Your job contains 1 sequence.
>002999
MDLARALGIESDNHNELTEQIKQLKSDLSQSSSVSERRILTSLQRILDTWSVVPDVAALN
WDSELEEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCP
VTGQVLKSLELKPNIGLAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKALDIVFKI
SEEHPSNRYRVRNAGVVLLIVKLLKSSSKSVGTILRSKALMALLSMAKDEESKKIMLEEG
VTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAYCKSVASEKGALVLLSSMTGNLELPALS
NLADEVFKKMERIEEIVQPLAAAGRFEPLINRLCQGSDNVQIEMAFLVGKLTLTNSCKEH
IARQCAKVLVELLSKPAGRAASLKALYNLSGLDDNATILVDSALLPALTDILFKSHDASP
ELKELAAATIANVVSNPGCWELASADKLGHSMQSESIVSSLLGLLSGVSPQCQVSTLRIL
CGIASSPQAAESVATHIKSGDGIKYIIQFLEHPEVEHRTYAFRLTRILSERIGQDLAYAL
KPFDKLVLFKDKILDNQSANCERSDAACILANIQLSEEEVKTLLEATFIKWIVITLQTHK
SSFNTRSSRPISNIAEGLLGLLLHFTRSVNPQTLGMVREQRLMTIFRDQLSFPSKARVKQ
LAAHGLKNLSEAGRSLCAEDTGSPTPRRFCASLVFICGKPPPEPTTCPIHNTPCEDDSQL
CLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFKRGVDELEREGALDAVVDL
FTEVRPGLLQERTVWMLERVLRVEGHSHRYSLNQSLVRALVEAFKHGNANAKRHAQEALT
NLKQISGLSGKASQPRARR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002999
(859 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 848 1.0e-84 1
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 843 3.4e-84 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 143 3.9e-15 2
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 222 1.2e-14 1
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 148 2.1e-11 2
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 126 2.5e-10 2
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 136 3.5e-10 2
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 169 9.1e-10 2
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 167 1.5e-09 2
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 129 1.5e-09 2
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 148 2.8e-09 2
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 172 3.5e-09 1
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 153 3.9e-09 2
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 144 4.5e-09 2
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 139 5.3e-09 2
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 141 7.0e-09 2
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 151 7.3e-09 2
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 165 1.7e-08 1
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 141 2.3e-08 2
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 133 4.7e-08 2
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 147 1.0e-07 2
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 150 1.1e-07 2
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 155 3.1e-07 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 115 3.8e-07 3
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 144 4.0e-07 2
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 152 4.8e-07 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 124 5.7e-07 2
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 140 2.6e-06 2
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 124 4.1e-06 3
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 132 4.5e-06 2
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 140 5.8e-06 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 140 5.8e-06 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 112 6.2e-06 3
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 121 6.4e-06 2
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 133 1.0e-05 2
TAIR|locus:2195351 - symbol:IMPA-4 "AT1G09270" species:37... 118 1.1e-05 2
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 137 1.2e-05 1
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 137 1.2e-05 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 137 1.2e-05 1
TAIR|locus:2083313 - symbol:IMPA-1 "importin alpha isofor... 108 1.5e-05 3
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 135 1.7e-05 1
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 123 2.1e-05 2
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 133 3.3e-05 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 133 7.1e-05 1
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 107 7.1e-05 2
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 131 8.4e-05 1
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 129 9.0e-05 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 130 9.3e-05 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 129 9.5e-05 1
TAIR|locus:2132238 - symbol:MOS6 "MODIFIER OF SNC1, 6" sp... 129 0.00011 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 130 0.00015 1
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 126 0.00015 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 127 0.00015 1
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 128 0.00024 1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 88 0.00072 2
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 123 0.00084 1
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 123 0.00089 1
TAIR|locus:505006475 - symbol:IMPA-2 "importin alpha isof... 119 0.00094 2
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
Identities = 246/794 (30%), Positives = 402/794 (50%)
Query: 70 HILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSL 129
HI ++ F+CPLTK+VM +PV LE+ + +ER+AIE WF+ C + GR P+CP+T Q L S
Sbjct: 22 HI--YEAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTST 79
Query: 130 ELKPNIGLAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKALDIVFKISEEHPSNRY 189
++ +I L IEEW +RN ++ ++L N E D L +AL V +I SNR+
Sbjct: 80 DVSASIALRNTIEEWRSRNDAAKLDIARQSLFLGNAETDIL-QALMHVRQICRTIRSNRH 138
Query: 190 RVRNAGXXXXXXXXXXXXXXXXGTILRSKALMALLSMAK-DEESKKIMLEEGVTKSVIHS 248
VRN+ +R KAL L + + D+ESK I+ E ++++
Sbjct: 139 GVRNSQLIHMIIDMLKSTSHR----VRYKALQTLQVVVEGDDESKAIVAEGDTVRTLVKF 194
Query: 249 LIGNSEKEKEYAVKLLLEFCIDEAYCKSVASEKGALVLLSSMTG-NLELPALSNLADEVF 307
L K +E AV LL E EA C+ + S GAL+LL +T N E ++ AD
Sbjct: 195 LSHEPSKGREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSENVSIVEKADRTL 254
Query: 308 KKMERIEEIVQPLAAAGRFEPLINRLCQGSDNVQIEMAFLVGKLTLTNSCKEHIARQCAK 367
+ MER EEIV+ +A+ GR +PL+ +L +GS ++ MA +G+L L N K +A+
Sbjct: 255 ENMERSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDVKVLVAQTVGS 314
Query: 368 VLVELLSKP--AGRAASLKALYNLSGLDDNATILVDSALLPALT-DILFKSHDASP-ELK 423
LV+L+ R A+LKAL +S + +A +L+ +LP L D+ + + P LK
Sbjct: 315 SLVDLMRSGDMPQREAALKALNKISSFEGSAKVLISKGILPPLIKDLFYVGPNNLPIRLK 374
Query: 424 ELAAATIANVVSNPGCWELASADKLGHSMQSESIXXXXXXXXXXXXPQCQVSTLRILCGI 483
E++A +AN+V N G ++ DK ++ SE+ P Q L +L G+
Sbjct: 375 EVSATILANIV-NIG-YDF---DKA--TLVSENRVENLLHLISNTGPAIQCKLLEVLVGL 427
Query: 484 ASSPQAAESVATHIKSGDGIKYIIQFLEHPEVEH-RTYAFRLTRILSERIGQDLAYAL-K 541
S P+ V IK+ I ++QF+E E + R + +L LS + ++LA AL
Sbjct: 428 TSCPKTVPKVVYAIKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEELAKALCG 487
Query: 542 PFDKLVLFKDKILDNQSANCERSDAACILANIQLSEEEV---KTLLEATFIKWIVITLQT 598
+L I + E++ AA +LA +L + ++ + +LE + I+ +
Sbjct: 488 TAGQLGSLVAIISEKTPITEEQAAAAGLLA--ELPDRDLGLTQEMLEVGAFEKIISKVFG 545
Query: 599 HKSSFNTRSSRPISNIAEGLLGLLLHFTRSVNPQT--LGMVREQRLMTIFRDQLSFPSKA 656
+ + + R ++ EGL+ +L T N + + RE + ++F L +
Sbjct: 546 IRQG-DIKGMRFVNPFLEGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQD 604
Query: 657 RVKQLAAHGLKNLSEAGRSLCAEDTGSPTPRRFCASLVFIC-GKPPPEPTTCPIHNTPCE 715
++ ++A L+NLS S+ P P +C S +F C KP C IH C
Sbjct: 605 NIQMVSAMALENLSL--ESIKLTRMPDPPPVNYCGS-IFSCVRKPHVVNGLCKIHQGICS 661
Query: 716 DDSQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFKRGVDELEREGALD 775
CL++ ++ LV LL E+ V AA+ ALS+L+ D + ++GV L+ +
Sbjct: 662 LRETFCLVEGGAVEKLVALLDHENVKVVEAALAALSSLLED-GLDVEKGVKILDEADGIR 720
Query: 776 AVVDLFTEVRPGLLQERTVWMLERVLRVEGHSHRYSLNQSLVRALVEAFKHGNANAKRHA 835
++++ E R L R VWM+ER+LR+E + + QSL ALV+AF++ + ++ A
Sbjct: 721 HILNVLRENRTERLTRRAVWMVERILRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIA 780
Query: 836 QEALTNLKQISGLS 849
+ AL ++ +I S
Sbjct: 781 ENALKHIDKIPNFS 794
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 244/813 (30%), Positives = 404/813 (49%)
Query: 60 NWD-SELEEDCHILP-----FKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLED 113
+WD S+ + P ++ F+CPLTKQVM PV LE+ Q +ER+AIE WF+ C E+
Sbjct: 6 SWDGSQSDNSSQFEPGIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECREN 65
Query: 114 GRDPTCPVTGQVLKSLELKPNIGLAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKA 173
G+ +CP+T + L +L P+I L IEEW RN +++ ++L N E + L A
Sbjct: 66 GQPLSCPITSKELSITDLSPSIALRNTIEEWRARNDALKLDIARQSLYLGNAETNIL-LA 124
Query: 174 LDIVFKISEEHPSNRYRVRNAGXXXXXXXXXXXXXXXXGTILRSKALMALLSMAK-DEES 232
L V +I R RV N +R KAL L + + DEES
Sbjct: 125 LKNVREICRNIRKIRQRVCNPQLVRLITDMLKSSSHE----VRCKALQTLQVVVEGDEES 180
Query: 233 KKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAYCKSVASEKGALVLLSSMTG 292
K I+ E ++++ L K +E AV +L E EA C+ + S GA++LL +T
Sbjct: 181 KAIVAEGDTVRTIVKFLSQEPSKGREAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTS 240
Query: 293 NL-ELPALSNLADEVFKKMERIEEIVQPLAAAGRFEPLINRLCQGSDNVQIEMAFLVGKL 351
+ E + AD+ +ER EE V+ +A GR +PL+ +L +GS ++ MAF +G L
Sbjct: 241 SKSENVSTVEKADKTLTNLERSEENVRQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVL 300
Query: 352 TLTNSCKEHIARQCAKVLVELLSKP--AGRAASLKALYNLSGLDDNATILVDSALLPALT 409
L N K +A+ L++L+ + R A+L AL N+S + +A +L+++ +LP L
Sbjct: 301 ALNNDVKVIVAQTVGSSLIDLMRTRDMSQREAALGALNNISSFEGSAKLLINTGILPPLI 360
Query: 410 -DILFKSHDASP-ELKELAAATIANVVSNPGCWELASADKLGHSMQSESIXXXXXXXXXX 467
D+ + + P LKE++A +AN+V+ ++ ++ SE I
Sbjct: 361 KDLFYVGPNQLPIRLKEVSATILANIVNIGYDFDKVPVGPHHQTLVSEEIVENLLQLTSN 420
Query: 468 XXPQCQVSTLRILCGIASSPQAAESVATHIKSGDGIKYIIQFLE-HPEVEHRTYAFRLTR 526
P+ Q L +L G+ S P + +V + I++ I ++QF+E H + R + +L
Sbjct: 421 TGPEIQGKLLAVLVGLTSCPNSVINVVSAIRNSAAIISLVQFVEIHENDDLRLASIKLLH 480
Query: 527 ILSERIGQDLAYALKP-FDKLVLFKDKILDNQSANCERSDAAC-ILANIQLSEEEV---- 580
+S + ++LA AL+ +L I +N E AA +LA +L E ++
Sbjct: 481 NISPHMSEELANALRSTVGQLGSLVSIISENTPTITEEQAAAAGLLA--ELPERDLVLTM 538
Query: 581 KTLLEATFIKWIVITLQTHKSSFNTRSSRPISNIAEGLLGLLLHFTRSVNPQTLGMVR-- 638
+ L E F K I + + R R EGL+ +L T ++ +T +
Sbjct: 539 RLLREGAFEKIISKIVGIRQGEI--RGIRFERTFLEGLVSILARITFALTKETDATLFCC 596
Query: 639 EQRLMTIFRDQLSFPSKARVKQLAAHGLKNLSEAGRSLCAEDTGSPTPRRFCASLVFIC- 697
E+ L ++F D L S+ +++ +A L+NLS ++L + P P +C S +F C
Sbjct: 597 EKNLPSLFLDLLQSNSQDNIQRASATALENLSLESKNL-TKIPELPPPT-YCVS-IFSCL 653
Query: 698 GKPPPEPTTCPIHNTPCEDDSQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDT 757
KPP C IH C CL++ + LVDLL E+ V A+ ALSTL+ D
Sbjct: 654 SKPPVVLGICKIHQGICSVRESFCLVEGQAVDKLVDLLDHENDKVVGPALAALSTLLED- 712
Query: 758 SKNFKRGVDELEREGALDAVVDLFTEVRPGLLQERTVWMLERVLRVEGHSHRYSLNQSLV 817
+ +GV ++ + ++++ E R L+ R VWM+ER+LR+E + Q++
Sbjct: 713 GLDVVQGVRLIDEADGITPILNVLLENRTENLRIRAVWMVERILRIEEIAREVGEEQNVT 772
Query: 818 RALVEAFKHGNANAKRHAQEALTNLKQISGLSG 850
ALV+AF++ + ++ A++AL ++ +I SG
Sbjct: 773 AALVDAFQNADFRTRQIAEKALRHIDKIPNFSG 805
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 143 (55.4 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 39/112 (34%), Positives = 56/112 (50%)
Query: 40 LTSLQRILDTWSVVPDVA--ALNWDS-ELEEDCHILPFKNFLCPLTKQVMKEPVVLESAQ 96
++SL + L V D A AL S ++ I+P F CP++ ++M++PV++ S Q
Sbjct: 193 MSSLLKKLKDCVVTEDHANDALTTRSASIKHRSPIIP-DEFRCPISLELMQDPVIVSSGQ 251
Query: 97 AYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIGLAGAIEEWVNRN 148
YER I+ W L+ G TCP T Q L L PN L I +W N
Sbjct: 252 TYERSCIQKW----LDSGHK-TCPKTQQPLSHTSLTPNFVLKSLISQWCEAN 298
Score = 135 (52.6 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 58/226 (25%), Positives = 101/226 (44%)
Query: 226 MAKDEESKKIMLEEGVTKSVIHSLIGNSE-KEKEYAVKLLLEFCIDEAYCKSVASEKGAL 284
+AK + +I + E ++ +L+ +S+ + +E+AV LL I E S+
Sbjct: 350 LAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASIVDSHAIP 409
Query: 285 VLLSSM-TGNLELPALSNLADEVFKKMERIEEIVQPLAAAGRFEPLINRLCQGSDNVQIE 343
++ + TG++E N A +F + ++E + AAG PLIN LC GS + +
Sbjct: 410 KIVEVLKTGSME--TRENAAATLFS-LSVVDENKVTIGAAGAIPPLINLLCDGSPRGKKD 466
Query: 344 MAFLVGKLTLTNSCKEHIARQCAKV-LVELLSKPAGRAA--SLKALYNLSGLDDNATILV 400
A + L + K + + L+ L P G +L L L+G + ++
Sbjct: 467 AATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGKIVIA 526
Query: 401 DSALLPALTDILFKSHDASPELKELAAATIANVVSNPGCWELASAD 446
S +P L +++ K+ SP +E AAA + W L SAD
Sbjct: 527 RSEPIPPLVEVI-KT--GSPRNRENAAAIL---------WLLCSAD 560
Score = 56 (24.8 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 717 DSQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLII 755
++++C+ ++ I LV+LL+ D + AV AL L I
Sbjct: 356 NNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSI 394
Score = 55 (24.4 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 24/93 (25%), Positives = 40/93 (43%)
Query: 216 RSKALMALLSMAKDEESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAYCK 275
R A L S++ +E+K + G +I+ L S + K+ A + CI +
Sbjct: 423 RENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQG--N 480
Query: 276 SVASEKGALVL-----LSSMTGNLELPALSNLA 303
V + K +V+ L TG + ALS L+
Sbjct: 481 KVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLS 513
Score = 43 (20.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 25/124 (20%), Positives = 49/124 (39%)
Query: 716 DDSQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFKRGVDELEREGALD 775
D++++ + + I PL++LL + + A A+ L I N R V + G +
Sbjct: 437 DENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQG-NKVRAV----KAGIVI 491
Query: 776 AVVDLFTEVRPGLLQERTVWMLERVLRVEGHSHRYSLNQSLVRALVEAFKHGNANAKRHA 835
+++ + G++ E L +L + LVE K G+ + +A
Sbjct: 492 HLMNFLVDPTGGMIDEAL--SLLSILAGNPEGKIVIARSEPIPPLVEVIKTGSPRNRENA 549
Query: 836 QEAL 839
L
Sbjct: 550 AAIL 553
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 222 (83.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 82/274 (29%), Positives = 130/274 (47%)
Query: 71 ILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLE 130
ILP + FLCP+T ++M +PV++ + Q YE+++I+ WF D TCP T Q L L
Sbjct: 289 ILPHE-FLCPITLEIMLDPVIIATGQTYEKESIQKWF-----DAGHKTCPKTRQELDHLS 342
Query: 131 LKPNIGLAGAIEEWVNRN------VEV----------QVSTVVETLRKENPEVDGLDKAL 174
L PN L I +W +N EV +VS +VE L + +++ +++
Sbjct: 343 LAPNFALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEAL--SSSQLEEQRRSV 400
Query: 175 DIVFKISEEHPSNRYRVRNAGXXXXXXXXXXXXXXXXGTILRSKALMALLSMAKDEESKK 234
+ ++ E+P NR + NAG ++ A+ LL+++ DE +KK
Sbjct: 401 KQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSG----IQENAVTTLLNLSIDEVNKK 456
Query: 235 IMLEEGVTKSVIHSLI-GNSEKEKEYAVKLLLEFCIDEAYCKSVASEKGA--LV-LLS-- 288
++ EG ++I L GN E + A L +DE ++ G LV LL
Sbjct: 457 LISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKV-TIGLSNGIPPLVDLLQHG 515
Query: 289 SMTGNLE-LPALSNLADEVFKKMERIEE-IVQPL 320
++ G + L AL NL+ K I+ IVQPL
Sbjct: 516 TLRGKKDALTALFNLSLNSANKGRAIDAGIVQPL 549
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 148 (57.2 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 76 NFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNI 135
+F CP+T ++M++PVV+ + Q Y+R++I+ W ++ G + TCP TGQVLK L PN
Sbjct: 277 DFRCPITLELMRDPVVVATGQTYDRESIDLW----IQSGHN-TCPKTGQVLKHTSLVPNR 331
Query: 136 GLAGAIEEW 144
L I W
Sbjct: 332 ALKNLIVLW 340
Score = 95 (38.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 33/125 (26%), Positives = 57/125 (45%)
Query: 718 SQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFKRGVDELEREGALDAV 777
++ C+ ++ I LV LA E +++I AV + L I +N R +E +GAL+ V
Sbjct: 401 ARACIAEAGAIPKLVRYLATECPSLQINAVTTILNLSI-LEQNKTR---IMETDGALNGV 456
Query: 778 VDLFTEVRPGLLQERTVWMLERVLRVEGHSHRYSLNQSLVRALVEAFKHGNANAKRHAQE 837
+++ + L + V + R +V LV+ K G ++KR A
Sbjct: 457 IEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSKRDALV 516
Query: 838 ALTNL 842
A+ NL
Sbjct: 517 AILNL 521
Score = 75 (31.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 34/124 (27%), Positives = 54/124 (43%)
Query: 724 KSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFKRGVDELEREGALDAVVDLFTE 783
K+ + LVDL + T+ + A+ A+ L+ + +N R V+ G + A D F E
Sbjct: 492 KARVVSGLVDLAKQGPTSSKRDALVAILNLVAER-ENVGRFVEA----GVMGAAGDAFQE 546
Query: 784 VRPGLLQERTVWMLERVLRVEGHSHRYSLNQSLVRALVEAFKHGNANAKRHAQEALTNLK 843
L E V ++E V+R G S SL+R L E + G + A L +
Sbjct: 547 -----LPEEAVAVVEAVVR-RGGLMAVSAAFSLIRLLGEVMREGADTTRESAAATLVTMC 600
Query: 844 QISG 847
+ G
Sbjct: 601 RKGG 604
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 126 (49.4 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 50/192 (26%), Positives = 93/192 (48%)
Query: 226 MAKDEESKKIMLEE-GVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAYCKSVASEKGAL 284
+A++ +I++ S++ L E+ + AV LL I++ KS+ +E GA+
Sbjct: 448 LARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNN-KSLIAESGAI 506
Query: 285 VLLSSM--TGNLELPALSNLADEVFKKMERIEEIVQPLAAAGRFEPLINRLCQGSDNVQI 342
V L + TG LE A +N A +F + IEE + AG EPL++ L GS + +
Sbjct: 507 VPLIHVLKTGYLE-EAKANSAATLFS-LSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKK 564
Query: 343 EMAFLVGKLTLTNSCKEHIARQCA-KVLVELLSKPAGRAA-SLKALYNLSGLDDNATILV 400
+ A + L++ + K + A + LVEL+ G ++ L NL+ + + +
Sbjct: 565 DAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFGMVEKAVVVLANLATVREGKIAIG 624
Query: 401 DSALLPALTDIL 412
+ +P L +++
Sbjct: 625 EEGGIPVLVEVV 636
Score = 108 (43.1 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 27/97 (27%), Positives = 42/97 (43%)
Query: 69 CHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKS 128
C + +F C L+ ++M +PV++ S Q +ER I+ W + L CP T Q L
Sbjct: 236 CPVRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLM-----VCPKTRQALSH 290
Query: 129 LELKPNIGLAGAIEEWVNRNVEVQVSTVVETLRKENP 165
L PN + + W N V +E + P
Sbjct: 291 TTLTPNFIVRAFLASWCETN-NVYPPDPLELIHSSEP 326
Score = 85 (35.0 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 42/179 (23%), Positives = 75/179 (41%)
Query: 215 LRSKALMALLSMAKDEESKKIMLEEGVTKSVIHSL-IGNSEKEKEYAVKLLLEFCIDEAY 273
+++ A+ LL+++ ++ +K ++ E G +IH L G E+ K + L + E Y
Sbjct: 479 IQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEY 538
Query: 274 CKSVASEKGALVLLSSMTGNLELPALSNLADEVFKKMERIEEIVQPLAAAGRFEPLINRL 333
K+ E GA+ L + G+ L + A +F E + + A G L+ +
Sbjct: 539 -KTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEA-GAVRYLVELM 596
Query: 334 CQGSDNVQIEMAFLVGKLTLTNSCKEHIARQCA-KVLVEL--LSKPAGRAASLKALYNL 389
V+ + L T+ K I + VLVE+ L G+ + AL L
Sbjct: 597 DPAFGMVEKAVVVLANLATVREG-KIAIGEEGGIPVLVEVVELGSARGKENATAALLQL 654
Score = 66 (28.3 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 49/197 (24%), Positives = 88/197 (44%)
Query: 650 LSFPSKARVKQLAAHGLKNLS--EAGRSLCAEDTGSPTPRRFCASLVFICGKPPPEPTTC 707
L + + R++ A L NLS + +SL AE +G+ P ++ + +
Sbjct: 471 LLYSTDERIQADAVTCLLNLSINDNNKSLIAE-SGAIVPLIHVLKTGYL--EEAKANSAA 527
Query: 708 PIHNTPCEDDSQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFKRGVDE 767
+ + ++ + + ++ I+PLVDLL + + A AL L I K V E
Sbjct: 528 TLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTK--VIE 585
Query: 768 LEREGALDAVVDLFTEVRPGLLQERTVWMLERVLRV-EGHSHRYSLNQSL-VRALVEAFK 825
GA+ +V+L G++ E+ V +L + V EG + ++ + + LVE +
Sbjct: 586 A---GAVRYLVELMDPAF-GMV-EKAVVVLANLATVREG---KIAIGEEGGIPVLVEVVE 637
Query: 826 HGNANAKRHAQEALTNL 842
G+A K +A AL L
Sbjct: 638 LGSARGKENATAALLQL 654
Score = 48 (22.0 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 22/80 (27%), Positives = 36/80 (45%)
Query: 92 LESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIGLAGAIEEWVNRNVEV 151
+E + R I Y ++ L+D + P T +VL +++ + GL N E+
Sbjct: 138 IELVKLVARDEISYTIDQALKDQKKGVGP-TSEVL--VKIAESTGLRS--------NQEI 186
Query: 152 QVSTVVETLRKENPEVDGLD 171
V VV T KE+ E+ D
Sbjct: 187 LVEGVVLTNMKEDAELTDND 206
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 136 (52.9 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 31/96 (32%), Positives = 52/96 (54%)
Query: 72 LPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLEL 131
L ++ LCP++ ++M +PVV+E+ Y+R +I WF G + TCP+TG++L S EL
Sbjct: 287 LKVEDLLCPISLEIMTDPVVIETGHTYDRSSITKWFG----SG-NITCPITGKILTSTEL 341
Query: 132 KPNIGLAGAIEEWVNRNVEVQVSTVVETLRKENPEV 167
N+ + I + N V + RK + +V
Sbjct: 342 VDNVSVRQVIRKHCKTNGIVLAG--ISRRRKSHDDV 375
Score = 96 (38.9 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 37/133 (27%), Positives = 66/133 (49%)
Query: 320 LAAAGRFEPLINRLCQGSDNVQIEMAFLVGKLTLTNSC--KEHIARQCAKVLVELLSKPA 377
L AG PL+ L S +++I+ + G L L+ K IA + K+LVE+L++ A
Sbjct: 426 LVKAGAVTPLLKLL--SSVDIRIQENAMAGILNLSKHVTGKSKIAGEGLKILVEILNEGA 483
Query: 378 G---RAASLKALYNLSGLDDNATILVDSA-LLPALTDILFKSHDASPELKELAA-ATIAN 432
R S AL+ LS ++D + ++ ++ +P L +I+ K D K A A +
Sbjct: 484 KTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIV-KGDDYGDSAKRSALLAVMGL 542
Query: 433 VVSNPGCWELASA 445
++ + W + +A
Sbjct: 543 LMQSDNHWRVLAA 555
Score = 69 (29.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 32/125 (25%), Positives = 58/125 (46%)
Query: 721 CLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFKRGVDELEREGALDAVVDL 780
CL+K+ + PL+ LL+ D ++ A+ I++ SK+ G ++ EG L +V++
Sbjct: 425 CLVKAGAVTPLLKLLSSVDIRIQENAMAG----ILNLSKHVT-GKSKIAGEG-LKILVEI 478
Query: 781 FTEVRPGLLQERTVWMLERVLRVEGHSHRYSLNQSLVRALVEAFK---HGNANAKRHAQE 837
E + + L + VE +S N + L+ K +G++ AKR A
Sbjct: 479 LNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDDYGDS-AKRSALL 537
Query: 838 ALTNL 842
A+ L
Sbjct: 538 AVMGL 542
Score = 50 (22.7 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 378 GRAASLKALYNLSGL---DDNATILVDSALLPALTDILFKSHDASPELKELAAATIANVV 434
G +A AL + GL DN ++ + +P L D+L +S + S L AT+A +
Sbjct: 528 GDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLL-RSGEISGGLTADCLATLAKLA 586
Query: 435 SNP 437
P
Sbjct: 587 EYP 589
Score = 42 (19.8 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 16/81 (19%), Positives = 37/81 (45%)
Query: 215 LRSKALMALLSMAKDEESKKIMLEEGVTKSVIHSLIGNSEKEKE-YAVKLLLEFCIDEAY 273
++ A+ +L+++K K + EG+ K ++ L ++ E Y+ L E Y
Sbjct: 446 IQENAMAGILNLSKHVTGKSKIAGEGL-KILVEILNEGAKTETRLYSASALFYLSSVEDY 504
Query: 274 CKSVASEKGALV-LLSSMTGN 293
+ + A+ L++ + G+
Sbjct: 505 SRLIGENPDAIPGLMNIVKGD 525
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 169 (64.5 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 87/353 (24%), Positives = 146/353 (41%)
Query: 72 LPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLEL 131
+P + CP++ Q+M +PV++ S Q YER IE WF DG + TCP T Q L + L
Sbjct: 271 VPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFS----DGHN-TCPKTQQQLPHISL 325
Query: 132 KPNIGLAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKALDIVFKISEEHPSNRYRV 191
PN + G I W +N T + + E+ ++D AL S+ + V
Sbjct: 326 TPNNCVKGLIASWCEQN-----GTQIPSGPPESQDLDYWRLAL------SDSESTKSQSV 374
Query: 192 RNAGXXXXXXXXXXXXXXXXGTIL-RSKALMALLSMAKDEESKKIMLEEGVTK--SVIHS 248
+ G T++ R + +S DEE I + E +V++
Sbjct: 375 NSIGSYKLKGVKIVPLEENGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNE 434
Query: 249 LIGNSEKEKEYA-VKLLLEFCIDEAYCKSVASEKG---ALV-LLSSMTGNLELPALSNLA 303
G +K K ++LLL+ D+ + G AL+ L S + A + A
Sbjct: 435 EEGLEKKCKVVEKIRLLLK---DDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGA 491
Query: 304 DEVFKKMERIEEIVQPLAAAGRFEPLINRLCQGSDNVQIEMAFLVGKLTLTNSCKEHI-A 362
+F + + +G L+ ++ +++ A + L+ + K I +
Sbjct: 492 MALFNLAVNNNRNKELMLTSGVIR-LLEKMISSAESHGSATALYLN-LSCLDEAKSVIGS 549
Query: 363 RQCAKVLVELLSKPAG---RAASLKALYNLSGLDDNATILVDSALLPALTDIL 412
Q LV+LL K + +L ALYNLS N L+ S ++ +L +L
Sbjct: 550 SQAVPFLVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLL 602
Score = 59 (25.8 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 29/119 (24%), Positives = 54/119 (45%)
Query: 722 LLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFKRGVDE-LEREGALDAVVDL 780
LL SN IK L LLA N+ I ++L+ L+ S + G DE + +G + ++ +
Sbjct: 589 LLSSNIIKSLQGLLASTGENLWIE--KSLAVLLNLASS--QEGKDEAVSSQGMISSLATV 644
Query: 781 FTEVRPGLLQERTVWMLERVLRVEGHSHRYSLNQSLVRALVEAFKHGNANAKRHAQEAL 839
++ QE+ V L + + L + ++ +LV +G + +Q+ L
Sbjct: 645 L-DMGDTTEQEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLL 702
Score = 46 (21.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 614 IAEGLLGLLLHFTRSVNPQTLGMVREQRLMTIFRDQ 649
+ EG++ L+ SVN G + Q+L+ +FR++
Sbjct: 675 LQEGVIPSLVSI--SVNGTPRGREKSQKLLMLFREE 708
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 167 (63.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 60/250 (24%), Positives = 106/250 (42%)
Query: 60 NWDSELEEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTC 119
N D + D +P +FLCP++ ++MK+PV++ + Q YER I+ W + C G + TC
Sbjct: 229 NTDESKKSDKLTIPV-DFLCPVSLELMKDPVIVATGQTYERAYIQRWID-C---G-NLTC 282
Query: 120 PVTGQVLKSLELKPNIGLAGAIEEW-VNRNVEVQVS------------TVVETL--RKEN 164
P T Q L++ L PN L I W N+E +V+ L R +
Sbjct: 283 PKTQQKLENFTLTPNYVLRSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSS 342
Query: 165 PEVDGLDKALDIVFKISEEHPSNRYRVRNAGXXXXXXXXXXXXXXXXGTILRSKALMALL 224
+ A+ + +S+ NR + AG + A+ +L
Sbjct: 343 RSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVAT----QENAITCVL 398
Query: 225 SMAKDEESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCI-DEAYCKSVASEKGA 283
+++ E +K++++ G S++ L + + +E A L + DE K + GA
Sbjct: 399 NLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADEN--KIIIGGSGA 456
Query: 284 LVLLSSMTGN 293
+ L + N
Sbjct: 457 IPALVDLLEN 466
Score = 56 (24.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 717 DSQLCLLKSNCIKPLVDLLAEEDT-NVEIAAVEALSTLIIDTSKNFKRGVDELEREGALD 775
D++ ++K+N + L+ +L + T N E AA LS DT K G R GA+
Sbjct: 529 DAKSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKLITIG-----RLGAVV 583
Query: 776 AVVDL 780
++DL
Sbjct: 584 PLMDL 588
Score = 42 (19.8 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 716 DDSQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFKRGVDELEREGALD 775
D++++ + S I LVDLL + A AL L I N R V R G +
Sbjct: 445 DENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHG-NKGRAV----RAGIVT 499
Query: 776 AVVDLFTE 783
A+V + ++
Sbjct: 500 ALVKMLSD 507
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 129 (50.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 31/92 (33%), Positives = 51/92 (55%)
Query: 64 ELEEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTG 123
E+ + I P+ F CPL+ ++M +PV++ S Q ++R +I+ W L++G CP T
Sbjct: 231 EVAKGISIPPY--FRCPLSTELMLDPVIVASGQTFDRTSIKKW----LDNGL-AVCPRTR 283
Query: 124 QVLKSLELKPNIGLAGAIEEWVNRNVEVQVST 155
QVL EL PN + I W+ N + ++T
Sbjct: 284 QVLTHQELIPNYTVKAMIASWLEAN-RINLAT 314
Score = 98 (39.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 58/198 (29%), Positives = 90/198 (45%)
Query: 248 SLIGNSEK-EKEYAVKLLLEFCIDEAYCKSVASEKGALVLLSSM--TGNLELPALSNLAD 304
SL+ + EK +E+AV LL I E K++ E GA+ L + TGN A N A
Sbjct: 521 SLLYSEEKLTQEHAVTALLNLSISELN-KAMIVEVGAIEPLVHVLNTGNDR--AKENSAA 577
Query: 305 EVFK----KMERIEEIVQPLAAAGRFEPLINRLCQGSDNVQIEMAFLVGKLTLTNSCKEH 360
+F ++ R E I Q AA + L+N L +G+ + + A + L++T+ K
Sbjct: 578 SLFSLSVLQVNR-ERIGQSNAA---IQALVNLLGKGTFRGKKDAASALFNLSITHDNKAR 633
Query: 361 IAR-QCAKVLVELLSKPAGRAASLKALY-NLSGLDDNATILVDSALLPALTDILFKSHDA 418
I + + K LVELL AL NLS + + +V +P L + +
Sbjct: 634 IVQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLG--- 690
Query: 419 SPELKELAAATIANVVSN 436
S KE AA+ + + N
Sbjct: 691 SQRGKENAASVLLQLCLN 708
Score = 79 (32.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 45/226 (19%), Positives = 94/226 (41%)
Query: 214 ILRSKALMALLSMAKDEESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAY 273
+ + A+ ALL+++ E +K +++E G + ++H L +++ KE + L + +
Sbjct: 529 LTQEHAVTALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVN 588
Query: 274 CKSVASEKGALVLLSSMTGNLELPALSNLADEVFKKM---ERIEEIVQPLAAAGRFEPLI 330
+ + A+ L ++ G + A +F + IVQ A A ++ L+
Sbjct: 589 RERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQ--AKAVKY--LV 644
Query: 331 NRLCQGSDNVQIEMAFLVGKLTLTNSCKEHIARQCA-KVLVEL--LSKPAGRAASLKALY 387
L + V +A L+ L+ ++ I R+ +LVE L G+ + L
Sbjct: 645 ELLDPDLEMVDKAVA-LLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLL 703
Query: 388 NLS-GLDDNATILVDSALLPALTDILFKSHDASPELKELAAATIAN 432
L T+++ +P L + S + KE A +++
Sbjct: 704 QLCLNSPKFCTLVLQEGAIPPLVAL---SQSGTQRAKEKAQQLLSH 746
Score = 68 (29.0 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 34/134 (25%), Positives = 59/134 (44%)
Query: 710 HNTPCEDDSQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFKRGVDELE 769
H T ++++ + + I PL+ LL E+ + AV AL L I S+ K + E+
Sbjct: 498 HLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSI--SELNKAMIVEV- 554
Query: 770 REGALDAVVDLFTEVRPGLLQERTVWMLE-RVLRVEGHSHRYSLNQSLVRALVEAFKHGN 828
GA++ +V + + + VL+V + R + + ++ALV G
Sbjct: 555 --GAIEPLVHVLNTGNDRAKENSAASLFSLSVLQV--NRERIGQSNAAIQALVNLLGKGT 610
Query: 829 ANAKRHAQEALTNL 842
K+ A AL NL
Sbjct: 611 FRGKKDAASALFNL 624
Score = 57 (25.1 bits), Expect = 3.3e-05, Sum P(4) = 3.3e-05
Identities = 28/135 (20%), Positives = 60/135 (44%)
Query: 709 IHNTPCEDDSQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFKRGVDEL 768
+ N D++ ++++ +K LV+LL D ++E+ V+ L+ + S G +
Sbjct: 621 LFNLSITHDNKARIVQAKAVKYLVELL---DPDLEM--VDKAVALLANLSA-VGEGRQAI 674
Query: 769 EREGALDAVVDLFTEVRPGLLQERTVWMLERVLRVEGHSHRYSLNQSLVRALVEAFKHGN 828
REG + +V+ ++ +E +L ++ L + + LV + G
Sbjct: 675 VREGGIPLLVET-VDLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGT 733
Query: 829 ANAKRHAQEALTNLK 843
AK AQ+ L++ +
Sbjct: 734 QRAKEKAQQLLSHFR 748
Score = 48 (22.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 23/118 (19%), Positives = 46/118 (38%)
Query: 151 VQVSTVVETLRKENPEVDGLDKALDIVFKISEEHPSNRYRVRNAGXXXXXXXXXXXXXXX 210
VQ V + +P+++ +DKA+ ++ +S + VR G
Sbjct: 635 VQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRG 694
Query: 211 XGTILRSKALMALLSMAKDEESK-KIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEF 267
+ A LL + + ++L+EG ++ +++ KE A +LL F
Sbjct: 695 -----KENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHF 747
Score = 47 (21.6 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 8/31 (25%), Positives = 19/31 (61%)
Query: 563 RSDAACILANIQLSEEEVKTLLEATFIKWIV 593
+ DAA L N+ ++ + +++A +K++V
Sbjct: 614 KKDAASALFNLSITHDNKARIVQAKAVKYLV 644
Score = 45 (20.9 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 17/97 (17%), Positives = 42/97 (43%)
Query: 431 ANVVSNPGCWELASADKLGHSMQSESIXXXXXXXXXXXXPQCQVSTLRILCGIASSP--Q 488
+++ +N G + + S++S S+ + +++ LCG + S +
Sbjct: 326 SSMANNMGSQDFNRTESFRFSLRSSSLTSRSSLETGNGFEKLKINVSASLCGESQSKDLE 385
Query: 489 AAESVA-----THIKSGDGIKYIIQFLEH-PEVEHRT 519
E ++ TH +S + + ++ +++ P V H T
Sbjct: 386 IFELLSPGQSYTHSRS-ESVCSVVSSVDYVPSVTHET 421
Score = 37 (18.1 bits), Expect = 3.3e-05, Sum P(4) = 3.3e-05
Identities = 30/107 (28%), Positives = 45/107 (42%)
Query: 566 AACILANIQLSEEEVKTLLEATFIKWIVITLQTHKSSFNTRSSRPISNIAEGLLGLLLHF 625
A L N+ +SE ++E I+ +V L NT + R N A L L +
Sbjct: 534 AVTALLNLSISELNKAMIVEVGAIEPLVHVL-------NTGNDRAKENSAASLFSLSV-- 584
Query: 626 TRSVNPQTLGMVRE--QRLMTIFRDQLSFPSKARVKQLAAHGLKNLS 670
VN + +G Q L+ + + +F R K+ AA L NLS
Sbjct: 585 -LQVNRERIGQSNAAIQALVNLL-GKGTF----RGKKDAASALFNLS 625
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 148 (57.2 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 31/77 (40%), Positives = 43/77 (55%)
Query: 72 LPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLEL 131
+P + CP++ Q+M +PV++ S Q YER IE WF DG + +CP T Q L L L
Sbjct: 274 IPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFS----DGHN-SCPKTQQQLPHLSL 328
Query: 132 KPNIGLAGAIEEWVNRN 148
PN + G I W +N
Sbjct: 329 TPNYCVKGLIASWCEQN 345
Score = 76 (31.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 218 KALMALLSMAKDEESKKIMLE-EGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAYCKS 276
K+L LL++A E K+ M+ +G+ ++ L E+E AV L+ C C
Sbjct: 612 KSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGSESCIQ 671
Query: 277 VASEKGALVLLSSMTGN 293
+ ++G + L S++ N
Sbjct: 672 MVLQEGVIPSLVSISVN 688
Score = 61 (26.5 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 15/56 (26%), Positives = 33/56 (58%)
Query: 213 TILRSKALMALLSMAKDEESK-KIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEF 267
T+ + +A+ L+ + ES +++L+EGV S++ + S + ++ + KLL+ F
Sbjct: 649 TVEQEQAVSCLVILCTGSESCIQMVLQEGVIPSLVSISVNGSPRGRDKSQKLLMLF 704
Score = 54 (24.1 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 17/72 (23%), Positives = 30/72 (41%)
Query: 549 FKDKILDNQSANCERSDAACILANIQLSEEEVKTLLEATFIKWIVITLQTHKSSFNTRSS 608
F + +L + C + DA L N+ + TLL + IK + + T + +S
Sbjct: 556 FVNLLLQDTKTQC-KLDALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHLWIEKSL 614
Query: 609 RPISNIAEGLLG 620
+ N+A G
Sbjct: 615 AVLLNLASSREG 626
Score = 54 (24.1 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 328 PLINRLCQGSDNVQIEMAFLVGKLTLTNSCKEHI-ARQCAKVLVELL---SKPAGRAASL 383
PL+ ++ S + Q L L+ K I + Q V LL +K + +L
Sbjct: 515 PLLEKMISCSQS-QGPATALYLNLSCLEKAKPVIGSSQAVSFFVNLLLQDTKTQCKLDAL 573
Query: 384 KALYNLSGLDDNATILVDSALLPAL 408
ALYNLS N L+ S ++ +L
Sbjct: 574 HALYNLSTYSPNIPTLLSSNIIKSL 598
Score = 49 (22.3 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 614 IAEGLLGLLLHFTRSVNPQTLGMVREQRLMTIFRDQ 649
+ EG++ L+ SVN G + Q+L+ +FR+Q
Sbjct: 674 LQEGVIPSLVSI--SVNGSPRGRDKSQKLLMLFREQ 707
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 172 (65.6 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 65/255 (25%), Positives = 109/255 (42%)
Query: 54 PDVAALNWDSELEEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLED 113
P +A+ DS + +P F CP++ ++MK+PV++ + Q YER IE W +
Sbjct: 255 PPMASRVLDSNGDSRPITIP-DEFRCPISLELMKDPVIVSTGQTYERACIEKW----IAS 309
Query: 114 GRDPTCPVTGQVLKSLELKPNIGLAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKA 173
G TCP T Q + + L PN L I +W N + K P ++A
Sbjct: 310 GHH-TCPTTQQKMSTSALTPNYVLRSLISQWCETNGMEPPKRSTQP-NKPTPACSSSERA 367
Query: 174 -LD-IVFKI----SEEHPSNRYRVR-----NAGXXXXXXXXXXX---XXXXXGTILRSK- 218
+D ++ K+ +EE S +R NA + LR++
Sbjct: 368 NIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQE 427
Query: 219 -ALMALLSMAKDEESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAYCKSV 277
A+ ALL+++ E++K ++ G S++H L S + +E A L + + Y K
Sbjct: 428 HAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEY-KVT 486
Query: 278 ASEKGALVLLSSMTG 292
GA+ L + G
Sbjct: 487 IGGMGAIPALVVLLG 501
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 153 (58.9 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 32/92 (34%), Positives = 51/92 (55%)
Query: 65 LEEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQ 124
++E+ I PF FLCP++ ++MK+PV++ + Y+R +IE W L G+ +CPVT Q
Sbjct: 6 MDEEIEIPPF--FLCPISLEIMKDPVIVSTGITYDRDSIEKW----LFAGKKNSCPVTKQ 59
Query: 125 VLKSLELKPNIGLAGAIEEWVNRNVEVQVSTV 156
+ +L PN L I+ W N V +
Sbjct: 60 DITDADLTPNHTLRRLIQSWCTLNASYGVERI 91
Score = 61 (26.5 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 33/145 (22%), Positives = 63/145 (43%)
Query: 477 LRILCGIASSPQAAESVATHIKSGDGIKYIIQFLEHPEVEHRTYAFRLTRILSERIGQDL 536
L +L + +S +++ + K + +K + + ++ E R YA L + + E
Sbjct: 165 LNLLYHLETSETVLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQ 224
Query: 537 AYALKP--FDKLVLFKDKILDNQSANCERSDAACILANIQLSEEEVKTLLEATFIKWIVI 594
+ LKP F ++V +ILD++ + A IL NI +EA I ++I
Sbjct: 225 SMTLKPEVFTEVV----QILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVIS-VII 279
Query: 595 TLQTHKSSFNTRSSRPISNIAEGLL 619
L +S + R ++ + LL
Sbjct: 280 ELLMDESFTSERRGPEMAMVVLDLL 304
Score = 49 (22.3 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 25/106 (23%), Positives = 45/106 (42%)
Query: 237 LEEGVTKSVIHSLIG------NSEKEKEYAV-KLLLEFCIDEAYCKSVASEKGALVLLSS 289
+ + TK+ +H L+ N K E V +++E +DE++ + A+V+L
Sbjct: 244 ISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDL 303
Query: 290 MT----GNLELPALSNLADEVFKKMERIEEI-----VQPLAAAGRF 326
+ G E V KK+ R+ + V+ L + GRF
Sbjct: 304 LCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRF 349
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 144 (55.7 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 34/82 (41%), Positives = 45/82 (54%)
Query: 72 LPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLEL 131
+P + CP++ Q+M +PV++ S Q YER IE WF DG + TCP T Q L L L
Sbjct: 278 VPPEELRCPISLQLMYDPVIIASGQTYERICIEKWFS----DGHN-TCPKTHQQLSHLCL 332
Query: 132 KPNIGLAGAIEEWVNRNVEVQV 153
PN + I W +N VQV
Sbjct: 333 TPNYCVKALISSWCEQN-GVQV 353
Score = 78 (32.5 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 218 KALMALLSMAKDEESKKIMLEEGVTKSVIHSLIGNSE-KEKEYAVKLLLEFCIDEAYCKS 276
K+L LL++ +E K M+ S + +++ E E+E AV LLL C C
Sbjct: 610 KSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLILCNHSEICSE 669
Query: 277 VASEKGALVLLSSMTGN 293
+ ++G + L S++ N
Sbjct: 670 MVLQEGVIPSLVSISVN 686
Score = 63 (27.2 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 48/202 (23%), Positives = 87/202 (43%)
Query: 266 EFCIDEAYCKSVASEKGALVLLSSMTGNLELPALSNLADEVFKKMERIEEIVQPLAAAGR 325
E C E V + LL+++T L + +++ ++ EE + G
Sbjct: 406 EACESEYQEDQVTLVERCTELLTTLTDVDTLRKKCRVVEQIRVLLKDDEEARILMGENGC 465
Query: 326 FEPLINRLCQGSD-NVQIEMAFLVGKLTLTNSCKEH-------IARQCAKVLVELLSKPA 377
E L+ L GS N A VG + L N ++ +A +L E+L P
Sbjct: 466 VEALLQFL--GSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEMLCNPH 523
Query: 378 GRAASLKALY-NLSGLDDNATILVDSALLPALTDILFKSHDASPELKELAAAT-IANVVS 435
S+ A+Y NLS L++ ++ S +P + ++L+ + ++ L + ++
Sbjct: 524 SHG-SVTAIYLNLSCLEEAKPVIGSSLAVPFMVNLLWTETEVQCKVDALHSLFHLSTYPP 582
Query: 436 NPGCWELASADKLGHSMQSESI 457
N C L SAD L +++QS +I
Sbjct: 583 NIPC--LLSAD-LVNALQSLTI 601
Score = 60 (26.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 15/53 (28%), Positives = 30/53 (56%)
Query: 216 RSKALMALLSMAKDEE-SKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEF 267
+ +A+ LL + E +++L+EGV S++ + +++ +E A KLL F
Sbjct: 650 QEQAVSLLLILCNHSEICSEMVLQEGVIPSLVSISVNGTQRGRERAQKLLTLF 702
Score = 58 (25.5 bits), Expect = 7.8e-08, Sum P(3) = 7.8e-08
Identities = 24/120 (20%), Positives = 48/120 (40%)
Query: 229 DEESKKIMLEEGVTKSVIH----SLIGNSEKEKEYAVKLLLEFCIDEAYCKSVASEKGAL 284
DEE++ +M E G ++++ +L N+ ++ L +D K + G +
Sbjct: 453 DEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGII 512
Query: 285 VLLSSMTGNLELPALSNLADEVFKKMERIEEIVQPLAAAGRFEPLINRLCQGSDNVQIEM 344
LL M N P ++ + +EE +P+ + P + L VQ ++
Sbjct: 513 PLLEEMLCN---PHSHGSVTAIYLNLSCLEE-AKPVIGSSLAVPFMVNLLWTETEVQCKV 568
Score = 52 (23.4 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 614 IAEGLLGLLLHFTRSVNPQTLGMVREQRLMTIFRD 648
+ EG++ L+ SVN G R Q+L+T+FR+
Sbjct: 672 LQEGVIPSLVSI--SVNGTQRGRERAQKLLTLFRE 704
Score = 50 (22.7 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 221 MALLSMAKDEE-SKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEA 272
MAL ++A D +K++ML G+ + L A+ L L C++EA
Sbjct: 490 MALFNLAVDNNRNKELMLASGIIPLLEEMLCNPHSHGSVTAIYLNLS-CLEEA 541
Score = 40 (19.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 814 QSLVRALVEAFKHGNANAKRHAQEALTNL 842
++L++ L A NA+A++ AL NL
Sbjct: 467 EALLQFLGSALNENNASAQKVGAMALFNL 495
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 139 (54.0 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 68 DCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLK 127
D I K+F+CP++ +M +PV++ + Q Y+R +I W +E+G TCP TGQ+L
Sbjct: 300 DTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARW----IEEGHC-TCPKTGQMLM 354
Query: 128 SLELKPNIGLAGAIEEW 144
+ PN L I +W
Sbjct: 355 DSRIVPNRALKNLIVQW 371
Score = 82 (33.9 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 42/165 (25%), Positives = 71/165 (43%)
Query: 274 CKSVASEKGALVLLSSMTGNLELPALSNLADEVFKKMERIEEIVQPLAAAGRFEPLINRL 333
C+ + SE A+ +S+T L L + ++ + +E IV L + E
Sbjct: 454 CRLLTSEN-AIAQENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVE------ 506
Query: 334 CQGSDNVQIEMAFLVGKLTLTNSCKEHIA--RQCAKVLVELLSK--PAGRAASLKALYNL 389
Q A + L+ + K+ IA QC + L LL P G+ ++ ALYNL
Sbjct: 507 ------AQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNL 560
Query: 390 SGLDDNATILVDSALLPALTDILFKSHDASPELKELAAATIANVV 434
S DN + +++ + +L L K+ + E AA +A +V
Sbjct: 561 STHPDNCSRMIEGGGVSSLVGAL-KNEGVAEE----AAGALALLV 600
Score = 57 (25.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 17/67 (25%), Positives = 36/67 (53%)
Query: 214 ILRSKALMALLSMAKDEESKKIMLEEG-VTKSVIHSLI-GNSEKEKEYAVKLLLEFCIDE 271
I + ++ A+L+++ E++K ++EEG +S++ L+ G + + +E A L
Sbjct: 463 IAQENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVH 522
Query: 272 AYCKSVA 278
Y K +A
Sbjct: 523 EYKKRIA 529
Score = 53 (23.7 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 28/129 (21%), Positives = 48/129 (37%)
Query: 140 AIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKALDIVFKISEEHPSNRYRVRNAGXXXX 199
A+ E+ R V L +N G A+ ++ +S HP N R+ G
Sbjct: 520 AVHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLST-HPDNCSRMIEGGGVSS 578
Query: 200 XXXXXXXXXXXXGTILRSKALMALLSMAKDEESKKIMLEEGVTKSVIHSLIGNSEKEKEY 259
G + +ALL + + ++ I E+ ++ + + + KE
Sbjct: 579 LVGALKNE----GVAEEAAGALALL-VRQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKEN 633
Query: 260 AVKLLLEFC 268
AV LLE C
Sbjct: 634 AVAALLELC 642
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 141 (54.7 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 36/112 (32%), Positives = 57/112 (50%)
Query: 75 KNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPN 134
+ F CPL+ ++M++PVVL S Q Y++ I+ W L G + TCP T QVL L PN
Sbjct: 76 EEFRCPLSNELMRDPVVLASGQTYDKLFIQKW----LSSG-NRTCPKTQQVLPHTALTPN 130
Query: 135 IGLAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKAL--DIVFKISEEH 184
+ + I +W +N S L E+ V D+ + ++ K+S +
Sbjct: 131 LLIREMISKWCKKNGLETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSN 182
Score = 73 (30.8 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 26/108 (24%), Positives = 56/108 (51%)
Query: 329 LINRLCQGS---DNVQIEMAFLVGKLTLTNSCKEHIARQCAKV---LVELLSKP--AGRA 380
L+N L GS + +Q ++ + +++ + + + + V L++ L + A R+
Sbjct: 217 LVNPLLHGSNPDEKLQEDVVTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRS 276
Query: 381 ASLKALYNLSGLDDNATILVDSALLPALTDILFKSHDASPELKELAAA 428
+ A++ LS LD N ++ S +L L D+L + + + +K++AAA
Sbjct: 277 NAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGNPLA--IKDVAAA 322
Score = 64 (27.6 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 716 DDSQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEA-LSTLIIDTSKNFKRGVDELEREGAL 774
D +++ + KS +KPL+DLL EE + I V A + TL I +N R V R+GA+
Sbjct: 289 DSNKVLIGKSGILKPLIDLL-EEGNPLAIKDVAAAIFTLCI-AHENRSRAV----RDGAV 342
Score = 59 (25.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 30/111 (27%), Positives = 53/111 (47%)
Query: 212 GTIL-RSKALMALLSMAKDEESKKIMLEEGVTKSVIHSLI-GNSEKEKEYAVKLLLEFCI 269
GT+ RS A A+ +++ + +K ++ + G+ K +I L GN K+ A + CI
Sbjct: 270 GTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGNPLAIKDVAAAIFT-LCI 328
Query: 270 DEAYCKSVASEKGALVLLSSMTGN-L---ELPALSNLADEVFKKMERIEEI 316
+S A GA+ +L N L EL A+ + +K +E + E+
Sbjct: 329 AHEN-RSRAVRDGAVRVLGKKISNGLYVDELLAILAMLVTHWKAVEELGEL 378
Score = 39 (18.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 780 LFTEVRPGLLQERTVWMLE-RVLRVEGHSHRYSLNQSL--VRALVEAFKHGNANAKRHAQ 836
L +V LQ++ E R+L +G R +S + LV HG+ ++ +
Sbjct: 174 LLCKVSSSNLQDQKSAAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQE 233
Query: 837 EALTNLKQIS 846
+ +T L IS
Sbjct: 234 DVVTTLLNIS 243
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 151 (58.2 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 34/88 (38%), Positives = 51/88 (57%)
Query: 66 EEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQV 125
EE LP K F C L++ VM +PV++ S +ER I+ WF+ +G D +CP++ +
Sbjct: 213 EEHNGTLPEK-FKCTLSRTVMYDPVIISSGNTFERMQIQKWFD----EGND-SCPISKRK 266
Query: 126 LKSLELKPNIGLAGAIEEWVNRN-VEVQ 152
L LKPN+ L I EW +N ++VQ
Sbjct: 267 LDDFTLKPNVELKSQISEWCAKNGLDVQ 294
Score = 68 (29.0 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 219 ALMALLSMAKDEESKKIMLEE-GVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEA-YCKS 276
+++ L ++ E+ + + E S+ L N +E+E A+ +LL+ C+ + YC
Sbjct: 562 SIIILKNLCSTEKGRGCITETPDCLASIAELLESNVPEEQENAISILLQLCVQKIEYCCL 621
Query: 277 VASEK----GALVLLSSM-TGNLELPA--LSNLADEVFKKMERIEEI 316
V E +L+L+S+ T +++ A L EV E EE+
Sbjct: 622 VVREATDIYSSLILISNNGTEEVKVSASELLRALVEVDSDKEEEEEV 668
Score = 55 (24.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 40/172 (23%), Positives = 69/172 (40%)
Query: 287 LSSMTGNLELPALSNLADEVFKKMERIEEIVQPLAAAGRFEPLINRLCQGSDN------- 339
L +T NL A + ++V + E + ++ + EPLI L +
Sbjct: 381 LCGLT-NLPWDAQIKVVEDVRSRFEHSTRAFRSMSPSKFLEPLITYLKNALERNGTAGEI 439
Query: 340 ----VQIEMAFLVGKLTLTNSCKEHIARQCAKVLVELLSKPAGRAASLKALYNLSGLDDN 395
+ + +AFL G S +E + + + V +E S+ A L L LS
Sbjct: 440 IKGGLDLLLAFLSGNRRAIESLEEEVFKMFS-VFLE--SEVVAEEA-LNILEVLSNHPHG 495
Query: 396 ATILVDSALLPALTDILFKSHDASPELKELAAATIANVVSNPG-CWELASAD 446
+ + S L +L I+ + L+E A T+ N+ S+ C E+ S D
Sbjct: 496 PSKITSSGSLSSLLKIV---ESQAEHLQEQAMITLKNLSSSMEICLEMVSLD 544
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 165 (63.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 87/392 (22%), Positives = 160/392 (40%)
Query: 60 NWDSELEEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTC 119
N D + D +P ++FLCP++ ++MK+P ++ + Q YER I+ W + C G + +C
Sbjct: 231 NSDDSQKSDNLTIP-EDFLCPISLELMKDPAIVSTGQTYERSFIQRWID-C---G-NLSC 284
Query: 120 PVTGQVLKSLELKPNIGLAGAIEEWVNR-NVEVQVSTVVETLRKENP----EVDGLDKAL 174
P T Q L++ L PN L I +W + N+E Q + K + ++ G A+
Sbjct: 285 PKTQQKLENFTLTPNYVLRSLISQWCTKHNIE-QPGGYMNGRTKNSDGSFRDLSGDMSAI 343
Query: 175 D-IVFKISEEHPSNRY----RVRNAGXXXXXXXXXXXXXXXXGTILR-----------SK 218
+V K+S + +R +R+ +++
Sbjct: 344 RALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQEN 403
Query: 219 ALMALLSMAKDEESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCI-DEAYCKSV 277
A+ +L+++ E +K++++ G S++ L S + +E A L + DE K +
Sbjct: 404 AVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADEN--KII 461
Query: 278 ASEKGALVLLSSMTGNLELPALSNLADEVFKKMERIEEIVQPLAA-AGRFEPLINRLCQG 336
GA++ L + + + A +F I + + A AG +PL+ L
Sbjct: 462 IGASGAIMALVDLLQYGSVRGKKDAATALFNLC--IYQGNKGRAVRAGIVKPLVKMLTDS 519
Query: 337 SDNVQIEMAFLVGKLTLTNS-CKEHIARQCA-KVLVELLSKPAGRAASLKALYNLSGLDD 394
S + A + + +N K I R A L++ L K R A L
Sbjct: 520 SSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCKR 579
Query: 395 NATILVDSALLPALTDILFKSHDASPELKELA 426
+ L+ L A+ ++ S D + K A
Sbjct: 580 DTEKLISIGRLGAVVPLMELSRDGTERAKRKA 611
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 141 (54.7 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 67 EDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVL 126
E+ I F CP++ ++MK+PV++ S Y+R+ IE WFE + TCPVT VL
Sbjct: 27 EEVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQ-----TCPVTNTVL 81
Query: 127 KSLELKPNIGLAGAIEEW 144
SLE PN + I+ W
Sbjct: 82 TSLEQIPNHTIRRMIQGW 99
Score = 67 (28.6 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 36/134 (26%), Positives = 59/134 (44%)
Query: 725 SNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFKRGVDELEREGA---LDAVVDLF 781
S+ + + + L+ + AA + T + K +R ++ GA L D F
Sbjct: 120 SHQVSEICERLSAATRRGDYAACMEMVTKMTRLGKESERNRKCVKENGAGLVLCVCFDAF 179
Query: 782 TE-VRPGLLQERTV----WMLERVLRVEGHSHRYSLNQSLVRALVEAFKHGNANAKRHAQ 836
+E LL E TV WML + +EG S + + S R LVE ++G+ NA +
Sbjct: 180 SENANASLLLEETVSVLTWMLP--IGLEGQS-KLTTTSSFNR-LVELLRNGDQNAAFLIK 235
Query: 837 EALT-NLKQISGLS 849
E L N+ + L+
Sbjct: 236 ELLELNVTHVHALT 249
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 133 (51.9 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 75 KNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPN 134
K F CP++ +M++PVV + Q Y+R +I W +E+G TCP +GQ L L PN
Sbjct: 299 KEFSCPISLDLMRDPVVASTGQTYDRPSIIQW----IEEGHS-TCPNSGQTLADHRLVPN 353
Query: 135 IGLAGAIEEW 144
L I +W
Sbjct: 354 RALRSLISQW 363
Score = 79 (32.9 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 47/204 (23%), Positives = 85/204 (41%)
Query: 216 RSKALMALLSMAKDEESK-KIMLEEGVTKSVIHSLI-GNSEKEKEYAVKLLLEFCIDEAY 273
+ A+ ALL+++ E +K +IM +EG + ++ L G + + KE A L + +
Sbjct: 458 QENAVTALLNLSIFEPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNF 517
Query: 274 CKSVASEKGALVLLSSMTGNLELPALSNLADEVFKKMERIEEIVQPLAAAGRFEPLINRL 333
K + +E GA+ L+SM + +F E + L + LI L
Sbjct: 518 KKLIMNEPGAVEELASMLTKGTSRGKKDAVMALFNLSTHPESSARMLESCA-VVALIQSL 576
Query: 334 CQGSDNVQIEMAFLVGKLTLTNSCKEHIARQCAKVLVELLS-----KPAGRAASLKALYN 388
+D V E A + L S H+ V+ L+ P G+ ++ ALY
Sbjct: 577 --RNDTVSEEAAGALALLMKQPSIV-HLVGSSETVITSLVGLMRRGTPKGKENAVSALYE 633
Query: 389 LSGLDDNATILVDSALLPALTDIL 412
+ +A ++ A +P L ++
Sbjct: 634 ICRRGGSA-LVQRVAKIPGLNTVI 656
Score = 56 (24.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 16/72 (22%), Positives = 31/72 (43%)
Query: 776 AVVDLFTEVRPGLLQERTVWMLERVLRVEGHSHRYSLNQSLVRALVEAFKHGNANAKRHA 835
AVV L +R + E L +++ H +++++ +LV + G K +A
Sbjct: 568 AVVALIQSLRNDTVSEEAAGALALLMKQPSIVHLVGSSETVITSLVGLMRRGTPKGKENA 627
Query: 836 QEALTNLKQISG 847
AL + + G
Sbjct: 628 VSALYEICRRGG 639
Score = 38 (18.4 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 813 NQSLVRALVEAFKHGNANAKRHAQEALTNLKQISGLSGKA 852
N++ R LV + G+ N K A + + L + +G +A
Sbjct: 397 NKATARILVRMLEDGSENVKAVAAKEIRLLAK-TGKQNRA 435
Score = 37 (18.1 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 11/50 (22%), Positives = 22/50 (44%)
Query: 244 SVIHSLIGNSEKEKEYAVKLLLEFCIDEAYCKSVASEKGALVLLSSMTGN 293
+VI ++ N K + L+++ C ++A V+ S+ GN
Sbjct: 654 TVIQTITLNGTKRAKKKASLIVKMCQRSQMPSAMALGSTLTVVDRSLVGN 703
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 147 (56.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 40/112 (35%), Positives = 58/112 (51%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
F CP++ VMK PV L + Y+R +I+ W DG + TCP T Q+L++ + PN
Sbjct: 14 FRCPISLDVMKSPVSLCTGVTYDRASIQRWL-----DGGNNTCPATMQILQNKDFIPNRT 68
Query: 137 LAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKALDIVFKISEEHPSNR 188
L IE W + V+ T VE+ P D + A+D V KI +E +R
Sbjct: 69 LQRLIEIWSD---SVRRRTCVESAELAAPTRDEIADAIDRV-KIEKEERDDR 116
Score = 54 (24.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 51/223 (22%), Positives = 96/223 (43%)
Query: 218 KALMALLSMAKDEES-KKIMLEEGVTK-SVIHSLIGNSEKEKEYAVKLLLEFCIDEAYCK 275
K L + S D ++L G + SVI L E + LLEF +A K
Sbjct: 171 KILSTIRSKVSDRRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESK 230
Query: 276 SVASEKGALV--LLSSMTGNLELPAL-SNLADEV-FKKMERIEEIVQPLAAAGRFEPLIN 331
+ +E+ L+ L+ S++ + +L + S+L+ + +R++ + G L++
Sbjct: 231 LLIAERDGLITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLS 290
Query: 332 RLCQG-SDNVQIEMAFLVGKLTLTNSCKEHIAR---QCAKVLVELLSKPAGRAA--SLKA 385
S +V + L+ L T + I +C K +V+ L K + A ++
Sbjct: 291 DSTSSLSVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAVTV 350
Query: 386 LYNLSGL--DDNATILVDSALLPALTDILFK-SHDASPELKEL 425
L+++S L +D A V S + +T IL + SP ++ +
Sbjct: 351 LWSVSYLFKEDKALEAVTS--VNGVTKILLLLQSNCSPAVRRM 391
Score = 50 (22.7 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 220 LMALLSMAKDEESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLE----FCIDEAYCK 275
L+ +L+ K+ S+ + K+V+ L+ S E+AV +L F D+A +
Sbjct: 307 LLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAVTVLWSVSYLFKEDKAL-E 365
Query: 276 SVASEKGALVLLSSMTGNLELPALSNLADEVFK 308
+V S G +L + N PA+ + ++ K
Sbjct: 366 AVTSVNGVTKILLLLQSNCS-PAVRRMLTDLLK 397
Score = 42 (19.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 715 EDDSQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFK 762
E S++C C+K +V L + T AA E T++ S FK
Sbjct: 316 EGRSEICGGDGECLKTVVKKLMKVST----AATEHAVTVLWSVSYLFK 359
Score = 38 (18.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 716 DDSQLCLL-KSNCIKPLVDLLAEEDTNVEIAA 746
DD++ L K + +K LVDL+ + D AA
Sbjct: 130 DDNRGFLAGKDDFVKLLVDLINQVDFETTSAA 161
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 150 (57.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 65 LEEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQ 124
++++ I F FLCP++ +MK+PV++ + Y+R++IE W L G+ +CPVT Q
Sbjct: 1 MDQEIEIPSF--FLCPISLDIMKDPVIVSTGITYDRESIEKW----LFSGKKNSCPVTKQ 54
Query: 125 VLKSLELKPNIGLAGAIEEWVNRNVEVQVSTV 156
V+ +L PN L I+ W N + +
Sbjct: 55 VITETDLTPNHTLRRLIQSWCTLNASYGIERI 86
Score = 51 (23.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 700 PPPEPTTCPIH-NTPCEDDSQLCLLKSNCIKPLVDLLAEEDTN---VEIAAV-EALSTLI 754
P P+P C ++ S L + C+K L +++E TN +E A V E L+ ++
Sbjct: 87 PTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQIVSENTTNKRCLEAAEVPEFLANIV 146
Query: 755 ---IDT 757
+DT
Sbjct: 147 SNSVDT 152
Score = 51 (23.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 21/101 (20%), Positives = 40/101 (39%)
Query: 430 IANVVSNPGCWELASADKLGHSMQSESIXXXXXXXXXXXXPQCQVSTLRILCGIASSPQA 489
+AN+VSN + + L S ++ L +L + +S A
Sbjct: 142 LANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSSRSLMDEALSVLYHLDTSETA 201
Query: 490 AESVATHIKSGDGIKYIIQFLEHPEVEHRTYAFRLTRILSE 530
+S+ + K + +K + + ++ E R YA L + L E
Sbjct: 202 LKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLKKLLE 242
Score = 37 (18.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 23/96 (23%), Positives = 40/96 (41%)
Query: 524 LTRILSERIGQDLAYALKPFDKLVLFKDKILDNQSANCERSDAACILANIQLSEEEVKTL 583
LT+I+ I + AYA KL+ D + Q ER + IQ+ +++
Sbjct: 218 LTKIMQRGIYESRAYAALLLKKLLEVADPM---QIILLERELFGEV---IQILHDQISHK 271
Query: 584 LEATFIKWIVITLQTHKSSFNTRSSRPISNIAEGLL 619
+ ++ +VIT ++ IS I E L+
Sbjct: 272 ATRSAMQILVITCPWGRNRHKAVEGGTISMIIELLM 307
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 155 (59.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 35/76 (46%), Positives = 44/76 (57%)
Query: 73 PFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELK 132
P +F CPL K VMKEP + Y+R+AIE W +E+ R T PVT L+++ L
Sbjct: 749 PPSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEW----MENHR--TSPVTNSPLQNVNLL 802
Query: 133 PNIGLAGAIEEWVNRN 148
PN L AI EW NRN
Sbjct: 803 PNHTLYAAIVEWRNRN 818
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 115 (45.5 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 75 KNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPN 134
K F+C L+ +M EPV++ S Q YE++ I W + + TCP T QVL PN
Sbjct: 74 KEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH------ERTCPKTKQVLSHRLWIPN 127
Query: 135 IGLAGAIEEW--VNR 147
++ I +W VN+
Sbjct: 128 HLISDLITQWCLVNK 142
Score = 72 (30.4 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 385 ALYNLSGLDDNATILVDSAL-LPALTDILFKSHDASPELKELAAATIANV 433
AL+NLS L+ N T++ ++ L +P LT L + D E + AAAT++++
Sbjct: 233 ALFNLSILESNKTVIAENCLVIPLLTKSLKQGTD---ETRRNAAATLSSL 279
Score = 60 (26.2 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 351 LTLTNSCKEHIARQCAKVLVELLSKPA--G----RAASLKALYNLSGLDDNATILVDSAL 404
L++ S K IA C +++ LL+K G R + L +LS +D N I+ +S
Sbjct: 237 LSILESNKTVIAENC--LVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIGNSEA 294
Query: 405 LPALTDILFKSHDASPELKELAAATIAN---VVSNPG 438
+ AL D++ + D KE A +T+ N V+ N G
Sbjct: 295 VKALIDLI-EEGDLLAT-KE-ATSTVFNLCIVLENKG 328
Score = 53 (23.7 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 716 DDSQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTL 753
D +++ + S +K L+DL+ E D +A EA ST+
Sbjct: 283 DSNKIIIGNSEAVKALIDLIEEGDL---LATKEATSTV 317
Score = 52 (23.4 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 20/72 (27%), Positives = 32/72 (44%)
Query: 774 LDAVVDLFTEVRPGLLQERTVWMLERVLRVEGHSHRYSLNQSLVRALVEAFKHGNANAKR 833
LD VD E LQE V L + +E + + N ++ L ++ K G +R
Sbjct: 216 LDEAVDSSLE-----LQENIVTALFNLSILESNKTVIAENCLVIPLLTKSLKQGTDETRR 270
Query: 834 HAQEALTNLKQI 845
+A L++L I
Sbjct: 271 NAAATLSSLSAI 282
Score = 48 (22.0 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 717 DSQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDT-SKNFKRGVDELEREGA 773
DS L L+ N + L +L E IA + L+I +K+ K+G DE R A
Sbjct: 221 DSSL-ELQENIVTALFNLSILESNKTVIAE----NCLVIPLLTKSLKQGTDETRRNAA 273
Score = 45 (20.9 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 813 NQSLVRALVEAFKHGNANAKRHAQEALTNLKQISGLSGK 851
N V+AL++ + G+ A + A + NL + GK
Sbjct: 291 NSEAVKALIDLIEEGDLLATKEATSTVFNLCIVLENKGK 329
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 144 (55.7 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 36/114 (31%), Positives = 62/114 (54%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
F CP++ VMK PV L + Y+R +I+ W L+DG + TCP T Q+L++ E PN+
Sbjct: 15 FKCPISLDVMKSPVSLSTGVTYDRVSIQRW----LDDGNN-TCPATMQILQNKEFVPNLT 69
Query: 137 LAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKALDIVFKISEEHPSNRYR 190
L I+ W + ++ + + E+ + P D ++ A++ F+I + S R
Sbjct: 70 LHRLIDHWSD-SINRRADS--ESPESDTPTRDEINAAIER-FRIENDARSKILR 119
Score = 51 (23.0 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 23/100 (23%), Positives = 43/100 (43%)
Query: 218 KALMALLSMAKDEESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCI---DEAYC 274
K L L +++ +E + + + ++V++ L+ S E+AV +L C ++
Sbjct: 294 KCLKLLEAISSCKEGRSEICDGVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKKAQ 353
Query: 275 KSVASEKGALVLLSSMTGNLELPALSNLAD--EVFKKMER 312
+V G +L + N L L D +VFK R
Sbjct: 354 DAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKVFKVNSR 393
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 152 (58.6 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 54/220 (24%), Positives = 96/220 (43%)
Query: 71 ILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLE 130
++P +F CP++ ++M++PV++ S Q YER IE W E G TCP T Q L S
Sbjct: 255 VIP-DDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIE-----GGHSTCPKTQQALTSTT 308
Query: 131 LKPNIGLAGAIEEWVNRNVEVQVSTVVETLRKENPEVDG----LDKALDIVFKISEEHPS 186
L PN L I +W N +++ +LR +K D++++++ +P
Sbjct: 309 LTPNYVLRSLIAQWCEAN-DIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPE 367
Query: 187 NR------YRV---RNAGXXXXXXXXXXX-----XXXXXGTILRSKALMALLSMAKDEES 232
++ R+ RNA + ++ ++ ALL+++ E +
Sbjct: 368 DQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENN 427
Query: 233 KKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFC-IDE 271
K ++ G ++ L S + +E A L IDE
Sbjct: 428 KGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDE 467
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 124 (48.7 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 66 EEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQV 125
E + +I F CP++ VM+ PV L + Y+R +I+ W DG + TCP T Q+
Sbjct: 5 ETETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWL-----DGGNNTCPATMQL 59
Query: 126 LKSLELKPNIGLAGAIEEW 144
LK+ + PN+ L I W
Sbjct: 60 LKTKDFVPNLTLQRLINIW 78
Score = 71 (30.1 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 48/221 (21%), Positives = 96/221 (43%)
Query: 143 EWVNRNVEVQVSTVVETLRKENPEVDGLDKALDIV--FKISEEHPSNRYRVRNAGXXXXX 200
E++++ +E V +V+ +R + +++ + A+ I+ K+ E SN + N G
Sbjct: 135 EFLSKKMEF-VPMLVDIIRTKKTKIELVIMAIRILDSIKVDRERLSN-LMLANDGGDCLT 192
Query: 201 XXXXXXXXXXXGTILRSKALMALLSMAKDEESKKIMLE-EGVTKSVIHSLIGNSEKEKEY 259
+ + S ++ +S D +SK ++ E +GV ++ S I +E
Sbjct: 193 AILLAIQRGNLESKIESVRVLDWISF--DAKSKLMIAERDGVLTEMMKS-ISITESSDPS 249
Query: 260 AVKLLLEFCIDEAYCKSVASEKGALVLLSSMTGNLELPALSNLADEVFKKMERIEEIVQP 319
++ L F I + K V S+ A ++ + L L+N+A V +K ++ E +
Sbjct: 250 LIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVA--VTEKSLKLLETLSS 307
Query: 320 LAAAGRFEPLINRLCQGSDNVQIEMAFLVGKLTLTNSCKEH 360
GR E +C G DN + + L ++ + EH
Sbjct: 308 -KREGRLE-----IC-GDDNGRCVEGVVKKLLKVSTTATEH 341
Score = 43 (20.2 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 773 ALDAVVDLFTEVRPGLLQERTVWMLERVLRVEGHSHRYSLNQSLVRALVEAFKHGNANAK 832
+ DA L R G+L E M++ + E S SL ++ + L+ K +K
Sbjct: 217 SFDAKSKLMIAERDGVLTE----MMKSISITE--SSDPSLIEASLSFLITISKSKRVRSK 270
Query: 833 RHAQEALTNLKQI 845
A +A+T +K I
Sbjct: 271 LIAAKAITKIKDI 283
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 140 (54.3 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 53/238 (22%), Positives = 106/238 (44%)
Query: 72 LPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLE- 130
LP +F CP++ ++M +PV+L+S ++R +I+ W D + TCP+T L
Sbjct: 5 LP-NDFRCPISLEIMSDPVILQSGHTFDRVSIQQWI-----DSGNRTCPITKLPLSETPY 58
Query: 131 LKPNIGLAGAIEEWVNRNVEV-------------QVSTVVETLRKENPEVDGLDKALDIV 177
L PN L I + + +++ Q ++ TL ++ ++L +
Sbjct: 59 LIPNHALRSLILNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRL 118
Query: 178 FKISEEHPSNRYRVRNAGXXXXXXXXXXXXXXXXGTILRSKALMALLSMAKDEESKKIML 237
++++ S R +V +G +L+ K+L LL+++ ++++K ++
Sbjct: 119 VRLTKRDSSIRRKVTESGAVRAALDCVDSC----NQVLQEKSLSLLLNLSLEDDNKVGLV 174
Query: 238 EEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAYCKSVASEKGALVLLSSM--TGN 293
+GV + ++ L S K A LL + E ++ S A+ L S+ GN
Sbjct: 175 ADGVIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGN 232
Score = 46 (21.3 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 32/122 (26%), Positives = 48/122 (39%)
Query: 726 NCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFKRGVDELEREGALDAVVDLFTEVR 785
+ I LV LL + + AL L N KR VD G++ +V+
Sbjct: 219 DAISALVSLLRVGNDRERKESATALYALC-SFPDNRKRVVDC----GSVPILVEAADS-- 271
Query: 786 PGLLQERTVWMLERVLRVEGHSHRYSLNQSLVRALVEAFKHGNANAKRHAQEALTNLKQI 845
GL ER V +L +++ G S V LV ++GN +++ L L
Sbjct: 272 -GL--ERAVEVLGLLVKCRGGREEMSKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLCCC 328
Query: 846 SG 847
SG
Sbjct: 329 SG 330
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 124 (48.7 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 33/114 (28%), Positives = 52/114 (45%)
Query: 76 NFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNI 135
+F CPL+ +VM +PV++ S Q YE+ I+ W + L+ CP T Q L L PN
Sbjct: 236 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLK-----VCPKTRQTLTHTTLIPNY 290
Query: 136 GLAGAIEEWVNRN-VEVQVSTVVETLRKENPEVDGLDKALDIVFKISEEHPSNR 188
+ I W N V++ +L + +P + D +S SN+
Sbjct: 291 TVKALIANWCETNDVKLPDPNKSTSLNELSPLLSCTDSIPSTGADVSARKVSNK 344
Score = 76 (31.8 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 716 DDSQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFKRGVDELEREGALD 775
+++++ + +S I PLVDLL + A AL L I + + GA+
Sbjct: 658 EENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAM-----IVQSGAVR 712
Query: 776 AVVDLFTEVRPGLLQERTVWMLERVLRV-EGHSHRYSLNQSL-VRALVEAFKHGNANAKR 833
++DL + G++ ++ V +L + + EG R ++ Q + LVE + G+A K
Sbjct: 713 YLIDLM-DPAAGMV-DKAVAVLANLATIPEG---RNAIGQEGGIPLLVEVVELGSARGKE 767
Query: 834 HAQEALTNLKQISG 847
+A AL L SG
Sbjct: 768 NAAAALLQLSTNSG 781
Score = 63 (27.2 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 34/163 (20%), Positives = 67/163 (41%)
Query: 693 LVFICGKPPP---EPTTCPIHNTPCEDDSQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEA 749
LV + G P + + N +++ +++S ++ L+DL+ V+ AV
Sbjct: 673 LVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMVD-KAVAV 731
Query: 750 LSTLIIDTSKNFKRGVDELEREGALDAVVDLFTEVRPGLLQERTVWMLERVLRVEGHSHR 809
L+ L G + + +EG + +V++ E+ +E L ++ G
Sbjct: 732 LANLA-----TIPEGRNAIGQEGGIPLLVEV-VELGSARGKENAAAALLQLSTNSGRFCN 785
Query: 810 YSLNQSLVRALVEAFKHGNANAKRHAQEALTNLK-QISGLSGK 851
L + V LV + G A+ AQ L+ + Q G +G+
Sbjct: 786 MVLQEGAVPPLVALSQSGTPRAREKAQALLSYFRNQRHGNAGR 828
Score = 54 (24.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 29/132 (21%), Positives = 52/132 (39%)
Query: 656 ARVKQLAAHGLKNLSEAGRSLCAEDTGSPTPRRFCASLVFICGKPPPEPTTCPIHNTPCE 715
A ++ LA H + N G S G+ L++ E + N
Sbjct: 566 AELRLLAKHNMDNRIVIGNS------GAIV---LLVELLYSTDSATQENAVTALLNLSIN 616
Query: 716 DDSQLCLLKSNCIKPLVDLLAEEDTNV-EIAAVEALSTLIIDTSKNFKRGVDELEREGAL 774
D+++ + + I+PL+ +L + E +A S +I+ +K K G + GA+
Sbjct: 617 DNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENK-IKIG-----QSGAI 670
Query: 775 DAVVDLFTEVRP 786
+VDL P
Sbjct: 671 GPLVDLLGNGTP 682
Score = 39 (18.8 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 553 ILDNQSANCERSDAACILANIQLSEEEVK 581
+L+N S+ + + AA + + + E ++K
Sbjct: 635 VLENGSSEAKENSAATLFSLSVIEENKIK 663
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 132 (51.5 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 72 LPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLEL 131
+P+ +F CP++ ++M++PV + + Q Y+R +IE W + G + TCPVT L L
Sbjct: 14 IPY-HFRCPISLELMQDPVTVCTGQTYDRASIESW----VSIGNNTTCPVTRAPLSDFTL 68
Query: 132 KPNIGLAGAIEEW--VNRNVEVQ 152
PN L I+EW NR+ V+
Sbjct: 69 IPNHTLRRLIQEWCVANRSNGVE 91
Score = 54 (24.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 46/224 (20%), Positives = 94/224 (41%)
Query: 216 RSKALMALLSMAKDEESKKIMLE-EGVTKSVIHSLIG---NSEKEKEYAVKLLLEFCIDE 271
R+ AL L A+D + ++++ T+ +I L +SE E ++ LL+ I E
Sbjct: 125 RAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSE-SLALLVMLPITE 183
Query: 272 A-YCKSVASEKGALVLLSSMTGNLELPALSNLAD--EVFKKMERIEEIVQPLA-AAGRFE 327
S++S+ G + L+ + + + N A E+ + ++ ++ + FE
Sbjct: 184 PNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFE 243
Query: 328 PLINRLCQGSDNVQIEMAFLVGKLTLTNSCK----EHIARQCA--KVLVELLSKPAGRAA 381
+++ L + + A +G TL C HIA ++L++ L+ R
Sbjct: 244 GVLDLL---RNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCD 300
Query: 382 SLKALYNLSGL---DDNATILVDSAL-LPALTDILFKSHDASPE 421
+ +AL + L + + AL +P L + + D + E
Sbjct: 301 TERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATE 344
Score = 53 (23.7 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 18/74 (24%), Positives = 33/74 (44%)
Query: 218 KALMALLSMAKDEESKKIMLEEGVTKSV-IHSLIGNSEKEKEYAVKLLLEFCIDEAYCKS 276
+AL + + + E E +T + + +++ S++ EYA LL C E +
Sbjct: 303 RALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTAEERWRE 362
Query: 277 VASEKGALVLLSSM 290
A+ G +V L M
Sbjct: 363 EAAGAGVVVQLLLM 376
Score = 46 (21.3 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 17/69 (24%), Positives = 29/69 (42%)
Query: 379 RAASLKALYNLS-GLDDNATILVDSALLPALTDILFKSHDASPELKELAAATIANVVSNP 437
RAA+L+ L + D N ++ L ILF +S + E A + ++ P
Sbjct: 125 RAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEP 184
Query: 438 GCWELASAD 446
+ S+D
Sbjct: 185 NQFVSISSD 193
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 140 (54.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 26/70 (37%), Positives = 44/70 (62%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
F+CP+T+++MK+P++ +YE++A+E W R + T P+T VL S+ L PN
Sbjct: 407 FICPITRELMKDPIIASDGYSYEKEAMENWISR-----KKRTSPMTNLVLSSVILTPNRT 461
Query: 137 LAGAIEEWVN 146
L AI+ W++
Sbjct: 462 LKMAIDRWLS 471
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 140 (54.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 26/70 (37%), Positives = 44/70 (62%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
F+CP+T+++MK+P++ +YE++A+E W R + T P+T VL S+ L PN
Sbjct: 408 FICPITRELMKDPIIASDGYSYEKEAMENWISR-----KKRTSPMTNLVLSSVILTPNRT 462
Query: 137 LAGAIEEWVN 146
L AI+ W++
Sbjct: 463 LKMAIDRWLS 472
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 112 (44.5 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 27/74 (36%), Positives = 36/74 (48%)
Query: 75 KNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPN 134
K F C L+K +M +PV++ S Q YE++ I W D TCP QVL + L PN
Sbjct: 76 KEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNH------DLTCPTAKQVLYRVCLTPN 129
Query: 135 IGLAGAIEEWVNRN 148
+ I W N
Sbjct: 130 HLINELITRWCLAN 143
Score = 62 (26.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 38/162 (23%), Positives = 68/162 (41%)
Query: 214 ILRSKALMALLSMAKDEESKKIMLEEGVTKSVIHSLIGNSE--KEKEYAVKLLLEFCIDE 271
+ R A + L S++ D +S KI++ V + LIG + A+ +++ C DE
Sbjct: 273 VTRRNATLTLASLS-DIDSNKIIIGNSVALKALIDLIGELDDLSATHDALCAVIDLCCDE 331
Query: 272 AYCKSVASEKGALVLLSSMTGNLELPALSNLADEV--FKKMERIEEIVQPLAAAGRFEPL 329
A G L + N++ A NL + + + E ++Q +A G L
Sbjct: 332 RENWKKAISLG---LAPAAIKNIK--ARRNLFESLAALALISPHERVIQEVANLGVIYDL 386
Query: 330 INRLCQGSDNVQIEMAFLVGKLTLTNSCKEHIARQCAKVLVE 371
++ L + S V E A ++ + N + R K+L E
Sbjct: 387 LSILRKTSCMVTCENAVVI----VGNMYAKSRERSIKKILAE 424
Score = 58 (25.5 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 14/51 (27%), Positives = 29/51 (56%)
Query: 716 DDSQLCLLKSNCIKPLVDLLAE-EDTNVEIAAVEALSTLIIDTSKNFKRGV 765
D +++ + S +K L+DL+ E +D + A+ A+ L D +N+K+ +
Sbjct: 289 DSNKIIIGNSVALKALIDLIGELDDLSATHDALCAVIDLCCDERENWKKAI 339
Score = 58 (25.5 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 16/67 (23%), Positives = 35/67 (52%)
Query: 371 ELLSKPAGRAASLKALYNLSGLDDNATILVDS-ALLPALTDILFKSHDASPELKELAAAT 429
E+ S P + + AL+N+S + N T+L ++ ++P L + + + L A+
Sbjct: 225 EVDSNPELQENIVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLAS 284
Query: 430 IANVVSN 436
++++ SN
Sbjct: 285 LSDIDSN 291
Score = 57 (25.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 379 RAASLKALYNLSGLDDNATILVDSALLPALTDILFKSHDASPELKELAA 427
R A+L L +LS +D N I+ +S L AL D++ + D S L A
Sbjct: 276 RNATL-TLASLSDIDSNKIIIGNSVALKALIDLIGELDDLSATHDALCA 323
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 121 (47.7 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 79 CPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIGLA 138
CP++ ++M +PVVLES Y+R +I WF G + TCP TG+ L S L N +
Sbjct: 284 CPISLEIMSDPVVLESGHTYDRSSITKWFA----SG-NITCPKTGKTLVSTVLVDNFSVK 338
Query: 139 GAIEEWVNRN 148
I+ + +N
Sbjct: 339 QVIQSYSKQN 348
Score = 70 (29.7 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 38/165 (23%), Positives = 63/165 (38%)
Query: 173 ALDIVFKISEEHPSNRYRVRNAGXXXXXXXXXXXXXXXXGTILRSKALMALLSMAKDEES 232
AL + + P N +R+ AG G S A++A MA+ +
Sbjct: 524 ALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILA--KMAEYPDG 581
Query: 233 KKIMLEEGVTKSVIHSLIGNSEKE---KEYAVKLLLEFCIDEA--YCKSVASEKGALVLL 287
+L G K + ++G+SE K++ V LLL C + S+A + L
Sbjct: 582 MISVLRRGGLKLAV-KILGSSEVSPATKQHCVALLLNLCHNGGSDVVGSLAKNPSIMGSL 640
Query: 288 SSMTGNLELPALSNLADEVFKKMERIEEIVQPLAAAGRFEPLINR 332
+ + N EL A + K + +E G EP++ R
Sbjct: 641 YTASSNGELGG-GKKASALIKMIHEFQE-----RKTGPGEPVLER 679
Score = 52 (23.4 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 46/233 (19%), Positives = 91/233 (39%)
Query: 218 KALMALLSMAKDEES-KKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEA-YCK 275
KAL+ + + K + ++E GV +S++ L + + +E A+ ++ D A +
Sbjct: 393 KALVEIRILTKTSTFYRSCLVEAGVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTR 452
Query: 276 SVASEKGAL-VLLSSMTGNLELPALSNLADEVF--KKMERIEEIVQPLAAAGRFEPLINR 332
V + G L +++ + + A +F + ++ ++ A I +
Sbjct: 453 IVGEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVK 512
Query: 333 LCQGSDNVQIEMAFLVGKLTLTNSCKEH---IARQCAKVLVELLSKPA---GRAA-SLKA 385
C D+ + + L L N H +A VL++L+ G A S+
Sbjct: 513 SCDYGDSAKRNALIAIRSL-LMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAI 571
Query: 386 LYNLSGLDDNATILVDSALLPALTDILFKSHDASPELKELAAATIANVVSNPG 438
L ++ D ++ L IL S + SP K+ A + N+ N G
Sbjct: 572 LAKMAEYPDGMISVLRRGGLKLAVKILGSS-EVSPATKQHCVALLLNLCHNGG 623
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 133 (51.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 59 LNW-DSELEEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDP 117
L+W +SE E + I P F CP++ +MK+PV++ + Y+R +IE W + G +
Sbjct: 18 LSWPESEPESEITIPP--EFQCPISIDLMKDPVIISTGITYDRVSIETW----INSG-NK 70
Query: 118 TCPVTGQVLKSLELKPNIGLAGAIEEW 144
TCPVT VL + + PN + I+ W
Sbjct: 71 TCPVTNTVLTTFDQIPNHTIRKMIQGW 97
Score = 50 (22.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 19/81 (23%), Positives = 38/81 (46%)
Query: 315 EIVQPLAAAGRFEPLINRLCQGSDNVQIEMAFLVGKLTLTNSCKEH---IARQCAKVLVE 371
E + LA+A F + L D+V+ AF++ ++ + + H + A+ LV+
Sbjct: 203 EGISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVAEALVK 262
Query: 372 LLSKPAGRAA---SLKALYNL 389
L+ ++ SL A+Y +
Sbjct: 263 LIRDSVSSSSTKSSLIAIYQM 283
Score = 37 (18.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 12/62 (19%), Positives = 23/62 (37%)
Query: 764 GVDELEREGALDAVVDLFTEVRPGLLQERTVWMLERVLRVEGHSHRYSLNQSLVRALVEA 823
G+ +L + V L + Q M E + E H +++ + ALV+
Sbjct: 204 GISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVAEALVKL 263
Query: 824 FK 825
+
Sbjct: 264 IR 265
>TAIR|locus:2195351 [details] [associations]
symbol:IMPA-4 "AT1G09270" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=ISS;RCA] [GO:0008565 "protein transporter activity"
evidence=IEA;ISS] [GO:0030581 "symbiont intracellular protein
transport in host" evidence=IPI] [GO:0080034 "host response to
induction by symbiont of tumor, nodule or growth in host"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006007 "glucose catabolic
process" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006820 "anion transport" evidence=RCA]
[GO:0006862 "nucleotide transport" evidence=RCA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=RCA] [GO:0006944
"cellular membrane fusion" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0015696
"ammonium transport" evidence=RCA] [GO:0015802 "basic amino acid
transport" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0043090 "amino acid
import" evidence=RCA] [GO:0043269 "regulation of ion transport"
evidence=RCA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
EMBL:CP002684 GO:GO:0005829 GO:GO:0005634 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0006606
EMBL:AC003114 GO:GO:0043657 HOGENOM:HOG000167616 HSSP:Q02821
UniGene:At.48171 UniGene:At.66826 EMBL:AY090944 EMBL:AY117313
EMBL:AK316689 IPI:IPI00537215 PIR:F86225 RefSeq:NP_172398.1
RefSeq:NP_849623.1 SMR:O80480 IntAct:O80480 STRING:O80480
EnsemblPlants:AT1G09270.1 EnsemblPlants:AT1G09270.2 GeneID:837448
KEGG:ath:AT1G09270 TAIR:At1g09270 InParanoid:O80480 OMA:IQMIFSS
ProtClustDB:CLSN2679246 Genevestigator:O80480 GO:GO:0080034
GO:GO:0030581 Uniprot:O80480
Length = 538
Score = 118 (46.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 58/230 (25%), Positives = 106/230 (46%)
Query: 215 LRSKALMALLSMAKD-EESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAY 273
L+ +A AL ++A + ++++E+G + L S+ +E AV L D
Sbjct: 139 LQFEAAWALTNVASGTSDHTRVVIEQGAVPIFVKLLTSASDDVREQAVWALGNVAGDSPN 198
Query: 274 CKSVASEKGALV-LLSSMTGNLELPALSNLADEVFKKMERIEEIVQPLAAAGRFEPLINR 332
C+++ GAL LL+ + N +L L N A R + P P++ +
Sbjct: 199 CRNLVLNYGALEPLLAQLNENSKLSMLRN-ATWTLSNFCRGKPPT-PFEQVKPALPILRQ 256
Query: 333 LCQGSDN-VQIEMAFLVGKLTLTNSCKEHI---ARQCAKVLVELLS--KPAGRAASLKAL 386
L +D V + + + L+ + K A C + LVELL P +L+ +
Sbjct: 257 LIYLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPR-LVELLGHQSPTVLIPALRTV 315
Query: 387 YNLSGLDDNAT-ILVDSALLPALTDILFKSHDASPELKELAAATIANVVS 435
N+ DD+ T +++S +LP L ++L ++H S +K+ A TI+N+ +
Sbjct: 316 GNIVTGDDSQTQFIIESGVLPHLYNLLTQNHKKS--IKKEACWTISNITA 363
Score = 68 (29.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 25/86 (29%), Positives = 37/86 (43%)
Query: 722 LLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLI----IDTSKNFKRGVDE----LEREGA 773
L+ CIKPL DLL D + +E L ++ D GV+ +E
Sbjct: 415 LVTQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKEMGLNSGVNLYAQIIEESDG 474
Query: 774 LDAVVDLFTEVRPGLLQERTVWMLER 799
LD V +L + + E+ V +LER
Sbjct: 475 LDKVENLQSHDN-NEIYEKAVKILER 499
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
F+CP+T+++MK+PV+ +YER+A+E W + + T P+T L SL L PN
Sbjct: 406 FICPITRELMKDPVIASDGYSYEREAMESWIHK-----KKRTSPMTNLALPSLVLTPNRT 460
Query: 137 LAGAIEEWV 145
L AI W+
Sbjct: 461 LKMAINRWL 469
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
FLCP+T+++MK+PV+ +YE++A+E W + + T P+T +L S+ L PN
Sbjct: 408 FLCPITRELMKDPVIASDGYSYEKEAMENWISK-----KKRTSPMTNLILPSMVLTPNRT 462
Query: 137 LAGAIEEWV 145
L AI W+
Sbjct: 463 LKMAISRWL 471
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
F+CP+T+++MK+PV+ +YER+A+E W + + T P+T L SL L PN
Sbjct: 408 FICPITRELMKDPVIASDGYSYEREAMESWIHK-----KKRTSPMTNLALPSLVLTPNRT 462
Query: 137 LAGAIEEWV 145
L AI W+
Sbjct: 463 LKMAINRWL 471
>TAIR|locus:2083313 [details] [associations]
symbol:IMPA-1 "importin alpha isoform 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=ISS] [GO:0008565 "protein transporter
activity" evidence=ISS] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR002652
InterPro:IPR016024 InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749
PIRSF:PIRSF005673 PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
EnsemblPlants:AT3G06720.1 GO:GO:0005829 GO:GO:0005618 GO:GO:0005635
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
eggNOG:COG5064 GO:GO:0006606 EMBL:AC036106 EMBL:AC023912
EMBL:L81172 EMBL:AF077528 EMBL:U69533 EMBL:Y15224 EMBL:AY094390
EMBL:AY054164 EMBL:AY088732 EMBL:AY125529 IPI:IPI00521658
PIR:T52102 PIR:T52268 RefSeq:NP_187328.1 RefSeq:NP_850524.1
UniGene:At.24233 ProteinModelPortal:Q96321 SMR:Q96321 IntAct:Q96321
STRING:Q96321 PaxDb:Q96321 PRIDE:Q96321 EnsemblPlants:AT3G06720.2
GeneID:819857 KEGG:ath:AT3G06720 TAIR:At3g06720
HOGENOM:HOG000167616 InParanoid:Q96321 OMA:QPDWTTI PhylomeDB:Q96321
ProtClustDB:CLSN2684669 Genevestigator:Q96321 GermOnline:AT3G06720
Uniprot:Q96321
Length = 532
Score = 108 (43.1 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 57/233 (24%), Positives = 105/233 (45%)
Query: 215 LRSKALMALLSMAKD-EESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAY 273
++ +A AL ++A + K++++ + L S+ +E AV L D
Sbjct: 132 IQFEAAWALTNIASGTSDHTKVVIDHNAVPIFVQLLASPSDDVREQAVWALGNVAGDSPR 191
Query: 274 CKSVASEKGALV-LLSSMTGNLELPALSN----LADEVFKKMERIEEIVQPLAAAGRFEP 328
C+ + GAL+ LL+ + + +L L N L++ K + + V+P P
Sbjct: 192 CRDLVLGCGALLPLLNQLNEHAKLSMLRNATWTLSNFCRGKPQPHFDQVKPAL------P 245
Query: 329 LINRLCQGSDN-VQIEMAFLVGKLTLTNSCKEHIARQCAKV--LVELL--SKPAGRAASL 383
+ RL D V + + + L+ + K Q V LVELL P+ +L
Sbjct: 246 ALERLIHSDDEEVLTDACWALSYLSDGTNDKIQTVIQAGVVPKLVELLLHHSPSVLIPAL 305
Query: 384 KALYNLSGLDDNAT-ILVDSALLPALTDILFKSHDASPELKELAAATIANVVS 435
+ + N+ DD T +++S LP L ++L ++H S +K+ A TI+N+ +
Sbjct: 306 RTVGNIVTGDDIQTQCVINSGALPCLANLLTQNHKKS--IKKEACWTISNITA 356
Score = 61 (26.5 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 722 LLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLI 754
L++ CIKPL DLL D + +E L ++
Sbjct: 408 LVEQGCIKPLCDLLVCPDPRIITVCLEGLENIL 440
Score = 58 (25.5 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 14/56 (25%), Positives = 30/56 (53%)
Query: 563 RSDAACILANIQL-SEEEVKTLLEATFIKWIVITLQTHKSSFNTRSSRPISNIAEG 617
+ +A ++NI ++++++T++EA I +V LQ + ++ ISN G
Sbjct: 344 KKEACWTISNITAGNKDQIQTVVEANLISPLVSLLQNAEFDIKKEAAWAISNATSG 399
Score = 40 (19.1 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 597 QTHKSSFNTRSSRPISNIAEG 617
Q HK S + ISNI G
Sbjct: 337 QNHKKSIKKEACWTISNITAG 357
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 30/84 (35%), Positives = 44/84 (52%)
Query: 62 DSELEEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPV 121
+ E H P + F+CP+T +M++P V YE +AI WFER G + T P+
Sbjct: 342 EEEASTSNHREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFER----GHE-TSPM 396
Query: 122 TGQVLKSLELKPNIGLAGAIEEWV 145
+ L L PN+ L AI+EW+
Sbjct: 397 INKRLPHTSLVPNLALRSAIQEWL 420
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 123 (48.4 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 29/83 (34%), Positives = 45/83 (54%)
Query: 72 LPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLEL 131
+P+ +F CP++ +M +PV + + Q Y+R +I+ W G + TCPVT L L
Sbjct: 14 IPY-HFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAM----G-NTTCPVTRVALSDFTL 67
Query: 132 KPNIGLAGAIEEW--VNRNVEVQ 152
PN L I+EW NR+ V+
Sbjct: 68 IPNHTLRRLIQEWCVANRSNGVE 90
Score = 57 (25.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 245 VIHSLIGNSEKEKEYAVKLLLEFCIDEAYCKSVASEKGALVLL 287
++ +++ S++ EYA LL C E C+ A+ G + L
Sbjct: 333 MVKTILRVSDRATEYAAGALLALCTAEERCRDEAAAAGLVTQL 375
Score = 46 (21.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 16/73 (21%), Positives = 37/73 (50%)
Query: 216 RSKALMALLSMAKDEESKKIMLEEGVTKSVIHSLIG--------NSEKEKEYAVKLLLEF 267
R+ A+ L +A+D E ++++ + ++ ++ +SE E ++ LL+
Sbjct: 124 RAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSE-SLALLVLL 182
Query: 268 CIDEAYCKSVASE 280
+ E C++VAS+
Sbjct: 183 HMTETECEAVASD 195
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 133 (51.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
F+CP+T+++MK+PV+ +YE++A+E W + + T P+T VL S L PN
Sbjct: 408 FICPITRELMKDPVIASDGYSYEKEAMENWISK-----KKRTSPMTNLVLPSAVLTPNRT 462
Query: 137 LAGAIEEWV 145
L AI W+
Sbjct: 463 LKMAINRWL 471
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 133 (51.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 33/108 (30%), Positives = 55/108 (50%)
Query: 40 LTSLQRILDTWSVVPDVAALNWDSELEEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYE 99
L + R +D P+V + S ++ P ++LCP+ ++VMK+P++ YE
Sbjct: 703 LAVVLRFIDRMKA-PEVPSSETSSYANQNVPRRPPSHYLCPIFQEVMKDPLIAADGFTYE 761
Query: 100 RKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIGLAGAIEEWVNR 147
+AI W L +G D T P+T ++ L PN L AI++W N+
Sbjct: 762 AEAIREW----LANGHD-TSPMTNLKMEDCNLIPNHALHLAIQDWQNQ 804
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 107 (42.7 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 31/102 (30%), Positives = 47/102 (46%)
Query: 73 PFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLE-L 131
P FLCP++K VM +PVV+ S Q +ER ++ C + P + L +
Sbjct: 33 PPVEFLCPISKSVMSDPVVVSSGQTFERVCVQV----CRDLNFIPKLNDDEESLPDFSNI 88
Query: 132 KPNIGLAGAIEEW-----VNRNVEVQVSTVVETLRKENPEVD 168
PN+ + I+ W V+R STV LR++ P D
Sbjct: 89 IPNLNMKSTIDTWCDTVGVSRPQPPDYSTVERILRQQMPPPD 130
Score = 72 (30.4 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 56/236 (23%), Positives = 101/236 (42%)
Query: 567 ACILANIQLSEEEVKTLLEATFIKWIVITL-QTHKSSFNTRSSRPISNIAEGLLGLLLHF 625
AC + S E++TL TF T + + +N S I + +GL+ ++
Sbjct: 193 ACFSPSPSSSSSEIETLTHHTFFSNSTSTATEEDEVIYNKLKSSEIFDQEQGLI-MMRKM 251
Query: 626 TRSVNPQTLGMVREQRLMTIFRDQL-SFPSKARVKQLAAHGLKNLS-EAGRSLCAEDTGS 683
TR+ N + + R++++ ++ + S S + LA+ L NLS + L G
Sbjct: 252 TRT-NDEARVSLCSPRILSLLKNMIVSRYSLVQTNALAS--LVNLSLDKKNKLTIVRLGF 308
Query: 684 PTPRRFCASLVFICGKPPPEPTTCPIHNTPCEDDSQLCLLKSNCIKPLVDLL--AEEDTN 741
P ++ + E I + EDD+++ + ++PL+ L AE D
Sbjct: 309 -VP--ILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRAAESDRT 365
Query: 742 VEIAAVEALSTLIIDTSKNFKRGVDELEREGALDAVVDLFTEVRPGLLQERTVWML 797
+A+ AL L ++ + K L R GA+ A LF+ VR G R + ++
Sbjct: 366 RHDSAL-ALYHLTLNQTNRSK-----LVRLGAVPA---LFSMVRSGESASRALLVI 412
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 131 (51.2 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 76/342 (22%), Positives = 135/342 (39%)
Query: 71 ILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLE 130
++P + F CP++ ++MK+PV++ + Q YER +I+ W D TCP + + L
Sbjct: 247 VIP-EYFRCPISLELMKDPVIVSTGQTYERSSIQKWL-----DAGHKTCPKSQETLLHAG 300
Query: 131 LKPNIGLAGAIEEWVNRN-VEV-QVSTVVETLRKENPEVDGLDKA--LDIVFKIS----E 182
L PN L I W N +E+ Q T + D+ L ++ K++ E
Sbjct: 301 LTPNYVLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTE 360
Query: 183 EH--PSNRYRV---RNAGXXXXXXXXXXX-----XXXXXGTILRSKALMALLSMAKDEES 232
+ + R+ RN + ++ ALL+++ +E +
Sbjct: 361 QQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGN 420
Query: 233 KKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFC-IDEAYCKSVASEKGALVLLSSMT 291
K +++ G ++ L S + +E A L IDE K GA+ L S+
Sbjct: 421 KGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDEN--KVAIGAAGAIQALISLL 478
Query: 292 GNLELPALSNLADEVFKKMERIEEIVQPLAAAGRFEPLINRLCQGSDNVQIEMAFLVGKL 351
+ A +F I + + A G + RL + + ++ A + +
Sbjct: 479 EEGTRRGKKDAATAIFNLC--IYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAI 536
Query: 352 TLTNS-CKEHIAR-QCAKVLVELL--SKPAGRAASLKALYNL 389
TN K IA + VLVE++ P R + L+ L
Sbjct: 537 LSTNQEGKTAIAEAESIPVLVEIIRTGSPRNRENAAAILWYL 578
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 129 (50.5 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 54/226 (23%), Positives = 104/226 (46%)
Query: 215 LRSKALMALLSMAKDEESKKIML-EEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAY 273
++ A L +AK+ ++++ E G +++I L N +E+AV LL + +
Sbjct: 199 IKRSAAAKLRLLAKNRADNRVLIGESGAIQALIPLLRCNDPWTQEHAVTALLNLSLHDQN 258
Query: 274 CKSVASEKGALVLLSSMTGNLELPALSNLADEVFKKMERIEEIVQPLAAAGRFEPLINRL 333
K+V + GA+ L + + N A + + +EE + A G PL++ L
Sbjct: 259 -KAVIAAGGAIKSLVWVLKTGTETSKQNAACALLS-LALLEENKGSIGACGAIPPLVSLL 316
Query: 334 CQGSDNVQIEMAFLVGKL-TLTNSCKEHIARQCAKVLVELLSKPA-GRAA-SLKALYNLS 390
GS + + + KL TL + + + K LV+L+++ G A ++ L +L+
Sbjct: 317 LNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMAEKAMVVLSSLA 376
Query: 391 GLDDNATILVDSALLPALTDILFKSHDASPELKELAAATIANVVSN 436
+DD +V+ + AL + + D S + KE A T+ + S+
Sbjct: 377 AIDDGKEAIVEEGGIAALVEAI---EDGSVKGKEFAILTLLQLCSD 419
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 130 (50.8 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 73 PFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELK 132
P F+CP++++VM+EP V YE +++ W L++G + T P+T L L
Sbjct: 497 PPSYFICPISQEVMREPRVAADGFTYEAESLREW----LDNGHE-TSPMTNLKLAHNNLV 551
Query: 133 PNIGLAGAIEEWVNRN 148
PN L AI+EW+ RN
Sbjct: 552 PNHALRSAIQEWLQRN 567
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 129 (50.5 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 27/68 (39%), Positives = 40/68 (58%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
FLCP+T+++MK+PV+ +YER+AIE W ++ T P+T L++ L PN
Sbjct: 421 FLCPITREIMKDPVIAADGYSYEREAIEAWIST-----KNRTSPMTNLPLQTTLLTPNRT 475
Query: 137 LAGAIEEW 144
L AI W
Sbjct: 476 LKMAIFRW 483
>TAIR|locus:2132238 [details] [associations]
symbol:MOS6 "MODIFIER OF SNC1, 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=ISS] [GO:0008565 "protein transporter
activity" evidence=IEA;ISS] [GO:0006952 "defense response"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=RCA] [GO:0009407 "toxin catabolic
process" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000225
InterPro:IPR002652 InterPro:IPR016024 InterPro:IPR024931
Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673 PROSITE:PS50176
PROSITE:PS51214 SMART:SM00185 GO:GO:0005829 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
EMBL:AL161493 eggNOG:COG5064 GO:GO:0006606 EMBL:AF001308
HOGENOM:HOG000167616 EMBL:Y09511 EMBL:AF385693 EMBL:AY081725
IPI:IPI00521767 PIR:T01516 RefSeq:NP_192124.1 UniGene:At.5372
ProteinModelPortal:O04294 SMR:O04294 IntAct:O04294 STRING:O04294
PaxDb:O04294 PRIDE:O04294 EnsemblPlants:AT4G02150.1 GeneID:827472
KEGG:ath:AT4G02150 TAIR:At4g02150 InParanoid:O04294 OMA:NDENHAP
PhylomeDB:O04294 ProtClustDB:CLSN2916002 Genevestigator:O04294
GermOnline:AT4G02150 Uniprot:O04294
Length = 531
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 63/233 (27%), Positives = 104/233 (44%)
Query: 215 LRSKALMALLSMAKD-EESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAY 273
L+ +A AL ++A E+ +++E G I L SE +E AV L D
Sbjct: 135 LQFEAAWALTNIASGTSENTNVIIESGAVPIFIQLLSSASEDVREQAVWALGNVAGDSPK 194
Query: 274 CKSVASEKGALV-LLSSMTGNLELPALSN----LADEVFKKMERIEEIVQPLAAAGRFEP 328
C+ + GA+ LLS N +L L N L++ K E QP P
Sbjct: 195 CRDLVLSYGAMTPLLSQFNENTKLSMLRNATWTLSNFCRGKPPPAFEQTQPAL------P 248
Query: 329 LINRLCQGSDN-VQIEMAFLVGKLTLTNSCKEHIARQCAKV--LVELL--SKPAGRAASL 383
++ RL Q D V + + + L+ ++ K + V L++LL S P+ +L
Sbjct: 249 VLERLVQSMDEEVLTDACWALSYLSDNSNDKIQAVIEAGVVPRLIQLLGHSSPSVLIPAL 308
Query: 384 KALYNLSGLDDNATILV-DSALLPALTDILFKSHDASPELKELAAATIANVVS 435
+ + N+ DD T +V D LP L ++L ++ S +K+ A TI+N+ +
Sbjct: 309 RTIGNIVTGDDLQTQMVLDQQALPCLLNLLKNNYKKS--IKKEACWTISNITA 359
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 130 (50.8 bits), Expect = 0.00015, P = 0.00015
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 76 NFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNI 135
++ CP+ K++M++P + YERKAI+ W ++ PVT LK +L PN
Sbjct: 711 HYYCPILKEIMEDPQIAADGFTYERKAIKEWIQK-----HQDVSPVTKHRLKHSDLTPNH 765
Query: 136 GLAGAIEEWVNRNVEVQVSTVV 157
L AI EW +R+ + +ST +
Sbjct: 766 TLRSAIREWRSRS-RLDLSTTL 786
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
F+CP++ +VMK+P + YE +AI W L+ G + T P+T L +L PN+
Sbjct: 329 FICPISLEVMKDPQLAADGFTYEAEAISTW----LQGGHE-TSPMTNTKLHHTKLVPNLA 383
Query: 137 LAGAIEEWVN 146
L AI+EW++
Sbjct: 384 LRSAIQEWLH 393
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
FLCP+T+++MK+PV+ +YE++A+E W + + R + P+T L SL L PN
Sbjct: 408 FLCPITRELMKDPVIAADGYSYEKEAMENW----ISNNRRSS-PMTNLPLPSLVLTPNRT 462
Query: 137 LAGAIEEWV 145
L AI W+
Sbjct: 463 LKMAISRWL 471
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 128 (50.1 bits), Expect = 0.00024, P = 0.00024
Identities = 35/108 (32%), Positives = 54/108 (50%)
Query: 37 RRILTSLQRILDTWSVVPDVAALNWDSELEEDCHILPFKNFLCPLTKQVMKEPVVLESAQ 96
+ IL L+R+ + S+ ++ A N L + H P +F CP+TK VM+ P V
Sbjct: 694 KEILPVLERLKEVASIARNMFADN----LIDHHHNAP-THFYCPITKDVMENPCVASDGY 748
Query: 97 AYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIGLAGAIEEW 144
YE++AI+ W ++ + P+T S L PN L AI+EW
Sbjct: 749 TYEKRAIKEWLQK------NHKSPMTDLPFPSDSLLPNHSLLSAIKEW 790
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 88 (36.0 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFER-CLEDGRDPTCPVTGQVLKSLELKPNI 135
FLCP+T +M +PVV+ S Q +ER +++ + D D T P V+ PN+
Sbjct: 35 FLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLSTVI------PNL 88
Query: 136 GLAGAIEEWVNR 147
+ I W +R
Sbjct: 89 AMKSTIFSWCDR 100
Score = 82 (33.9 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 38/145 (26%), Positives = 59/145 (40%)
Query: 153 VSTVVETLRKENPEVDGLDKALDIVFKISEEHPSNRYRVRNAGXXXXXXXXXXXXXXXXG 212
V ++ LR E D AL + + +S PSNR R+ AG
Sbjct: 360 VEPLLHALRSSESERARQDAALAL-YHLSLI-PSNRTRLVRAGAVPTLLSMVRSGDST-- 415
Query: 213 TILRSKALMALLSMAKDEESKKIMLEEGVTKSVIHSLI----GNSEKEKEYAVKLLLEFC 268
S+ L+ L ++A + K ML+ ++ L G+SE +E V +LL C
Sbjct: 416 ----SRILLVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLC 471
Query: 269 IDEAYCKSVASEKGALVLLSSMTGN 293
+ +ASE GA +L + N
Sbjct: 472 QGNLRFRGLASEAGAEEVLMEVEEN 496
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 123 (48.4 bits), Expect = 0.00084, P = 0.00084
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 76 NFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNI 135
++ CP+ +++M+EP + YERKAI W E+ PVT Q L +L PN
Sbjct: 728 HYFCPILREIMEEPEIAADGFTYERKAILAWLEK------HNISPVTRQKLDHFKLTPNH 781
Query: 136 GLAGAIEEWVNRNVEVQVSTVV 157
L AI +W +R V+ S VV
Sbjct: 782 TLRSAIRDWKSR---VRFSNVV 800
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 123 (48.4 bits), Expect = 0.00089, P = 0.00089
Identities = 30/72 (41%), Positives = 35/72 (48%)
Query: 73 PFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELK 132
P +F+CPL K VM EP V Y+R AIE W + T P+T L S L
Sbjct: 766 PPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKE------HNTSPMTDSPLHSKNLL 819
Query: 133 PNIGLAGAIEEW 144
PN L AI EW
Sbjct: 820 PNYTLYTAIMEW 831
>TAIR|locus:505006475 [details] [associations]
symbol:IMPA-2 "importin alpha isoform 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA;ISS] [GO:0006886 "intracellular
protein transport" evidence=ISS] [GO:0008565 "protein transporter
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0009407 "toxin catabolic process" evidence=RCA]
InterPro:IPR000225 InterPro:IPR002652 InterPro:IPR016024
InterPro:IPR024931 Pfam:PF00514 Pfam:PF01749 PIRSF:PIRSF005673
PROSITE:PS50176 PROSITE:PS51214 SMART:SM00185
EnsemblPlants:AT4G16143.1 GO:GO:0005829 GO:GO:0009506 EMBL:CP002687
SUPFAM:SSF48371 GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0006606 OMA:MQTKTVI IPI:IPI00534241
RefSeq:NP_001154239.1 RefSeq:NP_567485.4 UniGene:At.21119
ProteinModelPortal:F4JL11 SMR:F4JL11 PRIDE:F4JL11
EnsemblPlants:AT4G16143.2 GeneID:827302 KEGG:ath:AT4G16143
Uniprot:F4JL11
Length = 535
Score = 119 (46.9 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 60/230 (26%), Positives = 103/230 (44%)
Query: 215 LRSKALMALLSMAKD-EESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAY 273
L+ +A AL ++A E+ K+++E G + L S+ +E AV L D
Sbjct: 137 LQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVREQAVWALGNVAGDSPR 196
Query: 274 CKSVASEKGALV-LLSSMTGNLELPALSNLADEVFKKMERIEEIVQPLAAAGRFEPLINR 332
C+ + +GAL+ LLS + + +L L N A R + P P + R
Sbjct: 197 CRDLVLGQGALIPLLSQLNEHAKLSMLRN-ATWTLSNFCRGKP-QPPFDQVRPALPALER 254
Query: 333 LCQGSDN-VQIEMAFLVGKLTLTNSCKEHIARQCAKV--LVELLS--KPAGRAASLKALY 387
L +D V + + + L+ + K + V LVELL P+ +L+++
Sbjct: 255 LIHSTDEEVLTDACWALSYLSDGTNDKIQSVIEAGVVPRLVELLQHQSPSVLIPALRSIG 314
Query: 388 NLSGLDDNAT--ILVDSALLPALTDILFKSHDASPELKELAAATIANVVS 435
N+ DD T ++ ALL +L +L +H S +K+ A TI+N+ +
Sbjct: 315 NIVTGDDLQTQCVISHGALL-SLLSLLTHNHKKS--IKKEACWTISNITA 361
Score = 48 (22.0 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 722 LLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLI 754
+++ +KPL DLL D + +E L ++
Sbjct: 413 MVEQGVVKPLCDLLVCPDPRIITVCLEGLENIL 445
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 859 817 0.0010 121 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 58
No. of states in DFA: 627 (67 KB)
Total size of DFA: 382 KB (2187 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 71.04u 0.10s 71.14t Elapsed: 00:00:03
Total cpu time: 71.05u 0.11s 71.16t Elapsed: 00:00:03
Start: Fri May 10 08:33:44 2013 End: Fri May 10 08:33:47 2013