BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003009
(858 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6ZI17|OML2_ORYSJ Protein MEI2-like 2 OS=Oryza sativa subsp. japonica GN=ML2 PE=2
SV=1
Length = 848
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/822 (60%), Positives = 593/822 (72%), Gaps = 41/822 (4%)
Query: 42 DASLFSSSLPVLPHEKLNLNAMGLGRQSVDDISSGLSKVHHGVASDDPLEGVMNPAIGNS 101
+ASLFS+SLPVLPHEK+N G +DD S+ L ++ D I +
Sbjct: 47 NASLFSTSLPVLPHEKINFLDSARGTPLMDDASAKLKELDDDPEGKDYKFDFDLRQIDDL 106
Query: 102 LPDDEDELLAGIMDDFDLRGLPSSLEDLEDYDIFGSGGGMELEGEPQESLSMSMSKISIS 161
LP+ ED+L AGI ++ + G +S+E+LE++D+FGSGGGMEL+ +P ES++ + SI+
Sbjct: 107 LPN-EDDLFAGITNEIEPAGQTNSMEELEEFDVFGSGGGMELDTDPVESITAGLGNTSIA 165
Query: 162 DSASGNGLLHYSVPNGAGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRT 221
D GNG+ H+ N A TVAGEHPYGEHPSRTLFVRNINSNV+D+ELR+LFEQYGDIRT
Sbjct: 166 DGLRGNGVNHFGPSNSASTVAGEHPYGEHPSRTLFVRNINSNVDDTELRSLFEQYGDIRT 225
Query: 222 LYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLV 281
LYTA KHRGFVMISY+DIRAAR AMR LQNKPLRRRKLDIHFSIPK+NPSDKDLNQGTLV
Sbjct: 226 LYTATKHRGFVMISYFDIRAARGAMRGLQNKPLRRRKLDIHFSIPKENPSDKDLNQGTLV 285
Query: 282 VFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAG 341
+FNLDPSVSNE++RQIFG YGEVKEIRETP+K+HHKFIEFYDVRAAEAAL+SLN+S+IAG
Sbjct: 286 IFNLDPSVSNEEVRQIFGTYGEVKEIRETPNKKHHKFIEFYDVRAAEAALRSLNKSEIAG 345
Query: 342 KRIKLEPSRPGGARRNLMLQLNQELEQDESRILQ-HQVGSPITNSPPGNWVQFSSPIEHN 400
KRIKLEPSRPGG RRNLM QL +++QDE R + VGSPI +SPPG W Q+SSP ++N
Sbjct: 346 KRIKLEPSRPGGTRRNLMQQLGHDIDQDEPRSYRIPHVGSPIASSPPGAWAQYSSPTDNN 405
Query: 401 PLQTISKSPNFRNMSPTTSNHMPGLASILHPQVSTLEKIAPIGKDQGRGSLMEHALTNTI 460
LQ + SP MSP G+ L +S KIAPIGKD S + +N
Sbjct: 406 LLQAFNASPTGNGMSPI------GMPPSL---ISNAVKIAPIGKDS-NWSKYDKVFSNNN 455
Query: 461 SANGASFQQSNSFSEPKIGLYRGTVSSFGPSPSNGSGVETLSGPQFLWGSPSRYSEHSSS 520
+GA+FQ S+S+ + K S S TL+GP+FLWGSP YSEH+ S
Sbjct: 456 QPHGAAFQHSHSYQDHK-------------SEHMSSSPGTLTGPEFLWGSPKPYSEHAQS 502
Query: 521 PAWQTSSMGHPFSSNGKI--HGLPYSGRQGSFLGSS---QHHHVGSAPSGVPLERRFGFL 575
P W+ ++GH SN + GL Y GRQ S GS HHHVGSAPSG P E FGFL
Sbjct: 503 PIWRPPAIGHAIPSNTRSQGQGLLYGGRQASLFGSQDQLHHHHVGSAPSGAPFESHFGFL 562
Query: 576 PESPETSFMNPVAF---CGMGIGQNDGSFMVNMGSRASVNPGITVPRNLSDNG-SSFRVM 631
PESPETS+MN V F +G G+N M+NM +RASVNP + N+SDN SSFR +
Sbjct: 563 PESPETSYMNQVRFGNIGNIGSGRNGTGLMLNMAARASVNPVSALSGNMSDNNSSSFRPI 622
Query: 632 SSPRLSPVFLGNGPYPGLTPANIEGLYERGRSRRIENNNGNQLDSKKQFQLELEKIRSGE 691
SPRL F GN Y G ++ ERGR+RR++++ Q DSKKQ+QL+LEKIR G+
Sbjct: 623 LSPRLGQSFYGNPTYQGPGSFGLDNSIERGRNRRVDSSVF-QADSKKQYQLDLEKIRKGD 681
Query: 692 DTRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLPIDFKNKCNVGYAFINMLSPLHI 751
DTRTTLMIKNIPNKYTSKMLLAAIDE HKGTYDF YLPIDFKNKCNVGYAFINM+SP+HI
Sbjct: 682 DTRTTLMIKNIPNKYTSKMLLAAIDEFHKGTYDFFYLPIDFKNKCNVGYAFINMISPVHI 741
Query: 752 IPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHFQNSSLMNEDKRCRPILFHSEGP 811
+ FY+AFNGKKWEKFNSEKVASLAYARIQGR AL++HFQNSSLMNEDKRCRPILFHS GP
Sbjct: 742 VSFYQAFNGKKWEKFNSEKVASLAYARIQGRTALISHFQNSSLMNEDKRCRPILFHSNGP 801
Query: 812 EAGDQVTQEQLNSNSVNFQVCPSNGSHLRDASGSPIADDEGN 853
+AG+ QE N + + +G+ A+G P ++E N
Sbjct: 802 DAGN---QEPFPINGICIHMPLEDGA---IATGDPFGNEEDN 837
>sp|Q8VWF5|AML5_ARATH Protein MEI2-like 5 OS=Arabidopsis thaliana GN=ML5 PE=1 SV=1
Length = 800
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/816 (61%), Positives = 614/816 (75%), Gaps = 47/816 (5%)
Query: 17 LNIPKEVGGGSCGRIAG-SDSYLASDDASLFSSSLPVLPHEKLNLNAMGLGRQSVDDISS 75
++IP E G+ G + G + S DA+LFSSSLPV P KL L+ G +DD +
Sbjct: 1 MDIPHEAEAGAWGILPGFGRHHHPSSDATLFSSSLPVFPRGKLQLSDNRDGFSLIDD--T 58
Query: 76 GLSKVHHGVASDDPLEGVMNPAIGNSLPDDEDELLAGIMDDFDLRGLPSSLEDLEDYDIF 135
+S+ + S D E + +IGN LPD+ED LL G+MDD DL LP D +DYD+F
Sbjct: 59 AVSRTNKFNESADDFE---SHSIGNLLPDEED-LLTGMMDDLDLGELP----DADDYDLF 110
Query: 136 GSGGGMELEGEPQESLSMSMS-KISISDSASGNGLLHYSVPNGAGTVAGEHPYGEHPSRT 194
GSGGGMEL+ + +++LSMS ++S+S S GN + +++PNGAGTVAGEHPYGEHPSRT
Sbjct: 111 GSGGGMELDADFRDNLSMSGPPRLSLS-SLGGNAIPQFNIPNGAGTVAGEHPYGEHPSRT 169
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 254
LFVRNINSNVEDSEL ALFEQYGDIRTLYT CKHRGFVMISYYDIR+AR AMR+LQNKPL
Sbjct: 170 LFVRNINSNVEDSELTALFEQYGDIRTLYTTCKHRGFVMISYYDIRSARMAMRSLQNKPL 229
Query: 255 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 314
RRRKLDIHFSIPKDNPS+KD+NQGTLVVFNLDPS+SN+DL IFGA+GE+KEIRETPHKR
Sbjct: 230 RRRKLDIHFSIPKDNPSEKDMNQGTLVVFNLDPSISNDDLHGIFGAHGEIKEIRETPHKR 289
Query: 315 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQELEQDESRIL 374
HHKF+EFYDVR AEAALK+LNR +IAGKRIK+EPSRPGGARR+LMLQLNQ+LE D+ L
Sbjct: 290 HHKFVEFYDVRGAEAALKALNRCEIAGKRIKVEPSRPGGARRSLMLQLNQDLENDDLHYL 349
Query: 375 QHQVGSPITNSPP--GNWVQFSSPIEHNPLQTI-SKSPNFRNMSPTTSNHMPGLASILHP 431
+GSP+ NSPP GNW +SP+E +PLQ++ S+SP F +SPT + H+ GLAS L+
Sbjct: 350 P-MIGSPMANSPPMQGNW-PLNSPVEGSPLQSVLSRSPVF-GLSPTRNGHLSGLASALNS 406
Query: 432 QVSTLEKIAPIGKDQGRGSLMEHALTNTISANGASFQQSNS-FSEPKI-GLYRGTVSSFG 489
Q + K+APIG+ Q I +NG FQQS+ F EPK+ Y G +S G
Sbjct: 407 QGPS-SKLAPIGRGQ-------------IGSNG--FQQSSHLFQEPKMDNKYTGNLSPSG 450
Query: 490 PSPSNGSGVETLSGPQFLWGSPSRYSEHSSSPAWQTSSMGHPFSSNGKIHGLPYSGRQGS 549
P SNG G+ETLSG +FLWGSP+ SE SSS W TSS G+P S +P+ + +
Sbjct: 451 PLISNGGGIETLSGSEFLWGSPNARSEPSSSSVWSTSSTGNPLFSTRVDRSVPFPHQHQN 510
Query: 550 FLGSSQHHHVGSAPSGVPLERRFGFLPESPETS-FMNPVAFCGM-GIGQNDGSFMVNMGS 607
S H HVGSAPSGVPLE+ FGF+PES + + FMN V GM G+G N GSF M +
Sbjct: 511 QSRSHHHFHVGSAPSGVPLEKHFGFVPESSKDALFMNTVGLQGMSGMGLNGGSFSSKMAN 570
Query: 608 RASVNPGITVPRNLSDNG-SSFRVMSSPRLSPVFLGNGPYPGLTPANIEGLYERGRSRRI 666
+N G ++++NG SS+R+MSSPR SP+FL +G PG + + LYE GR RR+
Sbjct: 571 NGIINSG-----SMAENGFSSYRMMSSPRFSPMFLSSGLNPGRFASGFDSLYENGRPRRV 625
Query: 667 ENNNGNQLDSKKQFQLELEKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFL 726
ENN+ NQ++S+KQFQL+LEKI +GED+RTTLMIKNIPNKYTSKMLLAAIDE ++GTY+FL
Sbjct: 626 ENNS-NQVESRKQFQLDLEKILNGEDSRTTLMIKNIPNKYTSKMLLAAIDEKNQGTYNFL 684
Query: 727 YLPIDFKNKCNVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALV 786
YLPIDFKNKCNVGYAFINML+P IIPFYEAFNGKKWEKFNSEKVASLAYARIQG++AL+
Sbjct: 685 YLPIDFKNKCNVGYAFINMLNPELIIPFYEAFNGKKWEKFNSEKVASLAYARIQGKSALI 744
Query: 787 AHFQNSSLMNEDKRCRPILFHS-EGPEAGDQVTQEQ 821
AHFQNSSLMNED RCRPI+F + PE+ +QV E+
Sbjct: 745 AHFQNSSLMNEDMRCRPIIFDTPNNPESVEQVVDEE 780
>sp|Q9SVV9|AML3_ARATH Protein MEI2-like 3 OS=Arabidopsis thaliana GN=ML3 PE=2 SV=2
Length = 759
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/811 (57%), Positives = 568/811 (70%), Gaps = 82/811 (10%)
Query: 17 LNIPKEVGGGSCGRIAGSDSYLASDDASLFSSSLPVLPHEKLNLNAMGLGRQSVDDISSG 76
+NIP G + SD + AS DASLFSSSLP++ H+ N+N QSVD+++SG
Sbjct: 1 MNIP-------SGTFSRSDHFHASSDASLFSSSLPLIQHQ--NINPRDSYHQSVDEMASG 51
Query: 77 LSKVHHGVAS--DDPLEGVMNPAIGNSLPDDEDELLAGIMDDFDLRGLPSSLEDLEDYDI 134
L G+ + DD G +P IGN LPDDE+EL +G+MDD +L LP++L+DLEDYD+
Sbjct: 52 LDHFSGGIGNMLDD---GDSHP-IGNMLPDDEEELFSGLMDDLNLSSLPATLDDLEDYDL 107
Query: 135 FGSGGGMELEGEPQESLSMSMSKISISDSASGNGLLHYSVPNGAGTVAGEHPYGEHPSRT 194
FGSGGG+ELE +P +SL+ S++ +DS N + NG G++AGEHPYGEHPSRT
Sbjct: 108 FGSGGGLELETDPYDSLNKGFSRMGFADSNVDNVMPQNIFQNGVGSIAGEHPYGEHPSRT 167
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 254
LFVRNINSNVEDSEL+ALFEQYG IRTLYTACK RGFVM+SY DIRA+R AMRALQ K L
Sbjct: 168 LFVRNINSNVEDSELQALFEQYGHIRTLYTACKQRGFVMVSYNDIRASRAAMRALQGKLL 227
Query: 255 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 314
++RKLDIHFSIPKDNPS+KD+NQGTLVVFNL PSVSN DL IFG YGE+KEIRETP+KR
Sbjct: 228 KKRKLDIHFSIPKDNPSEKDVNQGTLVVFNLAPSVSNRDLENIFGVYGEIKEIRETPNKR 287
Query: 315 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQELEQDESRIL 374
HHKF+EF+DVR+A+AALK+LNR++IAGKRIKLE SRPGGARRN+MLQ+N ELEQD+S
Sbjct: 288 HHKFVEFFDVRSADAALKALNRTEIAGKRIKLEHSRPGGARRNMMLQMNPELEQDDSYSY 347
Query: 375 QHQVGSPITNSPPGNWVQFSSPIEHNPLQTISKSPNFRNMSPTTSNHMPGLASILHPQVS 434
+ V SP+ +SP GNW +SPI+H PLQ+ SKSP F N+SPT +I +P+ S
Sbjct: 348 LNHVESPLASSPIGNWR--NSPIDH-PLQSFSKSPIFGNLSPTK--------NIRYPEFS 396
Query: 435 TLEKIAPIGKDQG--RGSLMEHALTNTISANGASFQQSNSFSEPKIGLYRGTVSSFGPSP 492
K A + DQ R S ++H +++ S N AS + S +F +P+ + S P
Sbjct: 397 M--KTASVNNDQEGRRFSHLDHLFSSS-SYNNASHKAS-TFQQPQSFGSVSSFGSLNSHP 452
Query: 493 SNGSGVETLSGPQFLWGSPSRYSEHSSSPAWQTSSMGHPFSSNGKIHGLPYSGRQGSFLG 552
S+ VETLSG +FLWGSP SS AW + PFSSN + H PYS + GS
Sbjct: 453 SH---VETLSGSEFLWGSP-------SSSAWPVN----PFSSNRENHRFPYSAQNGSL-- 496
Query: 553 SSQHHHVGSAPSGVPLERRFGFLPESPETSFMNPVAFCGMGIGQNDGSFMVNMGSRASVN 612
Q HH+GSAPS GF P SPETS M VAF G AS N
Sbjct: 497 -HQLHHIGSAPS--------GFFPRSPETSSMGSVAFRG-----------------ASGN 530
Query: 613 PGITVPRNLSDNGS-SFRVMSSPRLSPVFLGNGPY--PGLTPANIEGLYERGRSRRIENN 669
+ RNL + S +F+++S+PR S +F GNG Y P T +I+ E G +++ + +
Sbjct: 531 --MNAQRNLRETSSPNFKMLSAPRRSQLFTGNGSYLWPAATMVSIDDPLEDGSNQQFD-S 587
Query: 670 NGNQLDSKKQFQLELEKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLP 729
NGNQ D K QFQL+L KI GED RTTLMIKNIPNKYT MLLAAIDE + GTYDFLYLP
Sbjct: 588 NGNQADIKIQFQLDLSKIMRGEDPRTTLMIKNIPNKYTRNMLLAAIDEKNSGTYDFLYLP 647
Query: 730 IDFKNKCNVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHF 789
IDFKNKCNVGYAFINM+SP I YEAFNGKKW+KFNSEKVASLAYARIQG+AAL+AHF
Sbjct: 648 IDFKNKCNVGYAFINMVSPKFTIALYEAFNGKKWDKFNSEKVASLAYARIQGKAALIAHF 707
Query: 790 QNSSLMNEDKRCRPILFHSEGPEAGDQVTQE 820
QNSSLMNED+RC+PI+F +G E+ + +E
Sbjct: 708 QNSSLMNEDRRCQPIVF--DGSESKYPIIRE 736
>sp|Q6EQX3|OML5_ORYSJ Protein MEI2-like 5 OS=Oryza sativa subsp. japonica GN=ML5 PE=2
SV=1
Length = 811
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/832 (51%), Positives = 536/832 (64%), Gaps = 67/832 (8%)
Query: 1 MKQFFDH--SSGPPKIP-----QLNIPKEVGGGSCGRIAGSDSYLASDDASLFSSSLP-V 52
M+Q DH SS P IP Q+ GG S + GS DA LFSSSLP V
Sbjct: 1 MEQREDHTKSSEPAFIPSKRTHQMRNIWAWGGPSSTTVNGSS------DAVLFSSSLPSV 54
Query: 53 LPHEKLNLNAMGLGRQSVDDISSGLSKVHHGVASDDPLEGVMNPAIGNSLPDDEDELLAG 112
L KL Q DD+ + + DP++ V IGN LPDDE ELLAG
Sbjct: 55 LQFGKLPGKEREYNAQPKDDMFPMMKQPGTNARVADPMDDVAQHLIGNLLPDDE-ELLAG 113
Query: 113 IMDDFDLRGLPSSLEDLEDYDIFGSGGGMELEGEPQESLSMSMSKISISDSASGNGLLHY 172
+++DFD L + +E+ E+YD+F + GGMEL+ +P ES++ +K S+ + +G+ Y
Sbjct: 114 VIEDFDHVKLRTQVEESEEYDVFRNSGGMELDIDPLESITFGTAKASLVN-GTGSSTNQY 172
Query: 173 SVPNGAGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFV 232
S+ NGAGTV GEHPYGEHPSRTLFVRNINSNVEDSELR+LFE +GDIR++YTA KHRGFV
Sbjct: 173 SIQNGAGTVTGEHPYGEHPSRTLFVRNINSNVEDSELRSLFEPFGDIRSMYTATKHRGFV 232
Query: 233 MISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNE 292
MISYYDIR AR A ALQ+KPLRRRKLDIH+SIPK+NPSDKD+NQGTLV+FNL+P+VSNE
Sbjct: 233 MISYYDIRHARNAKTALQSKPLRRRKLDIHYSIPKENPSDKDMNQGTLVIFNLEPAVSNE 292
Query: 293 DLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPG 352
+L QIFGA+GEV+EIRETPHKRHH+FIEFYDVRAAE+AL+SLN+SDIAGKR+KLEPSRPG
Sbjct: 293 ELLQIFGAFGEVREIRETPHKRHHRFIEFYDVRAAESALRSLNKSDIAGKRVKLEPSRPG 352
Query: 353 GARRNLMLQLNQELEQDESRILQHQVGSPITNSPPGNWVQFSSPIEHNPLQTISKSPNFR 412
GARR+ + N E EQDE++ Q+GSP NSPP W Q SP + N L ++++
Sbjct: 353 GARRSFIQHFNHEFEQDETKHNSFQIGSPSANSPPSLWSQLGSPTDENKLNALNETAFNG 412
Query: 413 NMSPTTSNHMPGLASILHPQVSTLEKIAPIGKDQGRGSLMEHALTNTISANGASFQQSNS 472
MSP SNH+ G +S P S P+GK S + + I + S+S
Sbjct: 413 GMSPLGSNHLSGFSSGYPPMKS------PVGK-----SSYWNNRADNIFHGSPTLHNSHS 461
Query: 473 FSEPKIGLYRGTVSSFGPSPSNGS--GVETLSGPQFLWGSPSRYSEHSSSPAWQTSSMGH 530
F E G+ + + S + G L+G FLWG+ + +H + Q+ ++ +
Sbjct: 462 FPEHHGGIISASPLVSSAASSASTASGFTALTGTSFLWGNNNNLRDHGQPSSIQSQALSN 521
Query: 531 PFSSNGKIHGLP--YSGRQGSFLGSSQHH---HVGSAPSGVPLERRFGFLPESPETSFMN 585
N + Y +GSF G+S+H +VGSAPS P E FG+ +SP+TS+M
Sbjct: 522 SLFPNNQPQRQSNLYQNLRGSF-GASEHFSQFNVGSAPSVFPFESNFGYFSDSPDTSYMR 580
Query: 586 PVAFCGMGIGQNDGSFMVNMGSRASVNPGITVPRNLSDNGSSFRVMSSPRLSPVFLGNGP 645
F G G + GS M N G+ PR++ + NG
Sbjct: 581 QGKFGGTGPTRVSGSLMTNFGAY-------------------------PRINVASMQNGS 615
Query: 646 YPGLTPANIEGLYERGRSRRIENNNGNQLDSKKQFQLELEKIRSGEDTRTTLMIKNIPNK 705
EGL +RGR++ + N+G Q DS+ Q+QL+LEKI +G+DTRTTLMIKNIPNK
Sbjct: 616 ------VGFEGLLDRGRNQTV-GNSGCQEDSRVQYQLDLEKIIAGKDTRTTLMIKNIPNK 668
Query: 706 YTSKMLLAAIDENHKGTYDFLYLPIDFKNKCNVGYAFINMLSPLHIIPFYEAFNGKKWEK 765
YTS MLL IDE H+GTYDF YLPIDFKNKCNVGYAFINM SP +I+ F++AF G+KWEK
Sbjct: 669 YTSNMLLEVIDETHEGTYDFFYLPIDFKNKCNVGYAFINMASPGYIVSFFKAFAGRKWEK 728
Query: 766 FNSEKVASLAYARIQGRAALVAHFQNSSLMNEDKRCRPILFHSEGPEAGDQV 817
FNSEKV SLAYARIQG+AALV HFQNSSLMNEDKRCRP+LF + E +Q+
Sbjct: 729 FNSEKVVSLAYARIQGKAALVNHFQNSSLMNEDKRCRPMLFDPKHTENNNQI 780
>sp|Q9SJG8|AML2_ARATH Protein MEI2-like 2 OS=Arabidopsis thaliana GN=ML2 PE=2 SV=2
Length = 843
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/803 (47%), Positives = 507/803 (63%), Gaps = 35/803 (4%)
Query: 50 LPVLPHEKLNLNAMGLGRQSVDDISSGLSKVHHGVASDDPLEGVMNPAIGNSLPDDEDEL 109
LP L HEKLN+ S D+ S L+K+ G + D LE V A+ LP+DE+EL
Sbjct: 56 LPTLFHEKLNMTDSD-SWLSFDESSPNLNKLVIGNSEKDSLEDVEPDALEILLPEDENEL 114
Query: 110 LAGIMDDFDLRGLPSSLEDLEDYDIFGSGGGMELEGEPQESLSMSMSKISISDSASGNGL 169
L G++D+ + GLP L+DLE+ D+F +GGGMEL+ E Q++ ++ S + ISD + N
Sbjct: 115 LPGLIDELNFTGLPDELDDLEECDVFCTGGGMELDVESQDNHAVDASGMQISDRGAANAF 174
Query: 170 LHYSVPNGAGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHR 229
+ PN AG V+ EHP GEHPSRTLFVRNINS+VEDSEL ALFE +G+IR+LYTACK R
Sbjct: 175 VPRKRPNTAGRVSVEHPNGEHPSRTLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSR 234
Query: 230 GFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSV 289
GFVMISYYDIRAA AMRALQN LR+R LDIHFSIPK+NPS+KD+NQGTLV+FN+D +V
Sbjct: 235 GFVMISYYDIRAAHAAMRALQNTLLRKRTLDIHFSIPKENPSEKDMNQGTLVIFNVDTTV 294
Query: 290 SNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349
SN++L Q+FGAYGE++EIRETP++R H+FIE+YDVR AE ALK+LNRS+I GK IKLE S
Sbjct: 295 SNDELLQLFGAYGEIREIRETPNRRFHRFIEYYDVRDAETALKALNRSEIGGKCIKLELS 354
Query: 350 RPGGARRNLMLQLNQELEQDESRILQHQVGSPITNSPPGNWVQFSSPIEHNPLQTISKSP 409
RPGGARR + +Q+LE+ E +QVGS + NSPPGNW SP++ +P ++
Sbjct: 355 RPGGARRLSVPSQSQDLERTEVTNFYNQVGSHVANSPPGNW-PIGSPVKGSPSHAFTRPH 413
Query: 410 NFRNMSPTTSNHMPGLASILHPQVSTLEKIAPIGKDQGRGSLMEHALTNTISANGASFQQ 469
+ P S++MPGLASIL S+ +P+ DQG + + N + S+ Q
Sbjct: 414 GLGMVRPVNSDNMPGLASILPAHPSSFHGFSPVSNDQGLLNHSNQTILNKGLMHNISYGQ 473
Query: 470 SNSFSEPKIGLYRGTVSSFGPSPSNGSGVETLSGPQFLWGSPSRYSEHSSSPAWQ----- 524
+S E G ++ P + SG T S ++ WGSP +H + P +
Sbjct: 474 PHSLPEHITGGISNSMRFIAP---HSSGFGTSSDHRYRWGSP---PQHMNYPGYTGVSSS 527
Query: 525 TSSMGHPFSSNGKIHGLPYSGRQGSFLGSSQHHHVGSAPSGVPLERRFGFLPESPETSFM 584
+SS PF+ HG P++ RQ S LG Q HHVGSAPS + + SPE
Sbjct: 528 SSSTERPFTVR---HGFPFAERQASLLGKYQ-HHVGSAPSSIHFNTQMNCYTGSPEI--- 580
Query: 585 NPVAFCGMGIGQNDGSFMVNMGSRASVNPGITVPRNLSDNGSSFRVMSSPRLSPVFLGNG 644
P+ F MGI +N S + N G+++P N S+ + MSS P G
Sbjct: 581 -PLGFSDMGINRNYNS------AHGKANLGVSLPGNSSEQDFTGFGMSSMPTVPF----G 629
Query: 645 PYPGLTPANIEGLYERGRSRRIENNNGNQLDSKKQFQLELEKIRSGEDTRTTLMIKNIPN 704
GL E E+GR E++N NQ ++ ++L++I SG++ RTTL+IKNIPN
Sbjct: 630 GSRGLQSVRPEPFAEQGRIHNHESHNQNQFIDGGRYHIDLDRIASGDEIRTTLIIKNIPN 689
Query: 705 KYTSKMLLAAIDENHKGTYDFLYLPIDFKNKCNVGYAFINMLSPLHIIPFYEAFNGKKWE 764
KYT KML+A IDE HKG YDFL LP DFKNKCN+G+AFINM+SPLHI+PF + FNGK WE
Sbjct: 690 KYTYKMLVAEIDEKHKGDYDFLCLPTDFKNKCNMGHAFINMVSPLHIVPFQQTFNGKIWE 749
Query: 765 KFNSEKVASLAYARIQGRAALVAHFQNSSLMNEDKRCRP-ILFHSEGPEAGDQVTQEQLN 823
KFNS KVASLAYA IQG++AL ++ Q S M E K+ P + +H +G +A D EQL
Sbjct: 750 KFNSGKVASLAYAEIQGKSALASYMQTPSSMKEQKQLFPEVSYHDDGQDAND---HEQLF 806
Query: 824 SNSVNFQVCPSNGSHLRDASGSP 846
S+ N S+ S+ D +P
Sbjct: 807 SSIWNITAPDSDWSYTMDLIENP 829
>sp|Q75M35|OML3_ORYSJ Protein MEI2-like 3 OS=Oryza sativa subsp. japonica GN=ML3 PE=2
SV=2
Length = 955
Score = 480 bits (1235), Expect = e-134, Method: Compositional matrix adjust.
Identities = 333/804 (41%), Positives = 437/804 (54%), Gaps = 109/804 (13%)
Query: 64 GLGRQSVDDISSGLSKVHHGVA-SDDPLE---GVMNPAIGNSLPDDEDELLAGIMDDFDL 119
G R+ V + + H + SD+PLE + IG+ LPDD+D+L++GI D F+
Sbjct: 156 GKSREIVSGVLCQSTGTHTSIYDSDEPLESMEAIEAQTIGDLLPDDDDDLISGIADGFEF 215
Query: 120 RGLPSSLEDLEDYDIFGSGGGMELEGEPQESLSMSMSKISISDSASGNGLLHYSVPNGAG 179
G+ S+ +D D DIF +GGGMELE +DS G+ + S +
Sbjct: 216 TGM-STNQDDADEDIFCTGGGMELEN---------------NDSVKGDKVQDGSFKS--- 256
Query: 180 TVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDI 239
++ H + PSRTL VRNI +N+EDS+L LF+QYGDIR LYT+ KH GFV +SYYDI
Sbjct: 257 QISSGHSINKQPSRTLVVRNITANIEDSDLTVLFQQYGDIRMLYTSFKHHGFVTVSYYDI 316
Query: 240 RAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFG 299
RAA+ AMRAL +KPL KLD+ FS PK+N KD+++G LVV N+D S+SN+DL Q+
Sbjct: 317 RAAQNAMRALHSKPLGLMKLDVQFSFPKENVPGKDIDKGMLVVSNIDSSISNDDLLQMLS 376
Query: 300 AYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLM 359
YG+VKEI +P KF+EFYDVRAAE AL LN+ I+G + K+E S+ G A L
Sbjct: 377 VYGDVKEISSSPISCTKKFVEFYDVRAAEEALHDLNKGGISGPKFKVELSQHGEAGSCLR 436
Query: 360 LQLNQELEQDESRILQHQVGSPITNSPPGNWVQFSSPIEHN-PLQTISKSPNFRNMSPTT 418
Q ++E +QD L HQ NS PG + + + N + + N + SPT
Sbjct: 437 QQHSREWKQDS---LPHQP----KNSSPGTIGKLGTKCQDNSTVHNLFSPVNQQLESPTQ 489
Query: 419 SNHMPGLASILHP-----------QVSTLEKIAPIGKDQ-GRG-------SLMEHALTNT 459
G + P Q S + P+G+ GRG SL EH N
Sbjct: 490 CISTTGPQILSSPIRIKSTLQHNNQASVGDLSGPLGQGNFGRGIQTLHPRSLPEHH--NR 547
Query: 460 ISANGASFQQSNSFSEPKIGLYRGTVSSFGPSPSNGSGVET--------------LSGPQ 505
I N S S + + + GP+ G + L G
Sbjct: 548 ICNNSKSMTVSGRNASSRQDGVDHNIQKVGPAGFCGHSFDQNNEAFGFTEIGSCPLHGYH 607
Query: 506 FLWGSPSRYSEHSSSPA-WQTSSMGHPFSSNGKIHGLPYSGRQGSFLGSSQHHHVGSAPS 564
+ W + + + S+P W S++ HP + P+ GS+ HH+GSAP
Sbjct: 608 YTWNHTNVFPQSPSAPILW--SNLQHPMHVHSYPGVPPHMLNTGSY--PMDQHHLGSAPD 663
Query: 565 GVPLERRFGFLPESPETSFMNPVAFCGMGIGQNDGSFMVNMGSRASVNPGITVPRNLSDN 624
SF N +F +G ++G S P + P LS
Sbjct: 664 N--------------GGSFGNVHSFHPGSLG--------SIGLHGS--PQL-YPSELSAF 698
Query: 625 GSSFRVMSSPRLSPVFLG-----------NGPYPGL-TPANIEGLYERGRSRRIENNNGN 672
SS SPV G NG P + + + +R RSRR + N
Sbjct: 699 ASSRGNFREALFSPVGGGFQSLQQMCNAINGRNPMIHVSTSYDATNDRMRSRR-HDGNPA 757
Query: 673 QLDSKKQFQLELEKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLPIDF 732
Q ++K+QF+L++++I GED+RTTLMIKNIPNKY K+LLA IDENH+GTYDF+YLPIDF
Sbjct: 758 QSENKRQFELDIDRIAKGEDSRTTLMIKNIPNKYNCKLLLAVIDENHRGTYDFIYLPIDF 817
Query: 733 KNKCNVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHFQNS 792
KNKCNVGYAFINM P HIIPFY+ FNGKKWEKFNSEKVASLAYARIQGR+AL+AHFQNS
Sbjct: 818 KNKCNVGYAFINMTDPQHIIPFYKTFNGKKWEKFNSEKVASLAYARIQGRSALIAHFQNS 877
Query: 793 SLMNEDKRCRPILFHSEGPEAGDQ 816
SLMNEDK CRP+LFH +GP AGDQ
Sbjct: 878 SLMNEDKWCRPMLFHKDGPNAGDQ 901
>sp|Q64M78|OML4_ORYSJ Protein MEI2-like 4 OS=Oryza sativa subsp. japonica GN=ML4 PE=2
SV=1
Length = 1001
Score = 298 bits (763), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 199/368 (54%), Positives = 254/368 (69%), Gaps = 37/368 (10%)
Query: 27 SCGRIAGSDSYLASDDASLFSSSLPVLPHEKLNLNAM-GLGRQSVDDISSGLSKVHHGVA 85
S GRI + +Y ++ LFSSS+ + +KL L + GL QS++ KV
Sbjct: 129 SDGRINPNGAY---NENGLFSSSVSDIFDKKLRLTSKNGLVGQSIE-------KVDLNHV 178
Query: 86 SDDPLE---GVMNPAIGNSLPDDEDELLAGIMDDFDLRGLPSSLEDLEDYD--IFGSGGG 140
D+P E + IGN L D+D+LL+G++D+ G P++ + +D D IF +GGG
Sbjct: 179 DDEPFELTEEIEAQIIGNLL-PDDDDLLSGVVDEV---GYPTNANNRDDADDDIFYTGGG 234
Query: 141 MELEGEPQESLSMSMSKISISDSAS-GNGLLHYSVPNGAGTVAGEHPYGEHPSRTLFVRN 199
MELE + + L + SA+ G GLL+ G + GEH Y E PSRTLFVRN
Sbjct: 235 MELETDENKKLQ------EFNGSANDGIGLLN-------GVLNGEHLYREQPSRTLFVRN 281
Query: 200 INSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKL 259
INSNVEDSEL+ LFE +GDIR LYTACKHRGFVMISYYDIR+A A LQNK LRRRKL
Sbjct: 282 INSNVEDSELKLLFEHFGDIRALYTACKHRGFVMISYYDIRSALNAKMELQNKALRRRKL 341
Query: 260 DIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFI 319
DIH+SIPKDNPS+KD+NQGT+V+FN+D S++N+DL +IFG YGE+KEIR+TP K HHK I
Sbjct: 342 DIHYSIPKDNPSEKDINQGTIVLFNVDLSLTNDDLHKIFGDYGEIKEIRDTPQKGHHKII 401
Query: 320 EFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQELEQDESRILQHQVG 379
EFYDVRAAEAAL++LNR+DIAGK+IKLE SR G ARR L ++ EL Q+E + ++G
Sbjct: 402 EFYDVRAAEAALRALNRNDIAGKKIKLETSRLGAARR-LSQHMSSELCQEEFGVC--KLG 458
Query: 380 SPITNSPP 387
SP T+SPP
Sbjct: 459 SPSTSSPP 466
Score = 296 bits (759), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 171/323 (52%), Positives = 210/323 (65%), Gaps = 19/323 (5%)
Query: 505 QFLWGSPSRYSEHSSSPAWQTSSMGH----PFSSNGKIHGLPY--SGRQGSFLGSSQHHH 558
Q +W + S + H +SP S P S ++HG+P S + H H
Sbjct: 637 QLMWNNSSNFHHHPNSPVLWPSPGSFVNNVPSRSPAQMHGVPRAPSSHMIDNVLPMHHLH 696
Query: 559 VGSAPSGVP--LERRFGFLPESPETSFMNPVAFCGMGIGQNDGSFMVNMGSRASVNPGIT 616
VGSAP+ P +RR G+ E E +P + MG GS ++ ++ P
Sbjct: 697 VGSAPAINPSLWDRRHGYAGELTEAPNFHPGSVGSMGF---PGSPQLHSMELNNIYP--Q 751
Query: 617 VPRNLSDNGSSFRVMSSP---RLSPVFLGNGPYPGLTPANIEGLYERGRSRRIENNNGNQ 673
N D S + P + +F G P L + G ER RSRR ++NGNQ
Sbjct: 752 TGGNCMDPTVSPAQIGGPSPQQRGSMFHGRNPMVPLPSFDSPG--ERMRSRR-NDSNGNQ 808
Query: 674 LDSKKQFQLELEKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLPIDFK 733
D+KKQ++L++++I G+D+RTTLMIKNIPNKYTSKMLLAAIDENHKGTYDF+YLPIDFK
Sbjct: 809 SDNKKQYELDVDRIVRGDDSRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFIYLPIDFK 868
Query: 734 NKCNVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHFQNSS 793
NKCNVGYAFINM +P HIIPFY+ FNGKKWEKFNSEKVASLAYARIQG++AL+AHFQNSS
Sbjct: 869 NKCNVGYAFINMTNPQHIIPFYQTFNGKKWEKFNSEKVASLAYARIQGKSALIAHFQNSS 928
Query: 794 LMNEDKRCRPILFHSEGPEAGDQ 816
LMNEDKRCRPILFHS+GP AGDQ
Sbjct: 929 LMNEDKRCRPILFHSDGPNAGDQ 951
>sp|Q9LYN7|AML4_ARATH Protein MEI2-like 4 OS=Arabidopsis thaliana GN=ML4 PE=1 SV=1
Length = 907
Score = 273 bits (698), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 152/267 (56%), Positives = 189/267 (70%), Gaps = 12/267 (4%)
Query: 556 HHHVGSAPS-GVPL-ERRFGFLPESPETSFMNPVAFCGMGIGQNDGSFMVNMGSRASVNP 613
HHH+GSAP P +RR ++ ESPE+S + + MG + S ++ GS +
Sbjct: 603 HHHIGSAPVLNSPFWDRRQAYVAESPESSGFHLGSPGSMGFPGSSPSHPMDFGSHKVFS- 661
Query: 614 GITVPRNLSDNGSSFRVMSSPRLSP-VFLGNGPYPGLTPANIEGLYERGRS---RRIENN 669
V N + S V+ S R P +F G P ++ + + ER R+ RR E+N
Sbjct: 662 --HVGGNRMEANSKNAVLRSSRQMPHLFTGRSPMLSVS-GSFDLPNERYRNLSHRRSESN 718
Query: 670 NGNQLDSKKQFQLELEKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLP 729
+ N KK ++L++++I GED+RTTLMIKNIPNKYTSKMLLAAIDE KGTYDFLYLP
Sbjct: 719 SSNA--EKKLYELDVDRILRGEDSRTTLMIKNIPNKYTSKMLLAAIDEYCKGTYDFLYLP 776
Query: 730 IDFKNKCNVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHF 789
IDFKNKCNVGYAFIN++ P +I+PFY+AFNGKKWEKFNSEKVASLAY RIQG++AL+AHF
Sbjct: 777 IDFKNKCNVGYAFINLIEPENIVPFYKAFNGKKWEKFNSEKVASLAYGRIQGKSALIAHF 836
Query: 790 QNSSLMNEDKRCRPILFHSEGPEAGDQ 816
QNSSLMNEDKRCRPILFH+ GP AGDQ
Sbjct: 837 QNSSLMNEDKRCRPILFHTAGPNAGDQ 863
Score = 216 bits (549), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 123/258 (47%), Positives = 172/258 (66%), Gaps = 19/258 (7%)
Query: 97 AIGNSLPDDEDELLAGIMDDFDLRGLPSSLEDLEDYDIFGSGGGMELEGEPQESLSMSMS 156
IGN LPD ED+L A ++ + + + +DL+D D+F S GGMEL+G+ S
Sbjct: 133 TIGNLLPD-EDDLFAEVVGEGVHKSRANGGDDLDDCDLFSSVGGMELDGD-------VFS 184
Query: 157 KISISDSASGNGLLHYSVPNGAGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQY 216
+S D G+ + TVA EHP GE SR LFVRN++S++ED EL LF+Q+
Sbjct: 185 SVSQRDGKRGSNV---------STVA-EHPQGEILSRILFVRNVDSSIEDCELGVLFKQF 234
Query: 217 GDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLN 276
GD+R L+TA K+RGF+M+SYYDIRAA+ A RAL + LR RKLDI +SIPK+NP + +
Sbjct: 235 GDVRALHTAGKNRGFIMVSYYDIRAAQKAARALHGRLLRGRKLDIRYSIPKENPKENS-S 293
Query: 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNR 336
+G L V NLD S+SNE+L IF +YGE++E+R T H+ +IEF+DVR A+ AL+ LN
Sbjct: 294 EGALWVNNLDSSISNEELHGIFSSYGEIREVRRTMHENSQVYIEFFDVRKAKVALQGLNG 353
Query: 337 SDIAGKRIKLEPSRPGGA 354
++AG+++KL P+ P G
Sbjct: 354 LEVAGRQLKLAPTCPEGT 371
>sp|Q8W4I9|AML1_ARATH Protein MEI2-like 1 OS=Arabidopsis thaliana GN=ML1 PE=1 SV=1
Length = 915
Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 172/259 (66%), Gaps = 19/259 (7%)
Query: 97 AIGNSLPDDEDELLAGIMDDFDLRGLPSSLEDLEDYDIFGSGGGMELEGEPQESLSMSMS 156
IGN LPD ED+L A + + + ++ ++L+++D+F S GGMEL+G+ S+S
Sbjct: 140 TIGNLLPD-EDDLFAEVTGEVGRKSRANTGDELDEFDLFSSVGGMELDGDIFSSVS---- 194
Query: 157 KISISDSASGNGLLHYSVPNGAGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQY 216
H + G GE GE PSRTL V NI+SNVED EL+ LFEQ+
Sbjct: 195 --------------HRNGERGGNNSVGELNRGEIPSRTLLVGNISSNVEDYELKVLFEQF 240
Query: 217 GDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLN 276
GDI+ L+TACK+RGF+M+SY DIRAA+ A RALQNK LR KLDI +SI K+NPS KD +
Sbjct: 241 GDIQALHTACKNRGFIMVSYCDIRAAQNAARALQNKLLRGTKLDIRYSISKENPSQKDTS 300
Query: 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNR 336
+G L+V NLD S+SN++L ++ +YGEVKEIR T H +IEF+DVRAA AAL LN
Sbjct: 301 KGALLVNNLDSSISNQELNRLVKSYGEVKEIRRTMHDNSQIYIEFFDVRAAAAALGGLNG 360
Query: 337 SDIAGKRIKLEPSRPGGAR 355
++AGK+++L P+ P G R
Sbjct: 361 LEVAGKKLQLVPTYPEGTR 379
>sp|P08965|MEI2_SCHPO Meiosis protein mei2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mei2 PE=1 SV=1
Length = 750
Score = 156 bits (394), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 94/133 (70%)
Query: 682 LELEKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLPIDFKNKCNVGYA 741
++ +I SG DTRTT+MIKNIPNK+T +ML ID +KGTYDFLYL IDF NKCNVGYA
Sbjct: 584 VDYAQIASGIDTRTTVMIKNIPNKFTQQMLRDYIDVTNKGTYDFLYLRIDFVNKCNVGYA 643
Query: 742 FINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHFQNSSLMNEDKRC 801
FIN + P II F +A G +W F+SEK+ ++YA IQG+ L+ F+NS +M+E+
Sbjct: 644 FINFIEPQSIITFGKARVGTQWNVFHSEKICDISYANIQGKDRLIEKFRNSCVMDENPAY 703
Query: 802 RPILFHSEGPEAG 814
RP +F S GP G
Sbjct: 704 RPKIFVSHGPNRG 716
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-ACKHRGFVMISYYDIRAARTAMRA 248
H SR LFV N+ V + L LF + GD++ + T + G +++++DIR A A ++
Sbjct: 192 HASRYLFVTNLPRIVPYATLLELFSKLGDVKGIDTSSLSTDGICIVAFFDIRQAIQAAKS 251
Query: 249 LQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPS-------------VSNEDLR 295
L+++ +L ++F + + K +NQG + F LD + +S L+
Sbjct: 252 LRSQRFFNDRL-LYFQFCQRSSIQKMINQGATIQF-LDDNEGQLLLNMQGGSVLSILQLQ 309
Query: 296 QIFGAYGEVKEIRETPHKRHHKFI-EFYDVRAAEAALKSLN 335
I +G + ++ + + I EFYD R A AL L+
Sbjct: 310 SILQTFGPLLIMKPLRSQNVSQIICEFYDTRDASFALDELD 350
>sp|A2WY46|EAR1_ORYSI Protein terminal ear1 homolog OS=Oryza sativa subsp. indica GN=PLA2
PE=2 SV=1
Length = 680
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 83/136 (61%), Gaps = 19/136 (13%)
Query: 689 SGEDTRTTLMIKNIPNKYTSKMLLAAIDENHK------------------GTYDFLYLPI 730
S +DTRTT+MI+NIPNKY+ K+LL +D NH +YDFLYLPI
Sbjct: 449 SCKDTRTTVMIRNIPNKYSQKLLLNMLD-NHCILSNQQIEASCEDEAQPFSSYDFLYLPI 507
Query: 731 DFKNKCNVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHFQ 790
DF NKCNVGY F+N+ SP + Y+AF+ + WE FNS K+ + YAR+QG AL HF+
Sbjct: 508 DFNNKCNVGYGFVNLTSPEAAVRLYKAFHKQPWEVFNSRKICQVTYARVQGLDALKEHFK 567
Query: 791 NSSLMNEDKRCRPILF 806
NS + P++F
Sbjct: 568 NSKFPCDSDEYLPVVF 583
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 50/228 (21%)
Query: 172 YSVPNGAGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTL-YTACKHRG 230
Y VP A V G SR + + + + + E+ +G +R + +A G
Sbjct: 83 YCVPAAATVVDGPA------SRAVVLSLVPPHAPEDEIARAMAPFGAVRAVDASAVASEG 136
Query: 231 FVMISYYDIRAARTAMRALQNKPLRRR--------------------------------- 257
+ ++D+R+A A+ ++ + +R++
Sbjct: 137 VATVYFFDLRSAEHAVTGVREQHIRQQCRLGQLYAAAAAAAASSPTWPPPAWDWPHDDNR 196
Query: 258 ------KLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETP 311
+ HF+ P D ++G+LVV N P++S +LR+IF AYG+VK++RE+
Sbjct: 197 GLVLGQAVWAHFAAASTVPDD-GASRGSLVVLNSLPAMSVFELREIFQAYGDVKDVRESA 255
Query: 312 HKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLE---PSRPGGARR 356
+ +KF+EF+D R A+ AL LN ++ G+R+ +E PS PG RR
Sbjct: 256 LRPSNKFVEFFDTRDADRALHELNGKELFGRRLVVEYTRPSLPGPRRR 303
>sp|Q0JGS5|EAR1_ORYSJ Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica
GN=PLA2 PE=2 SV=1
Length = 683
Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 83/136 (61%), Gaps = 19/136 (13%)
Query: 689 SGEDTRTTLMIKNIPNKYTSKMLLAAIDENHK------------------GTYDFLYLPI 730
S +DTRTT+MI+NIPNKY+ K+LL +D NH +YDFLYLPI
Sbjct: 452 SCKDTRTTVMIRNIPNKYSQKLLLNMLD-NHCILSNQQIEASCEDEAQPFSSYDFLYLPI 510
Query: 731 DFKNKCNVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHFQ 790
DF NKCNVGY F+N+ SP + Y+AF+ + WE FNS K+ + YAR+QG AL HF+
Sbjct: 511 DFNNKCNVGYGFVNLTSPEAAVRLYKAFHKQPWEVFNSRKICQVTYARVQGLDALKEHFK 570
Query: 791 NSSLMNEDKRCRPILF 806
NS + P++F
Sbjct: 571 NSKFPCDSDEYLPVVF 586
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 50/228 (21%)
Query: 172 YSVPNGAGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTL-YTACKHRG 230
Y VP A V G SR + + + + + E+ +G +R + +A G
Sbjct: 83 YCVPAAATVVDGPA------SRAVVLSLVPPHAPEDEIARAMAPFGAVRAVDASAVASEG 136
Query: 231 FVMISYYDIRAARTAMRALQNKPLRRR--------------------------------- 257
+ ++D+R+A A+ ++ + +R++
Sbjct: 137 VATVYFFDLRSAEHAVTGVREQHIRQQCRLGQLYAAAAAAAASSPTWPPPAWDWPHDDNR 196
Query: 258 ------KLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETP 311
+ HF+ P D ++G+LVV N P++S +LR+IF AYG+VK++RE+
Sbjct: 197 GLVLGQAVWAHFAAASTVPDD-GASRGSLVVLNSLPAMSVFELREIFQAYGDVKDVRESA 255
Query: 312 HKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLE---PSRPGGARR 356
+ +KF+EF+D R A+ AL LN ++ G+R+ +E PS PG RR
Sbjct: 256 LRPSNKFVEFFDTRDADRALHELNGKELFGRRLVVEYTRPSLPGPRRR 303
>sp|O65001|TE1_MAIZE Protein terminal ear1 OS=Zea mays GN=TE1 PE=2 SV=1
Length = 656
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 83/143 (58%), Gaps = 17/143 (11%)
Query: 692 DTRTTLMIKNIPNKYTSKMLLAAID---------------ENHKGTYDFLYLPIDFKNKC 736
DTRTT+MI+NIPNKY+ K+LL +D E YDF+YLPIDF NKC
Sbjct: 438 DTRTTVMIRNIPNKYSQKLLLNMLDNHCIQSNEWIVASGEEQPFSAYDFVYLPIDFNNKC 497
Query: 737 NVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHFQNSSLMN 796
NVGY F+N+ SP + Y+AF+ + WE +NS K+ + YAR+QG AL HF+NS
Sbjct: 498 NVGYGFVNLTSPEARVRLYKAFHKQPWEVYNSRKICQVTYARVQGLEALKEHFKNSKFPC 557
Query: 797 EDKRCRPILFH--SEGPEAGDQV 817
+ P+ F +G E D V
Sbjct: 558 DSDEYLPVAFSPARDGKELTDPV 580
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 52/224 (23%)
Query: 172 YSVPNGAGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTL-YTACKHRG 230
Y++P V G SR + + + + +++++ +G IR++ A G
Sbjct: 72 YTLPTTTPVVNGPS------SRVVVLGLVPPHAQEADVAQAMAPFGAIRSVDACAVASEG 125
Query: 231 FVMISYYDIRAARTAMRALQNKPLRRR--------------------------------- 257
+ ++DIRAA A+ ++ + +R++
Sbjct: 126 VATVHFFDIRAAELALTCVREQHMRQQSRLGQLYAAAAVAPAWAPAPTPQAWDWPHPNDD 185
Query: 258 --------KLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE 309
+ HF+ D D D N+G+LVV + P VS DLRQ+F A+G++K++RE
Sbjct: 186 GRGLVLGHAVWAHFATGAD---DGD-NRGSLVVLSPLPGVSVADLRQVFQAFGDLKDVRE 241
Query: 310 TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353
+ + HKF++F+D R A AL LN ++ G+R+ +E +RP G
Sbjct: 242 SAQRPSHKFVDFFDTRDAARALAELNGQELFGRRLVVEFTRPSG 285
>sp|Q652K6|OML6_ORYSJ Protein MEI2-like 6 OS=Oryza sativa subsp. japonica GN=ML6 PE=2
SV=1
Length = 323
Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 69/149 (46%), Gaps = 21/149 (14%)
Query: 693 TRTTLMIKNIPNKYTSKMLLAAIDENH-------------------KGTYDFLYLPIDFK 733
T T+LMI+NIPNK+ L+A +D++ K YDF Y+PIDFK
Sbjct: 168 TTTSLMIRNIPNKFLKARLMAILDQHCADENGKCHRRGGGGGRSVVKSEYDFFYVPIDFK 227
Query: 734 NKCNVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHFQNSS 793
N GYAF+NM + +W+ S KV + A IQG A VAHF S
Sbjct: 228 TGFNKGYAFVNMTTATAARRLRAFLQDHRWDAAMSGKVCDVVPAAIQGLDAFVAHFSASC 287
Query: 794 LMNEDKRCRPILFHSEGPEAGDQVTQEQL 822
K P+ F E P G+Q T+ +
Sbjct: 288 FPCRTKEFLPVWF--EPPRDGEQQTKAHV 314
>sp|Q9FPJ8|RB45A_ARATH Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana
GN=RBP45A PE=2 SV=1
Length = 387
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 23/197 (11%)
Query: 176 NGAGTVAGEHPY-GEHPSRTLFVRNINSNVEDSELRALFEQ-YGDIRTLY-----TACKH 228
N A AGE + E P T+FV ++ V D L F+ YG ++ T +
Sbjct: 136 NWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRS 195
Query: 229 RGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD---------------NPSDK 273
+G+ + + D AM + + R + I + K+ N D
Sbjct: 196 KGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAGDN 255
Query: 274 DLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKS 333
D N T+ V LD +V++++L+ IFG +GE+ ++ P KR F+++ + +AE AL
Sbjct: 256 DPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKR-CGFVQYANKASAEHALSV 314
Query: 334 LNRSDIAGKRIKLEPSR 350
LN + + G+ I+L R
Sbjct: 315 LNGTQLGGQSIRLSWGR 331
>sp|Q8LPQ9|FPA_ARATH Flowering time control protein FPA OS=Arabidopsis thaliana GN=FPA
PE=2 SV=2
Length = 901
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQN 251
S L+V ++ +S+L LF +YGDI + T RGF I Y + A A ALQ
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRI-TVYSSRGFAFIYYRHVEEAVAAKEALQG 75
Query: 252 KPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETP 311
L ++ I ++ P P +L V + P+VS +DL + F +G++++ R
Sbjct: 76 ANLNGSQIKIEYARPA-KPCK------SLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFL- 127
Query: 312 HKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLE 347
+R FI++Y++ A A KS+N + G ++++
Sbjct: 128 RERKTAFIDYYEMDDALQA-KSMNGKPMGGSFLRVD 162
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 272 DKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAAL 331
D L V +L P + DL ++FG YG++ I R FI + V A AA
Sbjct: 12 DSGFQSNNLWVGSLTPETTESDLTELFGRYGDIDRI-TVYSSRGFAFIYYRHVEEAVAAK 70
Query: 332 KSLNRSDIAGKRIKLEPSRPGGARRNLML 360
++L +++ G +IK+E +RP ++L +
Sbjct: 71 EALQGANLNGSQIKIEYARPAKPCKSLWV 99
>sp|Q6ET49|OML7_ORYSJ Protein MEI2-like 7 OS=Oryza sativa subsp. japonica GN=OML7 PE=2
SV=1
Length = 389
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 20/124 (16%)
Query: 695 TTLMIKNIPNKYTSKMLLAAIDEN-------------HKGTYDFLYLPIDF-----KNKC 736
TT+M++NIPNK T ++ +D++ + YD +Y+ +DF +
Sbjct: 216 TTVMVRNIPNKLTRSDMVRLLDDHCARENRRRGRGGEPRAEYDLVYVRMDFGMCNKERSS 275
Query: 737 NVGYAFINMLSPLHIIPFYEAFNGKKWEK--FNSEKVASLAYARIQGRAALVAHFQNSSL 794
N+GYAF+N + A +G +W++ F+S K+ + ARIQG+ ALV HF ++
Sbjct: 276 NMGYAFVNFTTAEAARGLQRALHGCRWKRSAFDSGKIIDIRAARIQGKDALVRHFGRTTY 335
Query: 795 MNED 798
D
Sbjct: 336 YECD 339
>sp|Q9LEB4|RBP45_NICPL Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia
GN=RBP45 PE=1 SV=1
Length = 409
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 194 TLFVRNINSNVEDSELRALFEQ-YGDIR-----TLYTACKHRGFVMISYYDIRAARTAMR 247
T+FV ++ ++V D L+ F+ Y +R T + +G+ + + D AM
Sbjct: 177 TIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMT 236
Query: 248 ALQNKPLRRRKLDI---------------HFSIPKDNPSDKDLNQGTLVVFNLDPSVSNE 292
+ R + I + P+ + D N T+ V LDP+V+ E
Sbjct: 237 EMNGVLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQGESDPNNTTIFVGGLDPTVAEE 296
Query: 293 DLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350
LRQ+F YGE+ ++ KR F++F +AE AL SLN + + G+ I+L R
Sbjct: 297 HLRQVFSPYGELVHVKIVAGKR-CGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGR 353
>sp|P13383|NUCL_RAT Nucleolin OS=Rattus norvegicus GN=Ncl PE=1 SV=3
Length = 713
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQN 251
+RTL +N++ N+ + EL+ +FE +IR + + +G I + A + Q
Sbjct: 396 ARTLLAKNLSFNITEDELKEVFEDAVEIRLVSQDGRSKGIAYIEFKSEADAEKNLEEKQG 455
Query: 252 KPLRRRKLDIHFSIPKDNPSDKDLNQG-------TLVVFNLDPSVSNEDLRQIFGAYGEV 304
+ R + ++++ K ++ TLV+ NL S + E L+++F +
Sbjct: 456 AEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFI 515
Query: 305 KEIRETPH--KRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGA 354
K + + PH + + FIEF A+ AL S N+ +I G+ I+LE P G+
Sbjct: 516 K-VPQNPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLELQGPRGS 566
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 76/165 (46%), Gaps = 3/165 (1%)
Query: 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTA-CKHRGFVMISYYDIRAARTAMRALQ 250
S+TL + N++ + + L+ +FE+ I+ K +G+ I + A+ A+ +
Sbjct: 488 SKTLVLSNLSYSATEETLQEVFEKATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCN 547
Query: 251 NKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIF--GAYGEVKEIR 308
+ R + + P+ +P+ + TL V L + E L++ F + R
Sbjct: 548 KMEIEGRTIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFEGSVRARIVTDR 607
Query: 309 ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353
ET + F++F A+AA +++ +I G ++ L+ ++P G
Sbjct: 608 ETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKG 652
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 195 LFVRNINSNVEDSELR-ALFEQYG-------DIRTLYTACKHRGFVMISYYDIRAARTAM 246
LF+ N+N N +EL+ A+ E + D+RT +R F Y D +A
Sbjct: 313 LFIGNLNPNKSVAELKVAISELFAKNDLAAVDVRT----GTNRKF---GYVDFESAEDLE 365
Query: 247 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 306
+AL+ L+ +I PK S K TL+ NL +++ ++L+++F E++
Sbjct: 366 KALELTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFEDAVEIRL 425
Query: 307 IRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL 346
+ + + +IEF AE L+ ++I G+ + L
Sbjct: 426 VSQDGRSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSL 465
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKH----RGFVMISYYDIRAARTA 245
PS+TLFV+ ++ + + L+ FE G +R + +GF + + A+ A
Sbjct: 572 QPSKTLFVKGLSEDTTEETLKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAA 629
Query: 246 MRALQNKPLRRRKLDIHFSIPK 267
A+++ + K+ + ++ PK
Sbjct: 630 KEAMEDGEIDGNKVTLDWAKPK 651
>sp|P09405|NUCL_MOUSE Nucleolin OS=Mus musculus GN=Ncl PE=1 SV=2
Length = 707
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQN 251
+RTL +N++ N+ + EL+ +FE +IR + K +G I + A + Q
Sbjct: 394 ARTLLAKNLSFNITEDELKEVFEDAMEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQG 453
Query: 252 KPLRRRKLDIHFSIPKDNPSDKDLNQG-------TLVVFNLDPSVSNEDLRQIFGAYGEV 304
+ R + ++++ K ++ TLV+ NL S + E L ++F +
Sbjct: 454 AEIDGRSVSLYYTGEKGQRQERTGKTSTWSGESKTLVLSNLSYSATKETLEEVFEKATFI 513
Query: 305 KEIRETPH--KRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLE 347
K + + PH + + FIEF A+ AL S N+ +I G+ I+LE
Sbjct: 514 K-VPQNPHGKPKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLE 557
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 195 LFVRNINSNVEDSELR-ALFEQYG-------DIRTLYTACKHRGFVMISYYDIRAARTAM 246
LF+ N+N N +EL+ A+ E + D+RT +R F Y D +A
Sbjct: 311 LFIGNLNPNKSVNELKFAISELFAKNDLAVVDVRT----GTNRKF---GYVDFESAEDLE 363
Query: 247 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 306
+AL+ L+ +I PK S K TL+ NL +++ ++L+++F E++
Sbjct: 364 KALELTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFEDAMEIRL 423
Query: 307 IRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL 346
+ + + +IEF AE L+ ++I G+ + L
Sbjct: 424 VSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSL 463
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTA-CKHRGFVMISYYDIRAARTAMRALQ 250
S+TL + N++ + L +FE+ I+ K +G+ I + A+ A+ +
Sbjct: 486 SKTLVLSNLSYSATKETLEEVFEKATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCN 545
Query: 251 NKPLRRR--KLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIF--GAYGEVKE 306
+ R +L++ S + PS TL V L + E L++ F +
Sbjct: 546 KMEIEGRTIRLELQGSNSRSQPSK------TLFVKGLSEDTTEETLKESFEGSVRARIVT 599
Query: 307 IRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353
RET + F++F A+AA +++ +I G ++ L+ ++P G
Sbjct: 600 DRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKG 646
Score = 35.0 bits (79), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKH----RGFVMISYYDIRAARTA 245
PS+TLFV+ ++ + + L+ FE G +R + +GF + + A+ A
Sbjct: 566 QPSKTLFVKGLSEDTTEETLKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAA 623
Query: 246 MRALQNKPLRRRKLDIHFSIPK 267
A+++ + K+ + ++ PK
Sbjct: 624 KEAMEDGEIDGNKVTLDWAKPK 645
>sp|Q93W34|RP45C_ARATH Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana
GN=RBP45C PE=2 SV=1
Length = 415
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 176 NGAGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQ-YGDIRTLY-----TACKHR 229
N A AGE E P T+FV ++ +V D L F+ Y ++ T + +
Sbjct: 156 NWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSK 215
Query: 230 GFVMISYYDIRAARTAMRALQ-----NKPLR------RRKLDIH---FSIPKDNPSDKDL 275
G+ + + D AM + ++P+R ++ L + + + N + D
Sbjct: 216 GYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNSGESDP 275
Query: 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLN 335
T+ V +D SV+ +DL+ +FG +GE+ ++ P + F+++ + AE AL LN
Sbjct: 276 TNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVK-IPAGKRCGFVQYANRACAEQALSVLN 334
Query: 336 RSDIAGKRIKLEPSR 350
+ + G+ I+L R
Sbjct: 335 GTQLGGQSIRLSWGR 349
>sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5
PE=1 SV=3
Length = 682
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACK---HR--GFVMISYYDIRAART 244
HP+ +L+V +++ +V +S L LF Q + L C+ HR G+ +++ + A
Sbjct: 56 HPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNL-RVCRDLTHRSLGYAYVNFANPEDASR 114
Query: 245 AMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEV 304
AM +L P+R R + I S +PS + +G + + NLD S+ N+ L + F ++G +
Sbjct: 115 AMESLNYAPIRDRPIRIMLS--NRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTI 172
Query: 305 KEIR----ETPHKRHHKFIEFYDVRAAEAALKSLN 335
+ + + F++F A+AA+ LN
Sbjct: 173 LSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLN 207
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 41/225 (18%)
Query: 188 GEHPSRT-LFVRNINSNVEDSELRALFEQYGDIRTLYTACKH----RGFVMISYYDIRAA 242
G PS T ++V+N+ + D EL+ F +YGDI + R F +++ AA
Sbjct: 233 GAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAA 292
Query: 243 RTAMRAL---------------QNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDP 287
A+ + Q K R +L F + + +K L L + NLD
Sbjct: 293 AVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEK-LQGSNLYLKNLDD 351
Query: 288 SVSNEDLRQIFGAYGEVKEIRETPH----KRHHKFIEFYDVRAAEAALKSLNRSDIAGKR 343
SV++E L+++F YG V + + R F+ + + A A+K +N GK
Sbjct: 352 SVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMN-----GKM 406
Query: 344 IKLEPSRPGGARRNLMLQLNQELEQDESRI--LQHQVGSPITNSP 386
I R+ L + L Q E+ ++ + L Q+ SP T SP
Sbjct: 407 I---------GRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSP 442
>sp|Q4R4J7|NUCL_MACFA Nucleolin OS=Macaca fascicularis GN=NCL PE=2 SV=3
Length = 711
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 183 GEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAA 242
G+ E +RTL +N+ V EL+ +FE +IR + K +G I + A
Sbjct: 384 GKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADA 443
Query: 243 RTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQG----------TLVVFNLDPSVSNE 292
Q + R + ++++ K ++D G TLV+ NL S + E
Sbjct: 444 EKTFEEKQGTEIDGRSISLYYTGEKGQ--NQDYRGGKNSTWSGESKTLVLSNLSYSATEE 501
Query: 293 DLRQIFGAYGEVKEIRETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351
L+++F +K + K + + FIEF A+ AL S N+ +I G+ I+LE P
Sbjct: 502 TLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGP 561
Query: 352 GGA 354
G+
Sbjct: 562 RGS 564
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTA-CKHRGFVMISYYDIRAARTAMRALQ 250
S+TL + N++ + + L+ +FE+ I+ K +G+ I + A+ A+ +
Sbjct: 486 SKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCN 545
Query: 251 NKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEI--R 308
+ + R + + P+ +P+ + TL V L + E L++ F + + R
Sbjct: 546 KREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDR 605
Query: 309 ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353
ET + F++F A+AA +++ +I G ++ L+ ++P G
Sbjct: 606 ETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKG 650
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 195 LFVRNINSNVEDSELRA----LFEQ----YGDIRTLYTACKHRGFVMISYYDIRAARTAM 246
LFV N+N N EL+ +F + D+R T R F Y D +A
Sbjct: 310 LFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMT----RKF---GYVDFESAEDLE 362
Query: 247 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 306
+AL+ L+ +I PK S K+ + TL+ NL V+ ++L+++F E++
Sbjct: 363 KALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRL 422
Query: 307 IRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL 346
+ + + +IEF AE + ++I G+ I L
Sbjct: 423 VSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISL 462
>sp|Q5RF26|NUCL_PONAB Nucleolin OS=Pongo abelii GN=NCL PE=2 SV=3
Length = 712
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 183 GEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAA 242
G+ E +RTL +N+ V EL+ +FE +IR + K +G I + A
Sbjct: 385 GKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADA 444
Query: 243 RTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQG----------TLVVFNLDPSVSNE 292
Q + R + ++++ K ++D G TLV+ NL S + E
Sbjct: 445 EKTFEEKQGTEIDGRSISLYYTGEKGQ--NQDYRGGKNSTWSGESKTLVLSNLSYSATEE 502
Query: 293 DLRQIFGAYGEVKEIRETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351
L+++F +K + K + + FIEF A+ AL S N+ +I G+ I+LE P
Sbjct: 503 TLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGP 562
Query: 352 GGA 354
G+
Sbjct: 563 RGS 565
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTA-CKHRGFVMISYYDIRAARTAMRALQ 250
S+TL + N++ + + L+ +FE+ I+ K +G+ I + A+ A+ +
Sbjct: 487 SKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCN 546
Query: 251 NKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEI--R 308
+ + R + + P+ +P+ + TL V L + E L++ F + + R
Sbjct: 547 KREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDR 606
Query: 309 ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353
ET + F++F A+AA +++ +I G ++ L+ ++P G
Sbjct: 607 ETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKG 651
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 195 LFVRNINSNVEDSELRA----LFEQ----YGDIRTLYTACKHRGFVMISYYDIRAARTAM 246
LFV N+N N EL+ +F + D+R T R F Y D +A
Sbjct: 311 LFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMT----RKF---GYVDFESAEDLE 363
Query: 247 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 306
+AL+ L+ +I PK S K+ + TL+ NL V+ ++L+++F E++
Sbjct: 364 KALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRL 423
Query: 307 IRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL 346
+ + + +IEF AE + ++I G+ I L
Sbjct: 424 VSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISL 463
>sp|P19338|NUCL_HUMAN Nucleolin OS=Homo sapiens GN=NCL PE=1 SV=3
Length = 710
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 183 GEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAA 242
G+ E +RTL +N+ V EL+ +FE +IR + K +G I + A
Sbjct: 383 GKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKTEADA 442
Query: 243 RTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQG----------TLVVFNLDPSVSNE 292
Q + R + ++++ K ++D G TLV+ NL S + E
Sbjct: 443 EKTFEEKQGTEIDGRSISLYYTGEKGQ--NQDYRGGKNSTWSGESKTLVLSNLSYSATEE 500
Query: 293 DLRQIFGAYGEVKEIRETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351
L+++F +K + K + + FIEF A+ AL S N+ +I G+ I+LE P
Sbjct: 501 TLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGP 560
Query: 352 GGA 354
G+
Sbjct: 561 RGS 563
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTA-CKHRGFVMISYYDIRAARTAMRALQ 250
S+TL + N++ + + L+ +FE+ I+ K +G+ I + A+ A+ +
Sbjct: 485 SKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCN 544
Query: 251 NKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEI--R 308
+ + R + + P+ +P+ + TL V L + E L++ F + + R
Sbjct: 545 KREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDR 604
Query: 309 ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353
ET + F++F A+AA +++ +I G ++ L+ ++P G
Sbjct: 605 ETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKG 649
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 195 LFVRNINSNVEDSELRA----LFEQ----YGDIRTLYTACKHRGFVMISYYDIRAARTAM 246
LFV N+N N EL+ +F + D+R T R F Y D +A
Sbjct: 309 LFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMT----RKF---GYVDFESAEDLE 361
Query: 247 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 306
+AL+ L+ +I PK S K+ + TL+ NL V+ ++L+++F E++
Sbjct: 362 KALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRL 421
Query: 307 IRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL 346
+ + + +IEF AE + ++I G+ I L
Sbjct: 422 VSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISL 461
>sp|Q8C7Q4|RBM4_MOUSE RNA-binding protein 4 OS=Mus musculus GN=Rbm4 PE=1 SV=1
Length = 361
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 254
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 255 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 314
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKASTK------LHVGNISPTCTNQELRAKFEEYGPVIECDIV---K 111
Query: 315 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|P08199|NUCL_MESAU Nucleolin OS=Mesocricetus auratus GN=NCL PE=1 SV=2
Length = 714
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 13/184 (7%)
Query: 184 EHPYGE-----HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYD 238
E P G +RTL +N++ N+ + EL+ +FE +IR + K +G I +
Sbjct: 380 EKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQDGKSKGIAYIEFKS 439
Query: 239 IRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQG-------TLVVFNLDPSVSN 291
A + Q + R + ++++ K ++ TLV+ NL S +
Sbjct: 440 EADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESKTLVLSNLSYSATE 499
Query: 292 EDLRQIFGAYGEVKEIRETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350
E L+++F +K + K + + FIEF A+ AL S N+ +I G+ I+LE
Sbjct: 500 ETLQEVFEKATFIKVPQNQQGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLELQG 559
Query: 351 PGGA 354
P G+
Sbjct: 560 PRGS 563
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 76/165 (46%), Gaps = 3/165 (1%)
Query: 192 SRTLFVRNINSNVEDSELRALFEQYGDIRT-LYTACKHRGFVMISYYDIRAARTAMRALQ 250
S+TL + N++ + + L+ +FE+ I+ K +G+ I + A+ A+ +
Sbjct: 485 SKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQQGKSKGYAFIEFASFEDAKEALNSCN 544
Query: 251 NKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIF--GAYGEVKEIR 308
+ R + + P+ +P+ + TL V L + E L++ F + R
Sbjct: 545 KMEIEGRTIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFEGSVRARIVTDR 604
Query: 309 ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353
ET + F++F A+AA +++ +I G ++ L+ ++P G
Sbjct: 605 ETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKG 649
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 195 LFVRNINSNVEDSELR-ALFEQYG-------DIRTLYTACKHRGFVMISYYDIRAARTAM 246
LF+ N+N N +EL+ A+ E + D+RT +R F Y D +A
Sbjct: 310 LFIGNLNPNKSVAELKVAISEPFAKNDLAVVDVRT----GTNRKF---GYVDFESAEDLE 362
Query: 247 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 306
+AL+ L+ +I PK S K TL+ NL +++ ++L+++F E++
Sbjct: 363 KALELTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFEDALEIRL 422
Query: 307 IRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL 346
+ + + +IEF AE L+ ++I G+ + L
Sbjct: 423 VSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSL 462
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKH----RGFVMISYYDIRAARTA 245
PS+TLFV+ ++ + + L+ FE G +R + +GF + + A+ A
Sbjct: 569 QPSKTLFVKGLSEDTTEETLKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAA 626
Query: 246 MRALQNKPLRRRKLDIHFSIPK 267
A+++ + K+ + ++ PK
Sbjct: 627 KEAMEDGEIDGNKVTLDWAKPK 648
>sp|P20397|NUCL_XENLA Nucleolin OS=Xenopus laevis GN=ncl PE=2 SV=3
Length = 651
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRT-LYTACKHRGFVMISYYDIRAARTAMR 247
E SRTLFV+NI + EL+ +FE DIR ++G + + + A A+
Sbjct: 321 ERDSRTLFVKNIPYSTTVEELQEIFENAKDIRIPTGKDGSNKGIAYVEFSNEDEANKALE 380
Query: 248 ALQNKPLRRRKLDIHFSIPK-DNPSDKDLNQG---TLVVFNLDPSVSNEDLRQIFGAYGE 303
Q + R + + F+ K N +K +G LVV NL S + + LR++F
Sbjct: 381 EKQGAEIEGRSIFVDFTGEKSQNSGNKKGPEGDSKVLVVNNLSYSATEDSLREVFEKATS 440
Query: 304 VKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLE 347
++ + + FIEF A+ A+ S N ++I G+ I+LE
Sbjct: 441 IRIPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLE 484
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Query: 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRA 248
E S+ L V N++ + + LR +FE+ IR + +GF I + A+ AM +
Sbjct: 411 EGDSKVLVVNNLSYSATEDSLREVFEKATSIRIPQNQGRAKGFAFIEFSSAEDAKDAMDS 470
Query: 249 LQNKPLRRRKLDIHFSIPKDNPSDKDLNQG---TLVVFNLDPSVSNEDLRQIFGAYGEVK 305
N + R + + FS TL V L + E L++ F +
Sbjct: 471 CNNTEIEGRSIRLEFSQGGGPQGGGRGGSAQSKTLFVRGLSEDTTEETLKEAFDGSVNAR 530
Query: 306 EI--RETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353
+ R+T + F++F A+AA +++ +I G ++ L+ ++P G
Sbjct: 531 IVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTLDFAKPKG 580
>sp|Q3MHX3|RBM4_BOVIN RNA-binding protein 4 OS=Bos taurus GN=RBM4 PE=2 SV=1
Length = 362
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 254
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 255 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 314
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKTSTK------LHVGNISPTCTNKELRAKFEEYGPVIECDIV---K 111
Query: 315 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pab1 PE=1 SV=2
Length = 653
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 14/182 (7%)
Query: 173 SVPNGAGTVAGEHPYGEHP-SRTLFVRNINSNVEDSELRALFEQYG---DIRTLYTACKH 228
S P A +VA P G P S +L+V ++ +V ++ L LF G IR A
Sbjct: 61 STPTNASSVA--TPSGTAPTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTR 118
Query: 229 R--GFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLD 286
R G+ ++++++ A+ L ++ R I +S + +PS + + G + + NLD
Sbjct: 119 RSLGYAYVNFHNMEDGEKALDELNYTLIKGRPCRIMWS--QRDPSLRKMGTGNVFIKNLD 176
Query: 287 PSVSNEDLRQIFGAYGEVKEIR----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGK 342
P++ N+ L F A+G++ + E + + + F+ F V +A AA++ +N + K
Sbjct: 177 PAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDK 236
Query: 343 RI 344
++
Sbjct: 237 KV 238
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 96/209 (45%), Gaps = 27/209 (12%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTAC----KHRGFVMISYYDIRAARTAMRALQ 250
++++N+++ + + E LF Q+G+I +L K RGF ++Y + A+ A+ L
Sbjct: 263 VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELN 322
Query: 251 NKPLRRRKLDIHFSIPKDNPSDKDLN--------------QGT-LVVFNLDPSVSNEDLR 295
+K + +KL + + K + +++L QG L + NL V +E L+
Sbjct: 323 DKEYKGKKLYVGRA-QKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLK 381
Query: 296 QIFGAYGEVKEIR----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351
F A+G + + E + F+ + A A+ +N+ +AGK + + ++
Sbjct: 382 AEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALAQR 441
Query: 352 GGARRNLMLQLNQELEQDESRILQHQVGS 380
RR+ QL +++ LQ QV +
Sbjct: 442 KEVRRS---QLEAQIQARNQFRLQQQVAA 467
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/164 (19%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKH----RGFVMISYYDIRAARTAMRALQ 250
+F++N++ +++ L F +G I + A +G+ + + + +A A+ +
Sbjct: 170 VFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVN 229
Query: 251 NKPLRRRKLDIHFSIPKDNPSDK----DLNQGTLVVFNLDPSVSNEDLRQIFGAYGE--- 303
L +K+ + + + K N + + NLD ++ ++ +FG +GE
Sbjct: 230 GMLLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITS 289
Query: 304 ---VKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 344
VK+ + P R F+ + + A+ A+ LN + GK++
Sbjct: 290 LSLVKDQNDKP--RGFGFVNYANHECAQKAVDELNDKEYKGKKL 331
>sp|Q9BQ04|RBM4B_HUMAN RNA-binding protein 4B OS=Homo sapiens GN=RBM4B PE=1 SV=1
Length = 359
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 254
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 255 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 314
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKASTK------LHVGNISPTCTNQELRAKFEEYGPVIECDIV---K 111
Query: 315 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|Q06AT9|RBM4B_PIG RNA-binding protein 4B OS=Sus scrofa GN=RBM4B PE=2 SV=1
Length = 359
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 254
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 255 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 314
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKASTK------LHVGNISPTCTNQELRAKFEEYGPVIECDIV---K 111
Query: 315 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|Q9BDY9|RBM4_RABIT RNA-binding protein 4 OS=Oryctolagus cuniculus GN=RBM4 PE=2 SV=1
Length = 359
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 254
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 255 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 314
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKASTK------LHVGNISPTCTNQELRAKFEEYGPVIECDIV---K 111
Query: 315 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|Q64LC9|RBM4B_RAT RNA-binding protein 4B OS=Rattus norvegicus GN=Rbm4b PE=2 SV=2
Length = 357
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 254
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 255 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 314
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKASTK------LHVGNISPTCTNQELRAKFEEYGPVIECDIV---K 111
Query: 315 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|Q8VE92|RBM4B_MOUSE RNA-binding protein 4B OS=Mus musculus GN=Rbm4b PE=1 SV=1
Length = 357
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 254
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 255 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 314
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKASTK------LHVGNISPTCTNQELRAKFEEYGPVIECDIV---K 111
Query: 315 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|Q4R979|RBM4_MACFA RNA-binding protein 4 OS=Macaca fascicularis GN=RBM4 PE=2 SV=1
Length = 364
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 254
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 255 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 314
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKTSTK------LHVGNISPTCTNKELRAKFEEYGPVIECDIV---K 111
Query: 315 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|Q9BWF3|RBM4_HUMAN RNA-binding protein 4 OS=Homo sapiens GN=RBM4 PE=1 SV=1
Length = 364
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 254
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 255 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 314
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKTSTK------LHVGNISPTCTNKELRAKFEEYGPVIECDIV---K 111
Query: 315 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1
Length = 375
Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 87/186 (46%), Gaps = 13/186 (6%)
Query: 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRG---FVMISYYDIRAARTAMRAL 249
RTL+V N++ +V + + LF Q G ++ +H + + +Y+ R A A+ A+
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 68
Query: 250 QNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIR- 308
+ + +++ ++++ + N + V +L P ++ ED++ F +G++ + R
Sbjct: 69 NGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARV 128
Query: 309 ----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL-----EPSRPGGARRNLM 359
T + + F+ FY+ AE A+ + + G++I+ +P P + N
Sbjct: 129 VKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNT 188
Query: 360 LQLNQE 365
QL E
Sbjct: 189 KQLRFE 194
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 81/176 (46%), Gaps = 26/176 (14%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDI------RTLYTACKHRGFVMISYYDIRAARTAMRA 248
+FV +++ + ++++ F +G I + + T K +G+ +S+Y+ A A+
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATG-KSKGYGFVSFYNKLDAENAIVH 157
Query: 249 LQNKPLRRRKLDIHFSI-----PKDNPSDKD--------LNQG-----TLVVFNLDPSVS 290
+ + L R++ +++ PK + +NQ T+ + ++
Sbjct: 158 MGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLT 217
Query: 291 NEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL 346
++ +RQ F +G++ EIR P K + F+ F +A A+ S+N + I G +K
Sbjct: 218 DQLMRQTFSPFGQIMEIRVFPEK-GYSFVRFSTHESAAHAIVSVNGTTIEGHVVKC 272
>sp|Q4VXU2|PAP1L_HUMAN Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L
PE=2 SV=1
Length = 614
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKH---RGFVMISYYDIRAARTAMRALQN 251
+F++N+ ++++ L F +G+I + AC RGF + + AA+ A+ +
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 252 KPLRRRKLDI-HFSIPKDNPSD---KDLNQGTLVVFNLDPSVSNEDLRQIFGAYGE---V 304
L RK+ + HF ++ ++ + L + V NL V + L+ +F +G+ V
Sbjct: 161 MLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSV 220
Query: 305 KEIRE-TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLN 363
K +R+ + H R F+ F A+ A+ +N +++G+ + ++ R+N + +
Sbjct: 221 KVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRF 280
Query: 364 QELEQDESRILQ 375
++++QD R Q
Sbjct: 281 EQMKQDRLRRYQ 292
Score = 37.7 bits (86), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 195 LFVRNINSNVEDSELRALFEQYGD---IRTLYTACKH-RGFVMISYYDIRAARTAMRALQ 250
++V+N+ +V++ L+ LF Q+G ++ + H R F +++ A+ A+ +
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 251 NKPLRRRKL---DIHFSIPKDNPSDKDLNQGT-----------LVVFNLDPSVSNEDLRQ 296
K + R L + + N + Q L V NLD S+ ++ LR+
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRK 312
Query: 297 IFGAYGEV---KEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353
F YG + K + E H + F+ F A A+ +N + K + + ++
Sbjct: 313 EFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 372
Query: 354 ARRNLM 359
R+ ++
Sbjct: 373 ERKAIL 378
>sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=pab1 PE=2 SV=2
Length = 732
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 23/138 (16%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLY----TACKHRGFVMISYYDIRAARTAMRALQ 250
++++NI+ VED E R LFE++G+I + + K RGF +++ +A+ A+ +
Sbjct: 225 IYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVNFSTHESAQAAVEEMN 284
Query: 251 NKPLRRRKLDIHFSIPKDNPSDKDLN--------------QGT-LVVFNLDPSVSNEDLR 295
+K +R +KL + + K + +++L QG L V NL V ++ LR
Sbjct: 285 DKEVRSQKLYVGRA-QKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDVDDDKLR 343
Query: 296 QIFGAYGEV---KEIRET 310
++FG YG + K +R+T
Sbjct: 344 ELFGPYGTITSAKVMRDT 361
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKH----RGFVMISYYDIRAARTAMRALQ 250
+F++N++S +++ L F +G+I + A +G+ + Y AA A++ +
Sbjct: 132 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVN 191
Query: 251 NKPLRRRKLDIHFSIPKDNPSDK----DLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 306
L +K+ + I K + K N + + N+DP V +E+ R++F +GE+
Sbjct: 192 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITS 251
Query: 307 I---RETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 344
R++ K R F+ F +A+AA++ +N ++ +++
Sbjct: 252 ATLSRDSEGKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKL 293
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 192 SRTLFVRNINSNVEDSELRALFE---QYGDIRTLYTACKHR--GFVMISYYDIRAARTAM 246
S +L+V ++ +V ++ L LF Q IR A R G+ ++Y D A+
Sbjct: 41 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERAL 100
Query: 247 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 306
L ++ + I +S + +P+ + QG + + NLD ++ N+ L F A+G +
Sbjct: 101 DELNYTLIKGKPCRIMWS--QRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS 158
Query: 307 IR----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 344
+ E + + F+ + AA A+K +N + K++
Sbjct: 159 CKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 200
Score = 37.4 bits (85), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIR-----ETPHKRHHKFIEFYDVRAAEAALK 332
+L V LDPSV+ L ++F + G+V IR T + ++ + D E AL
Sbjct: 42 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALD 101
Query: 333 SLNRSDIAGKRIKL 346
LN + I GK ++
Sbjct: 102 ELNYTLIKGKPCRI 115
>sp|P15771|NUCL_CHICK Nucleolin OS=Gallus gallus GN=NCL PE=1 SV=1
Length = 694
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 6/176 (3%)
Query: 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIR-TLYTACKHRGFVMISYYDIRAARTAMR 247
E +RTLFV+N+ V + E++ +FE ++R L +G I + A A+
Sbjct: 367 ERDARTLFVKNLPYRVTEDEMKNVFENALEVRLVLNKEGSSKGMAYIEFKTEAEAEKALE 426
Query: 248 ALQNKPLRRRKLDIHFSIPKDNPSDK----DLNQGTLVVFNLDPSVSNEDLRQIFGAYGE 303
Q + R + I ++ K + + TL+V NL + S E L+++F
Sbjct: 427 EKQGTEVDGRAMVIDYTGEKSQQESQKGGGERESKTLIVNNLSYAASEETLQELFKKATS 486
Query: 304 VKEIRETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNL 358
+K + + + + F+EF A+ AL S N ++I G+ I+LE S P + N+
Sbjct: 487 IKMPQNNQGRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEFSSPSWQKGNM 542
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 188 GEHPSRTLFVRNINSNVEDSELRALFEQYGDIRT-LYTACKHRGFVMISYYDIRAARTAM 246
GE S+TL V N++ + L+ LF++ I+ + +G+ + + A+ A+
Sbjct: 456 GERESKTLIVNNLSYAASEETLQELFKKATSIKMPQNNQGRPKGYAFVEFPTAEDAKEAL 515
Query: 247 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQG------TLVVFNLDPSVSNEDLRQIFGA 300
+ N + R + + FS P + + G TL V L + E LR+ F
Sbjct: 516 NSCNNTEIEGRAIRLEFSSPSWQKGNMNARGGFNQQSKTLFVRGLSEDTTEETLRESFEG 575
Query: 301 YGEVKEI--RETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353
+ + R+T + F++F A+AA +++ +I G ++ L+ ++P G
Sbjct: 576 SISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGEIDGNKVTLDFAKPKG 630
>sp|Q9SAB3|RB45B_ARATH Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana
GN=RBP45B PE=1 SV=1
Length = 405
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 22/183 (12%)
Query: 189 EHPSRTLFVRNINSNVEDSELRALFE-QYGDIRTLYTAC-----KHRGFVMISYYDIRAA 242
+ P T+FV ++ ++V D L F Y ++ + +G+ + + D
Sbjct: 151 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQ 210
Query: 243 RTAMRALQNKPLRRRKLDIHFSIPKDN---------------PSDKDLNQGTLVVFNLDP 287
AM + P R + I + K +D D N T+ V LD
Sbjct: 211 IRAMTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDA 270
Query: 288 SVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLE 347
SV+++ L+ +F YGE+ ++ P + F++F + AE AL+ LN + G ++L
Sbjct: 271 SVTDDHLKNVFSQYGEIVHVK-IPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLS 329
Query: 348 PSR 350
R
Sbjct: 330 WGR 332
>sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS
2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=PAB1 PE=3
SV=1
Length = 661
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 173 SVPNGAGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFE---QYGDIRTLYTAC--K 227
SVP + GE S +L+V +N +V ++ L +F Q IR A K
Sbjct: 47 SVPADSAEEQGESSGIAENSASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKK 106
Query: 228 HRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDP 287
G+ ++Y+ + A+ L P+ R I +S + +PS + G + + NL P
Sbjct: 107 SLGYAYVNYHKLEDGEKAIEELNYTPVEGRPCRIMWS--QRDPSARRSGDGNIFIKNLHP 164
Query: 288 SVSNEDLRQIFGAYGEVKEIR----ETPHKRHHKFIEFYDVRAAEAALKSLN 335
++ N+ L F A+G++ ++ + + F+ + AA+AA++S+N
Sbjct: 165 AIDNKALHDTFSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQAAIESVN 216
>sp|Q4PC17|MRD1_USTMA Multiple RNA-binding domain-containing protein 1 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=MRD1 PE=3 SV=1
Length = 858
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 31/224 (13%)
Query: 175 PNGAGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACK------- 227
P GAG AG+ TL+V+N++ + D L A F D K
Sbjct: 608 PAGAG--AGDEAVD---GATLYVKNLSFSTTDERLTAFFHGLSDFAFARIQTKPDPRRPG 662
Query: 228 ---HRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS---IPKDNPSDKDLNQGTLV 281
G+ + + I AARTA +A+ K L L + F+ S ++
Sbjct: 663 ARLSMGYGFVGFKSIDAARTAQKAMDGKVLDAHTLVVTFARRNAEASTTSISSGGSTKIL 722
Query: 282 VFNLDPSVSNEDLRQIFGAYGEVKEIRETPHK-----RHHKFIEFYDVRAAEAALKSLNR 336
+ NL + D+R +F + G++K +R P K R F+E+ VR A++A+++L
Sbjct: 723 IKNLPFEATKRDIRDLFSSQGQLKSVR-LPKKFDNTTRGFGFVEYSTVREAQSAMEALKH 781
Query: 337 SDIAGKRIKLEPSRPGGARRNLMLQLNQELEQDESRILQHQVGS 380
+ + G+ + L+ S +L Q+++ S+ QH V +
Sbjct: 782 THLLGRHLVLQWS-------HLASSTQQQVDMQRSKTKQHFVNT 818
Score = 38.9 bits (89), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 697 LMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLPIDFKNKCNVGYAFINMLSPLHIIPFYE 756
L I+N+P + +LA + GT +++P+D + K + G AF++ P H + Y
Sbjct: 316 LFIRNLPFAASGDEILAFFESF--GTVKQVHIPLDKQTKASKGLAFVSFSDPAHALAAYR 373
Query: 757 AFNGKKWE 764
A +G ++
Sbjct: 374 AKDGSTFQ 381
>sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=pab1 PE=3 SV=1
Length = 731
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 76/144 (52%), Gaps = 23/144 (15%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTA----CKHRGFVMISYYDIRAARTAMRALQ 250
++++N++S ++D E R +FE++G+I + + K RGF +++ +A+ A+ +
Sbjct: 237 VYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVEEMN 296
Query: 251 NKPLRRRKLDIHFSIPKDNPSDKDLN--------------QGT-LVVFNLDPSVSNEDLR 295
+K +R +KL + + K + +++L QG L V NL + +E LR
Sbjct: 297 DKEIRSQKLYVGRA-QKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEKLR 355
Query: 296 QIFGAYGEV---KEIRETPHKRHH 316
++FG YG + K +R+T +R
Sbjct: 356 ELFGPYGTITSAKVMRDTNVERDQ 379
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKH----RGFVMISYYDIRAARTAMRALQ 250
+F++N++S +++ L F +G+I + A +G+ + Y AA A++ +
Sbjct: 144 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 203
Query: 251 NKPLRRRKLDIHFSIPKDNPSDK----DLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 306
L +K+ + I K + K N + + NLD + +++ R++F +GE+
Sbjct: 204 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITS 263
Query: 307 I---RETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 344
R+ K R F+ F +A+AA++ +N +I +++
Sbjct: 264 ATLSRDQEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKL 305
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query: 192 SRTLFVRNINSNVEDSELRALFE---QYGDIRTLYTACKHR--GFVMISYYDIRAARTAM 246
S +L+V ++ +V ++ L LF Q IR A R G+ ++Y + A+
Sbjct: 53 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 112
Query: 247 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 306
L ++ + I +S + +P+ + QG + + NLD ++ N+ L F A+G +
Sbjct: 113 EDLNYTLIKGKPCRIMWS--QRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS 170
Query: 307 IR----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 344
+ E + + + F+ + AA A+K +N + K++
Sbjct: 171 CKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 212
>sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3
PE=2 SV=1
Length = 660
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHR-----GFVMISYYDIRAART 244
HP+ +L+ +++ V ++ L LF+ ++ ++ C+ + G+ I++ + A
Sbjct: 46 HPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSV-RVCRDQNRRSLGYAYINFSNPNDAYR 104
Query: 245 AMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEV 304
AM AL PL R + I S +PS + +G + + NLD S+ N+ L + F ++G +
Sbjct: 105 AMEALNYTPLFDRPIRIMLS--NRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTI 162
Query: 305 KEIR----ETPHKRHHKFIEFYDVRAAEAALKSLN 335
+ T + + F++F +A+AA+ LN
Sbjct: 163 LSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLN 197
Score = 41.6 bits (96), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 27/184 (14%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYT----ACKHRGFVMISYYDIRAARTAMRAL- 249
++V+N+ + + ELR F ++G I + + R F +++ AA +A+ +
Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMN 290
Query: 250 --------------QNKPLRRRKLDIHFSIPKDNPSDKDLNQGT-LVVFNLDPSVSNEDL 294
Q K R +L F + N +K +QG L + NLD SV +E L
Sbjct: 291 GISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEK--SQGANLYLKNLDDSVDDEKL 348
Query: 295 RQIFGAYGEVK--EIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPG 352
+++F YG V ++ P F F E AL++L S++ GK I +P
Sbjct: 349 KEMFSEYGNVTSSKVMLNPQGMSRGF-GFVAYSNPEEALRAL--SEMNGKMIGRKPLYIA 405
Query: 353 GARR 356
A+R
Sbjct: 406 LAQR 409
Score = 38.1 bits (87), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRT----LYTACKHRGFVMISYYDIRAARTAMRALQ 250
L+++N++ +V+D +L+ +F +YG++ + L RGF ++Y + A A+ +
Sbjct: 334 LYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMN 393
Query: 251 NKPLRRRKLDIHFSIPKDN 269
K + R+ L I + K++
Sbjct: 394 GKMIGRKPLYIALAQRKED 412
>sp|Q4R535|CELF4_MACFA CUGBP Elav-like family member 4 OS=Macaca fascicularis GN=CELF4
PE=2 SV=1
Length = 474
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 28/204 (13%)
Query: 149 ESLSMSMSKISISDSASG--NGLLHYSVPNGAGTVAGEHPYGEHPSRTLFVRNINSNVED 206
++ S+S + + S ++G NGL H P T+ P +H + LF+ I N+++
Sbjct: 14 DNASLSTNGLGSSPGSAGHMNGLSH--SPGNPSTI----PMKDHDAIKLFIGQIPRNLDE 67
Query: 207 SELRALFEQYGDIRTLYTACK------HRGFVMISYYDIRAARTAMRALQNK---PLRRR 257
+L+ LFE++G I L T K H+G ++Y + +A A AL + P R
Sbjct: 68 KDLKPLFEEFGKIYEL-TVLKDRFTGMHKGCAFLTYCERESALKAQSALHEQKTLPGMNR 126
Query: 258 KLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE--IRETP--HK 313
+ + P D+ S D L V L+ S +D+R++F A+G ++E I P +
Sbjct: 127 PIQVK---PADSESRGDRK---LFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNS 180
Query: 314 RHHKFIEFYDVRAAEAALKSLNRS 337
+ F+++ A+AA+ +L+ S
Sbjct: 181 KGCAFVKYSSHAEAQAAINALHGS 204
>sp|Q6CDH3|PABP_YARLI Polyadenylate-binding protein, cytoplasmic and nuclear OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=PAB1 PE=3 SV=1
Length = 629
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 194 TLFVRNINSNVEDSELRALFEQYG---DIRTLYTACKHR--GFVMISYYDIRAARTAMRA 248
+L+V ++ +V ++ L +F G +R A R G+ +++++ A+
Sbjct: 47 SLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQADGIRALEE 106
Query: 249 LQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIR 308
L P++ R I +S + +P+ + G + + NLDP++ N+ L F A+G++ +
Sbjct: 107 LNYSPIKERPCRIMWS--QRDPALRKTGAGNIYIKNLDPAIDNKALHDTFSAFGQILSCK 164
Query: 309 ----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQ 364
E + R F+ + +AE+A++ +N + K++ + P P R +Q +
Sbjct: 165 IATDEFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFVGPHVPKSDR----MQSFE 220
Query: 365 ELEQDESRILQHQVGSPITNS 385
E + + + +G+ IT +
Sbjct: 221 EQKNSFTNVFIKNLGTEITEA 241
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 89/208 (42%), Gaps = 25/208 (12%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTAC----KHRGFVMISYYDIRAARTAMRALQ 250
+F++N+ + + ++E L ++G+ +++ + K GF + Y + A A+ L
Sbjct: 229 VFIKNLGTEITEAEFEELVNKFGETSSVHLSTNDEGKPTGFGFVDYKEHDVAVKAIDGLS 288
Query: 251 NKPLRRRKLDIHFSIPKDNPSD-----------KDLN--QGT-LVVFNLDPSVSNEDLRQ 296
+ KL + K +D + LN QG L + NLD ++ ++ LR
Sbjct: 289 ETEFKGNKLFAGRAKKKYERADELRKQYEASRLEKLNKYQGVNLYIKNLDDTIDDDKLRA 348
Query: 297 IFGAYGEVKE----IRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPG 352
F +G + + E + F+ + A A+ +N +AGK + + ++
Sbjct: 349 EFAPHGTITSAKVMVDEAGKSKGFGFVCYSSPEEATKAVTEMNHRLVAGKPLYVVLAQRK 408
Query: 353 GARRNLMLQLNQELEQDESRILQHQVGS 380
RR+ QL Q+++ LQ Q +
Sbjct: 409 DVRRS---QLQQQIQAKNQMRLQQQAAA 433
>sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2
PE=1 SV=1
Length = 629
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTA----CKHRGFVMISYYDIRAARTAMRAL- 249
++V+N+ + D +L+ F +YG I + K +GF +++ + A A+ +L
Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLN 276
Query: 250 --------------QNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLR 295
Q K R +L + + +DK L V NLDPS+S+E L+
Sbjct: 277 GHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADK-FQSSNLYVKNLDPSISDEKLK 335
Query: 296 QIFGAYGEVK--EIRETPH--KRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351
+IF +G V ++ P+ + F+ F A A+ S ++GK I+ +P
Sbjct: 336 EIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAM-----SQLSGKMIESKPLYV 390
Query: 352 GGARR--NLMLQLNQELEQDESRILQHQVGSPITNSPPG 388
A+R + ++L + Q +Q VG + PPG
Sbjct: 391 AIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRMPVYPPG 429
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 83/165 (50%), Gaps = 13/165 (7%)
Query: 194 TLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHR------GFVMISYYDIRAARTAMR 247
+L+V +++ NV DS+L F Q G + T+ C+ G+ +++ + + A A++
Sbjct: 37 SLYVGDLDFNVTDSQLFDAFGQMGTVVTV-RVCRDLVTRRSLGYGYVNFTNPQDAARAIQ 95
Query: 248 ALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEI 307
L PL + + + +S +PS + G + + NLD S+ ++ L F ++G +
Sbjct: 96 ELNYIPLYGKPIRVMYS--HRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSC 153
Query: 308 R----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEP 348
+ + + + F+++ + +A+ A++ LN + K++ + P
Sbjct: 154 KVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGP 198
>sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 /
DSM 816 / NCTC 3887 / NRRL 1) GN=pab1 PE=3 SV=1
Length = 754
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 24/143 (16%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTA----CKHRGFVMISYYDIRAARTAMRALQ 250
++++NI+ +V + E R +FEQ+G+I + + K RGF ++Y +A+ A+ +
Sbjct: 234 IYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGKSRGFGFVNYSTHESAQAAVDEMH 293
Query: 251 NKPLRRRKLDIHFSIPKDNPSDKDLN--------------QGT-LVVFNLDPSVSNEDLR 295
+K ++ +KL + + K + +++L QG L V NL V +E LR
Sbjct: 294 DKEVKTQKLYVGRA-QKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLR 352
Query: 296 QIFGAYGEV---KEIRE-TPHKR 314
++FG YG + K +R+ TP +R
Sbjct: 353 ELFGPYGTITSAKVMRDSTPAER 375
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKH----RGFVMISYYDIRAARTAMRALQ 250
+F++N++S +++ L F +G+I + A +G+ + Y AA A++ +
Sbjct: 141 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 200
Query: 251 NKPLRRRKLDIHFSIPKDNPSDK----DLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 306
L +K+ + I K + K N + + N+DP V+ E+ R+IF +GE+
Sbjct: 201 GMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEITS 260
Query: 307 I---RETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 344
R+ K R F+ + +A+AA+ ++ ++ +++
Sbjct: 261 ATLSRDPEGKSRGFGFVNYSTHESAQAAVDEMHDKEVKTQKL 302
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query: 192 SRTLFVRNINSNVEDSELRALFE---QYGDIRTLYTACKHR--GFVMISYYDIRAARTAM 246
S +L+V ++ +V ++ L LF Q IR A R G+ ++Y + A+
Sbjct: 50 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 109
Query: 247 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 306
L ++ + I +S + +P+ + QG + + NLD ++ N+ L F A+G +
Sbjct: 110 EDLNYTLIKGKPCRIMWS--QRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS 167
Query: 307 IR----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 344
+ E + + + F+ + AA A+K +N + K++
Sbjct: 168 CKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 209
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIR-----ETPHKRHHKFIEFYDVRAAEAALK 332
+L V LDPSV+ L ++F + G+V IR T + ++ + + E AL+
Sbjct: 51 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 110
Query: 333 SLNRSDIAGKRIKL 346
LN + I GK ++
Sbjct: 111 DLNYTLIKGKPCRI 124
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 349,111,285
Number of Sequences: 539616
Number of extensions: 16370289
Number of successful extensions: 31977
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 634
Number of HSP's that attempted gapping in prelim test: 30518
Number of HSP's gapped (non-prelim): 1623
length of query: 858
length of database: 191,569,459
effective HSP length: 126
effective length of query: 732
effective length of database: 123,577,843
effective search space: 90458981076
effective search space used: 90458981076
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)