BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002999
(859 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SFX2|PUB43_ARATH U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43
PE=2 SV=1
Length = 811
Score = 330 bits (845), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 252/792 (31%), Positives = 406/792 (51%), Gaps = 27/792 (3%)
Query: 74 FKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKP 133
++ F+CPLTKQVM PV LE+ Q +ER+AIE WF+ C E+G+ +CP+T + L +L P
Sbjct: 26 YEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSP 85
Query: 134 NIGLAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKALDIVFKISEEHPSNRYRVRN 193
+I L IEEW RN +++ ++L N E + L AL V +I R RV N
Sbjct: 86 SIALRNTIEEWRARNDALKLDIARQSLYLGNAETNIL-LALKNVREICRNIRKIRQRVCN 144
Query: 194 AGVVLLIVKLLKSSSKSVGTILRSKALMAL-LSMAKDEESKKIMLEEGVTKSVIHSLIGN 252
+V LI +LKSSS V R KAL L + + DEESK I+ E ++++ L
Sbjct: 145 PQLVRLITDMLKSSSHEV----RCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQE 200
Query: 253 SEKEKEYAVKLLLEFCIDEAYCKSVASEKGALVLLSSMTGNL-ELPALSNLADEVFKKME 311
K +E AV +L E EA C+ + S GA++LL +T + E + AD+ +E
Sbjct: 201 PSKGREAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENVSTVEKADKTLTNLE 260
Query: 312 RIEEIVQPLAAAGRFEPLINRLCQGSDNVQIEMAFLVGKLTLTNSCKEHIARQCAKVLVE 371
R EE V+ +A GR +PL+ +L +GS ++ MAF +G L L N K +A+ L++
Sbjct: 261 RSEENVRQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLALNNDVKVIVAQTVGSSLID 320
Query: 372 LLSKP--AGRAASLKALYNLSGLDDNATILVDSALLPALT-DILFKSHDASP-ELKELAA 427
L+ + R A+L AL N+S + +A +L+++ +LP L D+ + + P LKE++A
Sbjct: 321 LMRTRDMSQREAALGALNNISSFEGSAKLLINTGILPPLIKDLFYVGPNQLPIRLKEVSA 380
Query: 428 ATIANVVSNPGCWELASADKLGHSMQSESIVSSLLGLLSGVSPQCQVSTLRILCGIASSP 487
+AN+V+ ++ ++ SE IV +LL L S P+ Q L +L G+ S P
Sbjct: 381 TILANIVNIGYDFDKVPVGPHHQTLVSEEIVENLLQLTSNTGPEIQGKLLAVLVGLTSCP 440
Query: 488 QAAESVATHIKSGDGIKYIIQFLE-HPEVEHRTYAFRLTRILSERIGQDLAYALK-PFDK 545
+ +V + I++ I ++QF+E H + R + +L +S + ++LA AL+ +
Sbjct: 441 NSVINVVSAIRNSAAIISLVQFVEIHENDDLRLASIKLLHNISPHMSEELANALRSTVGQ 500
Query: 546 LVLFKDKILDNQSANCERSDAACILANIQLSEEEVKT---LLEATFIKWIVITLQTHKSS 602
L I +N E AA L + V T L E F K I + +
Sbjct: 501 LGSLVSIISENTPTITEEQAAAAGLLAELPERDLVLTMRLLREGAFEKIISKIVGIRQGE 560
Query: 603 FNTRSSRPISNIAEGLLGLLLHFTRSVNPQTLGMVR--EQRLMTIFRDQLSFPSKARVKQ 660
R R EGL+ +L T ++ +T + E+ L ++F D L S+ +++
Sbjct: 561 I--RGIRFERTFLEGLVSILARITFALTKETDATLFCCEKNLPSLFLDLLQSNSQDNIQR 618
Query: 661 LAAHGLKNLSEAGRSLCAEDTGSP--TPRRFCASLVFICGKPPPEPTTCPIHNTPCEDDS 718
+A L+NLS ++L T P P +C S+ KPP C IH C
Sbjct: 619 ASATALENLSLESKNL----TKIPELPPPTYCVSIFSCLSKPPVVLGICKIHQGICSVRE 674
Query: 719 QLCLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFKRGVDELEREGALDAVV 778
CL++ + LVDLL E+ V A+ ALSTL+ D + +GV ++ + ++
Sbjct: 675 SFCLVEGQAVDKLVDLLDHENDKVVGPALAALSTLLED-GLDVVQGVRLIDEADGITPIL 733
Query: 779 DLFTEVRPGLLQERTVWMLERVLRVEGHSHRYSLNQSLVRALVEAFKHGNANAKRHAQEA 838
++ E R L+ R VWM+ER+LR+E + Q++ ALV+AF++ + ++ A++A
Sbjct: 734 NVLLENRTENLRIRAVWMVERILRIEEIAREVGEEQNVTAALVDAFQNADFRTRQIAEKA 793
Query: 839 LTNLKQISGLSG 850
L ++ +I SG
Sbjct: 794 LRHIDKIPNFSG 805
>sp|Q9LM76|PUB44_ARATH U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44
PE=1 SV=1
Length = 801
Score = 322 bits (826), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 247/792 (31%), Positives = 406/792 (51%), Gaps = 37/792 (4%)
Query: 74 FKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKP 133
++ F+CPLTK+VM +PV LE+ + +ER+AIE WF+ C + GR P+CP+T Q L S ++
Sbjct: 24 YEAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSA 83
Query: 134 NIGLAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKALDIVFKISEEHPSNRYRVRN 193
+I L IEEW +RN ++ ++L N E D L +AL V +I SNR+ VRN
Sbjct: 84 SIALRNTIEEWRSRNDAAKLDIARQSLFLGNAETDIL-QALMHVRQICRTIRSNRHGVRN 142
Query: 194 AGVVLLIVKLLKSSSKSVGTILRSKALMAL-LSMAKDEESKKIMLEEGVTKSVIHSLIGN 252
+ ++ +I+ +LKS+S V R KAL L + + D+ESK I+ E ++++ L
Sbjct: 143 SQLIHMIIDMLKSTSHRV----RYKALQTLQVVVEGDDESKAIVAEGDTVRTLVKFLSHE 198
Query: 253 SEKEKEYAVKLLLEFCIDEAYCKSVASEKGALVLLSSMT-GNLELPALSNLADEVFKKME 311
K +E AV LL E EA C+ + S GAL+LL +T N E ++ AD + ME
Sbjct: 199 PSKGREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSENVSIVEKADRTLENME 258
Query: 312 RIEEIVQPLAAAGRFEPLINRLCQGSDNVQIEMAFLVGKLTLTNSCKEHIARQCAKVLVE 371
R EEIV+ +A+ GR +PL+ +L +GS ++ MA +G+L L N K +A+ LV+
Sbjct: 259 RSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDVKVLVAQTVGSSLVD 318
Query: 372 LL--SKPAGRAASLKALYNLSGLDDNATILVDSALLPALT-DILFKSHDASP-ELKELAA 427
L+ R A+LKAL +S + +A +L+ +LP L D+ + + P LKE++A
Sbjct: 319 LMRSGDMPQREAALKALNKISSFEGSAKVLISKGILPPLIKDLFYVGPNNLPIRLKEVSA 378
Query: 428 ATIANVVSNPGCWELASADKLGHSMQSESIVSSLLGLLSGVSPQCQVSTLRILCGIASSP 487
+AN+V N G ++ A ++ SE+ V +LL L+S P Q L +L G+ S P
Sbjct: 379 TILANIV-NIG-YDFDKA-----TLVSENRVENLLHLISNTGPAIQCKLLEVLVGLTSCP 431
Query: 488 QAAESVATHIKSGDGIKYIIQFLEHPEVEH-RTYAFRLTRILSERIGQDLAYAL----KP 542
+ V IK+ I ++QF+E E + R + +L LS + ++LA AL
Sbjct: 432 KTVPKVVYAIKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEELAKALCGTAGQ 491
Query: 543 FDKLVLF---KDKILDNQSANCERSDAACILANIQLSEEEVKTLLEATFIKWIVITLQTH 599
LV K I + Q+A ++ L++E ++ F K I
Sbjct: 492 LGSLVAIISEKTPITEEQAAAAGLLAELPD-RDLGLTQEMLEV---GAFEKIISKVFGIR 547
Query: 600 KSSFNTRSSRPISNIAEGLLGLLLHFTRSVNPQ--TLGMVREQRLMTIFRDQLSFPSKAR 657
+ + + R ++ EGL+ +L T N + + RE + ++F L +
Sbjct: 548 QG--DIKGMRFVNPFLEGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQDN 605
Query: 658 VKQLAAHGLKNLSEAGRSLCAEDTGSPTPRRFCASLVFICGKPPPEPTTCPIHNTPCEDD 717
++ ++A L+NLS S+ P P +C S+ KP C IH C
Sbjct: 606 IQMVSAMALENLSL--ESIKLTRMPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGICSLR 663
Query: 718 SQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFKRGVDELEREGALDAV 777
CL++ ++ LV LL E+ V + A A + +++ + ++GV L+ + +
Sbjct: 664 ETFCLVEGGAVEKLVALLDHENVKV-VEAALAALSSLLEDGLDVEKGVKILDEADGIRHI 722
Query: 778 VDLFTEVRPGLLQERTVWMLERVLRVEGHSHRYSLNQSLVRALVEAFKHGNANAKRHAQE 837
+++ E R L R VWM+ER+LR+E + + QSL ALV+AF++ + ++ A+
Sbjct: 723 LNVLRENRTERLTRRAVWMVERILRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIAEN 782
Query: 838 ALTNLKQISGLS 849
AL ++ +I S
Sbjct: 783 ALKHIDKIPNFS 794
>sp|Q9CAA7|PUB42_ARATH Putative U-box domain-containing protein 42 OS=Arabidopsis thaliana
GN=PUB42 PE=2 SV=1
Length = 1033
Score = 257 bits (656), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 226/877 (25%), Positives = 425/877 (48%), Gaps = 57/877 (6%)
Query: 13 NHNELTEQIKQLKSDLSQSSSVSERRILTSLQRILDTWSVVPDVAALNWDS-------EL 65
NH+E + ++ SQS++VS +R +L + + +PD+ + + ++ L
Sbjct: 170 NHSESQSLVTEIPDIPSQSTNVSSQRKHGNLSKSQSQSTEIPDIPSQSSNASSQRKYGNL 229
Query: 66 EEDCHILP---------FKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRD 116
E +LP ++ F+CPLTK++M++PV E+ ER+A+ WF+ + +
Sbjct: 230 SESLSMLPQVTQFMEPPYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFD-SFGNSDE 288
Query: 117 PTCPVTGQVLKSLELKPNIGLAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKALDI 176
CPVTGQ L + EL N+ L I+EW RN ++ L E +D D+
Sbjct: 289 INCPVTGQKLTT-ELSANVVLKTIIQEWKVRNEAARIKVAHAALSLGGSESMVIDALRDL 347
Query: 177 VFKISEEHPSNRYRVRNAGVVLLIVKLLKSSSKSVGTILRSKALMALLSMAKDE-ESKKI 235
E N+ +VR AG++ L+ + L SK V R + L L ++A +E + K
Sbjct: 348 QMTC-EGKEYNKVQVREAGIIQLLDRYLTYRSKDV----RFELLKFLRTLADEETDDGKE 402
Query: 236 MLEEGVTKSVIHSLIGNSEKEKEYAVK-LLLEFCIDEAYCKSVASEKGALVLLSSMTGNL 294
M+ + +T S + L+G+S + +A + LLLE + C+ + + +GA+++L + N
Sbjct: 403 MIVKTITMSCVIKLLGSSHQPVRHAAQALLLELSKSQHACEKIGTARGAILMLVTAKYNR 462
Query: 295 ELPAL-SNLADEVFKKMERIEEIVQPLAAAGRFEPLINRLCQGSDNVQIEMAFLVGKLTL 353
EL + S +D++ + +E+ E ++ +A +G EPL+ L +GS+ Q+ MA + ++ +
Sbjct: 463 ELDSFASETSDQILRNLEKCPENIKQMAESGLLEPLLGHLAEGSEETQVAMAAYLVEIDI 522
Query: 354 TNSCKEHIARQCAKVLVELLSKPA--GRAASLKALYNLSGLDDNATILVDSALLPALTDI 411
+ K ++A + L+ L+ R A+ KAL ++S N ILV+ ++ + +
Sbjct: 523 GHEKKTYVAEKACPALIGLVQSENIDARRAAFKALAHISLYHPNNKILVEVGIIKIMVEE 582
Query: 412 LFKSHDASPEL--KELAAATIANVVSNPGCWELASADKLGHSMQSESIVSSLLGLLSGVS 469
+F S + + AA +AN++ + E + GH++ S+ V +++ +L S
Sbjct: 583 MFTKRVFSDLMNSRNEAATILANILESGLEHETFEVNTHGHTLGSDYFVYNIIHMLKNSS 642
Query: 470 P-QCQVSTLRILCGIASSPQAAESVATHIKSGDGIKYIIQFLEHPEVEHRTYAFRLTRIL 528
P + +RIL ++ SP+A ++ + IK D +I+ + +P E A +L L
Sbjct: 643 PDDLNIDLIRILLSLSKSPRAMATIVSVIKETDASFAMIELINNPHDELGVGALKLLIAL 702
Query: 529 SERIGQDLAYAL-----KPFDKLVLFKDKILDNQSANCERSDAACILANIQLSEEEVK-T 582
+ IG L+ L +P + L + + NQ + + +A +LA + +
Sbjct: 703 TPYIGHTLSERLCKTRGQPEN---LIQCPVEANQITE-KHAVSAKLLAKLPHQNLTLNLA 758
Query: 583 LLEATFIKWIVITLQTHKSSFNTRSSRPISNIAEGLLGLLLHFTRSV-NPQTLGMVREQR 641
L+ + + I+ + + S R+SR ++ EGL+G+L+ FT ++ PQ + + R
Sbjct: 759 LVNESIVSEILHAIHLIQRS-GARTSRYATDFLEGLVGILVRFTTTLYEPQMMYLARNHD 817
Query: 642 LMTIFRDQLSFPSKARVKQLAAHGLKNLSEAGRSLCAEDTGSPTPR--RFCASLVF---- 695
L ++F D L S V++L+A GL+NLS +L + P PR +F SL
Sbjct: 818 LTSVFVDLLMKTSSDEVQRLSATGLENLSSTTMTL----SRPPQPRSTKFMGSLSMPRSF 873
Query: 696 -ICGKPPPEPTTCPIHNTPCEDDSQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLI 754
+ + C IH C + CL+++N I L+ L + V +A+ A+ TL
Sbjct: 874 SLRSSKKKQIEICAIHRGVCSAKNTFCLVEANAITKLLACLQSDKVEVVESALAAICTL- 932
Query: 755 IDTSKNFKRGVDELEREGALDAVVDLFTEVRPGLLQERTVWMLERVLRVEGHSHRYSLNQ 814
+D ++ + L A+ +++ E + L ++ WM+++ + G + ++Q
Sbjct: 933 LDDKVEVEKSLSMLSEMNAVQLILNAVKEHKKESLLQKAFWMIDKFIIRGGDKYASEISQ 992
Query: 815 S--LVRALVEAFKHGNANAKRHAQEALTNLKQISGLS 849
L LV AF G+ N ++ A+ L L ++ S
Sbjct: 993 DRMLSGMLVSAFHRGDGNTRQMAENILRRLDKMPSFS 1029
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 112/218 (51%), Gaps = 29/218 (13%)
Query: 71 ILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLE 130
ILP + FLCP+T ++M +PV++ + Q YE+++I+ WF D TCP T Q L L
Sbjct: 289 ILPHE-FLCPITLEIMLDPVIIATGQTYEKESIQKWF-----DAGHKTCPKTRQELDHLS 342
Query: 131 LKPNIGLAGAIEEWVNRN------VEV----------QVSTVVETLRKENPEVDGLDKAL 174
L PN L I +W +N EV +VS +VE L + +++ +++
Sbjct: 343 LAPNFALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEAL--SSSQLEEQRRSV 400
Query: 175 DIVFKISEEHPSNRYRVRNAGVVLLIVKLLKSSSKSVGTILRSKALMALLSMAKDEESKK 234
+ ++ E+P NR + NAG + L+V+LL + + A+ LL+++ DE +KK
Sbjct: 401 KQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGI----QENAVTTLLNLSIDEVNKK 456
Query: 235 IMLEEGVTKSVIHSL-IGNSEKEKEYAVKLLLEFCIDE 271
++ EG ++I L GN E + A L +DE
Sbjct: 457 LISNEGAIPNIIEILENGNREARENSAAALFSLSMLDE 494
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 160/381 (41%), Gaps = 52/381 (13%)
Query: 71 ILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLE 130
I+P F CP++ ++M++PV++ S Q YER I+ W D TCP T Q L
Sbjct: 227 IIP-DEFRCPISLELMQDPVIVSSGQTYERSCIQKWL-----DSGHKTCPKTQQPLSHTS 280
Query: 131 LKPNIGLAGAIEEWVNRN-VEVQVSTVVETLRKENPEVDGLDKALDIVFKISEEHPSNRY 189
L PN L I +W N +E+ + K+N K+ D +H
Sbjct: 281 LTPNFVLKSLISQWCEANGIELPKN-------KQNSRDKKAAKSSDY------DH----- 322
Query: 190 RVRNAGVVLLIVKLLKSSSKSVGTILRSKALMALLSMAKDEESKKIMLEEGVTKSVIHSL 249
AG+V L+ +L + R+ A L ++ ++ + E G +++ L
Sbjct: 323 ----AGLVSLMNRLRSGNQDEQ----RAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLL 374
Query: 250 IGNSEKEKEYAVKLLLEFCIDEAYCKSVASEKGALVLLSSM-TGNLELPALSNLADEVFK 308
+ + +E+AV LL I E S+ ++ + TG++E N A +F
Sbjct: 375 SSSDPRTQEHAVTALLNLSIHENNKASIVDSHAIPKIVEVLKTGSME--TRENAAATLF- 431
Query: 309 KMERIEEIVQPLAAAGRFEPLINRLCQGSDNVQIEMAFLVGKLTLTNSCKEHIARQCAKV 368
+ ++E + AAG PLIN LC GS + + A + L + K + +
Sbjct: 432 SLSVVDENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVI 491
Query: 369 -LVELLSKPAGRA--ASLKALYNLSGLDDNATILVDSALLPALTDILFKSHDASPELKEL 425
L+ L P G +L L L+G + ++ S +P L +++ SP +E
Sbjct: 492 HLMNFLVDPTGGMIDEALSLLSILAGNPEGKIVIARSEPIPPLVEVI---KTGSPRNREN 548
Query: 426 AAATIANVVSNPGCWELASAD 446
AAA + W L SAD
Sbjct: 549 AAAIL---------WLLCSAD 560
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 180/435 (41%), Gaps = 70/435 (16%)
Query: 39 ILTSLQRILDTWSVVPDVAALNWDSEL----EEDCHIL-PFKNFLCPLTKQVMKEPVVLE 93
+L ++ + T++ D A L S L ++D +L P + F CP++ ++M +PV++
Sbjct: 217 VLKKIKDFVQTYNPNLDDAPLRLKSSLPKSRDDDRDMLIPPEEFRCPISLELMTDPVIVS 276
Query: 94 SAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIGLAGAIEEWVNRNVEVQV 153
S Q YER+ I+ W E G TCP T + L S + PN L I +W N
Sbjct: 277 SGQTYERECIKKWLE-----GGHLTCPKTQETLTSDIMTPNYVLRSLIAQWCESNG---- 327
Query: 154 STVVETLRKENPEV-------------DGLDKALDIVFKISEEHPSNRYRVRNAGVVLLI 200
+E ++ N D +K +++ K++ + P +R AG + L
Sbjct: 328 ---IEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDRRSA--AGEIRL- 381
Query: 201 VKLLKSSSKSVGTILRSKALMALLSMAKDEESKKIMLEEGVTKSVIHSLIGNSEKEKEYA 260
L K ++ + I S A+ L+++ I N + +E+A
Sbjct: 382 --LAKQNNHNRVAIAASGAIPLLVNLLT---------------------ISNDSRTQEHA 418
Query: 261 VKLLLEFCIDEAYCKSVASEKGALVLLSSMTGNLELPALSNLADEVFKKMERIEEIVQPL 320
V +L I + + GA+ + + + A N A +F + I+E +
Sbjct: 419 VTSILNLSICQENKGKIVYSSGAVPGIVHVLQKGSMEARENAAATLFS-LSVIDENKVTI 477
Query: 321 AAAGRFEPLINRLCQGSDNVQIEMAFLVGKLTLTNSCKEHIARQ-CAKVLVELLSKPAGR 379
AAG PL+ L +GS + + A + L + K R VL+ LL++P
Sbjct: 478 GAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESG 537
Query: 380 AA--SLKALYNLSGLDDNATILVDSALLPALTDILFKSHDASPELKELAAATIANVVSNP 437
SL L LS D + + + +P L D + SP KE +AA + ++ S
Sbjct: 538 MVDESLSILAILSSHPDGKSEVGAADAVPVLVDFI---RSGSPRNKENSAAVLVHLCS-- 592
Query: 438 GCW---ELASADKLG 449
W L A KLG
Sbjct: 593 --WNQQHLIEAQKLG 605
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 38/258 (14%)
Query: 60 NWDSELEEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTC 119
N D + D +P +FLCP++ ++MK+PV++ + Q YER I+ W D + TC
Sbjct: 229 NTDESKKSDKLTIPV-DFLCPVSLELMKDPVIVATGQTYERAYIQRWI-----DCGNLTC 282
Query: 120 PVTGQVLKSLELKPNIGLAGAIEEW-VNRNVEVQVS------------TVVETL--RKEN 164
P T Q L++ L PN L I W N+E +V+ L R +
Sbjct: 283 PKTQQKLENFTLTPNYVLRSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSS 342
Query: 165 PEVDGLDKALDIVFKISEEHPSNRYRVRNAGVVLLIVKLLKSSSKSVGTILRSKALMALL 224
+ A+ + +S+ NR + AG + ++V LL +S+ V T + A+ +L
Sbjct: 343 RSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLL--TSEDVAT--QENAITCVL 398
Query: 225 SMAKDEESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAYCKSVASEKGAL 284
+++ E +K++++ G S++ L + + +E A L S+A E +
Sbjct: 399 NLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSL--------SLADENKII 450
Query: 285 VLLSSMTGNLELPALSNL 302
+ G+ +PAL +L
Sbjct: 451 I-----GGSGAIPALVDL 463
Score = 35.4 bits (80), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 163 ENPEVDGLDKALDIVFKISEEHPSNRYRVRNAGVVLLIVKLLKSSSKSVGTILRSKALMA 222
EN G A +F + H N+ R AG+V +VK+L S++ + +AL
Sbjct: 465 ENGTPRGKKDAATALFNLCIYH-GNKGRAVRAGIVTALVKMLSDSTRHR---MVDEALTI 520
Query: 223 LLSMAKDEESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAYCKSVASEKG 282
L +A ++++K +++ ++I L + + +E A +LL C + G
Sbjct: 521 LSVLANNQDAKSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKLITIGRLG 580
Query: 283 ALVLLSSMTGN 293
A+V L ++ N
Sbjct: 581 AVVPLMDLSKN 591
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 164/389 (42%), Gaps = 62/389 (15%)
Query: 76 NFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNI 135
+F CP++ ++M++PV++ S Q YER IE W E G TCP T Q L S L PN
Sbjct: 259 DFRCPISLEMMRDPVIVSSGQTYERTCIEKWIE-----GGHSTCPKTQQALTSTTLTPNY 313
Query: 136 GLAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGL------DKALDIVFKISEEHPSNRY 189
L I +W N +++ +LR +V +K D++++++ +P ++
Sbjct: 314 VLRSLIAQWCEAN-DIEPPKPPSSLRPR--KVSSFSSPAEANKIEDLMWRLAYGNPEDQR 370
Query: 190 RVRNAGVVLLIVKLLKSSSKSVGTILRSKALMALLSMAKDEESKKIMLEEGVTKSVIHSL 249
AG + L+ K ++ +++ + E G ++ L
Sbjct: 371 SA--AGEIRLLAK-------------------------RNADNRVAIAEAGAIPLLVGLL 403
Query: 250 IGNSEKEKEYAVKLLLEFCIDEAYCKSVASEKGALVLLSSMTGNLE------LPALSNLA 303
+ +E++V LL I E + KGA+V ++ G ++ + A N A
Sbjct: 404 STPDSRIQEHSVTALLNLSICE-------NNKGAIVSAGAIPGIVQVLKKGSMEARENAA 456
Query: 304 DEVFKKMERIEEIVQPLAAAGRFEPLINRLCQGSDNVQIEMAFLVGKLTLTNSCKEHIAR 363
+F + I+E + A G PL+ L +G+ + + A + L + K R
Sbjct: 457 ATLF-SLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIR 515
Query: 364 QCA-KVLVELLSKPAGRAA--SLKALYNLSGLDDNATILVDSALLPALTDILFKSHDASP 420
L LL++P +L L LS + I+ S +P+L + + SP
Sbjct: 516 AGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFI---RTGSP 572
Query: 421 ELKELAAATIANVVSNPGCWELASADKLG 449
+E AAA + ++ S L A KLG
Sbjct: 573 RNRENAAAVLVHLCSG-DPQHLVEAQKLG 600
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 35/252 (13%)
Query: 60 NWDSELEEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTC 119
N D + D +P ++FLCP++ ++MK+P ++ + Q YER I+ W D + +C
Sbjct: 231 NSDDSQKSDNLTIP-EDFLCPISLELMKDPAIVSTGQTYERSFIQRWI-----DCGNLSC 284
Query: 120 PVTGQVLKSLELKPNIGLAGAIEEWVNR-NVEV-----------------QVSTVVETLR 161
P T Q L++ L PN L I +W + N+E +S + +R
Sbjct: 285 PKTQQKLENFTLTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIR 344
Query: 162 K-----ENPEVDGLDKALDIVFKISEEHPSNRYRVRNAGVVLLIVKLLKSSSKSVGTILR 216
+ ++ A+ + +S+ NR + AG + ++VKLL S T +
Sbjct: 345 ALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGD---TETQ 401
Query: 217 SKALMALLSMAKDEESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCI-DEAYCK 275
A+ +L+++ E +K++++ G S++ L S + +E A L + DE K
Sbjct: 402 ENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADEN--K 459
Query: 276 SVASEKGALVLL 287
+ GA++ L
Sbjct: 460 IIIGASGAIMAL 471
>sp|Q9LU47|PUB53_ARATH Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana
GN=PUB53 PE=3 SV=1
Length = 819
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 73 PFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELK 132
P +F CPL K VMKEP + Y+R+AIE W +E+ R T PVT L+++ L
Sbjct: 749 PPSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEW----MENHR--TSPVTNSPLQNVNLL 802
Query: 133 PNIGLAGAIEEWVNRN 148
PN L AI EW NRN
Sbjct: 803 PNHTLYAAIVEWRNRN 818
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 136/349 (38%), Gaps = 69/349 (19%)
Query: 68 DCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLK 127
D I K+F+CP++ +M +PV++ + Q Y+R +I W +E+G TCP TGQ+L
Sbjct: 300 DTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARW----IEEGH-CTCPKTGQMLM 354
Query: 128 SLELKPNIGLAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKALDIVFKISEEHPSN 187
+ PN L I +W + E+ D +++ + P+
Sbjct: 355 DSRIVPNRALKNLIVQWC----------TASGISYESEFTDSPNESF------ASALPTK 398
Query: 188 RYRVRNAGVVLLIVKLLKSSSKSVGTI-LRSKALMALLSMAKDEESKKIMLEEGVTKSVI 246
N V +++K L S++ T+ R L+A +E++ + E G +
Sbjct: 399 AAVEANKATVSILIKYLADGSQAAQTVAAREIRLLA----KTGKENRAYIAEAGAIPHLC 454
Query: 247 HSLIGNSEKEKEYAVKLLLEFCIDEAYCKSVASEKGAL-VLLSSMTGNLELPALSNLADE 305
L + +E +V +L I E + E L ++S + L + A N A
Sbjct: 455 RLLTSENAIAQENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAAT 514
Query: 306 VFKKMERIEEIVQPLAAAGRFEPLINRLCQGSDNVQIEMAFLVGKLTLTNSCKEHIARQC 365
+F L+A ++ I I QC
Sbjct: 515 LFS-----------LSAVHEYKKRI-----------------------------AIVDQC 534
Query: 366 AKVLVELL--SKPAGRAASLKALYNLSGLDDNATILVDSALLPALTDIL 412
+ L LL P G+ ++ ALYNLS DN + +++ + +L L
Sbjct: 535 VEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGAL 583
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 110/255 (43%), Gaps = 58/255 (22%)
Query: 75 KNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPN 134
K F CP++ +M++PVV + Q Y+R +I W +E+G TCP +GQ L L PN
Sbjct: 299 KEFSCPISLDLMRDPVVASTGQTYDRPSIIQW----IEEGHS-TCPNSGQTLADHRLVPN 353
Query: 135 IGLAGAIEEWVNRNVEVQVSTVVETLRKENPEV--------------------------- 167
L I +W V L+ ++PE
Sbjct: 354 RALRSLISQWCG----------VYGLQYDSPESNEGMAECVAASCSSRAAMEANKATARI 403
Query: 168 ------DGLDKALDIVFK----ISEEHPSNRYRVRNAGVVLLIVKLLKSSSKSVGTILRS 217
DG + + K +++ NR + + G + L+ +LL S+ + +
Sbjct: 404 LVRMLEDGSENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSND----WMAQE 459
Query: 218 KALMALLSMAKDEESK-KIMLEEGVTKSVIHSLI-GNSEKEKEYAVKLLLEFCIDEAYCK 275
A+ ALL+++ E +K +IM +EG + ++ L G + + KE A L + + K
Sbjct: 460 NAVTALLNLSIFEPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKK 519
Query: 276 SVASEKGALVLLSSM 290
+ +E GA+ L+SM
Sbjct: 520 LIMNEPGAVEELASM 534
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 65 LEEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQ 124
++E+ I PF FLCP++ ++MK+PV++ + Y+R +IE W L G+ +CPVT Q
Sbjct: 6 MDEEIEIPPF--FLCPISLEIMKDPVIVSTGITYDRDSIEKW----LFAGKKNSCPVTKQ 59
Query: 125 VLKSLELKPNIGLAGAIEEWVNRNVEVQV------------STVVETLRKENPEVDGLDK 172
+ +L PN L I+ W N V S + + +R + K
Sbjct: 60 DITDADLTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVK 119
Query: 173 ALDIVFKISEEHPSNRYRVRNAGVVLLIVKLLKSSSKS 210
L + +I E+ +N+ + AGV + ++ + S++
Sbjct: 120 CLKRLRQIVSENATNKRCLEAAGVPEFLANIVSNDSEN 157
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 72 LPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLEL 131
+P + CP++ Q+M +PV++ S Q YER IE WF DG + +CP T Q L L L
Sbjct: 274 IPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWF----SDGHN-SCPKTQQQLPHLSL 328
Query: 132 KPNIGLAGAIEEWVNRN 148
PN + G I W +N
Sbjct: 329 TPNYCVKGLIASWCEQN 345
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
F CP++ VMK PV L + Y+R +I+ W DG + TCP T Q+L++ + PN
Sbjct: 14 FRCPISLDVMKSPVSLCTGVTYDRASIQRWL-----DGGNNTCPATMQILQNKDFIPNRT 68
Query: 137 LAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKALDIVFKISEEHPSNR 188
L IE W + V+ T VE+ P D + A+D V KI +E +R
Sbjct: 69 LQRLIEIWSD---SVRRRTCVESAELAAPTRDEIADAIDRV-KIEKEERDDR 116
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 113/259 (43%), Gaps = 32/259 (12%)
Query: 54 PDVAALNWDSELEEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLED 113
P +A+ DS + +P F CP++ ++MK+PV++ + Q YER IE W +
Sbjct: 255 PPMASRVLDSNGDSRPITIP-DEFRCPISLELMKDPVIVSTGQTYERACIEKW----IAS 309
Query: 114 GRDPTCPVTGQVLKSLELKPNIGLAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKA 173
G TCP T Q + + L PN L I +W N ++ K P ++A
Sbjct: 310 GHH-TCPTTQQKMSTSALTPNYVLRSLISQWCETN-GMEPPKRSTQPNKPTPACSSSERA 367
Query: 174 -LDIVFK-------------------ISEEHPSNRYRVRNAGVVLLIVKLLKSSSKSVGT 213
+D + +++ + +NR + AG + L++ LL SS
Sbjct: 368 NIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRT-- 425
Query: 214 ILRSKALMALLSMAKDEESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAY 273
+ A+ ALL+++ E++K ++ G S++H L S + +E A L + + Y
Sbjct: 426 --QEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEY 483
Query: 274 CKSVASEKGALVLLSSMTG 292
K GA+ L + G
Sbjct: 484 -KVTIGGMGAIPALVVLLG 501
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 113/259 (43%), Gaps = 32/259 (12%)
Query: 54 PDVAALNWDSELEEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLED 113
P +A+ DS + +P F CP++ ++MK+PV++ + Q YER IE W +
Sbjct: 255 PPMASRVLDSNGDSRPITIP-DEFRCPISLELMKDPVIVSTGQTYERACIEKW----IAS 309
Query: 114 GRDPTCPVTGQVLKSLELKPNIGLAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKA 173
G TCP T Q + + L PN L I +W N ++ K P ++A
Sbjct: 310 GHH-TCPTTQQKMSTSALTPNYVLRSLISQWCETN-GMEPPKRSTQPNKPTPACSSSERA 367
Query: 174 -LDIVFK-------------------ISEEHPSNRYRVRNAGVVLLIVKLLKSSSKSVGT 213
+D + +++ + +NR + AG + L++ LL SS
Sbjct: 368 NIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRT-- 425
Query: 214 ILRSKALMALLSMAKDEESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAY 273
+ A+ ALL+++ E++K ++ G S++H L S + +E A L + + Y
Sbjct: 426 --QEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEY 483
Query: 274 CKSVASEKGALVLLSSMTG 292
K GA+ L + G
Sbjct: 484 -KVTIGGMGAIPALVVLLG 501
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
FLCP++ +MK+PV++ + Y+R++IE W L G+ +CPVT QV+ +L PN
Sbjct: 11 FLCPISLDIMKDPVIVSTGITYDRESIEKW----LFSGKKNSCPVTKQVITETDLTPNHT 66
Query: 137 LAGAIEEWVNRN 148
L I+ W N
Sbjct: 67 LRRLIQSWCTLN 78
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 76 NFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNI 135
+F CP+T ++M++PVV+ + Q Y+R++I+ W ++ G + TCP TGQVLK L PN
Sbjct: 277 DFRCPITLELMRDPVVVATGQTYDRESIDLW----IQSGHN-TCPKTGQVLKHTSLVPNR 331
Query: 136 GLAGAIEEW 144
L I W
Sbjct: 332 ALKNLIVLW 340
Score = 35.8 bits (81), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Query: 718 SQLCLLKSNCIKPLVDLLAEEDTNVEIAAVEALSTLIIDTSKNFKRGVDELEREGALDAV 777
++ C+ ++ I LV LA E +++I AV T I++ S + +E +GAL+ V
Sbjct: 401 ARACIAEAGAIPKLVRYLATECPSLQINAV----TTILNLSILEQNKTRIMETDGALNGV 456
Query: 778 VDLFTEVRPGLLQERTVWMLERVLRVEGHSHRYSLNQSLVRALVEAFKHGNANAKRHAQE 837
+++ + L + V + R +V LV+ K G ++KR A
Sbjct: 457 IEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSKRDALV 516
Query: 838 ALTNL 842
A+ NL
Sbjct: 517 AILNL 521
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 72 LPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLEL 131
LP K F C L++ VM +PV++ S +ER I+ WF ++G D +CP++ + L L
Sbjct: 219 LPEK-FKCTLSRTVMYDPVIISSGNTFERMQIQKWF----DEGND-SCPISKRKLDDFTL 272
Query: 132 KPNIGLAGAIEEWVNRN 148
KPN+ L I EW +N
Sbjct: 273 KPNVELKSQISEWCAKN 289
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 72 LPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLEL 131
+P + CP++ Q+M +PV++ S Q YER IE WF DG + TCP T Q L + L
Sbjct: 271 VPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWF----SDGHN-TCPKTQQQLPHISL 325
Query: 132 KPNIGLAGAIEEWVNRN 148
PN + G I W +N
Sbjct: 326 TPNNCVKGLIASWCEQN 342
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 73 PFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLEL- 131
P K+F+CP+T Q+ +PV LE+ Q YERKAI+ W L G + TCP+T Q L + L
Sbjct: 513 PPKDFVCPITGQIFSDPVTLETGQTYERKAIQEW----LGTG-NTTCPITRQALSANILP 567
Query: 132 KPNIGLAGAIEEWVNRNVEV 151
K N L I W +N E+
Sbjct: 568 KTNYVLKRLIVSWKEQNPEL 587
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 72 LPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLEL 131
+P + CP++ Q+M +PV++ S Q YER IE WF DG + TCP T Q L L L
Sbjct: 278 VPPEELRCPISLQLMYDPVIIASGQTYERICIEKWF----SDGHN-TCPKTHQQLSHLCL 332
Query: 132 KPNIGLAGAIEEWVNRN 148
PN + I W +N
Sbjct: 333 TPNYCVKALISSWCEQN 349
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 73 PFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLK-SLEL 131
P K+F+CP+T Q+ +PV LE+ Q YERKAI+ W L G + TCP+T Q L S+
Sbjct: 511 PPKDFVCPITGQIFCDPVTLETGQTYERKAIQEW----LRTG-NTTCPITRQPLSASILP 565
Query: 132 KPNIGLAGAIEEWVNRNVEV 151
K N L I W +N E+
Sbjct: 566 KTNYVLKRLITSWKEQNPEL 585
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 73 PFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLK-SLEL 131
P K+F+CP+T Q+ +PV LE+ Q YERKAI+ W L G + TCP+T Q L S+
Sbjct: 511 PPKDFVCPITGQIFCDPVTLETGQTYERKAIQEW----LRTG-NTTCPITRQPLSASILP 565
Query: 132 KPNIGLAGAIEEWVNRNVEV 151
K N L I W +N E+
Sbjct: 566 KTNYVLKRLITSWKEQNPEL 585
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 67 EDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVL 126
E+ I F CP++ ++MK+PV++ S Y+R+ IE WFE + TCPVT VL
Sbjct: 27 EEVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQ-----TCPVTNTVL 81
Query: 127 KSLELKPNIGLAGAIEEW 144
SLE PN + I+ W
Sbjct: 82 TSLEQIPNHTIRRMIQGW 99
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 169/409 (41%), Gaps = 73/409 (17%)
Query: 69 CHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKS 128
C + +F C L+ ++M +PV++ S Q +ER I+ W + L CP T Q L
Sbjct: 236 CPVRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLM-----VCPKTRQALSH 290
Query: 129 LELKPNIGLAGAIEEWVNRN-------VEVQVST-----VVETLR---KENPEVDGLD-K 172
L PN + + W N +E+ S+ +VE++R EN + LD +
Sbjct: 291 TTLTPNFIVRAFLASWCETNNVYPPDPLELIHSSEPFPLLVESVRASSSENGHSESLDAE 350
Query: 173 ALDIVFKISEEHPSNRYRV-------------------------------RNAGVVLLIV 201
L VF S P V R+ G++ V
Sbjct: 351 ELRQVFSRSASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHPGIIPATV 410
Query: 202 KLLKSSS-------------KSVGTILRSKALMALLSMAKDEESKKIMLEE-GVTKSVIH 247
+ SSS KS + +A + +A++ +I++ S++
Sbjct: 411 RETGSSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVS 470
Query: 248 SLIGNSEKEKEYAVKLLLEFCIDEAYCKSVASEKGALVLLSSM--TGNLELPALSNLADE 305
L E+ + AV LL I++ KS+ +E GA+V L + TG LE A +N A
Sbjct: 471 LLYSTDERIQADAVTCLLNLSINDNN-KSLIAESGAIVPLIHVLKTGYLE-EAKANSAAT 528
Query: 306 VFKKMERIEEIVQPLAAAGRFEPLINRLCQGSDNVQIEMAFLVGKLTLTNSCKEHIARQC 365
+F + IEE + AG EPL++ L GS + + + A + L++ + K +
Sbjct: 529 LFS-LSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAG 587
Query: 366 A-KVLVELLSKPAGRA-ASLKALYNLSGLDDNATILVDSALLPALTDIL 412
A + LVEL+ G ++ L NL+ + + + + +P L +++
Sbjct: 588 AVRYLVELMDPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVV 636
Score = 37.7 bits (86), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 22/163 (13%)
Query: 130 ELKPNIGLAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKALDIVFKISEEHPSNRY 189
E K IG AGAIE V+ +S G A +F +S H N+
Sbjct: 537 EYKTEIGEAGAIEPLVDLLGSGSLS--------------GKKDAATALFNLSIHH-ENKT 581
Query: 190 RVRNAGVVLLIVKLLKSSSKSVGTILRSKALMALLSMAKDEESKKIMLEEGVTKSVIHSL 249
+V AG V +V+L+ + V KA++ L ++A E K + EEG ++ +
Sbjct: 582 KVIEAGAVRYLVELMDPAFGMV-----EKAVVVLANLATVREGKIAIGEEGGIPVLVEVV 636
Query: 250 IGNSEKEKEYAVKLLLEFCIDEA-YCKSVASEKGALVLLSSMT 291
S + KE A LL+ C +C +V E G + L ++T
Sbjct: 637 ELGSARGKENATAALLQLCTHSPKFCNNVIRE-GVIPPLVALT 678
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
F CP++ VMK PV L + Y+R +I+ W L+DG + TCP T Q+L++ E PN+
Sbjct: 15 FKCPISLDVMKSPVSLSTGVTYDRVSIQRW----LDDGNN-TCPATMQILQNKEFVPNLT 69
Query: 137 LAGAIEEW---VNRNVEVQVSTVVETLRKENPEVDGLDKALDIVFKISEEHPSNRYR 190
L I+ W +NR + E+ + P D ++ A++ F+I + S R
Sbjct: 70 LHRLIDHWSDSINRRAD------SESPESDTPTRDEINAAIE-RFRIENDARSKILR 119
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 72 LPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLEL 131
L ++ LCP++ ++M +PVV+E+ Y+R +I WF + TCP+TG++L S EL
Sbjct: 287 LKVEDLLCPISLEIMTDPVVIETGHTYDRSSITKWF-----GSGNITCPITGKILTSTEL 341
Query: 132 KPNIGLAGAIEEWVNRN 148
N+ + I + N
Sbjct: 342 VDNVSVRQVIRKHCKTN 358
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 72 LPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLEL 131
+P+ +F CP++ ++M++PV + + Q Y+R +IE W + G + TCPVT L L
Sbjct: 14 IPY-HFRCPISLELMQDPVTVCTGQTYDRASIESW----VSIGNNTTCPVTRAPLSDFTL 68
Query: 132 KPNIGLAGAIEEW--VNRNVEVQV---------STVVETLRKENPEVDGLD-------KA 173
PN L I+EW NR+ V+ T V L + + G A
Sbjct: 69 IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAA 128
Query: 174 LDIVFKISEEHPSNRYRVRNAGVVLLIVKLLKSSSKSVGTILRSKALMALLSMAKDEESK 233
L + + + NR + +++K+L S + S + S AL+ +L + + +
Sbjct: 129 LRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQFV 188
Query: 234 KIMLEEGVTKSVIHSLIGNSEKEKEYAVKLL 264
I + G + + L +S + + A L+
Sbjct: 189 SISSDPGRVEFLTRLLFDSSIETRVNAAALI 219
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 32/218 (14%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
F CP++ ++MK+PV++ + Q YER +I+ W D TCP + + L L PN
Sbjct: 252 FRCPISLELMKDPVIVSTGQTYERSSIQKWL-----DAGHKTCPKSQETLLHAGLTPNYV 306
Query: 137 LAGAIEEWVNRN---------------------VEVQVSTVVETLRK-ENPEVDGLDKAL 174
L I W N + + V+ L K N + A
Sbjct: 307 LKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAA 366
Query: 175 DIVFKISEEHPSNRYRVRNAGVVLLIVKLLKSSSKSVGTILRSKALMALLSMAKDEESKK 234
+ +++ + NR + AG + L+V+LL S + ++ ALL+++ +E +K
Sbjct: 367 GELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRT----QEHSVTALLNLSINEGNKG 422
Query: 235 IMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEF-CIDE 271
+++ G ++ L S + +E A L IDE
Sbjct: 423 AIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDE 460
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 368 VLVELLSKPAGRAA--SLKALYNLSGLDDNATILVDSALLPALTDILFKSHDASPELKEL 425
+LVELLS P R S+ AL NLS + N +VD+ A+TDI+ + S E +E
Sbjct: 391 LLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAG---AITDIVEVLKNGSMEAREN 447
Query: 426 AAATI 430
AAAT+
Sbjct: 448 AAATL 452
>sp|Q5FVN8|WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus
norvegicus GN=Wdsub1 PE=2 SV=1
Length = 476
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
F+CP+T+++MK+PV+ +YER+A+E W + + T P+T L SL L PN
Sbjct: 408 FICPITRELMKDPVIASDGYSYEREAMESWIHK-----KKRTSPMTNLALPSLVLTPNRT 462
Query: 137 LAGAIEEWVNRN 148
L AI W+ +
Sbjct: 463 LKMAINRWLETH 474
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
F CPL+ ++M++PVVL S Q Y++ I+ W L G + TCP T QVL L PN+
Sbjct: 78 FRCPLSNELMRDPVVLASGQTYDKLFIQKW----LSSG-NRTCPKTQQVLPHTALTPNLL 132
Query: 137 LAGAIEEWVNRN 148
+ I +W +N
Sbjct: 133 IREMISKWCKKN 144
>sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus
musculus GN=Wdsub1 PE=2 SV=1
Length = 474
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
F+CP+T+++MK+PV+ +YER+A+E W + + T P+T L SL L PN
Sbjct: 406 FICPITRELMKDPVIASDGYSYEREAMESWIHK-----KKRTSPMTNLALPSLVLTPNRT 460
Query: 137 LAGAIEEWVNRN 148
L AI W+ +
Sbjct: 461 LKMAINRWLETH 472
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 70 HILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSL 129
H P + F+CP+T +M++P V YE +AI WFER E T P+ + L
Sbjct: 350 HREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHE-----TSPMINKRLPHT 404
Query: 130 ELKPNIGLAGAIEEWVN 146
L PN+ L AI+EW+
Sbjct: 405 SLVPNLALRSAIQEWLQ 421
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 64 ELEEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTG 123
E+ + I P+ F CPL+ ++M +PV++ S Q ++R +I+ W + L CP T
Sbjct: 231 EVAKGISIPPY--FRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGL-----AVCPRTR 283
Query: 124 QVLKSLELKPNIGLAGAIEEWVNRN 148
QVL EL PN + I W+ N
Sbjct: 284 QVLTHQELIPNYTVKAMIASWLEAN 308
Score = 38.9 bits (89), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 324 GRFEPLINRLCQGSDNVQIEMAFLVGKLTLTNSCKEHIARQCAKV--LVELLSKPA--GR 379
G EPL++ L G+D + A + L++ +E I + A + LV LL K G+
Sbjct: 555 GAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGK 614
Query: 380 AASLKALYNLSGLDDNATILVDSALLPALTDILFKSHDASPELKELAAATIANV 433
+ AL+NLS DN +V + + L ++L D E+ + A A +AN+
Sbjct: 615 KDAASALFNLSITHDNKARIVQAKAVKYLVELL----DPDLEMVDKAVALLANL 664
Score = 33.9 bits (76), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 169 GLDKALDIVFKISEEHPSNRYRVRNAGVVLLIVKLLKSSSKSVGTILRSKALMALLSMAK 228
G A +F +S H N+ R+ A V +V+LL + V KA+ L +++
Sbjct: 613 GKKDAASALFNLSITH-DNKARIVQAKAVKYLVELLDPDLEMV-----DKAVALLANLSA 666
Query: 229 DEESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFCIDEAYCKSVASEKGAL 284
E ++ ++ EG ++ ++ S++ KE A +LL+ C++ ++ ++GA+
Sbjct: 667 VGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAI 722
Score = 33.5 bits (75), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 187 NRYRVRNAGVVLLIVKLLKSSSKSVGTILRSKALMALLSMAKDEESKKIMLEEGVTKSVI 246
NR + G + ++ LL S K + + A+ ALL+++ E +K +++E G + ++
Sbjct: 506 NRVHIGRCGAITPLLSLLYSEEK----LTQEHAVTALLNLSISELNKAMIVEVGAIEPLV 561
Query: 247 HSLIGNSEKEKEYAVKLLLEFCIDEAYCKSVASEKGALVLLSSMTGNLELPALSNLADEV 306
H L +++ KE + L + + + + A+ L ++ G + A +
Sbjct: 562 HVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASAL 621
Query: 307 F 307
F
Sbjct: 622 F 622
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 66 EEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQV 125
E + +I F CP++ VM+ PV L + Y+R +I+ W DG + TCP T Q+
Sbjct: 5 ETETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWL-----DGGNNTCPATMQL 59
Query: 126 LKSLELKPNIGLAGAIEEW 144
LK+ + PN+ L I W
Sbjct: 60 LKTKDFVPNLTLQRLINIW 78
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 72 LPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLEL 131
L + CP++ ++M +PVVLES Y+R +I WF + TCP TG+ L S L
Sbjct: 277 LNVDDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASG-----NITCPKTGKTLVSTVL 331
Query: 132 KPNIGLAGAIEEWVNRN-----------VEVQVSTVVETLRKENPEV----------DGL 170
N + I+ + +N V+V S E K E + +
Sbjct: 332 VDNFSVKQVIQSYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEEM 391
Query: 171 DKALDIVFKISEEHPSNRYRVRNAGVVLLIVKLLKSSSKSVGTILRSKALMALLSMAKDE 230
KAL + +++ R + AGVV ++K+L+S + + A+ +++++KD
Sbjct: 392 VKALVEIRILTKTSTFYRSCLVEAGVVESLMKILRSDDPRI----QENAMAGIMNLSKDI 447
Query: 231 ESK-KIMLEEGVTKSVIHSLI--GNSEKEKEYAVKLLL 265
K +I+ E+G +I ++ G + ++YA L
Sbjct: 448 AGKTRIVGEDGGGLRLIVEVLNDGARRESRQYAAAALF 485
Score = 36.6 bits (83), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 184 HPSNRYRVRNAGVVLLIVKLLKSSSKSVGTILRSKALMALLSMAKDEESKKIMLEEGVTK 243
P N +R+ AG+V +++ L+KS S G S A++A MA+ + +L G K
Sbjct: 535 QPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILA--KMAEYPDGMISVLRRGGLK 592
Query: 244 SVIHSLIGNSE---KEKEYAVKLLLEFC 268
+ ++G+SE K++ V LLL C
Sbjct: 593 LAV-KILGSSEVSPATKQHCVALLLNLC 619
>sp|A0AUS0|WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio
GN=wdsub1 PE=2 SV=1
Length = 487
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
Query: 67 EDCHILPFKN-----FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPV 121
E+ ++P N FLCP+T+++MK+PV+ +YER+AIE W ++ T P+
Sbjct: 406 EELKMVPVYNGTPDEFLCPITREIMKDPVIAADGYSYEREAIEAWIST-----KNRTSPM 460
Query: 122 TGQVLKSLELKPNIGLAGAIEEW 144
T L++ L PN L AI W
Sbjct: 461 TNLPLQTTLLTPNRTLKMAIFRW 483
>sp|Q8N9V3|WSDU1_HUMAN WD repeat, SAM and U-box domain-containing protein 1 OS=Homo
sapiens GN=WDSUB1 PE=1 SV=3
Length = 476
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
F+CP+T+++MK+PV+ +YE++A+E W + + T P+T VL S L PN
Sbjct: 408 FICPITRELMKDPVIASDGYSYEKEAMENWISK-----KKRTSPMTNLVLPSAVLTPNRT 462
Query: 137 LAGAIEEWV 145
L AI W+
Sbjct: 463 LKMAINRWL 471
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 76 NFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNI 135
+F CPL+ +VM +PV++ S Q YE+ I+ W + L+ CP T Q L L PN
Sbjct: 233 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLK-----VCPKTRQTLTHTTLIPNY 287
Query: 136 GLAGAIEEWVNRN 148
+ I W N
Sbjct: 288 TVKALIANWCETN 300
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 123/292 (42%), Gaps = 54/292 (18%)
Query: 149 VEVQVSTVVETLRKENPEVDGLDKALDIVFKISEEHPSNRYRVRNAGVVLLIVKLLKSSS 208
VE QV +VE L+ + +D +A + +++ + NR + N+G ++L+V+LL S+
Sbjct: 539 VETQVKKLVEELKSSS--LDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTD 596
Query: 209 KSVGTILRSKALMALLSMAKDEESKKIMLEEGVTKSVIHSLIGNSEKEKEYAVKLLLEFC 268
+ + A+ ALL+++ ++ +KK + + G + +IH L S + KE + L
Sbjct: 597 SAT----QENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLS 652
Query: 269 IDEAYCKSVASEKGALVLLSSMTGNLELPALSNLADEVFKKMERIEEIVQPLAAAGRFEP 328
+ IEE + +G P
Sbjct: 653 V-------------------------------------------IEENKIKIGQSGAIGP 669
Query: 329 LINRLCQGSDNVQIEMAFLVGKLTLTNSCKEHIARQCA-KVLVELLSKPAGRA-ASLKAL 386
L++ L G+ + + A + L++ K I + A + L++L+ AG ++ L
Sbjct: 670 LVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMVDKAVAVL 729
Query: 387 YNLSGLDDNATILVDSALLPALTDILFKSHDASPELKELAAATIANVVSNPG 438
NL+ + + + +P L +++ S KE AAA + + +N G
Sbjct: 730 ANLATIPEGRNAIGQEGGIPLLVEVV---ELGSARGKENAAAALLQLSTNSG 778
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 58 ALNW-DSELEEDCHILPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRD 116
L+W +SE E + I P F CP++ +MK+PV++ + Y+R +IE W + +
Sbjct: 17 VLSWPESEPESEITIPP--EFQCPISIDLMKDPVIISTGITYDRVSIETWI-----NSGN 69
Query: 117 PTCPVTGQVLKSLELKPNIGLAGAIEEW 144
TCPVT VL + + PN + I+ W
Sbjct: 70 KTCPVTNTVLTTFDQIPNHTIRKMIQGW 97
>sp|Q9SW11|PUB35_ARATH U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35
PE=1 SV=2
Length = 835
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 73 PFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELK 132
P +F+CPL K VM EP V Y+R AIE W + T P+T L S L
Sbjct: 766 PPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLK------EHNTSPMTDSPLHSKNLL 819
Query: 133 PNIGLAGAIEEW 144
PN L AI EW
Sbjct: 820 PNYTLYTAIMEW 831
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 38/171 (22%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLK-SLELKPNI 135
F+CP++ ++MK+PV S Y+R+ I W E+ P+CPVT Q L +L PN
Sbjct: 14 FICPISLEIMKDPVTTVSGITYDRQNIVKWLEKV------PSCPVTKQPLPLDSDLTPNH 67
Query: 136 GLAGAIEEWVNRNVEVQVSTVVETLRKENPEVDGLDKALDIVFKISEEHPSNRYRVRNAG 195
L I+ W VE + VV R P V P +
Sbjct: 68 MLRRLIQHWC---VENETRGVV---RISTPRV-----------------PPGKL-----N 99
Query: 196 VVLLIVKLLKSSSKSVGTILRSKALMALLSMAKDEESKKIMLEEGVTKSVI 246
VV I L K +++G R + L L +A D ++++M E GV KS+I
Sbjct: 100 VVEEIKNLKKFGQEALG---REETLQKLEVLAMDGNNRRLMCECGVHKSLI 147
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 73 PFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELK 132
P F+CP++++VM+EP V YE +++ W L++G + T P+T L L
Sbjct: 497 PPSYFICPISQEVMREPRVAADGFTYEAESLREW----LDNGHE-TSPMTNLKLAHNNLV 551
Query: 133 PNIGLAGAIEEWVNRN 148
PN L AI+EW+ RN
Sbjct: 552 PNHALRSAIQEWLQRN 567
>sp|Q8S8S7|PUB34_ARATH U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34
PE=3 SV=1
Length = 801
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 76 NFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNI 135
++ CP+ +++M+EP + YERKAI W E + PVT Q L +L PN
Sbjct: 728 HYFCPILREIMEEPEIAADGFTYERKAILAWLE------KHNISPVTRQKLDHFKLTPNH 781
Query: 136 GLAGAIEEWVNRNVEVQVSTVV 157
L AI +W +R V+ S VV
Sbjct: 782 TLRSAIRDWKSR---VRFSNVV 800
>sp|Q9FKG5|PUB51_ARATH U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51
PE=2 SV=2
Length = 796
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 37 RRILTSLQRILDTWSVVPDVAALNWDSELEEDCHILPFKNFLCPLTKQVMKEPVVLESAQ 96
+ IL L+R+ + S+ ++ A N L + H P +F CP+TK VM+ P V
Sbjct: 694 KEILPVLERLKEVASIARNMFADN----LIDHHHNAP-THFYCPITKDVMENPCVASDGY 748
Query: 97 AYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIGLAGAIEEW 144
YE++AI+ W + ++ P+T S L PN L AI+EW
Sbjct: 749 TYEKRAIKEWLQ------KNHKSPMTDLPFPSDSLLPNHSLLSAIKEW 790
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 53/222 (23%)
Query: 72 LPFKNFLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLEL 131
+P+ +F CP++ +M +PV + + Q Y+R +I+ W + TCPVT L L
Sbjct: 14 IPY-HFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAM-----GNTTCPVTRVALSDFTL 67
Query: 132 KPNIGLAGAIEEW--VNRNVEVQVSTVVETLRKENPEVDGLDKALDIVFKISEEHPSNRY 189
PN L I+EW NR+ V+ R P + P++
Sbjct: 68 IPNHTLRRLIQEWCVANRSNGVE--------RIPTP-----------------KQPADPI 102
Query: 190 RVRNAGVVLLIVKLLKSSSKSVGTIL----RSKALMALLSMAKDEESKKIMLEEGVTKSV 245
VR+ LL +S GT + R+ A+ L +A+D E ++++ + +
Sbjct: 103 SVRS---------LLSQASAITGTHVSVRSRAAAIRRLRGLARDSEKNRVLIAGHNAREI 153
Query: 246 -IHSLIGNSEKE------KEYAVKLLLEFCIDEAYCKSVASE 280
+ L + E ++ LL+ + E C++VAS+
Sbjct: 154 LVRILFADIETTSLSSELVSESLALLVLLHMTETECEAVASD 195
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 40/215 (18%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFE--RCLEDGRDPTCPVTGQVLKSLELKPN 134
F+CP++ + M++PV L + Q YER I WF C TCP T Q L + PN
Sbjct: 64 FICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHC-------TCPTTMQELWDDLVTPN 116
Query: 135 IGLAGAIEEWVNR----------NVEVQVSTVVETLRKENPEVDGLDKALDIVFKISEEH 184
L I W ++ +V+ + ++ TLRK + AL + ++ H
Sbjct: 117 KTLHQLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLRKAKGKAK--VHALSELKQVVMAH 174
Query: 185 PSNRYRVRNAGVVLLIVKLLKS-SSKSVGTILRSKALMALLSMAKDEESKK--------- 234
+ V + G V +I LL +S +VG S+A+ L+++ D +SK
Sbjct: 175 AIAKKTVVDEGGVFVISSLLSPFTSHAVG----SEAIAILVNLELDSDSKAGLMQPARVS 230
Query: 235 ---IMLEEGVTKSVIHS--LIGNSEKEKEYAVKLL 264
ML +G ++ I+ LIG +EK + +L+
Sbjct: 231 LMVDMLNDGSIETKINCARLIGRLVEEKGFRAELV 265
>sp|Q5ZMC3|WSDU1_CHICK WD repeat, SAM and U-box domain-containing protein 1 OS=Gallus
gallus GN=WDSUB1 PE=2 SV=2
Length = 476
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 77 FLCPLTKQVMKEPVVLESAQAYERKAIEYWFERCLEDGRDPTCPVTGQVLKSLELKPNIG 136
FLCP+T+++MK+PV+ +YE++A+E W + + R + P+T L SL L PN
Sbjct: 408 FLCPITRELMKDPVIAADGYSYEKEAMENW----ISNNRRSS-PMTNLPLPSLVLTPNRT 462
Query: 137 LAGAIEEWV 145
L AI W+
Sbjct: 463 LKMAISRWL 471
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 292,939,294
Number of Sequences: 539616
Number of extensions: 11902812
Number of successful extensions: 37693
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 37352
Number of HSP's gapped (non-prelim): 319
length of query: 859
length of database: 191,569,459
effective HSP length: 126
effective length of query: 733
effective length of database: 123,577,843
effective search space: 90582558919
effective search space used: 90582558919
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)