Query 003005
Match_columns 858
No_of_seqs 401 out of 3048
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 09:47:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003005.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003005hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 6E-99 2E-103 889.5 52.6 620 163-849 2-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 1.2E-92 4.1E-97 839.1 50.2 612 162-848 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 2.5E-75 8.7E-80 717.9 44.4 544 168-852 3-609 (926)
4 3afg_A Subtilisin-like serine 100.0 9.2E-58 3.1E-62 530.4 40.9 339 117-710 59-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 1.4E-56 4.6E-61 504.6 17.8 319 117-709 23-392 (395)
6 3t41_A Epidermin leader peptid 100.0 6E-54 2.1E-58 495.5 25.3 337 116-710 64-466 (471)
7 2p4e_P Proprotein convertase s 100.0 1.3E-55 4.4E-60 513.8 7.4 340 117-708 108-465 (692)
8 1r6v_A Subtilisin-like serine 100.0 5.3E-53 1.8E-57 495.5 22.6 338 118-714 53-444 (671)
9 1y9z_A Alkaline serine proteas 100.0 7.7E-52 2.6E-56 472.5 25.8 389 169-730 11-437 (441)
10 1dbi_A AK.1 serine protease; h 100.0 4.3E-51 1.5E-55 438.0 21.9 257 175-708 23-279 (280)
11 4h6x_A Thiazoline oxidase/subt 100.0 6.5E-53 2.2E-57 467.9 4.6 305 169-708 18-337 (357)
12 1thm_A Thermitase; hydrolase(s 100.0 1.2E-50 4.1E-55 434.5 21.1 261 169-708 18-278 (279)
13 1gci_A Subtilisin; hydrolase, 100.0 1E-50 3.6E-55 432.2 20.0 254 175-708 16-269 (269)
14 1r0r_E Subtilisin carlsberg; h 100.0 7.9E-51 2.7E-55 434.8 18.2 255 175-708 16-274 (274)
15 1to2_E Subtilisin BPN'; serine 100.0 2E-50 6.9E-55 433.0 19.5 257 175-709 16-276 (281)
16 3zxy_A Subtilisin-like protein 100.0 5.7E-51 2E-55 438.6 11.8 265 184-708 4-274 (282)
17 2x8j_A Intracellular subtilisi 100.0 2.5E-50 8.6E-55 441.4 14.9 263 175-709 33-311 (327)
18 4h6w_A N-terminal cyanobactin 100.0 1.6E-50 5.3E-55 440.9 12.3 277 168-709 7-288 (306)
19 2ixt_A 36KDA protease; serine 100.0 4.1E-49 1.4E-53 430.2 22.6 285 175-703 18-309 (310)
20 2z30_A TK-subtilisin; thermoco 100.0 1.7E-49 5.8E-54 434.4 15.8 268 169-709 15-317 (320)
21 1wmd_A Protease; alpha-beta hy 100.0 1.8E-48 6.1E-53 444.4 18.1 295 168-710 7-319 (434)
22 2iy9_A SUBA; toxin, shiga, pla 100.0 1.2E-48 3.9E-53 433.3 15.0 273 169-709 30-329 (347)
23 3lpc_A APRB2; protease, subtil 100.0 5.3E-48 1.8E-52 427.1 16.3 304 169-709 19-337 (340)
24 3lxu_X Tripeptidyl-peptidase 2 100.0 1.2E-46 4E-51 458.5 28.2 361 265-854 267-658 (1354)
25 1sh7_A Extracellular subtilisi 100.0 1.6E-46 5.6E-51 402.7 22.7 234 175-669 21-257 (284)
26 2pwa_A Proteinase K; structure 100.0 2.6E-46 8.8E-51 400.2 16.4 225 184-669 28-260 (279)
27 2b6n_A Proteinase K; S binding 100.0 9.6E-46 3.3E-50 396.3 20.6 236 175-669 23-261 (278)
28 4dzt_A Aqualysin-1, aqualysin- 100.0 1.2E-45 4.2E-50 395.6 21.1 236 175-671 23-261 (276)
29 1p8j_A Furin precursor; prohor 100.0 6.2E-46 2.1E-50 426.9 19.2 296 169-709 25-330 (471)
30 2id4_A Kexin; KEX2, kexin, fur 100.0 4.9E-45 1.7E-49 422.2 16.9 283 175-709 46-342 (503)
31 2qtw_B Proprotein convertase s 100.0 6.9E-45 2.4E-49 413.2 17.5 283 183-709 22-314 (546)
32 3f7m_A Alkaline serine proteas 100.0 7.5E-45 2.6E-49 390.2 15.6 226 184-670 29-262 (279)
33 2oxa_A Extracellular serine pr 100.0 3.3E-44 1.1E-48 424.7 16.0 321 175-710 62-426 (600)
34 3hjr_A Extracellular serine pr 100.0 5.8E-42 2E-46 407.1 20.8 155 175-380 62-221 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 1.9E-25 6.4E-30 258.8 4.4 100 295-400 273-383 (552)
36 1ga6_A Serine-carboxyl protein 99.9 3.6E-22 1.2E-26 220.5 7.4 102 298-400 91-206 (372)
37 3edy_A Tripeptidyl-peptidase 1 99.0 9.4E-10 3.2E-14 126.5 10.9 100 298-400 263-374 (544)
38 3cnq_P Subtilisin BPN'; unclea 98.3 1.8E-06 6.2E-11 73.0 8.7 47 116-163 32-78 (80)
39 2w2n_P Proprotein convertase s 98.2 1.9E-06 6.7E-11 77.9 7.3 45 116-160 69-113 (114)
40 2qtw_A Proprotein convertase s 98.1 7.8E-06 2.7E-10 74.9 7.8 44 117-160 80-123 (124)
41 1v5i_B POIA1, IA-1=serine prot 97.9 4E-05 1.4E-09 63.9 8.9 43 118-160 30-75 (76)
42 3icu_A E3 ubiquitin-protein li 97.7 0.00012 4.2E-09 72.0 10.5 86 449-541 82-177 (194)
43 2z30_B TK-subtilisin; thermoco 95.9 0.006 2E-07 48.9 4.1 44 115-159 20-63 (65)
44 2ys4_A Hydrocephalus-inducing 95.4 0.028 9.7E-07 51.1 7.2 77 765-847 40-117 (122)
45 3qbt_B Inositol polyphosphate 94.7 0.35 1.2E-05 44.9 12.5 93 758-850 33-139 (140)
46 2ek8_A Aminopeptidase; metallo 93.5 0.21 7.3E-06 55.6 9.9 74 458-538 107-182 (421)
47 2r39_A FIXG-related protein; s 91.1 1.1 3.9E-05 40.0 9.8 53 768-821 33-86 (118)
48 2e6j_A Hydin protein; PAPD, st 88.6 1.7 5.8E-05 38.2 8.7 89 757-847 15-108 (112)
49 3lxu_X Tripeptidyl-peptidase 2 88.6 0.19 6.6E-06 62.6 3.2 25 183-207 32-56 (1354)
50 3qis_A Inositol polyphosphate 87.2 6 0.00021 42.8 13.7 94 758-851 36-143 (366)
51 1y9z_A Alkaline serine proteas 86.3 1.4 4.8E-05 49.2 8.3 29 571-612 183-211 (441)
52 3iib_A Peptidase M28; YP_92679 83.0 2.8 9.7E-05 46.8 8.9 79 461-540 124-216 (444)
53 3fed_A Glutamate carboxypeptid 81.5 1.1 3.7E-05 53.0 4.9 38 462-505 151-188 (707)
54 3kas_A Transferrin receptor pr 80.4 1.2 4.3E-05 51.9 4.8 39 462-506 128-166 (640)
55 2qsv_A Uncharacterized protein 73.9 24 0.00084 34.9 11.7 80 767-849 20-106 (220)
56 3idu_A Uncharacterized protein 73.4 15 0.00053 33.0 9.0 50 766-818 33-84 (127)
57 3zyz_A Beta-D-glucoside glucoh 62.2 26 0.00087 41.4 10.3 52 768-820 615-675 (713)
58 2qsv_A Uncharacterized protein 61.1 38 0.0013 33.5 10.0 87 757-845 124-217 (220)
59 2x41_A Beta-glucosidase; hydro 58.9 23 0.00079 41.9 9.2 68 752-820 596-678 (721)
60 3isy_A Bsupi, intracellular pr 58.3 58 0.002 28.9 9.4 69 766-834 18-105 (120)
61 3abz_A Beta-glucosidase I; gly 54.4 41 0.0014 40.5 10.4 67 750-817 714-795 (845)
62 2l04_A Major tail protein V; b 50.6 20 0.00067 30.3 4.8 28 794-821 8-35 (91)
63 3o0l_A Uncharacterized protein 48.2 38 0.0013 29.7 6.5 51 764-814 36-92 (112)
64 1msp_A MSP, major sperm protei 46.2 58 0.002 29.1 7.7 48 769-818 28-76 (126)
65 1z9l_A Vesicle-associated memb 44.7 64 0.0022 28.8 7.8 51 767-819 28-79 (128)
66 1wic_A Hypothetical protein ri 39.4 74 0.0025 29.5 7.4 49 769-819 38-87 (152)
67 2l0d_A Cell surface protein; s 38.9 72 0.0025 28.0 6.8 51 766-819 19-72 (114)
68 1m1s_A WR4; structural genomic 38.5 1.2E+02 0.0039 26.8 8.1 50 769-820 26-76 (116)
69 1wgl_A TOLL-interacting protei 35.4 22 0.00074 27.4 2.5 37 632-668 3-39 (59)
70 1row_A SSP-19, MSP-domain prot 34.0 1.2E+02 0.004 26.4 7.4 48 770-819 19-67 (109)
71 2cri_A Vesicle-associated memb 33.5 86 0.0029 28.8 6.8 49 769-819 34-83 (147)
72 1ni7_A ER75, hypothetical prot 25.5 51 0.0018 30.7 3.7 32 628-660 79-110 (155)
73 1w8o_A Bacterial sialidase; 3D 23.5 3.7E+02 0.013 30.3 11.6 77 756-837 364-445 (601)
74 3g0m_A Cysteine desulfuration 21.7 49 0.0017 30.3 2.7 33 626-659 70-102 (141)
75 1ifr_A Lamin A/C; immunoglobul 20.9 1.2E+02 0.004 26.9 5.0 42 772-814 21-68 (121)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=6e-99 Score=889.53 Aligned_cols=620 Identities=33% Similarity=0.522 Sum_probs=526.9
Q ss_pred CCCCcccCCCc--ccccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceee
Q 003005 163 THTPQFLGLPQ--GAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLI 240 (858)
Q Consensus 163 ~~~~~~~~~~~--~~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~ 240 (858)
+++++++|++. .+|.. +.+|+||+|||||||||++||+|.+... .+++..|++.|+.+.+|....||+|++
T Consensus 2 t~s~~flgl~~~~~~w~~----~~~G~gViVaViDTGId~~Hp~f~d~g~---~p~p~~wkg~c~~g~~f~~~~cN~kii 74 (649)
T 3i6s_A 2 THTSDFLKLNPSSGLWPA----SGLGQDVIVAVLDSGIWPESASFQDDGM---PEIPKRWKGICKPGTQFNASMCNRKLI 74 (649)
T ss_dssp CSHHHHTTCCSSSSHHHH----HGGGTTCEEEEEESCBCTTSGGGCCTTC---CCCCTTCCCCBCCBTTBCTTSCCSSEE
T ss_pred CCChHHcCCCCchhhHhc----cCCCCCCEEEEEccCCCCCChhhccCCC---CCCccccccccccCcccccccccccee
Confidence 56677888863 47877 6899999999999999999999999765 678899999999999999999999999
Q ss_pred eeeecchhhhhcCccCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHH
Q 003005 241 GARHFAASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAA 320 (858)
Q Consensus 241 g~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~ 320 (858)
+.++|..+..... .+...+..++.|.+||||||||||||+..++.+..|...+.+.||||+|+|+++|+++. .++..+
T Consensus 75 g~~~f~~~~~~~~-~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~-~g~~~~ 152 (649)
T 3i6s_A 75 GANYFNKGILAND-PTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFN-EGTFTS 152 (649)
T ss_dssp EEEECCHHHHHHC-TTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEET-TEECHH
T ss_pred eeEeccCcccccc-cccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCC-CCCCHH
Confidence 9999997754433 44445567788999999999999999987666666776677899999999999999987 458899
Q ss_pred HHHHHHHHHHHCCCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCceEEEeeccc
Q 003005 321 DVVAAIDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAASH 400 (858)
Q Consensus 321 ~i~~ai~~a~~~g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~ 400 (858)
++++||+||+++|+||||||||.... ..+.+.+..+++.|.++|++||+||||+|+...++++.+||+|+|||++.
T Consensus 153 ~i~~Ai~~A~~~gvdVIn~SlG~~~~----~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~ 228 (649)
T 3i6s_A 153 DLIAAMDQAVADGVDMISISYGYRFI----PLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHT 228 (649)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCCSC----CGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEeCCccCCc----ccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeec
Confidence 99999999999999999999998632 44678999999999999999999999999998899999999999999999
Q ss_pred CceeeeEEEeCCceEEEeeecCCCC--CceeEEEEcccccCCCCcccCCCCccccCCCCCCccccc--cceEEEEEeccc
Q 003005 401 DRIYTNSIILGNSLTISGVGLAPGT--DKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLV--QGNLLICSYSIR 476 (858)
Q Consensus 401 ~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~--~Gkivl~~~~~~ 476 (858)
++.|+..+.+++++++.+.++.+.. ...+|+++.. ....|.. ..++...+ +|||++|.+
T Consensus 229 dr~f~~~~~lgng~~~~g~sl~~~~~~~~~~plv~~~-------------~~~~C~~-~~l~~~~vdl~GkIvlc~~--- 291 (649)
T 3i6s_A 229 DRTFAGTLTLGNGLKIRGWSLFPARAFVRDSPVIYNK-------------TLSDCSS-EELLSQVENPENTIVICDD--- 291 (649)
T ss_dssp SCEEEEEEEETTSCEEEEECCCSSCBCEEEEEEECCT-------------TTTTCCC-HHHHTTSSSGGGCEEEECC---
T ss_pred ccceeeEEEeCCCcEEeeeecccCcccCcceeeEecc-------------ccccccc-ccccccccccCCcEEEEeC---
Confidence 9999999999999999999887765 5678888764 2456763 34555556 999999998
Q ss_pred cccCcchHHHHHHHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeee
Q 003005 477 FVLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAV 556 (858)
Q Consensus 477 ~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 556 (858)
|.+.+.++..+++.+|+.|+|++|+. .......+.+|.+.+ +..++..|++|+++.... +
T Consensus 292 ---g~~~~~~k~~~~~~~Ga~g~i~~n~~----~~~~~~~~~~P~~~v-~~~~g~~i~~yi~s~~~~------------~ 351 (649)
T 3i6s_A 292 ---NGDFSDQMRIITRARLKAAIFISEDP----GVFRSATFPNPGVVV-NKKEGKQVINYVKNSVTP------------T 351 (649)
T ss_dssp ---CSCHHHHHHHHHHHTCSEEEEECCCG----GGGGCCCCCSCEEEE-CHHHHHHHHHHHHTCSSC------------E
T ss_pred ---CCccHHHHHHHHHhcCceEEEEecCc----cccccccCcCCEEEE-cHHHHHHHHHHHhcCCCc------------e
Confidence 67889999999999999999999986 233456788999888 588999999999886532 2
Q ss_pred EEEecccccccCCCCCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccc----cCccceeecccC
Q 003005 557 ACILGGLKANFSNSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEF----QGESFAMMSGTS 632 (858)
Q Consensus 557 ~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~----~~~~y~~~sGTS 632 (858)
+++....+.......+.++.||||||+.+ .++++||||+|||++|+++++......... ....|..|||||
T Consensus 352 a~i~~~~t~~~~~~~~~va~FSSrGP~~~-----~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTS 426 (649)
T 3i6s_A 352 ATITFQETYLDTKPAPVVAASSARGPSRS-----YLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTS 426 (649)
T ss_dssp EEEEEEEEECCCSSCCEECTTSCCSSCTT-----CTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHH
T ss_pred EEEeecceeeccCCCCcccccCCCCCCCC-----CCCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccc
Confidence 33333333334456789999999999986 458999999999999999997653321111 225899999999
Q ss_pred chhHHHHHHHHHHHHhCCCCCHHHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccccccCCCCee
Q 003005 633 MAAPHIAGLAALIKQKFPSFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNATASLDPGLV 712 (858)
Q Consensus 633 MAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~~v 712 (858)
||||||||++|||+|+||+|+|++||++||+||.+++..+.++.+.. ...++.++.||+|+||+.+|++|+||
T Consensus 427 MAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~~~~-------~~~~a~~~~~GaG~vn~~~A~~pGLv 499 (649)
T 3i6s_A 427 MAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKDSD-------NNKAATPLDMGAGHVDPNRALDPGLV 499 (649)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCEETT-------TSSBCCHHHHTTCBCCHHHHTCCSEE
T ss_pred cccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCcccccc-------cCCcCCcCCCCeeeeCHHHhcCcccc
Confidence 99999999999999999999999999999999999999998887642 35577889999999999999999999
Q ss_pred eeCCcchhhhhccccCCCcceeeeccCcc----cccCCCCCCCCCCCCCeEEEee-cCcc-----eEEEEEEEEcCC-Cc
Q 003005 713 FDASYNDYMSFLCGINGSSPVVLNYTGQN----CWAYNSTISGADLNLPSITIAR-LNQS-----RTVQRTLTNIAG-NE 781 (858)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~n~~si~~~~-~~~~-----~~~~~tv~n~~~-~~ 781 (858)
||.+.+||+.|||.++++...|+.+++.. |+. .+.+||||||++.. ..+. ++++|||||++. +.
T Consensus 500 yd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~-----~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~ 574 (649)
T 3i6s_A 500 YDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN-----PSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAA 574 (649)
T ss_dssp CCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC-----CCCCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC--CE
T ss_pred ccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC-----chhhcCCCcEEeecccCCCCccceEEEEEEEEEeCCCCc
Confidence 99999999999999999888888887754 863 46799999999987 5666 899999999998 89
Q ss_pred eEEEEeecCCcceEEEeecEEEEe-CCCEEEEEEEEEEecC-CCCeEEEEEEEEeC-CccEEEEeEEEEEE
Q 003005 782 TYSVGWSAPYGVSMKVSPTHFSIA-SGEKQVLNVFFNATTS-GTAASFGRIGLFGN-QGHIVNIPLSVVAR 849 (858)
Q Consensus 782 ty~~~~~~~~~~~v~~~p~~~tl~-~g~s~~~~v~~~~~~~-~~~~~~G~i~~~~~-~~~~l~iP~~~~~~ 849 (858)
+|++++..|.|++|+|+|++|++. .||+++|+|+|+.... .+.+.+|+|+|+++ +.|.|++|++++..
T Consensus 575 ~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 575 TYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp EEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred EEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCCceEEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 999999999999999999999996 7999999999998754 45688999999974 67999999998765
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=1.2e-92 Score=839.05 Aligned_cols=612 Identities=32% Similarity=0.527 Sum_probs=484.1
Q ss_pred CCCCCcccCCCcccccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeee
Q 003005 162 TTHTPQFLGLPQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIG 241 (858)
Q Consensus 162 ~~~~~~~~~~~~~~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g 241 (858)
++++++|+|+++..|.. ..+|+||+|||||||||++||+|.+... .+++..|++.|+.+.+| .||+|+++
T Consensus 1 tt~s~~flGl~~~~~~~----~~~G~gViVgViDTGId~~Hp~f~d~g~---~~~~~~w~g~~~~~~~~---~~n~k~ig 70 (621)
T 3vta_A 1 TTRSWDFLGFPLTVPRR----SQVESNIVVGVLDTGIWPESPSFDDEGF---SPPPPKWKGTCETSNNF---RCNRKIIG 70 (621)
T ss_dssp CCSHHHHTTCCTTCCCC----HHHHTTCEEEEEESCBCTTSGGGCCTTC---CCCCTTCCCCBCCSSSC---CCCSSEEE
T ss_pred CCCChhHcCCCcccccc----CCCCCCCEEEEEecCCCCCChhhcCCCC---CCcccccccccccCCCc---ccCcceee
Confidence 35778899998877776 5789999999999999999999998765 67888999999998877 59999999
Q ss_pred eeecchhhhhcCccCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHH
Q 003005 242 ARHFAASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAAD 321 (858)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~ 321 (858)
+++|..+.. ....+...|+|++||||||||||||+........|...+.+.||||+|+|++||+|++ .++..++
T Consensus 71 ~~~~~~~~~-----~~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~-~g~~~~d 144 (621)
T 3vta_A 71 ARSYHIGRP-----ISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWN-DGCSDTD 144 (621)
T ss_dssp EEECCCSSS-----CCTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEET-TEECHHH
T ss_pred eeecccCCc-----cCCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecC-CCCCHHH
Confidence 999976521 1223456788999999999999999876665556666677899999999999999987 5688899
Q ss_pred HHHHHHHHHHCCCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCceEEEeecccC
Q 003005 322 VVAAIDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAASHD 401 (858)
Q Consensus 322 i~~ai~~a~~~g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~ 401 (858)
+++||+||+++|+||||||||+..+. ....+.+..+++.|.++|+++|+||||+|+...++++.+||+++|++.+.+
T Consensus 145 i~~a~~~a~~~g~dVin~SlG~~~~~---~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d 221 (621)
T 3vta_A 145 ILAAYDDAIADGVDIISLSVGGANPR---HYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMD 221 (621)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCCCGG---GGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCS
T ss_pred HHHHHHHHHHhCCCEEEecCCCCCCC---CcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeecc
Confidence 99999999999999999999986543 345688999999999999999999999999999999999999999999999
Q ss_pred ceeeeEEEeCCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCc
Q 003005 402 RIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGL 481 (858)
Q Consensus 402 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~ 481 (858)
+.+...+.++++..+.+..+.......++++...+....... ......|. ...+....++|||++|.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~v~gkivl~~~~------- 290 (621)
T 3vta_A 222 RKFVTQVQIGNGQSFQGVSINTFDNQYYPLVSGRDIPNTGFD---KSTSRFCT-DKSVNPNLLKGKIVVCEAS------- 290 (621)
T ss_dssp EEEEEEEEETTSCEEEEBCCCCSCCEEECEEETTTSCCTTCC---HHHHTTTC-TTCSCGGGTTTSEEECSSC-------
T ss_pred ccceeeEEeccCceeeeeecccCCCccccccccccccccccc---cccccccc-ccccccccccceEEEEecC-------
Confidence 999999999999999998887776777888776654322211 11233454 4667788899999999873
Q ss_pred chHHHHHHHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEec
Q 003005 482 STIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILG 561 (858)
Q Consensus 482 ~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 561 (858)
+..+.......|+.+++++++... ....+.+|...+ ...++..++.+........ ..+..
T Consensus 291 --~~~~~~~~~~~Ga~gvi~~~~~~~-----~~~~~~lP~~~v-~~~~g~~i~~~~~~~~~~~------------a~~~~ 350 (621)
T 3vta_A 291 --FGPHEFFKSLDGAAGVLMTSNTRD-----YADSYPLPSSVL-DPNDLLATLRYIYSIRSPG------------ATIFK 350 (621)
T ss_dssp --CCHHHHHHHHTTCSEEEEECSCCS-----SCCCCSSSEEEE-CHHHHHHHHHHHHHHSSCC------------EEECC
T ss_pred --CChhHHhhhhcceeEEEEEecCCC-----cccccccceEEE-CHHHHHHHHHHHhccCCcc------------eEEec
Confidence 234556777899999999987543 234567888877 6788889998887654322 11111
Q ss_pred ccccccCCCCCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHH
Q 003005 562 GLKANFSNSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGL 641 (858)
Q Consensus 562 ~~~~~~~~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~ 641 (858)
.........+.++.||||||+.. ..+++||||+|||++|+|+++..........+..|..|||||||||||||+
T Consensus 351 -~~~~~~~~~~~va~FSSrGP~~~-----~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~~~~y~~~SGTSMAaPhVAGv 424 (621)
T 3vta_A 351 -STTILNASAPVVVSFSSRGPNRA-----TKDVIKPDISGPGVEILAAWPSVAPVGGIRRNTLFNIISGTSMSCPHITGI 424 (621)
T ss_dssp -CEEEECTTCCCBCTTSCCCSCTT-----CTTSCSCCEEEECSSEEEECCSSSCBTTBCCCCSEEEECSHHHHHHHHHHH
T ss_pred -ceEeccCCCCceeeecCCCCCCC-----CCCeeccccccCCcceEeecCccccccCcCCCCcceEecCccccchhhhhH
Confidence 11123345678999999999874 247999999999999999998655433333456899999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccccccCCCCeeeeCCcchhh
Q 003005 642 AALIKQKFPSFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNATASLDPGLVFDASYNDYM 721 (858)
Q Consensus 642 aALl~q~~P~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~~v~~~~~~~~~ 721 (858)
+|||||+||+|+|++||++||+||++++..+. ++.++.||+|+||+.+|++|+||||.+..||+
T Consensus 425 aALl~q~~P~~spa~IksaLmtTA~~~~~~~~----------------~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~ 488 (621)
T 3vta_A 425 ATYVKTYNPTWSPAAIKSALMTTASPMNARFN----------------PQAEFAYGSGHVNPLKAVRPGLVYDANESDYV 488 (621)
T ss_dssp HHHHHHHCTTCCHHHHHHHHHHTCBCCCTTTC----------------TTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC
T ss_pred HHHHHHHCCCCCHHHHHHHHHhcCCcccccCC----------------CCCchhcCCCccCHHHhcCCCeEeecccchhh
Confidence 99999999999999999999999998765443 45678999999999999999999999999999
Q ss_pred hhccccCCCcceeeeccC--cccccCCCCCCCCCCCCCeEEEe---ecCcceEEEEEEEEcCC-CceEEEEeecCCcceE
Q 003005 722 SFLCGINGSSPVVLNYTG--QNCWAYNSTISGADLNLPSITIA---RLNQSRTVQRTLTNIAG-NETYSVGWSAPYGVSM 795 (858)
Q Consensus 722 ~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~n~~si~~~---~~~~~~~~~~tv~n~~~-~~ty~~~~~~~~~~~v 795 (858)
.|+|.++++...|+..++ ..|+.. ......+||+|||++. +...+++++|||+|++. ..||++++++|.|++|
T Consensus 489 ~~lc~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v 567 (621)
T 3vta_A 489 KFLCGQGYNTQAVRRITGDYSACTSG-NTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTI 567 (621)
T ss_dssp ------------------------------CGGGSCCSSEEEECCSSCCEEEEEEEEEEECSSSCEEEEEEEECCSSEEE
T ss_pred hhhcccCCCchhheeeeccccccCCC-CcCcccccccccEEEEccCCCceEEEEEEEEEccCCCCeEEEEEEECCCCcEE
Confidence 999999998888877766 345431 2334678999999985 44457889999999999 9999999999999999
Q ss_pred EEeecEEEEe-CCCEEEEEEEEEEecCCCCeEEEEEEEEeCCccEEEEeEEEEE
Q 003005 796 KVSPTHFSIA-SGEKQVLNVFFNATTSGTAASFGRIGLFGNQGHIVNIPLSVVA 848 (858)
Q Consensus 796 ~~~p~~~tl~-~g~s~~~~v~~~~~~~~~~~~~G~i~~~~~~~~~l~iP~~~~~ 848 (858)
+|+|.+|+++ .||+++|+|+|+.. ..+.+.+|+|+|+ ++.|.|++|+++.+
T Consensus 568 ~V~P~~l~f~~~~~~~~~~vt~~~~-~~~~~~~g~l~w~-d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 568 SVNPNVLSFNGLGDRKSFTLTVRGS-IKGFVVSASLVWS-DGVHYVRSPITITS 619 (621)
T ss_dssp EEESSEEEECSTTCEEEEEEEEEEC-CCSSEEEEEEEEE-CSSCCCEEEEEEEC
T ss_pred EEecCEEEEcCCCcEEEEEEEEEec-CCCceEEEEEEEE-cCCEEEEeCEEEEE
Confidence 9999999995 58999999999854 4577899999997 57899999999864
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=2.5e-75 Score=717.88 Aligned_cols=544 Identities=19% Similarity=0.236 Sum_probs=404.7
Q ss_pred ccCCCcccccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCcccccc----------CCCCCCCCCc
Q 003005 168 FLGLPQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVT----------RDFPSGSCNR 237 (858)
Q Consensus 168 ~~~~~~~~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~n~ 237 (858)
+++++. +|.. +++|+||+|||||||||++||+|.+.. .|++.|..+ ......+||+
T Consensus 3 ~i~~~~-~w~~----~~~G~GV~VaVIDTGId~~Hp~f~~~~---------~~~~~~~~~~~~~~~~~~~g~~~g~~~n~ 68 (926)
T 1xf1_A 3 PSQVKT-LQEK----AGKGAGTVVAVIDAGFDKNHEAWRLTD---------KTKARYQSKEDLEKAKKEHGITYGEWVND 68 (926)
T ss_dssp TTCCHH-HHHH----HCSCTTCEEEEEESCCTTCCCCCSCCS---------CCCSSCCHHHHHHHHHHTTTCCCCBCCSS
T ss_pred ccccHH-HHhc----cCCCCCcEEEEEecCCCCCCHhHcCCC---------CCcccccchhhhcccccccCcccccccCc
Confidence 456655 8876 689999999999999999999999643 344444321 1123458999
Q ss_pred eeeeeeecchhhhhcCccCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCC-
Q 003005 238 KLIGARHFAASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFG- 316 (858)
Q Consensus 238 kv~g~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~- 316 (858)
|++++++|.++ ... .|..||||||||||||+...... ..+.+.||||+|+|+++|+++....
T Consensus 69 Kii~~~~~~~~------------~~~-~D~~gHGThVAgiiAg~~~~~~~----~~~~~~GvAP~A~l~~~kv~~~~g~~ 131 (926)
T 1xf1_A 69 KVAYYHDYSKD------------GKT-AVDQEHGTHVSGILSGNAPSETK----EPYRLEGAMPEAQLLLMRVEIVNGLA 131 (926)
T ss_dssp SCCEEEESCCC------------SCC-CCSSTTTTHHHHSSCCCCCCCCS----CSCCTTTTCTTSEEEEEECCCCSCHH
T ss_pred ccceeeccccC------------CCC-CCCCCcHHHHHHHHhCCCccCcc----cCCceEEECCCCEEEEEEeecCCCCC
Confidence 99999998753 122 28899999999999998633211 1245789999999999999987332
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCC--------------
Q 003005 317 GFAADVVAAIDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSP-------------- 382 (858)
Q Consensus 317 ~~~~~i~~ai~~a~~~g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-------------- 382 (858)
+..+++++||+||+++|++|||||||+..... ..+.+.+..+++.|.++|++||+||||+|...
T Consensus 132 ~~~~~i~~Ai~~Ai~~gvdVIn~SlG~~~~~~--~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~ 209 (926)
T 1xf1_A 132 DYARNYAQAIRDAINLGAKVINMSFGNAALAY--ANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYG 209 (926)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECCSSCCCTT--CCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCB
T ss_pred CcHHHHHHHHHHHHHhCCcEEEECCCCCCCCc--cccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcc
Confidence 34578999999999999999999999864321 23456788999999999999999999999631
Q ss_pred -CCCCCCCCceEEEeecccCceeeeEEEe-CCceEEEee---ecCCCC-CceeEEEEcccccCCCCcccCCCCccccCCC
Q 003005 383 -KSMSSFSPWIFTVGAASHDRIYTNSIIL-GNSLTISGV---GLAPGT-DKMYTLISALHALNNNTTTTDDMYVGECQDS 456 (858)
Q Consensus 383 -~~~~~~~p~vitVgA~~~~~~~~~~~~~-~~g~~~~~~---~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~ 456 (858)
...|+.+||+|+|||++.++.+...+.+ +++...... ...+.. ...|++++... .|. .
T Consensus 210 tv~~PA~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~---------------g~~-~ 273 (926)
T 1xf1_A 210 VVGTPAAADSTLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR---------------GTK-E 273 (926)
T ss_dssp CCCSCTTTCCSEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT---------------SCS-T
T ss_pred eecCcccCCceEEEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC---------------CCC-c
Confidence 2345668999999999999998888776 444322222 112222 56788887543 354 2
Q ss_pred CCCccccccceEEEEEeccccccCcchHHHHHHHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHH
Q 003005 457 SNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQY 536 (858)
Q Consensus 457 ~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~ 536 (858)
..+ .+++|||++|.| |.|.+.++..++..+||.|+|++|+..............+|...+ +..++..|..
T Consensus 274 ~~~--~~v~Gkivl~~r------g~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i-~~~~g~~l~~- 343 (926)
T 1xf1_A 274 DDF--KDVKGKIALIER------GDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFI-SRKDGLLLKD- 343 (926)
T ss_dssp TTT--TTCTTSEEEEEC------CSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEE-CHHHHHHHHH-
T ss_pred cch--hhcCCeEEEEEC------CCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEE-eHHHHHHHHh-
Confidence 233 589999999998 678899999999999999999998765432222345677898877 6677777763
Q ss_pred HhcccccccccceEEeeeeeEEEecccccccCCCCCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCC
Q 003005 537 YNSSLERDEVTKKIIKFGAVACILGGLKANFSNSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTD 616 (858)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~ 616 (858)
.+ ...+++.... ........+.++.||||||+.+ +++||||+|||++|+|++
T Consensus 344 ---~~------~~ti~~~~~~------~~~~~~~~~~~a~FSSrGp~~~-------~~lKPDI~APG~~I~sa~------ 395 (926)
T 1xf1_A 344 ---NP------QKTITFNATP------KVLPTASGTKLSRFSSWGLTAD-------GNIKPDIAAPGQDILSSV------ 395 (926)
T ss_dssp ---CS------SCEEEECSSC------EEEECSSCSBCCTTSCCCBCTT-------SCBSCCEEEECCCEEESS------
T ss_pred ---CC------ceEEEecccc------eecccCCcceeccccCCCCCCC-------CccCceEECCCCCEEeec------
Confidence 11 1123332221 1112344678999999999976 799999999999999998
Q ss_pred CccccCccceeecccCchhHHHHHHHHHHHH----hCCCCCHHH----HHHHHHccccccccCCCccccccccCCCCCCC
Q 003005 617 SVEFQGESFAMMSGTSMAAPHIAGLAALIKQ----KFPSFSPSA----IASALSTSATLYDKNGGPIMAQRAYAKPDENQ 688 (858)
Q Consensus 617 ~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q----~~P~lsp~~----ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~ 688 (858)
+++.|..|||||||||||||++|||+| +||+|+|+| ||++||+||+++...+. .
T Consensus 396 ----~~~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~~--------------~ 457 (926)
T 1xf1_A 396 ----ANNKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDEDE--------------K 457 (926)
T ss_dssp ----SCSSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGGG--------------T
T ss_pred ----cCCcceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHhcCCCcccCCC--------------C
Confidence 456899999999999999999999964 699999997 99999999998754321 1
Q ss_pred CCCCCCccccccccccccCCCCeeeeCCcchhhhhccccCCCcceeeeccCcccccCCCCCCCCCCCCCeEEEeecCcce
Q 003005 689 SPATPFDMGSGFVNATASLDPGLVFDASYNDYMSFLCGINGSSPVVLNYTGQNCWAYNSTISGADLNLPSITIARLNQSR 768 (858)
Q Consensus 689 ~~~~~~~~G~G~vd~~~A~~~~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~n~~si~~~~~~~~~ 768 (858)
..+++++||+|+||+.+|+++.+. +|..++. ..+|.+.++..+.
T Consensus 458 ~~~~~~~~G~G~vn~~~A~~~~~~-----------l~~~~~~-------------------------~~~i~l~~~~~~~ 501 (926)
T 1xf1_A 458 AYFSPRQQGAGAVDAKKASAATMY-----------VTDKDNT-------------------------SSKVHLNNVSDKF 501 (926)
T ss_dssp EECCHHHHTTCBCCHHHHHHCSEE-----------EEESSSS-------------------------CSCEEEEEECSEE
T ss_pred ccCChhccCCCccCHHHhcCCCeE-----------EEcCCCC-------------------------cceeeccccCccE
Confidence 235678999999999999998653 3433321 1245566666677
Q ss_pred EEEEEEEEcCC-C--ceEEEEeec--CCcceEEEe--------ecEEEEeCCCEEEEEEEEEEec---------CCCCeE
Q 003005 769 TVQRTLTNIAG-N--ETYSVGWSA--PYGVSMKVS--------PTHFSIASGEKQVLNVFFNATT---------SGTAAS 826 (858)
Q Consensus 769 ~~~~tv~n~~~-~--~ty~~~~~~--~~~~~v~~~--------p~~~tl~~g~s~~~~v~~~~~~---------~~~~~~ 826 (858)
+++|||+|+++ . .+|++++.. +.+..+++. +.+|||+|||+++|+|+|+++. ..+.++
T Consensus 502 ~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~ 581 (926)
T 1xf1_A 502 EVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFL 581 (926)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEE
T ss_pred EEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCCCEEEEEEEEEcCccchhhcccccCCcEE
Confidence 88999999997 4 456666543 445566554 4579999999999999999862 134689
Q ss_pred EEEEEEEeCCc--cEEEEeEEEEEEeec
Q 003005 827 FGRIGLFGNQG--HIVNIPLSVVARLSY 852 (858)
Q Consensus 827 ~G~i~~~~~~~--~~l~iP~~~~~~~~~ 852 (858)
+|+|+|+++++ +.|++||+++.++-.
T Consensus 582 ~G~i~~~~~~~~~~~v~~P~~~~~g~~~ 609 (926)
T 1xf1_A 582 EGFVRFKQDPTKEELMSIPYIGFRGDFG 609 (926)
T ss_dssp EEEEEEESSTTSCCCEEEEEEEEESCGG
T ss_pred EEEEEEEeCCCCCCEEEeeeEEEecCcc
Confidence 99999996433 459999999998654
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=9.2e-58 Score=530.38 Aligned_cols=339 Identities=32% Similarity=0.504 Sum_probs=271.8
Q ss_pred ceeEEEEEcceeeEEEEEcCHHHHHHH-----------hcCCCeeEEEeCccccccCCC-----CCcccCCCcccccccC
Q 003005 117 KYLKLYSYHYLINGFSVFVTPQQAEKL-----------SRRREVANVVSDFSVRTATTH-----TPQFLGLPQGAWIQEG 180 (858)
Q Consensus 117 ~~~~~~~~~~~~ng~~v~~~~~~l~~L-----------~~~p~V~~v~~~~~~~~~~~~-----~~~~~~~~~~~w~~~~ 180 (858)
+.+++++|. .++||+++++.+++++| +++|+|++|+++..+++.... ....++++. +|..
T Consensus 59 g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 134 (539)
T 3afg_A 59 GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAVETEGLDESAAQVMATN-MWNL-- 134 (539)
T ss_dssp TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC-----------CCBCSC-CBCC--
T ss_pred CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEecccccccCccccCCccccccCcHh-HHhc--
Confidence 467888996 79999999999999999 899999999999988764321 112233333 6665
Q ss_pred CCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCccCCCCC
Q 003005 181 GYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSSQD 260 (858)
Q Consensus 181 ~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~~~~~~~ 260 (858)
+++|+||+|||||||||++||+|.++ +++.++|.++
T Consensus 135 --g~~G~gv~VaViDtGid~~Hpdl~~~------------------------------i~~~~d~~~~------------ 170 (539)
T 3afg_A 135 --GYDGSGITIGIIDTGIDASHPDLQGK------------------------------VIGWVDFVNG------------ 170 (539)
T ss_dssp --SCCCTTCEEEEEESBCCTTSGGGTTT------------------------------EEEEEETTTC------------
T ss_pred --CCCCCCcEEEEEecCCCCCChHHhCC------------------------------EeeeEECCCC------------
Confidence 78999999999999999999999863 4444555432
Q ss_pred CCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHHC----CCCE
Q 003005 261 YASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQD----GVDI 336 (858)
Q Consensus 261 ~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~----g~~V 336 (858)
...+.|++||||||||||+|+.... .+.+.||||+|+|+++|+++..+.+..++++++|+||+++ |++|
T Consensus 171 ~~~~~D~~gHGThVAgiiag~~~~~-------~g~~~GvAp~A~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~V 243 (539)
T 3afg_A 171 KTTPYDDNGHGTHVASIAAGTGAAS-------NGKYKGMAPGAKLVGIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKV 243 (539)
T ss_dssp CSSCCBSSSHHHHHHHHHHCCCGGG-------TTTTCCSCTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEE
T ss_pred CCCCCCCCCCHHHHHHHHhCcCccC-------CCCEEEECCCCEEEEEEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcE
Confidence 1346788999999999999874221 1346799999999999999875457889999999999975 8999
Q ss_pred EEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCC--CCCCCCCCceEEEeecccCceeeeEEEeCCce
Q 003005 337 ISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSP--KSMSSFSPWIFTVGAASHDRIYTNSIILGNSL 414 (858)
Q Consensus 337 IN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~--~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~ 414 (858)
||||||..... ...+.+..+++.+.++|++||+||||+|... ...|+..+++|+|||++.+
T Consensus 244 in~SlG~~~~~----~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~~------------- 306 (539)
T 3afg_A 244 INLSLGSSQSS----DGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDKY------------- 306 (539)
T ss_dssp EEECCCCCSCC----CSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECTT-------------
T ss_pred EEeCCCCCCCC----ccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeeecCC-------------
Confidence 99999986432 2357889999999999999999999999854 3467888999999986421
Q ss_pred EEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHHHHHHHHhC
Q 003005 415 TISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNL 494 (858)
Q Consensus 415 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~ 494 (858)
T Consensus 307 -------------------------------------------------------------------------------- 306 (539)
T 3afg_A 307 -------------------------------------------------------------------------------- 306 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEecccccccCCCCCcc
Q 003005 495 SAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANFSNSAPKI 574 (858)
Q Consensus 495 Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 574 (858)
+.+
T Consensus 307 -----------------------------------------------------------------------------~~~ 309 (539)
T 3afg_A 307 -----------------------------------------------------------------------------DVI 309 (539)
T ss_dssp -----------------------------------------------------------------------------SCB
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 237
Q ss_pred ccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHHHHHHhCCCCCH
Q 003005 575 MYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQKFPSFSP 654 (858)
Q Consensus 575 a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~lsp 654 (858)
+.||||||+.+ +++||||+|||++|+++++...... ......|..++|||||||||||++|||+|++|+|+|
T Consensus 310 a~fSs~Gp~~~-------~~~kpdi~APG~~I~s~~~~~~~~~-~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~ 381 (539)
T 3afg_A 310 TDFSSRGPTAD-------NRLKPEVVAPGNWIIAARASGTSMG-QPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTP 381 (539)
T ss_dssp CSSSCCCCCTT-------CBCCCSEEEECSSEEEECCTTCCCS-EECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCH
T ss_pred ccccCCCCCCC-------CCCcccEecCcCCEEeeccCCCCCC-CCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCH
Confidence 88999999986 7999999999999999986532110 011236999999999999999999999999999999
Q ss_pred HHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccccccCCCC
Q 003005 655 SAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNATASLDPG 710 (858)
Q Consensus 655 ~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~ 710 (858)
++||++|++||+++...+ .++..||+|+||+.+|++..
T Consensus 382 ~~vk~~L~~tA~~~~~~~------------------~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 382 DKVKTALIETADIVKPDE------------------IADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp HHHHHHHHHHSBCSSGGG------------------CSBTTTBTCBCCHHHHHTGG
T ss_pred HHHHHHHHhhCccCCCCC------------------CCccCccCCccCHHHHhhhc
Confidence 999999999999875322 23468999999999999853
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=1.4e-56 Score=504.55 Aligned_cols=319 Identities=25% Similarity=0.378 Sum_probs=259.3
Q ss_pred ceeEEEEEcceeeEEEEEcCHHHHHHHhcCCCeeEEEeCccccccCCCC-----------Ccc-----cCCCcccccccC
Q 003005 117 KYLKLYSYHYLINGFSVFVTPQQAEKLSRRREVANVVSDFSVRTATTHT-----------PQF-----LGLPQGAWIQEG 180 (858)
Q Consensus 117 ~~~~~~~~~~~~ng~~v~~~~~~l~~L~~~p~V~~v~~~~~~~~~~~~~-----------~~~-----~~~~~~~w~~~~ 180 (858)
+.+++++|. .+++++++++++++++|+++|+|++|++++.+++..... ... ++++. +|..
T Consensus 23 g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~~-~w~~-- 98 (395)
T 2z2z_A 23 GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIERVKAPS-VWSI-- 98 (395)
T ss_dssp TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC------CCSCCCCHHHHHTTCGG-GGGT--
T ss_pred CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCCcccccccCccccCCcchhhcCHHH-HHhh--
Confidence 568889997 599999999999999999999999999999887643211 111 23323 5665
Q ss_pred CCCCCCCC--cEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCccCCC
Q 003005 181 GYETAGEG--VVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSS 258 (858)
Q Consensus 181 ~~~~~G~G--v~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~~~~~ 258 (858)
+ +|+| |+|||||||||++||+|.++. ...++|..+.. .
T Consensus 99 --~-~G~g~~v~VaViDtGid~~Hp~l~~~~------------------------------~~~~~~~~~~~-----~-- 138 (395)
T 2z2z_A 99 --T-DGSVSVIQVAVLDTGVDYDHPDLAANI------------------------------AWCVSTLRGKV-----S-- 138 (395)
T ss_dssp --C-SSCCTTCEEEEEESCBCTTCTTTGGGE------------------------------EEEEECGGGCC-----B--
T ss_pred --c-CCCCCcEEEEEEcCCCCCCChhHhhcc------------------------------ccCccccCCcc-----c--
Confidence 4 9999 999999999999999999742 23334433210 0
Q ss_pred CCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHHC------
Q 003005 259 QDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQD------ 332 (858)
Q Consensus 259 ~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~------ 332 (858)
.+...+.|.+||||||||||+|..+ + .++.||||+|+|+.+|+++..+.+..++++++|+||+++
T Consensus 139 ~~~~~~~d~~gHGT~vAgiia~~~n-~--------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~ 209 (395)
T 2z2z_A 139 TKLRDCADQNGHGTHVIGTIAALNN-D--------IGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVAD 209 (395)
T ss_dssp CCHHHHBCSSSHHHHHHHHHHCCCS-S--------SSCCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSS
T ss_pred CCCCCCCCCCCCHHHHHHHHHeecC-C--------CceEEECCCCEEEEEEEecCCCCccHHHHHHHHHHHHhCcccccc
Confidence 0001235789999999999998732 1 235799999999999999875557889999999999998
Q ss_pred --------------CCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCceEEEeec
Q 003005 333 --------------GVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAA 398 (858)
Q Consensus 333 --------------g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~ 398 (858)
+++|||||||.... ...+..+++.+.++|++||+||||+|.....+|+..+++|+|||+
T Consensus 210 ~~~~~~~~~~~~~~~~~Vin~S~G~~~~-------~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~ 282 (395)
T 2z2z_A 210 KDGDGIIAGDPDDDAAEVISMSLGGPAD-------DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAI 282 (395)
T ss_dssp TTCSSCCTTCTTSCCCSEEEECEEBSCC-------CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEE
T ss_pred ccccccccccccCCCCeEEEecCCCCCC-------CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEe
Confidence 99999999997532 357888999999999999999999999878889999999999996
Q ss_pred ccCceeeeEEEeCCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccc
Q 003005 399 SHDRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFV 478 (858)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~ 478 (858)
+.+
T Consensus 283 ~~~----------------------------------------------------------------------------- 285 (395)
T 2z2z_A 283 DSN----------------------------------------------------------------------------- 285 (395)
T ss_dssp CTT-----------------------------------------------------------------------------
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 422
Q ss_pred cCcchHHHHHHHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEE
Q 003005 479 LGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVAC 558 (858)
Q Consensus 479 ~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (858)
T Consensus 286 -------------------------------------------------------------------------------- 285 (395)
T 2z2z_A 286 -------------------------------------------------------------------------------- 285 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EecccccccCCCCCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHH
Q 003005 559 ILGGLKANFSNSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHI 638 (858)
Q Consensus 559 i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~V 638 (858)
+.++.||++|| +|+|||++|+|++ +++.|..++|||||||||
T Consensus 286 -------------~~~a~fS~~G~---------------~v~APG~~i~s~~----------~~~~y~~~sGTS~AaP~V 327 (395)
T 2z2z_A 286 -------------DNIASFSNRQP---------------EVSAPGVDILSTY----------PDDSYETLMGTAMATPHV 327 (395)
T ss_dssp -------------SCBCTTSCSSC---------------SEEEECSSEEEEE----------TTTEEEEEESHHHHHHHH
T ss_pred -------------CCCCcccCCCC---------------CEEeCCCCeeeec----------CCCceEecCCHHHHHHHH
Confidence 24788999997 5799999999998 456899999999999999
Q ss_pred HHHHHHHHHhCC-------------CCCHHHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccccc
Q 003005 639 AGLAALIKQKFP-------------SFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNATA 705 (858)
Q Consensus 639 AG~aALl~q~~P-------------~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~ 705 (858)
||++|||+|++| .|++.+||++|++||+++...+ .+..||+|+||+.+
T Consensus 328 aG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~g-------------------~~~~~G~G~vd~~~ 388 (395)
T 2z2z_A 328 SGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTG-------------------WDADYGYGVVRAAL 388 (395)
T ss_dssp HHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSSS-------------------SBTTTBTCBCCHHH
T ss_pred HHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCCC-------------------CCCCccCceeCHHH
Confidence 999999999999 9999999999999999875432 24679999999999
Q ss_pred cCCC
Q 003005 706 SLDP 709 (858)
Q Consensus 706 A~~~ 709 (858)
|++.
T Consensus 389 A~~~ 392 (395)
T 2z2z_A 389 AVQA 392 (395)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9863
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=6e-54 Score=495.46 Aligned_cols=337 Identities=21% Similarity=0.276 Sum_probs=260.9
Q ss_pred CceeEEEEEcceeeEEEEEcCHHHHHHHhc-CCCeeEEEeCccccccCCCCCc----------ccC-----CCccccccc
Q 003005 116 EKYLKLYSYHYLINGFSVFVTPQQAEKLSR-RREVANVVSDFSVRTATTHTPQ----------FLG-----LPQGAWIQE 179 (858)
Q Consensus 116 ~~~~~~~~~~~~~ng~~v~~~~~~l~~L~~-~p~V~~v~~~~~~~~~~~~~~~----------~~~-----~~~~~w~~~ 179 (858)
.+.++++.|. .+++|+++++++++++|++ +|+|++|+++..+++....... .|+ .+..+|..
T Consensus 64 ~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~- 141 (471)
T 3t41_A 64 KSLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDD- 141 (471)
T ss_dssp HTCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGG-
T ss_pred CCCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccCcHHHHhc-
Confidence 3578888885 5999999999999999999 9999999999888765432211 122 12235554
Q ss_pred CCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCccCCCC
Q 003005 180 GGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSSQ 259 (858)
Q Consensus 180 ~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~~~~~~ 259 (858)
+++|+||+|||||||||++||+|.++..... ..++....|... ..+...
T Consensus 142 ---~~~G~gv~VaViDtGid~~Hp~~~~~~~~~~-----------------------~~~~~~~~~~~~-----~~~~~~ 190 (471)
T 3t41_A 142 ---LPKHANTKIAIIDTGVMKNHDDLKNNFSTDS-----------------------KNLVPLNGFRGT-----EPEETG 190 (471)
T ss_dssp ---CCSSCCCCEEEEESCCCTTCTTTTTTBCTTC-----------------------EECCCTTCGGGC-----CTTCCC
T ss_pred ---cCCCCCcEEEEEeCCCCCCChhHhcCcccCC-----------------------cccccCCCccCC-----CcccCC
Confidence 6899999999999999999999998654100 001111111111 011112
Q ss_pred CCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q 003005 260 DYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISL 339 (858)
Q Consensus 260 ~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~g~~VIN~ 339 (858)
+...+.|..||||||||||+|+. .+.||||+|+|+.+|+++. ..+..+++++||+|+++++++||||
T Consensus 191 ~~~~~~d~~gHGT~vAgiiaa~g------------~~~GvAp~a~l~~~kv~~~-~~~~~~~i~~ai~~a~~~g~~Vin~ 257 (471)
T 3t41_A 191 DVHDVNDRKGHGTMVSGQTSANG------------KLIGVAPNNKFTMYRVFGS-KKTELLWVSKAIVQAANDGNQVINI 257 (471)
T ss_dssp CTTCCCCSSSHHHHHHHHHHCBS------------SSBCSSTTSCEEEEECCSS-SCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCcCCCCccchhhheeecCC------------ceeEECCCCeEEEEEeccC-CCCcHHHHHHHHHHHHhCCCCEEEe
Confidence 23456789999999999999873 3579999999999999987 5688899999999999999999999
Q ss_pred ccCCCCCCC--CC-------CccCCHHHHHHHHHHhCCCEEEEecCCCCCCCCC------------------CCCCCCce
Q 003005 340 SITPNRRPP--GI-------ATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKS------------------MSSFSPWI 392 (858)
Q Consensus 340 S~G~~~~~~--~~-------~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~------------------~~~~~p~v 392 (858)
|||...... .. ....+.+..+++.+.++|++||+||||+|..... .|+..+++
T Consensus 258 S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~v 337 (471)
T 3t41_A 258 SVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNV 337 (471)
T ss_dssp CCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTE
T ss_pred CCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCe
Confidence 999732100 00 1234678889999999999999999999986532 56777888
Q ss_pred EEEeecccCceeeeEEEeCCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEE
Q 003005 393 FTVGAASHDRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICS 472 (858)
Q Consensus 393 itVgA~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~ 472 (858)
|+|||++.+
T Consensus 338 itVgA~~~~----------------------------------------------------------------------- 346 (471)
T 3t41_A 338 VTVGSTDQK----------------------------------------------------------------------- 346 (471)
T ss_dssp EEEEEECTT-----------------------------------------------------------------------
T ss_pred EEEEeeCCC-----------------------------------------------------------------------
Confidence 888875421
Q ss_pred eccccccCcchHHHHHHHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEe
Q 003005 473 YSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIK 552 (858)
Q Consensus 473 ~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 552 (858)
T Consensus 347 -------------------------------------------------------------------------------- 346 (471)
T 3t41_A 347 -------------------------------------------------------------------------------- 346 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeeEEEecccccccCCCCCccccccccCCCCCCCCCCCcCcCCCcccCCCce----------------------EEeec
Q 003005 553 FGAVACILGGLKANFSNSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNS----------------------IWAAW 610 (858)
Q Consensus 553 ~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~----------------------I~Sa~ 610 (858)
+.++.||++||+. |||+|||++ |+++.
T Consensus 347 -------------------~~~a~fS~~G~~~------------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~ 395 (471)
T 3t41_A 347 -------------------SNLSEFSNFGMNY------------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTA 395 (471)
T ss_dssp -------------------SSBCTTCCBCTTT------------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEEC
T ss_pred -------------------CCCCCccCCCCCC------------CeEEecCCCcccccccccccccccccccCceeEecC
Confidence 2478899999964 399999987 88888
Q ss_pred cCCCCCCccccCccceeecccCchhHHHHHHHHHHHHhCC-CCCHHHHHHHHHccccccccCCCccccccccCCCCCCCC
Q 003005 611 SSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQKFP-SFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQS 689 (858)
Q Consensus 611 ~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P-~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~ 689 (858)
+++.|..++|||||||||||++|||+|++| .++|++||++|++||++...
T Consensus 396 ----------~~~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~------------------- 446 (471)
T 3t41_A 396 ----------NNGRYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN------------------- 446 (471)
T ss_dssp ----------TTSSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC-------------------
T ss_pred ----------CCCCEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC-------------------
Confidence 456899999999999999999999999999 89999999999999987532
Q ss_pred CCCCCccccccccccccCCCC
Q 003005 690 PATPFDMGSGFVNATASLDPG 710 (858)
Q Consensus 690 ~~~~~~~G~G~vd~~~A~~~~ 710 (858)
.++..||+|+||+.+|++..
T Consensus 447 -~~~~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 447 -KPFSRYGHGELDVYKALNVA 466 (471)
T ss_dssp -CCHHHHTTCBBCHHHHTTTT
T ss_pred -CCcCccccChhCHHHHHHHH
Confidence 23468999999999999753
No 7
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=1.3e-55 Score=513.77 Aligned_cols=340 Identities=21% Similarity=0.233 Sum_probs=40.6
Q ss_pred ceeEEEEEcceeeEEEEEcCHHHHHHHhcCCCeeEEEeCccccccCCCCCcccCCCc--------ccccccCCCCCCCCC
Q 003005 117 KYLKLYSYHYLINGFSVFVTPQQAEKLSRRREVANVVSDFSVRTATTHTPQFLGLPQ--------GAWIQEGGYETAGEG 188 (858)
Q Consensus 117 ~~~~~~~~~~~~ng~~v~~~~~~l~~L~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~--------~~w~~~~~~~~~G~G 188 (858)
..++++.|..+|+||+++++++++++|+++|+|++||++..+.... ..|++.. ..|. .+.+|+|
T Consensus 108 ~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~~----~pWgL~~i~~~~~~~~~w~----~~~~G~G 179 (692)
T 2p4e_P 108 LTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQS----IPWNLERITPPRYRADEYQ----PPDGGSL 179 (692)
T ss_dssp CCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC-----------------------------------
T ss_pred ccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccCC----CCcchhhcccccccccccc----cCCCCCC
Confidence 3578899999999999999999999999999999999998875421 1133321 1343 3689999
Q ss_pred cEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCccCCCCCCCCCCCCC
Q 003005 189 VVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSSQDYASPFDGD 268 (858)
Q Consensus 189 v~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~~~~~~~~~~~~d~~ 268 (858)
|+|||||||||++||+|.++... ..|.. +.+. +.......+.|.+
T Consensus 180 V~VaVIDTGId~~HpdL~gr~~~------~~~~~----------------------~~d~-------dg~~~~~~~~D~~ 224 (692)
T 2p4e_P 180 VEVYLLDTSIQSDHREIEGRVMV------TDFEN----------------------VPEE-------DGTRFHRQASKCD 224 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEEEcCCCCCCChhhcCceEe------ccccc----------------------ccCC-------CCCcccCCCCCCC
Confidence 99999999999999999986430 00100 0000 0000013456889
Q ss_pred CCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHHC------CCCEEEEccC
Q 003005 269 GHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQD------GVDIISLSIT 342 (858)
Q Consensus 269 gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~------g~~VIN~S~G 342 (858)
||||||||||+|+. .||||+|+|+++|+++..+.+..+++++||+|++++ +++|||||||
T Consensus 225 GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlG 290 (692)
T 2p4e_P 225 SHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLA 290 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCCCCCCHHHHHHHHHHHHhhhhcccCCceEEEecCC
Confidence 99999999999862 499999999999999875557888999999999986 8999999999
Q ss_pred CCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCC-CCCCCCCceEEEeecccCceeeeEEEeCCceEEEeeec
Q 003005 343 PNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPK-SMSSFSPWIFTVGAASHDRIYTNSIILGNSLTISGVGL 421 (858)
Q Consensus 343 ~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~~~~~ 421 (858)
+.. ...++.+++.+.++|++||+||||+|.+.. ..|+..+++|+|||++.+....
T Consensus 291 g~~--------s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~a---------------- 346 (692)
T 2p4e_P 291 GGY--------SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQPV---------------- 346 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCC--------cHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCcc----------------
Confidence 642 356778888999999999999999998754 3478899999999975331000
Q ss_pred CCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHHHHHHHHhCCCeEEEE
Q 003005 422 APGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVF 501 (858)
Q Consensus 422 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~ 501 (858)
T Consensus 347 -------------------------------------------------------------------------------- 346 (692)
T 2p4e_P 347 -------------------------------------------------------------------------------- 346 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEecccccccCCCCCccccccccC
Q 003005 502 YMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANFSNSAPKIMYYSARG 581 (858)
Q Consensus 502 ~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~G 581 (858)
..-+.||+||
T Consensus 347 ----------------------------------------------------------------------~~ss~fSn~G 356 (692)
T 2p4e_P 347 ----------------------------------------------------------------------TLGTLGTNFG 356 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------------------------------------------ccccccCCCC
Confidence 0012388888
Q ss_pred CCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHHHHHHhCCCCCHHHHHHHH
Q 003005 582 PDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQKFPSFSPSAIASAL 661 (858)
Q Consensus 582 Pt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~lsp~~ik~~L 661 (858)
|.+ ||+|||++|+|+++.. ++.|..++|||||||||||++|||+|++|+|+|+|||++|
T Consensus 357 ~~v-------------DI~APG~~I~St~~~~--------~~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L 415 (692)
T 2p4e_P 357 RCV-------------DLFAPGEDIIGASSDC--------STCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRL 415 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred Cce-------------eEEecCCcEEeeccCC--------CCceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Confidence 744 9999999999998532 2479999999999999999999999999999999999999
Q ss_pred HccccccccCCCccccccccCCCCCCC-CCCCCCcccccc--ccccccCC
Q 003005 662 STSATLYDKNGGPIMAQRAYAKPDENQ-SPATPFDMGSGF--VNATASLD 708 (858)
Q Consensus 662 ~~TA~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~G~G~--vd~~~A~~ 708 (858)
++||.+....+.++........|+.-. .+.....+|+|+ .++..+..
T Consensus 416 ~~tA~~~~~~~~~~p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~~~s 465 (692)
T 2p4e_P 416 IHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHS 465 (692)
T ss_dssp --------------------------------------------------
T ss_pred HHhccccccCCCCCccccCCCCcceeecCCCccccCCCCccccccccccC
Confidence 999986432221110000000111001 111345678888 88877764
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=5.3e-53 Score=495.46 Aligned_cols=338 Identities=23% Similarity=0.307 Sum_probs=253.3
Q ss_pred eeEEEEEcceeeEEEEEcCH----HHHHHHh--cCCCeeEEEeCccccccC----CCC----------------------
Q 003005 118 YLKLYSYHYLINGFSVFVTP----QQAEKLS--RRREVANVVSDFSVRTAT----THT---------------------- 165 (858)
Q Consensus 118 ~~~~~~~~~~~ng~~v~~~~----~~l~~L~--~~p~V~~v~~~~~~~~~~----~~~---------------------- 165 (858)
.++.+++. .+++++++++. +.+++|+ ++|+|++|||++.+++.. ...
T Consensus 53 ~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (671)
T 1r6v_A 53 GKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEEL 131 (671)
T ss_dssp CEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTT
T ss_pred CeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEEecCeEEEeccccccCcccccccccccccccccccccccc
Confidence 46677775 68899999864 3457776 489999999997765431 000
Q ss_pred -Ccc-----cCCCccc-ccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCce
Q 003005 166 -PQF-----LGLPQGA-WIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRK 238 (858)
Q Consensus 166 -~~~-----~~~~~~~-w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~k 238 (858)
... ++++. + |+. ++|+||+|||||||||++||+|.++..
T Consensus 132 ~~~~W~l~~I~~~~-a~w~~-----~tG~gV~VAVIDTGVd~~HpdL~~~~~---------------------------- 177 (671)
T 1r6v_A 132 SNELWGLEAIGVTQ-QLWEE-----ASGTNIIVAVVDTGVDGTHPDLEGQVI---------------------------- 177 (671)
T ss_dssp GGGCHHHHHTTCCH-HHHHH-----CSCTTCEEEEEESCCBTTSGGGTTTBC----------------------------
T ss_pred cccCCchhccCCch-hhhhc-----cCCCCCEEEEEeCCCCCCCccccccEE----------------------------
Confidence 001 22222 3 554 789999999999999999999998643
Q ss_pred eeeeeecchhhhhcCccCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCC----
Q 003005 239 LIGARHFAASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKS---- 314 (858)
Q Consensus 239 v~g~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~---- 314 (858)
.++++..+. ..+ ...+..|.+||||||||||+|..+ + .++.||||+|+|+++|+++..
T Consensus 178 --~g~~~~~~~-----~~p--~~~d~~d~~gHGThVAGiIAa~~n------g---~gv~GVAP~A~I~~vkv~~~~~~~~ 239 (671)
T 1r6v_A 178 --AGYRPAFDE-----ELP--AGTDSSYGGSAGTHVAGTIAAKKD------G---KGIVGVAPGAKIMPIVIFDDPALVG 239 (671)
T ss_dssp --CEEEGGGTE-----EEC--TTCBCCTTCSHHHHHHHHHHCCCS------S---SSCCCSCTTSEEEEEESBCCHHHHC
T ss_pred --ecccccCCC-----cCC--CCCCCccCCCcchhhhhhhhccCC------C---CceEEECCCCEEEEEEeccCccccC
Confidence 001110000 000 012234678999999999999742 1 246799999999999999751
Q ss_pred -CC-CCHHHHHHHHHHHHHCCCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCC-CCCCCCCCc
Q 003005 315 -FG-GFAADVVAAIDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSP-KSMSSFSPW 391 (858)
Q Consensus 315 -~~-~~~~~i~~ai~~a~~~g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~~p~ 391 (858)
.+ .....+++||+||+++|++|||||||+.. +...+.++++.|.++|++||+||||+|.+. ..+|+..++
T Consensus 240 g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~-------~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~ 312 (671)
T 1r6v_A 240 GNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG-------YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPG 312 (671)
T ss_dssp TTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC-------CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTT
T ss_pred CCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC-------CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCC
Confidence 12 34567899999999999999999999742 235788999999999999999999999875 567888999
Q ss_pred eEEEeecccCceeeeEEEeCCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEE
Q 003005 392 IFTVGAASHDRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLIC 471 (858)
Q Consensus 392 vitVgA~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~ 471 (858)
+|+|||++.+..
T Consensus 313 VItVgA~d~~g~-------------------------------------------------------------------- 324 (671)
T 1r6v_A 313 VIQVAALDYYGG-------------------------------------------------------------------- 324 (671)
T ss_dssp CEEEEEEEEETT--------------------------------------------------------------------
T ss_pred eEEEEEEcCCCC--------------------------------------------------------------------
Confidence 999999753210
Q ss_pred EeccccccCcchHHHHHHHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEE
Q 003005 472 SYSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKII 551 (858)
Q Consensus 472 ~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~ 551 (858)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeeeEEEecccccccCCCCCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCC--------ccccCc
Q 003005 552 KFGAVACILGGLKANFSNSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDS--------VEFQGE 623 (858)
Q Consensus 552 ~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~--------~~~~~~ 623 (858)
...++.||++||.. ||+|||++|+|+++...... ....++
T Consensus 325 -------------------~~~~a~fSn~G~~v-------------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~ 372 (671)
T 1r6v_A 325 -------------------TFRVAGFSSRSDGV-------------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGG 372 (671)
T ss_dssp -------------------EEEECSSSCCCTTE-------------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSC
T ss_pred -------------------ceeeccccCCCCCe-------------eEEecCCCEEeecCCCCccccccccccccccCCC
Confidence 01268899999975 99999999999987542210 011345
Q ss_pred cceeecccCchhHHHHHHHHHHHHhCCCCCHHHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccc
Q 003005 624 SFAMMSGTSMAAPHIAGLAALIKQKFPSFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNA 703 (858)
Q Consensus 624 ~y~~~sGTSMAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~ 703 (858)
.|..++|||||||||||++|||+|++|+|+|+|||++|++||+++...+. +..+|+|+||+
T Consensus 373 ~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g~-------------------d~~~G~G~vna 433 (671)
T 1r6v_A 373 TYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNGW-------------------DHDTGYGLVKL 433 (671)
T ss_dssp CEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSSC-------------------BTTTBTCBCCH
T ss_pred ceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCCC-------------------CCCcccceeCH
Confidence 89999999999999999999999999999999999999999998754432 45799999999
Q ss_pred cccCCCCeeee
Q 003005 704 TASLDPGLVFD 714 (858)
Q Consensus 704 ~~A~~~~~v~~ 714 (858)
.+|++..+..+
T Consensus 434 ~~Al~~~l~~~ 444 (671)
T 1r6v_A 434 DAALQGPLPTQ 444 (671)
T ss_dssp HHHHHCCCCSS
T ss_pred HHHhhhhcCCC
Confidence 99998765443
No 9
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=7.7e-52 Score=472.50 Aligned_cols=389 Identities=20% Similarity=0.289 Sum_probs=271.6
Q ss_pred cCCCcccccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchh
Q 003005 169 LGLPQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAAS 248 (858)
Q Consensus 169 ~~~~~~~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~ 248 (858)
++++. +|.. +|+||+|||||||||++||+|.++.. ..+++..
T Consensus 11 i~~~~-~w~~------~g~gv~VaViDtGvd~~Hp~l~~~~~------------------------------~~~~~~~- 52 (441)
T 1y9z_A 11 VGATV-LSDS------QAGNRTICIIDSGYDRSHNDLNANNV------------------------------TGTNNSG- 52 (441)
T ss_dssp TTCSS-SCCT------TGGGCEEEEEESCCCTTSTTTTTSEE------------------------------EECCCTT-
T ss_pred cChhh-hhhc------CCCCcEEEEEcCCCCCCChhHhcCcc------------------------------cCcccCC-
Confidence 44444 6764 47799999999999999999987532 1111110
Q ss_pred hhhcCccCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcc--eeeeeehhcCCCCCCHHHHHHHH
Q 003005 249 AITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRS--HIAVYKALYKSFGGFAADVVAAI 326 (858)
Q Consensus 249 ~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A--~l~~~kv~~~~~~~~~~~i~~ai 326 (858)
..++..+.|..||||||||||+|..+. .++.||||+| +|+.+|+++....+..+++++||
T Consensus 53 ---------~~~~~~~~d~~gHGT~vAgiia~~~~~---------~g~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai 114 (441)
T 1y9z_A 53 ---------TGNWYQPGNNNAHGTHVAGTIAAIANN---------EGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAI 114 (441)
T ss_dssp ---------SCCTTCCCSSCCHHHHHHHHHHCCCSS---------SBCCCSSCSSCSEEEEEECEETTEECCSSCHHHHH
T ss_pred ---------CCCCCCCCCCCCcHHHHHHHHhcccCC---------CCceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHH
Confidence 011234568899999999999997531 2368999995 89999999874447778999999
Q ss_pred HHHHHC-CCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCceEEEeecccCceee
Q 003005 327 DQAAQD-GVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAASHDRIYT 405 (858)
Q Consensus 327 ~~a~~~-g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~ 405 (858)
+||+++ |++|||||||.... ...+.++++++.++|++||+||||+|.....+|+..+++|+|||++.+....
T Consensus 115 ~~a~~~~g~~Vin~S~G~~~~-------~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~ 187 (441)
T 1y9z_A 115 DTCVNSGGANVVTMSLGGSGS-------TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHA 187 (441)
T ss_dssp HHHHHTTCCSEEEECCCBSCC-------BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBC
T ss_pred HHHHHhcCCcEEEeCCCCCCC-------CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCC
Confidence 999999 99999999997532 2467889999999999999999999998888899999999999998876543
Q ss_pred eEEEeCCceEEE-----------------------eeecCCCC----CceeE--EEEcccccCCCCcccCCCCccccCCC
Q 003005 406 NSIILGNSLTIS-----------------------GVGLAPGT----DKMYT--LISALHALNNNTTTTDDMYVGECQDS 456 (858)
Q Consensus 406 ~~~~~~~g~~~~-----------------------~~~~~~~~----~~~~~--l~~~~~~~~~~~~~~~~~~~~~c~~~ 456 (858)
.+..++....+. +.++.... ...++ +.+........ .......|...
T Consensus 188 ~~S~~g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~----~~~~~~~C~~~ 263 (441)
T 1y9z_A 188 AFSQYTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINAS----ATGALAECTVN 263 (441)
T ss_dssp TTSCCCTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCE----EEEEEEEEEEE
T ss_pred ccccCCCceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCccccccccccc----cccchhccccc
Confidence 333232222111 11110000 00000 00111100000 00112346532
Q ss_pred -CCCccccccceEEEEEeccccccCcchHHHHHHHHHhCCCeEEEEEECCCCcCcc-----cCCCCCCCCeEEecChhhH
Q 003005 457 -SNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQ-----LNPTPMKMPGIIIPSPDDS 530 (858)
Q Consensus 457 -~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~-----~~~~~~~ip~~~i~~~~~~ 530 (858)
..+...+++|||++|.|+.+. .....+..+..+++++|+.|+|++|+....+.. .....+.+|.+.+ +..++
T Consensus 264 ~~~~~~~~~~gkivl~~rg~~~-~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v-~~~~g 341 (441)
T 1y9z_A 264 GTSFSCGNMANKICLVERVGNQ-GSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSV-DRATG 341 (441)
T ss_dssp TTEEECCCCTTEEEEEECCSCS-SSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEE-CHHHH
T ss_pred cccccCCCccccEEEEeccccC-cccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEE-eHHHH
Confidence 245677899999999985321 112356788999999999999999986544321 1223467888776 56777
Q ss_pred HHHHHHHhcccccccccceEEeeeeeEEEecccccccCCCCCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeec
Q 003005 531 KILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANFSNSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAW 610 (858)
Q Consensus 531 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~ 610 (858)
..|++++.+ .+. +++.
T Consensus 342 ~~l~~~~~~----------------------------------------------------------~~t------~~~~ 357 (441)
T 1y9z_A 342 LALKAKLGQ----------------------------------------------------------STT------VSNQ 357 (441)
T ss_dssp HHHHTTTTS----------------------------------------------------------EEE------EEEE
T ss_pred HHHHHHhcC----------------------------------------------------------Ccc------cccc
Confidence 777654321 000 0111
Q ss_pred cCCCCCCccccCccceeecccCchhHHHHHHHHHHHHhCCCCCHHHHHHHHHccccccccCCCccccccccCCCCCCCCC
Q 003005 611 SSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQKFPSFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSP 690 (858)
Q Consensus 611 ~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~ 690 (858)
.++.|..+||||||||||||++|||+|+||+|+|++||++||+||++++..+.
T Consensus 358 ----------~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g~----------------- 410 (441)
T 1y9z_A 358 ----------GNQDYEYYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAGR----------------- 410 (441)
T ss_dssp ----------EEESEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSSC-----------------
T ss_pred ----------cCCCceeecccccCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCCC-----------------
Confidence 34589999999999999999999999999999999999999999998765432
Q ss_pred CCCCccccccccccccCCCCeeeeCCcchhhhhccccCCC
Q 003005 691 ATPFDMGSGFVNATASLDPGLVFDASYNDYMSFLCGINGS 730 (858)
Q Consensus 691 ~~~~~~G~G~vd~~~A~~~~~v~~~~~~~~~~~~~~~~~~ 730 (858)
+.+||+|+||+.+|+ ||+.|+|..+.+
T Consensus 411 --~~~~G~G~vn~~~A~-----------~~~~~lc~~~~~ 437 (441)
T 1y9z_A 411 --DNQTGYGMINAVAAK-----------AYLDESCTGPTD 437 (441)
T ss_dssp --BTTTBTCBCCHHHHH-----------HHHHHCTTCC--
T ss_pred --cccccccccCHHHHH-----------HHHHhhhcCCCC
Confidence 457999999999996 788999988753
No 10
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=4.3e-51 Score=437.96 Aligned_cols=257 Identities=32% Similarity=0.447 Sum_probs=208.8
Q ss_pred cccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCc
Q 003005 175 AWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGI 254 (858)
Q Consensus 175 ~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~ 254 (858)
+|+. +..|+||+|||||||||++||+|.++ ++..++|.+.
T Consensus 23 aw~~----~~g~~gv~VaViDtGvd~~hp~l~~~------------------------------~~~~~~~~~~------ 62 (280)
T 1dbi_A 23 AWDV----TKGSSGQEIAVIDTGVDYTHPDLDGK------------------------------VIKGYDFVDN------ 62 (280)
T ss_dssp HTTT----CCCCTTCEEEEEESCCCTTSTTTTTT------------------------------EEEEEETTTT------
T ss_pred HHhh----cCCCCCCEEEEEeCCcCCCChhhccC------------------------------cccceeccCC------
Confidence 6665 55667999999999999999999864 3334455432
Q ss_pred cCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHHCCC
Q 003005 255 FNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGV 334 (858)
Q Consensus 255 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~g~ 334 (858)
...+.|..+|||||||||+|..++. .++.||||+|+|+.+|+++....+..++++++|+|++++|+
T Consensus 63 ------~~~~~d~~gHGT~vAgiia~~~~~~--------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~g~ 128 (280)
T 1dbi_A 63 ------DYDPMDLNNHGTHVAGIAAAETNNA--------TGIAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGA 128 (280)
T ss_dssp ------BSCCCCSSSHHHHHHHHHHCCCSSS--------SSCCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTC
T ss_pred ------CCCCCCCCCcHHHHHHHHhCcCCCC--------CcceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCC
Confidence 1345688999999999999975332 23579999999999999987555888999999999999999
Q ss_pred CEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCceEEEeecccCceeeeEEEeCCce
Q 003005 335 DIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAASHDRIYTNSIILGNSL 414 (858)
Q Consensus 335 ~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~ 414 (858)
+|||||||.... ...++.+++.+.++|++||+||||+|.....+|+..+++|+|||++.+
T Consensus 129 ~Vin~S~G~~~~-------~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------- 188 (280)
T 1dbi_A 129 EVINLSLGCDCH-------TTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY------------- 188 (280)
T ss_dssp SEEEECCSSCCC-------CHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT-------------
T ss_pred CEEEeCCCCCCC-------CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC-------------
Confidence 999999997532 357888999999999999999999998877888999999999986422
Q ss_pred EEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHHHHHHHHhC
Q 003005 415 TISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNL 494 (858)
Q Consensus 415 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~ 494 (858)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEecccccccCCCCCcc
Q 003005 495 SAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANFSNSAPKI 574 (858)
Q Consensus 495 Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 574 (858)
+.+
T Consensus 189 -----------------------------------------------------------------------------~~~ 191 (280)
T 1dbi_A 189 -----------------------------------------------------------------------------DRL 191 (280)
T ss_dssp -----------------------------------------------------------------------------SCB
T ss_pred -----------------------------------------------------------------------------CCc
Confidence 236
Q ss_pred ccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHHHHHHhCCCCCH
Q 003005 575 MYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQKFPSFSP 654 (858)
Q Consensus 575 a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~lsp 654 (858)
+.||++||.. ||+|||++|+++. .++.|..++|||||||||||++|||++ |.+++
T Consensus 192 ~~~S~~G~~~-------------dv~ApG~~i~s~~----------~~~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~ 246 (280)
T 1dbi_A 192 ASFSNYGTWV-------------DVVAPGVDIVSTI----------TGNRYAYMSGTSMASPHVAGLAALLAS--QGRNN 246 (280)
T ss_dssp CTTBCCSTTC-------------CEEEECSSEEEEE----------TTTEEEEECSHHHHHHHHHHHHHHHHH--TTCCH
T ss_pred CCCCCCCCCc-------------eEEEecCCeEeec----------CCCCEEEccCHHHHHHHHHHHHHHHHC--CCCCH
Confidence 8899999865 8999999999998 456899999999999999999999987 89999
Q ss_pred HHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccccccCC
Q 003005 655 SAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNATASLD 708 (858)
Q Consensus 655 ~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~ 708 (858)
+|||++|++||+++... ...||+|+||+.+|++
T Consensus 247 ~~v~~~L~~ta~~~~~~---------------------~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 247 IEIRQAIEQTADKISGT---------------------GTYFKYGRINSYNAVT 279 (280)
T ss_dssp HHHHHHHHHTSBCCTTB---------------------TTTBSSEECCHHHHHT
T ss_pred HHHHHHHHHhCccCCCC---------------------CCcccCCEECHHHHhc
Confidence 99999999999987532 2368999999999985
No 11
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=6.5e-53 Score=467.89 Aligned_cols=305 Identities=22% Similarity=0.226 Sum_probs=194.9
Q ss_pred cCCCcccccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchh
Q 003005 169 LGLPQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAAS 248 (858)
Q Consensus 169 ~~~~~~~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~ 248 (858)
.++.+ +|.. +..|+||+|||||||||++||+|++... .+....|...++.... .......+..+
T Consensus 18 pG~~~-~w~~----~~g~~~V~VaViDtGiD~~Hpdf~g~~~---~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 81 (357)
T 4h6x_A 18 PGLAD-LHNQ----TLGDPQITIVIIDGDPDYTLSCFEGAEV---SKVFPYWHEPAEPITP--------EDYAAFQSIRD 81 (357)
T ss_dssp TTHHH-HHHH----CSCCTTSEEEEEESCCCTTSGGGTTCEE---EECCCTTSCCCCCCCH--------HHHHHHHHHHH
T ss_pred cCHHH-HHHh----cCCCCCCEEEEEcCCCCCCChhHcCCCc---ccccccccccccccCc--------ccccccccccC
Confidence 34544 8887 5678999999999999999999998654 3334455543321100 00000000000
Q ss_pred h------hhcCccCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCC-----C
Q 003005 249 A------ITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFG-----G 317 (858)
Q Consensus 249 ~------~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~-----~ 317 (858)
. ..........+...+.|.+||||||||||+|+.+ +++.||||+|+|+.+|++....+ .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~----------~g~~GvAp~a~l~~~k~~~~~~~~~~~~~ 151 (357)
T 4h6x_A 82 QGLKGKEKEEALEAVIPDTKDRIVLNDHACHVTSTIVGQEH----------SPVFGIAPNCRVINMPQDAVIRGNYDDVM 151 (357)
T ss_dssp HTCCSHHHHHHHHHHCTTTHHHHHHHHHHHHHHHHHHCCTT----------SSCCCSCTTSEEEEEECTTC---------
T ss_pred ccccccccccccccccCCCCCCcCCCCcHHHHHHHHhccCC----------CCceEeeccceEEeeeecccCCCCccccc
Confidence 0 0000000111223345678999999999999753 23579999999999999754221 2
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCceEEEee
Q 003005 318 FAADVVAAIDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGA 397 (858)
Q Consensus 318 ~~~~i~~ai~~a~~~g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA 397 (858)
...+++++|+|++++|++|||||||..... ....+.+..+++.+.++|++||+||||+|.....+|+..+++|+|||
T Consensus 152 ~~~~~~~ai~~a~~~g~~Vin~S~G~~~~~---~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga 228 (357)
T 4h6x_A 152 SPLNLARAIDLALELGANIIHCAFCRPTQT---SEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGA 228 (357)
T ss_dssp -CHHHHHHHHHHHHTTCSEEEEC--------------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEE
T ss_pred cHHHHHHHHHHHHHcCCCEEeeccccCCcc---ccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEE
Confidence 335688999999999999999999975433 33457889999999999999999999999988888999999999999
Q ss_pred cccCceeeeEEEeCCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEecccc
Q 003005 398 ASHDRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRF 477 (858)
Q Consensus 398 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~ 477 (858)
++.+
T Consensus 229 ~~~~---------------------------------------------------------------------------- 232 (357)
T 4h6x_A 229 AKVD---------------------------------------------------------------------------- 232 (357)
T ss_dssp ECTT----------------------------------------------------------------------------
T ss_pred eccC----------------------------------------------------------------------------
Confidence 6422
Q ss_pred ccCcchHHHHHHHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeE
Q 003005 478 VLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVA 557 (858)
Q Consensus 478 ~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 557 (858)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecccccccCCCCCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHH
Q 003005 558 CILGGLKANFSNSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPH 637 (858)
Q Consensus 558 ~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~ 637 (858)
+.++.||+||+. +.||||+|||.+|+|+.+ .++.|..++||||||||
T Consensus 233 --------------~~~~~fSn~G~~----------~~~~di~APG~~i~s~~~---------~~~~~~~~sGTS~AaP~ 279 (357)
T 4h6x_A 233 --------------GTPCHFSNWGGN----------NTKEGILAPGEEILGAQP---------CTEEPVRLTGTSMAAPV 279 (357)
T ss_dssp --------------SSBCTTCC---C----------TTTTEEEEECSSEEECCT---------TCSCCEEECSHHHHHHH
T ss_pred --------------CcccccccCCCC----------CCccceeecCCCeEeccC---------CCCcccccCcHHHHHHH
Confidence 247889999975 368999999999999985 23467889999999999
Q ss_pred HHHHHHHHHH----hCCCCCHHHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccccccCC
Q 003005 638 IAGLAALIKQ----KFPSFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNATASLD 708 (858)
Q Consensus 638 VAG~aALl~q----~~P~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~ 708 (858)
|||++|||++ ++|.|+++|||++|++||++++... ...+.+||+|+||+.+|++
T Consensus 280 vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~-----------------~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 280 MTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEV-----------------VEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC-------------------------------CTTCBCCHHHHHH
T ss_pred HHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCCC-----------------CCCcccceeEEecHHHHHH
Confidence 9999999995 4668999999999999999875322 1235679999999999986
No 12
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=1.2e-50 Score=434.55 Aligned_cols=261 Identities=31% Similarity=0.487 Sum_probs=219.0
Q ss_pred cCCCcccccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchh
Q 003005 169 LGLPQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAAS 248 (858)
Q Consensus 169 ~~~~~~~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~ 248 (858)
++++. +|+. .+|+||+|||||||||++||+|.++ ++..++|.++
T Consensus 18 i~~~~-aw~~-----~~G~gv~VaViDtGvd~~h~~l~~~------------------------------~~~~~~~~~~ 61 (279)
T 1thm_A 18 IQAPQ-AWDI-----AEGSGAKIAIVDTGVQSNHPDLAGK------------------------------VVGGWDFVDN 61 (279)
T ss_dssp TTHHH-HHTT-----CCCTTCEEEEEESCCCTTCTTTTTT------------------------------EEEEEETTTT
T ss_pred CChHH-HHhc-----CCCCCCEEEEEccCCCCCCcchhcC------------------------------ccccccccCC
Confidence 34444 7876 4799999999999999999999964 3334455432
Q ss_pred hhhcCccCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHH
Q 003005 249 AITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQ 328 (858)
Q Consensus 249 ~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~ 328 (858)
...+.|..+|||||||||+|..+++ .++.||||+|+|+.+|+++....+..++++++|+|
T Consensus 62 ------------~~~~~d~~gHGT~vAgiia~~~~n~--------~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~ 121 (279)
T 1thm_A 62 ------------DSTPQNGNGHGTHCAGIAAAVTNNS--------TGIAGTAPKASILAVRVLDNSGSGTWTAVANGITY 121 (279)
T ss_dssp ------------BSCCCCSSSHHHHHHHHHHCCCSSS--------SSCCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHH
T ss_pred ------------CCCCCCCCCcHHHHHHHHhCccCCC--------CccEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHH
Confidence 1345688999999999999975432 23579999999999999987556788999999999
Q ss_pred HHHCCCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCceEEEeecccCceeeeEE
Q 003005 329 AAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAASHDRIYTNSI 408 (858)
Q Consensus 329 a~~~g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~ 408 (858)
|+++|++|||||||.... ...+.++++.+.++|++||+||||+|.....+|+..+++|+|||++.+
T Consensus 122 a~~~g~~Vin~S~G~~~~-------~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------- 187 (279)
T 1thm_A 122 AADQGAKVISLSLGGTVG-------NSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN------- 187 (279)
T ss_dssp HHHTTCSEEEECCCBSSC-------CHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT-------
T ss_pred HHHCCCCEEEEecCCCCC-------CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC-------
Confidence 999999999999997532 357888999999999999999999999888889999999999986422
Q ss_pred EeCCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHHHH
Q 003005 409 ILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAF 488 (858)
Q Consensus 409 ~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~ 488 (858)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEecccccccC
Q 003005 489 ETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANFS 568 (858)
Q Consensus 489 ~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 568 (858)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHHHHHHh
Q 003005 569 NSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQK 648 (858)
Q Consensus 569 ~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~ 648 (858)
+.++.||++||.. ||+|||++|++++ +++.|..++|||||||||||++||| +
T Consensus 188 ---~~~~~fS~~G~~~-------------dv~APG~~i~s~~----------~~~~~~~~sGTS~AaP~VaG~aAll--~ 239 (279)
T 1thm_A 188 ---DNKSSFSTYGSWV-------------DVAAPGSSIYSTY----------PTSTYASLSGTSMATPHVAGVAGLL--A 239 (279)
T ss_dssp ---SCBCTTCCCCTTC-------------CEEEECSSEEEEE----------TTTEEEEECSHHHHHHHHHHHHHHH--H
T ss_pred ---CCcCCcCCCCCce-------------EEEEcCCCeEEEe----------CCCCEEEcccHHHHHHHHHHHHHHH--H
Confidence 2367899999865 8999999999998 4568999999999999999999999 5
Q ss_pred CCCCCHHHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccccccCC
Q 003005 649 FPSFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNATASLD 708 (858)
Q Consensus 649 ~P~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~ 708 (858)
+|.+++++||++|++||+++...+ ..||+|+||+.+|++
T Consensus 240 ~p~~t~~~v~~~L~~ta~~~~~~~---------------------~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 240 SQGRSASNIRAAIENTADKISGTG---------------------TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp TTTCCHHHHHHHHHHTCBCCTTBT---------------------TTBSSEECCHHHHHH
T ss_pred CCCcCHHHHHHHHHHhCccCCCCC---------------------ccccCCeeCHHHHhc
Confidence 899999999999999999875432 368999999999974
No 13
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=1e-50 Score=432.19 Aligned_cols=254 Identities=33% Similarity=0.494 Sum_probs=214.9
Q ss_pred cccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCc
Q 003005 175 AWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGI 254 (858)
Q Consensus 175 ~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~ 254 (858)
+|.. +++|+||+|||||||| .+||+|+. ...++|..+
T Consensus 16 a~~~----g~~G~gv~VaViDtGi-~~h~~l~~--------------------------------~~~~~~~~~------ 52 (269)
T 1gci_A 16 AHNR----GLTGSGVKVAVLDTGI-STHPDLNI--------------------------------RGGASFVPG------ 52 (269)
T ss_dssp HHHT----TCSCTTCEEEEEESCC-CCCTTCCE--------------------------------EEEEECSTT------
T ss_pred HHhc----CCCCCCCEEEEECCCC-CCCHhhcc--------------------------------cCCcccCCC------
Confidence 6765 7899999999999999 89999942 112233221
Q ss_pred cCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHHCCC
Q 003005 255 FNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGV 334 (858)
Q Consensus 255 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~g~ 334 (858)
...+.|..+|||||||||+|..+. ..+.||||+|+|+.+|+++....+..++++++|+|++++++
T Consensus 53 ------~~~~~d~~gHGT~vAgiia~~~~~---------~~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~ 117 (269)
T 1gci_A 53 ------EPSTQDGNGHGTHVAGTIAALNNS---------IGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGM 117 (269)
T ss_dssp ------CCSCSCSSSHHHHHHHHHHCCCSS---------SBCCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTC
T ss_pred ------CCCCCCCCCChHHHHHHHhcCcCC---------CCcEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCC
Confidence 123567899999999999987321 23579999999999999987556788999999999999999
Q ss_pred CEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCceEEEeecccCceeeeEEEeCCce
Q 003005 335 DIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAASHDRIYTNSIILGNSL 414 (858)
Q Consensus 335 ~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~ 414 (858)
+|||||||.... ...++.+++.+.++|++||+||||+|.....+|+..+++|+|||++.+
T Consensus 118 ~Vin~S~G~~~~-------~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~------------- 177 (269)
T 1gci_A 118 HVANLSLGSPSP-------SATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN------------- 177 (269)
T ss_dssp SEEEECCCBSSC-------CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT-------------
T ss_pred eEEEeCCCCCCC-------CHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecCC-------------
Confidence 999999997532 357888999999999999999999999888889999999999986421
Q ss_pred EEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHHHHHHHHhC
Q 003005 415 TISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNL 494 (858)
Q Consensus 415 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~ 494 (858)
T Consensus 178 -------------------------------------------------------------------------------- 177 (269)
T 1gci_A 178 -------------------------------------------------------------------------------- 177 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEecccccccCCCCCcc
Q 003005 495 SAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANFSNSAPKI 574 (858)
Q Consensus 495 Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 574 (858)
+.+
T Consensus 178 -----------------------------------------------------------------------------~~~ 180 (269)
T 1gci_A 178 -----------------------------------------------------------------------------NNR 180 (269)
T ss_dssp -----------------------------------------------------------------------------SCB
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 236
Q ss_pred ccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHHHHHHhCCCCCH
Q 003005 575 MYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQKFPSFSP 654 (858)
Q Consensus 575 a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~lsp 654 (858)
+.||++||.. ||+|||++|++++ +++.|..++|||||||||||++|||+|++|+|++
T Consensus 181 ~~~S~~G~~~-------------di~APG~~i~s~~----------~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~ 237 (269)
T 1gci_A 181 ASFSQYGAGL-------------DIVAPGVNVQSTY----------PGSTYASLNGTSMATPHVAGAAALVKQKNPSWSN 237 (269)
T ss_dssp CTTCCCSTTE-------------EEEEECSSEEEEE----------TTTEEEEECSHHHHHHHHHHHHHHHHHHCTTCCH
T ss_pred CCCCCCCCCc-------------ceEecCCCeEeec----------CCCCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 7899999865 9999999999998 4568999999999999999999999999999999
Q ss_pred HHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccccccCC
Q 003005 655 SAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNATASLD 708 (858)
Q Consensus 655 ~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~ 708 (858)
+|||++|++||+++. ++..||+|+||+.+|++
T Consensus 238 ~~v~~~L~~tA~~~g----------------------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 238 VQIRNHLKNTATSLG----------------------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp HHHHHHHHHTSBCCS----------------------CHHHHTTCBCCHHHHTC
T ss_pred HHHHHHHHHhCccCC----------------------CCCCcccCccCHHHHcC
Confidence 999999999999763 13479999999999985
No 14
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=7.9e-51 Score=434.83 Aligned_cols=255 Identities=32% Similarity=0.510 Sum_probs=212.9
Q ss_pred cccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCc
Q 003005 175 AWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGI 254 (858)
Q Consensus 175 ~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~ 254 (858)
+|.. +++|+||+|||||||||++||+|+. ...++|..+
T Consensus 16 ~~~~----g~~G~gv~VaViDtGid~~h~~l~~--------------------------------~~g~~~~~~------ 53 (274)
T 1r0r_E 16 VQAQ----GFKGANVKVAVLDTGIQASHPDLNV--------------------------------VGGASFVAG------ 53 (274)
T ss_dssp HHHH----TCSCTTCEEEEEESCCCTTCTTCCE--------------------------------EEEEECSTT------
T ss_pred HHhc----CCCCCCCEEEEEcCCCCCCCHhHcC--------------------------------CCCccccCC------
Confidence 6765 7899999999999999999999942 112233221
Q ss_pred cCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHHCCC
Q 003005 255 FNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGV 334 (858)
Q Consensus 255 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~g~ 334 (858)
...+.|..+|||||||||+|..+. ..+.||||+|+|+.+|+++....+..++++++|+|++++++
T Consensus 54 ------~~~~~d~~gHGT~vAgiia~~~~~---------~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~ 118 (274)
T 1r0r_E 54 ------EAYNTDGNGHGTHVAGTVAALDNT---------TGVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGM 118 (274)
T ss_dssp ------CCTTCCSSSHHHHHHHHHHCCSSS---------SBCCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTC
T ss_pred ------CCCCCCCCCCHHHHHHHHHccCCC---------CceEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCC
Confidence 122457889999999999987321 23579999999999999987555788899999999999999
Q ss_pred CEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCC----CCCCCCCCceEEEeecccCceeeeEEEe
Q 003005 335 DIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSP----KSMSSFSPWIFTVGAASHDRIYTNSIIL 410 (858)
Q Consensus 335 ~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~vitVgA~~~~~~~~~~~~~ 410 (858)
+|||||||.... ...+..+++++.++|++||+||||+|... ..+|+..+++|+|||++.+
T Consensus 119 ~Vin~S~G~~~~-------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~--------- 182 (274)
T 1r0r_E 119 DVINMSLGGASG-------STAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSN--------- 182 (274)
T ss_dssp SEEEECEEBSSC-------CHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTT---------
T ss_pred CEEEeCCCCCCC-------cHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecCC---------
Confidence 999999997532 35788899999999999999999999763 4567888999999986421
Q ss_pred CCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHHHHHH
Q 003005 411 GNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFET 490 (858)
Q Consensus 411 ~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~ 490 (858)
T Consensus 183 -------------------------------------------------------------------------------- 182 (274)
T 1r0r_E 183 -------------------------------------------------------------------------------- 182 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEecccccccCCC
Q 003005 491 AKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANFSNS 570 (858)
Q Consensus 491 ~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 570 (858)
T Consensus 183 -------------------------------------------------------------------------------- 182 (274)
T 1r0r_E 183 -------------------------------------------------------------------------------- 182 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHHHHHHhCC
Q 003005 571 APKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQKFP 650 (858)
Q Consensus 571 ~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P 650 (858)
+.++.||++||.. ||+|||.+|++++ +++.|..++|||||||||||++|||+|++|
T Consensus 183 -~~~~~~S~~G~~~-------------di~APG~~i~s~~----------~~~~~~~~sGTS~AaP~vaG~aAll~~~~p 238 (274)
T 1r0r_E 183 -SNRASFSSVGAEL-------------EVMAPGAGVYSTY----------PTNTYATLNGTSMASPHVAGAAALILSKHP 238 (274)
T ss_dssp -SCBCTTCCCSTTE-------------EEEEECSSEEEEE----------TTTEEEEECSHHHHHHHHHHHHHHHHHHST
T ss_pred -CCcCccCCCCCCc-------------eEEeCCCCeEeec----------CCCCEEEeccHHHHHHHHHHHHHHHHHHCC
Confidence 2367899999854 9999999999998 456899999999999999999999999999
Q ss_pred CCCHHHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccccccCC
Q 003005 651 SFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNATASLD 708 (858)
Q Consensus 651 ~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~ 708 (858)
+|+++|||++|++||+++. ++..||+|+||+.+|++
T Consensus 239 ~lt~~~v~~~L~~tA~~~g----------------------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 239 NLSASQVRNRLSSTATYLG----------------------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp TCCHHHHHHHHHHTCBCCS----------------------CHHHHTTCBCCHHHHTC
T ss_pred CCCHHHHHHHHHHhCcccC----------------------CCCCcccCccCHHHHhC
Confidence 9999999999999999763 13479999999999985
No 15
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=2e-50 Score=433.00 Aligned_cols=257 Identities=30% Similarity=0.457 Sum_probs=213.8
Q ss_pred cccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCc
Q 003005 175 AWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGI 254 (858)
Q Consensus 175 ~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~ 254 (858)
+|.. +++|+||+|||||||||++||+|+.. .+++|..+
T Consensus 16 ~~~~----g~~G~gv~VaViDtGid~~h~~l~~~--------------------------------~g~~~~~~------ 53 (281)
T 1to2_E 16 LHSQ----GYTGSNVKVAVIDSGIDSSHPDLKVA--------------------------------GGASMVPS------ 53 (281)
T ss_dssp HHHH----TCSCTTCEEEEEESCCCTTCTTCCEE--------------------------------EEEECCTT------
T ss_pred HHhc----CCCCCCCEEEEEcCCCCCCCHHHcCc--------------------------------CCccccCC------
Confidence 6765 78999999999999999999999521 11222211
Q ss_pred cCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHHCCC
Q 003005 255 FNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGV 334 (858)
Q Consensus 255 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~g~ 334 (858)
+.....|..+|||||||||+|..+. ..+.||||+|+|+.+|+++....+..++++++|+|++++++
T Consensus 54 -----~~~~~~d~~gHGT~vAgiia~~~~~---------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~ 119 (281)
T 1to2_E 54 -----ETNPFQDNNSHGTHVAGTVAALNNS---------IGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNM 119 (281)
T ss_dssp -----CCCTTCCSSSHHHHHHHHHHCCSSS---------SSBCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTC
T ss_pred -----CCCCCCCCCCcHHHHHHHHhccCCC---------CcceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCC
Confidence 1112357889999999999997421 23579999999999999987555788999999999999999
Q ss_pred CEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCC----CCCCCCCCceEEEeecccCceeeeEEEe
Q 003005 335 DIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSP----KSMSSFSPWIFTVGAASHDRIYTNSIIL 410 (858)
Q Consensus 335 ~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~vitVgA~~~~~~~~~~~~~ 410 (858)
+|||||||.... ...+..+++.+.++|++||+||||+|... ..+|+..|++|+|||++.+
T Consensus 120 ~Vin~S~G~~~~-------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~--------- 183 (281)
T 1to2_E 120 DVINMSLGGPSG-------SAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSS--------- 183 (281)
T ss_dssp SEEEECEEBSCC-------CHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTT---------
T ss_pred cEEEECCcCCCC-------CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecCC---------
Confidence 999999997532 35788899999999999999999999862 4567888999999986421
Q ss_pred CCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHHHHHH
Q 003005 411 GNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFET 490 (858)
Q Consensus 411 ~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~ 490 (858)
T Consensus 184 -------------------------------------------------------------------------------- 183 (281)
T 1to2_E 184 -------------------------------------------------------------------------------- 183 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEecccccccCCC
Q 003005 491 AKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANFSNS 570 (858)
Q Consensus 491 ~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 570 (858)
T Consensus 184 -------------------------------------------------------------------------------- 183 (281)
T 1to2_E 184 -------------------------------------------------------------------------------- 183 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHHHHHHhCC
Q 003005 571 APKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQKFP 650 (858)
Q Consensus 571 ~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P 650 (858)
+.++.||++||.. ||+|||.+|+++. +++.|..++|||||||||||++|||+|++|
T Consensus 184 -~~~~~fS~~G~~~-------------di~APG~~i~s~~----------~~~~~~~~sGTS~AaP~vaG~aAll~~~~p 239 (281)
T 1to2_E 184 -NQRASFSSVGPEL-------------DVMAPGVSIQSTL----------PGNKYGAYNGTSMASPHVAGAAALILSKHP 239 (281)
T ss_dssp -SCBCTTCCCSTTC-------------CEEEECSSEEEEE----------TTTEEEEECBHHHHHHHHHHHHHHHHHHST
T ss_pred -CCcCCcCCCCCCc-------------eEEecCCCeEeec----------CCCCEEecCcHHHHHHHHHHHHHHHHHhCC
Confidence 2367899999865 8999999999998 456899999999999999999999999999
Q ss_pred CCCHHHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccccccCCC
Q 003005 651 SFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNATASLDP 709 (858)
Q Consensus 651 ~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 709 (858)
+|+++|||++|++||+++. +++.||+|+||+.+|++.
T Consensus 240 ~lt~~~v~~~L~~tA~~~g----------------------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 240 NWTNTQVRSSLENTTTKLG----------------------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp TCCHHHHHHHHHTTCBCCS----------------------CHHHHTTCBCCHHHHTSS
T ss_pred CCCHHHHHHHHHhhCcccC----------------------CCCCcccceecHHHHhhh
Confidence 9999999999999999763 134799999999999975
No 16
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=5.7e-51 Score=438.61 Aligned_cols=265 Identities=23% Similarity=0.297 Sum_probs=211.2
Q ss_pred CCC-CCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCccCCCCCCC
Q 003005 184 TAG-EGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSSQDYA 262 (858)
Q Consensus 184 ~~G-~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~~~~~~~~~ 262 (858)
++| +||+|||||||||++||+|.++.. ..+++... ....
T Consensus 4 l~G~~gV~VaViDtGid~~Hpdl~g~~~------------------------------~~~~~~~~----------~~~~ 43 (282)
T 3zxy_A 4 LKGDHNIRVAILDGPVDIAHPCFQGADL------------------------------TVLPTLAP----------TAAR 43 (282)
T ss_dssp CCCCTTSEEEEEESCCCTTSGGGTTCEE------------------------------EECCCSSC----------CCCC
T ss_pred CcCCCCCEEEEEcCCCCCCChhHCCCee------------------------------ecCcCCCC----------CCCC
Confidence 678 699999999999999999997543 00111100 0111
Q ss_pred CCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCC-CCHHHHHHHHHHHHHCCCCEEEEcc
Q 003005 263 SPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFG-GFAADVVAAIDQAAQDGVDIISLSI 341 (858)
Q Consensus 263 ~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~-~~~~~i~~ai~~a~~~g~~VIN~S~ 341 (858)
...|.+||||||||||+|+.+. .+.||||+|+|+.+|++.+..+ ....+++++|+||++++++||||||
T Consensus 44 ~d~~~~gHGT~VAGiiag~~~~----------~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~ 113 (282)
T 3zxy_A 44 SDGFMSAHGTHVASIIFGQPET----------SVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISG 113 (282)
T ss_dssp TTCHHHHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCCcccceeehhhccCCc----------eeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccC
Confidence 2234578999999999997532 3579999999999999865333 6778899999999999999999999
Q ss_pred CCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCceEEEeecccCceeeeEEEeCCceEEEeeec
Q 003005 342 TPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAASHDRIYTNSIILGNSLTISGVGL 421 (858)
Q Consensus 342 G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~~~~~ 421 (858)
|..... ......++.+++.+.++|+++|+||||+|......|+..+++|+|||++.+
T Consensus 114 G~~~~~---~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~-------------------- 170 (282)
T 3zxy_A 114 GELTDF---GEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDH-------------------- 170 (282)
T ss_dssp CEEESS---SCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECTT--------------------
T ss_pred cccccc---ccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcCC--------------------
Confidence 964322 223457888999999999999999999999888888999999999986422
Q ss_pred CCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHHHHHHHHhCCCeEEEE
Q 003005 422 APGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVF 501 (858)
Q Consensus 422 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~ 501 (858)
T Consensus 171 -------------------------------------------------------------------------------- 170 (282)
T 3zxy_A 171 -------------------------------------------------------------------------------- 170 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEecccccccCCCCCccccccccC
Q 003005 502 YMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANFSNSAPKIMYYSARG 581 (858)
Q Consensus 502 ~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~G 581 (858)
+.++.||+||
T Consensus 171 ----------------------------------------------------------------------~~~~~~S~~~ 180 (282)
T 3zxy_A 171 ----------------------------------------------------------------------GHPLDFSNWG 180 (282)
T ss_dssp ----------------------------------------------------------------------SCBCSSSCCC
T ss_pred ----------------------------------------------------------------------CccccccCCC
Confidence 2367789998
Q ss_pred CCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHHHHHHhC----CCCCHHHH
Q 003005 582 PDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQKF----PSFSPSAI 657 (858)
Q Consensus 582 Pt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~----P~lsp~~i 657 (858)
+. +.||||+|||.+|+++. +++.|..++|||||||||||++|||+|++ |.++|+||
T Consensus 181 ~~----------~~~~di~ApG~~i~s~~----------~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~v 240 (282)
T 3zxy_A 181 ST----------YEQQGILAPGEDILGAK----------PGGGTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKV 240 (282)
T ss_dssp HH----------HHHHEEEEECSSEEEEC----------TTSCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred CC----------ccccceeccCcceeeec----------CCCceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHH
Confidence 75 46889999999999998 56689999999999999999999999875 78999999
Q ss_pred HHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccccccCC
Q 003005 658 ASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNATASLD 708 (858)
Q Consensus 658 k~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~ 708 (858)
|++|++||++++... +.....+|+|+||+.+|++
T Consensus 241 k~~L~~tA~~~~~~~-----------------~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 241 RQLLLQSALPCDDDA-----------------PEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp HHHHHHHCBCC------------------------CGGGTTCBCCHHHHHH
T ss_pred HHHHHhhCeeCCCCC-----------------CCccCceeeeEeCHHHHHH
Confidence 999999998764321 2334579999999999985
No 17
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=2.5e-50 Score=441.44 Aligned_cols=263 Identities=29% Similarity=0.407 Sum_probs=212.4
Q ss_pred cccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCc
Q 003005 175 AWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGI 254 (858)
Q Consensus 175 ~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~ 254 (858)
+|.. +++|+||+|||||||||++||+|.++ +..+++|..+..
T Consensus 33 aw~~----~~~G~gv~VaViDtGid~~Hp~l~~~------------------------------~~~~~~~~~~~~---- 74 (327)
T 2x8j_A 33 VWRA----SAKGAGQIIGVIDTGCQVDHPDLAER------------------------------IIGGVNLTTDYG---- 74 (327)
T ss_dssp HHHH----HGGGTTCEEEEEESCCCTTCTTTGGG------------------------------EEEEEECSSGGG----
T ss_pred HHhc----CCCCCCCEEEEEcCCCCCCChhHhhc------------------------------ccCCccccCCCC----
Confidence 7776 68999999999999999999999863 333444443210
Q ss_pred cCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHH---
Q 003005 255 FNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQ--- 331 (858)
Q Consensus 255 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~--- 331 (858)
.+...+.|..||||||||||+|..+ + .++.||||+|+|+.+|+++....+..+++++||+||++
T Consensus 75 ----~~~~~~~d~~gHGT~VAgiia~~~~-~--------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~ 141 (327)
T 2x8j_A 75 ----GDETNFSDNNGHGTHVAGTVAAAET-G--------SGVVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRG 141 (327)
T ss_dssp ----GCTTCCCCSSSHHHHHHHHHHCCCC-S--------SBCCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCCC
T ss_pred ----CCCCCCCCCCCchHHHHHHHhccCC-C--------CCcEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhcc
Confidence 0112346889999999999999742 1 23579999999999999987555788999999999999
Q ss_pred ---CCCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCC-----CCCCCCCCCceEEEeecccCce
Q 003005 332 ---DGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPS-----PKSMSSFSPWIFTVGAASHDRI 403 (858)
Q Consensus 332 ---~g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~-----~~~~~~~~p~vitVgA~~~~~~ 403 (858)
.+++|||||||.... ...+..+++.+.++|++||+||||+|.. ...+|+..+++|+|||++.+
T Consensus 142 ~~~~~~~Vin~S~G~~~~-------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~~-- 212 (327)
T 2x8j_A 142 PKGEQMRIITMSLGGPTD-------SEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD-- 212 (327)
T ss_dssp TTSCCCSEEEECEEBSCC-------CHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECTT--
T ss_pred cccCCceEEEECCCcCCC-------CHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECCC--
Confidence 899999999997532 3578889999999999999999999975 24567888999999986422
Q ss_pred eeeEEEeCCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcch
Q 003005 404 YTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLST 483 (858)
Q Consensus 404 ~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~ 483 (858)
T Consensus 213 -------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 213 -------------------------------------------------------------------------------- 212 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEeccc
Q 003005 484 IKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGL 563 (858)
Q Consensus 484 ~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 563 (858)
T Consensus 213 -------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 213 -------------------------------------------------------------------------------- 212 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHH
Q 003005 564 KANFSNSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAA 643 (858)
Q Consensus 564 ~~~~~~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aA 643 (858)
+.++.||++||.+ ||+|||++|++++ .++.|..++|||||||||||++|
T Consensus 213 --------~~~~~fS~~G~~~-------------di~APG~~i~s~~----------~~~~~~~~sGTS~AaP~VaG~aA 261 (327)
T 2x8j_A 213 --------LRLSDFTNTNEEI-------------DIVAPGVGIKSTY----------LDSGYAELSGTAMAAPHVAGALA 261 (327)
T ss_dssp --------CCBSCC---CCCC-------------SEEEECSSEEEEC----------STTCEEEEESGGGTHHHHHHHHH
T ss_pred --------CCCCCccCCCCCc-------------eEecCcCceEeec----------CCCCEEeecCHHHHHHHHHHHHH
Confidence 2368899999855 9999999999998 45689999999999999999999
Q ss_pred HHHHh-----CCCCCHHHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccccccCCC
Q 003005 644 LIKQK-----FPSFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNATASLDP 709 (858)
Q Consensus 644 Ll~q~-----~P~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 709 (858)
||+|+ +|.+++.+||++|++||+++.. ++..+|+|+||+.+|++.
T Consensus 262 ll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g~---------------------~~~~~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 262 LIINLAEDAFKRSLSETEIYAQLVRRATPIGF---------------------TAQAEGNGFLTLDLVERI 311 (327)
T ss_dssp HHHHHHHHHHTSCCCHHHHHHHHHTTEECCSS---------------------CHHHHTTCEECTTHHHHH
T ss_pred HHHHhhhhhcCCCCCHHHHHHHHHHhCccCCC---------------------CCCceeeeEECHHHHHHh
Confidence 99999 9999999999999999997632 235799999999999863
No 18
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=1.6e-50 Score=440.87 Aligned_cols=277 Identities=23% Similarity=0.321 Sum_probs=220.0
Q ss_pred ccCCCcccccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecch
Q 003005 168 FLGLPQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAA 247 (858)
Q Consensus 168 ~~~~~~~~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~ 247 (858)
+.|+++ +|+. ...++||+|||||||||++||+|.++.. ....++..
T Consensus 7 i~G~~~-aW~~----~~G~~gV~VaViDtGid~~Hpdl~g~~~-----------------------------~~~~~~~~ 52 (306)
T 4h6w_A 7 IPGLKK-LWSE----TRGDPKICVAVLDGIVDQNHPCFIGADL-----------------------------TRLPSLVS 52 (306)
T ss_dssp CTTHHH-HHHH----CSCCTTCEEEEESSCCCTTSGGGTTCEE-----------------------------EECC----
T ss_pred CcCHHH-HHhh----hCCCCCCEEEEEcCCCCCCChhHcCCcc-----------------------------cCCCcccC
Confidence 345655 8987 3445899999999999999999997543 11112221
Q ss_pred hhhhcCccCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCC-CCCHHHHHHHH
Q 003005 248 SAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSF-GGFAADVVAAI 326 (858)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~-~~~~~~i~~ai 326 (858)
+ +.....|.++|||||||||+|+.+ +.+.||||+|+|+.+|++.+.. .....+++++|
T Consensus 53 ~-----------~~~~~~d~~gHGThVAGiiag~~~----------~~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai 111 (306)
T 4h6w_A 53 G-----------EANANGSMSTHGTHVASIIFGQHD----------SPVTGIAPQCRGLIVPVFADESLKLSQLDLSRAI 111 (306)
T ss_dssp -----------------CCCCHHHHHHHHHHHCCTT----------SSSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHH
T ss_pred C-----------CCCCCCCCCCchHHHHHHHHcccc----------CCcceeccccccceeeccccccccchHHHHHHHH
Confidence 1 112234678999999999999753 2457999999999999986533 36778899999
Q ss_pred HHHHHCCCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCCCceEEEeecccCceeee
Q 003005 327 DQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAASHDRIYTN 406 (858)
Q Consensus 327 ~~a~~~g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~ 406 (858)
+||++++++|||+|||..... ......++.+++.+.++|+++|+||||+|.....+|+..+++|+|||++..
T Consensus 112 ~~a~~~g~~vi~~s~g~~~~~---~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~----- 183 (306)
T 4h6w_A 112 EQAVNNGANIINVSAGQLTDA---GEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ----- 183 (306)
T ss_dssp HHHHHTTCSEEEECCCEEESS---SCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT-----
T ss_pred HHhhcccceeeeccccccccC---CCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC-----
Confidence 999999999999999964322 223457888999999999999999999999888888999999999986422
Q ss_pred EEEeCCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHH
Q 003005 407 SIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQ 486 (858)
Q Consensus 407 ~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~ 486 (858)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEecccccc
Q 003005 487 AFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKAN 566 (858)
Q Consensus 487 ~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 566 (858)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHHHHH
Q 003005 567 FSNSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIK 646 (858)
Q Consensus 567 ~~~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~ 646 (858)
+.++.||++|+. ..||||+|||.+|+|+. +++.|..++|||||||||||++|||+
T Consensus 184 -----~~~~~~s~~g~~----------~~~~di~APG~~i~s~~----------~~~~~~~~sGTS~AaP~VaG~~All~ 238 (306)
T 4h6w_A 184 -----GKPVDFSNWGDA----------YQKQGILAPGKDILGAK----------PNGGTIRLSGTSFATPIVSGVAALLL 238 (306)
T ss_dssp -----SCBCSSSCBCHH----------HHHHEEEEECSSEEEEC----------TTSCEEEECSHHHHHHHHHHHHHHHH
T ss_pred -----CCccccccccCC----------cCcceeecCCcCccccc----------CCCceeccCCCcchhHHHHHHHHHHH
Confidence 235678899874 46899999999999998 45689999999999999999999998
Q ss_pred H----hCCCCCHHHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccccccCCC
Q 003005 647 Q----KFPSFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNATASLDP 709 (858)
Q Consensus 647 q----~~P~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 709 (858)
+ ++|.|+|+|||++|++||+++...+. .....||+|+||+.+|++.
T Consensus 239 s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~~-----------------~~~~~~G~G~ln~~~Av~~ 288 (306)
T 4h6w_A 239 SLQIKRGEKPDPQKVKNALLASATPCNPKDT-----------------DDQSRCLMGKLNILDAIEH 288 (306)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHTCBCCCTTTC-----------------SCGGGGTTCBCCHHHHHHH
T ss_pred HHHHhhCCCCCHHHHHHHHHhhCccCCCCCC-----------------CCCCCcceeecCHHHHHHH
Confidence 6 46999999999999999998765432 2234799999999999963
No 19
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=4.1e-49 Score=430.19 Aligned_cols=285 Identities=30% Similarity=0.463 Sum_probs=221.2
Q ss_pred cccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCc
Q 003005 175 AWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGI 254 (858)
Q Consensus 175 ~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~ 254 (858)
+|.. +++|+||+|||||||||++||+|.++. ...++|....
T Consensus 18 ~w~~----~~~G~gv~VaViDtGvd~~H~~l~~~~------------------------------~~~~~~~~~~----- 58 (310)
T 2ixt_A 18 TLTS----TTGGSGINIAVLDTGVNTSHPDLVNNV------------------------------EQCKDFTGAT----- 58 (310)
T ss_dssp TCCC----CCCCTTCEEEEEESCCCTTCTTTTTTE------------------------------EEEEESSSSS-----
T ss_pred hhhc----cCCCCCcEEEEEecCCCCCCHHHhhcc------------------------------cccccccCCC-----
Confidence 6665 789999999999999999999999742 2233333210
Q ss_pred cCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHHCCC
Q 003005 255 FNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGV 334 (858)
Q Consensus 255 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~g~ 334 (858)
........|..||||||||||+|.... +...+.||||+|+|+.+|++.....+..++++++|+|++++++
T Consensus 59 ---~~~~~~~~d~~gHGT~vAgiia~~~~~-------n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~ 128 (310)
T 2ixt_A 59 ---TPINNSCTDRNGHGTHVAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQAT 128 (310)
T ss_dssp ---SCEETCCCCSSSHHHHHHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCCCCCHHHHHHHHhccCCC-------CCCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhhh
Confidence 001123457889999999999987421 1134679999999999999987555788999999999999887
Q ss_pred -----CEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCC--CCCCCCCCCceEEEeecccCceeeeE
Q 003005 335 -----DIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPS--PKSMSSFSPWIFTVGAASHDRIYTNS 407 (858)
Q Consensus 335 -----~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~--~~~~~~~~p~vitVgA~~~~~~~~~~ 407 (858)
+|||||||.... ...+..+++.+.++|++||+||||+|.. ...+|+..+++|+|||++....
T Consensus 129 ~~~~~~Vin~S~G~~~~-------~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~---- 197 (310)
T 2ixt_A 129 ATGTKTIISMSLGSSAN-------NSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ---- 197 (310)
T ss_dssp HHTCCEEEEECCCBSSC-------CHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE----
T ss_pred ccCCCeEEEEcCCCCCC-------CHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc----
Confidence 999999997532 3578889999999999999999999976 4567888999999999652100
Q ss_pred EEeCCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHHH
Q 003005 408 IILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQA 487 (858)
Q Consensus 408 ~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~ 487 (858)
.|
T Consensus 198 ---------------------------------------------------------~g--------------------- 199 (310)
T 2ixt_A 198 ---------------------------------------------------------NG--------------------- 199 (310)
T ss_dssp ---------------------------------------------------------TT---------------------
T ss_pred ---------------------------------------------------------CC---------------------
Confidence 00
Q ss_pred HHHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEeccccccc
Q 003005 488 FETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANF 567 (858)
Q Consensus 488 ~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 567 (858)
T Consensus 200 -------------------------------------------------------------------------------- 199 (310)
T 2ixt_A 200 -------------------------------------------------------------------------------- 199 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHHHHHH
Q 003005 568 SNSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQ 647 (858)
Q Consensus 568 ~~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q 647 (858)
...++.||++||...... -..++.||||+|||.+|++++ .++.|..++|||||||||||++|||+|
T Consensus 200 ---~~~~~~~S~~G~~~~~g~-~~~~~~~~di~ApG~~i~s~~----------~~~~~~~~sGTS~AaP~vaG~aAll~~ 265 (310)
T 2ixt_A 200 ---TYRVADYSSRGYISTAGD-YVIQEGDIEISAPGSSVYSTW----------YNGGYNTISGTSMATPHVSGLAAKIWA 265 (310)
T ss_dssp ---EEEECTTSCCCCTTTTTS-SSCCTTCCCEEEECSSEEEEC----------TTSSEEEECSHHHHHHHHHHHHHHHHH
T ss_pred ---CeeeccccCCCCccCCcc-ccccCCCeeEECCCCCEeeec----------CCCCEEeeccHHHHHHHHHHHHHHHHH
Confidence 003678999999542100 001345999999999999998 456899999999999999999999999
Q ss_pred hCCCCCHHHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccc
Q 003005 648 KFPSFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNA 703 (858)
Q Consensus 648 ~~P~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~ 703 (858)
++|+|+++|||++|++||++++..+. ....+.++..+|||++|+
T Consensus 266 ~~p~lt~~~v~~~L~~tA~~~~~~~~------------~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 266 ENPSLSNTQLRSNLQERAKSVDIKGG------------YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp HSTTCCHHHHHHHHHHHHHTSCCCBS------------TTCCSSSBTTTBTCBCCC
T ss_pred hCCCCCHHHHHHHHHhhCcccCCCCC------------cccccCCccccccceeec
Confidence 99999999999999999998764332 013455678999999996
No 20
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=1.7e-49 Score=434.37 Aligned_cols=268 Identities=26% Similarity=0.428 Sum_probs=217.8
Q ss_pred cCCCcccccccCCCCCCCC--CcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecc
Q 003005 169 LGLPQGAWIQEGGYETAGE--GVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFA 246 (858)
Q Consensus 169 ~~~~~~~w~~~~~~~~~G~--Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~ 246 (858)
++++. +|.. + +|+ ||+|||||||||++||+|.++. ...++|.
T Consensus 15 i~~~~-aw~~----~-~G~~~gv~VaViDtGid~~Hp~l~~~~------------------------------~~~~~~~ 58 (320)
T 2z30_A 15 VKAPS-VWSI----T-DGSVSVIQVAVLDTGVDYDHPDLAANI------------------------------AWCVSTL 58 (320)
T ss_dssp TTCGG-GTTT----C-CSCCTTCEEEEEESCBCTTCTTTGGGE------------------------------EEEEECG
T ss_pred cChHH-HHHh----c-CCCcCCeEEEEECCCCCCCChhHhccc------------------------------ccCcccc
Confidence 44444 7775 3 899 9999999999999999999742 2333343
Q ss_pred hhhhhcCccCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHH
Q 003005 247 ASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAI 326 (858)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai 326 (858)
.+.. . .+.....|..||||||||||+|..+ + .++.||||+|+|+.+|+++....+..++++++|
T Consensus 59 ~~~~-----~--~~~~~~~d~~gHGT~vAgiia~~~n-~--------~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai 122 (320)
T 2z30_A 59 RGKV-----S--TKLRDCADQNGHGTHVIGTIAALNN-D--------IGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGI 122 (320)
T ss_dssp GGCC-----B--CCHHHHBCSSSHHHHHHHHHHCCSS-S--------BSCCCSSTTCEEEEEECSCTTSEEEHHHHHHHH
T ss_pred CCcc-----C--CCCCCCCCCCCCHHHHHHHHHcccC-C--------CceEeeCCCCEEEEEEeeCCCCCccHHHHHHHH
Confidence 3210 0 0001235788999999999998732 1 235799999999999999875557889999999
Q ss_pred HHHHHC--------------------CCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC
Q 003005 327 DQAAQD--------------------GVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKSMS 386 (858)
Q Consensus 327 ~~a~~~--------------------g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~ 386 (858)
+||+++ +++|||||||.... ...+..+++++.++|++||+||||+|.....+|
T Consensus 123 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~-------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~P 195 (320)
T 2z30_A 123 EQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD-------DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYP 195 (320)
T ss_dssp HHHHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSCC-------CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBT
T ss_pred HHHHhCcccccccccccccccccccCCceEEEecCCCCCC-------CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCc
Confidence 999987 99999999997542 357888899999999999999999999888889
Q ss_pred CCCCceEEEeecccCceeeeEEEeCCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccc
Q 003005 387 SFSPWIFTVGAASHDRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQG 466 (858)
Q Consensus 387 ~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~G 466 (858)
+..|++|+|||++.+
T Consensus 196 a~~~~vi~Vga~~~~----------------------------------------------------------------- 210 (320)
T 2z30_A 196 AAYPEVIAVGAIDSN----------------------------------------------------------------- 210 (320)
T ss_dssp TTSTTEEEEEEECTT-----------------------------------------------------------------
T ss_pred ccCCCeEEEEeeCCC-----------------------------------------------------------------
Confidence 999999999996422
Q ss_pred eEEEEEeccccccCcchHHHHHHHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccc
Q 003005 467 NLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEV 546 (858)
Q Consensus 467 kivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~ 546 (858)
T Consensus 211 -------------------------------------------------------------------------------- 210 (320)
T 2z30_A 211 -------------------------------------------------------------------------------- 210 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceEEeeeeeEEEecccccccCCCCCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccce
Q 003005 547 TKKIIKFGAVACILGGLKANFSNSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFA 626 (858)
Q Consensus 547 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~ 626 (858)
+.++.||++|| +|+|||.+|++++ +++.|.
T Consensus 211 -------------------------~~~~~~S~~g~---------------~v~APG~~i~s~~----------~~~~~~ 240 (320)
T 2z30_A 211 -------------------------DNIASFSNRQP---------------EVSAPGVDILSTY----------PDDSYE 240 (320)
T ss_dssp -------------------------SCBCTTSCSSC---------------SEEEECSSEEEEE----------TTTEEE
T ss_pred -------------------------CCcCcccCCCC---------------CEEeCCCCeEEec----------cCCCeE
Confidence 23678999986 6799999999998 456899
Q ss_pred eecccCchhHHHHHHHHHHHHhC-------------CCCCHHHHHHHHHccccccccCCCccccccccCCCCCCCCCCCC
Q 003005 627 MMSGTSMAAPHIAGLAALIKQKF-------------PSFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATP 693 (858)
Q Consensus 627 ~~sGTSMAaP~VAG~aALl~q~~-------------P~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 693 (858)
.++|||||||||||++|||+|++ |+|++++||++|++||+++...+ .+
T Consensus 241 ~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~ta~~~~~~g-------------------~~ 301 (320)
T 2z30_A 241 TLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTG-------------------WD 301 (320)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHHHHSBCCSSSS-------------------SB
T ss_pred eccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHHHhhCccCCCCC-------------------CC
Confidence 99999999999999999999999 99999999999999999875433 24
Q ss_pred CccccccccccccCCC
Q 003005 694 FDMGSGFVNATASLDP 709 (858)
Q Consensus 694 ~~~G~G~vd~~~A~~~ 709 (858)
..||+|+||+.+|++.
T Consensus 302 ~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 302 ADYGYGVVRAALAVQA 317 (320)
T ss_dssp TTTBTCBCCHHHHHHH
T ss_pred CCcCCceeCHHHHHHH
Confidence 5799999999999863
No 21
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=1.8e-48 Score=444.36 Aligned_cols=295 Identities=27% Similarity=0.369 Sum_probs=225.4
Q ss_pred ccCCCcccccccCCCCCCCCCcEEEEeccCcCC------CCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeee
Q 003005 168 FLGLPQGAWIQEGGYETAGEGVVIGFIDTGIDP------THPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIG 241 (858)
Q Consensus 168 ~~~~~~~~w~~~~~~~~~G~Gv~VaVIDtGid~------~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g 241 (858)
.++++. +|... +++|+||+|||||||||. .||+|.++ +..
T Consensus 7 ~i~~~~-~~~~~---g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~------------------------------i~~ 52 (434)
T 1wmd_A 7 IVKADV-AQSSY---GLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK------------------------------ITA 52 (434)
T ss_dssp HTTHHH-HHHHH---CCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC------------------------------EEE
T ss_pred hhCchh-hhhcc---CCCCcccEEEEEecCcCCCCCCcccCcccCCC------------------------------Eee
Confidence 455554 77632 689999999999999999 79999864 223
Q ss_pred eeecchhhhhcCccCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCC--CH
Q 003005 242 ARHFAASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGG--FA 319 (858)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~--~~ 319 (858)
.++|.+. ..+.|..||||||||||+|+.. .+.||||+|+|+.+|+++..... ..
T Consensus 53 ~~~~~~~-------------~~~~d~~gHGT~VAgiiag~g~-----------~~~GvAp~a~l~~~~v~~~~g~~~~~~ 108 (434)
T 1wmd_A 53 LYALGRT-------------NNANDTNGHGTHVAGSVLGNGS-----------TNKGMAPQANLVFQSIMDSGGGLGGLP 108 (434)
T ss_dssp EEETTTT-------------TCCCCSSSHHHHHHHHHHCCSS-----------SSCCSSTTSEEEEEECCCTTSSCTTSC
T ss_pred eccccCC-------------CCCCCCCCcHHHHHHHHHcCCC-----------CceeeCCCCEEEEEEeecCCCcccccc
Confidence 3344321 3456789999999999998631 24699999999999999763322 45
Q ss_pred HHHHHHHHHHHHCCCCEEEEccCCCCCCCCCCccCCHHHHHHHHH-HhCCCEEEEecCCCCCCC--CCCCCCCCceEEEe
Q 003005 320 ADVVAAIDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSA-AKAGIFVVQAAGNTGPSP--KSMSSFSPWIFTVG 396 (858)
Q Consensus 320 ~~i~~ai~~a~~~g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~g~~~--~~~~~~~p~vitVg 396 (858)
+++.++|+|++++|++|||||||..... .......+++.+ .++|++||+||||+|... ...|+.++++|+||
T Consensus 109 ~~~~~ai~~a~~~g~~Vin~S~G~~~~~-----~~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVg 183 (434)
T 1wmd_A 109 SNLQTLFSQAYSAGARIHTNSWGAAVNG-----AYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVG 183 (434)
T ss_dssp SSHHHHHHHHHHTTCSEEEECCCBCCTT-----CCCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEE
T ss_pred HHHHHHHHHHHhcCCeEEEecCCCCcCC-----cCCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEe
Confidence 6799999999999999999999986421 124556666655 689999999999999864 45678899999999
Q ss_pred ecccCceeeeEEEeCCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccc
Q 003005 397 AASHDRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIR 476 (858)
Q Consensus 397 A~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~ 476 (858)
|++..+...
T Consensus 184 a~~~~~~~~----------------------------------------------------------------------- 192 (434)
T 1wmd_A 184 ATENLRPSF----------------------------------------------------------------------- 192 (434)
T ss_dssp EECCSCGGG-----------------------------------------------------------------------
T ss_pred cccccCccc-----------------------------------------------------------------------
Confidence 976431100
Q ss_pred cccCcchHHHHHHHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeee
Q 003005 477 FVLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAV 556 (858)
Q Consensus 477 ~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 556 (858)
+.
T Consensus 193 ---~~--------------------------------------------------------------------------- 194 (434)
T 1wmd_A 193 ---GS--------------------------------------------------------------------------- 194 (434)
T ss_dssp ---CG---------------------------------------------------------------------------
T ss_pred ---Cc---------------------------------------------------------------------------
Confidence 00
Q ss_pred EEEecccccccCCCCCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCc--cccCccceeecccCch
Q 003005 557 ACILGGLKANFSNSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSV--EFQGESFAMMSGTSMA 634 (858)
Q Consensus 557 ~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~--~~~~~~y~~~sGTSMA 634 (858)
+....+.++.||++||+.+ +++||||+|||++|+++.+....... ...++.|..++|||||
T Consensus 195 ----------~~~~~~~~a~fS~~G~~~~-------g~~kpdi~ApG~~i~s~~~~~~~~~~~~~~~~~~~~~~sGTS~A 257 (434)
T 1wmd_A 195 ----------YADNINHVAQFSSRGPTKD-------GRIKPDVMAPGTFILSARSSLAPDSSFWANHDSKYAYMGGTSMA 257 (434)
T ss_dssp ----------GGSCTTSBCTTSCCCCCTT-------SCCCCCEEEECSSEEEECCTTCCGGGSSEEEETTEEEECSHHHH
T ss_pred ----------ccCCCCccccccCCCCCCC-------CCCCceEEcCCCCeEecCCCCCCCcccccCCCCceEeecchhHH
Confidence 0011246899999999987 89999999999999999864321100 0124689999999999
Q ss_pred hHHHHHHHHHHHHhCCCC-----CHHHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccccccCCC
Q 003005 635 APHIAGLAALIKQKFPSF-----SPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNATASLDP 709 (858)
Q Consensus 635 aP~VAG~aALl~q~~P~l-----sp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 709 (858)
||||||++|||+|++|++ ++++||++|++||+++.. ..+++.||||++|+.+|++.
T Consensus 258 aP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~-------------------~~~~~~~G~G~vd~~~a~~~ 318 (434)
T 1wmd_A 258 TPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGL-------------------GYPNGNQGWGRVTLDKSLNV 318 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSS-------------------CSSCTTTTTCBCCHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCC-------------------CCCCccCCcCeEeHHHhccc
Confidence 999999999999999875 899999999999987532 13467899999999999975
Q ss_pred C
Q 003005 710 G 710 (858)
Q Consensus 710 ~ 710 (858)
.
T Consensus 319 ~ 319 (434)
T 1wmd_A 319 A 319 (434)
T ss_dssp E
T ss_pred c
Confidence 4
No 22
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=1.2e-48 Score=433.30 Aligned_cols=273 Identities=18% Similarity=0.164 Sum_probs=216.0
Q ss_pred cCCCcccccccCCCCCCCC--CcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecc
Q 003005 169 LGLPQGAWIQEGGYETAGE--GVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFA 246 (858)
Q Consensus 169 ~~~~~~~w~~~~~~~~~G~--Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~ 246 (858)
++++. +|.. ++|+ ||+||||||||| +||+|.++. ...++|.
T Consensus 30 i~~~~-aw~~-----~~G~~~gv~VaViDsGid-~Hp~l~~~~------------------------------~~~~~~~ 72 (347)
T 2iy9_A 30 IGLTE-TTMS-----LTDKNTPVVVSVVDSGVA-FIGGLSDSE------------------------------FAKFSFT 72 (347)
T ss_dssp HTCCH-HHHH-----TSCTTSCCEEEEEESCCC-CCGGGTTCE------------------------------EEEEECB
T ss_pred CChHH-HHHH-----hcCCCCCCEEEEEcCCCc-CChhhhcCc------------------------------ccCCccc
Confidence 44444 7876 6899 999999999999 999998742 2333443
Q ss_pred hhhhhcCccCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHH
Q 003005 247 ASAITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAI 326 (858)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai 326 (858)
.+. ...+...+.|..||||||||||+|+. ++.||||+|+|+.+|+++..... ++++||
T Consensus 73 ~~~-------~~~~~~~~~d~~gHGT~vAgiia~~~------------g~~GvAp~a~l~~~~v~~~~~~~---~~~~ai 130 (347)
T 2iy9_A 73 QDG-------SPFPVKKSEALYIHGTAMASLIASRY------------GIYGVYPHALISSRRVIPDGVQD---SWIRAI 130 (347)
T ss_dssp TTC-------CSSCCSSSHHHHHHHHHHHHHHHCSS------------SSCCSSTTCEEEEEECCSSBCTT---HHHHHH
T ss_pred CCC-------CCCCCCCCCCCCCcHHHHHHHHhccc------------CCcccCCCCEEEEEEEecCCCHH---HHHHHH
Confidence 220 00011234567899999999999871 24799999999999999763322 999999
Q ss_pred HHHHHC------CCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCC-------CCCCCCCCC---
Q 003005 327 DQAAQD------GVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPS-------PKSMSSFSP--- 390 (858)
Q Consensus 327 ~~a~~~------g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~-------~~~~~~~~p--- 390 (858)
+||+++ +++|||||||..... .....+..+++.+.++|++||+||||+|.. ...+|+..+
T Consensus 131 ~~a~~~~~~~~~~~~Vin~S~G~~~~~----~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~ 206 (347)
T 2iy9_A 131 ESIMSNVFLAPGEEKIINISGGQKGVA----SASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVS 206 (347)
T ss_dssp HHHHTCTTSCTTEEEEEEESSCBCCC-----CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCS
T ss_pred HHHHhhhhcccCCceEEEeccccCCCC----CcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCcccc
Confidence 999999 999999999975321 234678899999999999999999999985 456778888
Q ss_pred -------ceEEEeeccc--CceeeeEEEeCCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCcc
Q 003005 391 -------WIFTVGAASH--DRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQ 461 (858)
Q Consensus 391 -------~vitVgA~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 461 (858)
++|+|||++. +...
T Consensus 207 ~~~~~~~~vi~Vga~~~~~~g~~--------------------------------------------------------- 229 (347)
T 2iy9_A 207 SVNKKQDPVIRVAALAQYRKGET--------------------------------------------------------- 229 (347)
T ss_dssp HHHHHTCCEEEEEEECCCCTTSC---------------------------------------------------------
T ss_pred ccccccCCEEEEEEcccCCCCce---------------------------------------------------------
Confidence 9999999764 1100
Q ss_pred ccccceEEEEEeccccccCcchHHHHHHHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhccc
Q 003005 462 DLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSL 541 (858)
Q Consensus 462 ~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~ 541 (858)
T Consensus 230 -------------------------------------------------------------------------------- 229 (347)
T 2iy9_A 230 -------------------------------------------------------------------------------- 229 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccceEEeeeeeEEEecccccccCCCCCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCcccc
Q 003005 542 ERDEVTKKIIKFGAVACILGGLKANFSNSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQ 621 (858)
Q Consensus 542 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~ 621 (858)
....+.++.||++||+ ||||+|||++|+++. +
T Consensus 230 --------------------------~~~~~~~~~fS~~G~~------------~~di~APG~~i~s~~----------~ 261 (347)
T 2iy9_A 230 --------------------------PVLHGGGITGSRFGNN------------WVDIAAPGQNITFLR----------P 261 (347)
T ss_dssp --------------------------CCBCCCSSSCBCBCTT------------TCSEEEECSSEEEEC----------T
T ss_pred --------------------------ecccCCCCCCCCCCCC------------CCEEEeCCCCeEeec----------C
Confidence 0001236789999983 459999999999998 4
Q ss_pred CccceeecccCchhHHHHHHHHHHHHhCCCCCHHHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccc
Q 003005 622 GESFAMMSGTSMAAPHIAGLAALIKQKFPSFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFV 701 (858)
Q Consensus 622 ~~~y~~~sGTSMAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~v 701 (858)
++.|..++|||||||||||++|||+|++|+|+++|||++|++||+++...+ +..+|+|+|
T Consensus 262 ~~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~--------------------~~~~G~G~l 321 (347)
T 2iy9_A 262 DAKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSLV--------------------DKVTEGRVL 321 (347)
T ss_dssp TSCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECGGGT--------------------TTSGGGEEC
T ss_pred CCCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCCCC--------------------CccccCCEe
Confidence 568999999999999999999999999999999999999999999875432 247999999
Q ss_pred cccccCCC
Q 003005 702 NATASLDP 709 (858)
Q Consensus 702 d~~~A~~~ 709 (858)
|+.+|++.
T Consensus 322 d~~~A~~~ 329 (347)
T 2iy9_A 322 NAEKAISM 329 (347)
T ss_dssp CHHHHHHH
T ss_pred cHHHHHHH
Confidence 99999964
No 23
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=5.3e-48 Score=427.13 Aligned_cols=304 Identities=23% Similarity=0.344 Sum_probs=219.9
Q ss_pred cCCCcccccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchh
Q 003005 169 LGLPQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAAS 248 (858)
Q Consensus 169 ~~~~~~~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~ 248 (858)
++++. +|.. +++|+||+||||||||+ +||+|.++... ...+........+.. +.... .....++.+.
T Consensus 19 i~~~~-aw~~----g~~G~gV~VaViDtGi~-~hp~l~~~~~~-----~~~~~~~~~~~~d~~-~~~~~-~~~~~~~~~~ 85 (340)
T 3lpc_A 19 VKADK-VWDM----GFTGQNVVVAVVDTGIL-HHRDLNANVLP-----GYDFISNSQISLDGD-GRDAD-PFDEGDWFDN 85 (340)
T ss_dssp CCHHH-HHHH----TCSCTTCEEEEEESCBC-CCTTTGGGBCC-----CEECCCCHHHHCSSS-SSBSC-CBCCCCCBCT
T ss_pred CCHHH-HHHh----cCCCCCeEEEEEcCCCC-CChhhhccccc-----CccccCCccccccCC-CccCC-cccccccccc
Confidence 34434 7876 78999999999999998 99999976440 001100000000000 00000 0000000000
Q ss_pred hhhcCccCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHH
Q 003005 249 AITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQ 328 (858)
Q Consensus 249 ~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~ 328 (858)
.. ......+.....|..||||||||||+|...+. .++.||||+|+|+.+|++.. .++..++++++|+|
T Consensus 86 ~~---~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~--------~g~~GvAp~a~l~~~~v~~~-~~~~~~~~~~ai~~ 153 (340)
T 3lpc_A 86 WA---CGGRPDPRKERSDSSWHGSHVAGTIAAVTNNR--------IGVAGVAYGAKVVPVRALGR-CGGYDSDISDGLYW 153 (340)
T ss_dssp TT---TSCTTCGGGSCBCCCCHHHHHHHHHHCCCSSS--------SSCCCTTTTSEEEEEECCBT-TBCCHHHHHHHHHH
T ss_pred cc---ccCCCCcccCCCCCCCCHHHHHHHHHccCCCC--------CcceeecCCCEEEEEEEecC-CCCcHHHHHHHHHH
Confidence 00 00001112234688999999999999975432 23579999999999999987 44788999999999
Q ss_pred HHH----------CCCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCC-CCCCCCCceEEEee
Q 003005 329 AAQ----------DGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPK-SMSSFSPWIFTVGA 397 (858)
Q Consensus 329 a~~----------~g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA 397 (858)
+++ .+++|||||||.... ....+..+++.+.++|++||+||||+|.... .+|+..+++|+|||
T Consensus 154 a~~~~~~~~~~~~~~~~Vin~S~G~~~~------~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga 227 (340)
T 3lpc_A 154 AAGGRIAGIPENRNPAKVINMSLGSDGQ------CSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGA 227 (340)
T ss_dssp HHTCCCTTSCCCSSCCSEEEECCCEESC------CCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEE
T ss_pred HhcccccccccccCCCeEEEeCcCCCCC------cchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEec
Confidence 998 899999999997432 2356788899999999999999999998653 46788899999998
Q ss_pred cccCceeeeEEEeCCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEecccc
Q 003005 398 ASHDRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRF 477 (858)
Q Consensus 398 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~ 477 (858)
++.+
T Consensus 228 ~~~~---------------------------------------------------------------------------- 231 (340)
T 3lpc_A 228 TTSR---------------------------------------------------------------------------- 231 (340)
T ss_dssp ECTT----------------------------------------------------------------------------
T ss_pred CCCC----------------------------------------------------------------------------
Confidence 6422
Q ss_pred ccCcchHHHHHHHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeE
Q 003005 478 VLGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVA 557 (858)
Q Consensus 478 ~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 557 (858)
T Consensus 232 -------------------------------------------------------------------------------- 231 (340)
T 3lpc_A 232 -------------------------------------------------------------------------------- 231 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecccccccCCCCCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHH
Q 003005 558 CILGGLKANFSNSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPH 637 (858)
Q Consensus 558 ~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~ 637 (858)
+.++.||++||.+ ||+|||.+|+++.+...... ..+.|..++||||||||
T Consensus 232 --------------~~~~~~S~~g~~~-------------di~ApG~~i~s~~~~~~~~~---~~~~~~~~sGTS~AaP~ 281 (340)
T 3lpc_A 232 --------------GIRASFSNYGVDV-------------DLAAPGQDILSTVDSGTRRP---VSDAYSFMAGTSMATPH 281 (340)
T ss_dssp --------------SSBCTTCCBSTTC-------------CEEEECSSEEEEEESCSSSC---CSEEEEEECSHHHHHHH
T ss_pred --------------CCcCCCCCCCCCc-------------eEEecCCCeecccCCCCcCC---CCCcceecccHhHHHHH
Confidence 2368899999754 99999999999986543211 23469999999999999
Q ss_pred HHHHHHHHHHh-C---CCCCHHHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccccccCCC
Q 003005 638 IAGLAALIKQK-F---PSFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNATASLDP 709 (858)
Q Consensus 638 VAG~aALl~q~-~---P~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 709 (858)
|||++|||+|+ + |.+++++||++|++||+++.. .++..+|+|+||+.+|++.
T Consensus 282 vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~--------------------~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 282 VSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNG--------------------RLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSS--------------------CCSSCCCSSBCCHHHHHHH
T ss_pred HHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCC--------------------CCCCCcccceecHHHHHHH
Confidence 99999999998 5 999999999999999987642 1245899999999999864
No 24
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=1.2e-46 Score=458.50 Aligned_cols=361 Identities=21% Similarity=0.288 Sum_probs=250.8
Q ss_pred CCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCC--CHHHHHHHHHHHHH-----CCCCEE
Q 003005 265 FDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGG--FAADVVAAIDQAAQ-----DGVDII 337 (858)
Q Consensus 265 ~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~--~~~~i~~ai~~a~~-----~g~~VI 337 (858)
.|++||||||||||+|.. ++ .++.||||+|+|+.+|+++...+. ...+++.+|.+|++ .|++||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~--------~g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SS--------RDVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SS--------SSSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-CC--------CCceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 478899999999999985 21 346799999999999999764332 45677777777777 799999
Q ss_pred EEccCCCCCCCCCCccCCHHHHHHHHHH-hCCCEEEEecCCCCCCCC--CCCCC--CCceEEEeecccCceeeeEEEeCC
Q 003005 338 SLSITPNRRPPGIATFFNPIDMALLSAA-KAGIFVVQAAGNTGPSPK--SMSSF--SPWIFTVGAASHDRIYTNSIILGN 412 (858)
Q Consensus 338 N~S~G~~~~~~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~g~~~~--~~~~~--~p~vitVgA~~~~~~~~~~~~~~~ 412 (858)
|||||...... ..+.+..+++++. ++|++||+||||+|.... ..|+. ++++|+|||++.+........
T Consensus 338 NmS~G~~~~~~----~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys--- 410 (1354)
T 3lxu_X 338 NMSYGEHANWS----NSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYA--- 410 (1354)
T ss_dssp EECCCCCCSCS----SCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC------
T ss_pred EcCCccCCCCC----ccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCcccccc---
Confidence 99999865322 2357788888885 899999999999998643 35664 899999999864421100000
Q ss_pred ceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHHHHHHHH
Q 003005 413 SLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAK 492 (858)
Q Consensus 413 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~ 492 (858)
.
T Consensus 411 -------------------------------------~------------------------------------------ 411 (1354)
T 3lxu_X 411 -------------------------------------M------------------------------------------ 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------c------------------------------------------
Confidence 0
Q ss_pred hCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEecccccccCCCCC
Q 003005 493 NLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANFSNSAP 572 (858)
Q Consensus 493 ~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 572 (858)
.....+
T Consensus 412 --------------------------------------------------------------------------~~~~~g 417 (1354)
T 3lxu_X 412 --------------------------------------------------------------------------REKLPG 417 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------ccCCCC
Confidence 000114
Q ss_pred ccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHHHHHH----h
Q 003005 573 KIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQ----K 648 (858)
Q Consensus 573 ~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q----~ 648 (858)
.++.|||+||+.+ +++||||+|||++|+++... .++.|..++|||||||||||++|||++ +
T Consensus 418 ~~asFSS~GPt~d-------g~~KpDIaAPG~~I~St~~~--------~~~~y~~~SGTSmAAP~VAGvAALLLSalkq~ 482 (1354)
T 3lxu_X 418 NVYTWTSRDPCID-------GGQGVTVCAPGGAIASVPQF--------TMSKSQLMNGTSMAAPHVAGAVALLISGLKQQ 482 (1354)
T ss_dssp CCCCCCCCSCCSS-------SSCCEEEEEEC-----------------------CCCCGGGCHHHHHHHHHHHHHHHHHT
T ss_pred ccccccCCCCCcc-------CCCcceEEecCceEEEeecC--------CCCceecCCCCCHHHHHHHHHHHHHHHhhHhh
Confidence 5899999999987 79999999999999997532 245899999999999999999999986 8
Q ss_pred CCCCCHHHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccccccCCCCeeeeCCcchhhhhccccC
Q 003005 649 FPSFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNATASLDPGLVFDASYNDYMSFLCGIN 728 (858)
Q Consensus 649 ~P~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~~v~~~~~~~~~~~~~~~~ 728 (858)
+|+|++++||++|++||+++.. .+++.||+|+||+.+|++....++....+++.|.|..+
T Consensus 483 ~P~LTp~qVk~lL~~TA~~~~~--------------------~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~ 542 (1354)
T 3lxu_X 483 NIEYSPYSIKRAISVTATKLGY--------------------VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVG 542 (1354)
T ss_dssp TCCCCHHHHHHHHHTTSBCCTT--------------------SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEET
T ss_pred CCCCCHHHHHHHHHHhCccCCC--------------------CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEec
Confidence 9999999999999999998643 22467999999999999987777777778899998776
Q ss_pred C-CcceeeeccCcccccCCCCCCCCCCCCCeEEEeecCcceEEEE----EEEE---cCC--CceEEEEeec-CCcceEEE
Q 003005 729 G-SSPVVLNYTGQNCWAYNSTISGADLNLPSITIARLNQSRTVQR----TLTN---IAG--NETYSVGWSA-PYGVSMKV 797 (858)
Q Consensus 729 ~-~~~~i~~~~~~~~~~~~~~~~~~~~n~~si~~~~~~~~~~~~~----tv~n---~~~--~~ty~~~~~~-~~~~~v~~ 797 (858)
. +...|..... . . ....++++ ++.| ... ...|.+.+.- ...-.|++
T Consensus 543 ~~~~rgIylR~~------------~-~----------~~~~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~~wv~~ 599 (1354)
T 3lxu_X 543 NNADKGIHLRQG------------V-Q----------RNSIDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQPWVQC 599 (1354)
T ss_dssp TTTBSSEEECSS------------C-C----------CSCEEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESSTTEEE
T ss_pred CCCCCceEEecc------------c-c----------CCceEEEEEEeeeecCcccCChhhccceEEEEEEecCCCceec
Confidence 5 3444433211 0 0 01122222 2311 111 2222222111 11124454
Q ss_pred eecEEEEeCCCEEEEEEEEEEecCCCCeEEEEEEEEe----CCccEEEEeEEEEEEeeccc
Q 003005 798 SPTHFSIASGEKQVLNVFFNATTSGTAASFGRIGLFG----NQGHIVNIPLSVVARLSYNA 854 (858)
Q Consensus 798 ~p~~~tl~~g~s~~~~v~~~~~~~~~~~~~G~i~~~~----~~~~~l~iP~~~~~~~~~~~ 854 (858)
|..+.| .++.++|.|.+++.......+++.|.... ..++..+||+.+......+.
T Consensus 600 -p~~l~l-~~~~r~~~v~vDp~~L~~G~h~~~v~~~D~~~~~~gp~f~ipvTv~~P~~~~~ 658 (1354)
T 3lxu_X 600 -GAFLDL-SYGTRSIAVRVDPTGLQPGVHSAVIRAYDTDCVQKGSLFEIPVTVVQPHVLES 658 (1354)
T ss_dssp -CSCEEC-TTSCEEEEEEECGGGCCSEEEEEEEEEEESSCTTSCCSEEEEEEEEECBCCCC
T ss_pred -ccceee-cCCCceEEEEECCCCCCCcceeEEEEEEEcCCcccCceEEeeEEEEeeeeccC
Confidence 777877 79999999999988887788889998764 24689999999998865443
No 25
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=1.6e-46 Score=402.73 Aligned_cols=234 Identities=29% Similarity=0.446 Sum_probs=199.6
Q ss_pred cccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCc
Q 003005 175 AWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGI 254 (858)
Q Consensus 175 ~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~ 254 (858)
+|.. +++|+||+|||||||||++||+|.++ +...++|.+.
T Consensus 21 aw~~----~~~G~gv~VaViDtGvd~~h~~l~~~------------------------------~~~~~~~~~~------ 60 (284)
T 1sh7_A 21 NYNA----NFDGFGVTAYVIDTGVNNNHEEFGGR------------------------------SVSGYDFVDN------ 60 (284)
T ss_dssp BCCC----SCCCTTCEEEEEESCCCTTCTTTTTC------------------------------EEEEEETTTT------
T ss_pred hhhc----CCCCCCCEEEEEcCCCCCCChhHcCC------------------------------ccccccccCC------
Confidence 5665 78999999999999999999999964 2233444432
Q ss_pred cCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHHC--
Q 003005 255 FNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQD-- 332 (858)
Q Consensus 255 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~-- 332 (858)
...+.|..+|||||||||+|+. .||||+|+|+.+|+++....+..++++++|+|++++
T Consensus 61 ------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~ 120 (284)
T 1sh7_A 61 ------DADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNAS 120 (284)
T ss_dssp ------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCC
T ss_pred ------CCCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCC
Confidence 1345688999999999999862 499999999999999875567889999999999984
Q ss_pred CCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCC-CCCCCCCCceEEEeecccCceeeeEEEeC
Q 003005 333 GVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSP-KSMSSFSPWIFTVGAASHDRIYTNSIILG 411 (858)
Q Consensus 333 g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~~p~vitVgA~~~~~~~~~~~~~~ 411 (858)
+++|||||||... ...++.+++.+.++|++||+||||+|... ..+|+..+++|+|||++.+
T Consensus 121 ~~~Vin~S~G~~~--------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---------- 182 (284)
T 1sh7_A 121 GPSVANMSLGGGQ--------STALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTSS---------- 182 (284)
T ss_dssp SSEEEEECCCBSC--------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECTT----------
T ss_pred CCcEEEeCCCCCC--------CHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecCC----------
Confidence 7999999999752 35788999999999999999999999764 3567889999999986421
Q ss_pred CceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHHHHHHH
Q 003005 412 NSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETA 491 (858)
Q Consensus 412 ~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~ 491 (858)
T Consensus 183 -------------------------------------------------------------------------------- 182 (284)
T 1sh7_A 183 -------------------------------------------------------------------------------- 182 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEecccccccCCCC
Q 003005 492 KNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANFSNSA 571 (858)
Q Consensus 492 ~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 571 (858)
T Consensus 183 -------------------------------------------------------------------------------- 182 (284)
T 1sh7_A 183 -------------------------------------------------------------------------------- 182 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHHHHHHhCCC
Q 003005 572 PKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQKFPS 651 (858)
Q Consensus 572 ~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~ 651 (858)
+.++.||++||.. ||+|||++|++++ .++.|..++|||||||||||++|||+|++|+
T Consensus 183 ~~~~~~S~~G~~~-------------di~ApG~~i~s~~----------~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~ 239 (284)
T 1sh7_A 183 DSRSSFSNWGSCV-------------DLFAPGSQIKSAW----------YDGGYKTISGTSMATPHVAGVAALYLQENNG 239 (284)
T ss_dssp SBBCTTCCBSTTC-------------CEEEECSSEEEEC----------TTSSEEEECSHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCcCcccCCCCcc-------------EEEeccCCeEEec----------CCCCEEEccChHHHHHHHHHHHHHHHHHCCC
Confidence 2368899999875 8999999999998 4558999999999999999999999999999
Q ss_pred CCHHHHHHHHHccccccc
Q 003005 652 FSPSAIASALSTSATLYD 669 (858)
Q Consensus 652 lsp~~ik~~L~~TA~~~~ 669 (858)
|+++|||++|++||++..
T Consensus 240 lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 240 LTPLQLTGLLNSRASENK 257 (284)
T ss_dssp CCHHHHHHHHHHHSEESC
T ss_pred CCHHHHHHHHHhhCccCC
Confidence 999999999999998764
No 26
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=2.6e-46 Score=400.19 Aligned_cols=225 Identities=30% Similarity=0.461 Sum_probs=193.3
Q ss_pred CCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCccCCCCCCCC
Q 003005 184 TAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSSQDYAS 263 (858)
Q Consensus 184 ~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~~~~~~~~~~ 263 (858)
.+|+||+|||||||||++||+|.++. ...++|. ..
T Consensus 28 ~~G~gv~VaViDsGvd~~H~~l~~~~------------------------------~~~~~~~---------------~~ 62 (279)
T 2pwa_A 28 SAGQGSCVYVIDTGIEASHPEFEGRA------------------------------QMVKTYY---------------YS 62 (279)
T ss_dssp TTTTTEEEEEEESCCCTTCGGGTTCE------------------------------EEEEESS---------------SC
T ss_pred CCCCCCEEEEEeCCCCCCChhHhCcc------------------------------ccccCCC---------------CC
Confidence 79999999999999999999999642 2223332 12
Q ss_pred CCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHHCCC-------CE
Q 003005 264 PFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGV-------DI 336 (858)
Q Consensus 264 ~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~g~-------~V 336 (858)
+.|..+|||||||||+|+. .||||+|+|+.+|+++....+..++++++|+|++++++ +|
T Consensus 63 ~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~~~V 128 (279)
T 2pwa_A 63 SRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVV 128 (279)
T ss_dssp SSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEE
T ss_pred CCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCCccE
Confidence 4578899999999999862 59999999999999987555888999999999999887 99
Q ss_pred EEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCC-CCCCCCCceEEEeecccCceeeeEEEeCCceE
Q 003005 337 ISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPK-SMSSFSPWIFTVGAASHDRIYTNSIILGNSLT 415 (858)
Q Consensus 337 IN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~ 415 (858)
||||||.. ..+.+.++++.+.++|++||+||||+|.+.. .+|+..+++|+|||++.+
T Consensus 129 in~S~G~~--------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~-------------- 186 (279)
T 2pwa_A 129 ASLSLGGG--------YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY-------------- 186 (279)
T ss_dssp EEECCCEE--------CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT--------------
T ss_pred EEecCCCC--------CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecCC--------------
Confidence 99999964 2367889999999999999999999998653 457889999999986422
Q ss_pred EEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHHHHHHHHhCC
Q 003005 416 ISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLS 495 (858)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~G 495 (858)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 2pwa_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEecccccccCCCCCccc
Q 003005 496 AAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANFSNSAPKIM 575 (858)
Q Consensus 496 a~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a 575 (858)
+.++
T Consensus 187 ----------------------------------------------------------------------------~~~~ 190 (279)
T 2pwa_A 187 ----------------------------------------------------------------------------DRRS 190 (279)
T ss_dssp ----------------------------------------------------------------------------SBBC
T ss_pred ----------------------------------------------------------------------------CCcC
Confidence 2468
Q ss_pred cccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHHHHHHhCCCCCHH
Q 003005 576 YYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQKFPSFSPS 655 (858)
Q Consensus 576 ~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~lsp~ 655 (858)
.||++||.. ||+|||++|++++ .++.|..++|||||||||||++|||+|+ |+++++
T Consensus 191 ~~S~~G~~~-------------di~APG~~i~s~~----------~~~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~ 246 (279)
T 2pwa_A 191 SFSNYGSVL-------------DIFGPGTDILSTW----------IGGSTRSISGTSMATPHVAGLAAYLMTL-GKTTAA 246 (279)
T ss_dssp TTCCBSTTC-------------CEEEECSSEEEEE----------TTTEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTT
T ss_pred CcCCCCCcc-------------eEEEecCCeEEee----------cCCCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHH
Confidence 899999865 8999999999998 4558999999999999999999999999 999999
Q ss_pred HHHHHHHccccccc
Q 003005 656 AIASALSTSATLYD 669 (858)
Q Consensus 656 ~ik~~L~~TA~~~~ 669 (858)
|||++|++||++..
T Consensus 247 ~v~~~L~~tA~~~~ 260 (279)
T 2pwa_A 247 SACRYIADTANKGD 260 (279)
T ss_dssp THHHHHHHHSEESC
T ss_pred HHHHHHHHhCcccc
Confidence 99999999998753
No 27
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=9.6e-46 Score=396.29 Aligned_cols=236 Identities=30% Similarity=0.414 Sum_probs=198.9
Q ss_pred cccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCc
Q 003005 175 AWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGI 254 (858)
Q Consensus 175 ~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~ 254 (858)
+|.. +++|+||+|||||||||++||+|.++. ...++|.++
T Consensus 23 ~~~~----~~~G~gv~VaViDtGid~~Hpdl~~~~------------------------------~~~~d~~~~------ 62 (278)
T 2b6n_A 23 NYHT----DYDGSGVTAFVIDTGVLNTHNEFGGRA------------------------------SSGYDFIDN------ 62 (278)
T ss_dssp EEEC----SCCCTTCEEEEEESCCCTTCGGGTTCE------------------------------EEEEETTTT------
T ss_pred hccc----CCCCCCCEEEEEeCCCCCCChhHhccc------------------------------ccCeecCCC------
Confidence 6765 789999999999999999999998642 233444432
Q ss_pred cCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHH--C
Q 003005 255 FNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQ--D 332 (858)
Q Consensus 255 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~--~ 332 (858)
...+.|..+|||||||||+|+. .||||+|+|+.+|++++...+..++++++|+|+++ .
T Consensus 63 ------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~ 122 (278)
T 2b6n_A 63 ------DYDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNAS 122 (278)
T ss_dssp ------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCC
T ss_pred ------CCCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCC
Confidence 1345688999999999999862 49999999999999987556788999999999998 5
Q ss_pred CCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCC-CCCCCCCceEEEeecccCceeeeEEEeC
Q 003005 333 GVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPK-SMSSFSPWIFTVGAASHDRIYTNSIILG 411 (858)
Q Consensus 333 g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~ 411 (858)
+++|||||||... .+.+.++++++.++|++||+||||++.... .+|+..+++|+|||++.+
T Consensus 123 g~~Vin~S~G~~~--------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---------- 184 (278)
T 2b6n_A 123 GPAVANMSLGGGA--------SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTSN---------- 184 (278)
T ss_dssp SSEEEEECCCEEC--------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT----------
T ss_pred CCeEEEECCCCCc--------CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCCC----------
Confidence 9999999999743 357888999999999999999999998653 357888999999986422
Q ss_pred CceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHHHHHHH
Q 003005 412 NSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETA 491 (858)
Q Consensus 412 ~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~ 491 (858)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEecccccccCCCC
Q 003005 492 KNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANFSNSA 571 (858)
Q Consensus 492 ~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 571 (858)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHHHHHHhCCC
Q 003005 572 PKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQKFPS 651 (858)
Q Consensus 572 ~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~ 651 (858)
+.++.||++||.. ||+|||++|++++.. .++.|..++|||||||||||++|||+|++|+
T Consensus 185 ~~~~~~S~~G~~~-------------di~ApG~~i~s~~~~--------~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~ 243 (278)
T 2b6n_A 185 DSRSSFSNYGTCL-------------DIYAPGSSITSSWYT--------SNSATNTISGTSMASPHVAGVAALYLDENPN 243 (278)
T ss_dssp SBBCTTCCBSTTC-------------CEEEECSSEEEECTT--------STTCEEEECSHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCcCCcCCCCCCC-------------eEEeCCCCeECcccC--------CCCCEEEeCcHHHHHHHHHHHHHHHHHhCCC
Confidence 2367899999865 899999999998753 2358999999999999999999999999999
Q ss_pred CCHHHHHHHHHccccccc
Q 003005 652 FSPSAIASALSTSATLYD 669 (858)
Q Consensus 652 lsp~~ik~~L~~TA~~~~ 669 (858)
|+++|||++|++||++..
T Consensus 244 lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 244 LSPAQVTNLLKTRATADK 261 (278)
T ss_dssp CCHHHHHHHHHHHSEESC
T ss_pred CCHHHHHHHHHHhCccCC
Confidence 999999999999998753
No 28
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=1.2e-45 Score=395.65 Aligned_cols=236 Identities=29% Similarity=0.396 Sum_probs=200.1
Q ss_pred cccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCc
Q 003005 175 AWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGI 254 (858)
Q Consensus 175 ~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~ 254 (858)
+|.. +++|+||+|||||||||++||+|.++. ...++|..
T Consensus 23 a~~~----~~~G~gv~VaViDtGvd~~h~~l~~~~------------------------------~~~~~~~~------- 61 (276)
T 4dzt_A 23 SYTY----TATGRGVNVYVIDTGIRTTHREFGGRA------------------------------RVGYDALG------- 61 (276)
T ss_dssp CEEC----SCCCTTCEEEEEESCCCTTCGGGTTCE------------------------------EEEEETTS-------
T ss_pred ceec----CCCCCCcEEEEEccCCCCCChhHccCe------------------------------eccccCCC-------
Confidence 6766 789999999999999999999998642 22233322
Q ss_pred cCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHHC--
Q 003005 255 FNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQD-- 332 (858)
Q Consensus 255 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~-- 332 (858)
..+.|..||||||||||+|.. .||||+|+|+.+|+++....+..++++++++|++++
T Consensus 62 -------~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~ 120 (276)
T 4dzt_A 62 -------GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHR 120 (276)
T ss_dssp -------SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCC
T ss_pred -------CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCC
Confidence 234578899999999999862 499999999999999876668899999999999987
Q ss_pred CCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCCC-CCCCCCceEEEeecccCceeeeEEEeC
Q 003005 333 GVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKS-MSSFSPWIFTVGAASHDRIYTNSIILG 411 (858)
Q Consensus 333 g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~p~vitVgA~~~~~~~~~~~~~~ 411 (858)
+++|||||||... ...++++++.+.++|++||+||||++..... .|+..+++|+|||++.+
T Consensus 121 ~~~vin~S~g~~~--------~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---------- 182 (276)
T 4dzt_A 121 RPAVANMSLGGGV--------STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTSS---------- 182 (276)
T ss_dssp SSEEEEECCCEEC--------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT----------
T ss_pred CCeEEEECCCCCC--------CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECCC----------
Confidence 8999999999642 3678899999999999999999999986543 47888999999986422
Q ss_pred CceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHHHHHHH
Q 003005 412 NSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETA 491 (858)
Q Consensus 412 ~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~ 491 (858)
T Consensus 183 -------------------------------------------------------------------------------- 182 (276)
T 4dzt_A 183 -------------------------------------------------------------------------------- 182 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEecccccccCCCC
Q 003005 492 KNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANFSNSA 571 (858)
Q Consensus 492 ~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 571 (858)
T Consensus 183 -------------------------------------------------------------------------------- 182 (276)
T 4dzt_A 183 -------------------------------------------------------------------------------- 182 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHHHHHHhCCC
Q 003005 572 PKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQKFPS 651 (858)
Q Consensus 572 ~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~ 651 (858)
+.++.||++||.. ||+|||++|++++... +..|..++|||||||||||++|||+|++|+
T Consensus 183 ~~~~~~S~~g~~~-------------dv~ApG~~i~s~~~~~--------~~~~~~~sGTS~AaP~vaG~aAll~~~~p~ 241 (276)
T 4dzt_A 183 DARASFSNYGSCV-------------DLFAPGASIPSAWYTS--------DTATQTLNGTSMATPHVAGVAALYLEQNPS 241 (276)
T ss_dssp SBBCTTCCBSTTC-------------CEEEECSSEEEECTTS--------SSCEEEECSHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCcCCcCCCCCCc-------------eEEeCCCCeEccccCC--------CCceEEeeEHHHHHHHHHHHHHHHHHHCCC
Confidence 2478899999976 8999999999998532 347999999999999999999999999999
Q ss_pred CCHHHHHHHHHccccccccC
Q 003005 652 FSPSAIASALSTSATLYDKN 671 (858)
Q Consensus 652 lsp~~ik~~L~~TA~~~~~~ 671 (858)
++++|||++|++||++....
T Consensus 242 lt~~~v~~~L~~tA~~~~~~ 261 (276)
T 4dzt_A 242 ATPASVASAILNGATTGRLS 261 (276)
T ss_dssp CCHHHHHHHHHHHSEESCCB
T ss_pred CCHHHHHHHHHhhCcCCccC
Confidence 99999999999999986543
No 29
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=6.2e-46 Score=426.95 Aligned_cols=296 Identities=19% Similarity=0.216 Sum_probs=216.2
Q ss_pred cCCCcccccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchh
Q 003005 169 LGLPQGAWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAAS 248 (858)
Q Consensus 169 ~~~~~~~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~ 248 (858)
++++. +|.. +++|+||+|||||||||++||+|.++.. . ...++|.+.
T Consensus 25 i~~~~-aw~~----g~~G~gv~VaViDtGvd~~Hpdl~~~~~-----~-----------------------~~~~d~~~~ 71 (471)
T 1p8j_A 25 LNVKE-AWAQ----GFTGHGIVVSILDDGIEKNHPDLAGNYD-----P-----------------------GASFDVNDQ 71 (471)
T ss_dssp CCCHH-HHHT----TCSCTTCEEEEEEBCCCTTCTTTGGGBC-----G-----------------------GGCEETTTT
T ss_pred CChHH-HHhc----CCCCCCCEEEEEeCCcCCCChhHhhccC-----c-----------------------cCcccccCC
Confidence 44433 7776 7899999999999999999999997533 0 012233322
Q ss_pred hhhcCccCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHH
Q 003005 249 AITRGIFNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQ 328 (858)
Q Consensus 249 ~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~ 328 (858)
. ....+...+.|.++|||||||||+|..+++ ..+.||||+|+|+.+|+++. ..+++++|++|
T Consensus 72 ~------~~p~~~~~~~d~~gHGT~vAGiiaa~~~n~--------~g~~GvAp~a~i~~~rv~~g----~~~~~~~ai~~ 133 (471)
T 1p8j_A 72 D------PDPQPRYTQMNDNRHGTRCAGEVAAVANNG--------VCGVGVAYNARIGGVRMLDG----EVTDAVEARSL 133 (471)
T ss_dssp B------SCCCCCCCTTCTTCHHHHHHHHHHCCSSSS--------SSCCCTTTTSEEEEEECSSS----CCCHHHHHHHH
T ss_pred C------CCCCCccCCCCCCCcHHHHHHHHHeeccCC--------CCCEEECCCCeEEEEEccCC----chhHHHHHHHh
Confidence 0 000111234678999999999999975432 23579999999999999863 35689999999
Q ss_pred HHH-CCCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHh-----CCCEEEEecCCCCCCCCC----CCCCCCceEEEeec
Q 003005 329 AAQ-DGVDIISLSITPNRRPPGIATFFNPIDMALLSAAK-----AGIFVVQAAGNTGPSPKS----MSSFSPWIFTVGAA 398 (858)
Q Consensus 329 a~~-~g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~-----~Gi~vV~AAGN~g~~~~~----~~~~~p~vitVgA~ 398 (858)
+++ ++++|||||||..............+.+++..+.+ +|++||+||||+|..... .+..++++|+|||+
T Consensus 134 a~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~ 213 (471)
T 1p8j_A 134 GLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSA 213 (471)
T ss_dssp TSCTTTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEE
T ss_pred hhccCCCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecc
Confidence 999 89999999999754211111122345556655543 699999999999975321 12345789999986
Q ss_pred ccCceeeeEEEeCCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccc
Q 003005 399 SHDRIYTNSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFV 478 (858)
Q Consensus 399 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~ 478 (858)
+.+
T Consensus 214 ~~~----------------------------------------------------------------------------- 216 (471)
T 1p8j_A 214 TQF----------------------------------------------------------------------------- 216 (471)
T ss_dssp CTT-----------------------------------------------------------------------------
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 422
Q ss_pred cCcchHHHHHHHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEE
Q 003005 479 LGLSTIKQAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVAC 558 (858)
Q Consensus 479 ~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (858)
T Consensus 217 -------------------------------------------------------------------------------- 216 (471)
T 1p8j_A 217 -------------------------------------------------------------------------------- 216 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EecccccccCCCCCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHH
Q 003005 559 ILGGLKANFSNSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHI 638 (858)
Q Consensus 559 i~~~~~~~~~~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~V 638 (858)
+.++.||++||... ...+|...+||..|+++.. .++.|..++|||||||||
T Consensus 217 -------------g~~a~~S~~g~~~~-------~~~~~~~~~~g~~i~st~~---------~~~~~~~~sGTS~AaP~V 267 (471)
T 1p8j_A 217 -------------GNVPWYSEACSSTL-------ATTYSSGNQNEKQIVTTDL---------RQKCTESHTGTSASAPLA 267 (471)
T ss_dssp -------------SCCCTTCCBCTTCC-------EEEECCCSTTSCCEEEEET---------TTEEEEEECSHHHHHHHH
T ss_pred -------------CCcccccCCCCcce-------EEeCCCCCCCCCCEEEeeC---------CCCccccCCCcccccchh
Confidence 23688999999876 4567888888899999974 234799999999999999
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHccccccccCCCccccccccCCCCCCCCCCCCCccccccccccccCCC
Q 003005 639 AGLAALIKQKFPSFSPSAIASALSTSATLYDKNGGPIMAQRAYAKPDENQSPATPFDMGSGFVNATASLDP 709 (858)
Q Consensus 639 AG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 709 (858)
||++|||+|++|+|++++||++|++||+++.......... ......+..||+|+||+.+|++.
T Consensus 268 AG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n--------~~g~~~~~~~G~G~vda~~Av~~ 330 (471)
T 1p8j_A 268 AGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATN--------GVGRKVSHSYGYGLLDAGAMVAL 330 (471)
T ss_dssp HHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEEC--------TTSCEEBTTTBTCBCCHHHHHHH
T ss_pred hhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceec--------CCCcccCCCCCCEEEcHhHHHHH
Confidence 9999999999999999999999999999876432211100 01112356899999999999974
No 30
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=4.9e-45 Score=422.19 Aligned_cols=283 Identities=23% Similarity=0.251 Sum_probs=210.8
Q ss_pred cccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCc
Q 003005 175 AWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGI 254 (858)
Q Consensus 175 ~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~ 254 (858)
+|.. +++|+||+|||||||||++||+|.++.. ..+.++|.++.
T Consensus 46 aw~~----g~tG~gv~VaViDtGvd~~Hpdl~~~~~----------------------------~~~~~d~~~~~----- 88 (503)
T 2id4_A 46 LWYN----NITGAGVVAAIVDDGLDYENEDLKDNFC----------------------------AEGSWDFNDNT----- 88 (503)
T ss_dssp HHHT----TCSCTTCEEEEEESCCCTTSTTTTTTBC----------------------------GGGCEETTTTB-----
T ss_pred HHhc----CCCCCCeEEEEEeCCCCCCChhHhhccc----------------------------ccCcccCCCCC-----
Confidence 6765 7899999999999999999999998643 00123343320
Q ss_pred cCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHHCCC
Q 003005 255 FNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGV 334 (858)
Q Consensus 255 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~g~ 334 (858)
.+.....|.++|||||||||+|..+++ ..+.||||+|+|+.+|+++. .+...+++++|+|+++++
T Consensus 89 ----~~~~p~~d~~gHGT~vAGiiaa~~~n~--------~~~~GvAp~a~i~~~rv~~~--~~~~~~~~~ai~~a~~~~- 153 (503)
T 2id4_A 89 ----NLPKPRLSDDYHGTRCAGEIAAKKGNN--------FCGVGVGYNAKISGIRILSG--DITTEDEAASLIYGLDVN- 153 (503)
T ss_dssp ----SCCCCCSTTTTHHHHHHHHHHCCSSSS--------SSCCCTTTTSEEEEEECTTS--CCCHHHHHHHTTTTTTTC-
T ss_pred ----CCCCCCCCCCChHHHHHHHHHhccCCC--------CCcEEECCCCEEEEEEeeCC--CCChHHHHHHHHhHhhcC-
Confidence 011122578899999999999975332 23479999999999999975 367888999999999988
Q ss_pred CEEEEccCCCCCCCCCCccCCHHHHHHHHHH-----hCCCEEEEecCCCCCCCC--CCC--CCCCceEEEeecccCceee
Q 003005 335 DIISLSITPNRRPPGIATFFNPIDMALLSAA-----KAGIFVVQAAGNTGPSPK--SMS--SFSPWIFTVGAASHDRIYT 405 (858)
Q Consensus 335 ~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~~~~--~~~--~~~p~vitVgA~~~~~~~~ 405 (858)
+|||||||..............+.++++.+. .+|++||+||||+|.... .++ ..++++|+|||++.+
T Consensus 154 ~Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~---- 229 (503)
T 2id4_A 154 DIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHK---- 229 (503)
T ss_dssp SEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTT----
T ss_pred CEEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCC----
Confidence 9999999975422111122345677777666 479999999999997532 222 245679999886422
Q ss_pred eEEEeCCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHH
Q 003005 406 NSIILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIK 485 (858)
Q Consensus 406 ~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~ 485 (858)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEeccccc
Q 003005 486 QAFETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKA 565 (858)
Q Consensus 486 ~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 565 (858)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCccccccccCCCCCCCCCCCcCcCCCcccC----CCceEEeeccCCCCCCccccCccceeecccCchhHHHHHH
Q 003005 566 NFSNSAPKIMYYSARGPDPEDSFLDDADIMKPNLVA----PGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGL 641 (858)
Q Consensus 566 ~~~~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~A----PG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~ 641 (858)
+.++.||++||.. |++| ||..|+++.. .++.|..++|||||||||||+
T Consensus 230 ------~~~a~~S~~g~~~-------------~~~a~~~gpG~~I~st~~---------~~~~~~~~sGTS~AaP~VAG~ 281 (503)
T 2id4_A 230 ------DLHPPYSEGCSAV-------------MAVTYSSGSGEYIHSSDI---------NGRCSNSHGGTSAAAPLAAGV 281 (503)
T ss_dssp ------SCCCTTCCCCTTE-------------EEEEECSBTTBCEEEECS---------TTCEEEEECSHHHHHHHHHHH
T ss_pred ------CCcCCcCCCCCcc-------------eEeecCCCCCCceEeecC---------CCCceecCCCccccchhhhHH
Confidence 2367899999986 5665 9999999942 345899999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHccccccccC-CCccccccccCCCCCCCCCCCCCccccccccccccCCC
Q 003005 642 AALIKQKFPSFSPSAIASALSTSATLYDKN-GGPIMAQRAYAKPDENQSPATPFDMGSGFVNATASLDP 709 (858)
Q Consensus 642 aALl~q~~P~lsp~~ik~~L~~TA~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 709 (858)
+|||+|++|+|+++|||.+|++||+++... ....... ......+..||+|+||+.+|++.
T Consensus 282 aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~--------~~g~~~~~~~G~G~vda~~Av~~ 342 (503)
T 2id4_A 282 YTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDS--------AMGKKYSHRYGFGKIDAHKLIEM 342 (503)
T ss_dssp HHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEEC--------SSSSEEBTTTBTCBCCHHHHHHH
T ss_pred HHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceec--------CCCCccCcccCCcEecHHHHHHH
Confidence 999999999999999999999999987643 1100000 01112345799999999999974
No 31
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=6.9e-45 Score=413.24 Aligned_cols=283 Identities=21% Similarity=0.241 Sum_probs=204.6
Q ss_pred CCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCccCCCCCCC
Q 003005 183 ETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSSQDYA 262 (858)
Q Consensus 183 ~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~~~~~~~~~ 262 (858)
+++|+||+|||||||||++||+|.++.. ...+++..+ .+......
T Consensus 22 ~~tG~GV~VaVIDTGId~~HpdL~gr~~-----------------------------~~~~~~v~~------~dg~~f~~ 66 (546)
T 2qtw_B 22 PDGGSLVEVYLLDTSIQSDHREIEGRVM-----------------------------VTDFENVPE------EDGTRFHR 66 (546)
T ss_dssp --CCTTSEEEEEESCCCTTSTTTTTTEE-----------------------------EEEEECCCC------CC------
T ss_pred CCCCCCcEEEEECCCCCCCChHHccccc-----------------------------ccCcccccC------CCCccccC
Confidence 6899999999999999999999997532 000010000 00000012
Q ss_pred CCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHHC------CCCE
Q 003005 263 SPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQD------GVDI 336 (858)
Q Consensus 263 ~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~------g~~V 336 (858)
.+.|..||||||||||+|+. .||||+|+|+.+|+++..+.+..++++++|+|+++. +++|
T Consensus 67 ~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~V 132 (546)
T 2qtw_B 67 QASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLV 132 (546)
T ss_dssp -CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEE
T ss_pred CCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeE
Confidence 34678999999999999873 499999999999999875557889999999999984 8999
Q ss_pred EEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCC-CCCCCCCceEEEeecccCceeeeEEEeCCceE
Q 003005 337 ISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPK-SMSSFSPWIFTVGAASHDRIYTNSIILGNSLT 415 (858)
Q Consensus 337 IN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~ 415 (858)
||||||+. +...++.+++++.++|++||+||||+|.+.. .+|+..+++|+|||++.+....
T Consensus 133 INmSlGg~--------~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~a---------- 194 (546)
T 2qtw_B 133 VLLPLAGG--------YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQPV---------- 194 (546)
T ss_dssp EEECEEEE--------CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCBC----------
T ss_pred EEecCCCC--------CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCcc----------
Confidence 99999963 2367889999999999999999999998653 4588899999999976331100
Q ss_pred EEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHHHHHHHHhCC
Q 003005 416 ISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLS 495 (858)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~G 495 (858)
T Consensus 195 -------------------------------------------------------------------------------- 194 (546)
T 2qtw_B 195 -------------------------------------------------------------------------------- 194 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEecccccccCCCCCccc
Q 003005 496 AAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANFSNSAPKIM 575 (858)
Q Consensus 496 a~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a 575 (858)
..-.
T Consensus 195 ----------------------------------------------------------------------------~~s~ 198 (546)
T 2qtw_B 195 ----------------------------------------------------------------------------TLGT 198 (546)
T ss_dssp ----------------------------------------------------------------------------EETT
T ss_pred ----------------------------------------------------------------------------cccC
Confidence 0001
Q ss_pred cccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHHHHHHhCCCCCHH
Q 003005 576 YYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQKFPSFSPS 655 (858)
Q Consensus 576 ~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~lsp~ 655 (858)
.||++||.. ||+|||++|+|+++.. ++.|..++|||||||||||++|||+|++|+|+|+
T Consensus 199 ~fSn~G~~v-------------DI~APG~~I~St~~~~--------~~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~ 257 (546)
T 2qtw_B 199 LGTNFGRCV-------------DLFAPGEDIIGASSDC--------STCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLA 257 (546)
T ss_dssp EECCBSTTC-------------CEEEECSSEEEECTTS--------TTCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHH
T ss_pred CcCCCCCcc-------------eEEecCccEEeeccCC--------CCcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHH
Confidence 278888744 9999999999998532 2479999999999999999999999999999999
Q ss_pred HHHHHHHccccccccCCCccccccccCCCCCC-CCCCCCCcccccc--ccccccCCC
Q 003005 656 AIASALSTSATLYDKNGGPIMAQRAYAKPDEN-QSPATPFDMGSGF--VNATASLDP 709 (858)
Q Consensus 656 ~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~G~G~--vd~~~A~~~ 709 (858)
|||++|++||.+....+..+........|+.- ..+.....+|+|+ .++..+...
T Consensus 258 qVr~~L~~tAt~~~i~~~~~p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~a~s~ 314 (546)
T 2qtw_B 258 ELRQRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHSG 314 (546)
T ss_dssp HHHHHHHHTSEESCSCGGGSCHHHHTTSCCEECCCCCTTCC--CCCEEEEEECCCCC
T ss_pred HHHHHHHHhccccccCCccCccccCCCCccchhccCCcccccCCCcchhchhccCCC
Confidence 99999999997643222100000000011100 1122456789999 888888753
No 32
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=7.5e-45 Score=390.18 Aligned_cols=226 Identities=32% Similarity=0.462 Sum_probs=192.9
Q ss_pred CCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCccCCCCCCCC
Q 003005 184 TAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGIFNSSQDYAS 263 (858)
Q Consensus 184 ~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~~~~~~~~~~ 263 (858)
.+|+||+|||||||||++||+|.++. ...++|.. .
T Consensus 29 ~~G~gv~VaViDtGvd~~h~~l~~~~------------------------------~~~~~~~~---------------~ 63 (279)
T 3f7m_A 29 SAGAGACVYVIDTGVEDTHPDFEGRA------------------------------KQIKSYAS---------------T 63 (279)
T ss_dssp TTTTTEEEEEEESCCCTTCGGGTTCE------------------------------EEEEECSS---------------S
T ss_pred CCCCCCEEEEEcCCCCCCChhhcccc------------------------------ccccCCCC---------------C
Confidence 59999999999999999999998742 22233322 1
Q ss_pred CCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHHCC-------CCE
Q 003005 264 PFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDG-------VDI 336 (858)
Q Consensus 264 ~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~~g-------~~V 336 (858)
..|..||||||||||+|+. .||||+|+|+.+|+++....+..++++++++|+++++ ++|
T Consensus 64 ~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~V 129 (279)
T 3f7m_A 64 ARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTV 129 (279)
T ss_dssp SSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEE
T ss_pred CCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCeE
Confidence 1278899999999999862 5999999999999998766688999999999999876 899
Q ss_pred EEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecCCCCCCCCC-CCCCCCceEEEeecccCceeeeEEEeCCceE
Q 003005 337 ISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAGNTGPSPKS-MSSFSPWIFTVGAASHDRIYTNSIILGNSLT 415 (858)
Q Consensus 337 IN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~ 415 (858)
||||||.. ....++++++.+.++|++||+||||+|..... .|+..+++|+|||++.+
T Consensus 130 in~S~g~~--------~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~-------------- 187 (279)
T 3f7m_A 130 ASMSLGGG--------YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDSN-------------- 187 (279)
T ss_dssp EEECCCEE--------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT--------------
T ss_pred EEeCCCcC--------ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCCC--------------
Confidence 99999964 34688999999999999999999999986543 47888999999986422
Q ss_pred EEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHHHHHHHHhCC
Q 003005 416 ISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLS 495 (858)
Q Consensus 416 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~G 495 (858)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 3f7m_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEecccccccCCCCCccc
Q 003005 496 AAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANFSNSAPKIM 575 (858)
Q Consensus 496 a~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a 575 (858)
+.++
T Consensus 188 ----------------------------------------------------------------------------~~~~ 191 (279)
T 3f7m_A 188 ----------------------------------------------------------------------------DVRS 191 (279)
T ss_dssp ----------------------------------------------------------------------------SBBC
T ss_pred ----------------------------------------------------------------------------CCCC
Confidence 2468
Q ss_pred cccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccCCCCCCccccCccceeecccCchhHHHHHHHHHHHHhCCCCCHH
Q 003005 576 YYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSSLGTDSVEFQGESFAMMSGTSMAAPHIAGLAALIKQKFPSFSPS 655 (858)
Q Consensus 576 ~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~P~lsp~ 655 (858)
.||++||.. ||+|||++|+++. .++.|..++|||||||||||++|||+|++|+ +++
T Consensus 192 ~~S~~g~~~-------------di~ApG~~i~s~~----------~~~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~ 247 (279)
T 3f7m_A 192 TFSNYGRVV-------------DIFAPGTSITSTW----------IGGRTNTISGTSMATPHIAGLAAYLFGLEGG-SAG 247 (279)
T ss_dssp TTCCBSTTC-------------CEEEECSSEEEEC----------GGGCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTT
T ss_pred CCCCCCCCC-------------eEEECCCCeEeec----------CCCCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHH
Confidence 899999865 8999999999998 4568999999999999999999999999999 999
Q ss_pred HHHHHHHcccccccc
Q 003005 656 AIASALSTSATLYDK 670 (858)
Q Consensus 656 ~ik~~L~~TA~~~~~ 670 (858)
+||++|++||++...
T Consensus 248 ~v~~~L~~tA~~~~~ 262 (279)
T 3f7m_A 248 AMCGRIQTLSTKNVL 262 (279)
T ss_dssp THHHHHHHHSEESCC
T ss_pred HHHHHHHHhcccccc
Confidence 999999999987543
No 33
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=3.3e-44 Score=424.69 Aligned_cols=321 Identities=20% Similarity=0.226 Sum_probs=198.8
Q ss_pred cccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCc
Q 003005 175 AWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGI 254 (858)
Q Consensus 175 ~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~ 254 (858)
+|.. +++|+||+|||||||||++||+|.++.. .+.++|..+
T Consensus 62 aw~~----g~~G~gV~VaViDtGid~~Hpdl~~~~~-----------------------------~~~~~~~~~------ 102 (600)
T 2oxa_A 62 AHRT----GVLGHGVNVAVVDDGLAIAHPDLADNVR-----------------------------PGSKNVVTG------ 102 (600)
T ss_dssp HHHT----TCSCTTCEEEEESSCCCTTCTTTGGGBC-----------------------------SCCBCTTTC------
T ss_pred HHhc----CCCCCCcEEEEecCCcCCCCcchhhccc-----------------------------cCceeccCC------
Confidence 5664 7999999999999999999999997543 111223221
Q ss_pred cCCCCCCCCCCC-CCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCC-HHHHHHHHHHHHHC
Q 003005 255 FNSSQDYASPFD-GDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGF-AADVVAAIDQAAQD 332 (858)
Q Consensus 255 ~~~~~~~~~~~d-~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~-~~~i~~ai~~a~~~ 332 (858)
.++..|.| .+||||||||||+|. .++ ..+.||||+|+|+.+|+++...... ...+++....+..+
T Consensus 103 ----~~d~~p~d~~~gHGT~vAGiiaa~-~n~--------~g~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~ 169 (600)
T 2oxa_A 103 ----SDDPTPTDPDTGHGTSVSGIIAAV-DNA--------IGTKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASR 169 (600)
T ss_dssp ----SSCCCCCSTTCCHHHHHHHHHHCC-SSS--------SSCCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHH
T ss_pred ----CCCCCCCCCCCCCccHHHHHhhcc-cCC--------CcceEEccCCceEEEeeecCcccchHHHHHHHHhhhhccc
Confidence 01123444 789999999999998 322 2357999999999999998743332 23344444447778
Q ss_pred CCCEEEEccCCCCCCCCC-CccCCHHHHHH-HH--HHhCCCEEEEecCCCCCCCCCCCCCCCceEEEeecccCceeeeEE
Q 003005 333 GVDIISLSITPNRRPPGI-ATFFNPIDMAL-LS--AAKAGIFVVQAAGNTGPSPKSMSSFSPWIFTVGAASHDRIYTNSI 408 (858)
Q Consensus 333 g~~VIN~S~G~~~~~~~~-~~~~~~~~~a~-~~--a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~ 408 (858)
+++|||||||........ ..+...+..++ +. +.++|++||+||||+|...... ..+
T Consensus 170 ~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~-----~~~--------------- 229 (600)
T 2oxa_A 170 DNRVFNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAG-----GYV--------------- 229 (600)
T ss_dssp TCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEET-----TEE---------------
T ss_pred CCeEEEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCC-----cce---------------
Confidence 999999999986432111 11112222222 22 4578999999999998742100 000
Q ss_pred EeCCceEEEeeecCCCCCceeEEEEcccccCCCCcccCCCCccccCCCCCCccccccceEEEEEeccccccCcchHHHHH
Q 003005 409 ILGNSLTISGVGLAPGTDKMYTLISALHALNNNTTTTDDMYVGECQDSSNFNQDLVQGNLLICSYSIRFVLGLSTIKQAF 488 (858)
Q Consensus 409 ~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~ 488 (858)
.||-... .....+.|...
T Consensus 230 -------------------~~Pa~~~-----------~~~p~~~~n~~-------------------------------- 247 (600)
T 2oxa_A 230 -------------------LNRTGNG-----------PKLPFENSNLD-------------------------------- 247 (600)
T ss_dssp -------------------EEEESCS-----------SCCCSSBTTSS--------------------------------
T ss_pred -------------------ecCcccc-----------ccccccccccC--------------------------------
Confidence 0000000 00001112100
Q ss_pred HHHHhCCCeEEEEEECCCCcCcccCCCCCCCCeEEecChhhHHHHHHHHhcccccccccceEEeeeeeEEEecccccccC
Q 003005 489 ETAKNLSAAGIVFYMDPFVIGFQLNPTPMKMPGIIIPSPDDSKILLQYYNSSLERDEVTKKIIKFGAVACILGGLKANFS 568 (858)
Q Consensus 489 ~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ip~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 568 (858)
.+ .....+|+|++.
T Consensus 248 ------------------------------~~------------------------~~s~~vItVgA~------------ 261 (600)
T 2oxa_A 248 ------------------------------PS------------------------NSNFWNLVVSAL------------ 261 (600)
T ss_dssp ------------------------------GG------------------------GGSSSEEEEEEE------------
T ss_pred ------------------------------Cc------------------------ccCceeEEEecc------------
Confidence 00 011123444432
Q ss_pred CCCCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccC-------CCCC-----------------CccccCcc
Q 003005 569 NSAPKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSS-------LGTD-----------------SVEFQGES 624 (858)
Q Consensus 569 ~~~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~-------~~~~-----------------~~~~~~~~ 624 (858)
...+.++.||++||+. ||+|||++|.+..+. .... ......+.
T Consensus 262 ~~~g~~a~fS~~G~~v-------------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 328 (600)
T 2oxa_A 262 NADGVRSSYSSVGSNI-------------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDY 328 (600)
T ss_dssp CTTSSBCTTCCBCTTE-------------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCE
T ss_pred cCCCCcCCcCCCCCCe-------------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCccc
Confidence 2235689999999986 899999985443221 1000 00011234
Q ss_pred ceeecccCchhHHHHHHHHHHHHhCCCCCHHHHHHHHHccccccccCCCccccc--------------cccCCCCCCCCC
Q 003005 625 FAMMSGTSMAAPHIAGLAALIKQKFPSFSPSAIASALSTSATLYDKNGGPIMAQ--------------RAYAKPDENQSP 690 (858)
Q Consensus 625 y~~~sGTSMAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~g~~~~~~--------------~~~~~~~~~~~~ 690 (858)
|..++|||||||||||++|||+|++|+|+|++||++|++||++++..+.++... ..| .......
T Consensus 329 y~~~sGTS~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w--~~n~~g~ 406 (600)
T 2oxa_A 329 NGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGW--ERNAAGM 406 (600)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCS--EECTTSC
T ss_pred ccccccchHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccc--cccCCCc
Confidence 899999999999999999999999999999999999999999987554321100 000 0001122
Q ss_pred CCCCccccccccccccCCCC
Q 003005 691 ATPFDMGSGFVNATASLDPG 710 (858)
Q Consensus 691 ~~~~~~G~G~vd~~~A~~~~ 710 (858)
..++.||||+||+.+|++..
T Consensus 407 ~~~~~~G~G~vda~~Av~~A 426 (600)
T 2oxa_A 407 WFSPTYGFGLIDVNKALELA 426 (600)
T ss_dssp EEBTTTBTCBCCHHHHHHHH
T ss_pred cccccCCCchhhHHHHHHHH
Confidence 23578999999999999743
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=5.8e-42 Score=407.12 Aligned_cols=155 Identities=21% Similarity=0.300 Sum_probs=108.2
Q ss_pred cccccCCCCCCCCCcEEEEeccCcCCCCCCCCCCCCCCCCCCCCCcCccccccCCCCCCCCCceeeeeeecchhhhhcCc
Q 003005 175 AWIQEGGYETAGEGVVIGFIDTGIDPTHPSFADDASEHSYPVPSHFSGICEVTRDFPSGSCNRKLIGARHFAASAITRGI 254 (858)
Q Consensus 175 ~w~~~~~~~~~G~Gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~kv~g~~~~~~~~~~~~~ 254 (858)
+|.. +++|+||+|||||||||++||||.++.. .+.++|..+
T Consensus 62 aw~~----g~tG~GV~VaViDtGid~~HpDL~~n~~-----------------------------~~~~~~~~~------ 102 (600)
T 3hjr_A 62 AHRT----GVLGQGVNVAVVDDGLAIAHPDLADNVR-----------------------------PGSKNVVTG------ 102 (600)
T ss_dssp HHHH----TCSCTTCEEEEESSCCCTTCTTTGGGBC-----------------------------SCCBCTTTS------
T ss_pred HHHc----CCCCCCeEEEEEcCCCCCCChhHhhccc-----------------------------cCcceeecC------
Confidence 6666 7999999999999999999999997643 011222211
Q ss_pred cCCCCCCCCCCCCCCCcccchhhhccCCCCCcccccccccceeecCCcceeeeeehhcCCCCCCHHHHHHHH-HHHHHCC
Q 003005 255 FNSSQDYASPFDGDGHGSHTASVAAGNHGIPVVVTGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAI-DQAAQDG 333 (858)
Q Consensus 255 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai-~~a~~~g 333 (858)
..+.....|.++|||||||||||..+ + ..+.||||+|+|+.+|++++...+..++++.++ +++..++
T Consensus 103 ---~~dp~p~~~~~gHGThVAGiIAa~~n-~--------~g~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~ 170 (600)
T 3hjr_A 103 ---SDDPTPTDPDTAHGTSVSGIIAAVDN-A--------IGTKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRD 170 (600)
T ss_dssp ---SSCCCCCSTTCCHHHHHHHHHHCCSS-S--------SSCCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHT
T ss_pred ---CCCCCCCCCCCChHHHHHHHHhEeCC-C--------CCcEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcC
Confidence 01112233578999999999998632 1 135799999999999999886667788887776 6778889
Q ss_pred CCEEEEccCCCCCCCCC--CccCCHHHHHHHHH--HhCCCEEEEecCCCCC
Q 003005 334 VDIISLSITPNRRPPGI--ATFFNPIDMALLSA--AKAGIFVVQAAGNTGP 380 (858)
Q Consensus 334 ~~VIN~S~G~~~~~~~~--~~~~~~~~~a~~~a--~~~Gi~vV~AAGN~g~ 380 (858)
++|||||||........ ......++.++..+ ..+|+++|+||||.+.
T Consensus 171 ~~I~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~ 221 (600)
T 3hjr_A 171 NRVFNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFN 221 (600)
T ss_dssp CSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSS
T ss_pred CCEEecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccc
Confidence 99999999975432111 11111223333222 2579999999999875
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.91 E-value=1.9e-25 Score=258.83 Aligned_cols=100 Identities=28% Similarity=0.390 Sum_probs=79.5
Q ss_pred ceeecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHH---CCCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEE
Q 003005 295 NASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQ---DGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFV 371 (858)
Q Consensus 295 ~~~GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~---~g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~v 371 (858)
.+.||||+|+|+.+++.+ ..++++++|+||++ ++++|||||||....... ..+.+.++.++..|..+||+|
T Consensus 273 ~~~gvAp~a~i~~~~~~~-----~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~-~~~~~~~~~~~~~a~~~Gi~v 346 (552)
T 1t1e_A 273 VAGALAPGAKIAVYFAPN-----TDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWA-PASIAAMNRAFLDAAALGVTV 346 (552)
T ss_dssp HHHHHCTTSEEEEEECCS-----SHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSC-HHHHHHHHHHHHHHHHTTCEE
T ss_pred hhhccCCCCeEEEEEcCC-----CCchHHHHHHHHHhcccCCCCEEEecccCCcccCC-HHHHHHHHHHHHHHHhCCeEE
Confidence 457999999999998632 35789999999998 799999999997532100 112346788888899999999
Q ss_pred EEecCCCCCCC--------CCCCCCCCceEEEeeccc
Q 003005 372 VQAAGNTGPSP--------KSMSSFSPWIFTVGAASH 400 (858)
Q Consensus 372 V~AAGN~g~~~--------~~~~~~~p~vitVgA~~~ 400 (858)
|+||||+|... ..+|+.+|+||+|||++.
T Consensus 347 v~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 347 LAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp EEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred EEecCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 99999999643 346788999999999864
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.85 E-value=3.6e-22 Score=220.48 Aligned_cols=102 Identities=16% Similarity=0.151 Sum_probs=80.4
Q ss_pred ecCCcceeeeeehhcCCCCCCHHHHHHHHHHHHH-CCCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEecC
Q 003005 298 GMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQ-DGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAAG 376 (858)
Q Consensus 298 GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~~-~g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAG 376 (858)
.+||+++++.+++.+. .....++++.+|+||++ ++++|||||||..........+.+.++.+++.|..+||+||+|||
T Consensus 91 ~~aP~a~~~~~~~~~~-~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 91 SAGGAVQQLLFYMADQ-SASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HTTSCEEEEEEEEECT-TSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hcCCCCcEEEEEeCCC-CCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 5799999999998765 33566889999999998 899999999997431100011235788888999999999999999
Q ss_pred CCCCCCC-------------CCCCCCCceEEEeeccc
Q 003005 377 NTGPSPK-------------SMSSFSPWIFTVGAASH 400 (858)
Q Consensus 377 N~g~~~~-------------~~~~~~p~vitVgA~~~ 400 (858)
|+|...+ .+|+.+|+|++||+++.
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~ 206 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 206 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeec
Confidence 9997532 45688999999999864
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.99 E-value=9.4e-10 Score=126.50 Aligned_cols=100 Identities=16% Similarity=0.238 Sum_probs=64.4
Q ss_pred ecCCcceeeeeehhcCCCCCCHHHHHHHHHHHH--HCCCCEEEEccCCCCCCCCCCccCCHHHHHHHHHHhCCCEEEEec
Q 003005 298 GMAPRSHIAVYKALYKSFGGFAADVVAAIDQAA--QDGVDIISLSITPNRRPPGIATFFNPIDMALLSAAKAGIFVVQAA 375 (858)
Q Consensus 298 GvAP~A~l~~~kv~~~~~~~~~~~i~~ai~~a~--~~g~~VIN~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AA 375 (858)
+++++..++.+-.-.. ......++..+++.. .+-++|||+|||.....-. ..+.+.++.++..+..+||.|++|+
T Consensus 263 a~~~~i~~~~~~~~g~--~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~-~~y~~~~~~~~~~~~~~Gitv~~AS 339 (544)
T 3edy_A 263 SAGANISTWVYSSPGR--HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLS-SAYIQRVNTELMKAAARGLTLLFAS 339 (544)
T ss_dssp HHSTTSEEEEECCCSC--CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSC-HHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred ccCCCceEEEEecCCc--ccccccHHHHHHHHhccCCCCcEEEecCCCcccccC-HHHHHHHHHHHHHHHhCCeEEEEec
Confidence 4555555554432211 111123444444433 2468999999997542211 1233567778888999999999999
Q ss_pred CCCCCCC----------CCCCCCCCceEEEeeccc
Q 003005 376 GNTGPSP----------KSMSSFSPWIFTVGAASH 400 (858)
Q Consensus 376 GN~g~~~----------~~~~~~~p~vitVgA~~~ 400 (858)
||+|... ..+|+.+|+|++||+++.
T Consensus 340 GD~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 340 GDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp CSSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 9999753 246788999999999863
No 38
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.31 E-value=1.8e-06 Score=73.02 Aligned_cols=47 Identities=19% Similarity=0.212 Sum_probs=42.7
Q ss_pred CceeEEEEEcceeeEEEEEcCHHHHHHHhcCCCeeEEEeCccccccCC
Q 003005 116 EKYLKLYSYHYLINGFSVFVTPQQAEKLSRRREVANVVSDFSVRTATT 163 (858)
Q Consensus 116 ~~~~~~~~~~~~~ng~~v~~~~~~l~~L~~~p~V~~v~~~~~~~~~~~ 163 (858)
.+.+++++|.+ ++||+++++++++++|+++|+|.+||++..+++..+
T Consensus 32 ~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~~tt 78 (80)
T 3cnq_P 32 KGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRALSA 78 (80)
T ss_dssp TTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEECCC
T ss_pred cCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEEeee
Confidence 35688999998 999999999999999999999999999999887654
No 39
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.22 E-value=1.9e-06 Score=77.95 Aligned_cols=45 Identities=24% Similarity=0.152 Sum_probs=41.0
Q ss_pred CceeEEEEEcceeeEEEEEcCHHHHHHHhcCCCeeEEEeCccccc
Q 003005 116 EKYLKLYSYHYLINGFSVFVTPQQAEKLSRRREVANVVSDFSVRT 160 (858)
Q Consensus 116 ~~~~~~~~~~~~~ng~~v~~~~~~l~~L~~~p~V~~v~~~~~~~~ 160 (858)
.+.+++++|.+.|+||+++++++++++|+++|+|.+||++..++.
T Consensus 69 ~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 69 YLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 113 (114)
T ss_dssp CCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred cCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEec
Confidence 356889999989999999999999999999999999999987754
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.06 E-value=7.8e-06 Score=74.91 Aligned_cols=44 Identities=25% Similarity=0.176 Sum_probs=40.5
Q ss_pred ceeEEEEEcceeeEEEEEcCHHHHHHHhcCCCeeEEEeCccccc
Q 003005 117 KYLKLYSYHYLINGFSVFVTPQQAEKLSRRREVANVVSDFSVRT 160 (858)
Q Consensus 117 ~~~~~~~~~~~~ng~~v~~~~~~l~~L~~~p~V~~v~~~~~~~~ 160 (858)
+.++.++|.+.+|||++++++++++.|+++|+|.+|+++..++.
T Consensus 80 g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 80 LTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp CCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 56889999989999999999999999999999999999987753
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=97.91 E-value=4e-05 Score=63.90 Aligned_cols=43 Identities=19% Similarity=0.176 Sum_probs=37.6
Q ss_pred eeEEEEE-cceeeEEEEEcCHHHHHHHhcC--CCeeEEEeCccccc
Q 003005 118 YLKLYSY-HYLINGFSVFVTPQQAEKLSRR--REVANVVSDFSVRT 160 (858)
Q Consensus 118 ~~~~~~~-~~~~ng~~v~~~~~~l~~L~~~--p~V~~v~~~~~~~~ 160 (858)
.++.+.| ..+++||+++++++.++.|+++ |.|.+||++..+..
T Consensus 30 g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 30 GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 3567778 3699999999999999999999 89999999987753
No 42
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=97.74 E-value=0.00012 Score=71.98 Aligned_cols=86 Identities=19% Similarity=0.254 Sum_probs=62.8
Q ss_pred CccccCCCCCCccc------cccceEEEEEeccccccCc-chHHHHHHHHHhCCCeEEEEEECCCCc--Cccc-CCCCCC
Q 003005 449 YVGECQDSSNFNQD------LVQGNLLICSYSIRFVLGL-STIKQAFETAKNLSAAGIVFYMDPFVI--GFQL-NPTPMK 518 (858)
Q Consensus 449 ~~~~c~~~~~~~~~------~~~Gkivl~~~~~~~~~g~-~~~~~~~~~~~~~Ga~g~i~~n~~~~~--~~~~-~~~~~~ 518 (858)
....|.....+... ..+|+|+|+.| |. |+|.+|+.+|+++||.++|+||+.... ...+ .+....
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~R------G~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~ 155 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQR------GGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVD 155 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEES------CTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCS
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEEC------CCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCc
Confidence 35678765433211 25789999999 78 999999999999999999999975221 1111 223457
Q ss_pred CCeEEecChhhHHHHHHHHhccc
Q 003005 519 MPGIIIPSPDDSKILLQYYNSSL 541 (858)
Q Consensus 519 ip~~~i~~~~~~~~l~~~~~~~~ 541 (858)
||.++| +..+|..|++++....
T Consensus 156 IPsv~I-s~~~G~~L~~~L~~G~ 177 (194)
T 3icu_A 156 IVAIMI-GNLKGTKILQSIQRGI 177 (194)
T ss_dssp SEEEEE-CHHHHHHHHHHHHTTC
T ss_pred eeEEEE-CHHHHHHHHHHHHCCC
Confidence 898877 7788999999987653
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=95.95 E-value=0.006 Score=48.86 Aligned_cols=44 Identities=25% Similarity=0.243 Sum_probs=39.5
Q ss_pred CCceeEEEEEcceeeEEEEEcCHHHHHHHhcCCCeeEEEeCcccc
Q 003005 115 GEKYLKLYSYHYLINGFSVFVTPQQAEKLSRRREVANVVSDFSVR 159 (858)
Q Consensus 115 ~~~~~~~~~~~~~~ng~~v~~~~~~l~~L~~~p~V~~v~~~~~~~ 159 (858)
..+.++.++|. .++++++++|++.++.|+++|+|++||+|..++
T Consensus 20 ~~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 20 GIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp GGTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred HCCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 44679999996 799999999999999999999999999998764
No 44
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.45 E-value=0.028 Score=51.08 Aligned_cols=77 Identities=19% Similarity=0.233 Sum_probs=57.2
Q ss_pred CcceEEEEEEEEcCC-CceEEEEeecCCcceEEEeecEEEEeCCCEEEEEEEEEEecCCCCeEEEEEEEEeCCccEEEEe
Q 003005 765 NQSRTVQRTLTNIAG-NETYSVGWSAPYGVSMKVSPTHFSIASGEKQVLNVFFNATTSGTAASFGRIGLFGNQGHIVNIP 843 (858)
Q Consensus 765 ~~~~~~~~tv~n~~~-~~ty~~~~~~~~~~~v~~~p~~~tl~~g~s~~~~v~~~~~~~~~~~~~G~i~~~~~~~~~l~iP 843 (858)
..+.+.+..|+|.|. +..|++... . ..+++|.+.+|+||++..++|+|.+... ..+++.|.+.-+++..+.++
T Consensus 40 ~~~~~~~~~l~N~g~~~~~f~~~~~--~--~F~i~P~~g~L~pg~~~~i~V~F~P~~~--g~~~~~l~v~~~~g~~~~v~ 113 (122)
T 2ys4_A 40 KYSTQKILLVRNIGNKNAVFHIKTC--R--PFSIEPAIGTLNVGESMQLEVEFEPQSV--GDHSGRLIVCYDTGEKVFVS 113 (122)
T ss_dssp SSCEEEEEEEECCSSSCEEEEEECC--T--TEEEESSEEEECTTCEEEEEEEECCSSS--BCCCCBCEEEESSSCEECCE
T ss_pred CCeEEEEEEEEECCCCCEEEEEecC--C--CeEEECCcCEECCCCEEEEEEEEEcCCC--ccEEEEEEEEECCCCEEEEE
Confidence 345667789999998 788876642 2 5778899999999999999999997753 33456666665666777776
Q ss_pred EEEE
Q 003005 844 LSVV 847 (858)
Q Consensus 844 ~~~~ 847 (858)
..+.
T Consensus 114 L~G~ 117 (122)
T 2ys4_A 114 LYGA 117 (122)
T ss_dssp ECCC
T ss_pred EEEE
Confidence 5543
No 45
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=94.72 E-value=0.35 Score=44.90 Aligned_cols=93 Identities=10% Similarity=-0.004 Sum_probs=67.2
Q ss_pred eEEEeecC--cceEEEEEEEEcCC-CceEEEEeecC----CcceEEEeecEEEEeCCCEEEEEEEEEEecC-------CC
Q 003005 758 SITIARLN--QSRTVQRTLTNIAG-NETYSVGWSAP----YGVSMKVSPTHFSIASGEKQVLNVFFNATTS-------GT 823 (858)
Q Consensus 758 si~~~~~~--~~~~~~~tv~n~~~-~~ty~~~~~~~----~~~~v~~~p~~~tl~~g~s~~~~v~~~~~~~-------~~ 823 (858)
.|-++++. ...+-+++|+|.|. +.+|.+..... ..-.++++|..-+|+||++.+|.|++.+.+. ..
T Consensus 33 ~ldFG~v~~~~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L~Pge~~~I~v~~~v~~~~~~~ln~g~ 112 (140)
T 3qbt_B 33 EFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYVSKDSVTILNSGE 112 (140)
T ss_dssp EEEEEEECBTCCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECBCHHHHHHHHHSS
T ss_pred eEEeeeceeeeeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCcccccCCCCeeEEEEEEEEccCcccccccch
Confidence 34445443 34556778999999 99998875321 1235778899999999999999999997552 11
Q ss_pred CeEEEEEEEEeCCccEEEEeEEEEEEe
Q 003005 824 AASFGRIGLFGNQGHIVNIPLSVVARL 850 (858)
Q Consensus 824 ~~~~G~i~~~~~~~~~l~iP~~~~~~~ 850 (858)
.-++.-|++.=.+|.+..||+.+.+..
T Consensus 113 ~~l~diLvL~Ve~G~d~fI~v~g~~~p 139 (140)
T 3qbt_B 113 DKIEDILVLHLDRGKDYFLTISGNYLP 139 (140)
T ss_dssp SCSCEEEEEEETTSCEEEEEEEEEECC
T ss_pred hhhheeEEEEeecCCcEEEEEeccccC
Confidence 334566777767899999999887654
No 46
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=93.52 E-value=0.21 Score=55.62 Aligned_cols=74 Identities=11% Similarity=0.136 Sum_probs=55.0
Q ss_pred CCccccccceEEEEEeccccccCcchHHHHHHHHHhCCCeEEEEEECCCCc--CcccCCCCCCCCeEEecChhhHHHHHH
Q 003005 458 NFNQDLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDPFVI--GFQLNPTPMKMPGIIIPSPDDSKILLQ 535 (858)
Q Consensus 458 ~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~--~~~~~~~~~~ip~~~i~~~~~~~~l~~ 535 (858)
.+...+++|||+|+.+ |.|.+..|+.+|..+||.|+|++++.... +.........+|.+.+ +.+++..|++
T Consensus 107 D~~~~dv~GkIvlv~~------g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~I-s~~~a~~L~~ 179 (421)
T 2ek8_A 107 DVAGKDLNGKIALIQR------GNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGI-TKQEGDALAA 179 (421)
T ss_dssp TTTTSCCTTSEEEEEC------CSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEE-CHHHHHHHHH
T ss_pred hcCCCCcCceEEEEeC------CCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEe-CHHHHHHHHH
Confidence 3444478999999998 66789999999999999999999976321 1111123456888876 6778888888
Q ss_pred HHh
Q 003005 536 YYN 538 (858)
Q Consensus 536 ~~~ 538 (858)
.+.
T Consensus 180 ~l~ 182 (421)
T 2ek8_A 180 NLR 182 (421)
T ss_dssp HHH
T ss_pred Hhh
Confidence 773
No 47
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=91.14 E-value=1.1 Score=40.03 Aligned_cols=53 Identities=17% Similarity=0.160 Sum_probs=43.6
Q ss_pred eEEEEEEEEcCC-CceEEEEeecCCcceEEEeecEEEEeCCCEEEEEEEEEEecC
Q 003005 768 RTVQRTLTNIAG-NETYSVGWSAPYGVSMKVSPTHFSIASGEKQVLNVFFNATTS 821 (858)
Q Consensus 768 ~~~~~tv~n~~~-~~ty~~~~~~~~~~~v~~~p~~~tl~~g~s~~~~v~~~~~~~ 821 (858)
..+++.|.|... +.+|.+++....++.+. .+..|+|+||+.+++.|.+.++..
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v~~g~~~~~~v~v~~~~~ 86 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQVEPGEVLNLPMSLGADPD 86 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEECTTCEEEEEEEEEECGG
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEECCCCEEEEEEEEEEChH
Confidence 467788999999 99999999866665543 255799999999999999999875
No 48
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.64 E-value=1.7 Score=38.20 Aligned_cols=89 Identities=12% Similarity=0.120 Sum_probs=57.6
Q ss_pred CeEEEeecC--cceEEEEEEEEcCC-CceEEEEeec-CCcceEEEeecEEEEeCCCEEEEEEEEEEecCCCCeEEEEEEE
Q 003005 757 PSITIARLN--QSRTVQRTLTNIAG-NETYSVGWSA-PYGVSMKVSPTHFSIASGEKQVLNVFFNATTSGTAASFGRIGL 832 (858)
Q Consensus 757 ~si~~~~~~--~~~~~~~tv~n~~~-~~ty~~~~~~-~~~~~v~~~p~~~tl~~g~s~~~~v~~~~~~~~~~~~~G~i~~ 832 (858)
..+-++.+. ...+.+.+++|.|+ +..|++.... ..+...+++|.+=+|+||++.+|.|++.+... +.| .=.|.+
T Consensus 15 ~~ldFG~v~~g~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i~pg~~~~i~V~f~~~~~-g~f-~~~i~v 92 (112)
T 2e6j_A 15 ELLDIGKVFTGSAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGIIEPSGVQAIQISFSSIIL-GNF-EEEFLV 92 (112)
T ss_dssp SEEEEEEEESSCCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEECTTBCCEEEEEECCCCC-EEE-EEEECE
T ss_pred ccEecEeEEECCEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEECCCCEEEEEEEEECCCc-ceE-EEEEEE
Confidence 345555543 34566788999999 8888874211 11235778899999999999999999997643 333 345666
Q ss_pred EeCCc-cEEEEeEEEE
Q 003005 833 FGNQG-HIVNIPLSVV 847 (858)
Q Consensus 833 ~~~~~-~~l~iP~~~~ 847 (858)
.-++. ..+.+-+-+.
T Consensus 93 ~~~g~~~~~~L~i~G~ 108 (112)
T 2e6j_A 93 NVNGSPEPVKLTIRGC 108 (112)
T ss_dssp EESSCSSCCCEEEEEE
T ss_pred EECCCCceEEEEEEEE
Confidence 54432 3344544443
No 49
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=88.58 E-value=0.19 Score=62.61 Aligned_cols=25 Identities=32% Similarity=0.642 Sum_probs=23.1
Q ss_pred CCCCCCcEEEEeccCcCCCCCCCCC
Q 003005 183 ETAGEGVVIGFIDTGIDPTHPSFAD 207 (858)
Q Consensus 183 ~~~G~Gv~VaVIDtGid~~Hp~f~~ 207 (858)
.|+|+||+|||+|||||+.+|.|+-
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq~ 56 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLET 56 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSSC
T ss_pred CCCCCccEEEEEeCCCCCCCCccee
Confidence 5999999999999999999999953
No 50
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=87.17 E-value=6 Score=42.84 Aligned_cols=94 Identities=10% Similarity=-0.026 Sum_probs=67.0
Q ss_pred eEEEeecC--cceEEEEEEEEcCC-CceEEEEeecCC----cceEEEeecEEEEeCCCEEEEEEEEEEecCC-------C
Q 003005 758 SITIARLN--QSRTVQRTLTNIAG-NETYSVGWSAPY----GVSMKVSPTHFSIASGEKQVLNVFFNATTSG-------T 823 (858)
Q Consensus 758 si~~~~~~--~~~~~~~tv~n~~~-~~ty~~~~~~~~----~~~v~~~p~~~tl~~g~s~~~~v~~~~~~~~-------~ 823 (858)
.|.++++. ...+-+.+|+|+|. +.+|.+...... .-.++++|..-+|+||++.+|.|++.+.... .
T Consensus 36 ~idFg~v~~~~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l~Pge~~~i~l~~~v~~~~~~~ln~g~ 115 (366)
T 3qis_A 36 EFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYVSKDSVTILNSGE 115 (366)
T ss_dssp EEEEEEECBTCCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECBCTTTHHHHHHTS
T ss_pred eEEeeeeeeCCeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEECCCCEEEEEEEEEECHHHHHHHhcCc
Confidence 34444433 44566778999999 999988654221 2347889999999999999999999988731 2
Q ss_pred CeEEEEEEEEeCCccEEEEeEEEEEEee
Q 003005 824 AASFGRIGLFGNQGHIVNIPLSVVARLS 851 (858)
Q Consensus 824 ~~~~G~i~~~~~~~~~l~iP~~~~~~~~ 851 (858)
.-.+--+++.=.+|.+.-+|.-+.+..+
T Consensus 116 ~~l~diLvL~ve~G~d~FI~v~~~~~~s 143 (366)
T 3qis_A 116 DKIEDILVLHLDRGKDYFLTISGNYLPS 143 (366)
T ss_dssp SCSCEEEEEEETTSCEEEEEEEEEECCC
T ss_pred cccceEEEEEEeCCCcEEEEeccccCCc
Confidence 2344567777677888888887776643
No 51
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=86.29 E-value=1.4 Score=49.21 Aligned_cols=29 Identities=14% Similarity=0.205 Sum_probs=25.0
Q ss_pred CCccccccccCCCCCCCCCCCcCcCCCcccCCCceEEeeccC
Q 003005 571 APKIMYYSARGPDPEDSFLDDADIMKPNLVAPGNSIWAAWSS 612 (858)
Q Consensus 571 ~~~~a~fSS~GPt~~~~~~~~~g~~KPDI~APG~~I~Sa~~~ 612 (858)
.+.++.||++||.. ||+|||++|+++++.
T Consensus 183 ~~~~~~~S~~g~~v-------------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 183 NLDHAAFSQYTDQV-------------EISGPGEAILSTVTV 211 (441)
T ss_dssp TCCBCTTSCCCTTE-------------EEEEECSSEEEECST
T ss_pred CCCCCccccCCCce-------------EEEeccCCeeccccC
Confidence 45789999999865 999999999999863
No 52
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=83.04 E-value=2.8 Score=46.77 Aligned_cols=79 Identities=11% Similarity=0.095 Sum_probs=51.2
Q ss_pred cccccceEEEEEeccccccC---cchHHHH----HHHHHhCCCeEEEEEECCCCc------C-cccCCCCCCCCeEEecC
Q 003005 461 QDLVQGNLLICSYSIRFVLG---LSTIKQA----FETAKNLSAAGIVFYMDPFVI------G-FQLNPTPMKMPGIIIPS 526 (858)
Q Consensus 461 ~~~~~Gkivl~~~~~~~~~g---~~~~~~~----~~~~~~~Ga~g~i~~n~~~~~------~-~~~~~~~~~ip~~~i~~ 526 (858)
..+++|||||+.++.+.... .+.+..+ ..+|.++||+|+|++|+.... + .........||.+.| +
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~I-s 202 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAI-S 202 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEE-C
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEe-c
Confidence 46899999999884332110 1123333 457999999999999864321 1 111223457899888 7
Q ss_pred hhhHHHHHHHHhcc
Q 003005 527 PDDSKILLQYYNSS 540 (858)
Q Consensus 527 ~~~~~~l~~~~~~~ 540 (858)
.+++..|...+...
T Consensus 203 ~~da~~L~~~l~~g 216 (444)
T 3iib_A 203 NPDADLINAMLKRD 216 (444)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhCC
Confidence 78888888887653
No 53
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=81.54 E-value=1.1 Score=52.99 Aligned_cols=38 Identities=29% Similarity=0.436 Sum_probs=34.3
Q ss_pred ccccceEEEEEeccccccCcchHHHHHHHHHhCCCeEEEEEECC
Q 003005 462 DLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDP 505 (858)
Q Consensus 462 ~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~ 505 (858)
.+++|||+|+.+ |.|.+.+|+.+|+.+||+|+|+|++.
T Consensus 151 ~~v~GkIvlv~~------G~~~~~~Kv~~A~~~GA~gviiy~dp 188 (707)
T 3fed_A 151 INCTGKIVIARY------GKIFRGNKVKNAMLAGAIGIILYSDP 188 (707)
T ss_dssp CCCTTCEEEEEC------CSSCHHHHHHHHHHTTCSEEEEECCH
T ss_pred CCCCCeEEEEEC------CCCCHhHHHHHHHHCCCEEEEEEcCc
Confidence 468999999998 67889999999999999999999863
No 54
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=80.36 E-value=1.2 Score=51.91 Aligned_cols=39 Identities=31% Similarity=0.523 Sum_probs=35.1
Q ss_pred ccccceEEEEEeccccccCcchHHHHHHHHHhCCCeEEEEEECCC
Q 003005 462 DLVQGNLLICSYSIRFVLGLSTIKQAFETAKNLSAAGIVFYMDPF 506 (858)
Q Consensus 462 ~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~ 506 (858)
.+++|||+|+.+ |.|.+..|+.+|..+||+|+|+|++..
T Consensus 128 vdv~GkIvlv~~------g~~~~~~K~~~A~~~GA~gvii~~~~~ 166 (640)
T 3kas_A 128 TPVNGSIVIVRA------GKITFAEKVANAESLNAIGVLIYMDQT 166 (640)
T ss_dssp SCCTTSEEEEES------CSSCHHHHHHHHHTTTCSEEEEECCTT
T ss_pred cccCCcEEEEec------CCCCHHHHHHHHHHCCCeEEEEEeccc
Confidence 478999999998 678899999999999999999999764
No 55
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=73.92 E-value=24 Score=34.90 Aligned_cols=80 Identities=14% Similarity=0.086 Sum_probs=53.5
Q ss_pred ceEEEEEEEEcCC-CceEEEEeecCCcceEEEeecEEEEeCCCEEEEEEEEEEecCC-CCeEEEEEEEEeC---Cc--cE
Q 003005 767 SRTVQRTLTNIAG-NETYSVGWSAPYGVSMKVSPTHFSIASGEKQVLNVFFNATTSG-TAASFGRIGLFGN---QG--HI 839 (858)
Q Consensus 767 ~~~~~~tv~n~~~-~~ty~~~~~~~~~~~v~~~p~~~tl~~g~s~~~~v~~~~~~~~-~~~~~G~i~~~~~---~~--~~ 839 (858)
..+.+.+++|.|+ +.++..... +.- +++.+..-+|+||++.++.|+++..... -....+.|.+... ++ ..
T Consensus 20 ~~~~~~~i~N~g~~pl~i~~~~~-p~~--~~~~~~~~~I~PG~~g~I~vt~~~~~~~~~G~~~~~i~v~~~~~~~~~~~~ 96 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQVAVVSL-PSF--VSLDDRAFRLQAREPRELNLSLAVPRNMPPGMKDEPLVLEVTSPETGKKAV 96 (220)
T ss_dssp CCEEEEEEEECSSSCEEEEEEEC-CTT--EECSCCEEEECSSSCEEEEEEECCCTTCCSEEEEEEEEEEEECTTTCCEEE
T ss_pred cceEEEEEEeCCCCceEEEeccC-CCc--eEeeeCcceeCCCCceEEEEEEcchhcccCCceeeEEEEEEEcCCCCcccc
Confidence 3456778999997 666665432 433 4445667899999999999999877753 2344577888753 12 24
Q ss_pred EEEeEEEEEE
Q 003005 840 VNIPLSVVAR 849 (858)
Q Consensus 840 l~iP~~~~~~ 849 (858)
..||+.+...
T Consensus 97 ~~i~v~g~v~ 106 (220)
T 2qsv_A 97 DSVMVSLPLV 106 (220)
T ss_dssp EEEEEEEEEC
T ss_pred cEEEEEEEEc
Confidence 4777776543
No 56
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=73.41 E-value=15 Score=33.04 Aligned_cols=50 Identities=16% Similarity=0.169 Sum_probs=36.4
Q ss_pred cceEEEEEEEEcCC--CceEEEEeecCCcceEEEeecEEEEeCCCEEEEEEEEEE
Q 003005 766 QSRTVQRTLTNIAG--NETYSVGWSAPYGVSMKVSPTHFSIASGEKQVLNVFFNA 818 (858)
Q Consensus 766 ~~~~~~~tv~n~~~--~~ty~~~~~~~~~~~v~~~p~~~tl~~g~s~~~~v~~~~ 818 (858)
+..+++.+|+|.|. ...|++.+... |-. +....+.|++|++++|+++..+
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyvn-g~~--v~t~~v~La~G~s~tv~f~~~~ 84 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYIN-GTL--YKNWTVSLGPKEEKVLTFNWTP 84 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEET-TEE--EEEEEEEECTTCEEEEEEEECC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEEC-CEE--EeeEEeccCCCCeEEEEEEEEc
Confidence 35678889999998 46777776553 322 2233568999999999998874
No 57
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=62.20 E-value=26 Score=41.44 Aligned_cols=52 Identities=12% Similarity=0.153 Sum_probs=34.2
Q ss_pred eEEEEEEEEcCC-C--ceEEEEeecCCcc------eEEEeecEEEEeCCCEEEEEEEEEEec
Q 003005 768 RTVQRTLTNIAG-N--ETYSVGWSAPYGV------SMKVSPTHFSIASGEKQVLNVFFNATT 820 (858)
Q Consensus 768 ~~~~~tv~n~~~-~--~ty~~~~~~~~~~------~v~~~p~~~tl~~g~s~~~~v~~~~~~ 820 (858)
.+++.+|+|+|+ . +.-.+.+..+.+. .+.-. +++.|+|||+++|+++++..+
T Consensus 615 ~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF-~kv~L~pGes~~V~~~l~~~~ 675 (713)
T 3zyz_A 615 ATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGF-AKLNLTPGQSGTATFNIRRRD 675 (713)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEE-EEEEECTTCEEEEEEEEEGGG
T ss_pred EEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhc-ccceeCCCCeEEEEEEEcHHH
Confidence 467889999998 3 3444444443321 12211 367899999999999998655
No 58
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=61.10 E-value=38 Score=33.48 Aligned_cols=87 Identities=10% Similarity=0.177 Sum_probs=52.0
Q ss_pred CeEEEeecCc-ceEEEEEEEEcCC-CceEEEEeecCCcceEEEeecEEEEeCCCEEEEEEEEEEecCCCC-e--EEEEEE
Q 003005 757 PSITIARLNQ-SRTVQRTLTNIAG-NETYSVGWSAPYGVSMKVSPTHFSIASGEKQVLNVFFNATTSGTA-A--SFGRIG 831 (858)
Q Consensus 757 ~si~~~~~~~-~~~~~~tv~n~~~-~~ty~~~~~~~~~~~v~~~p~~~tl~~g~s~~~~v~~~~~~~~~~-~--~~G~i~ 831 (858)
..+-++.+.+ ..+.+.+++|.|+ +...+ .+...-| -..++...-.++||++.+|.|++++....+. | ....|.
T Consensus 124 ~~~dfG~i~g~~~~~~f~i~N~G~~pL~I~-~v~~scg-ct~~~~~~~~i~PGe~~~i~v~~~~~~~~g~~~~~~~~~i~ 201 (220)
T 2qsv_A 124 TYLDMGQLDGETTKAAIEIRNVGAGPLRLH-SVTTRNP-ALTAVPDRTEIKPGGSTLLRIAVDPQVMKAEGWQSIAADIS 201 (220)
T ss_dssp CEEEEEECTTSCEEEEEEEEECSSSCEEEE-EEEECST-TEEEEESCSEECTTCEEEEEEEECHHHHHHTTCSEEEEEEE
T ss_pred eEEeeeccCCCeEEEEEEEEECCCCCEEEE-EEEeCCC-CEeeecCCccCCCCCEEEEEEEEecCCCCCcccceeccEEE
Confidence 3455565553 3456789999996 44442 2222333 2233344567999999999999987554333 1 557788
Q ss_pred EEeCCc--cEEEEeEE
Q 003005 832 LFGNQG--HIVNIPLS 845 (858)
Q Consensus 832 ~~~~~~--~~l~iP~~ 845 (858)
+..++. +.+.+.+.
T Consensus 202 v~~N~~~~p~~~l~i~ 217 (220)
T 2qsv_A 202 IICNDPQAPLRRIKVK 217 (220)
T ss_dssp EEESCTTCSEEEEEEE
T ss_pred EEECCCCCcEEEEEEE
Confidence 876533 33344443
No 59
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=58.92 E-value=23 Score=41.94 Aligned_cols=68 Identities=21% Similarity=0.246 Sum_probs=41.9
Q ss_pred CCCCCCeEEEeec-----CcceEEEEEEEEcCC---CceEEEEeecCCcc------eEEEeecEE-EEeCCCEEEEEEEE
Q 003005 752 ADLNLPSITIARL-----NQSRTVQRTLTNIAG---NETYSVGWSAPYGV------SMKVSPTHF-SIASGEKQVLNVFF 816 (858)
Q Consensus 752 ~~~n~~si~~~~~-----~~~~~~~~tv~n~~~---~~ty~~~~~~~~~~------~v~~~p~~~-tl~~g~s~~~~v~~ 816 (858)
+-|.|.+|...++ .+..+++.+|+|+|+ .+.-.+.+..+.+. .+.- =+++ .|+|||+++|++++
T Consensus 596 ~GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~g-F~kv~~L~pGes~~V~~~l 674 (721)
T 2x41_A 596 YGLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKA-FHKTRLLNPGESEEVVLEI 674 (721)
T ss_dssp CCBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEE-EEECCCBCTTCEEEEEEEE
T ss_pred CCCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhc-ccccccCCCCCeEEEEEEE
Confidence 3344555544332 234577889999998 44555555444321 1111 1367 89999999999999
Q ss_pred EEec
Q 003005 817 NATT 820 (858)
Q Consensus 817 ~~~~ 820 (858)
+..+
T Consensus 675 ~~~~ 678 (721)
T 2x41_A 675 PVRD 678 (721)
T ss_dssp EGGG
T ss_pred CHHH
Confidence 8654
No 60
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=58.29 E-value=58 Score=28.93 Aligned_cols=69 Identities=7% Similarity=-0.040 Sum_probs=39.7
Q ss_pred cceEEEEEEEEcCC-Cce--------EEEEeecCCcceEE-------E--eecEEEEeCCCEEEEEEEEEEecCCC-CeE
Q 003005 766 QSRTVQRTLTNIAG-NET--------YSVGWSAPYGVSMK-------V--SPTHFSIASGEKQVLNVFFNATTSGT-AAS 826 (858)
Q Consensus 766 ~~~~~~~tv~n~~~-~~t--------y~~~~~~~~~~~v~-------~--~p~~~tl~~g~s~~~~v~~~~~~~~~-~~~ 826 (858)
+...++++|+|.++ ..+ |.+.+....|-.|- + --...+|+||+++++.+++.-+...+ ..+
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl 97 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEV 97 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEE
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEE
Confidence 34567778888886 333 33344433343332 1 12378999999999999997211122 234
Q ss_pred EEEEEEEe
Q 003005 827 FGRIGLFG 834 (858)
Q Consensus 827 ~G~i~~~~ 834 (858)
.+++.-+.
T Consensus 98 ~a~l~~~~ 105 (120)
T 3isy_A 98 KVTFKGRA 105 (120)
T ss_dssp EEEECCEE
T ss_pred EEEEEeee
Confidence 56555554
No 61
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=54.37 E-value=41 Score=40.48 Aligned_cols=67 Identities=19% Similarity=0.276 Sum_probs=41.6
Q ss_pred CCCCCCCCeEEEe--ecC---cceEEEEEEEEcC-C---CceEEEEeecCCc-----c-eEEEeecEEEEeCCCEEEEEE
Q 003005 750 SGADLNLPSITIA--RLN---QSRTVQRTLTNIA-G---NETYSVGWSAPYG-----V-SMKVSPTHFSIASGEKQVLNV 814 (858)
Q Consensus 750 ~~~~~n~~si~~~--~~~---~~~~~~~tv~n~~-~---~~ty~~~~~~~~~-----~-~v~~~p~~~tl~~g~s~~~~v 814 (858)
..+-|.|.+|... ++. +..+++.+|+|+| + .+.-.+.+..+.+ . .+.- =+++.|+|||+++|++
T Consensus 714 FG~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~g-F~kv~L~pGes~~V~~ 792 (845)
T 3abz_A 714 FGYGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKG-FEKVHLEPGEKKTVNI 792 (845)
T ss_dssp TTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEE-EEEEEECTTCEEEEEE
T ss_pred ccCCCcceeEEEecccccccCCeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheecc-ceeEEECCCCEEEEEE
Confidence 3445666666655 432 4467888999999 7 3333343333321 1 1221 1367899999999999
Q ss_pred EEE
Q 003005 815 FFN 817 (858)
Q Consensus 815 ~~~ 817 (858)
+++
T Consensus 793 ~l~ 795 (845)
T 3abz_A 793 DLE 795 (845)
T ss_dssp EEE
T ss_pred EeC
Confidence 998
No 62
>2l04_A Major tail protein V; bacteriophage lambda, phage tail, GPV, IG-like domain, viral; NMR {Enterobacteria phage lambda}
Probab=50.55 E-value=20 Score=30.29 Aligned_cols=28 Identities=29% Similarity=0.487 Sum_probs=24.0
Q ss_pred eEEEeecEEEEeCCCEEEEEEEEEEecC
Q 003005 794 SMKVSPTHFSIASGEKQVLNVFFNATTS 821 (858)
Q Consensus 794 ~v~~~p~~~tl~~g~s~~~~v~~~~~~~ 821 (858)
.|+++|.+++|..|++..+++++.+...
T Consensus 8 ~i~l~~~~~~l~vG~t~~L~atv~P~~A 35 (91)
T 2l04_A 8 GMTVTPASTSVVKGQSTTLTVAFQPEGV 35 (91)
T ss_dssp CEEEECCCEEEETTCEEEEEEEECCSSC
T ss_pred EEEEeCCceEEEcCCEEEEEEEEecccc
Confidence 4778899999999999999999887654
No 63
>3o0l_A Uncharacterized protein; PFAM DUF1425 family member, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.81A {Shewanella loihica}
Probab=48.17 E-value=38 Score=29.68 Aligned_cols=51 Identities=8% Similarity=0.137 Sum_probs=39.4
Q ss_pred cCcceEEEEEEEEcCC---CceEEEEeecCCcceEEE--ee-cEEEEeCCCEEEEEE
Q 003005 764 LNQSRTVQRTLTNIAG---NETYSVGWSAPYGVSMKV--SP-THFSIASGEKQVLNV 814 (858)
Q Consensus 764 ~~~~~~~~~tv~n~~~---~~ty~~~~~~~~~~~v~~--~p-~~~tl~~g~s~~~~v 814 (858)
..+-.+...+|+|... ...|.+.+....|+++.- +| .+++|+++++.+|.-
T Consensus 36 ~~g~l~~~~~l~N~~~~~~~l~Yrf~WyD~~Gl~v~~~~~~W~~l~l~~~~~~~l~~ 92 (112)
T 3o0l_A 36 EAGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDEGVSWKSLKLHGKQQMQVTA 92 (112)
T ss_dssp GGGCEEEEEEEEECSSSCEEEEEEEEEECTTSCBCCCTTCCCEEEEECTTCEEEEEE
T ss_pred cCCeEEEEEEEEeCCCCCEEEEEEEEEECCCCCCcCCCCCCcEEEEECCCCeEEEEE
Confidence 3445567788999987 468889998888987763 25 689999999888765
No 64
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=46.24 E-value=58 Score=29.07 Aligned_cols=48 Identities=19% Similarity=0.236 Sum_probs=39.8
Q ss_pred EEEEEEEEcCC-CceEEEEeecCCcceEEEeecEEEEeCCCEEEEEEEEEE
Q 003005 769 TVQRTLTNIAG-NETYSVGWSAPYGVSMKVSPTHFSIASGEKQVLNVFFNA 818 (858)
Q Consensus 769 ~~~~tv~n~~~-~~ty~~~~~~~~~~~v~~~p~~~tl~~g~s~~~~v~~~~ 818 (858)
+-..+|+|.++ ..-|.+.-.++. ...+.|..=.|.||++..|.|++..
T Consensus 28 ~~~l~l~N~s~~~vaFKVKTT~p~--~y~VrP~~Gii~P~~s~~v~V~~q~ 76 (126)
T 1msp_A 28 TYHIKITNAGGRRIGWAIKTTNMR--RLSVDPPCGVLDPKEKVLMAVSCDT 76 (126)
T ss_dssp CEEEEEEECSSSCEEEEEEESCTT--TEEEESCEEEECTTCEEEEEEEECC
T ss_pred EEEEEEECCCCCeEEEEEEcCCCC--cEEEECCCeEECCCCEEEEEEEecC
Confidence 34568999998 888988876665 5677788889999999999999876
No 65
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=44.68 E-value=64 Score=28.77 Aligned_cols=51 Identities=22% Similarity=0.225 Sum_probs=40.9
Q ss_pred ceEEEEEEEEcCC-CceEEEEeecCCcceEEEeecEEEEeCCCEEEEEEEEEEe
Q 003005 767 SRTVQRTLTNIAG-NETYSVGWSAPYGVSMKVSPTHFSIASGEKQVLNVFFNAT 819 (858)
Q Consensus 767 ~~~~~~tv~n~~~-~~ty~~~~~~~~~~~v~~~p~~~tl~~g~s~~~~v~~~~~ 819 (858)
..+-..+|+|.++ ..-|.+.-.++. ...+.|..=.|.||++..|.|++.+.
T Consensus 28 ~~~~~l~L~N~s~~~vaFKVKTT~p~--~y~VrP~~G~i~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 28 VVTTNLKLQNPSDRKVCFKVKTTAPR--RYCVRPNSGVIDPGSIVTVSVMLQPF 79 (128)
T ss_dssp CEEEEEEEECCSSSCEEEEEEESCGG--GEEEESCEEEECTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCeEEEEEECCCCC--ceEEeCCCcEECCCCeEEEEEEECcC
Confidence 3455679999998 888888766665 56677888889999999999999764
No 66
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=39.36 E-value=74 Score=29.45 Aligned_cols=49 Identities=22% Similarity=0.219 Sum_probs=40.0
Q ss_pred EEEEEEEEcCC-CceEEEEeecCCcceEEEeecEEEEeCCCEEEEEEEEEEe
Q 003005 769 TVQRTLTNIAG-NETYSVGWSAPYGVSMKVSPTHFSIASGEKQVLNVFFNAT 819 (858)
Q Consensus 769 ~~~~tv~n~~~-~~ty~~~~~~~~~~~v~~~p~~~tl~~g~s~~~~v~~~~~ 819 (858)
+-.++|+|.++ ...|.+.-.++. ...+.|..=.|.||++.+|.|++...
T Consensus 38 ~~~l~L~N~s~~~VaFKVKTT~p~--~y~VrP~~GiI~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 38 KTLIVLTNVTKNIVAFKVRTTAPE--KYRVKPSNSSCDPGASIDIIVSPHGG 87 (152)
T ss_dssp CEEEEEEBCSSSCEEEEEEESCTT--TEEEESSEEEECTTCEEEEEEEECSS
T ss_pred EEEEEEEcCCCCeEEEEEECCCCC--ceeecCCCcEECCCCeEEEEEEecCc
Confidence 34578999998 888888766665 56677888899999999999999764
No 67
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=38.94 E-value=72 Score=28.01 Aligned_cols=51 Identities=16% Similarity=0.290 Sum_probs=31.9
Q ss_pred cceEEEEEEEEcCC--CceEEEEeecCCcceEEEeecEE-EEeCCCEEEEEEEEEEe
Q 003005 766 QSRTVQRTLTNIAG--NETYSVGWSAPYGVSMKVSPTHF-SIASGEKQVLNVFFNAT 819 (858)
Q Consensus 766 ~~~~~~~tv~n~~~--~~ty~~~~~~~~~~~v~~~p~~~-tl~~g~s~~~~v~~~~~ 819 (858)
...+++.+|+|.|. ...|++.+... |-. +.-..+ .|++|++.++.++..+.
T Consensus 19 ~~~ti~atVkN~G~~~a~~~~V~ly~~-g~~--v~t~~v~~LaaG~s~tv~~~w~~~ 72 (114)
T 2l0d_A 19 TVNTMTATIENQGNKDSTSFNVSLLVD-GIV--VDTQTVTSLESENSTNVDFHWTLD 72 (114)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEEET-TEE--EEEEEESCBCBTCEEEEEEEEECC
T ss_pred CeEEEEEEEEECCCCCCCCEEEEEEEC-CEE--EcceecccccCCCEEEEEEEEeec
Confidence 34577889999997 45566665533 322 222234 46788888877776654
No 68
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=38.55 E-value=1.2e+02 Score=26.78 Aligned_cols=50 Identities=14% Similarity=0.081 Sum_probs=39.6
Q ss_pred EEEEEEEEcCC-CceEEEEeecCCcceEEEeecEEEEeCCCEEEEEEEEEEec
Q 003005 769 TVQRTLTNIAG-NETYSVGWSAPYGVSMKVSPTHFSIASGEKQVLNVFFNATT 820 (858)
Q Consensus 769 ~~~~tv~n~~~-~~ty~~~~~~~~~~~v~~~p~~~tl~~g~s~~~~v~~~~~~ 820 (858)
+.+.+|+|.++ ...|.+.-+.+. ...|.|..=.|.||++.+|.|+..+..
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~--~YrVrP~~G~I~Pg~~~~I~I~~q~~~ 76 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNE--HYRVRPVYGFVDAKGKSKLDINRLPGP 76 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTT--TEEEECSEEEECTTCEEEEEEEECSCC
T ss_pred EEEEEEECCCCCeEEEEEEecCCC--ceEEcCCceEECCCCeEEEEEEeCCCC
Confidence 44678999998 788887766554 566778888899999999999998643
No 69
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=35.45 E-value=22 Score=27.37 Aligned_cols=37 Identities=19% Similarity=0.139 Sum_probs=27.4
Q ss_pred CchhHHHHHHHHHHHHhCCCCCHHHHHHHHHcccccc
Q 003005 632 SMAAPHIAGLAALIKQKFPSFSPSAIASALSTSATLY 668 (858)
Q Consensus 632 SMAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~ 668 (858)
|-..|..--.+..|++.||+++...|+.+|...-..+
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~gdv 39 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNK 39 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTCH
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCCCH
Confidence 3333444456778999999999999999998765443
No 70
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=34.04 E-value=1.2e+02 Score=26.36 Aligned_cols=48 Identities=10% Similarity=0.090 Sum_probs=38.9
Q ss_pred EEEEEEEcCC-CceEEEEeecCCcceEEEeecEEEEeCCCEEEEEEEEEEe
Q 003005 770 VQRTLTNIAG-NETYSVGWSAPYGVSMKVSPTHFSIASGEKQVLNVFFNAT 819 (858)
Q Consensus 770 ~~~tv~n~~~-~~ty~~~~~~~~~~~v~~~p~~~tl~~g~s~~~~v~~~~~ 819 (858)
-+.+|+|.++ ...|.+.-+.+. ...+.|..=.+.||++.+|.|+....
T Consensus 19 ~~l~L~N~t~~~vaFKVKtT~p~--~y~VrP~~G~I~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 19 STHKLVNGGAEKIVFKIKSSNNN--EYRIAPVFGFVDPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEECSSSCEEEEEEESCSS--SEEEECSEEEECTTEEEEEEEEECSC
T ss_pred EEEEEEcCCCCeEEEEEEeCCCC--ceEEcCCceEECCCCeEEEEEEeCCC
Confidence 3568999998 888888766555 56677888889999999999998764
No 71
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=33.48 E-value=86 Score=28.76 Aligned_cols=49 Identities=22% Similarity=0.249 Sum_probs=39.7
Q ss_pred EEEEEEEEcCC-CceEEEEeecCCcceEEEeecEEEEeCCCEEEEEEEEEEe
Q 003005 769 TVQRTLTNIAG-NETYSVGWSAPYGVSMKVSPTHFSIASGEKQVLNVFFNAT 819 (858)
Q Consensus 769 ~~~~tv~n~~~-~~ty~~~~~~~~~~~v~~~p~~~tl~~g~s~~~~v~~~~~ 819 (858)
+-.++|+|.++ ..-|.+.-.++. ...+.|..=.|.||++..|.|++.+.
T Consensus 34 ~~~l~L~N~s~~~VaFKVKTT~p~--~y~VrP~~GiI~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 34 TTNLKLQNPSDRKVCFKVKTTAPR--RYCVRPNSGIIDPGSIVTVSVMLQPF 83 (147)
T ss_dssp CEEEEEECCSSSCEEEEEEESCTT--SEEEESSEEECCTTCEEEEEEEECCC
T ss_pred EEEEEEECCCCCcEEEEEECCCCc--cEEEcCCCcEECCCCeEEEEEEECCC
Confidence 34578999998 888888776665 46677888889999999999999864
No 72
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=25.45 E-value=51 Score=30.69 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=26.6
Q ss_pred ecccCchhHHHHHHHHHHHHhCCCCCHHHHHHH
Q 003005 628 MSGTSMAAPHIAGLAALIKQKFPSFSPSAIASA 660 (858)
Q Consensus 628 ~sGTSMAaP~VAG~aALl~q~~P~lsp~~ik~~ 660 (858)
+.|-| =|+.|-|++|||++.+-..+|+||.+.
T Consensus 79 F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 79 FFGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp CEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred EeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 34545 479999999999999999999998653
No 73
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=23.46 E-value=3.7e+02 Score=30.33 Aligned_cols=77 Identities=17% Similarity=0.159 Sum_probs=47.6
Q ss_pred CCeEEEeecCcceEEEEEEEEcCC-C---ceEEEEeecCCcceEEEeecEEEEeCCCEEEEEEEEEEecCCC-CeEEEEE
Q 003005 756 LPSITIARLNQSRTVQRTLTNIAG-N---ETYSVGWSAPYGVSMKVSPTHFSIASGEKQVLNVFFNATTSGT-AASFGRI 830 (858)
Q Consensus 756 ~~si~~~~~~~~~~~~~tv~n~~~-~---~ty~~~~~~~~~~~v~~~p~~~tl~~g~s~~~~v~~~~~~~~~-~~~~G~i 830 (858)
.|.+++.. .++.+++.+|+|... . ..++ +..+.+.+++. ....++||++.+++|+++++.... ..|.=-+
T Consensus 364 ~~~~~~~~-g~~~~~~~~vtn~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~g~~~t~~~~vt~~~~~~~g~y~l~~ 438 (601)
T 1w8o_A 364 IPDVALEP-GQQVTVPVAVTNQSGIAVPKPSLQ--LDASPDWQVQG--SVEPLMPGRQAKGQVTITVPAGTTPGRYRVGA 438 (601)
T ss_dssp CCCEEECT-TCEEEEEEEEECCSSSCBSSCEEE--EECCTTSEEEE--EECCBCTTCEEEEEEEEECCTTCCCEEEEEEE
T ss_pred CccceecC-CceeEEEEEEECCCceeccCceEE--EecCCCcEEec--cccccCCCCceEEEEEEecCCCCCCCcEEeeE
Confidence 45555532 245677888898654 2 2444 44566666655 357788999999999999987532 2333334
Q ss_pred EEEeCCc
Q 003005 831 GLFGNQG 837 (858)
Q Consensus 831 ~~~~~~~ 837 (858)
.+...++
T Consensus 439 ~~~~~~~ 445 (601)
T 1w8o_A 439 TLRTSAG 445 (601)
T ss_dssp EEEETTE
T ss_pred EEEecCc
Confidence 5554333
No 74
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=21.70 E-value=49 Score=30.30 Aligned_cols=33 Identities=21% Similarity=0.337 Sum_probs=27.7
Q ss_pred eeecccCchhHHHHHHHHHHHHhCCCCCHHHHHH
Q 003005 626 AMMSGTSMAAPHIAGLAALIKQKFPSFSPSAIAS 659 (858)
Q Consensus 626 ~~~sGTSMAaP~VAG~aALl~q~~P~lsp~~ik~ 659 (858)
..+.|-| =|+.|-|++|||++.+-..+|+||.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4455666 47999999999999999999999864
No 75
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=20.90 E-value=1.2e+02 Score=26.92 Aligned_cols=42 Identities=12% Similarity=0.264 Sum_probs=25.9
Q ss_pred EEEEEcCC-C---ceEEEEeecCC--cceEEEeecEEEEeCCCEEEEEE
Q 003005 772 RTLTNIAG-N---ETYSVGWSAPY--GVSMKVSPTHFSIASGEKQVLNV 814 (858)
Q Consensus 772 ~tv~n~~~-~---~ty~~~~~~~~--~~~v~~~p~~~tl~~g~s~~~~v 814 (858)
++|+|.+. . .-|.+.-.... ....+| |..++|+||++.+|.-
T Consensus 21 V~l~N~s~~~~~L~gW~l~r~v~~~~~~~y~F-p~~~~L~pg~~vtIws 68 (121)
T 1ifr_A 21 VRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRF-PPKFTLKAGQVVTIWA 68 (121)
T ss_dssp EEEEECSSSCEECTTCEEEEEETTSCCEEEEC-CSSCEECTTCEEEEEE
T ss_pred EEEEeCCCCccccCCCEEEEEcCCCccEEEEe-CCCcEECCCCEEEEEe
Confidence 46778775 2 24455443322 245665 7789999999866553
Done!