BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003000
(859 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2JNP0|FTSH_SYNJB ATP-dependent zinc metalloprotease FtsH OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ftsH PE=3 SV=1
Length = 638
Score = 338 bits (868), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 205/486 (42%), Positives = 285/486 (58%), Gaps = 34/486 (6%)
Query: 355 QNPHLKMAMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTH 414
QN A+ F KS ARV+ +E + F+DVAG+ + +LEL E+V F +
Sbjct: 141 QNGPGSQALNFGKSRARVQ----------MEPKTQITFNDVAGIDQAKLELAEVVDFLKN 190
Query: 415 GEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRV 474
E + G +IP G+LL GPPG GKTLLA+AVAGEAGV FFSIS S+FVE++VGVGASRV
Sbjct: 191 SERFTALGAKIPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSEFVEMFVGVGASRV 250
Query: 475 RSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVIT 534
R L+++AK NAP +VFIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I
Sbjct: 251 RDLFEQAKQNAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNSGIIV 310
Query: 535 IASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMT 594
IA+TNRPD+LD AL+RPGRFDR++ + +P GR+EILKVHAR K ++ DVD +A T
Sbjct: 311 IAATNRPDVLDAALLRPGRFDRQVTVDRPDFQGRLEILKVHARGKTLSADVDLEKLARRT 370
Query: 595 DGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ-VAI 653
G GA+LAN++ AAI R TEI+ D++ A G + SE ++ VA
Sbjct: 371 PGFTGADLANLLNEAAILAARRNLTEISMDEINDAVDRVLAGPEKKDRLMSERRKELVAY 430
Query: 654 NEAAMAVVAVNFPDLKNIEFVTIAPRA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITV 712
+EA A+V P+ I+ VTI PR L + D M G+ +R L + +TV
Sbjct: 431 HEAGHALVGSLLPNYDPIQKVTIIPRGQAGGLTWFMPSDDDM----GLTTRAHLKNMMTV 486
Query: 713 QLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGL------SNFWVA 765
L R A+E+ GE +++T A AR V G+SD+ + +N ++
Sbjct: 487 ALGGRVAEEVVYGESEITTGAASDLQQVARIARNMVTRFGMSDRLGNVALGRQYANIFLG 546
Query: 766 DRINE-----------IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQE 814
I ID E R++N Y+RA +++ NR LLD + LVE +++ +E
Sbjct: 547 REIAAERDFSEETAALIDEEVRRLVNEAYQRATYLIRENRALLDRIARRLVEAETIDGEE 606
Query: 815 FFHLVE 820
+++
Sbjct: 607 LQAIID 612
>sp|P72991|FTSH3_SYNY3 ATP-dependent zinc metalloprotease FtsH 3 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH3 PE=1 SV=1
Length = 616
Score = 335 bits (860), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 201/477 (42%), Positives = 278/477 (58%), Gaps = 30/477 (6%)
Query: 362 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
AM F KS ARV+ +E V F DVAG+ + +LEL E+V F + + +
Sbjct: 140 AMNFGKSKARVQ----------MEPQTQVTFGDVAGIEQAKLELTEVVDFLKNADRFTEL 189
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G +IP G+LL GPPG GKTLLAKAVAGEAGV FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 190 GAKIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQA 249
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
K NAP +VFIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I +A+TNRP
Sbjct: 250 KANAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRP 309
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
D+LD AL+RPGRFDR++ + +P GR EIL VHAR K ++ DVD +A T G GA+
Sbjct: 310 DVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGAD 369
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ-VAINEAAMAV 660
L+N++ AAI R TEI+ D++ A G + SE + VA +EA A+
Sbjct: 370 LSNLLNEAAILAARRNLTEISMDEVNDAIDRVLAGPEKKNRVMSEKRKTLVAYHEAGHAL 429
Query: 661 VAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAAD 720
V PD ++ ++I PR GR G + + G+ SR L + + V L R A+
Sbjct: 430 VGALMPDYDPVQKISIIPR-GRAGGLTWFTPSEDRMESGLYSRSYLQNQMAVALGGRIAE 488
Query: 721 ELWCGEGQLSTIWAETADNARSAARTFVL-GGLSDK-----------HFGLSNFWVADR- 767
E+ GE +++T + AR V G+SD+ L +DR
Sbjct: 489 EIIFGEEEVTTGASNDLQQVARVARQMVTRFGMSDRLGPVALGRQGGGVFLGRDIASDRD 548
Query: 768 -----INEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 819
ID E ++++ Y+RAK++L NR +LD + LVEK+++ +E L+
Sbjct: 549 FSDETAAAIDEEVSQLVDQAYQRAKQVLVENRGILDQLAEILVEKETVDSEELQTLL 605
>sp|B8D065|FTSH_HALOH ATP-dependent zinc metalloprotease FtsH OS=Halothermothrix orenii
(strain H 168 / OCM 544 / DSM 9562) GN=ftsH PE=3 SV=1
Length = 630
Score = 332 bits (852), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 198/478 (41%), Positives = 282/478 (58%), Gaps = 26/478 (5%)
Query: 363 MQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 422
MQ M+ G ++GK + E G V F DVA +++ EL+E+V+F + + + R G
Sbjct: 133 MQRMQGGGSQMMSFGKSRARLSENGKKVTFEDVANYEEVKEELQEVVEFLKNPDKFTRMG 192
Query: 423 VRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 482
++P G+LL GPPG GKTLLA+AVAGEAGV FF IS S FVE++VGVGASRVR L+++ K
Sbjct: 193 AKVPKGVLLVGPPGTGKTLLARAVAGEAGVPFFIISGSDFVEMFVGVGASRVRDLFEQGK 252
Query: 483 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 542
NAP ++FIDELDAVGR+RG G G ER+ TLNQLLV +DGFE +I +A+TNRPD
Sbjct: 253 KNAPCIIFIDELDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFEPNEGIIVMAATNRPD 312
Query: 543 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 602
+LDPAL+RPGRFDR++ + KP + GRM ILK+H R KP+ADDVD +A T G GA++
Sbjct: 313 VLDPALLRPGRFDRQVVVDKPDVKGRMGILKIHLRNKPVADDVDVEVLAKRTPGFTGADM 372
Query: 603 ANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ-VAINEAAMAVV 661
N+ AAI +R + +IT +D A G + + SE R+ VA +E A+V
Sbjct: 373 ENLANEAAILAVRRRKNKITMEDFDDAIDKVIAGPAKKSKVMSERERKLVAYHETGHALV 432
Query: 662 AVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 721
++I PR GR G M+ K + +S+Q LLD ITV L RA++
Sbjct: 433 GDLLEHADRTHKISIVPR-GRAGG---MRWALPKEDKNFMSKQELLDQITVLLGGRASES 488
Query: 722 LWCGEGQLSTIWAETADNARSAARTFV--------LGGLSDKHFGLSNFWVADRIN---- 769
++ + +ST + A AR V LG L+ H ++ I+
Sbjct: 489 IFLED--ISTGAQNDLERATKLARAMVTEYGMSEKLGPLTLGHKHDEQIFLGRDISRQRN 546
Query: 770 -------EIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVE 820
EID E I+ CY+RA++ILQ N ++ +V EL+++++L ++ L++
Sbjct: 547 YSEEIAAEIDKEVSSIIEYCYQRAEKILQENTAKVERIVRELLDRETLDAEQLQKLIK 604
>sp|Q8YMZ8|FTSH_NOSS1 ATP-dependent zinc metalloprotease FtsH OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=ftsH PE=3 SV=1
Length = 656
Score = 332 bits (851), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 199/475 (41%), Positives = 280/475 (58%), Gaps = 31/475 (6%)
Query: 362 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
AM F KS AR + +E VKF DVAG+ + + EL+E+V F E +
Sbjct: 178 AMNFGKSRARFQ----------MEAKTGVKFDDVAGIEEAKEELQEVVTFLKQPERFTAV 227
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G RIP G+LL GPPG GKTLLAKA+AGEA V FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 228 GARIPKGVLLVGPPGTGKTLLAKAIAGEAAVPFFSISGSEFVEMFVGVGASRVRDLFKKA 287
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
KDNAP ++FIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I IA+TNRP
Sbjct: 288 KDNAPCLIFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRP 347
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
D+LD AL+RPGRFDR++ + P L GR+EIL+VH+R K + V A+A T G GA+
Sbjct: 348 DVLDSALLRPGRFDRQVIVDAPDLKGRLEILQVHSRNKKVDPSVSLEAIARRTPGFTGAD 407
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVV 661
LAN++ AAI R + IT ++ A GM S++ R +A +E +V
Sbjct: 408 LANLLNEAAILTARRRKEAITILEIDDAVDRVVAGMEGTPLVDSKSKRLIAYHEVGHGLV 467
Query: 662 AVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 721
D ++ VT+ PR G+ G + ++G++SR L IT LA RAA+E
Sbjct: 468 GTLLKDHDPVQKVTLIPR-GQAQGLTWFTPNE---EQGLISRSQLKARITSTLAGRAAEE 523
Query: 722 LWCGEGQLSTIWAETADNARSAARTFV-------LGGLSDKHFGLSNFWVADRIN----- 769
+ G+ +++T + S AR V LG LS ++ F D +N
Sbjct: 524 IVFGKPEVTTGAGDDLQKVTSMARQMVTKFGMSELGPLSLENQSGEVFLGRDWMNKSDYS 583
Query: 770 -----EIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 819
+ID++ I+N CY+ +KE+LQ NR +++ +V+ L E++++ F +V
Sbjct: 584 EEIAAKIDSQVREIINTCYQTSKELLQTNRVVMERLVDLLTEQETIEGDLFRKIV 638
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 325 bits (832), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 191/440 (43%), Positives = 263/440 (59%), Gaps = 24/440 (5%)
Query: 390 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 449
V F DVAG+ +++ EL EIV F H + Y G RIP G+LL GPPG GKTLLAKAVAGE
Sbjct: 154 VTFDDVAGIDEVKEELAEIVDFLKHPKRYLELGARIPKGVLLYGPPGTGKTLLAKAVAGE 213
Query: 450 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 509
AGV FFSIS S FVE++VGVGASRVR L+++AK N+P +VFIDE+DAVGR+RG G G
Sbjct: 214 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIVFIDEIDAVGRQRGAGYGGGH 273
Query: 510 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 569
ER+ TLNQLLV +DGF +I IA+TNRPD+LDPAL+RPGRFDR+I I +P L GR+
Sbjct: 274 DEREQTLNQLLVEMDGFSANEGIIIIAATNRPDVLDPALLRPGRFDRQIVIDRPDLKGRL 333
Query: 570 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 629
I +VHA+ KP+ DVD +A T G GA++AN++ AA+ R + +I+ D+ A
Sbjct: 334 AIFQVHAKGKPLEPDVDLEVLAKRTPGFTGADIANLMNEAALLAARRRKKKISMQDVEDA 393
Query: 630 AQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYV 687
G ++K R S + R A +EA AVV P + + +TI PR GR +GY
Sbjct: 394 IDRVLAGGPEKKSRVISEKEKRVTAYHEAGHAVVGHMLPHMDPLHKITIIPR-GRAMGYT 452
Query: 688 RMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTF 747
++ +S+ +LD +T+ L RAA+E+ GE S + + A R
Sbjct: 453 LFLPVEDRYN---ISKSEILDRMTMALGGRAAEEITFGE-ITSGAQDDIERTTQWARRMV 508
Query: 748 VLGGLSDKHFGLSNFWVADRI-----------------NEIDTEALRILNLCYERAKEIL 790
G+S+K L+ D + ID E + +++ Y+RA +IL
Sbjct: 509 TEWGMSEKLGPLTYGMKQDEVFLARDMTRLRNYSEEVAGLIDEEVRKFVHMAYQRAIDIL 568
Query: 791 QRNRNLLDAVVNELVEKKSL 810
+R+ L+ V L+EK++L
Sbjct: 569 TEHRDALEKVSEVLLEKETL 588
>sp|Q10ZF7|FTSH_TRIEI ATP-dependent zinc metalloprotease FtsH OS=Trichodesmium erythraeum
(strain IMS101) GN=ftsH PE=3 SV=1
Length = 667
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 198/497 (39%), Positives = 289/497 (58%), Gaps = 38/497 (7%)
Query: 362 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
A+ F KS AR + +E V F DVAG+ + + EL+E+V F E +
Sbjct: 182 ALNFGKSRARFQ----------MEAKTGVLFEDVAGIEEAKEELQEVVSFLKKPEKFTAI 231
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G +IP G+LL GPPG GKTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 232 GAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA 291
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
K+NAP ++FIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I IA+TNRP
Sbjct: 292 KENAPCIIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNSGIIIIAATNRP 351
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
D+LD AL+RPGRFDR++ + P GR+ IL+VHAR K + ++ A+A T G GA+
Sbjct: 352 DVLDVALLRPGRFDRQVTVDLPAYKGRLGILEVHARNKKLTPEISLEAIARKTPGFSGAD 411
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERG-----MLDRKERSSETWRQVAINEA 656
LAN++ AAI R + IT +++ A G +LD K++ R +A +E
Sbjct: 412 LANMLNEAAILTARRRKEGITPNEIDDAIDRVTIGLSLTPLLDGKKK-----RLIAYHEL 466
Query: 657 AMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAP 716
A++ + + VTI PR+G G+ + MD GM +R L+D IT+ L
Sbjct: 467 GHALLMTLLKNSDLLNKVTIIPRSGGVGGFAQPIMDEGMIDSGMYTRGWLIDRITISLGG 526
Query: 717 RAADELWCGEGQLSTIWAETADNARSAARTFV-------LGGLS----DKHFGLSNFWVA 765
RAA+E G +++ A + S AR V LG L+ + L W +
Sbjct: 527 RAAEEEIFGLAEVTVGAANDIRSVASLAREMVTRYGMSDLGPLALENPNGEVFLGRGWQS 586
Query: 766 DRIN-------EIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHL 818
+ +ID + ++ CYE+A++I++ NR L+D +V+ L+EK+++ EF +
Sbjct: 587 QQPEYSEEVAIKIDHQIRTMVFHCYEKARKIIRENRVLMDRLVDLLIEKETIEGDEFRRI 646
Query: 819 VELHGSLEPMPPSIVDI 835
V + L S++++
Sbjct: 647 VSEYTELPKKQKSLINL 663
>sp|Q9WZ49|FTSH_THEMA ATP-dependent zinc metalloprotease FtsH OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=ftsH PE=1 SV=1
Length = 610
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 193/446 (43%), Positives = 271/446 (60%), Gaps = 26/446 (5%)
Query: 390 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 449
V F DV G + EL+E+V+F + R G R+P GILL GPPG GKTLLA+AVAGE
Sbjct: 158 VTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGE 217
Query: 450 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 509
A V FF IS S FVE++VGVGA+RVR L+ +AK +AP +VFIDE+DAVGR RG G G
Sbjct: 218 ANVPFFHISGSDFVELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGRHRGAGLGGGH 277
Query: 510 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 569
ER+ TLNQLLV +DGF+ + +I +A+TNRPDILDPAL+RPGRFD+KI + P ++GR
Sbjct: 278 DEREQTLNQLLVEMDGFDSKEGIIVMAATNRPDILDPALLRPGRFDKKIVVDPPDMLGRK 337
Query: 570 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 629
+IL++H R KP+A+DV+ +A T G VGA+L N+V AA+ R+GR +IT D +A
Sbjct: 338 KILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEA 397
Query: 630 AQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYV 687
G RK + S + R +A +EA AVV+ P+ + + ++I PR + LGY
Sbjct: 398 IDRVIAGPA-RKSKLISPKEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYT 456
Query: 688 RMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTF 747
+ K+ ++SR LLD +T L RAA+E+ G+ +++ A + A AR
Sbjct: 457 LHLPEEDKY---LVSRNELLDKLTALLGGRAAEEVVFGD--VTSGAANDIERATEIARNM 511
Query: 748 V--------LGGLS----------DKHFGLSNFWVADRINEIDTEALRILNLCYERAKEI 789
V LG L+ K + + ++ID E +I+ CYERAKEI
Sbjct: 512 VCQLGMSEELGPLAWGKEEQEVFLGKEITRLRNYSEEVASKIDEEVKKIVTNCYERAKEI 571
Query: 790 LQRNRNLLDAVVNELVEKKSLTKQEF 815
+++ R LD +V L+EK+++ E
Sbjct: 572 IRKYRKQLDNIVEILLEKETIEGDEL 597
>sp|D4HA34|FTSH_PROAS ATP-dependent zinc metalloprotease FtsH OS=Propionibacterium acnes
(strain SK137) GN=ftsH PE=3 SV=1
Length = 717
Score = 323 bits (828), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 196/448 (43%), Positives = 272/448 (60%), Gaps = 37/448 (8%)
Query: 392 FSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAG 451
F+DVAG + EL+EI +F ++R G +IP G+LL GPPG GKTLLA+AVAGEAG
Sbjct: 166 FADVAGCQEAIDELQEIREFLAEPAKFQRVGAKIPKGVLLYGPPGTGKTLLARAVAGEAG 225
Query: 452 VNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQE 511
V FFSIS S FVE++VGVGASRVR L+++AK+ AP+++FIDE+DAVGR RG G G E
Sbjct: 226 VPFFSISGSDFVEMFVGVGASRVRDLFEQAKEAAPAIIFIDEIDAVGRHRGAGMGGGHDE 285
Query: 512 RDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEI 571
R+ TLNQLLV +DGF+ G VI IA+TNRPD+LDPAL+RPGRFDR+I + P L GR++I
Sbjct: 286 REQTLNQLLVEMDGFDVHGGVILIAATNRPDVLDPALLRPGRFDRQIAVEAPDLDGRLKI 345
Query: 572 LKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAI-----NMMRDGRTEI--TTD 624
LKVHA KPMADDVD ++A T GM GA+LAN++ AA+ N+ G +E+ D
Sbjct: 346 LKVHAHGKPMADDVDLASIARRTPGMTGADLANVLNEAALLTARANLPVIGNSELDEAID 405
Query: 625 DLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 684
++ Q + R ++++ ER A +E A+VA P ++ +TI PR GR L
Sbjct: 406 RVIAGPQKKTR-LMNQHER-----LVTAYHEGGHALVAAAMPGTDPVQKITILPR-GRAL 458
Query: 685 GYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAA 744
GY + D K+ + +R LLD + + RAA+EL + ST + + A A
Sbjct: 459 GYTMVMPDSDKYSQ---TRSELLDSMAYMMGGRAAEELIFHD--PSTGASNDIEKATKVA 513
Query: 745 RTFV-------------LG-GLSDKHFGLSNFWVADRINE----IDTEALRILNLCYERA 786
R V LG G ++ G++ D +E ID E +L ++ A
Sbjct: 514 RALVTQYGLSARVGTVQLGSGDTEPFLGMTAGQQRDYSDETAKIIDDEVRELLENAHQEA 573
Query: 787 KEILQRNRNLLDAVVNELVEKKSLTKQE 814
+ L NR +LD +V +L +++L+K E
Sbjct: 574 FDCLDANREVLDELVRQLFARETLSKAE 601
>sp|B4U7U4|FTSH_HYDS0 ATP-dependent zinc metalloprotease FtsH OS=Hydrogenobaculum sp.
(strain Y04AAS1) GN=ftsH PE=3 SV=1
Length = 636
Score = 322 bits (824), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 198/489 (40%), Positives = 291/489 (59%), Gaps = 38/489 (7%)
Query: 361 MAMQFMKSGARVRR-AYGKGLPQ-YLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMY 418
+ M+ M +G R ++GK + Y+E +VK +VAG+ +++ E+ E++++ +
Sbjct: 129 LMMRQMGNGGPTRAFSFGKSKAKVYIEEKPNVKLDNVAGMDEVKEEVAEVIEYLKDPARF 188
Query: 419 RRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLY 478
R+ G R P GIL G PGVGKTLLAKA+AGEA V F S+S S FVE++VGVGA+R+R +
Sbjct: 189 RKLGGRPPKGILFYGEPGVGKTLLAKALAGEAHVPFISVSGSDFVEMFVGVGAARMRDTF 248
Query: 479 QEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAST 538
+ A+ NAP +VFIDE+DAVGR RG I G ER+ TLNQLLV +DGF+ ++ IA+T
Sbjct: 249 ETARKNAPCIVFIDEIDAVGRSRGAINLGGNDEREQTLNQLLVEMDGFDTSEGILIIAAT 308
Query: 539 NRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMV 598
NRPDILDPAL+RPGRFDR+IFIPKP + GR EILKVHA+ KP+A DVD +A T G
Sbjct: 309 NRPDILDPALLRPGRFDRQIFIPKPDVKGRYEILKVHAKNKPLAKDVDLELIARATPGFT 368
Query: 599 GAELANIVEVAAINMMRDGRTEITTDDLLQAAQ-----IEERGM-LDRKERSSETWRQVA 652
GA+L NI+ AA+ R + I +DL +A +E RGM + KE+ ++A
Sbjct: 369 GADLENILNEAALLAARKRKDLIHMEDLEEAIDRVMMGLERRGMAISPKEK-----EKIA 423
Query: 653 INEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGY-VRMKMD--HMKFKEGMLSRQSLLDH 709
++EA A++ + PD + V+I PR G LG ++ +D H+ K +LSR
Sbjct: 424 VHEAGHALMGLMMPDADPLHKVSIIPR-GMALGVTTQLPIDDKHIYDKADLLSR------ 476
Query: 710 ITVQLAPRAADELWCGEGQLSTIWAETADNARSAA-RTFVLGGLSDKHFGLS-----NFW 763
I + + R A+E++ G+ ++T A A R G+S+ +S N +
Sbjct: 477 IHILMGGRCAEEVFYGKDGITTGAENDLQRATDLAYRIVATWGMSENVGPISVRRNINPF 536
Query: 764 VA---------DRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQE 814
+ D + EID E ++L YE K ++ N+ L +VV L+EK+++ +E
Sbjct: 537 LGGSTVTEGSPDLLKEIDKEVQKLLASAYEETKRVIAENKEALSSVVKRLIEKETIDCKE 596
Query: 815 FFHLVELHG 823
F ++ LHG
Sbjct: 597 FVEILSLHG 605
>sp|C7N1I1|FTSH_SLAHD ATP-dependent zinc metalloprotease FtsH OS=Slackia
heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC
11029 / RHS 1) GN=ftsH PE=3 SV=1
Length = 783
Score = 321 bits (823), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 186/448 (41%), Positives = 274/448 (61%), Gaps = 31/448 (6%)
Query: 389 DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAG 448
DV+FSDVAG + EL+EI F + Y++ G +IP G LL GPPG GKTLLA+AVAG
Sbjct: 281 DVRFSDVAGEDEAVEELQEIKDFLVNPGKYQKLGAKIPRGCLLVGPPGTGKTLLARAVAG 340
Query: 449 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 508
EA V FFSIS S+FVE++VGVGASRVR+L+++AK+ APS++FIDE+DAVGR+RG G G
Sbjct: 341 EANVPFFSISGSEFVEMFVGVGASRVRNLFEQAKEAAPSIIFIDEIDAVGRQRGTGLGGG 400
Query: 509 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 568
ER+ TLNQLLV +DGFE V+ IA+TNR D+LDPAL+RPGRFDR+I + P + GR
Sbjct: 401 HDEREQTLNQLLVEMDGFEKNDAVVLIAATNRVDVLDPALLRPGRFDRQIVVDGPDVKGR 460
Query: 569 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 628
++IL+VHA+ KP+ +DVD +A +T GM GA+L N++ AA+ R + +I D++ +
Sbjct: 461 VKILEVHAKNKPIGEDVDLERIAKLTSGMTGADLMNLMNEAALLTARRNKDKIGMDEVNE 520
Query: 629 AAQIEERGML--DRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 684
+ ER M +RK R + +T R +A +E+ A+V + + +TI PR G L
Sbjct: 521 SM---ERLMAGPERKTRVLNEKTRRTIAYHESGHALVGHMLENADPVHKITIVPR-GMAL 576
Query: 685 GYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAA 744
GY D KF ++SR ++LD + V + R A+E++CG+ ++T + + A A
Sbjct: 577 GYTMSIPDEDKF---LVSRSAMLDELAVFMGGRVAEEIFCGD--ITTGASNDLERATKTA 631
Query: 745 RTFVLG-----GLSDKHFGLSNF-------------WVADRINEIDTEALRILNLCYERA 786
R V+ L + FG N + + ID E R++ ++ A
Sbjct: 632 RKMVVSYGMSEALGQQTFGQPNHEVFLGRDYGNTQDYSPETAQRIDEEVARLMKEAHDTA 691
Query: 787 KEILQRNRNLLDAVVNELVEKKSLTKQE 814
EIL + + + L+E++++ +E
Sbjct: 692 YEILSARQEQMHTMAKVLLERETVDGEE 719
>sp|P37476|FTSH_BACSU ATP-dependent zinc metalloprotease FtsH OS=Bacillus subtilis
(strain 168) GN=ftsH PE=1 SV=1
Length = 637
Score = 320 bits (820), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 205/483 (42%), Positives = 277/483 (57%), Gaps = 37/483 (7%)
Query: 363 MQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 422
M F KS A++ Y E VKF DVAG + + EL E+V+F + G
Sbjct: 141 MNFGKSKAKL----------YTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELG 190
Query: 423 VRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 482
RIP G+LL GPPG GKTLLAKA AGEAGV FFSIS S FVE++VGVGASRVR L++ AK
Sbjct: 191 ARIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAK 250
Query: 483 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 542
NAP ++FIDE+DAVGR+RG G G ER+ TLNQLLV +DGF +I IA+TNR D
Sbjct: 251 KNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRAD 310
Query: 543 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 602
ILDPAL+RPGRFDR+I + +P +IGR +LKVHAR KP+ + V+ ++A T G GA+L
Sbjct: 311 ILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADL 370
Query: 603 ANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ-VAINEAAMAVV 661
N++ AA+ R + +I D+ +A G + S+ R VA +E V+
Sbjct: 371 ENLLNEAALVAARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVI 430
Query: 662 AVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 721
+ + + VTI PR G+ GY M ++ + ++ LLD I L R A+E
Sbjct: 431 GLVLDEADMVHKVTIVPR-GQAGGYAVMLPREDRYFQ---TKPELLDKIVGLLGGRVAEE 486
Query: 722 LWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK----HFGLSN----FWVADRIN--- 769
+ GE +ST A + AR V G+S+K FG S F D N
Sbjct: 487 IIFGE--VSTGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQN 544
Query: 770 -------EIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELH 822
EID E RI+ CYERAK+IL NR+ L+ + L++ ++L ++ HL++ H
Sbjct: 545 YSDQIAYEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLID-H 603
Query: 823 GSL 825
G+L
Sbjct: 604 GTL 606
>sp|A0LN68|FTSH_SYNFM ATP-dependent zinc metalloprotease FtsH OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=ftsH PE=3 SV=1
Length = 647
Score = 319 bits (818), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 200/491 (40%), Positives = 293/491 (59%), Gaps = 31/491 (6%)
Query: 363 MQFMKSGARVRRAYGKG-LPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
M+ M G + + GK + + E+ + + F DVAG+ + + ELEEIV+F ++R
Sbjct: 156 MRRMGGGPQGVLSVGKARVKIFAEKEITITFDDVAGIDEAKGELEEIVQFLKDPGKFQRL 215
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G RIP G+LL G PG GKTLLAKAVAGEAGV FFS+S S+FVE++VGVGA+RVR L+ +A
Sbjct: 216 GGRIPKGVLLVGAPGTGKTLLAKAVAGEAGVPFFSMSGSEFVEMFVGVGAARVRDLFGQA 275
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
KD+AP ++FIDELDA+G+ RGL G ER+ TLNQLLV +DGF+ R VI +A+TNRP
Sbjct: 276 KDHAPCIIFIDELDALGKARGLNPIGGHDEREQTLNQLLVEMDGFDPRSGVIIMAATNRP 335
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
+ILDPAL+RPGRFDR + I KP + GR IL+VH ++ + +VD +A MT G VGA+
Sbjct: 336 EILDPALLRPGRFDRHVAIDKPDIRGREAILRVHVKEVKLGSEVDLKKIAGMTPGFVGAD 395
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ--VAINEAAMA 659
LAN+V AA+ R R E+T D +AA G L++K R+ + VA +EA A
Sbjct: 396 LANLVNEAALVAARRDRDEVTMADFQEAAD-RIIGGLEKKNRAMNPKEKEIVAYHEAGHA 454
Query: 660 VVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAA 719
+VA+ P++ + V+I PR LGY + ++ +++R LLD + V L R +
Sbjct: 455 LVAMLLPNVDPVNKVSIIPRGIAALGYTQQLPTEDRY---LMTRNELLDRLQVLLGGRVS 511
Query: 720 DELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGLS----------NFWVADR- 767
+E+ G+ +ST A AR+ V+ G+S++ L+ + + R
Sbjct: 512 EEIIFGD--VSTGAQNDLQRATDIARSMVMEYGMSERLGPLTYTRDPRSAHLDLGLGSRE 569
Query: 768 -------INEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQE---FFH 817
EID E RI+ +E+ + L+R R L+ + L+EK+S+ +E F
Sbjct: 570 RDYSEMIAQEIDEEITRIVEDAHEKVRATLKRERGCLEKLAKILLEKESIDGEELKQFCQ 629
Query: 818 LVELHGSLEPM 828
V+ H + +P+
Sbjct: 630 EVKSHIARDPV 640
>sp|Q1AV13|FTSH_RUBXD ATP-dependent zinc metalloprotease FtsH OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=ftsH PE=3 SV=1
Length = 651
Score = 318 bits (815), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 189/450 (42%), Positives = 275/450 (61%), Gaps = 25/450 (5%)
Query: 390 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 449
V F+DVAG + EL EI +F + + +++ G RIP G LL GPPG GKTLLA+AVAGE
Sbjct: 186 VTFADVAGADEAVQELTEIKEFLENPQKFQKLGARIPKGALLVGPPGTGKTLLARAVAGE 245
Query: 450 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 509
AGV FFSIS S FVE++VGVGASRVR L+++AK N+P ++F+DE+DAVGR+RG G G
Sbjct: 246 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGH 305
Query: 510 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 569
ER+ TLNQLLV +DGF+ + +I +A+TNRPDILDPAL+RPGRFDR+I + +P L GR+
Sbjct: 306 DEREQTLNQLLVEMDGFDSKSGIIMLAATNRPDILDPALLRPGRFDRQIVVDRPDLPGRI 365
Query: 570 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 629
+ILKVH R KP+ +DVD +A T G GA+LAN+V AA+ R + +I ++ +A
Sbjct: 366 KILKVHTRGKPLGEDVDIETIARGTPGFTGADLANLVNEAALLAARHNKEQIEMAEMEEA 425
Query: 630 AQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVR 688
G + SE +++ A +EA A+V P+ + VTI PR G+ LG
Sbjct: 426 IDRVIAGPERKTRLISEKEKEITAYHEAGHAIVGALLPEADPVHKVTIIPR-GQALGVTM 484
Query: 689 MKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 748
+ +F M+SR L+ ++ L RAA+ + E ++T + + A AR V
Sbjct: 485 SLPEEDRF---MMSRAQLMAQLSYMLGGRAAERVVFEE--ITTGASNDIERATKVARQMV 539
Query: 749 L-GGLSDK----HFGLSNFWV------------ADRIN-EIDTEALRILNLCYERAKEIL 790
G+S+K G + V +D I +ID E R+++ Y+ A+++L
Sbjct: 540 TRYGMSEKLGLIALGQHDGQVFMGRDLHAQPDYSDEIAFQIDKEIRRLVDEAYDTAEDLL 599
Query: 791 QRNRNLLDAVVNELVEKKSLTKQEFFHLVE 820
RNR LL+ + ++L+E +++ + LVE
Sbjct: 600 VRNRRLLEKLASDLIEYETVDAEHLRRLVE 629
>sp|P73179|FTSH1_SYNY3 ATP-dependent zinc metalloprotease FtsH 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH1 PE=2 SV=1
Length = 665
Score = 318 bits (815), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 191/485 (39%), Positives = 278/485 (57%), Gaps = 31/485 (6%)
Query: 362 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
AM F KS AR + +E V F DVAG+ + + EL+E+V F E +
Sbjct: 190 AMSFGKSKARFQ----------MEAKTGVGFDDVAGIDEAKEELQEVVTFLKQPEKFTAI 239
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G +IP G+LL GPPG GKTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 240 GAKIPRGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA 299
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
K+NAP +VFIDE+DAVGR+RG+ G G ER+ TLNQLL +DGFEG +I IA+TNRP
Sbjct: 300 KENAPCLVFIDEIDAVGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRP 359
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
D+LD AL+RPGRFDR++ + P + GR IL +HA+ K + ++V A+A T G GA+
Sbjct: 360 DVLDLALLRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGAD 419
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVV 661
LAN++ AAI R + IT ++ A GM S++ R +A +E A++
Sbjct: 420 LANVLNEAAIFTARRRKEAITMAEVNDAIDRVVAGMEGTPLVDSKSKRLIAYHEVGHALI 479
Query: 662 AVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 721
P +E VT+ PR G+ G D + +++R ++ I L R A+E
Sbjct: 480 GTLCPGHDPVEKVTLIPR-GQAQGLTWFTPDE---DQSLMTRNQMIARIAGLLGGRVAEE 535
Query: 722 LWCGEGQLSTIWAETADNARSAARTFV-------LGGLSDKHFGLSNF----------WV 764
+ G+ +++T + AR V LG ++ + G NF +
Sbjct: 536 VIFGDDEVTTGAGNDIEKITYLARQMVTKLGMSSLGLVALEEEGDRNFSGGDWGKRSEYS 595
Query: 765 ADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHGS 824
D ID E I+ ++RA I++ NRNL+D +V+ L++++++ + F LVE +
Sbjct: 596 EDIAARIDREIQAIVTAAHQRATRIIEENRNLMDLLVDALIDQETIEGEHFRQLVESYQQ 655
Query: 825 LEPMP 829
+ P
Sbjct: 656 SQKQP 660
>sp|P49825|FTSH_ODOSI ATP-dependent zinc metalloprotease FtsH OS=Odontella sinensis
GN=ftsH PE=3 SV=1
Length = 644
Score = 317 bits (812), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 191/500 (38%), Positives = 279/500 (55%), Gaps = 57/500 (11%)
Query: 351 GEAEQNPHLKMAMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVK 410
G + Q+P M KS AR R G V F D+AG+ + + E EEIV
Sbjct: 159 GGSGQSP-----MSLGKSTARFERRPDTG----------VSFKDIAGIDEAKTEFEEIVS 203
Query: 411 FFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVG 470
F + Y G +IP GILL GPPG GKTLLAKA+A EA V FFS++ S+FVE+++G+G
Sbjct: 204 FLKEPDKYTIVGAKIPKGILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIG 263
Query: 471 ASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRG 530
A+RVR L+++A +NAP +VFIDE+DAVGRERG G G ER+ TLNQLL +DGF+
Sbjct: 264 AARVRDLFKKASENAPCIVFIDEIDAVGRERGAGVGGGNDEREQTLNQLLTEMDGFKENK 323
Query: 531 NVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAV 590
VI + +TNR DILD AL+RPGRFDR++ + P +GR+ ILKVHAR KP+ +DV + +
Sbjct: 324 GVIVVGATNRADILDAALLRPGRFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLVQL 383
Query: 591 ASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ 650
A+ T G GA+LAN++ AAI R ++ IT +++ +AA G+ ++ R
Sbjct: 384 ANRTPGFSGADLANLLNEAAILATRYKKSSITKNEVNEAADRIIGGIAGAPMEDTKNKRL 443
Query: 651 VAINEAAMAVVAVNFPDLKNIEFVTIAPRAG-RELGYVRMKMDHMKFKEGMLSRQSLLDH 709
+A +E A+ +E +T+ PR G + L + + D + +LSR +LL
Sbjct: 444 IAYHEVGHAITGSVLKSHDEVEKITLTPRGGAKGLTWFTPEED-----QSLLSRSALLAR 498
Query: 710 ITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFVLGGLSDKHFGLSNFW------ 763
I L RAA+++ GE +++T + + AR V FG+SN
Sbjct: 499 IITTLGGRAAEQVIFGEPEVTTGASSDLQQVTNLARQMV------TRFGMSNIGPLALED 552
Query: 764 ---------------------VADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVN 802
+ADR ID E +I+ CYE+A EI+ NR ++D +V
Sbjct: 553 ESTGQVFLGGNMASGSEYAENIADR---IDDEVRKIITYCYEKAIEIVLDNRVVIDLIVE 609
Query: 803 ELVEKKSLTKQEFFHLVELH 822
+L++K+++ EF L+ +
Sbjct: 610 KLLDKETMDGDEFRELLSTY 629
>sp|B0K5A3|FTSH1_THEPX ATP-dependent zinc metalloprotease FtsH 1 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH1 PE=3 SV=1
Length = 611
Score = 316 bits (809), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 196/445 (44%), Positives = 263/445 (59%), Gaps = 25/445 (5%)
Query: 390 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 449
V F+DVAG + + EL+EIV+F + + + G RIP G+LL GPPG GKTLLAKAVAGE
Sbjct: 158 VTFNDVAGADEEKEELQEIVEFLKYPKKFLELGARIPKGVLLVGPPGTGKTLLAKAVAGE 217
Query: 450 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 509
AGV FFSIS S FVE++VGVGA+RVR L+ +AK NAP +VFIDE+DAVGR+RG G G
Sbjct: 218 AGVPFFSISGSDFVEMFVGVGAARVRDLFDQAKKNAPCIVFIDEIDAVGRQRGAGLGGGH 277
Query: 510 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 569
ER+ TLNQLLV +DGF +I IA+TNRPDILDPAL+RPGRFDR I + P + GR
Sbjct: 278 DEREQTLNQLLVEMDGFSVNEGIIVIAATNRPDILDPALLRPGRFDRHITVGIPDIKGRE 337
Query: 570 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 629
EILK+H+R KP+A DV +A T G GA+L N++ AA+ R G +IT +L +A
Sbjct: 338 EILKIHSRNKPLAPDVSLQVLARRTPGFTGADLENLMNEAALLAARRGLKQITMAELEEA 397
Query: 630 AQIEERGMLDRKERSSETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVR 688
G R SE ++ VA +EA AVVA P+ + VTI PR GR GY
Sbjct: 398 ITRVIAGPEKRSRIMSEKDKKLVAYHEAGHAVVAKLLPNTPPVHEVTIIPR-GRAGGYTM 456
Query: 689 MKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 748
+ + K+ +S+ ++D I L R A+ L + +ST + A + AR V
Sbjct: 457 LLPEEDKY---YMSKSEMMDEIVHLLGGRVAESLVLND--ISTGAQNDIERATNIARKMV 511
Query: 749 --------LGGLS----------DKHFGLSNFWVADRINEIDTEALRILNLCYERAKEIL 790
LG ++ + G + + + EID E RI+ Y+RA+ +L
Sbjct: 512 TEYGMSERLGPMTFGTKSEEVFLGRDLGRTRNYSEEVAAEIDREIKRIIEEAYKRAESLL 571
Query: 791 QRNRNLLDAVVNELVEKKSLTKQEF 815
+ N + L V L+EK+ L +EF
Sbjct: 572 KENIDKLHRVAKALIEKEKLNGEEF 596
>sp|O19922|FTSH_CYACA ATP-dependent zinc metalloprotease FtsH OS=Cyanidium caldarium
GN=ftsH PE=3 SV=1
Length = 614
Score = 314 bits (805), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 189/470 (40%), Positives = 265/470 (56%), Gaps = 36/470 (7%)
Query: 376 YGKGLPQY-LERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGP 434
+GK ++ +E + F DVAG+ + + EL+EIV F + G IP G+LL GP
Sbjct: 153 FGKAKARFHMEAKTGIVFEDVAGIEEAKEELQEIVAFLKDSRKFTNVGATIPKGVLLVGP 212
Query: 435 PGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDEL 494
PG GKTLLAKA+AGEA FFSIS S+FVE++VGVGASRVR L+++AK+ AP +VFIDE+
Sbjct: 213 PGTGKTLLAKAIAGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDEI 272
Query: 495 DAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRF 554
DAVGR+RG+ G G ER+ TLNQLL +DGF G VI +A+TNR D+LD AL+RPGRF
Sbjct: 273 DAVGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSALLRPGRF 332
Query: 555 DRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMM 614
DR+I + P + GR+ ILKVH++KK + DV +A T G GA+LAN++ AAI +
Sbjct: 333 DRQIMVSLPNINGRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEAAILTV 392
Query: 615 RDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFV 674
R G+ EIT ++ + G+ S R +A +EA AV A P ++ V
Sbjct: 393 RRGKVEITMKEIEDSIDKIIAGLEGSPLADSRIKRLIAYHEAGHAVAATFLPHHDPVQKV 452
Query: 675 TIAP-RAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIW 733
T+ P R + L + D ++S+ +L I LA RA +E+ G +++
Sbjct: 453 TLIPRRQAKGLTWFLPNDDQF-----LVSKSQILSKIIAALAGRAMEEIVFGLPEVTIGA 507
Query: 734 AETADNARSAARTFVLGGLSDKHFGLSNF-----------------------WVADRINE 770
A AR V FG+S + + +
Sbjct: 508 ANDIKQVTFMARQMV------TKFGMSKVGPICLENSSSEVFIGRDLMGRHELSEEMVAK 561
Query: 771 IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVE 820
+D E IL CY +A+ IL +NR L+D VVNELVEK+++ +EF +VE
Sbjct: 562 VDLEVRSILKDCYIQARTILSQNRKLIDRVVNELVEKETIEAKEFMRIVE 611
>sp|A8F7F7|FTSH_THELT ATP-dependent zinc metalloprotease FtsH OS=Thermotoga lettingae
(strain ATCC BAA-301 / DSM 14385 / TMO) GN=ftsH PE=3
SV=1
Length = 626
Score = 314 bits (804), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 192/423 (45%), Positives = 254/423 (60%), Gaps = 26/423 (6%)
Query: 390 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 449
V F DVAG+ + EL+E V F + + G R+P GILL GPPG GKTLLA+AVAGE
Sbjct: 159 VTFKDVAGVDEAVEELKETVLFLKDPGRFSKIGARMPKGILLVGPPGTGKTLLARAVAGE 218
Query: 450 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 509
A V FF IS S FVE++VGVGA+RVR L+ +AK NAP +VFIDE+DAVGR RG G G
Sbjct: 219 ANVPFFHISGSDFVELFVGVGAARVRDLFNQAKANAPCIVFIDEIDAVGRHRGAGLGGGH 278
Query: 510 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 569
ER+ TLNQLLV +DGF+ R ++ +A+TNRPDILDPAL+RPGRFD+K+ + P + GR
Sbjct: 279 DEREQTLNQLLVEMDGFDVRQGIVVMAATNRPDILDPALLRPGRFDKKVVLDTPDVRGRE 338
Query: 570 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 629
EILK+HAR KP+A+DVD +A T G VGA+L N+V AA+ R+GR +I +D +A
Sbjct: 339 EILKIHARNKPIAEDVDIRVLAQRTTGFVGADLENLVNEAALLAARNGRDKIKMEDFEEA 398
Query: 630 AQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYV 687
G RK R S R VA +E A+V+ P+ + ++I PR R LGY
Sbjct: 399 IDRVIAGPA-RKSRVISPREKRIVAYHEVGHAIVSSLLPNADPVHRISIIPRGYRALGYT 457
Query: 688 RMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTF 747
++ ++++Q LLD IT L RAA+EL E ++T A + A AR
Sbjct: 458 LQLPAEDRY---LVTKQELLDQITGLLGGRAAEELIFQE--VTTGAASDIERATELARRM 512
Query: 748 VLG-GLSDKHFGLS-----------------NFWVADRINEIDTEALRILNLCYERAKEI 789
V G+SDK LS + + +EID E +I+ Y+RAKEI
Sbjct: 513 VCQFGMSDKLGPLSWGKTEQEIFLGKELTRMRNYSEEVASEIDEEVRKIVTESYDRAKEI 572
Query: 790 LQR 792
L +
Sbjct: 573 LTK 575
>sp|Q1D491|FTSH_MYXXD ATP-dependent zinc metalloprotease FtsH OS=Myxococcus xanthus
(strain DK 1622) GN=ftsH PE=3 SV=1
Length = 638
Score = 313 bits (801), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 199/496 (40%), Positives = 275/496 (55%), Gaps = 34/496 (6%)
Query: 363 MQFMKSGARVRRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
M+ ++ G+ +GK + L E V F+DVAG + + ELEEIV F + + +
Sbjct: 124 MRQLQGGSGKAMTFGKSKAKLLSESHNKVTFADVAGADECKEELEEIVAFLKDPKKFTKL 183
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G RIP G+L+ G PG GKTLLA+AVAGEAGV FFSIS S FVE++VGVGASRVR L+++
Sbjct: 184 GGRIPKGVLMMGSPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQG 243
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
K NAP ++FIDE+DAVGR RG G G ER+ TLNQLLV +DGFE VI IA+TNRP
Sbjct: 244 KKNAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNDGVILIAATNRP 303
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
D+LDPAL RPGRFDR+I +P+P + GR+ +LKVH R+ P+A +VD +A T GM GA+
Sbjct: 304 DVLDPALQRPGRFDRRIVVPRPDVKGRLGVLKVHTRRVPLAPEVDLEVIARGTPGMTGAD 363
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQ-----IEERGMLDRKERSSETWRQVAINEA 656
L N+V +A+ R + + D A E R M+ ++ T A++EA
Sbjct: 364 LENLVNESALMAARQNKERVDLSDFEAAKDKVFMGPERRSMIMTEKEKKNT----AVHEA 419
Query: 657 AMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAP 716
A++A P + VTI PR G+ LG K ++ +LD I++ +
Sbjct: 420 GHALLAKLLPGCDPLHKVTIIPR-GQALGVTWSLPTEDKVNG---YKKQMLDQISMAMGG 475
Query: 717 RAADELWCGEGQLSTIWAETADNARSAARTFVL-GGLSDK-----------------HFG 758
R A+EL E +S+ A + A AR V G+S+K F
Sbjct: 476 RIAEELMFNE--MSSGAANDIERATETARAMVCRWGMSEKMGPLAFGKSDGEVFLGRDFN 533
Query: 759 LSNFWVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHL 818
S + D +ID E I+ CYER K +L N L V + LVE ++L ++ L
Sbjct: 534 SSKDYSEDTARQIDAEVRNIVVGCYERGKNLLTENIEALRRVSDALVEYETLDAEDVNIL 593
Query: 819 VELHGSLEPMPPSIVD 834
++ PP V+
Sbjct: 594 LQGGQLTRERPPPRVN 609
>sp|P94304|FTSH_BACPE ATP-dependent zinc metalloprotease FtsH OS=Bacillus pseudofirmus
(strain OF4) GN=ftsH PE=3 SV=2
Length = 679
Score = 313 bits (801), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 195/455 (42%), Positives = 261/455 (57%), Gaps = 38/455 (8%)
Query: 391 KFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEA 450
KF DVAG + + EL E+V+F + G RIP G+LL GPPG GKTLLA+AVAGEA
Sbjct: 164 KFKDVAGADEEKQELVEVVEFLKDPRKFSAIGARIPKGVLLVGPPGTGKTLLARAVAGEA 223
Query: 451 GVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQ 510
GV FFSIS S FVE++VGVGASRVR L++ AK NAP ++FIDE+DAVGR+RG G G
Sbjct: 224 GVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHD 283
Query: 511 ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRME 570
ER+ TLNQLLV +DGF +I IA+TNR DILDPAL+RPGRFDR+I + +P + GR E
Sbjct: 284 EREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREE 343
Query: 571 ILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEIT------TD 624
+LKVHAR KP+ DDV+ +A+ T G GA+L N++ AA+ R T+I+
Sbjct: 344 VLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAALVAARHDHTKISMIHIEEAI 403
Query: 625 DLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 684
D + A ++ ++ KE+ W +EA VV V + + VTI PR G
Sbjct: 404 DRVIAGPAKKSRVISPKEKKIVAW-----HEAGHTVVGVKLENADMVHKVTIVPR-GMAG 457
Query: 685 GYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAA 744
GY M ++ +++ LLD I L R A+E+ GE +ST A A
Sbjct: 458 GYAVMLPKEDRY---FMTQPELLDKIIGLLGGRVAEEVTFGE--VSTGAHNDFQRATGIA 512
Query: 745 RTFVLG-GLSDKHFGLSNFW------------------VADRI-NEIDTEALRILNLCYE 784
R V G+S+K G F +D I +EID E RI+ CY
Sbjct: 513 RKMVTEYGMSEK-LGPMQFISGSGGQVFLGRDIQNEQNYSDAIAHEIDLEVQRIIKECYA 571
Query: 785 RAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 819
R K+IL N++ LD V L++ ++L ++ LV
Sbjct: 572 RCKQILLENKDSLDLVAKTLLDMETLDAEQIKSLV 606
>sp|P51327|FTSH_PORPU ATP-dependent zinc metalloprotease FtsH OS=Porphyra purpurea
GN=ftsH PE=3 SV=1
Length = 628
Score = 311 bits (798), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 195/482 (40%), Positives = 279/482 (57%), Gaps = 43/482 (8%)
Query: 362 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
AM F KS K L Q +E V F+DVAG+ + + E +E+V F E +
Sbjct: 152 AMSFGKS---------KALFQ-MEAKTGVVFNDVAGVEEAKEEFQEVVTFLKQPESFTAV 201
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G +IP G+LL GPPG GKTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 202 GAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA 261
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
KDNAP +VFIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG VI IA+TNR
Sbjct: 262 KDNAPCIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRA 321
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
DILD AL+RPGRFDR++ + P GR+ IL+VHA+ K M V +A T G GA+
Sbjct: 322 DILDSALLRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGAD 381
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQA-----AQIEERGMLDRKERSSETWRQVAINEA 656
LAN++ AAI R ++ +T ++ + A +E ++D K + R +A +E
Sbjct: 382 LANLLNEAAILTARRRKSAMTMSEIDTSIDRVVAGLEGTPLIDSKSK-----RLIAYHEV 436
Query: 657 AMAVVAVNFPDLKNIEFVTIAPRA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLA 715
A++ ++ VT+ PR R L + D + ++SR +L I L
Sbjct: 437 GHAIIGSLLEHHDPVQKVTLIPRGQARGLTWFTPSDD-----QSLISRSQILARIVGALG 491
Query: 716 PRAADELWCGEGQLSTIWAETADNARSAARTFV-------LGGLSDKHFGLSNFW----- 763
RAA+E+ G+ +++T + S AR V +G LS + G F
Sbjct: 492 GRAAEEIIFGDAEVTTGASNDLQQVTSMARQMVTRFGMSKIGPLSLESQGSDPFLGRGMG 551
Query: 764 ----VADRI-NEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHL 818
+D + ID + I++ CY+ AK+I++ NR ++D +V+ L+EK+++ EF H+
Sbjct: 552 GGSEYSDEVATNIDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEFRHI 611
Query: 819 VE 820
V+
Sbjct: 612 VK 613
>sp|O69076|FTSH_STRPN ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=ftsH PE=3
SV=3
Length = 652
Score = 311 bits (797), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 190/451 (42%), Positives = 268/451 (59%), Gaps = 26/451 (5%)
Query: 388 VDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVA 447
+ V+FSDVAG + + EL E+V+F + + + G RIP G+LL GPPG GKTLLAKAVA
Sbjct: 182 IKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVA 241
Query: 448 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 507
GEAGV FFSIS S FVE++VGVGASRVRSL+++AK AP+++FIDE+DAVGR+RG+ G
Sbjct: 242 GEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGG 301
Query: 508 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 567
G ER+ TLNQLL+ +DGFEG +I IA+TNR D+LDPAL+RPGRFDRK+ + +P + G
Sbjct: 302 GNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKG 361
Query: 568 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 627
R ILKVHA+ KP+A+DVD VA T G VGA+L N++ AA+ R ++ I D+
Sbjct: 362 REAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDID 421
Query: 628 QAAQIEERGMLDRKERSSETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGY 686
+A G + + S+ R+ VA +EA +V + + + + VTI PR GR GY
Sbjct: 422 EAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPR-GRAGGY 480
Query: 687 VRM--KMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAA 744
+ K D M +LS++ + + + + R A+E+ +T + + A A
Sbjct: 481 MIALPKEDQM-----LLSKEDMKEQLAGLMGGRVAEEIIF--NVQTTGASNDFEQATQMA 533
Query: 745 RTFVLG-GLSDK---------HFGLSNFWVADRIN-----EIDTEALRILNLCYERAKEI 789
R V G+S+K H L I+ EID E +LN +A EI
Sbjct: 534 RAMVTEYGMSEKLGPVQYEGNHAMLGAQSPQKSISEQTAYEIDEEVRSLLNEARNKAAEI 593
Query: 790 LQRNRNLLDAVVNELVEKKSLTKQEFFHLVE 820
+Q NR + L++ ++L + L E
Sbjct: 594 IQSNRETHKLIAEALLKYETLDSTQIKALYE 624
>sp|Q9FH02|FTSH5_ARATH ATP-dependent zinc metalloprotease FTSH 5, chloroplastic
OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1
Length = 704
Score = 311 bits (797), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/457 (40%), Positives = 262/457 (57%), Gaps = 38/457 (8%)
Query: 390 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 449
V F DVAG + +LEL+E+V F + + Y G +IP G LL GPPG GKTLLA+AVAGE
Sbjct: 247 VTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 306
Query: 450 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 509
AGV FFS +AS+FVE++VGVGASRVR L+++AK AP +VFIDE+DAVGR+RG G G
Sbjct: 307 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGN 366
Query: 510 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 569
ER+ T+NQLL +DGF G VI +A+TNRPD+LD AL+RPGRFDR++ + +P + GR+
Sbjct: 367 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV 426
Query: 570 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 629
+ILKVH+R K + DVDY VA T G GA+L N++ AAI R EI+ D++ A
Sbjct: 427 QILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDA 486
Query: 630 AQIEERGMLDRKER----SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG 685
ER + +++ S E R VA +EA A+V P+ + ++I PR G+ G
Sbjct: 487 L---ERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGG 542
Query: 686 YVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAAR 745
+ + G+ SR L + + V L R A+E+ G+ ++T + AR
Sbjct: 543 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVAR 602
Query: 746 TFVLGGLSDKHFGLS-------------NFWVADRINE-----------IDTEALRILNL 781
V + FG S N ++ ++ +D E ++
Sbjct: 603 QMV------ERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRELVEK 656
Query: 782 CYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHL 818
Y RAKEI+ ++L + L+EK+++ +EF L
Sbjct: 657 AYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSL 693
>sp|P59652|FTSH_STRR6 ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1
Length = 652
Score = 311 bits (797), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 191/452 (42%), Positives = 268/452 (59%), Gaps = 28/452 (6%)
Query: 388 VDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVA 447
+ V+FSDVAG + + EL E+V+F + + + G RIP G+LL GPPG GKTLLAKAVA
Sbjct: 182 IKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVA 241
Query: 448 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 507
GEAGV FFSIS S FVE++VGVGASRVRSL+++AK AP+++FIDE+DAVGR+RG+ G
Sbjct: 242 GEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGG 301
Query: 508 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 567
G ER+ TLNQLL+ +DGFEG +I IA+TNR D+LDPAL+RPGRFDRK+ + +P + G
Sbjct: 302 GNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKG 361
Query: 568 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 627
R ILKVHA+ KP+A+DVD VA T G VGA+L N++ AA+ R ++ I D+
Sbjct: 362 REAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDID 421
Query: 628 QAAQIEERGMLDRKERSSETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGY 686
+A G + + S+ R+ VA +EA +V + + + + VTI PR GR GY
Sbjct: 422 EAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPR-GRAGGY 480
Query: 687 VRM--KMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETA-DNARSA 743
+ K D M +LS++ + + + + R A+E+ + T A + A
Sbjct: 481 MIALPKEDQM-----LLSKEDMKEQLAGLMGGRVAEEIIF---NVQTTGASNDFEQATQM 532
Query: 744 ARTFVLG-GLSDK---------HFGLSNFWVADRIN-----EIDTEALRILNLCYERAKE 788
AR V G+S+K H L I+ EID E +LN +A E
Sbjct: 533 ARAMVTEYGMSEKLGPVQYEGNHAMLGAQSPQKSISEQTAYEIDEEVRSLLNEARNKAAE 592
Query: 789 ILQRNRNLLDAVVNELVEKKSLTKQEFFHLVE 820
I+Q NR + L++ ++L + L E
Sbjct: 593 IIQSNRETHKLIAEALLKYETLDSTQIKALYE 624
>sp|D1CDT8|FTSH_THET1 ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum
(strain ATCC BAA-798 / YNP1) GN=ftsH PE=3 SV=1
Length = 646
Score = 311 bits (796), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 188/459 (40%), Positives = 265/459 (57%), Gaps = 26/459 (5%)
Query: 390 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 449
V F DVAG+ + + EL EIV F + + Y+R G IP G+LL GPPG GKTLLA+AVAGE
Sbjct: 194 VTFDDVAGIEEAKQELAEIVDFLKNPQKYQRLGGTIPKGVLLIGPPGTGKTLLARAVAGE 253
Query: 450 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 509
AGV FFS+S S+FVE+ VGVGA+RVR L+Q+AK AP ++F+DELDA+GR RG GG
Sbjct: 254 AGVPFFSMSGSEFVEMIVGVGAARVRELFQQAKKEAPCIIFVDELDAIGRRRGSSINVGG 313
Query: 510 Q-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 568
ER+ TLNQLLV +DGF+ R VI +A+TNRPD+LDPAL+RPGRFDR++ + +P +GR
Sbjct: 314 HDEREQTLNQLLVEMDGFDSRQGVIVLAATNRPDVLDPALLRPGRFDRRVVVQRPDKVGR 373
Query: 569 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 628
++IL+VH R P+ ++D +A+ T G+VGA+L N+V AA+ R G+ + +D
Sbjct: 374 LKILQVHTRNVPLDPNLDLSEIAAATPGLVGADLRNLVNEAALLAARRGKNYVDREDFFD 433
Query: 629 AAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVR 688
A + G + S E R+VA +E+ A++ + P+ + VTI PR G+ LG
Sbjct: 434 ALEKITLGAERKLLISEEDRRRVAYHESGHALLGLLLPEADPVHKVTIIPR-GQALGVTY 492
Query: 689 MKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 748
+ ++ + + L IT L RAA+EL G ++T AR V
Sbjct: 493 QTPEDDRYN---YTERYLRSRITAALGGRAAEELVF--GTVTTGAENDLKQVTEIARQMV 547
Query: 749 LGGLSDKHFGL--------SNFWVADRINE----------IDTEALRILNLCYERAKEIL 790
K GL +F + I ID E RI++ CY A +L
Sbjct: 548 TRWGMSKEVGLVYLSPDGQEDFLGPNPITSREYSESLATVIDRETRRIIDECYAEALSLL 607
Query: 791 QRNRNLLDAVVNELVEKKSLTKQEFFHLVELHGSLEPMP 829
R R LD + L+ ++SL +Q+ +V L G +P P
Sbjct: 608 NRERQRLDNLAEALLREESLDEQQIREIVGL-GEKQPEP 645
>sp|P0C5C0|FTSH_MYCTU ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium
tuberculosis GN=ftsH PE=1 SV=1
Length = 760
Score = 310 bits (794), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 197/473 (41%), Positives = 271/473 (57%), Gaps = 32/473 (6%)
Query: 366 MKSGARVRRAYGKGLPQYLERGVD-VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVR 424
M+ GAR+ +GK + L + + F+DVAG+ + EL EI F + Y+ G +
Sbjct: 135 MQGGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAK 194
Query: 425 IPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDN 484
IP G+LL GPPG GKTLLA+AVAGEAGV FF+IS S FVE++VGVGASRVR L+++AK N
Sbjct: 195 IPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQN 254
Query: 485 APSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDIL 544
+P ++F+DE+DAVGR+RG G G ER+ TLNQLLV +DGF R VI IA+TNRPDIL
Sbjct: 255 SPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDIL 314
Query: 545 DPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELAN 604
DPAL+RPGRFDR+I + P L GR +L+VH++ KPMA D D +A T GM GA+LAN
Sbjct: 315 DPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLAN 374
Query: 605 IVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVA 662
++ AA+ R+ T IT L +A G RK R S + + A +E + A
Sbjct: 375 VINEAALLTARENGTVITGPALEEAVD-RVIGGPRRKGRIISEQEKKITAYHEGGHTLAA 433
Query: 663 VNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 722
PD++ I VTI R GR G+ + K G+ +R ++ + + RAA+EL
Sbjct: 434 WAMPDIEPIYKVTILAR-GRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEEL 489
Query: 723 WCGE---GQLSTIWAETADNARSAARTFVLGGLSDK-----------------HFGLSNF 762
E G +S I + ARS F G+S K G
Sbjct: 490 VFREPTTGAVSDI-EQATKIARSMVTEF---GMSSKLGAVKYGSEHGDPFLGRTMGTQPD 545
Query: 763 WVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEF 815
+ + EID E +++ + A EIL R++LD + EL+EK++L + E
Sbjct: 546 YSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPEL 598
>sp|A5U8T5|FTSH_MYCTA ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=ftsH PE=3
SV=1
Length = 760
Score = 310 bits (794), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 197/473 (41%), Positives = 271/473 (57%), Gaps = 32/473 (6%)
Query: 366 MKSGARVRRAYGKGLPQYLERGVD-VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVR 424
M+ GAR+ +GK + L + + F+DVAG+ + EL EI F + Y+ G +
Sbjct: 135 MQGGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAK 194
Query: 425 IPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDN 484
IP G+LL GPPG GKTLLA+AVAGEAGV FF+IS S FVE++VGVGASRVR L+++AK N
Sbjct: 195 IPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQN 254
Query: 485 APSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDIL 544
+P ++F+DE+DAVGR+RG G G ER+ TLNQLLV +DGF R VI IA+TNRPDIL
Sbjct: 255 SPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDIL 314
Query: 545 DPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELAN 604
DPAL+RPGRFDR+I + P L GR +L+VH++ KPMA D D +A T GM GA+LAN
Sbjct: 315 DPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLAN 374
Query: 605 IVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVA 662
++ AA+ R+ T IT L +A G RK R S + + A +E + A
Sbjct: 375 VINEAALLTARENGTVITGPALEEAVD-RVIGGPRRKGRIISEQEKKITAYHEGGHTLAA 433
Query: 663 VNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 722
PD++ I VTI R GR G+ + K G+ +R ++ + + RAA+EL
Sbjct: 434 WAMPDIEPIYKVTILAR-GRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEEL 489
Query: 723 WCGE---GQLSTIWAETADNARSAARTFVLGGLSDK-----------------HFGLSNF 762
E G +S I + ARS F G+S K G
Sbjct: 490 VFREPTTGAVSDI-EQATKIARSMVTEF---GMSSKLGAVKYGSEHGDPFLGRTMGTQPD 545
Query: 763 WVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEF 815
+ + EID E +++ + A EIL R++LD + EL+EK++L + E
Sbjct: 546 YSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPEL 598
>sp|P0A4V9|FTSH_MYCBO ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=ftsH PE=3 SV=1
Length = 760
Score = 310 bits (794), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 197/473 (41%), Positives = 271/473 (57%), Gaps = 32/473 (6%)
Query: 366 MKSGARVRRAYGKGLPQYLERGVD-VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVR 424
M+ GAR+ +GK + L + + F+DVAG+ + EL EI F + Y+ G +
Sbjct: 135 MQGGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAK 194
Query: 425 IPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDN 484
IP G+LL GPPG GKTLLA+AVAGEAGV FF+IS S FVE++VGVGASRVR L+++AK N
Sbjct: 195 IPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQN 254
Query: 485 APSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDIL 544
+P ++F+DE+DAVGR+RG G G ER+ TLNQLLV +DGF R VI IA+TNRPDIL
Sbjct: 255 SPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDIL 314
Query: 545 DPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELAN 604
DPAL+RPGRFDR+I + P L GR +L+VH++ KPMA D D +A T GM GA+LAN
Sbjct: 315 DPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLAN 374
Query: 605 IVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVA 662
++ AA+ R+ T IT L +A G RK R S + + A +E + A
Sbjct: 375 VINEAALLTARENGTVITGPALEEAVD-RVIGGPRRKGRIISEQEKKITAYHEGGHTLAA 433
Query: 663 VNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 722
PD++ I VTI R GR G+ + K G+ +R ++ + + RAA+EL
Sbjct: 434 WAMPDIEPIYKVTILAR-GRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEEL 489
Query: 723 WCGE---GQLSTIWAETADNARSAARTFVLGGLSDK-----------------HFGLSNF 762
E G +S I + ARS F G+S K G
Sbjct: 490 VFREPTTGAVSDI-EQATKIARSMVTEF---GMSSKLGAVKYGSEHGDPFLGRTMGTQPD 545
Query: 763 WVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEF 815
+ + EID E +++ + A EIL R++LD + EL+EK++L + E
Sbjct: 546 YSHEVAREIDEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPEL 598
>sp|O78516|FTSH_GUITH ATP-dependent zinc metalloprotease FtsH OS=Guillardia theta GN=ftsH
PE=3 SV=1
Length = 631
Score = 309 bits (792), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 190/489 (38%), Positives = 275/489 (56%), Gaps = 36/489 (7%)
Query: 362 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
AM F KS AR + +E V F+DVAG+ + + E EE+V F E +
Sbjct: 152 AMNFGKSKARFQ----------MEAKTGVTFNDVAGVDEAKEEFEEVVSFLKKPERFTAV 201
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G +IP G+LL GPPG GKTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 202 GAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA 261
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
K+N+P +VFIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I IA+TNR
Sbjct: 262 KENSPCIVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRV 321
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
D+LD AL+RPGRFDR++ + P + GR+EIL VHAR K + + +A T G GA+
Sbjct: 322 DVLDAALLRPGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGAD 381
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVV 661
LAN++ AAI R + +IT ++ + GM + S+T R +A +E A++
Sbjct: 382 LANLLNEAAILTARRRKKQITISEIDASIDRVIAGMEGKALVDSKTKRLIAYHEVGHAII 441
Query: 662 AVNFPDLKNIEFVTIAPRA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAAD 720
++ VT+ PR + L + D + ++SR +L I L RAA+
Sbjct: 442 GTLLKHHDPVQKVTLVPRGQAKGLTWFTPSED-----QSLISRSQILARIMGALGGRAAE 496
Query: 721 ELWCGEGQLSTIWAETADNARSAARTFV-------LGGLS----------DKHFGLSNFW 763
E+ G +++T S AR V +G LS + G S+ +
Sbjct: 497 EVVFGLPEVTTGAGNDLQQVTSMARQMVTRFGMSNIGPLSLESQNSDPFLGRTMGSSSQY 556
Query: 764 VADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELHG 823
D + ID + I+ C+ +I++ NR ++D +V+ L+EK+++ EF +V G
Sbjct: 557 SEDIASRIDMQVRAIIQHCHTETVQIIKDNRVVIDKLVDLLIEKETIDGDEFRQIV---G 613
Query: 824 SLEPMPPSI 832
+P I
Sbjct: 614 DFTSLPEKI 622
>sp|B9MPK5|FTSH_CALBD ATP-dependent zinc metalloprotease FtsH OS=Caldicellulosiruptor
bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320)
GN=ftsH PE=3 SV=1
Length = 616
Score = 309 bits (792), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 199/449 (44%), Positives = 264/449 (58%), Gaps = 25/449 (5%)
Query: 390 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 449
V F+DVAG + + EL+E++ F + Y G RIP GILL GPPG GKTLLAKAVAGE
Sbjct: 165 VTFADVAGADEEKEELKEVIDFLKNPRKYIELGARIPKGILLVGPPGTGKTLLAKAVAGE 224
Query: 450 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 509
AGV FFSIS S FVE++VGVGA+RVR L+ +AK NAP VVFIDE+DAVGR RG G G
Sbjct: 225 AGVPFFSISGSDFVEMFVGVGAARVRDLFDQAKRNAPCVVFIDEIDAVGRHRGAGLGGGH 284
Query: 510 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 569
ER+ TLNQLLV +DGF +I +A+TNRPDILDPAL+RPGRFDR+I + P R
Sbjct: 285 DEREQTLNQLLVEMDGFGTNEGIIVMAATNRPDILDPALLRPGRFDRQIVVNVPDAKARE 344
Query: 570 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 629
EILKVHAR KP+ +DVD +A +T G GA+L N++ AA+ R G+ +I +++ +A
Sbjct: 345 EILKVHARNKPLGEDVDLSQIAKITAGFTGADLENLLNEAALLAARKGKRQINMEEVQEA 404
Query: 630 AQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVR 688
G R +E +++ A +EA A+V PD + + V+I PR G GY
Sbjct: 405 VAKVLMGPEKRSRVYTEKEKKLTAYHEAGHAIVRTMIPDSEPVHEVSIIPR-GYAGGYTM 463
Query: 689 MKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV 748
KF S+ ++ I L R A++L + +ST A A AR V
Sbjct: 464 YLPKEDKF---YASKSDMMREIVTLLGGRVAEKLVLED--VSTGAASDIKRATKIARDMV 518
Query: 749 LG-GLSDK----HFG-------------LSNFWVADRINEIDTEALRILNLCYERAKEIL 790
G+SDK FG L+ + + EID E I+ Y++A+EIL
Sbjct: 519 TKYGMSDKLGPMTFGTEQEEVFLGRDLALARNYSEEVAAEIDREIKSIIEEAYKKAEEIL 578
Query: 791 QRNRNLLDAVVNELVEKKSLTKQEFFHLV 819
++N + L V N L+EK+ LT +EF LV
Sbjct: 579 KQNIDKLHKVANALLEKEKLTGEEFRKLV 607
>sp|Q39102|FTSH1_ARATH ATP-dependent zinc metalloprotease FTSH 1, chloroplastic
OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2
Length = 716
Score = 308 bits (790), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 179/457 (39%), Positives = 265/457 (57%), Gaps = 38/457 (8%)
Query: 390 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 449
V F+DVAG + +LEL+E+V F + + Y G +IP G LL GPPG GKTLLA+AVAGE
Sbjct: 259 VSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 318
Query: 450 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 509
AGV FFS +AS+FVE++VGVGASRVR L+++AK AP +VFIDE+DAVGR+RG G G
Sbjct: 319 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGN 378
Query: 510 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 569
ER+ T+NQLL +DGF G VI +A+TNRPD+LD AL+RPGRFDR++ + +P + GR+
Sbjct: 379 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV 438
Query: 570 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 629
+IL+VH+R K + DVD+ VA T G GA+L N++ AAI R EI+ D++ A
Sbjct: 439 KILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDA 498
Query: 630 AQIEERGMLDRKER----SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG 685
ER + +++ S E R VA +EA A+V P+ + ++I PR G+ G
Sbjct: 499 L---ERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGG 554
Query: 686 YVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAAR 745
+ + G+ SR L + + V L R A+E+ G+ ++T + AR
Sbjct: 555 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVAR 614
Query: 746 TFVLGGLSDKHFGLS-------------NFWVADRINE-----------IDTEALRILNL 781
+ + FG S N ++ +++ +D E ++
Sbjct: 615 QMI------ERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMATADIVDAEVRELVEK 668
Query: 782 CYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHL 818
Y+RA EI+ + ++L + L+EK+++ +EF L
Sbjct: 669 AYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSL 705
>sp|Q0TTK8|FTSH_CLOP1 ATP-dependent zinc metalloprotease FtsH OS=Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A) GN=ftsH PE=3
SV=1
Length = 717
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 185/475 (38%), Positives = 284/475 (59%), Gaps = 36/475 (7%)
Query: 363 MQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 422
M F K+ A++ Y E + F DVAG + + L EIV F Y G
Sbjct: 146 MSFGKNNAKL----------YAENETGITFKDVAGQDEAKESLVEIVDFLHDTRKYVEIG 195
Query: 423 VRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 482
++P G LL GPPG GKTLLAKAVAGEA V FFS+S S FVE++VG+GA+RVR L+++A+
Sbjct: 196 AKLPKGALLVGPPGTGKTLLAKAVAGEAKVPFFSMSGSDFVEMFVGMGAARVRDLFKQAE 255
Query: 483 DNAPSVVFIDELDAVGRER-GLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
+ AP +VFIDE+DA+G+ R G I+G+ ER+ TLNQLL +DGF+ V+ +A+TNRP
Sbjct: 256 EKAPCIVFIDEIDAIGKSRDGAIQGN--DEREQTLNQLLTEMDGFDSSKGVVILAATNRP 313
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
++LD AL+RPGRFDR+I + +P LIGR EILKVH+R ++DDV +A T G VGA+
Sbjct: 314 EVLDKALLRPGRFDRRIIVDRPDLIGREEILKVHSRDVKLSDDVSLEEIAKSTPGAVGAD 373
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMA 659
LANIV AA+ ++ GR + +DL +A ++ G ++++R S + + VA +E A
Sbjct: 374 LANIVNEAALRAVKHGRKFVIQEDLDEAVEVIIAGQ-EKRDRILSPKEKKIVAYHEVGHA 432
Query: 660 VVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAA 719
+VA + + +TI PR LGY + K+ ++S++ ++D I+V L RAA
Sbjct: 433 LVAALLNNTDPVHKITIVPRTMGALGYTMQLPEEEKY---LVSKEEMIDQISVMLGGRAA 489
Query: 720 DELWCGEGQLSTIWAETADNARSAARTFV-LGGLSDKHF-----GLSNFWVADR----IN 769
+E+ ++T + + A +AR + + G+S++ +SN ++ R +
Sbjct: 490 EEVVF--NSITTGASNDIERATQSARNMITIYGMSERFDMMALEAMSNRYLDGRPVRNCS 547
Query: 770 EI-----DTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 819
E D E L+++ +E++ +IL NR LLD + L++K+++ EF +V
Sbjct: 548 ETTAAIADEEVLQVIKKAHEKSIKILIENRELLDEITGVLLDKETIMGDEFMEIV 602
>sp|C5CES8|FTSH_KOSOT ATP-dependent zinc metalloprotease FtsH OS=Kosmotoga olearia
(strain TBF 19.5.1) GN=ftsH PE=3 SV=1
Length = 645
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 192/480 (40%), Positives = 278/480 (57%), Gaps = 36/480 (7%)
Query: 362 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
A F KS A+ +YL +V F DVAG+ + EL++ V + + + +
Sbjct: 143 AFTFTKSPAK----------KYLSNDKNVTFKDVAGVDEAIEELQDAVNYLKNPNAFSQT 192
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G R+P GILL GPPG GKTLLA+AVAGEA V FF IS S FVE++VGVGA+RVR L+ +A
Sbjct: 193 GARMPKGILLVGPPGTGKTLLARAVAGEANVPFFYISGSDFVELFVGVGAARVRDLFSQA 252
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
K +APS++FIDE+DAVGR RG G G ER+ TLNQ+LV +DGF+ + VI +A+TNRP
Sbjct: 253 KASAPSIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQILVEMDGFDAKTGVIVMAATNRP 312
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
DILD AL+RPGRFD+KI + P + GR EILK+H R KP+ DVD +A T G VGA+
Sbjct: 313 DILDHALLRPGRFDKKITVDPPDVKGRAEILKIHMRGKPVDPDVDVWLLARRTPGFVGAD 372
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMA 659
L N+V AAI R + I +L +A G RK R + + + VA +E A
Sbjct: 373 LENLVNEAAILAARRKKKIIGMKELEEAIDRVIAGPA-RKSRIMNPKEKKIVAYHELGHA 431
Query: 660 VVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAA 719
+V + P+ + VT+ PR LG+ ++ ++SR +LD++ L RAA
Sbjct: 432 IVGLALPNAYPVHKVTVIPRGSASLGFTESLPSEDRY---LVSRSEMLDNLAQILGGRAA 488
Query: 720 DELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGLS-----------------N 761
+E+ GE ++T A + A ART V G+SD+ ++
Sbjct: 489 EEIVFGE--ITTGAANDLERATQMARTMVCQLGMSDRLGPIAWGKEEGEVFLGRELTRMR 546
Query: 762 FWVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVEL 821
+ + +EID E +I+ +ERA++++++ R+ LD L+EK+++T +E +V L
Sbjct: 547 NYSEEIASEIDNEVKKIVIEAHERARKLVEKFRDKLDKAAEYLIEKETITGKELAEIVGL 606
>sp|D3F124|FTSH1_CONWI ATP-dependent zinc metalloprotease FtsH 1 OS=Conexibacter woesei
(strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)
GN=ftsH1 PE=3 SV=1
Length = 653
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 193/457 (42%), Positives = 273/457 (59%), Gaps = 39/457 (8%)
Query: 390 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 449
+ F DVAG + EL EI +F + + ++ G RIP G+LL GPPG GKTLLA+AVAGE
Sbjct: 155 ITFRDVAGADEAVEELHEIKEFLENPKKFQALGARIPKGVLLYGPPGTGKTLLARAVAGE 214
Query: 450 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 509
AGV FFSIS S FVE++VGVGASRVR L+++AK NAP ++F+DE+DAVGR RG G G
Sbjct: 215 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKQNAPCIIFMDEIDAVGRHRGAGMGGGH 274
Query: 510 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 569
ER+ TLNQLLV +DGFE + N+I IA+TNRPDILDPAL+RPGRFDR++ + +P GR
Sbjct: 275 DEREQTLNQLLVEMDGFEAKDNIIMIAATNRPDILDPALLRPGRFDRQVTVDRPDRKGRS 334
Query: 570 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 629
+IL+VH R KP+A ++D A+A T G GA+LAN+V AA+ R G+ EIT +L
Sbjct: 335 KILEVHTRGKPLAREIDIDALAGQTPGFTGADLANLVNEAALLAARTGKREITQVEL--- 391
Query: 630 AQIEERGML------DRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAG 681
E G++ ++K R SSE R A +E A+V + +++ R G
Sbjct: 392 ----EEGIMRVIAGPEKKTRVMSSEERRITAYHEMGHALVGHFLEHADPVHKISVIGR-G 446
Query: 682 RELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNAR 741
+ LGY KF + +R +L D + + L RAA+E+ GE ++T + +
Sbjct: 447 QALGYTISMPQEDKF---LTTRAALGDTMAMTLGGRAAEEIIFGE--ITTGASNDLEKVT 501
Query: 742 SAARTFVL-GGLSDKH----FGL------------SNFWVADRI-NEIDTEALRILNLCY 783
A+ V+ G+S+K FG S +D I EID E RI+ +
Sbjct: 502 GTAKQMVMRFGMSEKLGPRVFGHDQSQPFLGREFSSQADYSDEIAREIDDEIRRIVETAH 561
Query: 784 ERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVE 820
+ AK+IL +R L + L++++++ K +F LV+
Sbjct: 562 QSAKDILTEHRESLVYISEILIKRETIEKDQFEALVD 598
>sp|Q9CD58|FTSH_MYCLE ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium leprae
(strain TN) GN=ftsH PE=3 SV=1
Length = 787
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 199/474 (41%), Positives = 273/474 (57%), Gaps = 34/474 (7%)
Query: 366 MKSGARVRRAYGKGLPQYLERGVD-VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVR 424
M+ GAR+ +GK + L + + F+DVAG+ + EL EI F + Y+ G +
Sbjct: 135 MQGGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPCRYQTLGAK 194
Query: 425 IPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDN 484
IP G+LL GPPG GKTLLA+AVAGEAGV FF+IS S FVE++VGVGASRVR L+ +AK N
Sbjct: 195 IPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQN 254
Query: 485 APSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDIL 544
+P ++F+DE+DAVGR+RG G G ER+ TLNQLLV +DGF R VI IA+TNRPDIL
Sbjct: 255 SPCIIFVDEIDAVGRQRGTGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDIL 314
Query: 545 DPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELAN 604
DPAL+RPGRFDR+I + P L GR +L+VH++ KP+ADD D +A T GM GA+LAN
Sbjct: 315 DPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPIADDADLDGLAKRTVGMTGADLAN 374
Query: 605 IVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVA 662
+V AA+ R+ IT L +A G RK R S + + A +E + A
Sbjct: 375 VVNEAALLTARENGLVITGPALEEAVD-RVIGGPRRKGRIISEQEKKITAYHEGGHTLAA 433
Query: 663 VNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 722
PD++ I VTI R GR G+ + K G+ +R ++ + + RAA+EL
Sbjct: 434 WAMPDIEPIYKVTILAR-GRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEEL 489
Query: 723 WCGE---GQLSTIWAETADNARSAARTFV--------LGGL------SDKHFGLSNFWVA 765
E G +S I + A AR+ V LG + D G + A
Sbjct: 490 VFREPTTGAVSDI-----EKATKIARSMVTEFGMSSKLGAVRYGSEHGDPFLGRTMGTQA 544
Query: 766 DRINE----IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEF 815
D +E ID E +++ + A EIL R++LD + EL+EK++L + E
Sbjct: 545 DYSHEVARDIDDEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPEL 598
>sp|O82150|FTSH_TOBAC ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Nicotiana
tabacum GN=FTSH PE=2 SV=2
Length = 714
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/451 (39%), Positives = 264/451 (58%), Gaps = 26/451 (5%)
Query: 390 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 449
V F+DVAG + +LEL+E+V F + + Y G +IP G LL GPPG GKTLLA+AVAGE
Sbjct: 250 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 309
Query: 450 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 509
AGV FFS +AS+FVE++VGVGASRVR L+++AK AP +VFIDE+DAVGR+RG G G
Sbjct: 310 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGN 369
Query: 510 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 569
ER+ T+NQLL +DGF G VI +A+TNRPD+LD AL+RPGRFDR++ + +P + GR+
Sbjct: 370 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRI 429
Query: 570 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 629
+IL+VH+R K + DVD+ +A T G GA+L N++ AAI R EI+ D++ A
Sbjct: 430 KILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISDA 489
Query: 630 AQIEERGMLDRKER----SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG 685
ER + +++ S E + VA +EA A+V P+ + ++I PR G+ G
Sbjct: 490 L---ERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGG 545
Query: 686 YVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAAR 745
+ + G+ SR L + + V L R A+E+ G+ ++T + AR
Sbjct: 546 LTFFAPSEERLESGLYSRSYLENQMAVALGERVAEEVIFGQDNVTTGASNDFMQVSRVAR 605
Query: 746 TFV--------LGGLSDKHFGLSNF----------WVADRINEIDTEALRILNLCYERAK 787
V +G ++ G + F + + +D E ++ YERA
Sbjct: 606 QMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMATADVVDAEVRELVERAYERAT 665
Query: 788 EILQRNRNLLDAVVNELVEKKSLTKQEFFHL 818
EI+ + ++L + L+EK+++ +EF L
Sbjct: 666 EIITTHIDILHKLAQLLIEKETVDGEEFMSL 696
>sp|B8H444|FTSH_CAUCN ATP-dependent zinc metalloprotease FtsH OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=ftsH PE=2 SV=1
Length = 626
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 191/494 (38%), Positives = 281/494 (56%), Gaps = 42/494 (8%)
Query: 363 MQFMKSGARVRRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
M+ M+ GA+ +GK + L E + F DVAG+ + + EL+E+V F ++R
Sbjct: 120 MRQMQGGAKGAMGFGKSKARLLTENKNRITFEDVAGVDEAKEELQEVVDFLKDPAKFQRL 179
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G +IP G LL GPPG GKTL+A+AVAGEAGV FF+IS S FVE++VGVGASRVR ++++A
Sbjct: 180 GGKIPKGALLVGPPGTGKTLIARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQA 239
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
K NAP ++FIDE+DAVGR RG G G ER+ TLNQLLV +DGFE +I IA+TNRP
Sbjct: 240 KKNAPCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEANEGIILIAATNRP 299
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
D+LDPAL+RPGRFDR++ +P P + GR +I++VH + P+A DVD +A T G GA+
Sbjct: 300 DVLDPALLRPGRFDRQVVVPNPDVAGREKIIRVHMKNVPLAADVDVKTLARGTPGFSGAD 359
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERS----SETWRQVAINEAA 657
LAN+V AA+ R R +T D QA +++ M+ + RS E + A +E
Sbjct: 360 LANLVNEAALMAARKNRRMVTMQDFEQA---KDKVMMGAERRSMAMNEEEKKLTAYHEGG 416
Query: 658 MAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEG---MLSRQSLLDHITVQL 714
A+VA+N P + TI PR GR LG V M+ EG + Q + + + +
Sbjct: 417 HAIVALNVPLADPVHKATIVPR-GRALGMV------MQLPEGDRYSMKYQQMTSRLAIMM 469
Query: 715 APRAADELWCGEGQLSTIWAETADNARSAARTFV--------LGGLS-----DKHFGLSN 761
R A+E+ G+ +++ + A AR V LG ++ D+ F +
Sbjct: 470 GGRVAEEIIFGKENITSGASSDIKAATDLARNMVTRWGYSDILGTVAYGDNQDEVFLGHS 529
Query: 762 FWVADRINE-----IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFF 816
++E ID+E R++ + A+ IL + L + L+E ++L+ +E
Sbjct: 530 VARTQNVSEETARLIDSEVKRLVQYGLDEARRILTDKIDDLHTLGKALLEYETLSGEEIA 589
Query: 817 HLVELHGSLEPMPP 830
+ L+ +PP
Sbjct: 590 DI------LKGIPP 597
>sp|Q9TJ83|FTSH_CYAME ATP-dependent zinc metalloprotease FtsH OS=Cyanidioschyzon merolae
GN=ftsH PE=3 SV=1
Length = 603
Score = 308 bits (788), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 194/481 (40%), Positives = 268/481 (55%), Gaps = 43/481 (8%)
Query: 362 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
A+ F KS AR + G + F DVAG+ + + EL E+V F + +
Sbjct: 133 ALNFGKSKARFQMVAKTG----------IMFDDVAGIEEAKEELAEVVAFLKNPSKFLAV 182
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G IP G+LL GPPG GKTLLAKA+AGEA V FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 183 GASIPKGVLLVGPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKA 242
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
K NAP +VFIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG VI IA+TNR
Sbjct: 243 KQNAPCLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRV 302
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
D+LD AL+RPGRFDR+I + P + R+ ILKVHA +K + V AVA T G GA+
Sbjct: 303 DVLDAALLRPGRFDRQIMVSMPDVKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGAD 362
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVV 661
LAN++ AAI +R G +IT ++ A GM + R +A +E A+
Sbjct: 363 LANLLNEAAILAVRRGLKQITWKEIDDAIDRVIAGMEGTPIMDGKIKRLIAYHETGHALT 422
Query: 662 AVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 721
A P+ ++ VT+ PR + G D+ + +LS+ L+ I V L RAA+E
Sbjct: 423 ATLLPNHPPVQKVTLIPRR-QAKGLTWFMQDN---ERDLLSKSQLMSMIMVALGGRAAEE 478
Query: 722 LWCGEGQLSTIWAETADNARSAARTFVLGGLSDKHFGLSN-------------FWVADR- 767
G +++T + + AR V FG+S+ F D
Sbjct: 479 AVFGNAEVTTGASNDLQQVTNLARQMV------TRFGMSSLGPLCLETGNEEIFLGRDMR 532
Query: 768 ---------INEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHL 818
I +ID + ++ CYE+ E++Q NR ++D +V EL+EK++L +EF L
Sbjct: 533 LMPEVSEEVIAQIDAQVRGMIEACYEKVLELMQANRVVMDRIVEELMEKETLDGKEFRQL 592
Query: 819 V 819
V
Sbjct: 593 V 593
>sp|B9L3S8|FTSH2_THERP ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH2 PE=3 SV=1
Length = 699
Score = 307 bits (787), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 190/439 (43%), Positives = 256/439 (58%), Gaps = 24/439 (5%)
Query: 390 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 449
V F+DVAG + + EL ++V F + Y R G R+P G+LL GPPG GKTLLA+AVAGE
Sbjct: 248 VTFADVAGEEEAKAELAQVVDFLKNPAKYHRIGARLPRGVLLVGPPGTGKTLLARAVAGE 307
Query: 450 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 509
AGV FFS+SAS+FVE++VGVGASRVR L++ AK APS++FIDELDAVGR+R G G
Sbjct: 308 AGVPFFSVSASEFVEMFVGVGASRVRDLFERAKAQAPSIIFIDELDAVGRQRFAGLGVGN 367
Query: 510 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 569
ER+ TLNQLLV +DGFE +V+ IA+TNRPD+LDPAL+RPGRFDR++ + P GR
Sbjct: 368 DEREQTLNQLLVEMDGFEAHTDVVVIAATNRPDVLDPALLRPGRFDRQVVVGLPDKRGRA 427
Query: 570 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 629
IL++H R P+A DVD +A+ T G GA+LAN+V AA+ R G+ + D +A
Sbjct: 428 AILRIHTRGIPIAPDVDLEGLAAATPGFSGADLANLVNEAALVAARRGKQVVDRSDFEEA 487
Query: 630 AQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRM 689
G S E R VA +EA AVVA P + ++I PR GR LG
Sbjct: 488 LDKMLLGTTRSLLMSQEERRLVAYHEAGHAVVAYFTPGADPLRKISIVPR-GRALGVTVQ 546
Query: 690 KMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAARTFV- 748
+ +F +R LL + V L RAA++L E ++T A AR V
Sbjct: 547 APEEDRFN---YTRNQLLGRLAVLLGGRAAEQLVFHE--VTTGAQNDLKEATQLARRMVG 601
Query: 749 -------LG----GLSDKHFGLSNFWVADR------INEIDTEALRILNLCYERAKEILQ 791
LG GL ++H L V D ++ D R+LN ERA+ IL+
Sbjct: 602 LWGMSEELGPIYLGLGEQHVFLGREIVQDHSIGTSTLDRADQAVQRLLNEAMERAERILR 661
Query: 792 RNRNLLDAVVNELVEKKSL 810
+R LD + + L+ ++++
Sbjct: 662 EHREELDRLADLLIAEETV 680
>sp|Q55700|FTSH2_SYNY3 ATP-dependent zinc metalloprotease FtsH 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH2 PE=1 SV=1
Length = 627
Score = 306 bits (785), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 187/475 (39%), Positives = 274/475 (57%), Gaps = 31/475 (6%)
Query: 362 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
AM F KS AR + ++ V F DVAG+ + + EL+E+V F E +
Sbjct: 151 AMNFGKSKARFQ----------MDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAV 200
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G +IP G+LL GPPG GKTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 201 GAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA 260
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
K+NAP ++FIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I IA+TNRP
Sbjct: 261 KENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRP 320
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
D+LD AL+RPGRFDR++ + P GR EIL+VHAR K +A +V ++A T G GA+
Sbjct: 321 DVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGAD 380
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVV 661
LAN++ AAI R ++ IT ++ A GM S++ R +A +E A+V
Sbjct: 381 LANLLNEAAILTARRRKSAITLLEIDDAVDRVVAGMEGTPLVDSKSKRLIAYHEVGHAIV 440
Query: 662 AVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 721
D ++ VT+ PR G+ G + ++G+ ++ L+ I + RAA+E
Sbjct: 441 GTLLKDHDPVQKVTLIPR-GQAQGLTWFTPNE---EQGLTTKAQLMARIAGAMGGRAAEE 496
Query: 722 LWCGEGQLSTIWAETADNARSAARTFV-------LGGLSDKHFGLSNFWVADRIN----- 769
G+ +++T AR V LG +S + G F +N
Sbjct: 497 EVFGDDEVTTGAGGDLQQVTEMARQMVTRFGMSNLGPISLESSGGEVFLGGGLMNRSEYS 556
Query: 770 -----EIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 819
ID + ++ ++ A++I+Q R ++D +V+ L+EK+++ +EF +V
Sbjct: 557 EEVATRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQIV 611
>sp|B8G4Q6|FTSH_CHLAD ATP-dependent zinc metalloprotease FtsH OS=Chloroflexus aggregans
(strain MD-66 / DSM 9485) GN=ftsH PE=3 SV=1
Length = 656
Score = 306 bits (785), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 197/479 (41%), Positives = 276/479 (57%), Gaps = 35/479 (7%)
Query: 362 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
AM F KS AR+ + P + F+DVAG + + +L EIV+F + +
Sbjct: 148 AMSFGKSRARM---FAGDKPT-------ITFADVAGQEEAKQDLAEIVEFLKFPDKFAAL 197
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G RIP G+L+ GPPG GKTLL++AVAGEAGV FFSIS S+FVE++VGVGASRVR L+ +A
Sbjct: 198 GARIPRGVLMVGPPGTGKTLLSRAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQA 257
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
K NAP +VFIDE+DAVGR+RG G ER+ TLNQ+LV +DGF+ NVI IA+TNRP
Sbjct: 258 KRNAPCIVFIDEIDAVGRQRGAGLGGSHDEREQTLNQILVEMDGFDTNTNVIVIAATNRP 317
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
D+LDPALVRPGRFDR++ + P + GR+EILKVH + KP+A+DV+ +A T G GA+
Sbjct: 318 DVLDPALVRPGRFDRQVVLDAPDVRGRIEILKVHVKGKPLAEDVNLEILARQTPGFSGAD 377
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ---VAINEAAM 658
L N+V AAI R + +I+ + A + G +R+ R T RQ VA +EA
Sbjct: 378 LMNVVNEAAILAARRSKRKISMAEFQDAVERVAIGGPERRSRVM-TDRQKLVVAYHEAGH 436
Query: 659 AVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRA 718
A+V P ++ VTI PR G+ GY D +S+ + V L R
Sbjct: 437 AIVGAALPKADKVQKVTIIPR-GQAGGYTLFLPDEDSLNLRTVSQ--FKARLAVSLGGRV 493
Query: 719 ADELWCGEGQLSTIWAETADNARSAARTFVL-GGLSDKH----FGLSN--FWVADRINE- 770
A+E+ G +++T + AR V G+S + FG ++ I+E
Sbjct: 494 AEEIVFGNEEVTTGASGDLVQVTRIARAMVTRYGMSQRLGPIVFGEKEELIFLGREISEQ 553
Query: 771 ----------IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLV 819
ID E I++ YE A++IL +NR +LD + N L+E ++L ++ L+
Sbjct: 554 RNYGDEVARQIDEEVHAIVSEAYETAQQILLQNRAVLDDMANALIEYETLDGEQLEELI 612
>sp|D1BLD0|FTSH_VEIPT ATP-dependent zinc metalloprotease FtsH OS=Veillonella parvula
(strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) GN=ftsH
PE=3 SV=1
Length = 642
Score = 306 bits (784), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 277/485 (57%), Gaps = 29/485 (5%)
Query: 364 QFMKSGARVRRAYGKGLPQYLERG-VDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 422
Q G RV +GK + + G V V F DVAG + + ELEE+V+F + G
Sbjct: 125 QTQGGGGRVMN-FGKSRAKLMGEGNVKVSFKDVAGAEEAKQELEEVVEFLKDPGKFTTIG 183
Query: 423 VRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 482
+IP G+LL GPPG GKTLLAKAVAGEAGV FF+IS S FVE++VGVGASRVR L+ +AK
Sbjct: 184 AKIPKGVLLAGPPGTGKTLLAKAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFTQAK 243
Query: 483 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 542
NAP ++FIDE+DAVGR+RG G G ER+ TLNQLLV +DGF +ITIA+TNRPD
Sbjct: 244 KNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGANEGIITIAATNRPD 303
Query: 543 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 602
ILDPAL+RPGRFDR++ + +P L GR ILKVHAR KP+ADDVD +A T G GA+L
Sbjct: 304 ILDPALLRPGRFDRQVIVGRPDLRGREAILKVHARNKPLADDVDLKIIAKKTPGFTGADL 363
Query: 603 ANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVV 661
+N++ AA+ R + IT ++ +A++ G R S+ R++ A +E+ A+V
Sbjct: 364 SNLLNEAALLAARLNKKVITMAEVEEASEKVSMGPERRSHIVSDKDRKLTAYHESGHAIV 423
Query: 662 AVNFPDLKNIEFVTIAPRAGRELGYVRM-KMDHMKFKEGMLSRQSLLDHITVQLAPRAAD 720
A P + VTI PR G GY M + +K ++ LL I V L R A+
Sbjct: 424 AHLLPHADPVHKVTIIPR-GAAGGYTMMLPTEEQNYK----TKSQLLADIRVALGGRIAE 478
Query: 721 ELWCGEGQLSTIWAETADNARSAARTFVL-GGLSD-----------------KHFGLSNF 762
L E +ST + + + AR V G+SD K+ G
Sbjct: 479 ALILDE--ISTGASGDLQSVTNTARAMVTRWGMSDELGPIVFGEQQEQIFLGKNLGHERN 536
Query: 763 WVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELH 822
+ + +ID+E RI+ Y+ ++L N L + N L+E++++ + +L +
Sbjct: 537 YSEEIAAKIDSEIHRIVEEAYKDVTKLLSDNEKFLHDMANALLEEETIDAKAVDNLYKYG 596
Query: 823 GSLEP 827
+ EP
Sbjct: 597 TTKEP 601
>sp|C7MC16|FTSH_BRAFD ATP-dependent zinc metalloprotease FtsH OS=Brachybacterium faecium
(strain ATCC 43885 / DSM 4810 / NCIB 9860) GN=ftsH PE=3
SV=1
Length = 704
Score = 306 bits (784), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 204/488 (41%), Positives = 279/488 (57%), Gaps = 38/488 (7%)
Query: 362 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
AMQF KS A++ + K P+ V F+DVAG + EL+EI +F Y+
Sbjct: 156 AMQFGKSKAKL---FNKEAPK-------VTFADVAGADEAVEELDEIKQFLVDPGRYQAV 205
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G +IP G+LL GPPG GKTLLAKAVAGEA V F+SIS S FVE++VGVGASRVR L+ A
Sbjct: 206 GAKIPKGVLLYGPPGTGKTLLAKAVAGEANVPFYSISGSDFVEMFVGVGASRVRDLFNTA 265
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
K+NAP+++FIDE+DAVGR RG G G ER+ TLNQ+LV +DGFE NVI IA+TNR
Sbjct: 266 KENAPAIIFIDEIDAVGRHRGAGMGGGHDEREQTLNQMLVEMDGFEENQNVILIAATNRV 325
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
DILDPAL+RPGRFDR+I + P L GR+ IL VHA+ KP+A DVD AVA GM GA+
Sbjct: 326 DILDPALLRPGRFDRQIGVEAPDLKGRLHILGVHAKGKPLAHDVDLEAVAKRAIGMSGAD 385
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAV 660
LAN++ AA+ R G I L +A G + +E RQ+ A +E A+
Sbjct: 386 LANVLNEAALLTARSGNQIIDNRALDEAIDRVSMGPQRYSKVMTERERQMTAYHEGGHAL 445
Query: 661 VAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAAD 720
VA + + VTI PR GR GY + + + SR LLD + + A +
Sbjct: 446 VAAAMNNSAPVTKVTILPR-GRAGGYTMVVPTQDRNYQ---SRNELLDRLAYAMGGYAVE 501
Query: 721 ELWCGEGQLSTIWAETADNARSAARTFV-------------LGGLSDKHF-----GLSNF 762
E + ++T + NA ART V L G D+ F G +
Sbjct: 502 ESIFHD--VTTGPSSDLQNATKIARTMVMQLGMSGTVGQVALSGEQDEVFVGMQQGQAPR 559
Query: 763 WVADRINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELH 822
+ A+ + +D E +L+ + A ++ NR++LD +V EL+EK++L ++E L ++
Sbjct: 560 FSAETASLVDQEVRTLLDNALDEAWSVIVENRHVLDRLVEELLEKETLNERE---LAQIF 616
Query: 823 GSLEPMPP 830
++ PP
Sbjct: 617 RDVKKQPP 624
>sp|B9KXV3|FTSH1_THERP ATP-dependent zinc metalloprotease FtsH 1 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH1 PE=3 SV=1
Length = 652
Score = 306 bits (784), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 205/492 (41%), Positives = 281/492 (57%), Gaps = 41/492 (8%)
Query: 362 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
A+ F KS ARV + V F DVAG+ + + EL+EIV+F + E +
Sbjct: 142 ALSFGKSRARV----------FTSNRPTVTFDDVAGVDEAKEELQEIVEFLKYPEKFAAL 191
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G RIP G+LL GPPG GKTLL++AVAGEAGV FFSIS S+FVE++VGVGASRVR L+ +A
Sbjct: 192 GARIPRGVLLVGPPGTGKTLLSRAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQA 251
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
K NAP +VFIDE+DAVGR+RG G ER+ TLNQ+LV +DGF+ NVI IA+TNRP
Sbjct: 252 KRNAPCIVFIDEIDAVGRQRGAGLGGSHDEREQTLNQILVEMDGFDSSTNVIVIAATNRP 311
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
D+LDPAL+RPGRFDR++ + +P L GR+ ILKVH R KP+ DVD +A T G GA+
Sbjct: 312 DVLDPALLRPGRFDRQVVLDRPDLHGRLAILKVHTRGKPLESDVDLEDLARQTPGFSGAD 371
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWR-QVAINEAAMAV 660
L N+V AAI R + I +L +A G + R SE + A +EA A+
Sbjct: 372 LENLVNEAAILAARRNKKTIGRRELYEAIDRVVAGPERKSRRISEREKLMTAYHEAGHAL 431
Query: 661 VAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAAD 720
VA P + V+I R G GY R+ + +F +++ + V +A A+
Sbjct: 432 VARMLPHADPVHKVSIVAR-GMMGGYTRVLPEEDRF---FWTKKQFEAQLAVFMAGLVAE 487
Query: 721 ELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK----HFGLSNFWV----------- 764
EL E +ST A + A + AR V G+S++ FG V
Sbjct: 488 ELVFQE--VSTGAANDIERATTLARRMVTEFGMSERLGPLAFGRKEELVFLGREIAEQRN 545
Query: 765 -ADRIN-EIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVELH 822
+D++ EID E R+++ Y+ AK+IL + + L+ + LVEK++L E L +
Sbjct: 546 YSDQVAYEIDQEVRRLIDQAYQTAKQILLDHMDKLEKIATLLVEKETLDGHEIEALFD-- 603
Query: 823 GSLEPMP-PSIV 833
EP P P +V
Sbjct: 604 ---EPRPRPELV 612
>sp|A1URA3|FTSH_BARBK ATP-dependent zinc metalloprotease FtsH OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=ftsH PE=3 SV=1
Length = 764
Score = 306 bits (783), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 187/483 (38%), Positives = 280/483 (57%), Gaps = 36/483 (7%)
Query: 363 MQFMKSGARVRRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
M+ M+ G+R +GK + L E V F DVAG+ + + +L+EIV F + ++R
Sbjct: 125 MRQMQGGSRGALGFGKSKAKLLTEAQGRVTFKDVAGVEEAKQDLQEIVDFLREPQKFQRL 184
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G RIP G+LL GPPG GKTLLA+++AGEA V FF+IS S FVE++VGVGASRVR ++++A
Sbjct: 185 GGRIPRGVLLVGPPGTGKTLLARSIAGEANVPFFTISGSDFVEMFVGVGASRVRDMFEQA 244
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
K NAP ++FIDE+DAVGR RG G G ER+ TLNQLLV +DGFE ++I IA+TNRP
Sbjct: 245 KKNAPCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEPNESIILIAATNRP 304
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
D+LDPAL+RPGRFDR++ +P P + GR +IL+VH R P+A +V+ +A T G GA+
Sbjct: 305 DVLDPALLRPGRFDRQVVVPNPDVAGREKILEVHVRNVPLAPNVNLRVLARGTPGFSGAD 364
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ----VAINEAA 657
L N+V AA+ + +T + A +++ M+ + RS+ ++ A +EA
Sbjct: 365 LMNLVNEAALMAASRNKKVVTMQEFEDA---KDKVMMGAERRSTAMTQEEKELTAYHEAG 421
Query: 658 MAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEG---MLSRQSLLDHITVQL 714
A+VA+N P + TI PR GR LG V M+ EG +S ++ + + +
Sbjct: 422 HAIVALNVPVSDPVHKATIVPR-GRALGMV------MQLPEGDRYSMSYLWMVSRLAIMM 474
Query: 715 APRAADELWCGEGQLSTIWAETADNARSAARTFV--------LGGLS-----DKHFGLSN 761
R A+EL G+ +++ A + A AR + LG ++ D+ F +
Sbjct: 475 GGRVAEELKFGKENITSGAASDIEQATKLARAMITRWGFSDMLGHVAYGDNQDEIFLGHS 534
Query: 762 FWVADRINE-----IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFF 816
I+E ID E R+++ Y+ A +IL+ A+ L+E ++LT E
Sbjct: 535 VARTQNISEETARMIDAEVRRLIDDAYKTATKILKTQNKQWLALAQGLLEYETLTGTEIN 594
Query: 817 HLV 819
++
Sbjct: 595 EVI 597
>sp|Q655S1|FTSH2_ORYSJ ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH2 PE=3 SV=1
Length = 676
Score = 305 bits (782), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 192/462 (41%), Positives = 264/462 (57%), Gaps = 46/462 (9%)
Query: 384 LERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLA 443
+E V F DVAG+ + + + E+V+F E + G RIP G+LL GPPG GKTLLA
Sbjct: 205 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 264
Query: 444 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 503
KA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++AK+NAP +VF+DE+DAVGR+RG
Sbjct: 265 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGT 324
Query: 504 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 563
G G ER+ TLNQLL +DGFEG +I IA+TNR DILD AL+RPGRFDR++ + P
Sbjct: 325 GIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVSVDVP 384
Query: 564 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 623
+ GR EILKVH K DV +A T G GA+LAN++ AAI R GRT I++
Sbjct: 385 DVRGRTEILKVHGSNKKFDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGRTAISS 444
Query: 624 ---DDLLQ--AAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAP 678
DD + A +E M D K +S VA +E A+ P ++ VT+ P
Sbjct: 445 KEIDDSIDRIVAGMEGTVMTDGKSKS-----LVAYHEVGHAICGTLTPGHDPVQKVTLIP 499
Query: 679 RA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETA 737
R R L + + MD ++SRQ L I L RAA+E+ GE +++T A
Sbjct: 500 RGQARGLTWF-IPMDDPT----LISRQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGDL 554
Query: 738 DNARSAARTFVLGGLSDKHFGLSNF--W---------------------VADRINE-IDT 773
A+ V+ FG+S+ W +++++ E IDT
Sbjct: 555 QQITGLAKQMVV------TFGMSDIGPWSLMDSGAQSGDVIMRMMARNSMSEKLAEDIDT 608
Query: 774 EALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEF 815
R+ + YE A ++ NR +D +V L+EK++L+ EF
Sbjct: 609 AVKRLSDEAYEIALSQIRSNREAMDKIVEVLLEKETLSGDEF 650
>sp|A9BJK3|FTSH3_PETMO ATP-dependent zinc metalloprotease FtsH 3 OS=Petrotoga mobilis
(strain DSM 10674 / SJ95) GN=ftsH3 PE=3 SV=1
Length = 645
Score = 305 bits (781), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 189/487 (38%), Positives = 277/487 (56%), Gaps = 52/487 (10%)
Query: 362 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
M F+KS A+ +Y + F+DVAG+ + + EL ++VKF +++ R
Sbjct: 141 GMNFIKSPAK----------KYDPKKTRTTFNDVAGVKEAKEELTDVVKFLKDPKVFNRL 190
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G R+P G+LL G PG GKTLLA+AVAGEAGV FF IS S FVE++VGVGA+RVR L+ +A
Sbjct: 191 GARMPKGVLLVGEPGTGKTLLARAVAGEAGVPFFYISGSDFVELFVGVGAARVRDLFNQA 250
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
K NAP+++FIDE+DAVGR+RG G G ER+ TLN +LV +DGF+ +I +A+TNRP
Sbjct: 251 KANAPAIIFIDEIDAVGRQRGSGLGGGHDEREQTLNSILVEMDGFDPSIGIIVMAATNRP 310
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
D+LD AL+RPGRFD+K+ I +P GR +ILK+H R K +A DVD +A T G VGA+
Sbjct: 311 DVLDKALLRPGRFDKKVVIDRPDAEGRKDILKIHFRGKKIAPDVDLEVLARATPGFVGAD 370
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGML--DRKER--SSETWRQVAINEAA 657
L N+V AA+ R+G IT D +A ER ++ +RK R S + VA +E
Sbjct: 371 LENLVNEAALLAARNGEKFITMKDCEEAI---ERVIVGPERKTRVLSEQEKEVVAYHELG 427
Query: 658 MAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPR 717
A++ P+ + VTI PR LGY ++ ++++ +LD I V LA R
Sbjct: 428 HAILGTILPNADPVHKVTIIPRGYAALGYTLQLPSEDRY---LMNKSEILDDIAVMLAGR 484
Query: 718 AADELWCGEGQLSTIWAETADNARSAARTFVLGGLSDKHFGLSN-----FWVADR----- 767
AA+E+ E +++ A AR V + FG+S W ++
Sbjct: 485 AAEEIIFDE--ITSGAENDLKRATEMARRMV------ESFGMSEKIGPVAWASESEETFL 536
Query: 768 --------------INEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQ 813
E+D+E +I+N YE+AK +L N+ L + L++K++++ Q
Sbjct: 537 ARELFREKNYSDETAKELDSEVKQIINKSYEKAKSVLLENKEKLQFIAQYLLKKETISGQ 596
Query: 814 EFFHLVE 820
E L++
Sbjct: 597 ELRDLLQ 603
>sp|A0L4S0|FTSH_MAGSM ATP-dependent zinc metalloprotease FtsH OS=Magnetococcus sp.
(strain MC-1) GN=ftsH PE=3 SV=1
Length = 673
Score = 305 bits (780), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 188/482 (39%), Positives = 277/482 (57%), Gaps = 38/482 (7%)
Query: 364 QFMKSGARVRRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 422
Q G R ++GK + + ++ V F DVAG+ + + EL+E+V+F ++R G
Sbjct: 124 QMQSGGGRGAMSFGKSKAKLMSDKAAKVTFQDVAGIEEAKEELQEVVQFLKDPHKFQRLG 183
Query: 423 VRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 482
+IP G+LL GPPG GKTLLA+A+AGEA V FF++S S FVE++VGVGA+RVR ++++ K
Sbjct: 184 GKIPKGVLLVGPPGTGKTLLARAIAGEANVPFFNLSGSDFVEMFVGVGAARVRDMFEQGK 243
Query: 483 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 542
NAP ++FIDE+DAVGR RG G G ER+ TLNQLLV +DGFE VI +A+TNRPD
Sbjct: 244 KNAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESTEGVIMVAATNRPD 303
Query: 543 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 602
+LDPAL+RPGRFDR++ +P P ++GR +ILKVH K P++D VD +A T G GA+L
Sbjct: 304 VLDPALLRPGRFDRQVTVPNPDILGRTQILKVHMNKVPLSDSVDAEVIARATPGFSGADL 363
Query: 603 ANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERS---SETWRQ-VAINEAAM 658
AN+V AA+ + + + +D A +++ M+ + RS SE R+ A +EA
Sbjct: 364 ANLVNEAALIAAQLDKRVVEMEDFENA---KDKVMMGKPRRSAVISEKERKTTAYHEAGH 420
Query: 659 AVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKM---DHMKFKEGMLSRQSLLDHITVQLA 715
AVVA+ + VTI PR GR LG + M++ D + S+ L +I + +
Sbjct: 421 AVVAMALDGADPVHKVTIIPR-GRALG-LTMQLPLEDRYTY-----SKVQLEQNIAILMG 473
Query: 716 PRAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDKHFGLS------NFWVADRI 768
R A+EL QL+T A AR + G+SD L+ ++ I
Sbjct: 474 GRLAEELVL--NQLTTGAGNDIQRATDLARKMICSYGMSDTLGPLTYGENEQEIFLGREI 531
Query: 769 NE-----------IDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFH 817
+ ID E I++ Y+RAK+IL +L + L+E++++ E
Sbjct: 532 TQHKSVSEETARRIDAEVFDIVDRNYKRAKQILTDKMEVLHTMAQALLERETIDADEVIK 591
Query: 818 LV 819
L+
Sbjct: 592 LM 593
>sp|C6V4R9|FTSH_NEORI ATP-dependent zinc metalloprotease FtsH OS=Neorickettsia risticii
(strain Illinois) GN=ftsH PE=3 SV=1
Length = 636
Score = 304 bits (778), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 193/474 (40%), Positives = 272/474 (57%), Gaps = 24/474 (5%)
Query: 363 MQFMKSGARVRRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 421
M+ M++G +GK + L +R V F DVAG+ + + EL EIV+F + +++
Sbjct: 126 MKQMQAGGNKTMTFGKSKARLLSDRSNKVTFHDVAGIDEAKEELAEIVEFLREPKKFQKL 185
Query: 422 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 481
G +IP G LL GPPG GKTLLAKA+AGEA V FFSIS S FVE++VGVGASRVR ++++
Sbjct: 186 GGKIPKGCLLIGPPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQG 245
Query: 482 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 541
K NAP ++FIDE+DAVGR RG+ G G ER+ TLNQLLV +DGFE VI IA+TNRP
Sbjct: 246 KKNAPCLIFIDEIDAVGRHRGVGFGGGNDEREQTLNQLLVEMDGFEANEGVIIIAATNRP 305
Query: 542 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 601
D+LDPAL+RPGRFDR+I I P + GR +IL+VH +K P A +V+ +A T G GA+
Sbjct: 306 DVLDPALLRPGRFDRQITISIPDIAGRQKILEVHLKKIPTAPNVEVSIIARGTPGFSGAD 365
Query: 602 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ-----VAINEA 656
LAN+V +A+ R + +T +D A GM ER S R+ A +EA
Sbjct: 366 LANLVNESALIAARRNKKVVTNEDFEYARDKILMGM----ERKSLVMREEEKLLTAYHEA 421
Query: 657 AMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAP 716
AV ++ I TI PR GR LG V +H + +R + + V +
Sbjct: 422 GHAVTSLKLEASDPIHKATIIPR-GRALGLVMRLPEHDRVS---FTRAKMHADLIVAMGG 477
Query: 717 RAADELWCGEGQLSTIWAETADNARSAARTFVLG-GLSDK----HFGLSN-----FWVAD 766
RAA+++ G+ + ++ A A AR+ V G+S+K +G N +
Sbjct: 478 RAAEQVIFGDDKTTSGAASDIKQATHLARSMVTKWGMSEKVGPLLYGEQNDPNNHILSIE 537
Query: 767 RINEIDTEALRILNLCYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHLVE 820
N ID+E +++ + A +IL N L + L+E ++LT QE L+E
Sbjct: 538 MSNLIDSEVKQLITDALKEATKILNENIESLHRIAKALLEYETLTGQELSDLLE 591
>sp|Q9BAE0|FTSH_MEDSA ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Medicago
sativa GN=FTSH PE=2 SV=1
Length = 706
Score = 304 bits (778), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/457 (38%), Positives = 266/457 (58%), Gaps = 39/457 (8%)
Query: 390 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 449
V F+DVAG + +LEL+E+V F + + Y G +IP G LL GPPG GKTLLA+AVAGE
Sbjct: 250 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 309
Query: 450 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 509
AG FFS +AS+FVE++VGVGASRVR L+++AK AP +VFIDE+DAVGR+RG G G
Sbjct: 310 AGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGLGGGN 369
Query: 510 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 569
ER+ T+NQLL +DGF G VI +A+TNRPD+LD AL+RPGRFDR++ + +P + GR+
Sbjct: 370 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV 429
Query: 570 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 629
+IL+VH+R K +A DVD+ +A T G G +L N++ AAI R EI+ D++ A
Sbjct: 430 KILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADA 489
Query: 630 AQIEERGMLDRKER----SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG 685
ER + +++ S E + VA +EA A+V P+ + ++I PR G+ G
Sbjct: 490 L---ERIIAGPEKKNAVVSEEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGG 545
Query: 686 YVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQLSTIWAETADNARSAAR 745
+ + G+ SR L + + V L R A+E++ G+ ++T + AR
Sbjct: 546 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVF-GQDNVTTGASNDFMQVSRVAR 604
Query: 746 TFVLGGLSDKHFGLS-------------NFWVADRINE-----------IDTEALRILNL 781
V + FG S N ++ +++ +D E +++
Sbjct: 605 QMV------ERFGFSKKIGQVAIGGGGGNPFLGQQMSSQKDYSMATADIVDKEVRELVDK 658
Query: 782 CYERAKEILQRNRNLLDAVVNELVEKKSLTKQEFFHL 818
YERA +I+ + ++L + L+EK+++ +EF L
Sbjct: 659 AYERATQIINTHIDILHKLAQLLIEKETVDGEEFMSL 695
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 313,148,819
Number of Sequences: 539616
Number of extensions: 13767946
Number of successful extensions: 111895
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2224
Number of HSP's successfully gapped in prelim test: 2375
Number of HSP's that attempted gapping in prelim test: 86708
Number of HSP's gapped (non-prelim): 17254
length of query: 859
length of database: 191,569,459
effective HSP length: 126
effective length of query: 733
effective length of database: 123,577,843
effective search space: 90582558919
effective search space used: 90582558919
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)