CQ+C + CP CR
Sbjct: 554 SGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQEC-----APSLRKCPICRGI 608
Query: 848 IQQRIQ 853
I+ ++
Sbjct: 609 IKGTVR 614
>sp|Q62210|BIRC2_MOUSE Baculoviral IAP repeat-containing protein 2 OS=Mus musculus
GN=Birc2 PE=1 SV=1
Length = 612
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 791 SGSSLMGGLKR---ERECVVCLAEEKSVVFLPCAHQVLCQKCNELHEKQGMNDCPSCRSP 847
SG SL L+R ER C VC+ E S+VF+PC H V+CQ+C + CP CR
Sbjct: 548 SGLSLEEQLRRLQEERTCKVCMDREVSIVFIPCGHLVVCQEC-----APSLRKCPICRGT 602
Query: 848 IQQRIQ 853
I+ ++
Sbjct: 603 IKGTVR 608
>sp|Q9LFH6|LUL2_ARATH Probable E3 ubiquitin-protein ligase LUL2 OS=Arabidopsis thaliana
GN=LUL2 PE=2 SV=1
Length = 299
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 784 LMGGGSSSGSSLMGGLKRERECVVCLAEEKSVVFLPCAHQVLCQKCNELHEKQGMNDCPS 843
+ G G++ + +R +ECV+CL+E + LPC H +C C +L Q N CP
Sbjct: 222 IYGIGNTVDDNGEDANERGKECVICLSEPRDTTVLPCRHMCMCSGCAKLLRFQ-TNLCPI 280
Query: 844 CRSPIQQRIQV 854
CR P+ + +++
Sbjct: 281 CRQPVDRLLEI 291
>sp|Q9S752|LOFG2_ARATH Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana
GN=LOG2 PE=1 SV=1
Length = 388
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 803 RECVVCLAEEKSVVFLPCAHQVLCQKCNELHEKQGMNDCPSCRSPIQQRIQVR 855
+ECV+CL+E + LPC H +C C ++ Q N CP CR P+++ ++++
Sbjct: 317 KECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQ-TNRCPICRQPVERLLEIK 368
>sp|Q24306|IAP1_DROME Apoptosis 1 inhibitor OS=Drosophila melanogaster GN=th PE=1 SV=2
Length = 438
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 694 LAQAAAIRNQREQLEAAAKAEEEMIKLEAEKEMSKLTEDIGKLESQLSLLKYKSDSSKIA 753
L+Q ++ + QL A + + L EKE S + +Q S + ++ S
Sbjct: 287 LSQCRFVKLMKGQLYIDTVAAKPV--LAEEKEESSSIGGVAVASTQASEEEQQTSLSSEE 344
Query: 754 ALRGSVDGGFMPDGKIENPAMKKGSKIPGLLMGGGSSSGSSLMGGLKRERECVVCLAEEK 813
A+ G V P A + +KI S+ SS + E+ C +C E
Sbjct: 345 AVSGDVAPSVAPTA-----ATRIFNKIVEATAVATPSTNSSGSTSIPEEKLCKICYGAEY 399
Query: 814 SVVFLPCAHQVLCQKCNELHEKQGMNDCPSCRSPIQQRIQVRFA 857
+ FLPC H V C KC + CP CR P ++V F+
Sbjct: 400 NTAFLPCGHVVACAKC-----ASSVTKCPLCRKPFTDVMRVYFS 438
>sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2
Length = 943
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 799 LKRERECVVCLAEEKSVVFLPCAHQVLCQKCNELHEKQGMNDCPSCRSPIQQRIQV 854
LK + CV+C + ++V LPC H LC C + CP CRS I+ +I +
Sbjct: 891 LKDQNSCVICASNPPNIVLLPCRHSSLCSDC-----CSKLTKCPICRSHIENKISI 941
>sp|Q69Z36|MEX3B_MOUSE RNA-binding protein MEX3B OS=Mus musculus GN=Mex3b PE=2 SV=2
Length = 601
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 798 GLKRE--RECVVCLAEEKSVVFLPCAHQVLCQKC-NELHEKQGMNDCPSCRSPIQQRIQV 854
GL+R+ R+C VC E +PC H + C +C N + EK +CP C + + Q I++
Sbjct: 541 GLRRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKS-EPECPVCHTAVTQAIRI 599
>sp|Q3UU96|MRCKA_MOUSE Serine/threonine-protein kinase MRCK alpha OS=Mus musculus
GN=Cdc42bpa PE=1 SV=2
Length = 1719
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 42/231 (18%)
Query: 544 SKDQAELKALRHE-----KQEVEQCQKDKQILEENTVKRLSEMEFALTNATAQVERSSST 598
SKD E+K+L+ E KQ E ++Q+ E N+V+R L +A Q++ S
Sbjct: 484 SKD-LEIKSLKEEIEKLRKQVAEVNHLEQQLEEANSVRR------ELDDAFRQIKASEKQ 536
Query: 599 VHTLEMEHSVLKKEMEAANLRAAKSAVSCQEAFEREQKALKNAQSLEAQRVLLREELATE 658
+ TL+ E L KE+ A+ R + ++A Q+ L + +E L EL T+
Sbjct: 537 IKTLQQEREELNKELVQASERLKNQSKELKDA--HCQRKLAMQEFMEINERLT--ELHTQ 592
Query: 659 KQKVA------------------VLQQEISKAENRHNQLETRWREERMARENLLAQAAAI 700
KQK+A L+QE+ +AE +LE E L+A+A+
Sbjct: 593 KQKLARHVRDKEEEVDLVMQKAESLRQELRRAERAKKELEVH-------TEALIAEASKD 645
Query: 701 RNQREQLEAAAKAEEEMIKLEAEKEMSKLTEDIGKLESQLSLLKYKSDSSK 751
+ REQ E +K E ++ +K++S + I +E Q + K K+D K
Sbjct: 646 KKLREQSEHYSKQLENELEGLKQKQIS-YSPGICSIEHQQEITKLKTDLEK 695
>sp|Q6ZN04|MEX3B_HUMAN RNA-binding protein MEX3B OS=Homo sapiens GN=MEX3B PE=1 SV=1
Length = 569
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 800 KRERECVVCLAEEKSVVFLPCAHQVLCQKC-NELHEKQGMNDCPSCRSPIQQRIQV 854
K R+C VC E +PC H + C +C N + EK +CP C + + Q I++
Sbjct: 513 KGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKS-EPECPVCHTAVTQAIRI 567
>sp|O54874|MRCKA_RAT Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus
GN=Cdc42bpa PE=1 SV=1
Length = 1732
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 42/231 (18%)
Query: 544 SKDQAELKALRHE-----KQEVEQCQKDKQILEENTVKRLSEMEFALTNATAQVERSSST 598
SKD E+K+L+ E KQ E ++Q+ E N+V+R L +A Q++
Sbjct: 484 SKD-LEIKSLKEEIEKLRKQVAEVNHLEQQLEEANSVRR------ELDDAFRQIKAFEKQ 536
Query: 599 VHTLEMEHSVLKKEMEAANLRAAKSAVSCQEAFEREQKALKNAQSLEAQRVLLREELATE 658
+ TL+ E L KE+ A+ R + ++A Q+ L + +E L EL T+
Sbjct: 537 IKTLQQEREELNKELVQASERLKNQSKELKDA--HCQRKLAMQEFMEINERLT--ELHTQ 592
Query: 659 KQKVA------------------VLQQEISKAENRHNQLETRWREERMARENLLAQAAAI 700
KQK+A L+QE+ +AE +LE E L+A+A+
Sbjct: 593 KQKLARHVRDKEEEVDLVMQKAESLRQELRRAERAKKELEVH-------TEALIAEASKD 645
Query: 701 RNQREQLEAAAKAEEEMIKLEAEKEMSKLTEDIGKLESQLSLLKYKSDSSK 751
R REQ +K E ++ +K++S + I +E Q + K K+D K
Sbjct: 646 RKLREQSRHYSKQLENELEGLKQKQIS-YSPGICSIEHQQEITKLKTDLEK 695
>sp|Q5VT25|MRCKA_HUMAN Serine/threonine-protein kinase MRCK alpha OS=Homo sapiens
GN=CDC42BPA PE=1 SV=1
Length = 1732
Score = 39.7 bits (91), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 34/227 (14%)
Query: 544 SKDQAELKALRHE-----KQEVEQCQKDKQILEENTVKRLSEMEFALTNATAQVERSSST 598
SKD E+K L+ E KQ E ++Q+ E N V++ L +A Q++
Sbjct: 484 SKD-LEIKNLKEEIEKLRKQVTESSHLEQQLEEANAVRQ------ELDDAFRQIKAYEKQ 536
Query: 599 VHTLEMEHSVLKKEMEAANLRAAKSAVSCQEAFEREQKALKNAQSLEAQRVLLR------ 652
+ TL+ E L KE+ A+ R + ++A + + A++ + + L
Sbjct: 537 IKTLQQEREDLNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKL 596
Query: 653 --------EELATEKQKVAVLQQEISKAENRHNQLETRWREERMARENLLAQAAAIRNQR 704
EE+ QKV L+QE+ + E +LE E L A+A+ R R
Sbjct: 597 ARHVRDKEEEVDLVMQKVESLRQELRRTERAKKELEVH-------TEALAAEASKDRKLR 649
Query: 705 EQLEAAAKAEEEMIKLEAEKEMSKLTEDIGKLESQLSLLKYKSDSSK 751
EQ E +K E ++ +K++S + + +E Q + K K+D K
Sbjct: 650 EQSEHYSKQLENELEGLKQKQIS-YSPGVCSIEHQQEITKLKTDLEK 695
>sp|Q9ULV0|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3
Length = 1848
Score = 37.7 bits (86), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 39/226 (17%)
Query: 536 VMQAARRLSKDQAELKALRHEKQEVEQCQKDKQILEENTV---KRLSEMEFALTNATAQV 592
V+Q A R+ K + ELKALR E + E ++ +E V +++ E + Q+
Sbjct: 889 VIQCAFRMLKARRELKALRIEARSAEHLKRLNVGMENKVVQLQRKIDEQNKEFKTLSEQL 948
Query: 593 ERSSSTVHTLEMEHSVLKKEM--------EAANLRAAKSAVSCQEAFER---EQKALKNA 641
++ST +T+E+E LKKE+ E +LR + S + +R E+K L++A
Sbjct: 949 SVTTST-YTMEVER--LKKELVHYQQSPGEDTSLRLQEEVESLRTELQRAHSERKILEDA 1005
Query: 642 QSLEAQRVLLREELATEKQKVAVLQQEISKAENRHNQLETRWREE---RMARENLLAQAA 698
S E LR+ +A +Q+ A+L+ E E +NQ+ + ++E +ENL+
Sbjct: 1006 HSREKDE--LRKRVADLEQENALLKDE---KEQLNNQILCQSKDEFAQNSVKENLM---- 1056
Query: 699 AIRNQREQLEAAAKAEEEMIKLEAEKEMSKLTEDIGKLESQLSLLK 744
+++LE + ++ KE S+L + L +++++K
Sbjct: 1057 -----KKELEEERSRYQNLV-----KEYSQLEQRYDNLRDEMTIIK 1092
>sp|Q8VD75|HIP1_MOUSE Huntingtin-interacting protein 1 OS=Mus musculus GN=Hip1 PE=1 SV=2
Length = 1029
Score = 37.7 bits (86), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 45/265 (16%)
Query: 494 FDETLG--------RYIPQNG-----KDELILKLVPWVPELQNELNSWTEWANQKVMQAA 540
FD+ G + QNG KD LI +L + L +L++ + + ++Q
Sbjct: 347 FDDVFGSSLSSDPFNFNNQNGVNKDEKDHLIERLYREISGLTGQLDNMKIESQRAMLQLK 406
Query: 541 RRLSKDQAELKALRH-EKQEVEQCQKDKQILEENTVKR---------LSEMEFALTNATA 590
R+S+ +AEL +H +Q ++ C+ + L+E +R L+E+E
Sbjct: 407 GRVSELEAELAEQQHLGRQAMDDCEFLRTELDELKRQREDTEKAQRSLTEIERKAQANEQ 466
Query: 591 QVERSSSTVHTLEMEHS-VLKKEMEAANLRAAKSAVSCQEAFEREQKALKN--AQSLEAQ 647
+ + L H+ +L+K E + A Q ERE+K L + A++ E Q
Sbjct: 467 RYSKLKEKYSELVQNHADLLRKNAEVT--KQVSVARQAQVDLEREKKELADSFARTQEQQ 524
Query: 648 RVL--LREELATEKQKVAVLQQEISKAENRHNQLETRWREERMARENLLAQAAAIRNQRE 705
VL L+ ELAT +Q++ VL H+ LET + E L Q A + ++
Sbjct: 525 DVLENLKHELATSRQELQVL----------HSNLETSAQSE----AKWLTQIAELEKEQG 570
Query: 706 QL-EAAAKAEEEMIKLEAEKEMSKL 729
L AA+ EEE+ L + E +++
Sbjct: 571 SLATVAAQREEELSALRDQLESTQI 595
>sp|P05659|MYSN_ACACA Myosin-2 heavy chain, non muscle OS=Acanthamoeba castellanii PE=3
SV=1
Length = 1509
Score = 36.6 bits (83), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 9/202 (4%)
Query: 521 LQNELNSWTE---WANQKVMQAARRLSKDQAELKALRHEKQEVEQCQKDKQILEENTVKR 577
LQ + +W E WA ++ AR L + K + K++V+ +K+ L++ K
Sbjct: 823 LQRNIRAWLELKNWAWYQLYVKARPLISQRNFQKEIDDLKKQVKDLEKELAALKDANAKL 882
Query: 578 LSEMEFALTNATAQVERSSSTVHTLEMEHSVLKKEMEAANLRAAKSAVSCQEAFEREQKA 637
E + A +A ++E+ + + ++ K ++E N K +E + E A
Sbjct: 883 DKEKQLAEEDAD-KLEKDLAALKLKILDLEGEKADLEEDNALLQKKVAGLEEELQEETSA 941
Query: 638 ----LKNAQSLEAQRVLLREELATEKQKVAVLQQEISKAENRHNQLETRWREERMARENL 693
L+ + LEA++ L+ L E++ LQ+ +K E+ N+L+ ++ +E A ++L
Sbjct: 942 SNDILEQKRKLEAEKGELKASLEEEERNRKALQEAKTKVESERNELQDKYEDEAAAHDSL 1001
Query: 694 LAQAAAI-RNQREQLEAAAKAE 714
+ + R RE +A A AE
Sbjct: 1002 KKKEEDLSRELRETKDALADAE 1023
>sp|O45420|PLHD1_CAEEL Pleckstrin homology domain-containing family D member 1
OS=Caenorhabditis elegans GN=F31D4.5 PE=3 SV=2
Length = 570
Score = 36.2 bits (82), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 24/216 (11%)
Query: 547 QAELKALRHEKQEVEQCQKDKQILE---ENTVKRLSEMEFALTNATAQVERSSSTVHTLE 603
+AE KA + E ++ KDK+ LE E ++ +++ L N +++ ++ TLE
Sbjct: 227 EAEAKARKEEHDRADELAKDKEELEAEREKLIRTTKKLKDDLQNVKNELKMTNEMKKTLE 286
Query: 604 MEH-------SVLKKEMEAANLRAAKSAVSCQEAFEREQKALKNAQSLEAQRVLL----- 651
E L+ ME+ N+ K QE +K L + Q+L + L
Sbjct: 287 QEKMSLNSKTEHLQANMESLNIEKEKIHEQLQEIVREREKVLIDNQNLSTDKCQLNNRLM 346
Query: 652 -----REELATEKQKVAVLQQEISKAENRHNQLETRWREERMARENLLAQAAAIRNQREQ 706
R + TEK+K+ L + E + LE + M L+ + QR+
Sbjct: 347 EIETSRNCIMTEKEKIENL---LKMNEQKTQDLEKERQYYTMKTSELMDHLKEVSEQRDL 403
Query: 707 LEAAAKAEEEMIKLEAEKEMSKLTEDIGKLESQLSL 742
E+ K E+ M +L AEK++ + + LE L +
Sbjct: 404 TESELK-EQMMARLGAEKQLQAAEKALEHLEMALKM 438
>sp|P15924|DESP_HUMAN Desmoplakin OS=Homo sapiens GN=DSP PE=1 SV=3
Length = 2871
Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 89/186 (47%), Gaps = 14/186 (7%)
Query: 534 QKVMQAARRLSKDQAELKALRHEKQEVEQCQKDKQILEENTVKRLSEMEFALTNATAQVE 593
Q+ + RRLS +E++ALR + + ++ K + E+ K + + +L + ++E
Sbjct: 1648 QRTQEELRRLS---SEVEALRRQLLQEQESVKQAHLRNEHFQKAIEDKSRSLNESKIEIE 1704
Query: 594 RSSSTVHTLEMEHSVLKKE-----MEAANLRAAKSAVSCQEAFE----REQKALKNAQSL 644
R S L EH +L++E +E +LR +S + R Q + N ++L
Sbjct: 1705 RLQSLTENLTKEHLMLEEELRNLRLEYDDLRRGRSEADSDKNATILELRSQLQISNNRTL 1764
Query: 645 EAQRVL--LREELATEKQKVAVLQQEISKAENRHNQLETRWREERMARENLLAQAAAIRN 702
E Q ++ L+ E +Q++ Q++ +A NR + + + + RE+LL + +
Sbjct: 1765 ELQGLINDLQRERENLRQEIEKFQKQALEASNRIQESKNQCTQVVQERESLLVKIKVLEQ 1824
Query: 703 QREQLE 708
+ +L+
Sbjct: 1825 DKARLQ 1830
>sp|E9Q557|DESP_MOUSE Desmoplakin OS=Mus musculus GN=Dsp PE=3 SV=1
Length = 2883
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 107/228 (46%), Gaps = 23/228 (10%)
Query: 534 QKVMQAARRLSKDQAELKALRHEKQEVEQCQKDKQILEENTVKRLSEMEFALTNATAQVE 593
Q+ + RRLS D ++ALR + + ++ K + E+ K + + +L + ++E
Sbjct: 1660 QRTQEELRRLSLD---VEALRRQLVQEQENVKQAHLRNEHFQKAIEDKSRSLNESKIEIE 1716
Query: 594 RSSSTVHTLEMEHSVLKKE-----MEAANLRAAKSAVSCQE----AFEREQKALKNAQSL 644
R S L EH +L++E +E +LR +S + + R Q + N ++L
Sbjct: 1717 RLQSLTENLTKEHLMLEEELRNLRLEYDDLRRGRSEADSDKNSTISELRSQLQISNNRTL 1776
Query: 645 EAQRVL--LREELATEKQKVAVLQQEISKAENRHNQLETRWREERMARENLLAQAAAIRN 702
E Q ++ L+ E +Q++ Q++ +A NR + +++ + RE+LL + +
Sbjct: 1777 ELQGLINDLQRERENLRQEIEKFQKQALEASNRIQESKSQCTQVVQERESLLVKIKVLEQ 1836
Query: 703 QREQLE--------AAAKAE-EEMIKLEAEKEMSKLTEDIGKLESQLS 741
+ +L+ A A E E +K E E ++ D+ + ++Q S
Sbjct: 1837 DKARLQRLEDELNRAKATLEAESRVKQRLECEKQQIQNDLNQWKTQYS 1884
>sp|P70336|ROCK2_MOUSE Rho-associated protein kinase 2 OS=Mus musculus GN=Rock2 PE=1 SV=1
Length = 1388
Score = 35.8 bits (81), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Query: 623 SAVSCQEAFEREQKALKNAQSLEAQRVLLREELATEKQKVAV-LQQEISKAENRHNQLET 681
SA + + FE K L N ++L+ Q V E+ K+ V ++ + E + +L
Sbjct: 1012 SAAAIKAQFE---KQLLNERTLKTQAVNKLAEIMNRKEPVKRGSDTDVRRKEKENRKLHM 1068
Query: 682 RWREERMARENLLAQAAAIRNQREQLEAAAK-AEEEMIKLEAEKEMSKLTEDIGKLESQL 740
+ ER E L Q I+ Q+E E A+ AEE I++E + + DI +L SQL
Sbjct: 1069 ELKSER---EKLTQQM--IKYQKELNEMQAQIAEESQIRIELQMTLDSKDSDIEQLRSQL 1123
Query: 741 SLLKYKSDSSKIAALRGSV--DGGFMPDGKIE 770
L DSS I + G D GF P+ ++E
Sbjct: 1124 QALHIGMDSSSIGSGPGDAEPDDGF-PESRLE 1154
>sp|Q6CWM4|BRE1_KLULA E3 ubiquitin-protein ligase BRE1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=BRE1 PE=3 SV=1
Length = 663
Score = 35.4 bits (80), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 13/96 (13%)
Query: 764 MPDGKIENPAMK--------KGSKIPGLLMGGGSSSGSSLMGGLKRERE---CVVCLAEE 812
+ D IEN +K K K+ L+ G +G+ L L+ R C +C
Sbjct: 560 IKDKDIENKQLKIKVSSAEAKSKKLYKTLLSNGGDNGA-LAEELENFRTIIYCSLCSKNW 618
Query: 813 KSVVFLPCAHQVLCQKCNELHEKQGMNDCPSCRSPI 848
K+ C H V C C + M CP+C P
Sbjct: 619 KNTALKTCGH-VFCDVCCKERLAARMRKCPTCNKPF 653
>sp|P28023|DCTN1_RAT Dynactin subunit 1 OS=Rattus norvegicus GN=Dctn1 PE=2 SV=2
Length = 1280
Score = 35.0 bits (79), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 56/239 (23%)
Query: 544 SKDQAELKALRHEKQEVEQCQKDKQILEENTV---KRLSE-------------------- 580
S+D+A+LK L K ++EQ Q+ K ++E +RL E
Sbjct: 239 SEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEAKEAKEALEAKERYMEEMAD 298
Query: 581 ----MEFALTNATAQVERSSST----------VHTLEMEHSVLKKEMEAANLRAAKSAVS 626
+E A + ER+ S V L + +LK E+E A S+
Sbjct: 299 TADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQ 358
Query: 627 CQEAFEREQKALKNAQSLEAQRVLLREELATEKQKVAVLQQEISKAENRHNQLE-TRWRE 685
++ E + LK+A V +R+ ++EKQ+ LQ+ + E ++ +LE R +
Sbjct: 359 LKQ-LEEQNARLKDA------LVRMRDLSSSEKQEHVKLQKLM---EKKNQELEVVRQQR 408
Query: 686 ERMARENLLAQA-AAIRNQREQLEAAAKAEE--EMI---KLEAEKEMSKLTEDIGKLES 738
ER+ E L+QA + I +EQ++AA AEE EM+ L E+++ +L E +G LE+
Sbjct: 409 ERLQEE--LSQAESTIDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVGDLEA 465
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 35.0 bits (79), Expect = 2.9, Method: Composition-based stats.
Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 47/195 (24%)
Query: 538 QAARRLSKDQAELKALRHEKQEVEQCQKDKQILEENTVKRLSEMEFALTNATAQVERSSS 597
Q RL K++ ELK R E++ +E+ +K +Q+ +E +KR + A + E+
Sbjct: 2742 QEQERLQKEE-ELK--RQEQERLER-EKQEQLQKEEELKRQEQERLQKEEALKRQEQER- 2796
Query: 598 TVHTLEMEHSVLKKEMEAANLRAAKSAVSCQEAFEREQKALKNAQSLEAQRVLLREELAT 657
L+ E + ++E QE ERE++ + L+ + L R+E
Sbjct: 2797 ----LQKEEELKRQE---------------QERLEREKQ-----EQLQKEEELKRQEQER 2832
Query: 658 EKQKVAVLQQEISKAENRHNQLETRWREERMARENLLAQAAAIRNQREQLEAAAKAEEEM 717
+++ A+ +QE + + +EE + R+ R +R+++E A + E+
Sbjct: 2833 LQKEEALKRQEQERLQ----------KEEELKRQE------QERLERKKIELAER--EQH 2874
Query: 718 IKLEAEKEMSKLTED 732
IK + E +M K+ +D
Sbjct: 2875 IKSKLESDMVKIIKD 2889
>sp|P35458|DCTN1_CHICK Dynactin subunit 1 OS=Gallus gallus GN=DCTN1 PE=2 SV=2
Length = 1224
Score = 34.7 bits (78), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 151/370 (40%), Gaps = 83/370 (22%)
Query: 417 AAAASRDRGHCASTRTPLAHPVSDSPSSLPTKGTTLALPVPNTELVASSSSKKNPDIKA- 475
AA S+ RG T + +P+S P+ GT A P + S P A
Sbjct: 125 AAKGSKLRGAKPKKTTARRPKPTRTPTSAPSSGT--AGPSGSASASGGEMSSSEPSTPAQ 182
Query: 476 ---VATTSPSPKLPEYYAGIPFDETLGRYIPQNGKDELILKLVPWVPELQNELNSWTEWA 532
VA PSP L A + +P K+E L+ V +L+ +L +
Sbjct: 183 TPLVAPVIPSPSLTSPVAPM---------VPSPTKEEENLR--SQVRDLEEKLETLKIKR 231
Query: 533 NQKVMQAARRLSKDQAELKALRHEKQEVEQCQKDKQILEENTV---KRLSE--------- 580
N+ D+A+LK L K ++EQ Q+ K ++E +RL E
Sbjct: 232 NE-----------DKAKLKELEKYKIQLEQVQEWKSKMQEQQADLQRRLKEAKKEAKDAL 280
Query: 581 ----------------MEFALTNATAQVERSSS----------TVHTLEMEHSVLKKEME 614
+E A + ER+ S V L M+ +LK E+E
Sbjct: 281 EAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVDSLKEKVEYLTMDLEILKHEIE 340
Query: 615 AANLRAAKSAVSCQEAFEREQKALKNAQSLEAQRVLLREELATEKQKVAVLQQEISKAEN 674
A S+ ++ E + LK A V +R+ A+EKQ+ LQ+++ E
Sbjct: 341 EKGSDGAASSYQVKQ-LEEQNARLKEA------LVRMRDLSASEKQEHVKLQKQM---EK 390
Query: 675 RHNQLETRWREERMARENLLAQAAAIRNQREQLEAAAKAEEEMIK------LEAEKEMSK 728
++ +LE+ ++ +E + + +EQ++AA A EEM++ L+ E+++ +
Sbjct: 391 KNTELESLRQQREKLQEEVKQAEKTVDELKEQVDAALGA-EEMVETLTERNLDLEEKVRE 449
Query: 729 LTEDIGKLES 738
L E +G LE+
Sbjct: 450 LRETVGDLEA 459
>sp|O08788|DCTN1_MOUSE Dynactin subunit 1 OS=Mus musculus GN=Dctn1 PE=1 SV=3
Length = 1281
Score = 34.7 bits (78), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 57/240 (23%)
Query: 544 SKDQAELKALRHEKQEVEQCQKDKQILEENTV---KRLSE-------------------- 580
S+D+A+LK L K ++EQ Q+ K ++E +RL E
Sbjct: 239 SEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMA 298
Query: 581 -----MEFALTNATAQVERSSST----------VHTLEMEHSVLKKEMEAANLRAAKSAV 625
+E A + ER+ S V L + +LK E+E A S+
Sbjct: 299 DTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSY 358
Query: 626 SCQEAFEREQKALKNAQSLEAQRVLLREELATEKQKVAVLQQEISKAENRHNQLE-TRWR 684
++ E + LK+A V +R+ ++EKQ+ LQ+ + E ++ +LE R +
Sbjct: 359 QLKQ-LEEQNARLKDA------LVRMRDLSSSEKQEHVKLQKLM---EKKNQELEVVRQQ 408
Query: 685 EERMARENLLAQA-AAIRNQREQLEAAAKAEE--EMI---KLEAEKEMSKLTEDIGKLES 738
ER+ E L+QA + I +EQ++AA AEE EM+ L E+++ +L E +G LE+
Sbjct: 409 RERLQEE--LSQAESTIDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVGDLEA 466
>sp|Q2PQA9|KINH_RAT Kinesin-1 heavy chain OS=Rattus norvegicus GN=Kif5b PE=1 SV=1
Length = 963
Score = 34.3 bits (77), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 475 AVATTSPSPKLPEYYAGIPFDETLGRYIPQNGKDEL--ILKLVPWVPELQNELNSWTEWA 532
+A + K PE I + T+ R K E+ ++K + Q E N E
Sbjct: 566 GIAVGNNDVKQPEGTGMIDEEFTVARLYISKMKSEVKTMVKRCKQLESTQTESNKKMEEN 625
Query: 533 NQKVMQAARRLSKDQAELKALRHEKQEVEQCQKDKQILEENTVKRLSEMEFALTNATAQV 592
+++ R+S+ +A++K+L Q VE QK +Q+ E +V L E L
Sbjct: 626 EKELAACQLRISQHEAKIKSLTEYLQNVE--QKKRQL--EESVDSLGEELVQL------- 674
Query: 593 ERSSSTVHTLEMEH-----------SVLKKEMEAANLRAAKSAVSCQEAFEREQKALKNA 641
R+ VH +E EH +++++++ K S ++ E ++K + +
Sbjct: 675 -RAQEKVHEMEKEHLNKVQTANEVKQAVEQQIQSHRETHQKQISSLRDEVEAKEKLITDL 733
Query: 642 QSLEAQRVLLREELATEKQKVAVLQQEISK 671
Q + VL +E L E +++ + QE S+
Sbjct: 734 QDQNQKMVLEQERLRVEHERLKAVDQEKSR 763
>sp|Q62868|ROCK2_RAT Rho-associated protein kinase 2 OS=Rattus norvegicus GN=Rock2 PE=1
SV=2
Length = 1388
Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 673 ENRHNQLETRWREERMARENLLAQAAAIRNQREQLEAAAK-AEEEMIKLEAEKEMSKLTE 731
ENR +E + E++ ++ I+ Q+E E A+ AEE I++E + +
Sbjct: 1062 ENRKLHMELKSEREKLTQQ-------MIKYQKELNEMQAQIAEESQIRIELQMTLDSKDS 1114
Query: 732 DIGKLESQLSLLKYKSDSSKIAALRGSV--DGGFMPDGKIE 770
DI +L SQL L DSS I + G D GF P+ ++E
Sbjct: 1115 DIEQLRSQLQALHIGMDSSSIGSGPGDAEPDDGF-PESRLE 1154
>sp|Q28021|ROCK2_BOVIN Rho-associated protein kinase 2 OS=Bos taurus GN=ROCK2 PE=1 SV=1
Length = 1388
Score = 33.9 bits (76), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 673 ENRHNQLETRWREERMARENLLAQAAAIRNQREQLEAAAK-AEEEMIKLEAEKEMSKLTE 731
ENR +E + E++ ++ I+ Q+E E A+ AEE I++E + +
Sbjct: 1062 ENRKLHMELKSEREKLTQQ-------MIKYQKELNEMQAQIAEESQIRIELQMTLDSKDS 1114
Query: 732 DIGKLESQLSLLKYKSDSSKIAALRGSV--DGGFMPDGKIE 770
DI +L SQL L DSS I + G D GF P+ ++E
Sbjct: 1115 DIEQLRSQLQALHIGLDSSSIGSGPGDTEADDGF-PESRLE 1154
>sp|Q9Y5S2|MRCKB_HUMAN Serine/threonine-protein kinase MRCK beta OS=Homo sapiens
GN=CDC42BPB PE=1 SV=2
Length = 1711
Score = 33.9 bits (76), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 53/248 (21%)
Query: 534 QKVMQAARRLSKDQAELKALRHEKQEVEQCQKDKQILEENT-VKRL-------SEMEFAL 585
Q+ ++ +R+L + +++L + + +DK+I + N ++RL + +E L
Sbjct: 452 QEKLELSRKLQESTQTVQSLHGSSRALSNSNRDKEIKKLNEEIERLKNKIADSNRLERQL 511
Query: 586 TNATA-QVERSSST--VHTLEMEHSVLKKEMEA-------ANLRAAKSAVSCQEAFEREQ 635
+ A + ER ST + LE +H V+++E E A+ R A ++A ++ +
Sbjct: 512 EDTVALRQEREDSTQRLRGLEKQHRVVRQEKEELHKQLVEASERLKSQAKELKDAHQQRK 571
Query: 636 KALKNAQSLEAQRVLLR--------------EELATEKQKVAVLQQEISKAENRHNQLET 681
AL+ L + LR EE+ QKV ++QE+ +AE +LE
Sbjct: 572 LALQEFSELNERMAELRAQKQKVSRQLRDKEEEMEVATQKVDAMRQEMRRAEKLRKELEA 631
Query: 682 RWREERMARENLLAQAAAIRNQREQLEAAAK---AEEEMIK-----------LEAEKEMS 727
+ ++ +A+A+ R RE E K +E E +K LE ++E+S
Sbjct: 632 QL-------DDAVAEASKERKLREHSENFCKQMESELEALKVKQGGRGAGATLEHQQEIS 684
Query: 728 KLTEDIGK 735
K+ ++ K
Sbjct: 685 KIKSELEK 692
>sp|O75116|ROCK2_HUMAN Rho-associated protein kinase 2 OS=Homo sapiens GN=ROCK2 PE=1 SV=4
Length = 1388
Score = 33.9 bits (76), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 673 ENRHNQLETRWREERMARENLLAQAAAIRNQREQLEAAAK-AEEEMIKLEAEKEMSKLTE 731
ENR +E + E++ ++ I+ Q+E E A+ AEE I++E + +
Sbjct: 1062 ENRKLHMELKSEREKLTQQ-------MIKYQKELNEMQAQIAEESQIRIELQMTLDSKDS 1114
Query: 732 DIGKLESQLSLLKYKSDSSKIAALRGS--VDGGFMPDGKIE 770
DI +L SQL L DSS I + G D GF P+ ++E
Sbjct: 1115 DIEQLRSQLQALHIGLDSSSIGSGPGDAEADDGF-PESRLE 1154
>sp|Q14203|DCTN1_HUMAN Dynactin subunit 1 OS=Homo sapiens GN=DCTN1 PE=1 SV=3
Length = 1278
Score = 33.5 bits (75), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 110/240 (45%), Gaps = 57/240 (23%)
Query: 544 SKDQAELKALRHEKQEVEQCQKDKQILEENTV---KRLSE-------------------- 580
++D+A+LK L K ++EQ Q+ K ++E +RL E
Sbjct: 239 AEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMA 298
Query: 581 -----MEFALTNATAQVERSSST----------VHTLEMEHSVLKKEMEAANLRAAKSAV 625
+E A + ER+ S V L + +LK E+E A S+
Sbjct: 299 DTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSY 358
Query: 626 SCQEAFEREQKALKNAQSLEAQRVLLREELATEKQKVAVLQQEISKAENRHNQLE-TRWR 684
++ E + LK+A V +R+ ++EKQ+ LQ+ + E ++ +LE R +
Sbjct: 359 QLKQ-LEEQNARLKDA------LVRMRDLSSSEKQEHVKLQKLM---EKKNQELEVVRQQ 408
Query: 685 EERMARENLLAQA-AAIRNQREQLEAAAKAEE--EMI---KLEAEKEMSKLTEDIGKLES 738
ER+ E L+QA + I +EQ++AA AEE EM+ L E+++ +L E +G LE+
Sbjct: 409 RERLQEE--LSQAESTIDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVGDLEA 466
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.125 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 304,765,117
Number of Sequences: 539616
Number of extensions: 13169221
Number of successful extensions: 59502
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 2520
Number of HSP's that attempted gapping in prelim test: 49321
Number of HSP's gapped (non-prelim): 8806
length of query: 859
length of database: 191,569,459
effective HSP length: 126
effective length of query: 733
effective length of database: 123,577,843
effective search space: 90582558919
effective search space used: 90582558919
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)