Query 003009
Match_columns 858
No_of_seqs 587 out of 3323
Neff 6.2
Searched_HMMs 13730
Date Mon Mar 25 09:56:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003009.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/003009hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u1qa_ d.58.7.1 (A:) Nuclear 99.9 2.6E-25 1.9E-29 220.7 18.1 161 192-354 6-178 (183)
2 d1u1qa_ d.58.7.1 (A:) Nuclear 99.7 1.7E-17 1.3E-21 163.6 13.0 154 114-268 6-177 (183)
3 d1b7fa1 d.58.7.1 (A:123-204) S 99.6 1.8E-16 1.3E-20 137.1 9.3 76 277-352 2-82 (82)
4 d1b7fa1 d.58.7.1 (A:123-204) S 99.6 2.6E-16 1.9E-20 135.9 9.2 75 192-266 2-81 (82)
5 d2cq0a1 d.58.7.1 (A:231-320) E 99.6 3.5E-16 2.6E-20 137.9 10.1 78 276-353 7-89 (90)
6 d1fxla1 d.58.7.1 (A:37-118) Hu 99.6 4.4E-16 3.2E-20 134.4 9.7 75 192-266 2-81 (82)
7 d1fxla1 d.58.7.1 (A:37-118) Hu 99.6 4.7E-16 3.4E-20 134.2 9.6 74 278-351 3-81 (82)
8 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.6 6.5E-16 4.7E-20 137.1 10.4 78 276-353 8-90 (93)
9 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.6 6.6E-16 4.8E-20 135.6 9.4 79 189-267 4-87 (88)
10 d1x5ua1 d.58.7.1 (A:7-99) Spli 99.6 1.2E-15 8.6E-20 135.4 11.1 79 190-268 7-90 (93)
11 d1rk8a_ d.58.7.1 (A:) RNA-bind 99.6 7E-16 5.1E-20 135.4 9.5 79 275-353 5-88 (88)
12 d2cqba1 d.58.7.1 (A:1-89) Pept 99.6 5.2E-16 3.8E-20 136.5 8.6 78 277-354 5-87 (89)
13 d2cq0a1 d.58.7.1 (A:231-320) E 99.6 8.6E-16 6.3E-20 135.3 9.5 80 189-268 5-89 (90)
14 d2cpza1 d.58.7.1 (A:383-484) C 99.6 1.1E-15 7.8E-20 138.0 10.1 80 276-355 17-101 (102)
15 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.6 1.2E-15 8.6E-20 135.4 10.1 80 276-355 6-90 (93)
16 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.6 1.5E-15 1.1E-19 133.7 10.5 81 275-355 6-89 (90)
17 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.6 1.7E-15 1.2E-19 131.4 10.5 76 275-350 6-82 (83)
18 d1cvja2 d.58.7.1 (A:91-179) Po 99.6 3.8E-16 2.8E-20 137.3 6.3 78 277-354 8-88 (89)
19 d2cqba1 d.58.7.1 (A:1-89) Pept 99.6 6.1E-16 4.4E-20 136.0 7.5 79 190-268 3-86 (89)
20 d2cpha1 d.58.7.1 (A:454-547) P 99.6 2.2E-15 1.6E-19 133.9 11.1 78 276-353 7-91 (94)
21 d2cpha1 d.58.7.1 (A:454-547) P 99.6 2.5E-15 1.8E-19 133.5 11.3 80 189-268 5-91 (94)
22 d2f9da1 d.58.7.1 (A:12-125) Pr 99.6 2.2E-15 1.6E-19 138.1 11.3 99 277-379 7-107 (114)
23 d1cvja1 d.58.7.1 (A:11-90) Pol 99.6 1.2E-15 8.8E-20 131.4 8.7 73 279-351 2-79 (80)
24 d1fjca_ d.58.7.1 (A:) Nucleoli 99.6 1.1E-15 7.8E-20 136.3 8.4 80 276-355 15-94 (96)
25 d1no8a_ d.58.7.1 (A:) Nuclear 99.6 1.8E-15 1.3E-19 129.7 9.5 73 278-350 1-77 (78)
26 d2ghpa1 d.58.7.1 (A:116-196) U 99.6 9.4E-16 6.8E-20 132.2 7.7 74 278-351 2-80 (81)
27 d2f9da1 d.58.7.1 (A:12-125) Pr 99.6 8.6E-16 6.2E-20 140.9 7.8 102 190-303 5-108 (114)
28 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 99.6 2.5E-15 1.8E-19 133.2 10.5 78 190-267 5-87 (93)
29 d2cq3a1 d.58.7.1 (A:110-202) R 99.6 3.5E-15 2.6E-19 132.2 11.3 79 275-353 9-90 (93)
30 d1whwa_ d.58.7.1 (A:) Probable 99.6 3.7E-15 2.7E-19 133.5 11.5 81 190-270 6-91 (99)
31 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.6 1.5E-15 1.1E-19 133.4 8.3 80 276-355 4-88 (90)
32 d2u2fa_ d.58.7.1 (A:) Splicing 99.6 2.2E-15 1.6E-19 131.4 9.0 75 279-353 3-82 (85)
33 d2cpza1 d.58.7.1 (A:383-484) C 99.6 2.6E-15 1.9E-19 135.4 9.7 79 191-269 17-100 (102)
34 d2b0ga1 d.58.7.1 (A:1-83) Spli 99.6 4.5E-15 3.3E-19 128.6 10.7 77 189-265 5-82 (83)
35 d1fxla2 d.58.7.1 (A:119-203) H 99.6 3E-15 2.2E-19 130.5 9.4 75 275-349 4-85 (85)
36 d1whwa_ d.58.7.1 (A:) Probable 99.6 4.4E-15 3.2E-19 132.9 10.7 78 276-353 7-89 (99)
37 d2cq3a1 d.58.7.1 (A:110-202) R 99.6 6.9E-15 5E-19 130.3 11.8 80 189-268 8-90 (93)
38 d1b7fa2 d.58.7.1 (A:205-289) S 99.6 3.5E-15 2.6E-19 129.9 9.7 75 275-349 4-85 (85)
39 d2adca1 d.58.7.1 (A:335-443) P 99.6 8E-16 5.8E-20 139.8 5.7 77 277-353 2-79 (109)
40 d2cqia1 d.58.7.1 (A:1-90) Nucl 99.6 4.5E-15 3.3E-19 130.6 10.4 80 189-268 5-87 (90)
41 d2cpfa1 d.58.7.1 (A:362-446) P 99.6 3.4E-15 2.4E-19 129.8 9.4 75 195-269 1-83 (85)
42 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.6 4.6E-15 3.4E-19 140.8 11.1 81 189-269 39-124 (139)
43 d1u6fa1 d.58.7.1 (A:1-139) RNA 99.6 3.6E-15 2.7E-19 141.5 10.3 79 277-355 42-125 (139)
44 d1whxa_ d.58.7.1 (A:) Probable 99.6 2.3E-15 1.7E-19 137.0 8.5 78 189-267 7-84 (111)
45 d2ghpa1 d.58.7.1 (A:116-196) U 99.6 2E-15 1.5E-19 130.1 7.4 74 193-266 2-80 (81)
46 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.6 4E-15 2.9E-19 132.7 9.6 77 276-353 17-93 (96)
47 d2cpfa1 d.58.7.1 (A:362-446) P 99.6 3E-15 2.2E-19 130.1 8.4 74 280-353 1-82 (85)
48 d2u2fa_ d.58.7.1 (A:) Splicing 99.6 3.9E-15 2.8E-19 129.8 8.8 76 193-268 2-82 (85)
49 d1x5sa1 d.58.7.1 (A:8-97) Cold 99.5 3.9E-15 2.8E-19 130.8 8.9 78 191-268 4-86 (90)
50 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.5 7.3E-15 5.3E-19 130.6 10.8 77 276-352 13-91 (95)
51 d1b7fa2 d.58.7.1 (A:205-289) S 99.5 6.7E-15 4.9E-19 128.1 10.2 75 190-264 4-85 (85)
52 d1wf2a_ d.58.7.1 (A:) Heteroge 99.5 5.8E-15 4.2E-19 132.3 10.0 75 276-353 14-89 (98)
53 d1cvja1 d.58.7.1 (A:11-90) Pol 99.5 4.1E-15 3E-19 128.1 8.5 72 194-265 2-78 (80)
54 d1fjca_ d.58.7.1 (A:) Nucleoli 99.5 2.3E-15 1.7E-19 134.1 7.1 81 189-269 13-93 (96)
55 d2cpda1 d.58.7.1 (A:223-308) A 99.5 4.7E-15 3.4E-19 129.3 8.7 77 192-269 8-84 (86)
56 d2cqda1 d.58.7.1 (A:1-103) RNA 99.5 7.1E-15 5.2E-19 132.7 10.2 80 274-354 7-91 (103)
57 d1p1ta_ d.58.7.1 (A:) Cleavage 99.5 1.7E-15 1.3E-19 136.8 6.1 79 189-267 5-88 (104)
58 d2cqca1 d.58.7.1 (A:109-191) A 99.5 7.2E-15 5.2E-19 127.2 9.6 71 276-346 8-83 (83)
59 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.5 3.3E-15 2.4E-19 129.3 7.4 75 280-354 1-81 (83)
60 d1cvja2 d.58.7.1 (A:91-179) Po 99.5 3.7E-15 2.7E-19 130.9 7.8 77 192-268 8-87 (89)
61 d1fxla2 d.58.7.1 (A:119-203) H 99.5 7.7E-15 5.6E-19 127.8 9.8 73 192-264 6-85 (85)
62 d1x4aa1 d.58.7.1 (A:9-103) Spl 99.5 1.2E-14 9E-19 129.1 11.2 79 189-267 11-91 (95)
63 d2adca1 d.58.7.1 (A:335-443) P 99.5 1.1E-14 7.7E-19 132.2 10.9 77 192-268 2-79 (109)
64 d2adca2 d.58.7.1 (A:444-531) P 99.5 8.8E-15 6.4E-19 128.1 9.9 77 190-266 8-86 (88)
65 d1no8a_ d.58.7.1 (A:) Nuclear 99.5 6.6E-15 4.8E-19 126.2 8.8 72 194-265 2-77 (78)
66 d2cpda1 d.58.7.1 (A:223-308) A 99.5 7.1E-15 5.2E-19 128.1 9.1 77 277-354 8-84 (86)
67 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.5 1.5E-14 1.1E-18 130.0 11.4 78 189-266 15-96 (101)
68 d2cpja1 d.58.7.1 (A:65-150) No 99.5 6.6E-15 4.8E-19 128.7 8.6 76 277-353 8-83 (86)
69 d2ghpa3 d.58.7.1 (A:206-291) U 99.5 5.9E-15 4.3E-19 128.8 8.3 76 276-352 3-85 (86)
70 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.5 1.4E-14 9.9E-19 128.9 10.8 80 189-268 5-95 (98)
71 d2adca2 d.58.7.1 (A:444-531) P 99.5 1E-14 7.5E-19 127.6 9.8 77 276-352 9-87 (88)
72 d1p1ta_ d.58.7.1 (A:) Cleavage 99.5 4.3E-15 3.1E-19 134.1 7.5 78 277-354 8-90 (104)
73 d1whxa_ d.58.7.1 (A:) Probable 99.5 6.9E-15 5E-19 133.8 8.9 75 277-352 10-84 (111)
74 d2cq4a1 d.58.7.1 (A:132-232) R 99.5 2.7E-15 2E-19 135.2 6.0 76 276-352 17-97 (101)
75 d2cqca1 d.58.7.1 (A:109-191) A 99.5 8.1E-15 5.9E-19 126.9 8.7 72 190-261 7-83 (83)
76 d1x4ga1 d.58.7.1 (A:8-103) Nuc 99.5 1.2E-14 8.4E-19 129.7 9.9 76 191-267 17-92 (96)
77 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.5 2.2E-15 1.6E-19 129.9 5.0 76 279-355 3-79 (80)
78 d2cqga1 d.58.7.1 (A:96-185) TA 99.5 1.4E-14 1E-18 127.8 10.0 78 190-269 6-88 (90)
79 d2cqda1 d.58.7.1 (A:1-103) RNA 99.5 1.4E-14 1E-18 130.7 10.3 80 190-270 8-92 (103)
80 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.5 4E-15 2.9E-19 130.5 6.1 79 190-270 3-81 (88)
81 d1nu4a_ d.58.7.1 (A:) Spliceso 99.5 8.2E-15 6E-19 129.2 8.1 79 190-268 1-85 (91)
82 d2disa1 d.58.7.1 (A:8-103) Hyp 99.5 1.5E-14 1.1E-18 128.7 9.7 82 192-273 1-91 (96)
83 d1wf0a_ d.58.7.1 (A:) TAR DNA- 99.5 4.3E-15 3.2E-19 130.3 6.1 76 277-354 5-80 (88)
84 d2cqga1 d.58.7.1 (A:96-185) TA 99.5 1.6E-14 1.2E-18 127.3 9.6 77 276-354 7-88 (90)
85 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.5 9.3E-15 6.8E-19 125.5 7.7 73 277-352 5-77 (79)
86 d2cqha1 d.58.7.1 (A:2-81) IGF- 99.5 3.6E-15 2.6E-19 128.5 4.9 76 193-269 2-78 (80)
87 d2cpja1 d.58.7.1 (A:65-150) No 99.5 1.7E-14 1.2E-18 126.1 9.2 77 191-268 7-83 (86)
88 d1x5ta1 d.58.7.1 (A:8-90) Spli 99.5 6.5E-15 4.7E-19 127.4 6.5 74 195-268 1-80 (83)
89 d2cpea1 d.58.7.1 (A:353-453) R 99.5 1.1E-14 7.8E-19 130.4 8.1 80 275-354 6-98 (101)
90 d1x4ba1 d.58.7.1 (A:8-110) Het 99.5 9.9E-15 7.2E-19 132.0 7.8 77 277-354 20-101 (103)
91 d1x4ha1 d.58.7.1 (A:8-105) RNA 99.5 3.1E-14 2.2E-18 126.6 10.9 77 277-353 8-95 (98)
92 d1x5oa1 d.58.7.1 (A:8-108) RNA 99.5 1.2E-14 9E-19 130.6 8.2 77 276-352 17-97 (101)
93 d2bz2a1 d.58.7.1 (A:35-113) Ne 99.5 1.6E-14 1.1E-18 124.1 8.3 75 190-267 3-77 (79)
94 d2ghpa3 d.58.7.1 (A:206-291) U 99.5 9.2E-15 6.7E-19 127.6 6.8 76 191-267 3-85 (86)
95 d2cpxa1 d.58.7.1 (A:291-392) R 99.5 8.2E-15 6E-19 131.5 6.6 80 190-269 16-100 (102)
96 d1nu4a_ d.58.7.1 (A:) Spliceso 99.5 1.2E-14 8.7E-19 128.2 7.4 78 277-354 3-86 (91)
97 d2cpxa1 d.58.7.1 (A:291-392) R 99.5 8.7E-15 6.3E-19 131.3 6.6 80 276-355 17-101 (102)
98 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.5 3.1E-14 2.2E-18 123.8 9.9 74 276-350 5-83 (84)
99 d1uawa_ d.58.7.1 (A:) Musashi- 99.5 9.5E-15 6.9E-19 125.1 6.2 71 278-349 1-76 (77)
100 d1hd0a_ d.58.7.1 (A:) Heteroge 99.5 2.3E-14 1.7E-18 121.8 8.6 70 279-349 1-75 (75)
101 d1wf2a_ d.58.7.1 (A:) Heteroge 99.5 2.6E-14 1.9E-18 128.0 9.3 76 190-268 13-89 (98)
102 d2cpea1 d.58.7.1 (A:353-453) R 99.5 1.7E-14 1.2E-18 129.1 8.1 81 188-268 4-97 (101)
103 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.5 3.7E-14 2.7E-18 120.7 9.5 72 280-353 1-72 (75)
104 d1x4ba1 d.58.7.1 (A:8-110) Het 99.5 2.2E-14 1.6E-18 129.6 7.9 77 192-269 20-101 (103)
105 d1hd0a_ d.58.7.1 (A:) Heteroge 99.5 4.1E-14 3E-18 120.3 9.2 70 194-264 1-75 (75)
106 d1l3ka1 d.58.7.1 (A:8-91) Nucl 99.5 3.9E-14 2.9E-18 123.1 9.0 74 191-265 5-83 (84)
107 d2msta_ d.58.7.1 (A:) Neural R 99.5 2.8E-14 2E-18 120.7 7.7 70 279-349 1-75 (75)
108 d1whya_ d.58.7.1 (A:) Putative 99.5 6.1E-14 4.4E-18 125.1 10.3 77 276-353 16-94 (97)
109 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.5 1E-14 7.3E-19 128.9 5.0 76 276-352 12-91 (91)
110 d3begb1 d.58.7.1 (B:121-207) S 99.5 1.8E-14 1.3E-18 126.0 6.4 72 279-352 2-73 (87)
111 d2adba1 d.58.7.1 (A:177-284) P 99.5 2.2E-14 1.6E-18 130.4 7.2 77 277-353 7-86 (108)
112 d2adba1 d.58.7.1 (A:177-284) P 99.5 4.4E-14 3.2E-18 128.4 9.3 81 189-269 4-87 (108)
113 d1wg4a_ d.58.7.1 (A:) Splicing 99.5 5.4E-14 4E-18 125.8 9.7 79 188-268 11-89 (98)
114 d1whya_ d.58.7.1 (A:) Putative 99.5 7.2E-14 5.2E-18 124.6 10.4 77 190-267 15-93 (97)
115 d1l3ka2 d.58.7.1 (A:103-181) N 99.5 5.1E-14 3.7E-18 120.5 9.0 71 278-349 3-78 (79)
116 d1wg1a_ d.58.7.1 (A:) Probable 99.5 3.3E-14 2.4E-18 124.6 8.0 76 191-268 4-79 (88)
117 d1wg1a_ d.58.7.1 (A:) Probable 99.5 1.9E-14 1.4E-18 126.2 6.4 75 277-353 5-79 (88)
118 d1l3ka2 d.58.7.1 (A:103-181) N 99.5 5.2E-14 3.8E-18 120.4 8.9 72 192-264 2-78 (79)
119 d2cq4a1 d.58.7.1 (A:132-232) R 99.5 1.1E-14 7.9E-19 131.2 4.5 75 191-266 17-96 (101)
120 d1uawa_ d.58.7.1 (A:) Musashi- 99.5 1.6E-14 1.2E-18 123.6 5.2 71 193-264 1-76 (77)
121 d2cq1a1 d.58.7.1 (A:51-138) Po 99.5 1.1E-13 8.2E-18 120.9 10.4 79 189-268 5-85 (88)
122 d1fjeb1 d.58.7.1 (B:1-91) Nucl 99.5 9.9E-15 7.2E-19 128.9 3.5 77 190-267 11-91 (91)
123 d1wi6a1 d.58.7.1 (A:69-143) Ri 99.4 8E-14 5.8E-18 118.5 8.9 71 195-267 1-71 (75)
124 d3begb1 d.58.7.1 (B:121-207) S 99.4 4.3E-14 3.2E-18 123.5 7.4 74 193-268 1-74 (87)
125 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.4 1.3E-13 9.8E-18 124.0 10.4 79 190-270 13-97 (104)
126 d2cpia1 d.58.7.1 (A:101-189) E 99.4 6.9E-14 5E-18 122.9 8.2 71 277-347 8-89 (89)
127 d2disa1 d.58.7.1 (A:8-103) Hyp 99.4 8.3E-14 6E-18 123.8 8.8 77 278-354 2-87 (96)
128 d1zh5a2 d.58.7.1 (A:105-189) L 99.4 6.7E-14 4.9E-18 121.9 7.8 74 276-350 5-82 (85)
129 d1x0fa1 d.58.7.1 (A:183-257) N 99.4 3.8E-14 2.8E-18 120.7 6.0 70 279-349 1-75 (75)
130 d1wexa_ d.58.7.1 (A:) Heteroge 99.4 3.7E-13 2.7E-17 121.4 12.8 81 188-269 11-93 (104)
131 d2msta_ d.58.7.1 (A:) Neural R 99.4 5.7E-14 4.1E-18 118.7 6.8 70 194-264 1-75 (75)
132 d1wg4a_ d.58.7.1 (A:) Splicing 99.4 6.3E-14 4.6E-18 125.4 7.1 76 276-353 14-89 (98)
133 d1wi8a_ d.58.7.1 (A:) Eukaryot 99.4 2.1E-13 1.5E-17 122.8 10.5 77 276-354 14-96 (104)
134 d2ghpa2 d.58.7.1 (A:41-115) U4 99.4 1.4E-13 9.8E-18 117.1 8.7 71 278-349 1-74 (75)
135 d2cq1a1 d.58.7.1 (A:51-138) Po 99.4 2.1E-13 1.5E-17 119.2 10.1 79 274-353 5-85 (88)
136 d1x0fa1 d.58.7.1 (A:183-257) N 99.4 7E-14 5.1E-18 119.1 6.7 70 194-264 1-75 (75)
137 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.4 4.6E-14 3.4E-18 118.6 5.2 66 280-345 1-71 (72)
138 d1zh5a2 d.58.7.1 (A:105-189) L 99.4 1.6E-13 1.1E-17 119.5 8.8 73 191-264 5-81 (85)
139 d1x4ea1 d.58.7.1 (A:8-79) RNA- 99.4 1.2E-13 8.9E-18 116.0 6.9 66 195-260 1-71 (72)
140 d1wexa_ d.58.7.1 (A:) Heteroge 99.4 6.3E-13 4.6E-17 119.8 11.5 78 275-353 13-92 (104)
141 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.4 3.5E-13 2.5E-17 120.6 9.3 77 276-353 17-96 (99)
142 d2cqpa1 d.58.7.1 (A:917-1002) 99.4 2E-13 1.4E-17 118.7 7.0 74 276-349 8-86 (86)
143 d1weya_ d.58.7.1 (A:) Calcipre 99.4 2.4E-13 1.7E-17 123.0 7.5 79 276-355 4-87 (104)
144 d2ghpa2 d.58.7.1 (A:41-115) U4 99.4 4.7E-13 3.4E-17 113.7 8.3 71 193-264 1-74 (75)
145 d2cqpa1 d.58.7.1 (A:917-1002) 99.4 2.1E-13 1.5E-17 118.5 5.9 75 190-264 7-86 (86)
146 d1weza_ d.58.7.1 (A:) Heteroge 99.4 4.8E-13 3.5E-17 120.2 8.0 77 276-354 14-94 (102)
147 d1x4da1 d.58.7.1 (A:8-96) Matr 99.4 7.2E-13 5.2E-17 116.3 9.0 79 188-267 4-85 (89)
148 d1wg5a_ d.58.7.1 (A:) Heteroge 99.4 1E-12 7.5E-17 118.3 10.2 77 276-353 14-95 (104)
149 d1x4fa1 d.58.7.1 (A:8-106) Mat 99.4 5.4E-13 3.9E-17 119.4 8.3 79 189-268 15-96 (99)
150 d1x4da1 d.58.7.1 (A:8-96) Matr 99.4 1.1E-12 8E-17 115.1 10.1 76 276-352 7-85 (89)
151 d1wg5a_ d.58.7.1 (A:) Heteroge 99.3 1.5E-12 1.1E-16 117.2 11.0 79 189-268 12-95 (104)
152 d2cpia1 d.58.7.1 (A:101-189) E 99.3 2.8E-13 2E-17 118.9 5.7 72 191-262 7-89 (89)
153 d1weza_ d.58.7.1 (A:) Heteroge 99.3 1.1E-12 7.9E-17 117.8 8.7 80 188-268 11-93 (102)
154 d1weya_ d.58.7.1 (A:) Calcipre 99.3 6.4E-13 4.6E-17 120.1 5.6 79 190-269 3-86 (104)
155 d2cpya1 d.58.7.1 (A:536-638) R 99.3 1.6E-12 1.1E-16 116.8 6.0 74 277-351 8-86 (103)
156 d2cpya1 d.58.7.1 (A:536-638) R 99.2 1.8E-12 1.3E-16 116.3 5.3 75 190-265 6-85 (103)
157 d1u2fa_ d.58.7.1 (A:) Splicing 99.2 2.9E-13 2.1E-17 118.7 -0.7 72 193-265 2-83 (90)
158 d1jmta_ d.58.7.3 (A:) d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93 E-value=2.6e-25 Score=220.66 Aligned_cols=161 Identities=20% Similarity=0.388 Sum_probs=138.0
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCC
Q 003009 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 266 (858)
Q Consensus 192 s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~p 266 (858)
.|+|||+|||+++|+++|+++|++||+|..+.+ +++++|||||+|.+.++|++|+.. .+..+..+.+.+.+..+
T Consensus 6 ~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~-~~~~~~~~~~~~~~~~~ 84 (183)
T d1u1qa_ 6 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA-RPHKVDGRVVEPKRAVS 84 (183)
T ss_dssp HHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHT-CSCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHh-cCCcccccchhhhhhhh
Confidence 389999999999999999999999999999874 678899999999999999999984 56667777777766544
Q ss_pred CCCC--CCCCCCccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCcc
Q 003009 267 KDNP--SDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDI 339 (858)
Q Consensus 267 k~~~--~~~~~~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i 339 (858)
+... .......++|||+|||..+|+++|+++|+.||.|..+.+ ++.++|||||+|.+.++|.+|++ +++..+
T Consensus 85 ~~~~~~~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~ 163 (183)
T d1u1qa_ 85 REDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTV 163 (183)
T ss_dssp TTGGGSTTTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEE
T ss_pred cccccccccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeE
Confidence 3321 222345578999999999999999999999999999976 35678999999999999999997 789999
Q ss_pred CCceEEEEecCCCcc
Q 003009 340 AGKRIKLEPSRPGGA 354 (858)
Q Consensus 340 ~Gr~I~V~~s~~~~~ 354 (858)
.|++|+|+++.++..
T Consensus 164 ~G~~i~V~~A~~k~e 178 (183)
T d1u1qa_ 164 NGHNCEVRKALSKQE 178 (183)
T ss_dssp TTEEEEEEECCCHHH
T ss_pred CCEEEEEEecCCccc
Confidence 999999999987653
No 2
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=1.7e-17 Score=163.56 Aligned_cols=154 Identities=18% Similarity=0.292 Sum_probs=121.8
Q ss_pred cceeeeccCCCCCChHHHHHHhcCCCcE---EEEecCccccccceEEeeecCccccCcc---cccccCCC-------Ccc
Q 003009 114 MDDFDLRGLPSSLEDLEDYDIFGSGGGM---ELEGEPQESLSMSMSKISISDSASGNGL---LHYSVPNG-------AGT 180 (858)
Q Consensus 114 ~~el~V~~Lp~~~~E~el~~lFs~~G~i---~V~~d~~esa~~a~~~v~~~~~~~a~~~---~~~~l~n~-------v~~ 180 (858)
++++||++||.++++.+++++|+.+|.| .+..+......++++++.|.+...+... ....+... ...
T Consensus 6 ~r~lfV~nLp~~~te~~L~~~F~~~G~v~~~~~~~~~~~~~~~g~afv~f~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~ 85 (183)
T d1u1qa_ 6 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSR 85 (183)
T ss_dssp HHEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCEETTEECEEEECCCT
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHcCCEEEEEeeecccCCCccCceecccCCHHHHHHHHHhcCCcccccchhhhhhhhc
Confidence 4789999999999999999999999987 5556666778889999998887665421 11111111 001
Q ss_pred ccCCCCCCCCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccc
Q 003009 181 VAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLR 255 (858)
Q Consensus 181 ~sg~~~~~~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~ 255 (858)
............++|||+|||..+|+++|+++|+.||.|..+.+ +++++|||||+|.+.++|++|+. +++..+.
T Consensus 86 ~~~~~~~~~~~~~~i~V~~lp~~~te~~L~~~f~~~G~v~~~~i~~~~~~~~~~g~~fV~f~~~e~A~~Al~-~~~~~~~ 164 (183)
T d1u1qa_ 86 EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVN 164 (183)
T ss_dssp TGGGSTTTTCCCSEEEEECCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHT-SSCEEET
T ss_pred ccccccccccccceeEEccCCCcCCHHHHhhhhccCCceeeeeeecccccCccceeEEEEECCHHHHHHHHH-hCCCeEC
Confidence 11122234556789999999999999999999999999999874 46789999999999999999997 7889999
Q ss_pred cccccccccCCCC
Q 003009 256 RRKLDIHFSIPKD 268 (858)
Q Consensus 256 gr~L~V~~a~pk~ 268 (858)
|++|.|.+|.++.
T Consensus 165 G~~i~V~~A~~k~ 177 (183)
T d1u1qa_ 165 GHNCEVRKALSKQ 177 (183)
T ss_dssp TEEEEEEECCCHH
T ss_pred CEEEEEEecCCcc
Confidence 9999999997753
No 3
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.64 E-value=1.8e-16 Score=137.05 Aligned_cols=76 Identities=28% Similarity=0.436 Sum_probs=70.9
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~ 351 (858)
+++|||+|||.++|+++|+++|++||.|+++++ ++.++|||||+|.+.++|++|++.|||..+.|+.|+|+|++|
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 357999999999999999999999999999986 345789999999999999999999999999999999999987
Q ss_pred C
Q 003009 352 G 352 (858)
Q Consensus 352 ~ 352 (858)
+
T Consensus 82 g 82 (82)
T d1b7fa1 82 G 82 (82)
T ss_dssp C
T ss_pred C
Confidence 5
No 4
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.63 E-value=2.6e-16 Score=135.94 Aligned_cols=75 Identities=23% Similarity=0.450 Sum_probs=71.1
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCC
Q 003009 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 266 (858)
Q Consensus 192 s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~p 266 (858)
+++|||+|||.++++++|+++|++||+|.++++ +++++|||||+|.+.++|++|++.|+|..+.|++|+|+||+|
T Consensus 2 ~t~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~A~~ai~~lng~~~~g~~l~v~~a~p 81 (82)
T d1b7fa1 2 NTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARP 81 (82)
T ss_dssp CSEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeecccCCccccceEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 578999999999999999999999999999884 567899999999999999999999999999999999999976
No 5
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=3.5e-16 Score=137.86 Aligned_cols=78 Identities=22% Similarity=0.357 Sum_probs=72.7
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~ 350 (858)
..++|||+|||.++|+++|+++|++||.|.+|++ ++.++|||||+|.+.++|++|++.|||..++|+.|+|+|++
T Consensus 7 ~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~ak 86 (90)
T d2cq0a1 7 DNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEWAK 86 (90)
T ss_dssp SSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEESS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEeee
Confidence 4578999999999999999999999999999976 45678999999999999999999999999999999999999
Q ss_pred CCc
Q 003009 351 PGG 353 (858)
Q Consensus 351 ~~~ 353 (858)
|+.
T Consensus 87 p~~ 89 (90)
T d2cq0a1 87 PST 89 (90)
T ss_dssp CCC
T ss_pred CCC
Confidence 864
No 6
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=4.4e-16 Score=134.41 Aligned_cols=75 Identities=23% Similarity=0.478 Sum_probs=70.9
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCC
Q 003009 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 266 (858)
Q Consensus 192 s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~p 266 (858)
.++|||+|||.++++++|+++|++||+|..|++ .++++|||||+|.+.++|++|++.|+|..+.|++|+|.||+|
T Consensus 2 ~t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 2 KTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 578999999999999999999999999999884 467899999999999999999999999999999999999976
No 7
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=4.7e-16 Score=134.25 Aligned_cols=74 Identities=30% Similarity=0.515 Sum_probs=69.7
Q ss_pred cceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 003009 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (858)
Q Consensus 278 ~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~ 351 (858)
++|||+|||.++++++|+++|++||.|.+|++ .+.++|||||+|.+.++|++|++.|||..+.|++|+|+|++|
T Consensus 3 t~l~V~nLp~~~te~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afv~f~~~~~a~~a~~~l~g~~~~g~~l~v~~AkP 81 (82)
T d1fxla1 3 TNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP 81 (82)
T ss_dssp SEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCcccccceeeccCCCceeeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeeC
Confidence 57999999999999999999999999999986 356789999999999999999999999999999999999987
No 8
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.62 E-value=6.5e-16 Score=137.10 Aligned_cols=78 Identities=26% Similarity=0.330 Sum_probs=72.8
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~ 350 (858)
..++|||+|||.++|+++|+++|++||.|++|++ ++.++|||||+|.+.++|++|++.|||..+.|+.|+|++++
T Consensus 8 ~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A~ 87 (93)
T d1x5ua1 8 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKAS 87 (93)
T ss_dssp TTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEETT
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 3568999999999999999999999999999976 46688999999999999999999999999999999999998
Q ss_pred CCc
Q 003009 351 PGG 353 (858)
Q Consensus 351 ~~~ 353 (858)
++.
T Consensus 88 ~~~ 90 (93)
T d1x5ua1 88 AHN 90 (93)
T ss_dssp TTS
T ss_pred CCC
Confidence 865
No 9
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.61 E-value=6.6e-16 Score=135.57 Aligned_cols=79 Identities=20% Similarity=0.429 Sum_probs=72.5
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccc
Q 003009 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 263 (858)
Q Consensus 189 ~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~ 263 (858)
....++|||+|||.++++++|+++|++||+|.+|++ +++++|||||+|.+.++|++|+..|+|..+.|++|+|+|
T Consensus 4 s~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~ 83 (88)
T d1rk8a_ 4 SVEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDW 83 (88)
T ss_dssp CC-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 345689999999999999999999999999999874 467899999999999999999999999999999999999
Q ss_pred cCCC
Q 003009 264 SIPK 267 (858)
Q Consensus 264 a~pk 267 (858)
|.++
T Consensus 84 a~~k 87 (88)
T d1rk8a_ 84 CFVK 87 (88)
T ss_dssp SEEC
T ss_pred ecCC
Confidence 9764
No 10
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.61 E-value=1.2e-15 Score=135.39 Aligned_cols=79 Identities=16% Similarity=0.324 Sum_probs=73.6
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
...++|||+|||.++|+++|+++|++||+|.+|++ +++++|||||+|.+.++|++|++.|+|..|.|++|+|+||
T Consensus 7 ~~~~tlfV~nLp~~~t~~~l~~~F~~~G~v~~v~~~~d~~tg~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~A 86 (93)
T d1x5ua1 7 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPIRVNKA 86 (93)
T ss_dssp CTTTEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBCEEEET
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhCCccccceeecccccccccceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEc
Confidence 44689999999999999999999999999999974 5789999999999999999999999999999999999999
Q ss_pred CCCC
Q 003009 265 IPKD 268 (858)
Q Consensus 265 ~pk~ 268 (858)
.++.
T Consensus 87 ~~~~ 90 (93)
T d1x5ua1 87 SAHN 90 (93)
T ss_dssp TTTS
T ss_pred CCCC
Confidence 8764
No 11
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.61 E-value=7e-16 Score=135.43 Aligned_cols=79 Identities=24% Similarity=0.388 Sum_probs=71.9
Q ss_pred CCccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 003009 275 LNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (858)
Q Consensus 275 ~~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s 349 (858)
....+|||+|||.++|+++|+++|++||.|++|++ ++.++|||||+|.+.++|++|++.|||..+.|++|+|+|+
T Consensus 5 ~~~~~l~V~nL~~~~t~~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~afV~f~~~~~A~~A~~~lng~~l~g~~l~V~~a 84 (88)
T d1rk8a_ 5 VEGWILFVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQTIQVDWC 84 (88)
T ss_dssp C-CEEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTEECEEEES
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCcccccccccccccccccceeEEECCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 34578999999999999999999999999999976 3567899999999999999999999999999999999999
Q ss_pred CCCc
Q 003009 350 RPGG 353 (858)
Q Consensus 350 ~~~~ 353 (858)
.+++
T Consensus 85 ~~kG 88 (88)
T d1rk8a_ 85 FVKG 88 (88)
T ss_dssp EECC
T ss_pred cCCC
Confidence 7653
No 12
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=5.2e-16 Score=136.47 Aligned_cols=78 Identities=27% Similarity=0.452 Sum_probs=72.7
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~ 351 (858)
.++|||+|||.++|+++|+++|++||.|++|++ ++.++|||||+|.+.++|++|++.|||..+.|+.|+|++++|
T Consensus 5 ~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a~p 84 (89)
T d2cqba1 5 KRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKP 84 (89)
T ss_dssp CSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred CcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 468999999999999999999999999999986 467899999999999999999999999999999999999988
Q ss_pred Ccc
Q 003009 352 GGA 354 (858)
Q Consensus 352 ~~~ 354 (858)
+..
T Consensus 85 ~~~ 87 (89)
T d2cqba1 85 MRI 87 (89)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 13
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=8.6e-16 Score=135.33 Aligned_cols=80 Identities=21% Similarity=0.453 Sum_probs=74.1
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccc
Q 003009 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 263 (858)
Q Consensus 189 ~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~ 263 (858)
..+.++|||+|||.++++++|+++|++||+|.+|++ +++++|||||+|.+.++|++|++.|+|..+.|++|.|+|
T Consensus 5 ~~~~~~i~V~nLp~~~t~~~l~~~f~~~G~v~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~v~~ 84 (90)
T d2cq0a1 5 ADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDHLILNVEW 84 (90)
T ss_dssp CSSSEEEEEESCCTTCCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHHTTTCEETTEECEEEE
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHhcccccccccccccccccccceeEEECCHHHHHHHHHHhCCCEECCEEEEEEe
Confidence 345689999999999999999999999999999874 567899999999999999999999999999999999999
Q ss_pred cCCCC
Q 003009 264 SIPKD 268 (858)
Q Consensus 264 a~pk~ 268 (858)
|+|+.
T Consensus 85 akp~~ 89 (90)
T d2cq0a1 85 AKPST 89 (90)
T ss_dssp SSCCC
T ss_pred eeCCC
Confidence 98864
No 14
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.1e-15 Score=137.97 Aligned_cols=80 Identities=25% Similarity=0.432 Sum_probs=73.7
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~ 350 (858)
..++|||+|||+++|+++|+++|+.||.|+++++ ++.++|||||+|.+.++|++||+.|||..|.|++|+|+|++
T Consensus 17 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a~ 96 (102)
T d2cpza1 17 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKR 96 (102)
T ss_dssp TTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEeC
Confidence 4568999999999999999999999999999875 45678999999999999999999999999999999999999
Q ss_pred CCccc
Q 003009 351 PGGAR 355 (858)
Q Consensus 351 ~~~~r 355 (858)
++..+
T Consensus 97 ~k~~~ 101 (102)
T d2cpza1 97 SKNDS 101 (102)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 88754
No 15
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.2e-15 Score=135.39 Aligned_cols=80 Identities=23% Similarity=0.298 Sum_probs=72.8
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~ 350 (858)
..+||||+|||.++|+++|+++|++||.|.+|++ ++.++|||||+|.+.++|++|++.|||..++|+.|+|+|+.
T Consensus 6 ~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a~ 85 (93)
T d1h2vz_ 6 KSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDA 85 (93)
T ss_dssp TCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEES
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcC
Confidence 3569999999999999999999999999999986 45678899999999999999999999999999999999987
Q ss_pred CCccc
Q 003009 351 PGGAR 355 (858)
Q Consensus 351 ~~~~r 355 (858)
.....
T Consensus 86 ~~~~g 90 (93)
T d1h2vz_ 86 GFKEG 90 (93)
T ss_dssp CCCTT
T ss_pred CCCCC
Confidence 65443
No 16
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1.5e-15 Score=133.71 Aligned_cols=81 Identities=30% Similarity=0.383 Sum_probs=73.3
Q ss_pred CCccceeeeCCCCCCchhHHHHhhcccCceEEEEeC---CCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 003009 275 LNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRET---PHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (858)
Q Consensus 275 ~~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit---~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~ 351 (858)
...++|||+|||.++|+++|+++|+.||.|.+|++. ...++||||+|.+.++|.+|++.|||..+.|+.|+|.|+++
T Consensus 6 ~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~~ 85 (90)
T d2cqia1 6 GQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT 85 (90)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECCC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCccceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcCC
Confidence 345699999999999999999999999999999873 33578999999999999999999999999999999999988
Q ss_pred Cccc
Q 003009 352 GGAR 355 (858)
Q Consensus 352 ~~~r 355 (858)
+..+
T Consensus 86 ~~~~ 89 (90)
T d2cqia1 86 PSSQ 89 (90)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 7654
No 17
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.59 E-value=1.7e-15 Score=131.37 Aligned_cols=76 Identities=22% Similarity=0.332 Sum_probs=71.2
Q ss_pred CCccceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccC-CceEEEEecC
Q 003009 275 LNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIA-GKRIKLEPSR 350 (858)
Q Consensus 275 ~~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~-Gr~I~V~~s~ 350 (858)
.+.++|||+|||.++|+++|+++|++||.|++|++...++|||||+|.+.++|.+|++.|+|..+. |++|+|+|++
T Consensus 6 pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~ak 82 (83)
T d2b0ga1 6 PPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFAK 82 (83)
T ss_dssp SCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTTCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEECC
T ss_pred CCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecccceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEec
Confidence 346799999999999999999999999999999998888999999999999999999999999885 6899999986
No 18
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=3.8e-16 Score=137.33 Aligned_cols=78 Identities=22% Similarity=0.371 Sum_probs=71.9
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEEEeC---CCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRET---PHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit---~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~~ 353 (858)
.++|||+|||.++|+++|+++|++||.|.++++. ..++|||||+|.+.++|++|++.|||..+.|++|+|++++++.
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~~ 87 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK 87 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTTBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCTT
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecCCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 4589999999999999999999999999999874 3357999999999999999999999999999999999998875
Q ss_pred c
Q 003009 354 A 354 (858)
Q Consensus 354 ~ 354 (858)
.
T Consensus 88 ~ 88 (89)
T d1cvja2 88 E 88 (89)
T ss_dssp T
T ss_pred C
Confidence 4
No 19
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=6.1e-16 Score=136.03 Aligned_cols=79 Identities=27% Similarity=0.492 Sum_probs=73.6
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
..+++|||+|||+++++++|+++|++||+|.+|++ +++++|||||+|.+.++|++|+..|++..+.|++|.|.||
T Consensus 3 ~~~~tlfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~kg~afV~f~~~~~A~~ai~~l~~~~i~g~~l~v~~a 82 (89)
T d2cqba1 3 TTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82 (89)
T ss_dssp CCCSCEEEESCCSSCCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTEEEEEEEC
T ss_pred CCCcEEEEeCCCCcCCHHHHHHHHhhCCeEEecccccccccccccceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEe
Confidence 35689999999999999999999999999999884 5789999999999999999999999999999999999999
Q ss_pred CCCC
Q 003009 265 IPKD 268 (858)
Q Consensus 265 ~pk~ 268 (858)
.|+.
T Consensus 83 ~p~~ 86 (89)
T d2cqba1 83 KPMR 86 (89)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8764
No 20
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.59 E-value=2.2e-15 Score=133.90 Aligned_cols=78 Identities=24% Similarity=0.477 Sum_probs=71.9
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe------CCCCccEEEEEEcCHHHHHHHHHHh-CCCccCCceEEEEe
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE------TPHKRHHKFIEFYDVRAAEAALKSL-NRSDIAGKRIKLEP 348 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri------t~~srG~aFVeF~d~e~A~kAl~~L-nG~~i~Gr~I~V~~ 348 (858)
...+|||+|||.++++++|+++|++||.|++|++ ++.++|||||+|.+.++|++||+.| ||..+.|++|.|+|
T Consensus 7 ~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V~~ 86 (94)
T d2cpha1 7 TTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEW 86 (94)
T ss_dssp CCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEEEE
Confidence 4568999999999999999999999999999987 3457899999999999999999998 89999999999999
Q ss_pred cCCCc
Q 003009 349 SRPGG 353 (858)
Q Consensus 349 s~~~~ 353 (858)
+++..
T Consensus 87 A~~~~ 91 (94)
T d2cpha1 87 ADSEV 91 (94)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 98764
No 21
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.59 E-value=2.5e-15 Score=133.53 Aligned_cols=80 Identities=26% Similarity=0.518 Sum_probs=73.1
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe------CCCcccEEEEEEcCHHHHHHHHHHh-cCCccccccccc
Q 003009 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT------ACKHRGFVMISYYDIRAARTAMRAL-QNKPLRRRKLDI 261 (858)
Q Consensus 189 ~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~------~~ksrG~aFV~F~d~e~A~~Al~~L-ng~~l~gr~L~V 261 (858)
...+++|||+|||.++++++|+++|++||.|..|++ +++++|||||+|.+.++|++|+..| ++..|.|++|.|
T Consensus 5 ~~~~~~l~V~nLp~~~~e~~l~~~F~~~G~i~~v~i~~~~~~~g~~rg~afV~f~~~~~A~~Ai~~l~~~~~~~Gr~l~V 84 (94)
T d2cpha1 5 KQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVL 84 (94)
T ss_dssp SSCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBCEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHhCCceEEEEEeccccCCCcccEEEEEECCHHHHHHHHHHccCCcEECCEEEEE
Confidence 346788999999999999999999999999999984 4678999999999999999999998 889999999999
Q ss_pred cccCCCC
Q 003009 262 HFSIPKD 268 (858)
Q Consensus 262 ~~a~pk~ 268 (858)
+||.++.
T Consensus 85 ~~A~~~~ 91 (94)
T d2cpha1 85 EWADSEV 91 (94)
T ss_dssp EECCCCC
T ss_pred EEcCCCC
Confidence 9997654
No 22
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=2.2e-15 Score=138.08 Aligned_cols=99 Identities=21% Similarity=0.421 Sum_probs=82.3
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEEEe--CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCcc
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE--TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGA 354 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri--t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~~~ 354 (858)
.++|||+|||.++|+++|+++|++||.|++|++ ++.++|||||+|.+.++|.+|++.|||..|.|+.|.|.++.+...
T Consensus 7 ~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~~~~ 86 (114)
T d2f9da1 7 NRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRA 86 (114)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECSTTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHhhcCCeEeecccccCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCch
Confidence 468999999999999999999999999999987 456789999999999999999999999999999999999875432
Q ss_pred cchhhhccchhhcHHHHHHHHhhcC
Q 003009 355 RRNLMLQLNQELEQDESRILQHQVG 379 (858)
Q Consensus 355 r~~~~~ql~~~~~~~~l~~~f~~~G 379 (858)
. ........++.+.....++|
T Consensus 87 ~----~~~~~~~~~~~~~~~~~~~g 107 (114)
T d2f9da1 87 F----QKMDTKKKEEQLKLLKEKYG 107 (114)
T ss_dssp T----TTSCHHHHHHHHHHHHHHHC
T ss_pred h----hhhHHHHHHHHHHHHHHHhC
Confidence 2 22223334556666667776
No 23
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=1.2e-15 Score=131.44 Aligned_cols=73 Identities=29% Similarity=0.375 Sum_probs=68.7
Q ss_pred ceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 003009 279 TLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (858)
Q Consensus 279 tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~ 351 (858)
+|||+|||+.+|+++|+++|++||.|.+|++ ++.++|||||+|.++++|.+|++.|||..+.|++|+|.|++.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~~ 79 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQR 79 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECCC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeCC
Confidence 6999999999999999999999999999987 356789999999999999999999999999999999999864
No 24
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.58 E-value=1.1e-15 Score=136.33 Aligned_cols=80 Identities=21% Similarity=0.364 Sum_probs=75.9
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCccc
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGAR 355 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~~~r 355 (858)
...+|||+|||.++|+++|+++|++||.|..++.++.+++||||+|.+.++|++|++.|||..+.|+.|+|.|+.++..+
T Consensus 15 ~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~~k~~~ 94 (96)
T d1fjca_ 15 AARTLLAKNLSFNITEDELKEVFEDALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGGT 94 (96)
T ss_dssp GGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECSSSCCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcccceeeeecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeCCCCCC
Confidence 45789999999999999999999999999999999899999999999999999999999999999999999999988654
No 25
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.58 E-value=1.8e-15 Score=129.73 Aligned_cols=73 Identities=25% Similarity=0.395 Sum_probs=68.5
Q ss_pred cceeeeCCCCCCchhHHHHhhcccCceEEEEe----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 003009 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (858)
Q Consensus 278 ~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~ 350 (858)
++|||+|||+++++++|+++|++||.|+++++ +++++|||||+|.+.++|++|++.|||..+.|++|+|+++.
T Consensus 1 grl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 1 GKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp CEEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 46999999999999999999999999999987 45678899999999999999999999999999999999975
No 26
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.58 E-value=9.4e-16 Score=132.19 Aligned_cols=74 Identities=22% Similarity=0.287 Sum_probs=66.8
Q ss_pred cceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 003009 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (858)
Q Consensus 278 ~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~ 351 (858)
+||||+|||.++|+++|+++|++||.|..+.+ .+.++|||||+|.+.++|++|++.|||..+.|++|+|++++|
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 68999999999999999999999999987754 456789999999999999999999999999999999999987
No 27
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=8.6e-16 Score=140.92 Aligned_cols=102 Identities=25% Similarity=0.399 Sum_probs=85.8
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe--CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCCC
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT--ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 267 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~--~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~pk 267 (858)
..+++|||+|||.++++++|+++|++||+|..|++ ++.++|||||+|.+.++|+.|++.|+|..|.|++|.|.|+.+.
T Consensus 5 ~~~r~l~V~nLp~~~te~~l~~~F~~~G~v~~i~~~~~~~~kG~afV~f~~~~~A~~Ai~~l~g~~~~gr~l~V~~a~~~ 84 (114)
T d2f9da1 5 EVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNAN 84 (114)
T ss_dssp TCCSEEEEESCCTTCCHHHHHHHHHTTSCEEEEEEECSTTTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEEECCHH
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcCCeEeecccccCCcCCeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCC
Confidence 35789999999999999999999999999999985 5678999999999999999999999999999999999998643
Q ss_pred CCCCCCCCCccceeeeCCCCCCchhHHHHhhcccCc
Q 003009 268 DNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGE 303 (858)
Q Consensus 268 ~~~~~~~~~~~tLfV~NLp~~vTeedL~~~Fs~fG~ 303 (858)
.... .......+++++.+.++||.
T Consensus 85 ~~~~------------~~~~~~~~~~~~~~~~~~g~ 108 (114)
T d2f9da1 85 RAFQ------------KMDTKKKEEQLKLLKEKYGI 108 (114)
T ss_dssp HHTT------------TSCHHHHHHHHHHHHHHHCC
T ss_pred chhh------------hhHHHHHHHHHHHHHHHhCC
Confidence 2111 12223457788888888874
No 28
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=2.5e-15 Score=133.25 Aligned_cols=78 Identities=26% Similarity=0.431 Sum_probs=72.6
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
..+++|||+|||.++|+++|+++|++||+|.+|.+ +++++|||||+|.+.++|++|++.|+|..+.|++|+|.|+
T Consensus 5 ~~s~tlfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V~~a 84 (93)
T d1h2vz_ 5 KKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWD 84 (93)
T ss_dssp TTCCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEECEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCcceeccccccccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEc
Confidence 45789999999999999999999999999999984 5778999999999999999999999999999999999998
Q ss_pred CCC
Q 003009 265 IPK 267 (858)
Q Consensus 265 ~pk 267 (858)
...
T Consensus 85 ~~~ 87 (93)
T d1h2vz_ 85 AGF 87 (93)
T ss_dssp SCC
T ss_pred CCC
Confidence 654
No 29
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=3.5e-15 Score=132.22 Aligned_cols=79 Identities=22% Similarity=0.390 Sum_probs=72.2
Q ss_pred CCccceeeeCCCCCCchhHHHHhhcccCceEEEEeC---CCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 003009 275 LNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRET---PHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (858)
Q Consensus 275 ~~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit---~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~ 351 (858)
....+|||+|||+++|+++|+++|++||.|++|++. ..++|||||+|.+.++|++|++.|||..+.|++|+|+++++
T Consensus 9 ~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~~ 88 (93)
T d2cq3a1 9 STPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATA 88 (93)
T ss_dssp CCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEECCS
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccccCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecCc
Confidence 345689999999999999999999999999999873 33689999999999999999999999999999999999988
Q ss_pred Cc
Q 003009 352 GG 353 (858)
Q Consensus 352 ~~ 353 (858)
+.
T Consensus 89 r~ 90 (93)
T d2cq3a1 89 RV 90 (93)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 30
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.58 E-value=3.7e-15 Score=133.47 Aligned_cols=81 Identities=26% Similarity=0.399 Sum_probs=74.7
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
..+++|||+|||+++++++|+++|++||+|.+|++ +++++|||||+|.+.++|++|++.|++..|.|++|+|.++
T Consensus 6 ~~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a 85 (99)
T d1whwa_ 6 SGSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPS 85 (99)
T ss_dssp CSCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEEC
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 45688999999999999999999999999999984 5778999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 003009 265 IPKDNP 270 (858)
Q Consensus 265 ~pk~~~ 270 (858)
.++...
T Consensus 86 ~~~~~~ 91 (99)
T d1whwa_ 86 TIKKEA 91 (99)
T ss_dssp CCCSTT
T ss_pred CCCCcc
Confidence 876543
No 31
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=1.5e-15 Score=133.43 Aligned_cols=80 Identities=24% Similarity=0.506 Sum_probs=73.0
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~ 350 (858)
..++|||+|||+++|+++|+++|++||.|..+.+ ++.++|||||+|.++++|++|++.|||..+.|++|+|+++.
T Consensus 4 ~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~ 83 (90)
T d1x5sa1 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAG 83 (90)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEE
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 3467999999999999999999999999999865 45678999999999999999999999999999999999998
Q ss_pred CCccc
Q 003009 351 PGGAR 355 (858)
Q Consensus 351 ~~~~r 355 (858)
++..+
T Consensus 84 ~~~~~ 88 (90)
T d1x5sa1 84 KSSDN 88 (90)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 77654
No 32
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=2.2e-15 Score=131.41 Aligned_cols=75 Identities=17% Similarity=0.402 Sum_probs=70.7
Q ss_pred ceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 003009 279 TLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (858)
Q Consensus 279 tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~~ 353 (858)
+|||+|||..+|+++|+++|++||.|.+|++ ++.++|||||+|.+.++|++|++.|||..+.|++|+|+++.+..
T Consensus 3 rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~~ 82 (85)
T d2u2fa_ 3 KLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGA 82 (85)
T ss_dssp CEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCCC
T ss_pred EEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCC
Confidence 6999999999999999999999999999976 46779999999999999999999999999999999999998764
No 33
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=2.6e-15 Score=135.38 Aligned_cols=79 Identities=16% Similarity=0.387 Sum_probs=73.2
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccC
Q 003009 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (858)
Q Consensus 191 ~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~ 265 (858)
+.++|||+|||+++++++|+++|++||.|.++++ +++++|||||+|.+.++|++|++.|+|..|.|++|+|+|+.
T Consensus 17 ~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~g~~kG~afV~f~~~~~A~~Ai~~lng~~~~g~~i~V~~a~ 96 (102)
T d2cpza1 17 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKR 96 (102)
T ss_dssp TTCCEEEESCCSSCCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEECEEECCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhccccccceeeecccCCCccceEEEeCCHHHHHHHHHHhCCCEECCEEEEEEEeC
Confidence 4678999999999999999999999999988873 56789999999999999999999999999999999999998
Q ss_pred CCCC
Q 003009 266 PKDN 269 (858)
Q Consensus 266 pk~~ 269 (858)
++..
T Consensus 97 ~k~~ 100 (102)
T d2cpza1 97 SKND 100 (102)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 8754
No 34
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.57 E-value=4.5e-15 Score=128.64 Aligned_cols=77 Identities=18% Similarity=0.352 Sum_probs=71.8
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCccc-cccccccccC
Q 003009 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLR-RRKLDIHFSI 265 (858)
Q Consensus 189 ~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~-gr~L~V~~a~ 265 (858)
..|+++|||+|||.++++++|+++|++||+|..|++....+|||||+|.+.++|++|++.|+|..|. +++|+|.||+
T Consensus 5 ~pP~~tl~V~nLp~~~t~~~l~~~f~~~G~i~~v~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~~~~~i~v~~ak 82 (83)
T d2b0ga1 5 QPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFTTELQSNAAKEALQGFKITPTHAMKITFAK 82 (83)
T ss_dssp CSCCSEEEEESCCTTCCHHHHHHHHTTSTTEEEEEECTTTCSCEEEEESSHHHHHHHHHHHTTCBSSTTCBCEEEECC
T ss_pred CCCCCEEEEECCCCCCCHHHHHhhhccCccEEEeeeecccceeEEEecCCHHHHHHHHHHhCCcEeCCCcEEEEEEec
Confidence 4578999999999999999999999999999999987778899999999999999999999999885 6899999985
No 35
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=3e-15 Score=130.46 Aligned_cols=75 Identities=29% Similarity=0.431 Sum_probs=68.2
Q ss_pred CCccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCC--ceEEEE
Q 003009 275 LNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAG--KRIKLE 347 (858)
Q Consensus 275 ~~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~G--r~I~V~ 347 (858)
...++|||+|||.++|+++|+++|++||.|+++++ ++.++|||||+|.+.++|++|++.|||..+.| ++|+|+
T Consensus 4 ~k~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~ 83 (85)
T d1fxla2 4 IRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVK 83 (85)
T ss_dssp GTTCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEE
Confidence 34568999999999999999999999999999986 35678999999999999999999999999998 569998
Q ss_pred ec
Q 003009 348 PS 349 (858)
Q Consensus 348 ~s 349 (858)
||
T Consensus 84 ~A 85 (85)
T d1fxla2 84 FA 85 (85)
T ss_dssp EC
T ss_pred eC
Confidence 86
No 36
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.56 E-value=4.4e-15 Score=132.95 Aligned_cols=78 Identities=28% Similarity=0.420 Sum_probs=72.2
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~ 350 (858)
..++|||+|||+++|+++|+++|++||.|.+|++ ++.++|||||+|.+.++|++||+.|||..+.|+.|+|+++.
T Consensus 7 ~~~~lfV~nL~~~~t~~~l~~~F~~~g~v~~v~i~~d~~tg~~~g~afV~f~~~~~a~~A~~~l~g~~~~gr~i~V~~a~ 86 (99)
T d1whwa_ 7 GSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPST 86 (99)
T ss_dssp SCEEEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCEEEEEECC
T ss_pred CCCEEEEECCCCcCCHHHHHHHHHhcCCceeeeecccccccccCcceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECC
Confidence 3467999999999999999999999999999986 45678999999999999999999999999999999999998
Q ss_pred CCc
Q 003009 351 PGG 353 (858)
Q Consensus 351 ~~~ 353 (858)
++.
T Consensus 87 ~~~ 89 (99)
T d1whwa_ 87 IKK 89 (99)
T ss_dssp CCS
T ss_pred CCC
Confidence 764
No 37
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=6.9e-15 Score=130.30 Aligned_cols=80 Identities=23% Similarity=0.405 Sum_probs=72.9
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe---CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccC
Q 003009 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT---ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (858)
Q Consensus 189 ~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~---~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~ 265 (858)
....++|||+|||+++++++|+++|++||+|..|++ ...++|||||+|.+.++|++|++.|++..|.|++|+|+||.
T Consensus 8 ~~~~~~l~v~nLp~~~t~~~L~~~F~~~G~v~~v~~~~~~~~~kg~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~A~ 87 (93)
T d2cq3a1 8 KSTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNAT 87 (93)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEECC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhhcceeeeccccccccCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEecC
Confidence 345688999999999999999999999999999885 34478999999999999999999999999999999999998
Q ss_pred CCC
Q 003009 266 PKD 268 (858)
Q Consensus 266 pk~ 268 (858)
++.
T Consensus 88 ~r~ 90 (93)
T d2cq3a1 88 ARV 90 (93)
T ss_dssp SSC
T ss_pred cCC
Confidence 764
No 38
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.56 E-value=3.5e-15 Score=129.85 Aligned_cols=75 Identities=24% Similarity=0.434 Sum_probs=68.7
Q ss_pred CCccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCC--ceEEEE
Q 003009 275 LNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAG--KRIKLE 347 (858)
Q Consensus 275 ~~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~G--r~I~V~ 347 (858)
...++|||+|||.++++++|+++|++||.|.++++ +++++|||||+|.+.++|.+|++.|||..+.| ++|+|+
T Consensus 4 ~~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~ 83 (85)
T d1b7fa2 4 IKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVR 83 (85)
T ss_dssp TTTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEE
Confidence 44568999999999999999999999999999976 45678999999999999999999999999987 889999
Q ss_pred ec
Q 003009 348 PS 349 (858)
Q Consensus 348 ~s 349 (858)
||
T Consensus 84 ~A 85 (85)
T d1b7fa2 84 LA 85 (85)
T ss_dssp EC
T ss_pred EC
Confidence 86
No 39
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=8e-16 Score=139.79 Aligned_cols=77 Identities=29% Similarity=0.517 Sum_probs=71.3
Q ss_pred ccceeeeCCCC-CCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 003009 277 QGTLVVFNLDP-SVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (858)
Q Consensus 277 ~~tLfV~NLp~-~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~~ 353 (858)
..+|||+||++ .+|+++|+++|++||.|++|++...++|||||+|+++++|++|++.|||..+.|++|+|+|++...
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~~~ 79 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQN 79 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSCCC
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCC
Confidence 35899999965 599999999999999999999988889999999999999999999999999999999999987543
No 40
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=4.5e-15 Score=130.61 Aligned_cols=80 Identities=19% Similarity=0.442 Sum_probs=72.5
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe---CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccC
Q 003009 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT---ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (858)
Q Consensus 189 ~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~---~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~ 265 (858)
+.+.++|||+|||.++++++|+++|++||+|.+|++ ....+|||||+|.+.++|++|+..|+|..|.|++|+|.||.
T Consensus 5 ~~~~~tl~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~g~~i~v~~a~ 84 (90)
T d2cqia1 5 DGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT 84 (90)
T ss_dssp SCCCCEEEEESCCTTCCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHhcCCceeeeeecccCccceeeEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 345689999999999999999999999999999985 23468999999999999999999999999999999999997
Q ss_pred CCC
Q 003009 266 PKD 268 (858)
Q Consensus 266 pk~ 268 (858)
++.
T Consensus 85 ~~~ 87 (90)
T d2cqia1 85 TPS 87 (90)
T ss_dssp CTT
T ss_pred CCC
Confidence 654
No 41
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.56 E-value=3.4e-15 Score=129.83 Aligned_cols=75 Identities=24% Similarity=0.463 Sum_probs=68.3
Q ss_pred EEEeCCCCCCCHHHHHHHhhcCCCEEEEEeC--------CCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCC
Q 003009 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTA--------CKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 266 (858)
Q Consensus 195 LfV~NLP~~vteeeLr~lFs~fG~I~sv~~~--------~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~p 266 (858)
|||+|||.++|+++|+++|++||+|.++++. .+++|||||+|.+.++|++|++.|+|..+.|++|.|+|+.+
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 8999999999999999999999999998741 24689999999999999999999999999999999999976
Q ss_pred CCC
Q 003009 267 KDN 269 (858)
Q Consensus 267 k~~ 269 (858)
+..
T Consensus 81 ~~k 83 (85)
T d2cpfa1 81 ATK 83 (85)
T ss_dssp SSC
T ss_pred CCC
Confidence 543
No 42
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.56 E-value=4.6e-15 Score=140.77 Aligned_cols=81 Identities=23% Similarity=0.455 Sum_probs=74.1
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccc
Q 003009 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 263 (858)
Q Consensus 189 ~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~ 263 (858)
....++|||+|||.++++++|+++|++||+|.+|++ +++++|||||+|.+.++|++|++.|+|..|.|++|+|+|
T Consensus 39 ~~~~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~ 118 (139)
T d1u6fa1 39 PDVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVAL 118 (139)
T ss_dssp TTTTSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEE
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 345689999999999999999999999999999874 567899999999999999999999999999999999999
Q ss_pred cCCCCC
Q 003009 264 SIPKDN 269 (858)
Q Consensus 264 a~pk~~ 269 (858)
+.++..
T Consensus 119 a~~~~~ 124 (139)
T d1u6fa1 119 AASGHQ 124 (139)
T ss_dssp SSCCCC
T ss_pred cCCCCC
Confidence 977654
No 43
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=99.56 E-value=3.6e-15 Score=141.50 Aligned_cols=79 Identities=29% Similarity=0.471 Sum_probs=72.5
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~ 351 (858)
.++|||+|||.++|+++|+++|++||.|++|++ ++.++|||||+|.+.++|++||+.|||..|.|++|+|+++++
T Consensus 42 ~~~l~V~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~t~~~rg~afV~f~~~~~A~~Ai~~lng~~~~gr~l~V~~a~~ 121 (139)
T d1u6fa1 42 LRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKRLKVALAAS 121 (139)
T ss_dssp TSEEEEESCSTTCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCEEEEEESSC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhccccccccccccccccccceeeEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCC
Confidence 357999999999999999999999999999986 456789999999999999999999999999999999999987
Q ss_pred Cccc
Q 003009 352 GGAR 355 (858)
Q Consensus 352 ~~~r 355 (858)
+..+
T Consensus 122 ~~~~ 125 (139)
T d1u6fa1 122 GHQR 125 (139)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6543
No 44
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.56 E-value=2.3e-15 Score=137.00 Aligned_cols=78 Identities=13% Similarity=0.261 Sum_probs=72.2
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCCC
Q 003009 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 267 (858)
Q Consensus 189 ~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~pk 267 (858)
.+.+++|||+|||+++++++|+++|++||+|..|.+ .+.+|||||+|.+.++|++|++.|+|..|.|++|+|+|+...
T Consensus 7 ~r~~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l-~~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~~ 84 (111)
T d1whxa_ 7 GRSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLL-PEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIG 84 (111)
T ss_dssp SEEEEEEEEESCCTTCCHHHHHHHHHTTSCEEEEEC-CSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEETT
T ss_pred CCCCCEEEEECCCCCCCHHHHHhhhhccCCccEEEe-eccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCCC
Confidence 356689999999999999999999999999999976 568999999999999999999999999999999999998543
No 45
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.56 E-value=2e-15 Score=130.06 Aligned_cols=74 Identities=19% Similarity=0.229 Sum_probs=66.5
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCC
Q 003009 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 266 (858)
Q Consensus 193 ~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~p 266 (858)
++|||+|||+++|+++|+++|++||.|..+++ .++++|||||+|.+.++|++|++.|+|..+.|++|.|+++.|
T Consensus 2 ~tl~v~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~e~A~~Ai~~l~g~~~~g~~i~V~~a~P 80 (81)
T d2ghpa1 2 CTLWMTNFPPSYTQRNIRDLLQDINVVALSIRLPSLRFNTSRRFAYIDVTSKEDARYCVEKLNGLKIEGYTLVTKVSNP 80 (81)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHTTCCCCEEECC-------CCEEEEECSSHHHHHHHHHHHTTCEETTEECEEEECCC
T ss_pred cEEEEECCCCcCCHHHHHHHHHHhCcEEeeeeecccccccccceeEEEECCHHHHHHHHHHhCCCEECCEEEEEEEccC
Confidence 79999999999999999999999999977653 578899999999999999999999999999999999999976
No 46
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=4e-15 Score=132.75 Aligned_cols=77 Identities=23% Similarity=0.387 Sum_probs=71.5
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~~ 353 (858)
...+|||+|||..+++++|+++|++||.|++|++.. .+|||||+|++.++|++|+..|||..|.|+.|+|.|+++..
T Consensus 17 ~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~~-~kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~~p 93 (96)
T d1x4ga1 17 KNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFP-EKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESP 93 (96)
T ss_dssp SCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEET-TTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCCCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEEe-cceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 346899999999999999999999999999999975 48999999999999999999999999999999999998753
No 47
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.55 E-value=3e-15 Score=130.14 Aligned_cols=74 Identities=24% Similarity=0.397 Sum_probs=67.7
Q ss_pred eeeeCCCCCCchhHHHHhhcccCceEEEEeC-----C---CCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 003009 280 LVVFNLDPSVSNEDLRQIFGAYGEVKEIRET-----P---HKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (858)
Q Consensus 280 LfV~NLp~~vTeedL~~~Fs~fG~I~~irit-----~---~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~ 351 (858)
|||+|||.++|+++|+++|++||.|++|++. + .++|||||+|.+.++|++|++.|||..++|+.|+|+++++
T Consensus 1 LfV~nLp~~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~~~kG~afV~f~~~~~A~~A~~~~~~~~~~g~~i~V~~a~~ 80 (85)
T d2cpfa1 1 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHKLEVRISER 80 (85)
T ss_dssp EEEESCCTTCCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEECEEECSSC
T ss_pred CEEcCCCCCCCHHHHHHHHHHhCCccccceecccccccccccceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCC
Confidence 7999999999999999999999999999762 1 2578999999999999999999999999999999999876
Q ss_pred Cc
Q 003009 352 GG 353 (858)
Q Consensus 352 ~~ 353 (858)
..
T Consensus 81 ~~ 82 (85)
T d2cpfa1 81 AT 82 (85)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 48
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=3.9e-15 Score=129.82 Aligned_cols=76 Identities=18% Similarity=0.413 Sum_probs=71.1
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCCC
Q 003009 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 267 (858)
Q Consensus 193 ~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~pk 267 (858)
.+|||+|||.++|+++|+++|++||+|.+|++ +++++|||||+|.++++|++|++.|++..|.|++|.|+||.+.
T Consensus 2 ~rlfV~nlp~~~te~~l~~~F~~~G~v~~v~i~~d~~tg~~rg~aFV~f~~~~~A~~a~~~l~~~~l~g~~l~V~~A~~~ 81 (85)
T d2u2fa_ 2 HKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVG 81 (85)
T ss_dssp CCEEEETCCSSCCSHHHHHHHTSSSCEEEEEEECCCSSSCCCCEEEEEESSSHHHHHHHHTSSSCCCSSSCCEEEECCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHhcCccceEEeeccccccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCC
Confidence 47999999999999999999999999999874 5788999999999999999999999999999999999999764
Q ss_pred C
Q 003009 268 D 268 (858)
Q Consensus 268 ~ 268 (858)
.
T Consensus 82 ~ 82 (85)
T d2u2fa_ 82 A 82 (85)
T ss_dssp C
T ss_pred C
Confidence 3
No 49
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=3.9e-15 Score=130.82 Aligned_cols=78 Identities=23% Similarity=0.473 Sum_probs=72.3
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccC
Q 003009 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (858)
Q Consensus 191 ~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~ 265 (858)
..++|||+|||+++++++|+++|++||.|..+.+ ++.++|||||+|.+.++|++|++.|+|..|.|++|.|+|+.
T Consensus 4 ~~~kifV~nLp~~~t~~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~~~a~~Ai~~l~~~~~~g~~l~V~~a~ 83 (90)
T d1x5sa1 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAG 83 (90)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCCEEEEEE
T ss_pred CCCEEEEECCCCcCCHHHHHHhhhccccccceeeccccccccccceEEEEECCHHHHHHHHHHcCCCEECCEEEEEEEcC
Confidence 4578999999999999999999999999998863 57789999999999999999999999999999999999997
Q ss_pred CCC
Q 003009 266 PKD 268 (858)
Q Consensus 266 pk~ 268 (858)
++.
T Consensus 84 ~~~ 86 (90)
T d1x5sa1 84 KSS 86 (90)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 50
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=7.3e-15 Score=130.57 Aligned_cols=77 Identities=31% Similarity=0.509 Sum_probs=71.2
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEeC--CCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRET--PHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPG 352 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit--~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~ 352 (858)
+.++|||+|||+++|+++|+++|+.||.|+.+++. ...++||||+|.+.++|++||+.|||..+.|++|+|+|+++.
T Consensus 13 ~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~~~ 91 (95)
T d1x4aa1 13 NDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSG 91 (95)
T ss_dssp CSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCCCC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEecccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEeccCC
Confidence 45689999999999999999999999999999873 456899999999999999999999999999999999999865
No 51
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=99.55 E-value=6.7e-15 Score=128.08 Aligned_cols=75 Identities=24% Similarity=0.442 Sum_probs=69.0
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCcccc--cccccc
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRR--RKLDIH 262 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~g--r~L~V~ 262 (858)
...++|||+|||.++++++|+++|++||+|..+++ +++++|||||+|.+.++|++|++.|++..+.| ++|+|+
T Consensus 4 ~~~t~lfV~nlp~~~te~~l~~~F~~~G~i~~~~~~~d~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~~~l~V~ 83 (85)
T d1b7fa2 4 IKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVR 83 (85)
T ss_dssp TTTCEEEEESCCTTCCHHHHHHHHTSSSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCEeeeeeecccccccCceeEEEEECCHHHHHHHHHHHCCCEeCCCCeEEEEE
Confidence 35678999999999999999999999999999874 57789999999999999999999999999976 889999
Q ss_pred cc
Q 003009 263 FS 264 (858)
Q Consensus 263 ~a 264 (858)
||
T Consensus 84 ~A 85 (85)
T d1b7fa2 84 LA 85 (85)
T ss_dssp EC
T ss_pred EC
Confidence 86
No 52
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=5.8e-15 Score=132.27 Aligned_cols=75 Identities=21% Similarity=0.363 Sum_probs=68.7
Q ss_pred CccceeeeCCC-CCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 003009 276 NQGTLVVFNLD-PSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (858)
Q Consensus 276 ~~~tLfV~NLp-~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~~ 353 (858)
...+|||+||+ ..+++++|+++|++||.|++|++ ++|||||+|++.++|++||+.|||+.+.|++|+|++++++.
T Consensus 14 ~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i---~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~~ 89 (98)
T d1wf2a_ 14 MNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV---HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPK 89 (98)
T ss_dssp CCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE---ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETTSCC
T ss_pred CCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE---eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 34679999997 56788899999999999999999 58999999999999999999999999999999999997654
No 53
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=4.1e-15 Score=128.06 Aligned_cols=72 Identities=17% Similarity=0.367 Sum_probs=68.4
Q ss_pred EEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccC
Q 003009 194 TLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (858)
Q Consensus 194 tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~ 265 (858)
.|||+|||.++|+++|+++|++||+|.+|++ +++++|||||+|.+.++|++|++.|+|..+.|++|+|.|+.
T Consensus 2 slfV~nL~~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~~g~aFV~f~~~~~a~~ai~~l~g~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 2 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ 78 (80)
T ss_dssp EEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHTTSTTCEETTEECEEEECC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHhCCEeEEEEEecccccCCCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEEeC
Confidence 6999999999999999999999999999984 47789999999999999999999999999999999999984
No 54
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.55 E-value=2.3e-15 Score=134.14 Aligned_cols=81 Identities=22% Similarity=0.385 Sum_probs=76.0
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCCCC
Q 003009 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (858)
Q Consensus 189 ~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~pk~ 268 (858)
..+.++|||+|||.++++++|+++|++||.|..++.+++++|||||+|.+.++|++|+..|++..|.|++|+|.|+.++.
T Consensus 13 ~~~~~~l~V~nL~~~~te~~l~~~F~~~g~v~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~~~gr~i~V~~a~~k~ 92 (96)
T d1fjca_ 13 VRAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKG 92 (96)
T ss_dssp TTGGGEEEEESCCSSCCHHHHHHHHCSEEEECCEEETTEEEEEEEEEESSHHHHHHHHHHTTEEEETTEEEEEEECSSSC
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHhcccceeeeecCccccEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEEeCCCC
Confidence 34578999999999999999999999999999888889999999999999999999999999999999999999998865
Q ss_pred C
Q 003009 269 N 269 (858)
Q Consensus 269 ~ 269 (858)
.
T Consensus 93 ~ 93 (96)
T d1fjca_ 93 G 93 (96)
T ss_dssp C
T ss_pred C
Confidence 4
No 55
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=4.7e-15 Score=129.28 Aligned_cols=77 Identities=21% Similarity=0.330 Sum_probs=71.4
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCCCCC
Q 003009 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDN 269 (858)
Q Consensus 192 s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~pk~~ 269 (858)
.++|||+|||+++++++|+++|++||.|..+.+ .+++|||||+|.+.++|++|+..|+|..|.|++|.|+|++|+..
T Consensus 8 ~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~-~~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP~~~ 84 (86)
T d2cpda1 8 VKILYVRNLMLSTSEEMIEKEFNNIKPGAVERV-KKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVDK 84 (86)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEE-EECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCCCCC
T ss_pred CCEEEEcCCCCCCCHHHHHHhhcccceeeeEEE-ccccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccCCCC
Confidence 479999999999999999999999999877764 56899999999999999999999999999999999999988654
No 56
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=7.1e-15 Score=132.70 Aligned_cols=80 Identities=26% Similarity=0.343 Sum_probs=71.3
Q ss_pred CCCccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEe
Q 003009 274 DLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEP 348 (858)
Q Consensus 274 ~~~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~ 348 (858)
+...++|||+|||.++|+++|+++|++||.|.+|++ ++.++|||||+|.+.++|++||+.+|+ .+.|++|+|++
T Consensus 7 d~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~ 85 (103)
T d2cqda1 7 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNL 85 (103)
T ss_dssp SCSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEE
T ss_pred CCCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEE
Confidence 334567999999999999999999999999999987 356899999999999999999999876 79999999999
Q ss_pred cCCCcc
Q 003009 349 SRPGGA 354 (858)
Q Consensus 349 s~~~~~ 354 (858)
+..+..
T Consensus 86 a~~~~~ 91 (103)
T d2cqda1 86 AYLGAK 91 (103)
T ss_dssp STTTCC
T ss_pred cCCCCC
Confidence 876543
No 57
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=1.7e-15 Score=136.76 Aligned_cols=79 Identities=24% Similarity=0.455 Sum_probs=72.6
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccc
Q 003009 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 263 (858)
Q Consensus 189 ~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~ 263 (858)
+++.++|||+|||.++++++|+++|++||+|.+|++ +++++|||||+|.+.++|++|++.|++..|.|++|+|+|
T Consensus 5 ~~~~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~ 84 (104)
T d1p1ta_ 5 DRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDN 84 (104)
T ss_dssp HHHHSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEE
T ss_pred CCCCCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEE
Confidence 345589999999999999999999999999999874 567899999999999999999999999999999999999
Q ss_pred cCCC
Q 003009 264 SIPK 267 (858)
Q Consensus 264 a~pk 267 (858)
+.++
T Consensus 85 a~~~ 88 (104)
T d1p1ta_ 85 AASE 88 (104)
T ss_dssp TTCT
T ss_pred CCCC
Confidence 8764
No 58
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=7.2e-15 Score=127.22 Aligned_cols=71 Identities=28% Similarity=0.518 Sum_probs=66.1
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEE
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL 346 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V 346 (858)
+.++|||+|||.++|+++|+++|++||.|++|++ ++.++|||||+|.+.++|++|++.|||..++|++|+|
T Consensus 8 ~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 8 PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp GGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 4578999999999999999999999999999976 3567899999999999999999999999999999987
No 59
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=3.3e-15 Score=129.26 Aligned_cols=75 Identities=23% Similarity=0.401 Sum_probs=68.3
Q ss_pred eeeeCCCCCCchhHHHHhhcccCceEEE-Ee-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 003009 280 LVVFNLDPSVSNEDLRQIFGAYGEVKEI-RE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (858)
Q Consensus 280 LfV~NLp~~vTeedL~~~Fs~fG~I~~i-ri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~~ 353 (858)
|||+|||+++|+++|+++|++||.|.++ ++ +++++|||||+|.+.++|++|++.|+|..+.|++|+|+++.++.
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 7999999999999999999999998664 43 45678999999999999999999999999999999999998765
Q ss_pred c
Q 003009 354 A 354 (858)
Q Consensus 354 ~ 354 (858)
.
T Consensus 81 ~ 81 (83)
T d1x5ta1 81 S 81 (83)
T ss_dssp C
T ss_pred c
Confidence 4
No 60
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=3.7e-15 Score=130.92 Aligned_cols=77 Identities=17% Similarity=0.361 Sum_probs=71.1
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe---CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCCCC
Q 003009 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYT---ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (858)
Q Consensus 192 s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~---~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~pk~ 268 (858)
..+|||+|||+++++++|+++|++||.|..+++ ...++|||||+|.+.++|++|++.|+|..|.|++|.|.++.++.
T Consensus 8 ~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~i~V~~a~~~~ 87 (89)
T d1cvja2 8 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRK 87 (89)
T ss_dssp TTEEEEESCCSSCCHHHHHHHHHTTSCEEEEEECCBTTBCCSCEEEEESCHHHHHHHTTSSSEEEETTEEEEEEECCCTT
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEeecCCCcceeEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 468999999999999999999999999999885 34478999999999999999999999999999999999998764
No 61
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=7.7e-15 Score=127.80 Aligned_cols=73 Identities=25% Similarity=0.409 Sum_probs=67.2
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCcccc--cccccccc
Q 003009 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRR--RKLDIHFS 264 (858)
Q Consensus 192 s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~g--r~L~V~~a 264 (858)
.++|||+|||.++|+++|+++|++||+|.++++ +++++|||||+|.+.++|++|++.|+|..+.| ++|.|.||
T Consensus 6 ~~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~i~~d~~~g~~kg~afV~f~~~~~a~~Ai~~lng~~~~G~~~~i~V~~A 85 (85)
T d1fxla2 6 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA 85 (85)
T ss_dssp TCEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCCCTTCSSCCEEEEC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHhCCccccccccccccccCCCeeEEEEcCHHHHHHHHHHhCCCEeCCCCEEEEEEeC
Confidence 478999999999999999999999999999884 46799999999999999999999999999987 56888886
No 62
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=1.2e-14 Score=129.06 Aligned_cols=79 Identities=18% Similarity=0.341 Sum_probs=72.6
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe--CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCC
Q 003009 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT--ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 266 (858)
Q Consensus 189 ~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~--~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~p 266 (858)
..++++|||+|||.++++++|+++|++||.|..+.+ ....+|||||+|.+.++|++|++.|++..|.|++|+|+|+++
T Consensus 11 ~~~~~~l~V~nLp~~~t~~~l~~~F~~~G~v~~~~~~~~~~~~g~afV~f~~~e~a~~Ai~~l~g~~~~g~~l~V~~a~~ 90 (95)
T d1x4aa1 11 GNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRS 90 (95)
T ss_dssp CCCSSEEEEESCCTTCCHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTEECEEECCCC
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHhcCCceEEEEecccccccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEeccC
Confidence 355689999999999999999999999999999875 456889999999999999999999999999999999999875
Q ss_pred C
Q 003009 267 K 267 (858)
Q Consensus 267 k 267 (858)
.
T Consensus 91 ~ 91 (95)
T d1x4aa1 91 G 91 (95)
T ss_dssp C
T ss_pred C
Confidence 3
No 63
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=1.1e-14 Score=132.24 Aligned_cols=77 Identities=25% Similarity=0.380 Sum_probs=71.3
Q ss_pred CcEEEEeCCCC-CCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCCCC
Q 003009 192 SRTLFVRNINS-NVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (858)
Q Consensus 192 s~tLfV~NLP~-~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~pk~ 268 (858)
+++|||+|||+ .+|+++|+++|++||+|.+|++....+|||||+|.+.++|++|++.|+|..|.|++|+|+|+....
T Consensus 2 ~~~l~V~nL~p~~~te~~L~~~F~~fG~I~~v~i~~~~kg~afV~f~~~~~A~~ai~~lng~~l~g~~l~v~~s~~~~ 79 (109)
T d2adca1 2 NSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQN 79 (109)
T ss_dssp CSEEEEESCCTTTCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSSSBCEEECCSCCC
T ss_pred CCEEEEeCCCcccCCHHHHHHHHhhccccceEEEEecccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCCC
Confidence 58999999965 599999999999999999999877789999999999999999999999999999999999986543
No 64
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=8.8e-15 Score=128.06 Aligned_cols=77 Identities=29% Similarity=0.432 Sum_probs=70.5
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-eCCCcccEEEEEEcCHHHHHHHHHHhcCCcc-ccccccccccCC
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-TACKHRGFVMISYYDIRAARTAMRALQNKPL-RRRKLDIHFSIP 266 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~-~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l-~gr~L~V~~a~p 266 (858)
.|+++|||+|||.++++++|+++|++||.|..+. ...+.+|||||+|.+.++|.+|+..|+|..+ .|++|+|.|+++
T Consensus 8 pPs~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~sk~ 86 (88)
T d2adca2 8 PPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKS 86 (88)
T ss_dssp CSCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECSSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEECSS
T ss_pred CCCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeeecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeCCC
Confidence 4678999999999999999999999999997765 4677899999999999999999999999988 589999999864
No 65
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=6.6e-15 Score=126.19 Aligned_cols=72 Identities=22% Similarity=0.443 Sum_probs=68.3
Q ss_pred EEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccC
Q 003009 194 TLFVRNINSNVEDSELRALFEQYGDIRTLYT----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (858)
Q Consensus 194 tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~ 265 (858)
+|||+|||+++++++|+++|++||.|.++++ +++++|||||+|.+.++|++|++.|+|..+.|++|+|+++.
T Consensus 2 rl~V~nLp~~~~~~~l~~~F~~~G~v~~~~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~l~g~~l~V~~a~ 77 (78)
T d1no8a_ 2 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVT 77 (78)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHSCEEEEEESCSSCCCSCCEEEEEESCHHHHHHHHHHHTTCEETTEECEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCCCeEEEEEEeeccccceeEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEee
Confidence 6999999999999999999999999999985 66789999999999999999999999999999999999874
No 66
>d2cpda1 d.58.7.1 (A:223-308) APOBEC1 stimulating protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=7.1e-15 Score=128.10 Aligned_cols=77 Identities=26% Similarity=0.264 Sum_probs=71.0
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCcc
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGA 354 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~~~ 354 (858)
.++|||+|||.++|+++|+++|++||.|..+++ ..++|||||+|.++++|.+|+..|||..|.|+.|+|+|++|+..
T Consensus 8 ~k~l~V~nLp~~~te~~l~~~F~~~g~i~~~~~-~~~rg~afV~f~~~~~A~~Ai~~l~~~~i~g~~i~V~~akP~~~ 84 (86)
T d2cpda1 8 VKILYVRNLMLSTSEEMIEKEFNNIKPGAVERV-KKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLAKPVDK 84 (86)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHTTSTTCEEEE-EECSSEEEEEESSHHHHHHHHHHHSSEEETTEEEEEECCCCCCC
T ss_pred CCEEEEcCCCCCCCHHHHHHhhcccceeeeEEE-ccccEEEEEEeCCHHHHHHHHHHcCCCEECCEEEEEEeccCCCC
Confidence 468999999999999999999999999887776 45789999999999999999999999999999999999998753
No 67
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=1.5e-14 Score=129.96 Aligned_cols=78 Identities=13% Similarity=0.254 Sum_probs=71.4
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe----CCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 189 ~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
+...++|||+|||.++++++|+++|++||+|..+.+ .++++|||||+|.+.++|++|++.|||..|.|+++.|.++
T Consensus 15 ~~~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~ 94 (101)
T d1x5oa1 15 EQDPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPT 94 (101)
T ss_dssp CCCTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCS
T ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCC
Confidence 345689999999999999999999999999988763 5678999999999999999999999999999999999987
Q ss_pred CC
Q 003009 265 IP 266 (858)
Q Consensus 265 ~p 266 (858)
.|
T Consensus 95 ~P 96 (101)
T d1x5oa1 95 EP 96 (101)
T ss_dssp SC
T ss_pred CC
Confidence 65
No 68
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=6.6e-15 Score=128.65 Aligned_cols=76 Identities=25% Similarity=0.420 Sum_probs=71.1
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~~ 353 (858)
..+|||+|||.++++++|+++|++||.|.+|++.. .++||||+|++.++|++|++.|||..+.|++|+|+|+.++.
T Consensus 8 ~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~~-~k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~~~ 83 (86)
T d2cpja1 8 RSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHK-DKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSA 83 (86)
T ss_dssp TTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEET-TTTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSCCS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHhCCceEeeeec-ccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCcC
Confidence 45799999999999999999999999999999864 47999999999999999999999999999999999998764
No 69
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.53 E-value=5.9e-15 Score=128.84 Aligned_cols=76 Identities=22% Similarity=0.390 Sum_probs=67.2
Q ss_pred CccceeeeCCCCCCch-hHHHHhhcccCceEEEEe------CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEe
Q 003009 276 NQGTLVVFNLDPSVSN-EDLRQIFGAYGEVKEIRE------TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEP 348 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTe-edL~~~Fs~fG~I~~iri------t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~ 348 (858)
...+|||+|||.++|+ ++|+++|++||.|.+|++ ++.++|||||+|.+.++|++|++ |||..+.|+.|+|++
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEE
Confidence 3568999999999875 559999999999999986 34578999999999999999995 999999999999999
Q ss_pred cCCC
Q 003009 349 SRPG 352 (858)
Q Consensus 349 s~~~ 352 (858)
++++
T Consensus 82 a~~k 85 (86)
T d2ghpa3 82 ADKK 85 (86)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9875
No 70
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=1.4e-14 Score=128.90 Aligned_cols=80 Identities=21% Similarity=0.471 Sum_probs=71.6
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhc------CCccccc
Q 003009 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQ------NKPLRRR 257 (858)
Q Consensus 189 ~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Ln------g~~l~gr 257 (858)
....++|||+|||+++|+++|+++|++||+|.++.+ .++++|||||+|.+.++|++|++.|+ |..+.|+
T Consensus 5 ~~~~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr 84 (98)
T d1x4ha1 5 VTEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGR 84 (98)
T ss_dssp CCCCCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSC
T ss_pred CCCCCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCE
Confidence 345689999999999999999999999999998874 45689999999999999999999887 5668899
Q ss_pred cccccccCCCC
Q 003009 258 KLDIHFSIPKD 268 (858)
Q Consensus 258 ~L~V~~a~pk~ 268 (858)
+|+|+|+.++.
T Consensus 85 ~l~v~~a~~k~ 95 (98)
T d1x4ha1 85 QLKVDLAVTRD 95 (98)
T ss_dssp EEEEECCCCCC
T ss_pred EEEEEECCCCC
Confidence 99999998765
No 71
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=1e-14 Score=127.62 Aligned_cols=77 Identities=29% Similarity=0.371 Sum_probs=69.7
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEE-eCCCCccEEEEEEcCHHHHHHHHHHhCCCcc-CCceEEEEecCCC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIR-ETPHKRHHKFIEFYDVRAAEAALKSLNRSDI-AGKRIKLEPSRPG 352 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~ir-it~~srG~aFVeF~d~e~A~kAl~~LnG~~i-~Gr~I~V~~s~~~ 352 (858)
+..+|||+|||.++|+++|+++|++||.|.+++ ..++.++||||+|.+.++|.+|+..|||..+ +|+.|+|+|+++.
T Consensus 9 Ps~tL~V~NLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~afV~f~~~~~A~~A~~~l~~~~i~~g~~l~v~~sk~~ 87 (88)
T d2adca2 9 PSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKST 87 (88)
T ss_dssp SCSEEEEECCCTTCCHHHHHHHHHTTSCCEEEEEECSSSTTCEEEEESSHHHHHHHHHHHTTCBSSSSCBCEEEECSSC
T ss_pred CCCEEEEECCCCCCCHHHHHHHhhccCCEEEEEEeeecccceeEEEECCHHHHHHHHHhccCCEecCCCEEEEEeCCCC
Confidence 356899999999999999999999999998775 4667789999999999999999999999988 5899999999763
No 72
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=4.3e-15 Score=134.12 Aligned_cols=78 Identities=23% Similarity=0.391 Sum_probs=71.9
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~ 351 (858)
.++|||+|||.++|+++|+++|++||.|.+|++ ++.++|||||+|.+.++|++|++.|||..+.|+.|+|+++.+
T Consensus 8 ~rtl~V~nLp~~~te~~l~~~f~~~G~i~~v~i~~~~~tg~~~g~afV~f~~~~~a~~ai~~l~~~~~~g~~i~V~~a~~ 87 (104)
T d1p1ta_ 8 LRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAAS 87 (104)
T ss_dssp HSCEEEESCCTTSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSSCBEEEETTC
T ss_pred CCEEEEECCCCcCCHHHHHHhhhccccccccccccccceeccCCceEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCC
Confidence 468999999999999999999999999999976 456789999999999999999999999999999999999987
Q ss_pred Ccc
Q 003009 352 GGA 354 (858)
Q Consensus 352 ~~~ 354 (858)
...
T Consensus 88 ~~~ 90 (104)
T d1p1ta_ 88 EKN 90 (104)
T ss_dssp TTH
T ss_pred CCC
Confidence 643
No 73
>d1whxa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.53 E-value=6.9e-15 Score=133.81 Aligned_cols=75 Identities=17% Similarity=0.267 Sum_probs=70.3
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCC
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPG 352 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~ 352 (858)
.++|||+|||+++++++|+++|++||.|..|.+. ..++||||+|.+.++|++|++.|||..|.|++|.|+|+...
T Consensus 10 ~~~l~V~nLp~~~t~~~L~~~F~~fG~I~~v~l~-~~kg~afV~f~~~~~A~~A~~~lng~~~~gr~l~v~~a~~~ 84 (111)
T d1whxa_ 10 KTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLP-EGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIG 84 (111)
T ss_dssp EEEEEEESCCTTCCHHHHHHHHHTTSCEEEEECC-SSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCEEEEEETT
T ss_pred CCEEEEECCCCCCCHHHHHhhhhccCCccEEEee-ccCceEEEEEcCHHHHHHHHHHHcCCccCCCeEEEEECCCC
Confidence 4689999999999999999999999999999984 56899999999999999999999999999999999998654
No 74
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=2.7e-15 Score=135.23 Aligned_cols=76 Identities=21% Similarity=0.450 Sum_probs=69.7
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~ 350 (858)
..++|||+|||+++|+++|+++|+.||.|.+|++ ++.++|||||+|.+.++|++|++ |||..+.|+.|+|+++.
T Consensus 17 ~~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~ 95 (101)
T d2cq4a1 17 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQ 95 (101)
T ss_dssp HHTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECC
Confidence 3468999999999999999999999999999987 46689999999999999999995 99999999999999986
Q ss_pred CC
Q 003009 351 PG 352 (858)
Q Consensus 351 ~~ 352 (858)
+.
T Consensus 96 ~~ 97 (101)
T d2cq4a1 96 AE 97 (101)
T ss_dssp HH
T ss_pred CC
Confidence 54
No 75
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=8.1e-15 Score=126.86 Aligned_cols=72 Identities=22% Similarity=0.444 Sum_probs=67.3
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccc
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDI 261 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V 261 (858)
.++++|||+|||.++|+++|+++|++||.|.+|++ +++++|||||+|.+.++|++|++.|++..|.|++|+|
T Consensus 7 ~~~~~l~V~nL~~~~te~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~gr~i~V 83 (83)
T d2cqca1 7 DPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 83 (83)
T ss_dssp CGGGCEEEESCCSSCCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEETTEEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHhCCCccccccccccccccccceEEEECCHHHHHHHHHHcCCCEECCEEeEC
Confidence 46789999999999999999999999999999874 4778999999999999999999999999999999876
No 76
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=1.2e-14 Score=129.73 Aligned_cols=76 Identities=14% Similarity=0.326 Sum_probs=70.9
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCCC
Q 003009 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 267 (858)
Q Consensus 191 ~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~pk 267 (858)
..++|||+|||.++++++|+++|++||+|.+|++. +.+|||||+|.+.++|++|+..|+|..|.|++|+|.|++++
T Consensus 17 ~~~~l~v~nL~~~~te~~L~~~F~~fG~i~~v~i~-~~kg~afV~f~~~~~A~~Ai~~l~~~~i~g~~l~v~~ak~~ 92 (96)
T d1x4ga1 17 KNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVF-PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKES 92 (96)
T ss_dssp SCCEEEEECCSSCCCHHHHHHHHHHHSCEEEEEEE-TTTTEEEEEESSHHHHHHHHHHHTTCEETTEECEEECCCCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHhCCceEEEEE-ecceEEEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCC
Confidence 45799999999999999999999999999999864 56999999999999999999999999999999999999754
No 77
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=2.2e-15 Score=129.87 Aligned_cols=76 Identities=28% Similarity=0.367 Sum_probs=69.3
Q ss_pred ceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCC-ccCCceEEEEecCCCccc
Q 003009 279 TLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRS-DIAGKRIKLEPSRPGGAR 355 (858)
Q Consensus 279 tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~-~i~Gr~I~V~~s~~~~~r 355 (858)
+|||+|||.++|+++|+++|++||.|.++++. .++|||||+|.+.++|++|++.|||. .+.|++|+|+|+.++..|
T Consensus 3 ~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~~-~~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k~~r 79 (80)
T d2cqha1 3 KLYIGNLSPAVTADDLRQLFGDRKLPLAGQVL-LKSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKLR 79 (80)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHTTCCCSSCEE-EETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCCCCC
T ss_pred EEEEECCCCCCCHHHHHHHHHHhCcEEEeEEe-cccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCcCcC
Confidence 69999999999999999999999999877654 36899999999999999999999996 699999999999987654
No 78
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=1.4e-14 Score=127.80 Aligned_cols=78 Identities=14% Similarity=0.324 Sum_probs=70.3
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
...++|||+|||+++|+++|+++|++||+|..|++ +++++|||||+|.+.++|++|++. ...|.|+.|.|+++
T Consensus 6 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~~a 83 (90)
T d2cqga1 6 QKTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCKLP 83 (90)
T ss_dssp CCCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEECC
T ss_pred cCCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEEeC
Confidence 35689999999999999999999999999999874 588999999999999999999985 44789999999999
Q ss_pred CCCCC
Q 003009 265 IPKDN 269 (858)
Q Consensus 265 ~pk~~ 269 (858)
.+++.
T Consensus 84 ~~k~~ 88 (90)
T d2cqga1 84 NSKQS 88 (90)
T ss_dssp CTTCC
T ss_pred CCCCC
Confidence 87654
No 79
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=1.4e-14 Score=130.66 Aligned_cols=80 Identities=25% Similarity=0.412 Sum_probs=71.5
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
...++|||+|||+++++++|+++|++||+|.+|++ +++++|||||+|.+.++|++|++.+++ .|.|++|.|+++
T Consensus 8 ~~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kg~afV~f~~~~~A~~Ai~~~~~-~l~Gr~l~V~~a 86 (103)
T d2cqda1 8 TTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNP-IIDGRKANVNLA 86 (103)
T ss_dssp CSSSEEEEECCCSSCCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSC-EETTEECEEEES
T ss_pred CCCcEEEEeCCCCcCcHHHHHHHHhhcccccceeccccccccccCCeEEEEECCHHHHHHHHHHCCC-cCCCEEEEEEEc
Confidence 34578999999999999999999999999999985 477999999999999999999998875 799999999998
Q ss_pred CCCCCC
Q 003009 265 IPKDNP 270 (858)
Q Consensus 265 ~pk~~~ 270 (858)
.++..+
T Consensus 87 ~~~~~p 92 (103)
T d2cqda1 87 YLGAKP 92 (103)
T ss_dssp TTTCCC
T ss_pred CCCCCC
Confidence 765443
No 80
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=4e-15 Score=130.52 Aligned_cols=79 Identities=24% Similarity=0.459 Sum_probs=72.9
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCCCCC
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDN 269 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~pk~~ 269 (858)
..+++|||+|||+++|+++|+++|++||+|.+|++...++|||||+|.+.++|++|+. ++..|.|++|.|.++.++..
T Consensus 3 ~~s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~~k~~ 80 (88)
T d1wf0a_ 3 SGSSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAEPKHN 80 (88)
T ss_dssp SCCCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCCCCCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEeeccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCCCCCC
Confidence 4579999999999999999999999999999999888899999999999999999986 78889999999999987654
Q ss_pred C
Q 003009 270 P 270 (858)
Q Consensus 270 ~ 270 (858)
.
T Consensus 81 ~ 81 (88)
T d1wf0a_ 81 S 81 (88)
T ss_dssp C
T ss_pred C
Confidence 3
No 81
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=8.2e-15 Score=129.21 Aligned_cols=79 Identities=23% Similarity=0.593 Sum_probs=71.5
Q ss_pred CCCcEEEEeCCCCCCCHHHHHH----HhhcCCCEEEEEe--CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccc
Q 003009 190 HPSRTLFVRNINSNVEDSELRA----LFEQYGDIRTLYT--ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 263 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~----lFs~fG~I~sv~~--~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~ 263 (858)
+|+++|||+|||.+++++||++ +|++||+|.+|++ +++++|||||+|.+.++|.+|++.|+|..+.|++|.|.|
T Consensus 1 ~P~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~~ 80 (91)
T d1nu4a_ 1 RPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQY 80 (91)
T ss_dssp CCCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEEE
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEeeeccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEE
Confidence 4689999999999999999864 6899999999985 356899999999999999999999999999999999999
Q ss_pred cCCCC
Q 003009 264 SIPKD 268 (858)
Q Consensus 264 a~pk~ 268 (858)
+.++.
T Consensus 81 ak~~~ 85 (91)
T d1nu4a_ 81 AKTDS 85 (91)
T ss_dssp CSSCC
T ss_pred eCCCc
Confidence 97654
No 82
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1.5e-14 Score=128.68 Aligned_cols=82 Identities=21% Similarity=0.340 Sum_probs=71.8
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCC-EEEEEe------CCCcccEEEEEEcCHHHHHHHHHHhcCC--cccccccccc
Q 003009 192 SRTLFVRNINSNVEDSELRALFEQYGD-IRTLYT------ACKHRGFVMISYYDIRAARTAMRALQNK--PLRRRKLDIH 262 (858)
Q Consensus 192 s~tLfV~NLP~~vteeeLr~lFs~fG~-I~sv~~------~~ksrG~aFV~F~d~e~A~~Al~~Lng~--~l~gr~L~V~ 262 (858)
+++|||+|||.++++++|+++|++||+ |..+++ .++++|||||+|.+.++|.+|++.|++. .+.|++|+|.
T Consensus 1 n~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~ 80 (96)
T d2disa1 1 NCRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVD 80 (96)
T ss_dssp SEEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEE
Confidence 468999999999999999999999996 888874 3678999999999999999999999754 4579999999
Q ss_pred ccCCCCCCCCC
Q 003009 263 FSIPKDNPSDK 273 (858)
Q Consensus 263 ~a~pk~~~~~~ 273 (858)
||.|+..+..+
T Consensus 81 ~A~p~~~~~~~ 91 (96)
T d2disa1 81 WAEPEIDVDED 91 (96)
T ss_dssp ESCSSCSTTTC
T ss_pred EcCCCCCCChH
Confidence 99988766543
No 83
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=4.3e-15 Score=130.26 Aligned_cols=76 Identities=20% Similarity=0.336 Sum_probs=71.1
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCcc
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGA 354 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~~~ 354 (858)
..+|||+|||.++|+++|+++|++||.|.+|++...+++||||+|.+.++|++|+. ++..|.|++|+|++++++..
T Consensus 5 s~~lfV~nLp~~~te~~L~~~F~~~G~v~~v~~~~~~~gfafV~f~~~~~a~~a~~--~~~~i~g~~l~v~~a~~k~~ 80 (88)
T d1wf0a_ 5 SSGVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLCG--EDLIIKGISVHISNAEPKHN 80 (88)
T ss_dssp CCEEEEESCCSSSCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTTT--CEEEETTEEEEEECCCCCCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHcCCceEEEEeeccCceEEEEECCHHHHHHHHh--CCCEECCEEeEEEeCCCCCC
Confidence 46899999999999999999999999999999988899999999999999999986 78899999999999987653
No 84
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1.6e-14 Score=127.32 Aligned_cols=77 Identities=21% Similarity=0.391 Sum_probs=69.3
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~ 350 (858)
...+|||+|||+++|+++|+++|++||.|.+|++ ++.++|||||+|.+.++|++||+. +..++|+.|.|+++.
T Consensus 7 ~~~~lfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~srG~aFV~f~~~~~a~~al~~--~~~l~Gr~i~v~~a~ 84 (90)
T d2cqga1 7 KTSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQ--RHMIDGRWCDCKLPN 84 (90)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHS--CEEETTEEEEEECCC
T ss_pred CCCeEEEECCCCCCCHHHHHHHHHhhcccceeeeccCCCCcccCCEEEEEECCHHHHHHHHhc--CCccCCEEeEEEeCC
Confidence 3468999999999999999999999999999976 577899999999999999999985 458999999999998
Q ss_pred CCcc
Q 003009 351 PGGA 354 (858)
Q Consensus 351 ~~~~ 354 (858)
++..
T Consensus 85 ~k~~ 88 (90)
T d2cqga1 85 SKQS 88 (90)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 8653
No 85
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=9.3e-15 Score=125.54 Aligned_cols=73 Identities=23% Similarity=0.476 Sum_probs=68.0
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCC
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPG 352 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~ 352 (858)
.+||||+|++ +|+++|+++|++||.|.+|++.. .++||||+|.+.++|.+|++.|||..+.|++|+|+|++++
T Consensus 5 ~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~~~-~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~ 77 (79)
T d2bz2a1 5 GNTLYVYGED--MTPTLLRGAFSPFGNIIDLSMDP-PRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQ 77 (79)
T ss_dssp CCEEEEECSS--CCHHHHHHHHSTTCCCSCEEEET-TTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECCSS
T ss_pred CCEEEEECCC--CCHHHHHHHHhccCccceeeecc-CCCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEecCC
Confidence 4689999986 99999999999999999999864 5789999999999999999999999999999999999865
No 86
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=3.6e-15 Score=128.52 Aligned_cols=76 Identities=22% Similarity=0.367 Sum_probs=68.7
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCC-ccccccccccccCCCCC
Q 003009 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNK-PLRRRKLDIHFSIPKDN 269 (858)
Q Consensus 193 ~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~-~l~gr~L~V~~a~pk~~ 269 (858)
.+|||+|||.++|+++|+++|++||.|.++++ .+.+|||||+|.+.++|++|++.|+|. .+.|++|+|+|+.|+..
T Consensus 2 n~l~V~nLp~~~te~~L~~~F~~~G~i~~~~~-~~~rg~aFV~f~~~~~A~~Ai~~lng~~~~~G~~i~V~~a~~k~~ 78 (80)
T d2cqha1 2 NKLYIGNLSPAVTADDLRQLFGDRKLPLAGQV-LLKSGYAFVDYPDQNWAIRAIETLSGKVELHGKIMEVDYSVSKKL 78 (80)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHTTCCCSSCE-EEETTEEEECCSCHHHHHHHHHHHTTTCEETTEECEEEECCCCCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhCcEEEeEE-ecccceEEEEECCHHHHHHHHHHhCCCeEECCEEEEEEEcCCcCc
Confidence 47999999999999999999999999876543 457899999999999999999999996 59999999999998764
No 87
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.51 E-value=1.7e-14 Score=126.06 Aligned_cols=77 Identities=31% Similarity=0.558 Sum_probs=71.2
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCCCC
Q 003009 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (858)
Q Consensus 191 ~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~pk~ 268 (858)
..++|||+|||.++++++|+++|++||+|.+|++. +.+|||||+|.+.++|++|++.|+|..|.|++|+|+||.++.
T Consensus 7 ~~~~l~V~nLp~~~~~~~l~~~F~~~G~i~~i~~~-~~k~~afV~f~~~~~A~~A~~~l~g~~i~g~~l~V~~A~~~~ 83 (86)
T d2cpja1 7 QRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIH-KDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSA 83 (86)
T ss_dssp CTTEEEEESCCTTCCHHHHHHHTSTTCCCSEEEEE-TTTTEEEEECSSSHHHHHHHHHHTTCCBTTBCCEEEESSCCS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHhCCceEeeee-cccceEEEEECCHHHHHHHHHHhCCCEECCEEEEEEECCCcC
Confidence 34689999999999999999999999999999863 578999999999999999999999999999999999997654
No 88
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=6.5e-15 Score=127.41 Aligned_cols=74 Identities=20% Similarity=0.481 Sum_probs=67.7
Q ss_pred EEEeCCCCCCCHHHHHHHhhcCCCEEEE-Ee-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCCCC
Q 003009 195 LFVRNINSNVEDSELRALFEQYGDIRTL-YT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (858)
Q Consensus 195 LfV~NLP~~vteeeLr~lFs~fG~I~sv-~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~pk~ 268 (858)
|||+|||.++|+++|+++|++||.|.++ ++ +++++|||||+|.+.++|++|++.|+|..+.|++|+|+|+.++.
T Consensus 1 lfV~nLp~~~te~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~g~~~~gr~l~v~~a~~k~ 80 (83)
T d1x5ta1 1 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKD 80 (83)
T ss_dssp EEEECCCTTCCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHTTTTCEETTEECEEEESCCCC
T ss_pred CEEcCCCCcCcHHHHHHHHHHhCceeeeEEEEeeccccccCceEEEEECCHHHHHHHHHhCCCcEECCEEEEEEEecCCC
Confidence 7999999999999999999999998653 32 56789999999999999999999999999999999999998764
No 89
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1.1e-14 Score=130.40 Aligned_cols=80 Identities=24% Similarity=0.342 Sum_probs=70.9
Q ss_pred CCccceeeeCCCCCCchhHHHHhhcccCceEEEE--------e-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCC
Q 003009 275 LNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIR--------E-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAG 341 (858)
Q Consensus 275 ~~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~ir--------i-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~G 341 (858)
....+|||+|||..+|+++|+++|+.||.|..+. + +++++|||||+|.++++|++|++.|||..+.|
T Consensus 6 ~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 85 (101)
T d2cpea1 6 SDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQG 85 (101)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEECC
Confidence 4567999999999999999999999999886442 1 35678999999999999999999999999999
Q ss_pred ceEEEEecCCCcc
Q 003009 342 KRIKLEPSRPGGA 354 (858)
Q Consensus 342 r~I~V~~s~~~~~ 354 (858)
++|+|++++++..
T Consensus 86 r~i~V~~a~~~~p 98 (101)
T d2cpea1 86 SKLKVSLARKKPP 98 (101)
T ss_dssp EECEEECSSCCCC
T ss_pred EEEEEEEcCCCCC
Confidence 9999999987653
No 90
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=9.9e-15 Score=131.97 Aligned_cols=77 Identities=17% Similarity=0.306 Sum_probs=70.6
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~ 351 (858)
.++|||+|||+++|+++|+++|++||.|..+.+ ++.++|||||+|.+.++|++||+ ++|..|.|+.|.|+++.+
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~~ 98 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAVA 98 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCSS
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECcc
Confidence 368999999999999999999999999999987 35679999999999999999996 799999999999999988
Q ss_pred Ccc
Q 003009 352 GGA 354 (858)
Q Consensus 352 ~~~ 354 (858)
+..
T Consensus 99 ke~ 101 (103)
T d1x4ba1 99 REE 101 (103)
T ss_dssp CCC
T ss_pred cCC
Confidence 653
No 91
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.50 E-value=3.1e-14 Score=126.55 Aligned_cols=77 Identities=22% Similarity=0.396 Sum_probs=69.9
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhC------CCccCCceEE
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLN------RSDIAGKRIK 345 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~Ln------G~~i~Gr~I~ 345 (858)
.++|||+|||.++|+++|+++|++||.|.++++ .+.++|||||+|.+.++|.+|++.|| |..+.|++|+
T Consensus 8 ~~tlfV~nLp~~~te~~l~~~f~~~G~v~~~~~~~~~~~~~~~g~afV~F~~~~~a~~ai~~l~~~~~~~g~~~~gr~l~ 87 (98)
T d1x4ha1 8 GKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAASLEAEGGGLKLDGRQLK 87 (98)
T ss_dssp CCCEEEESCCTTCCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHHHCTTTTTCCEESSSCEEE
T ss_pred CCEEEEcCCCCcCCHHHHHHHHhccccceeeeeccccccccccceEEEEEcCHHHHHHHHHHcccccccCCcEECCEEEE
Confidence 468999999999999999999999999999976 34578999999999999999999987 5678999999
Q ss_pred EEecCCCc
Q 003009 346 LEPSRPGG 353 (858)
Q Consensus 346 V~~s~~~~ 353 (858)
|.++.++.
T Consensus 88 v~~a~~k~ 95 (98)
T d1x4ha1 88 VDLAVTRD 95 (98)
T ss_dssp EECCCCCC
T ss_pred EEECCCCC
Confidence 99998764
No 92
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=1.2e-14 Score=130.58 Aligned_cols=77 Identities=21% Similarity=0.278 Sum_probs=69.9
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~ 351 (858)
..++|||+|||.++|+++|+++|++||.|..+++ ++.++|||||+|.+.++|++|++.|||..|.|+++.|.+++|
T Consensus 17 ~~~~lfV~nLp~~~te~~L~~~F~~~G~i~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~i~gr~~~v~~~~P 96 (101)
T d1x5oa1 17 DPTNLYISNLPLSMDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEP 96 (101)
T ss_dssp CTTEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHHHBTCCCCCCTTSCCCSSC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhcccccceeeecccccccccceeEEeCCHHHHHHHHHHhCCCEECCcCCccCCCCC
Confidence 3468999999999999999999999999998865 455788999999999999999999999999999999888776
Q ss_pred C
Q 003009 352 G 352 (858)
Q Consensus 352 ~ 352 (858)
-
T Consensus 97 l 97 (101)
T d1x5oa1 97 L 97 (101)
T ss_dssp B
T ss_pred c
Confidence 4
No 93
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=1.6e-14 Score=124.10 Aligned_cols=75 Identities=20% Similarity=0.366 Sum_probs=69.3
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCCC
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 267 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~pk 267 (858)
+..++|||+||+ +|+++|+++|++||+|.++++ .+.+|||||+|.+.++|++|+++|+|..+.|++|+|+|++++
T Consensus 3 ~~~~ti~V~~~~--~te~~L~~~F~~~G~I~~v~~-~~~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~ 77 (79)
T d2bz2a1 3 RKGNTLYVYGED--MTPTLLRGAFSPFGNIIDLSM-DPPRNCAFVTYEKMESADQAVAELNGTQVESVQLKVNIARKQ 77 (79)
T ss_dssp CCCCEEEEECSS--CCHHHHHHHHSTTCCCSCEEE-ETTTTEEEEECSSHHHHHHHHHHHTTCBCSSCBCEEEECCSS
T ss_pred CCCCEEEEECCC--CCHHHHHHHHhccCccceeee-ccCCCEEEEEEcccHHHHHHHHHhCCCEECCEEEEEEEecCC
Confidence 456899999996 999999999999999999976 467899999999999999999999999999999999999764
No 94
>d2ghpa3 d.58.7.1 (A:206-291) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.50 E-value=9.2e-15 Score=127.60 Aligned_cols=76 Identities=18% Similarity=0.394 Sum_probs=67.5
Q ss_pred CCcEEEEeCCCCCCC-HHHHHHHhhcCCCEEEEEe------CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccc
Q 003009 191 PSRTLFVRNINSNVE-DSELRALFEQYGDIRTLYT------ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 263 (858)
Q Consensus 191 ~s~tLfV~NLP~~vt-eeeLr~lFs~fG~I~sv~~------~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~ 263 (858)
..++|||+|||.+++ +++|+++|++||+|.+|++ +++++|||||+|.+.++|++|++ |++..|.|++|+|+|
T Consensus 3 e~~~l~V~nLp~~~t~ed~l~~~F~~~G~i~~v~i~~~~~~~~~~kg~afV~f~~~~~a~~Al~-~n~~~~~gr~l~V~~ 81 (86)
T d2ghpa3 3 EGREIMIRNLSTELLDENLLRESFEGFGSIEKINIPAGQKEHSFNNCCAFMVFENKDSAERALQ-MNRSLLGNREISVSL 81 (86)
T ss_dssp TTTEEEEEEECTTTCCHHHHHHHHGGGSCEEEEECCSCCC---CCCEEEEEEESSHHHHHHHGG-GTTEEETTEEEEEEE
T ss_pred CCCEEEEECCCCCcccHHHHHHHHHhhhhccceeeecccCCccccceeeeEEECCHHHHHHHHh-cCCCEECCEEEEEEE
Confidence 368999999999986 5669999999999999984 45789999999999999999995 999999999999999
Q ss_pred cCCC
Q 003009 264 SIPK 267 (858)
Q Consensus 264 a~pk 267 (858)
+.++
T Consensus 82 a~~k 85 (86)
T d2ghpa3 82 ADKK 85 (86)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9764
No 95
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=8.2e-15 Score=131.51 Aligned_cols=80 Identities=21% Similarity=0.406 Sum_probs=73.4
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~-----~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
.++++|||+|||.++++++|+++|++||.|..++ .+++++|||||+|.+.++|++|++.|+|..|.|++|+|+|+
T Consensus 16 ~ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~a 95 (102)
T d2cpxa1 16 EPNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFG 95 (102)
T ss_dssp SCCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeC
Confidence 4679999999999999999999999999877654 36789999999999999999999999999999999999999
Q ss_pred CCCCC
Q 003009 265 IPKDN 269 (858)
Q Consensus 265 ~pk~~ 269 (858)
.+++.
T Consensus 96 k~k~~ 100 (102)
T d2cpxa1 96 KNKKQ 100 (102)
T ss_dssp CCCSC
T ss_pred CCccc
Confidence 88654
No 96
>d1nu4a_ d.58.7.1 (A:) Splicesomal U1A protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=1.2e-14 Score=128.16 Aligned_cols=78 Identities=22% Similarity=0.448 Sum_probs=70.5
Q ss_pred ccceeeeCCCCCCchhHHHH----hhcccCceEEEEeC--CCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 003009 277 QGTLVVFNLDPSVSNEDLRQ----IFGAYGEVKEIRET--PHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~----~Fs~fG~I~~irit--~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~ 350 (858)
.++|||+|||.+++++||++ +|++||+|.+|++. ++++|||||+|.+.++|.+|++.|||..+.|+.|.|.|++
T Consensus 3 ~~tl~V~nLp~~~t~~dl~~~l~~~f~~~G~i~~i~~~~~~~~~g~afV~F~~~~~A~~A~~~~~~~~~~g~~l~v~~ak 82 (91)
T d1nu4a_ 3 NHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAK 82 (91)
T ss_dssp CSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEETTEECEEEECS
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHhcccccccceEEeeeccCCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEeC
Confidence 46899999999999999864 68999999999874 3468999999999999999999999999999999999998
Q ss_pred CCcc
Q 003009 351 PGGA 354 (858)
Q Consensus 351 ~~~~ 354 (858)
++..
T Consensus 83 ~~~~ 86 (91)
T d1nu4a_ 83 TDSD 86 (91)
T ss_dssp SCCT
T ss_pred CCch
Confidence 8654
No 97
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=8.7e-15 Score=131.33 Aligned_cols=80 Identities=29% Similarity=0.343 Sum_probs=73.1
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~ 350 (858)
+.++|||+|||.++++++|+++|+.||.|..+++ +++++|||||+|.+.++|++|++.|||..+.|++|+|+|++
T Consensus 17 ps~tl~V~nLp~~~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~~fV~f~~~~~A~~Ai~~l~g~~~~g~~l~V~~ak 96 (102)
T d2cpxa1 17 PNKVLYLKNLSPRVTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKILVIEFGK 96 (102)
T ss_dssp CCSEEEEECCCTTCCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBCEEEECC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHhhccceeeEEeecccccccccccceEEeccHHHHHHHHHHhCCCEECCEEEEEEeCC
Confidence 4568999999999999999999999999887643 57789999999999999999999999999999999999999
Q ss_pred CCccc
Q 003009 351 PGGAR 355 (858)
Q Consensus 351 ~~~~r 355 (858)
++..|
T Consensus 97 ~k~~r 101 (102)
T d2cpxa1 97 NKKQR 101 (102)
T ss_dssp CCSCC
T ss_pred CcccC
Confidence 87654
No 98
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=3.1e-14 Score=123.80 Aligned_cols=74 Identities=19% Similarity=0.338 Sum_probs=67.8
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~ 350 (858)
..++|||+|||.++|+++|+++|++||.|.++++ ++.++|||||+|.+.++|++||+ ++++.|.|++|+|+.|.
T Consensus 5 ~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp GGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 3468999999999999999999999999999976 46789999999999999999997 69999999999998774
No 99
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.49 E-value=9.5e-15 Score=125.08 Aligned_cols=71 Identities=28% Similarity=0.443 Sum_probs=66.0
Q ss_pred cceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 003009 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (858)
Q Consensus 278 ~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s 349 (858)
++|||+|||.++|+++|+++|++||.|+++++ +++++|||||+|.+.++|++|++ +|++.++|+.|+|+.|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 47999999999999999999999999999875 46789999999999999999997 7999999999999876
No 100
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=2.3e-14 Score=121.83 Aligned_cols=70 Identities=20% Similarity=0.371 Sum_probs=64.4
Q ss_pred ceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 003009 279 TLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (858)
Q Consensus 279 tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s 349 (858)
+|||+|||+++|+++|+++|++||.|.++++ +++++|||||+|.+.++|++||+ +++..+.|+.|+|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 4899999999999999999999999999986 46678999999999999999997 7999999999998653
No 101
>d1wf2a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoproteins C1/C2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=2.6e-14 Score=127.96 Aligned_cols=76 Identities=28% Similarity=0.520 Sum_probs=69.2
Q ss_pred CCCcEEEEeCCC-CCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCCCC
Q 003009 190 HPSRTLFVRNIN-SNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (858)
Q Consensus 190 ~~s~tLfV~NLP-~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~pk~ 268 (858)
...++|||+||| ..+++++|+++|++||.|.+|++ ++|||||+|.+.++|++|++.|+|..|.|++|+|+|+.++.
T Consensus 13 ~~~~~lfV~nL~~~~~~~~~L~~~F~~~G~i~~~~i---~rg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l~V~~a~~~~ 89 (98)
T d1wf2a_ 13 SMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSV---HKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPK 89 (98)
T ss_dssp SCCCCEEEEEECTTTCCHHHHHHSSTTSSCEEEEEE---ETEEEEEEESSHHHHHHHHHTTTTCEETTEECEEEETTSCC
T ss_pred CCCcEEEEeCCCcccCCHHHHHHHHhhcCCEEEEEE---eCCeEEEEECCHHHHHHHHHHcCCCEECCEEEEEEECCCCC
Confidence 345789999997 57889999999999999999987 68999999999999999999999999999999999997643
No 102
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=1.7e-14 Score=129.11 Aligned_cols=81 Identities=22% Similarity=0.372 Sum_probs=71.8
Q ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-------------eCCCcccEEEEEEcCHHHHHHHHHHhcCCcc
Q 003009 188 GEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-------------TACKHRGFVMISYYDIRAARTAMRALQNKPL 254 (858)
Q Consensus 188 ~~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~-------------~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l 254 (858)
.+...++|||+|||.++|+++|+++|++||.|..+. .+++++|||||+|.+.++|++|++.|+|..|
T Consensus 4 ~~~~~~~i~V~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~d~~~~~~~g~afV~f~~~~~a~~Ai~~l~g~~~ 83 (101)
T d2cpea1 4 EDSDNSAIYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDF 83 (101)
T ss_dssp CCCCCCEEEEECCCTTCCHHHHHHHHTTTSCBCBCSSSCCBSEECCBCTTTCSBCSEEEEEBSSHHHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEECCCCcCCHHHHHHHHHHCceEEEeeecccceeEEeeccccccccceeeEEecCHHHHHHHHHHhCCCEE
Confidence 345678999999999999999999999999885432 1467889999999999999999999999999
Q ss_pred ccccccccccCCCC
Q 003009 255 RRRKLDIHFSIPKD 268 (858)
Q Consensus 255 ~gr~L~V~~a~pk~ 268 (858)
.|++|+|+|+.++.
T Consensus 84 ~gr~i~V~~a~~~~ 97 (101)
T d2cpea1 84 QGSKLKVSLARKKP 97 (101)
T ss_dssp TTEECEEECSSCCC
T ss_pred CCEEEEEEEcCCCC
Confidence 99999999998754
No 103
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.49 E-value=3.7e-14 Score=120.66 Aligned_cols=72 Identities=15% Similarity=0.335 Sum_probs=65.7
Q ss_pred eeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 003009 280 LVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (858)
Q Consensus 280 LfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~~ 353 (858)
|||+|||+++++++|+++|++|| ++.+++ .+++|||||+|.+.++|++|++.|||..+.|++|+|++++...
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~~-~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d~ 72 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCFV-DKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTDA 72 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEEE-ETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCSTT
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-ccceee-cccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCCC
Confidence 79999999999999999999999 555555 4578999999999999999999999999999999999997653
No 104
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=2.2e-14 Score=129.64 Aligned_cols=77 Identities=18% Similarity=0.436 Sum_probs=71.0
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCC
Q 003009 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIP 266 (858)
Q Consensus 192 s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~p 266 (858)
.++|||+|||+++++++|+++|++||+|..+.+ +++++|||||+|.+.++|++|++ +++..|.|++|.|.+|.+
T Consensus 20 ~~~lfVgnLp~~~te~~L~~~F~~~G~i~~~~i~~d~~~~~~kg~aFV~f~~~~~a~~al~-~~~~~l~G~~i~V~~a~~ 98 (103)
T d1x4ba1 20 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRAVA 98 (103)
T ss_dssp HTEEEEECCTTCCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHT-SCSEEETTEEEEEECCSS
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHhhCcccceeecccccCCCccCeEEEEECCHHHHHHHHH-hCCCeECCEEEEEEECcc
Confidence 479999999999999999999999999999885 46799999999999999999996 799999999999999988
Q ss_pred CCC
Q 003009 267 KDN 269 (858)
Q Consensus 267 k~~ 269 (858)
++.
T Consensus 99 ke~ 101 (103)
T d1x4ba1 99 REE 101 (103)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
No 105
>d1hd0a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein d0 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=4.1e-14 Score=120.27 Aligned_cols=70 Identities=14% Similarity=0.386 Sum_probs=65.0
Q ss_pred EEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 194 TLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 194 tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
+|||+|||+++++++|+++|++||+|..+++ +++++|||||+|.+.++|++|++ +++..|.|++|.|+.|
T Consensus 1 klfV~nl~~~~te~~l~~~F~~~G~i~~~~i~~d~~t~~~kg~afV~f~~~~~a~~Al~-~~~~~l~Gr~i~V~rA 75 (75)
T d1hd0a_ 1 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMD-QKEHKLNGKVIDPKRA 75 (75)
T ss_dssp CEEEECCCTTCCHHHHHHHHHTTSCEEEEECCCBTTTTBCCSEEEEEESSHHHHHHHHH-TCCCCBTTBCCEECCC
T ss_pred CEEEeCCCCcCCHHHHHHHHHhhccccccccccCCCCCCcCceEEEEECCHHHHHHHHh-cCCCEECCCEEEeeEC
Confidence 4899999999999999999999999999984 57899999999999999999997 7999999999998754
No 106
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=3.9e-14 Score=123.08 Aligned_cols=74 Identities=23% Similarity=0.447 Sum_probs=68.3
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccC
Q 003009 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (858)
Q Consensus 191 ~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~ 265 (858)
..++|||+|||.++++++|+++|++||+|..+++ +++++|||||+|.+.++|++|++ +++..|.|++|+|+.|.
T Consensus 5 ~~~~lfV~nlp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~a~~ai~-~~~~~i~Gr~i~V~~A~ 83 (84)
T d1l3ka1 5 QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN-ARPHKVDGRVVEPKRAV 83 (84)
T ss_dssp GGGEEEEESCCTTCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-TCSCEETTEECEEEECC
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHhhccccceeecccccCCCcccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEeee
Confidence 3479999999999999999999999999999874 57899999999999999999997 69999999999998874
No 107
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=2.8e-14 Score=120.71 Aligned_cols=70 Identities=20% Similarity=0.340 Sum_probs=64.9
Q ss_pred ceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 003009 279 TLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (858)
Q Consensus 279 tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s 349 (858)
+|||+|||+++|+++|+++|+.||.|..+.+ ++.+++||||+|.+.++|++|++ |||+.++|+.|+|++|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 4899999999999999999999999999865 45678999999999999999996 9999999999999875
No 108
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=6.1e-14 Score=125.06 Aligned_cols=77 Identities=22% Similarity=0.404 Sum_probs=70.6
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCC--ceEEEEecCCCc
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAG--KRIKLEPSRPGG 353 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~G--r~I~V~~s~~~~ 353 (858)
+..+|||+|||.++|+++|+++|++||.|+.+++.. .++||||+|.+.++|++|++.|||..|.| ++|+|+|+++..
T Consensus 16 Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~~-~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ak~~~ 94 (97)
T d1whya_ 16 PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVK-GDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKSGP 94 (97)
T ss_dssp CCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEECS-SSCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEECCCCC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeeec-cccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeCCCCC
Confidence 457999999999999999999999999999999864 47899999999999999999999999986 589999998753
No 109
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.47 E-value=1e-14 Score=128.86 Aligned_cols=76 Identities=24% Similarity=0.335 Sum_probs=69.2
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~ 351 (858)
...+|||+|||+++|+++|+++|+.||.|..+++ +++++|||||+|.+.++|++||+ |||..+.|+.|+|++++.
T Consensus 12 ~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ak~ 90 (91)
T d1fjeb1 12 TPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPKG 90 (91)
T ss_dssp SSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECCCC
T ss_pred CCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEecCC
Confidence 4568999999999999999999999999887754 56789999999999999999996 999999999999999876
Q ss_pred C
Q 003009 352 G 352 (858)
Q Consensus 352 ~ 352 (858)
+
T Consensus 91 k 91 (91)
T d1fjeb1 91 R 91 (91)
T ss_dssp S
T ss_pred C
Confidence 3
No 110
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=1.8e-14 Score=125.99 Aligned_cols=72 Identities=21% Similarity=0.205 Sum_probs=67.0
Q ss_pred ceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCC
Q 003009 279 TLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPG 352 (858)
Q Consensus 279 tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~ 352 (858)
+|||+|||+++|+++|+++|++||.|.++++. +.|||||+|.+.++|++||+.|||..+.|+.|+|.+.++.
T Consensus 2 rvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~--~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~ 73 (87)
T d3begb1 2 RVVVSGLPPSGSWQDLKDHMREAGDVCYADVY--RDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVK 73 (87)
T ss_dssp CEEEEECCSSCCTTHHHHHHGGGSCEEEEEEC--TTSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEE
T ss_pred eEEEECCCCcCCHHHHHHHHhhhccccccccc--ccceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecC
Confidence 69999999999999999999999999999985 3589999999999999999999999999999999887544
No 111
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=2.2e-14 Score=130.43 Aligned_cols=77 Identities=25% Similarity=0.305 Sum_probs=69.4
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEEEeC-CCCccEEEEEEcCHHHHHHHHHHhCCCcc--CCceEEEEecCCCc
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRET-PHKRHHKFIEFYDVRAAEAALKSLNRSDI--AGKRIKLEPSRPGG 353 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit-~~srG~aFVeF~d~e~A~kAl~~LnG~~i--~Gr~I~V~~s~~~~ 353 (858)
..+|||+|||+++|+++|+++|++||.|++|++. .+++|+|||+|.++++|++|++.|||..| .|++|+|.+++++.
T Consensus 7 ~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~s~~~~ 86 (108)
T d2adba1 7 VLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTS 86 (108)
T ss_dssp EEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEECSSCS
T ss_pred eEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeCCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEecCCcc
Confidence 4579999999999999999999999999999874 34689999999999999999999999988 47899999998754
No 112
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=4.4e-14 Score=128.37 Aligned_cols=81 Identities=21% Similarity=0.286 Sum_probs=71.7
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-CCCcccEEEEEEcCHHHHHHHHHHhcCCcc--ccccccccccC
Q 003009 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-ACKHRGFVMISYYDIRAARTAMRALQNKPL--RRRKLDIHFSI 265 (858)
Q Consensus 189 ~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l--~gr~L~V~~a~ 265 (858)
..+..+|||+|||+++|+++|+++|++||+|.+|++ ..+++|||||+|.+.++|++|+..|+|..| .+++|+|.|+.
T Consensus 4 ~s~~~~v~V~NL~~~vte~~L~~~F~~~G~i~~~~i~~~~~~g~aFV~f~~~e~A~~Ai~~ln~~~l~~~~~~l~v~~s~ 83 (108)
T d2adba1 4 QSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSK 83 (108)
T ss_dssp CCCEEEEESCSCCSTTHHHHHHHHHTTTSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHHHSCCSSTTCCCCEEEECS
T ss_pred CCCeEEEEEeCcCCCCCHHHHHHHHccCCcEEEEEEEeeCCCCeEEEEECCHHHHHHHHHHHCCCEeccCCcEEEEEecC
Confidence 345688999999999999999999999999999875 345789999999999999999999999998 47889999987
Q ss_pred CCCC
Q 003009 266 PKDN 269 (858)
Q Consensus 266 pk~~ 269 (858)
++..
T Consensus 84 ~~~~ 87 (108)
T d2adba1 84 LTSL 87 (108)
T ss_dssp SCSC
T ss_pred Cccc
Confidence 7543
No 113
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=5.4e-14 Score=125.81 Aligned_cols=79 Identities=14% Similarity=0.209 Sum_probs=72.1
Q ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCCC
Q 003009 188 GEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 267 (858)
Q Consensus 188 ~~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~pk 267 (858)
.....++|||+|||+++++++|+++|++||+|..+.+. .+|||||+|.+.++|++|++.|+|..|.|+.|+|.|+.++
T Consensus 11 ~~~~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~--~~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~~ 88 (98)
T d1wg4a_ 11 TRRSDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQ--KDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVY 88 (98)
T ss_dssp CCSCSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEE--TTTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEEE
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHhhccccccccc--ccceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEecC
Confidence 34567899999999999999999999999999999863 5799999999999999999999999999999999998755
Q ss_pred C
Q 003009 268 D 268 (858)
Q Consensus 268 ~ 268 (858)
.
T Consensus 89 ~ 89 (98)
T d1wg4a_ 89 P 89 (98)
T ss_dssp C
T ss_pred C
Confidence 4
No 114
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.47 E-value=7.2e-14 Score=124.57 Aligned_cols=77 Identities=29% Similarity=0.515 Sum_probs=70.4
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCcccc--ccccccccCCC
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRR--RKLDIHFSIPK 267 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~g--r~L~V~~a~pk 267 (858)
.++++|||+|||.++++++|+++|++||+|..+++. +.++||||+|.+.++|++|++.|++..|.+ ++|+|+|+++.
T Consensus 15 ~Ps~tl~V~nLp~~~t~~~l~~~f~~~G~i~~~~~~-~~~~~afV~f~~~~~A~~A~~~l~~~~i~g~~~~l~v~~ak~~ 93 (97)
T d1whya_ 15 NPTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHV-KGDSFAYIQYESLDAAQAACAKMRGFPLGGPDRRLRVDFAKSG 93 (97)
T ss_dssp CCCSCEEEECCCSSCCHHHHHHHHHTTSCEEEEEEC-SSSCCEEEEESSHHHHHHHHHHHTTCBCSSSSCBCEEEECCCC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhcccceEeee-ccccEEEeccCCHHHHHHHHHHhCCCEeCCCceEEEEEeCCCC
Confidence 467999999999999999999999999999999864 568999999999999999999999999976 58999998754
No 115
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=5.1e-14 Score=120.46 Aligned_cols=71 Identities=18% Similarity=0.359 Sum_probs=65.4
Q ss_pred cceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 003009 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (858)
Q Consensus 278 ~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s 349 (858)
++|||+|||+++|+++|+++|++||.|..+++ ++.++|||||+|.+.++|++|++ |+|+.|.|+.|+|+.|
T Consensus 3 r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 3 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp SEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 57999999999999999999999999999876 45678999999999999999995 8999999999999875
No 116
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=3.3e-14 Score=124.64 Aligned_cols=76 Identities=14% Similarity=0.309 Sum_probs=67.3
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCCCC
Q 003009 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (858)
Q Consensus 191 ~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~pk~ 268 (858)
.+++|||+|||++++++||+++|++||. ..+. ..+.+|||||+|.+.++|++|++.|++..|.|++|+|+|+.++.
T Consensus 4 ~s~~i~V~nLp~~~t~~~l~~lF~~~G~-~~~~-~~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~~~ 79 (88)
T d1wg1a_ 4 GSSGILVKNLPQDSNCQEVHDLLKDYDL-KYCY-VDRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDA 79 (88)
T ss_dssp CCCCEEEESCCSSCCHHHHHHHTCSSCC-CCEE-EEGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCCCC
T ss_pred CCCEEEEeCCCCccChHHHHHHHHhcCc-eeee-eeccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 4689999999999999999999999992 2232 35789999999999999999999999999999999999996543
No 117
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=1.9e-14 Score=126.24 Aligned_cols=75 Identities=13% Similarity=0.290 Sum_probs=66.2
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~~ 353 (858)
..+|||+|||.+++++||+++|++|| ++.+.+ ...++||||+|.+.++|++|++.|||..+.|++|+|++++++.
T Consensus 5 s~~i~V~nLp~~~t~~~l~~lF~~~G-~~~~~~-~~~kg~afV~f~~~~~A~~Ai~~ln~~~~~G~~l~V~~a~~~~ 79 (88)
T d1wg1a_ 5 SSGILVKNLPQDSNCQEVHDLLKDYD-LKYCYV-DRNKRTAFVTLLNGEQAQNAIQMFHQYSFRGKDLIVQLQPTDA 79 (88)
T ss_dssp CCCEEEESCCSSCCHHHHHHHTCSSC-CCCEEE-EGGGTEEEECCSCHHHHHHHHHHHTTEEETTEEEEEEECCCCC
T ss_pred CCEEEEeCCCCccChHHHHHHHHhcC-ceeeee-eccCCceEEEECCHHHHHHHHHHhCCCEECCEEEEEEEcCCCC
Confidence 45899999999999999999999999 333333 4568999999999999999999999999999999999997653
No 118
>d1l3ka2 d.58.7.1 (A:103-181) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=5.2e-14 Score=120.40 Aligned_cols=72 Identities=24% Similarity=0.484 Sum_probs=66.8
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 192 s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
.++|||+|||+++|+++|+++|++||.|..+.+ +++++|||||+|.+.++|++|++ ++|..|.|++|.|+.|
T Consensus 2 ~r~lfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~g~afV~f~~~e~~~~al~-~~~~~l~Gr~i~V~~A 78 (79)
T d1l3ka2 2 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKA 78 (79)
T ss_dssp CSEEEEECCTTTCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH-CSCCEETTEECEEEEC
T ss_pred CCEEEECCCCCcCCHHHHHHHHHHhccccccccccCCCCcccccEEEEEEcCHHHHHHHHH-hCCCEECCEEEEEEEC
Confidence 479999999999999999999999999999874 66789999999999999999996 8999999999999876
No 119
>d2cq4a1 d.58.7.1 (A:132-232) RNA binding protein 23 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=1.1e-14 Score=131.19 Aligned_cols=75 Identities=17% Similarity=0.385 Sum_probs=69.7
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccC
Q 003009 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (858)
Q Consensus 191 ~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~ 265 (858)
..++|||+|||.++++++|+++|+.||+|.+|++ +++++|||||+|.+.++|++|+. |+|..|.|++|.|+++.
T Consensus 17 ~~~tifV~nL~~~~te~~l~~~F~~~G~V~~v~i~~d~~tg~~kG~afV~F~~~e~a~~A~~-l~g~~~~G~~l~V~~a~ 95 (101)
T d2cq4a1 17 DARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG-LTGQRLLGVPIIVQASQ 95 (101)
T ss_dssp HHTEEEEESCCTTCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH-HTTEEETTEEEEEEEHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHcCCCeEEEEEeeecCCCccccceEEEEECCHHHHHHHHH-HCCCEECCEEEEEEECC
Confidence 4589999999999999999999999999999984 57899999999999999999995 99999999999999875
Q ss_pred C
Q 003009 266 P 266 (858)
Q Consensus 266 p 266 (858)
+
T Consensus 96 ~ 96 (101)
T d2cq4a1 96 A 96 (101)
T ss_dssp H
T ss_pred C
Confidence 4
No 120
>d1uawa_ d.58.7.1 (A:) Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.46 E-value=1.6e-14 Score=123.65 Aligned_cols=71 Identities=17% Similarity=0.428 Sum_probs=66.2
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 193 ~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
++|||+|||+++|+++|+++|++||+|.++++ +++++|||||+|.+.++|++|++ ++++.+.|++|.|++|
T Consensus 1 cklfV~nLp~~~te~~l~~~F~~~G~i~~v~i~~d~~tg~~kG~aFV~f~~~~~a~~al~-~~~~~i~Gr~i~V~~A 76 (77)
T d1uawa_ 1 CKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLA-QSRHELDSKTIDPKVA 76 (77)
T ss_dssp CCEEEESCCSSCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHH-TTTCCCSSCCCEEEEC
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHhCCcceeeeecccCCCCccceEEEEECCHHHHHHHHH-cCCCEECCeEEEEEEC
Confidence 57999999999999999999999999988874 58899999999999999999997 7999999999999876
No 121
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=1.1e-13 Score=120.94 Aligned_cols=79 Identities=24% Similarity=0.353 Sum_probs=71.0
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhc--CCccccccccccccCC
Q 003009 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ--NKPLRRRKLDIHFSIP 266 (858)
Q Consensus 189 ~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Ln--g~~l~gr~L~V~~a~p 266 (858)
..|+++|||+|||.++++++|+++|++||.|..+++ .+.+|||||+|.+.++|++|+..++ +..+.|++|+|.|+..
T Consensus 5 ~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~-~~~~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~sk~ 83 (88)
T d2cq1a1 5 GAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILM-LKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNH 83 (88)
T ss_dssp SSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEE-ETTTTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEECSC
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhcccccccccc-cccceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEECCC
Confidence 468899999999999999999999999999999975 4578999999999999999998764 5678999999999976
Q ss_pred CC
Q 003009 267 KD 268 (858)
Q Consensus 267 k~ 268 (858)
+.
T Consensus 84 ~~ 85 (88)
T d2cq1a1 84 KE 85 (88)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 122
>d1fjeb1 d.58.7.1 (B:1-91) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=99.45 E-value=9.9e-15 Score=128.92 Aligned_cols=77 Identities=16% Similarity=0.216 Sum_probs=69.6
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE----eCCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccC
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~----~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~ 265 (858)
...++|||+|||.++++++|+++|++||.|..++ .+++++|||||+|.+.++|++|++ |++..+.|++|+|.++.
T Consensus 11 ~~~~~ifV~nL~~~~te~~l~~~F~~~G~i~~~~v~~~~~g~~kg~afv~F~~~e~a~~Al~-~~g~~~~g~~i~V~~ak 89 (91)
T d1fjeb1 11 TTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALE-LTGLKVFGNEIKLEKPK 89 (91)
T ss_dssp SSSEEEEEECCCTTSCHHHHHHHHHHHHHHHTCCCCEEEEETTTTEEEEEESSHHHHHHHHH-GGGEEETTEEEEEECCC
T ss_pred CCCcEEEEeCccCcchHHHHHHHHhcCCcEEEeeeeecCCCCccEEeEEeeCCHHHHHHHHh-cCCcEECCEEEEEEecC
Confidence 4567999999999999999999999999876654 368899999999999999999996 99999999999999987
Q ss_pred CC
Q 003009 266 PK 267 (858)
Q Consensus 266 pk 267 (858)
.+
T Consensus 90 ~k 91 (91)
T d1fjeb1 90 GR 91 (91)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 123
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.45 E-value=8e-14 Score=118.55 Aligned_cols=71 Identities=18% Similarity=0.450 Sum_probs=65.0
Q ss_pred EEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCCC
Q 003009 195 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 267 (858)
Q Consensus 195 LfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~pk 267 (858)
|||+|||+++++++|+++|++|| +..++ ..+++|||||+|.+.++|++|+..|+|..+.|++|+|+|+...
T Consensus 1 i~V~nLp~~~t~~~l~~~F~~~g-~~~~~-~~~~~g~afv~f~~~~~A~~Ai~~ln~~~~~g~~l~V~~a~~d 71 (75)
T d1wi6a1 1 ILIRGLPGDVTNQEVHDLLSDYE-LKYCF-VDKYKGTAFVTLLNGEQAEAAINTFHQSRLRERELSVQLQPTD 71 (75)
T ss_dssp EEEECCCTTCCHHHHHHHTTTSC-EEEEE-EETTTTEEEEEESSHHHHHHHHHHHTTEESSSCEEEEEECCST
T ss_pred CEEeCCCCcCCHHHHHHHHhccc-cccee-ecccceeEEEEECCHHHHHHHHHHhCCccCCCCEEEEEEeCCC
Confidence 79999999999999999999999 55554 4678999999999999999999999999999999999999543
No 124
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=4.3e-14 Score=123.51 Aligned_cols=74 Identities=15% Similarity=0.181 Sum_probs=67.8
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccccCCCC
Q 003009 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD 268 (858)
Q Consensus 193 ~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~pk~ 268 (858)
.+|||+|||+++++++|+++|++||+|..+++. ..|||||+|.+.++|++|++.|+|..|.|+.|+|.++.++.
T Consensus 1 nrvfV~nlp~~~~~~~l~~~F~~~G~v~~~~i~--~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~i~v~~~~~~~ 74 (87)
T d3begb1 1 NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVY--RDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKV 74 (87)
T ss_dssp CCEEEEECCSSCCTTHHHHHHGGGSCEEEEEEC--TTSEEEEEESSHHHHHHHHHHHTTCBCCCTTSCCCBCEEEE
T ss_pred CeEEEECCCCcCCHHHHHHHHhhhccccccccc--ccceeeEEeCCHHHHHHHHHHhCCCEECCcEeEEeEEecCc
Confidence 369999999999999999999999999999863 45999999999999999999999999999999999876543
No 125
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=1.3e-13 Score=124.04 Aligned_cols=79 Identities=16% Similarity=0.387 Sum_probs=68.7
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe------CCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccc
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT------ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 263 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~------~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~ 263 (858)
.+.++|||+|||+++|+++|+++|++|| |..+++ +++++|||||+|.+.++|++|+ .|++..|.|++|+|.|
T Consensus 13 ~p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~ 90 (104)
T d1wi8a_ 13 SPPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDV 90 (104)
T ss_dssp SSCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEE
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEE
Confidence 4669999999999999999999999999 555552 4668899999999999998776 5999999999999999
Q ss_pred cCCCCCC
Q 003009 264 SIPKDNP 270 (858)
Q Consensus 264 a~pk~~~ 270 (858)
+.++...
T Consensus 91 a~~~~~~ 97 (104)
T d1wi8a_ 91 ADQAQDK 97 (104)
T ss_dssp CCCCCCC
T ss_pred CCCCCCC
Confidence 9876543
No 126
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.44 E-value=6.9e-14 Score=122.86 Aligned_cols=71 Identities=14% Similarity=0.388 Sum_probs=63.8
Q ss_pred ccceeeeCCCCCCchhHH---HHhhcccCceEEEEeC-----C---CCccEEEEEEcCHHHHHHHHHHhCCCccCCceEE
Q 003009 277 QGTLVVFNLDPSVSNEDL---RQIFGAYGEVKEIRET-----P---HKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIK 345 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL---~~~Fs~fG~I~~irit-----~---~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~ 345 (858)
..+|||+|||+++++++| +++|++||.|++|++. + ..+|||||+|.+.++|++|++.|||..++|+.|+
T Consensus 8 ~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~lk 87 (89)
T d2cpia1 8 KNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLK 87 (89)
T ss_dssp SSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEEE
T ss_pred cCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEEE
Confidence 457999999999999999 7899999999999873 1 2348999999999999999999999999999999
Q ss_pred EE
Q 003009 346 LE 347 (858)
Q Consensus 346 V~ 347 (858)
|+
T Consensus 88 vS 89 (89)
T d2cpia1 88 AS 89 (89)
T ss_dssp EE
T ss_pred EC
Confidence 85
No 127
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=8.3e-14 Score=123.80 Aligned_cols=77 Identities=19% Similarity=0.232 Sum_probs=68.3
Q ss_pred cceeeeCCCCCCchhHHHHhhcccCc-eEEEEeC------CCCccEEEEEEcCHHHHHHHHHHhCCC--ccCCceEEEEe
Q 003009 278 GTLVVFNLDPSVSNEDLRQIFGAYGE-VKEIRET------PHKRHHKFIEFYDVRAAEAALKSLNRS--DIAGKRIKLEP 348 (858)
Q Consensus 278 ~tLfV~NLp~~vTeedL~~~Fs~fG~-I~~irit------~~srG~aFVeF~d~e~A~kAl~~LnG~--~i~Gr~I~V~~ 348 (858)
++|||+|||.++|+++|+++|+.||. |.++++. +.++|||||+|.+.++|.+|++.|++. .+.|+.|+|+|
T Consensus 2 ~rLyV~nLp~~~te~~l~~~f~~~g~~i~~v~~~~~~~~~~~~rg~aFV~F~~~~~A~~Ai~~l~~~~~~~~g~~i~V~~ 81 (96)
T d2disa1 2 CRLFIGGIPKMKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDW 81 (96)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBCCEEEE
T ss_pred CEEEEcCCCCcCCHHHHHHHHHHhCCcceEEEEeeeccccccCCCeEEEEEcCHHHHHHHHHHHcCCCeEECCEEEEEEE
Confidence 57999999999999999999999996 8888862 457899999999999999999999754 55799999999
Q ss_pred cCCCcc
Q 003009 349 SRPGGA 354 (858)
Q Consensus 349 s~~~~~ 354 (858)
++++..
T Consensus 82 A~p~~~ 87 (96)
T d2disa1 82 AEPEID 87 (96)
T ss_dssp SCSSCS
T ss_pred cCCCCC
Confidence 988654
No 128
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=6.7e-14 Score=121.85 Aligned_cols=74 Identities=9% Similarity=0.166 Sum_probs=67.6
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~ 350 (858)
..++|||+|||.++|+++|+++|+.||.|..|++ ++.++|||||+|.+.++|++||+ ++|..+.|+.|+|++++
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~~ 82 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFKD 82 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEGG
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEcC
Confidence 4568999999999999999999999999999987 35578999999999999999996 79999999999999853
No 129
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44 E-value=3.8e-14 Score=120.71 Aligned_cols=70 Identities=23% Similarity=0.453 Sum_probs=64.1
Q ss_pred ceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 003009 279 TLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (858)
Q Consensus 279 tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s 349 (858)
+|||+|||+++|+++|+++|++||.|.+|++ ++.++|||||+|.+.++|++||+ +++..+.|+.|+|+.|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 4899999999999999999999999999986 46689999999999999999997 4778999999999864
No 130
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.43 E-value=3.7e-13 Score=121.37 Aligned_cols=81 Identities=15% Similarity=0.231 Sum_probs=71.7
Q ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhc--CCccccccccccccC
Q 003009 188 GEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ--NKPLRRRKLDIHFSI 265 (858)
Q Consensus 188 ~~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Ln--g~~l~gr~L~V~~a~ 265 (858)
...++++|||+|||.++++++|+++|++||.|..+++ .+.+|+|||+|.+.++|++|+..|+ +..+.|++|+|+|+.
T Consensus 11 ~~~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~-~~~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s~ 89 (104)
T d1wexa_ 11 KVSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMM-MPFKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYST 89 (104)
T ss_dssp CCCCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEE-ETTTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEECS
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEE-EecceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEcC
Confidence 3457899999999999999999999999999999976 4678999999999999999999885 456789999999997
Q ss_pred CCCC
Q 003009 266 PKDN 269 (858)
Q Consensus 266 pk~~ 269 (858)
.+..
T Consensus 90 ~~~~ 93 (104)
T d1wexa_ 90 SKRI 93 (104)
T ss_dssp SSSC
T ss_pred CCcc
Confidence 6543
No 131
>d2msta_ d.58.7.1 (A:) Neural RNA-binding protein Musashi-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.43 E-value=5.7e-14 Score=118.74 Aligned_cols=70 Identities=16% Similarity=0.401 Sum_probs=65.1
Q ss_pred EEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 194 TLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 194 tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
+|||+|||.++|+++|+++|++||.|..+.+ +++++|||||+|.+.++|++|++ +++..|.|++|+|++|
T Consensus 1 rlfV~nLp~~~te~~l~~~F~~~G~i~~~~~~~~~~~~~~~~~afV~F~~~~~a~~al~-~~~~~l~gr~i~V~~A 75 (75)
T d2msta_ 1 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE-IHFHEINNKMVECKKA 75 (75)
T ss_dssp CEEEECCCSSCCHHHHHHHHHTTSCCSEECCBCCTTCTTSCCEEEEECSCHHHHHHHHH-CSSCCBTTBCCEEEEC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHhCCcceeeeeeeccccccCceeEEEECCHHHHHHHHh-cCCCEECCeEEEEEEC
Confidence 4899999999999999999999999998873 56789999999999999999997 9999999999999875
No 132
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.43 E-value=6.3e-14 Score=125.40 Aligned_cols=76 Identities=21% Similarity=0.186 Sum_probs=70.1
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCCCc
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~~~ 353 (858)
...+|||+|||.++++++|+++|++||+|+.+++. ++|||||+|.+.++|++||+.|||..+.|+.|+|.+.+...
T Consensus 14 ~~~~i~V~Nlp~~~~~~~L~~~F~~~G~v~~~~i~--~~g~afV~f~~~~~a~~Ai~~lng~~~~g~~i~v~~~~~~~ 89 (98)
T d1wg4a_ 14 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQ--KDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYP 89 (98)
T ss_dssp CSCEEEEECCCSSCCHHHHHHHHTTSSCEEEEEEE--TTTEEEEEESSHHHHHHHHHHHSSEEEECTTSCEEEEEEEC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhhccccccccc--ccceEEEEECCHHHHHHHHHHhCCCEeCCeEEEEEEEecCC
Confidence 34579999999999999999999999999999985 46899999999999999999999999999999999986554
No 133
>d1wi8a_ d.58.7.1 (A:) Eukaryotic translation initiation factor 4B {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=2.1e-13 Score=122.80 Aligned_cols=77 Identities=23% Similarity=0.364 Sum_probs=67.3
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe------CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE------TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri------t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s 349 (858)
+..+|||+|||+++|+++|+++|+.|| |+++++ ++.++|||||+|.+.++|++|+ .||+..|.|+.|+|+++
T Consensus 14 p~~~v~V~nLp~~~te~~l~~~f~~~g-~~~~~~~~~~~~~g~~~g~afV~f~~~e~a~~~~-~~~~~~~~gr~l~V~~a 91 (104)
T d1wi8a_ 14 PPYTAFLGNLPYDVTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSAL-SLNEESLGNKRIRVDVA 91 (104)
T ss_dssp SCEEEEEESCCSSCCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHH-GGGTCEETTEECEEEEC
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHhc-cccceeeeeeccCCCcceeeeEEECCHHHHHHHH-HcCCCEECCEEEEEEEC
Confidence 347899999999999999999999999 667654 3457889999999999998776 59999999999999999
Q ss_pred CCCcc
Q 003009 350 RPGGA 354 (858)
Q Consensus 350 ~~~~~ 354 (858)
.++..
T Consensus 92 ~~~~~ 96 (104)
T d1wi8a_ 92 DQAQD 96 (104)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 87653
No 134
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.43 E-value=1.4e-13 Score=117.12 Aligned_cols=71 Identities=20% Similarity=0.207 Sum_probs=64.2
Q ss_pred cceeeeCCCCCCchhHHHHhhcccCceEEEEeC---CCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 003009 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRET---PHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (858)
Q Consensus 278 ~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit---~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s 349 (858)
.+|||+|||+++++++|+++|+.||.|+.|++. ...++||||+|++.++|++|+. ||++.|+|++|.|+.+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccccceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 379999999999999999999999999999873 3356799999999999999985 8999999999999764
No 135
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=2.1e-13 Score=119.22 Aligned_cols=79 Identities=15% Similarity=0.173 Sum_probs=70.7
Q ss_pred CCCccceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHh--CCCccCCceEEEEecCC
Q 003009 274 DLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSL--NRSDIAGKRIKLEPSRP 351 (858)
Q Consensus 274 ~~~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~L--nG~~i~Gr~I~V~~s~~ 351 (858)
..+.++|||+|||.++++++|+++|++||.|.++++.. .+++|||+|.+.++|++|++.+ ++..+.|++|+|.|++.
T Consensus 5 ~~Ps~~l~V~nLp~~~t~~~L~~~f~~~G~i~~v~~~~-~~~~afV~f~~~e~A~~a~~~~~~~~~~~~g~~l~v~~sk~ 83 (88)
T d2cq1a1 5 GAPSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLK-GKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNH 83 (88)
T ss_dssp SSCCSEEEEESCCTTCCHHHHHHTTTTTSCEEEEEEET-TTTEEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEECSC
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHhcccccccccccc-cceEEEEEeCCHHHHHHHHHHHccCCCccCCCEEEEEECCC
Confidence 34567999999999999999999999999999999864 4689999999999999999976 56789999999999986
Q ss_pred Cc
Q 003009 352 GG 353 (858)
Q Consensus 352 ~~ 353 (858)
+.
T Consensus 84 ~~ 85 (88)
T d2cq1a1 84 KE 85 (88)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 136
>d1x0fa1 d.58.7.1 (A:183-257) Nuclear ribonucleoprotein D0 (AUF1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=7e-14 Score=119.06 Aligned_cols=70 Identities=19% Similarity=0.469 Sum_probs=64.4
Q ss_pred EEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 194 TLFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 194 tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
+|||+|||+++|+++|+++|++||+|..|++ +++++|||||+|.+.++|++|++ .++..|.|+.|.|+.|
T Consensus 1 klfVgnLp~~~te~~l~~~F~~~G~I~~v~i~~d~~t~~~rG~~FV~f~~~~~a~~al~-~~~~~i~g~~i~vk~A 75 (75)
T d1x0fa1 1 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME-KKYHNVGLSKCEIKVA 75 (75)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHSCEEEEECCCCTTTCCTTCCEEEEESSSHHHHHHTT-CSSCCBTTBCCEEECC
T ss_pred CEEEcCCCCCCCHHHHHHHHHHhCCcccccccccccccccccEEEEEECCHHHHHHHHh-hCCCEECCEEeEEEEC
Confidence 5999999999999999999999999999984 57899999999999999999997 5778899999998764
No 137
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=4.6e-14 Score=118.62 Aligned_cols=66 Identities=24% Similarity=0.439 Sum_probs=61.5
Q ss_pred eeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEE
Q 003009 280 LVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIK 345 (858)
Q Consensus 280 LfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~ 345 (858)
|||+|||.++|+++|+++|++||.|..+++ ++.++|+|||+|.+.++|++|++.|||+.+.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 799999999999999999999999999975 456789999999999999999999999999998764
No 138
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=1.6e-13 Score=119.49 Aligned_cols=73 Identities=12% Similarity=0.348 Sum_probs=67.7
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe----CCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 191 ~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
..++|||+|||.++|+++|+++|+.||.|..|++ +++++|||||+|.+.++|++|++ +++..+.|++|.|+|.
T Consensus 5 ~~rtvfV~nlp~~~te~~l~~~F~~~G~v~~v~l~~~~~~~~kG~afV~f~~~e~a~~al~-~~~~~~~g~~l~v~~~ 81 (85)
T d1zh5a2 5 KNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE-TPGQKYKETDLLILFK 81 (85)
T ss_dssp HTTEEEEECCCTTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHT-CCCCEETTEECEEEEG
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHhcccccceeeeeccCCcceEEEEEEcCHHHHHHHHH-HCCCEECCEEEEEEEc
Confidence 3589999999999999999999999999999985 56788999999999999999996 7999999999999985
No 139
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=1.2e-13 Score=115.98 Aligned_cols=66 Identities=23% Similarity=0.437 Sum_probs=62.1
Q ss_pred EEEeCCCCCCCHHHHHHHhhcCCCEEEEEe-----CCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccc
Q 003009 195 LFVRNINSNVEDSELRALFEQYGDIRTLYT-----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLD 260 (858)
Q Consensus 195 LfV~NLP~~vteeeLr~lFs~fG~I~sv~~-----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~ 260 (858)
|||+|||.++|+++|+++|++||.|..+++ +++++|||||+|.+.++|++|+..|+|..|.|+.|+
T Consensus 1 lyV~nLp~~~te~~l~~~F~~~G~v~~~~~~~~~~~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~Gr~~k 71 (72)
T d1x4ea1 1 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTALKASGVQAQMAK 71 (72)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHHHHHHTCCEESCC
T ss_pred CEEeCCCCcCCHHHHHHHHhhhccccccccccccccccccceeEEEECCHHHHHHHHHHhCCCEECCEECc
Confidence 799999999999999999999999999873 567999999999999999999999999999999875
No 140
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.39 E-value=6.3e-13 Score=119.84 Aligned_cols=78 Identities=19% Similarity=0.222 Sum_probs=70.1
Q ss_pred CCccceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHh--CCCccCCceEEEEecCCC
Q 003009 275 LNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSL--NRSDIAGKRIKLEPSRPG 352 (858)
Q Consensus 275 ~~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~L--nG~~i~Gr~I~V~~s~~~ 352 (858)
....+|||+|||.++|+++|+++|++||.|++|++.. .+++|||+|++.++|++|++.| ++..+.|++|+|.|++.+
T Consensus 13 ~ps~~l~v~nlp~~~te~~l~~~F~~fG~I~~~~~~~-~k~~AfV~f~~~e~A~~ai~~~~~~~~~~~g~~l~v~~s~~~ 91 (104)
T d1wexa_ 13 SVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMP-FKRQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYSTSK 91 (104)
T ss_dssp CCCSEEEEESCCSSCCHHHHHHHHTTTSCEEEEEEET-TTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCEEEECSSS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHhhhhcccceEEEEEe-cceeEEEEeCCHHHHHHHHHHHcCCCcEEeeEEEEEEEcCCC
Confidence 3467899999999999999999999999999999864 5789999999999999999988 456788999999999765
Q ss_pred c
Q 003009 353 G 353 (858)
Q Consensus 353 ~ 353 (858)
.
T Consensus 92 ~ 92 (104)
T d1wexa_ 92 R 92 (104)
T ss_dssp S
T ss_pred c
Confidence 4
No 141
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.39 E-value=3.5e-13 Score=120.64 Aligned_cols=77 Identities=19% Similarity=0.186 Sum_probs=68.8
Q ss_pred CccceeeeCCCCC-CchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHH--HhCCCccCCceEEEEecCCC
Q 003009 276 NQGTLVVFNLDPS-VSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALK--SLNRSDIAGKRIKLEPSRPG 352 (858)
Q Consensus 276 ~~~tLfV~NLp~~-vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~--~LnG~~i~Gr~I~V~~s~~~ 352 (858)
..++|||+|||.+ +|+++|+++|++||.|.++++.. .+|+|||+|.+.++|.+|++ .+++..+.|++|+|.+++.+
T Consensus 17 ~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~~~-~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~s~~~ 95 (99)
T d1x4fa1 17 LGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYILMR-MKSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSEKY 95 (99)
T ss_dssp CCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEEET-TTTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEEECSC
T ss_pred CCCEEEEeCCcCCccCHHHHHhhhccccceeEEEEee-cCCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEEEcCCc
Confidence 4568999999975 89999999999999999999864 47999999999999999998 57788999999999999765
Q ss_pred c
Q 003009 353 G 353 (858)
Q Consensus 353 ~ 353 (858)
.
T Consensus 96 ~ 96 (99)
T d1x4fa1 96 K 96 (99)
T ss_dssp S
T ss_pred c
Confidence 3
No 142
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.38 E-value=2e-13 Score=118.67 Aligned_cols=74 Identities=22% Similarity=0.260 Sum_probs=65.9
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEE-E----eCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEI-R----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~i-r----it~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s 349 (858)
...+|||+|||++++++||+++|+.||.|... . .++.++|+|||+|.+.++|++|++.|||..+.|++|+|+++
T Consensus 8 ~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 8 GPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp SSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 34579999999999999999999999987542 2 25677999999999999999999999999999999999874
No 143
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.38 E-value=2.4e-13 Score=123.00 Aligned_cols=79 Identities=16% Similarity=0.197 Sum_probs=69.7
Q ss_pred CccceeeeCCCCCCch-----hHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 003009 276 NQGTLVVFNLDPSVSN-----EDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTe-----edL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~ 350 (858)
...+|||+||+.++.. ++|+++|++||.|+++++. ++++||||+|.+.++|.+|++.|||..|.|++|+|.|++
T Consensus 4 ~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~~-k~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v~~a~ 82 (104)
T d1weya_ 4 GSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQYF-KSFKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFAQ 82 (104)
T ss_dssp CCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEEE-TTTTEEEEECSSTTHHHHHHHTSTTSEETTEECEEECCC
T ss_pred CCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEEe-cCCCEEEEEECCHHHHHHHHHHhcccccCCCEeEEeecc
Confidence 3468999999998733 5699999999999999986 467899999999999999999999999999999999998
Q ss_pred CCccc
Q 003009 351 PGGAR 355 (858)
Q Consensus 351 ~~~~r 355 (858)
+....
T Consensus 83 ~~~~~ 87 (104)
T d1weya_ 83 TLHIG 87 (104)
T ss_dssp CSSCC
T ss_pred cCCCC
Confidence 76543
No 144
>d2ghpa2 d.58.7.1 (A:41-115) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.37 E-value=4.7e-13 Score=113.73 Aligned_cols=71 Identities=17% Similarity=0.254 Sum_probs=64.2
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe---CCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLYT---ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 193 ~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~---~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
++|||+|||+++++++|+++|+.||+|..+++ ....++||||+|.+.++|++|+. ++++.|.|++|.|+.+
T Consensus 1 Ttv~V~nlp~~~t~~~l~~~F~~~G~I~~v~~~~~~~~~~~~afV~F~~~~~a~~Al~-~~~~~i~g~~i~V~~~ 74 (75)
T d2ghpa2 1 TTVLVKNLPKSYNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAIT-KTHKVVGQNEIIVSHL 74 (75)
T ss_dssp CEEEEEEECTTCCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHHT-TTTCEETTEECEEEEC
T ss_pred CEEEEECCCCCCCHHHHHHHHhcCCceEEEEEEeeccccceEEEEEEcchHHhHHHHH-hcCcEECCEEEEEEEC
Confidence 58999999999999999999999999999885 34456899999999999999985 8999999999998754
No 145
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.36 E-value=2.1e-13 Score=118.51 Aligned_cols=75 Identities=20% Similarity=0.267 Sum_probs=66.7
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEE-E----eCCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTL-Y----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv-~----~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
...++|||+|||+++++++|+++|+.||.|... . .+++++|||||+|.+.++|++|++.|++..|.|++|+|.++
T Consensus 7 p~~~~l~v~nLp~~~~~~di~~~F~~~~~~~~~~~~~~~~~g~~~G~afV~f~~~e~a~~Ai~~l~~~~l~gr~i~v~l~ 86 (86)
T d2cqpa1 7 PGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG 86 (86)
T ss_dssp CSSEEEEEESCCTTCCHHHHHHHTTTSCCCTTTCEEEECSSSCEEEEEEEEESCHHHHHHHHHHTTTCEETTEECEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHhhcccceeEEEEEeCCCCCcceEEEEEEcCcHHHHHHHHHcCCCEECCEEEEEEEC
Confidence 345789999999999999999999999987432 2 36788999999999999999999999999999999999864
No 146
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=4.8e-13 Score=120.24 Aligned_cols=77 Identities=13% Similarity=0.195 Sum_probs=67.1
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~ 351 (858)
...+|||+|||+++|++||+++|+.||.+ .|++ .+..+|||||+|.+.++|++|++ ||++.|.||.|+|.++.+
T Consensus 14 ~~~~v~v~nLp~~~te~dl~~~F~~~~~~-~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~s~~ 91 (102)
T d1weza_ 14 TGHCVHMRGLPYRATENDIYNFFSPLNPM-RVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFLNST 91 (102)
T ss_dssp SSCEEEEESCCTTCCHHHHHHSSCSCCCS-EEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEEECC
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHhccCcc-eeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEEcCC
Confidence 34689999999999999999999999844 4543 45678999999999999999986 899999999999999887
Q ss_pred Ccc
Q 003009 352 GGA 354 (858)
Q Consensus 352 ~~~ 354 (858)
...
T Consensus 92 ~~~ 94 (102)
T d1weza_ 92 AGT 94 (102)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 147
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.36 E-value=7.2e-13 Score=116.31 Aligned_cols=79 Identities=14% Similarity=0.142 Sum_probs=69.9
Q ss_pred CCCCCcEEEEeCCCCC-CCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHh--cCCcccccccccccc
Q 003009 188 GEHPSRTLFVRNINSN-VEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRAL--QNKPLRRRKLDIHFS 264 (858)
Q Consensus 188 ~~~~s~tLfV~NLP~~-vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~L--ng~~l~gr~L~V~~a 264 (858)
...++++|||+|||.. +|++||+++|++||+|..+.+. +.+++|||+|.+.++|..|++.| ++..+.|++|+|.|+
T Consensus 4 ~~~~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~-~~k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~s 82 (89)
T d1x4da1 4 RVETRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLIL-NKINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLS 82 (89)
T ss_dssp CCCCCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEEC-SSSSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEE
T ss_pred CCCCCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEee-ccceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEEEEC
Confidence 3467899999999986 8999999999999999999864 56789999999999999999977 466789999999999
Q ss_pred CCC
Q 003009 265 IPK 267 (858)
Q Consensus 265 ~pk 267 (858)
...
T Consensus 83 ~~~ 85 (89)
T d1x4da1 83 QKY 85 (89)
T ss_dssp CCC
T ss_pred CCc
Confidence 643
No 148
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=1e-12 Score=118.35 Aligned_cols=77 Identities=23% Similarity=0.267 Sum_probs=68.5
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEe-----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE-----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri-----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~ 350 (858)
+..+|||+|||+++|++||+++|..||.|..+.+ ++.++|||||+|.++++|++|++ +|+..|.||.|+|.++.
T Consensus 14 ~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~~~ 92 (104)
T d1wg5a_ 14 NDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFKSS 92 (104)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEEEC
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEECC
Confidence 4568999999999999999999999998877532 45678999999999999999996 89999999999999987
Q ss_pred CCc
Q 003009 351 PGG 353 (858)
Q Consensus 351 ~~~ 353 (858)
+..
T Consensus 93 ~~~ 95 (104)
T d1wg5a_ 93 RAE 95 (104)
T ss_dssp TTT
T ss_pred HHH
Confidence 764
No 149
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.35 E-value=5.4e-13 Score=119.37 Aligned_cols=79 Identities=16% Similarity=0.212 Sum_probs=69.8
Q ss_pred CCCCcEEEEeCCCCC-CCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHH--HhcCCccccccccccccC
Q 003009 189 EHPSRTLFVRNINSN-VEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMR--ALQNKPLRRRKLDIHFSI 265 (858)
Q Consensus 189 ~~~s~tLfV~NLP~~-vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~--~Lng~~l~gr~L~V~~a~ 265 (858)
..++++|||+|||.+ +|+++|+++|++||.|..+++ .+.+|||||+|.+.++|.+|++ .+++..+.|++|+|.|+.
T Consensus 15 ~~~~~~l~v~nLp~~~~te~~l~~~F~~fG~V~~v~~-~~~k~~afV~f~~~~~A~~Ai~~~~~~~~~~~gr~l~V~~s~ 93 (99)
T d1x4fa1 15 QELGRVIHLSNLPHSGYSDSAVLKLAEPYGKIKNYIL-MRMKSQAFIEMETREDAMAMVDHCLKKALWFQGRCVKVDLSE 93 (99)
T ss_dssp SCCCCEEEEESCCCSSCCSHHHHTTTTTTSCCSEEEE-ETTTTEEEEECSSHHHHHHHHHHHHHSCCCSSSSCCEEEEEC
T ss_pred CCCCCEEEEeCCcCCccCHHHHHhhhccccceeEEEE-eecCCcEEEEecchHHHHHHHHHHhcCCceECCEEEEEEEcC
Confidence 456789999999985 899999999999999999976 4578999999999999999998 467888999999999996
Q ss_pred CCC
Q 003009 266 PKD 268 (858)
Q Consensus 266 pk~ 268 (858)
.+.
T Consensus 94 ~~~ 96 (99)
T d1x4fa1 94 KYK 96 (99)
T ss_dssp SCS
T ss_pred Ccc
Confidence 543
No 150
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.35 E-value=1.1e-12 Score=115.09 Aligned_cols=76 Identities=17% Similarity=0.232 Sum_probs=68.3
Q ss_pred CccceeeeCCCCC-CchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHh--CCCccCCceEEEEecCCC
Q 003009 276 NQGTLVVFNLDPS-VSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSL--NRSDIAGKRIKLEPSRPG 352 (858)
Q Consensus 276 ~~~tLfV~NLp~~-vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~L--nG~~i~Gr~I~V~~s~~~ 352 (858)
...+|||+|||.. +|++||+++|++||.|.+|++.. .+++|||+|++.++|.+|++.| ++..+.|++|+|.|+++.
T Consensus 7 ~sr~v~v~nl~~~~~t~~eL~~lF~~fG~I~~i~i~~-~k~~afV~f~~~~~A~~A~~~l~~~~~~~~gr~l~V~~s~~~ 85 (89)
T d1x4da1 7 TRRVVHIMDFQRGKNLRYQLLQLVEPFGVISNHLILN-KINEAFIEMATTEDAQAAVDYYTTTPALVFGKPVRVHLSQKY 85 (89)
T ss_dssp CCCEEEEESCCCSSSHHHHHHTTTGGGSCEEEEEECS-SSSCEEEEESSHHHHHHHHHHHHHSCCEETTEECEEEEECCC
T ss_pred CCcEEEEECCCCCcCCHHHHHHHHHhhCCeEEEEeec-cceEEEEEEcchhhHHHHHHHHhhCCCccCCceEEEEECCCc
Confidence 4568999999986 89999999999999999999964 4689999999999999999976 577899999999999754
No 151
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.35 E-value=1.5e-12 Score=117.17 Aligned_cols=79 Identities=11% Similarity=0.162 Sum_probs=69.9
Q ss_pred CCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcccEEEEEEcCHHHHHHHHHHhcCCccccccccccc
Q 003009 189 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHF 263 (858)
Q Consensus 189 ~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~-----~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~ 263 (858)
.....+|||+|||+++|+++|+++|..+|.|..+. .+++++|||||+|.+.++|++|++ +++..|.+|.|+|.+
T Consensus 12 ~~~~~~v~v~nLP~~~te~dI~~~F~~~g~v~~~v~~~~~~~~~~kG~afV~F~~~e~a~~a~~-~~~~~i~gR~i~V~~ 90 (104)
T d1wg5a_ 12 TANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALK-KHKERIGHRYIEIFK 90 (104)
T ss_dssp CSCCCEEEEESCCTTCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHT-TTTCCSSSSCCEEEE
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEEEeCCCCCcceEEEEEeCCHHHHHHHHh-hCCCEEcceEEEEEE
Confidence 34556899999999999999999999999987754 266789999999999999999996 899999999999999
Q ss_pred cCCCC
Q 003009 264 SIPKD 268 (858)
Q Consensus 264 a~pk~ 268 (858)
+.+++
T Consensus 91 ~~~~~ 95 (104)
T d1wg5a_ 91 SSRAE 95 (104)
T ss_dssp ECTTT
T ss_pred CCHHH
Confidence 87654
No 152
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.35 E-value=2.8e-13 Score=118.88 Aligned_cols=72 Identities=18% Similarity=0.319 Sum_probs=63.8
Q ss_pred CCcEEEEeCCCCCCCHHHH---HHHhhcCCCEEEEEe-----C---CCcccEEEEEEcCHHHHHHHHHHhcCCccccccc
Q 003009 191 PSRTLFVRNINSNVEDSEL---RALFEQYGDIRTLYT-----A---CKHRGFVMISYYDIRAARTAMRALQNKPLRRRKL 259 (858)
Q Consensus 191 ~s~tLfV~NLP~~vteeeL---r~lFs~fG~I~sv~~-----~---~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L 259 (858)
..++|||+|||+++++++| +++|++||+|..|.+ + ...+|||||+|.+.++|++|++.|+|..+.|++|
T Consensus 7 q~n~vyV~nLp~~~t~~~l~~~~e~F~~~G~I~~v~i~~~~~~~~~~~~~g~aFV~f~~~~~A~~Ai~~lng~~~~gr~l 86 (89)
T d2cpia1 7 QKNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGRTL 86 (89)
T ss_dssp CSSCEEEEEECTTTCCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTEEE
T ss_pred ecCEEEEECCCCccCHHHHHHHHHHhcccCCceEEEEeeccCcCCCCCcceEEEEecccchhHHHHHHHhCCCEECCEEE
Confidence 3578999999999999999 678999999999985 1 2245899999999999999999999999999999
Q ss_pred ccc
Q 003009 260 DIH 262 (858)
Q Consensus 260 ~V~ 262 (858)
+|.
T Consensus 87 kvS 89 (89)
T d2cpia1 87 KAS 89 (89)
T ss_dssp EEE
T ss_pred EEC
Confidence 873
No 153
>d1weza_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=1.1e-12 Score=117.85 Aligned_cols=80 Identities=10% Similarity=0.217 Sum_probs=68.8
Q ss_pred CCCCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE---eCCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 188 GEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY---TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 188 ~~~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~---~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
......+|||+|||+++|+++|+++|+.||.+.... ..++.+|||||+|.+.++|++|++ +++..|.||.|+|.++
T Consensus 11 ~~~~~~~v~v~nLp~~~te~dl~~~F~~~~~~~v~~~~~~~g~~~G~afVeF~~~~~a~~Al~-~~~~~i~gR~I~V~~s 89 (102)
T d1weza_ 11 QSTTGHCVHMRGLPYRATENDIYNFFSPLNPMRVHIEIGPDGRVTGEADVEFATHEDAVAAMA-KDKANMQHRYVELFLN 89 (102)
T ss_dssp CCSSSCEEEEESCCTTCCHHHHHHSSCSCCCSEEEEEESSSSCEEEEEEEECSSSHHHHHHHT-TSSCCSSSSCCEEEEE
T ss_pred cCCCCCEEEEeCCCCcCCHHHHHHHHhccCcceeeeEEecCCcceEEEEEEECCHHHHHHHHH-cCCCEECCEEEEEEEc
Confidence 345567999999999999999999999998653222 267789999999999999999986 8999999999999998
Q ss_pred CCCC
Q 003009 265 IPKD 268 (858)
Q Consensus 265 ~pk~ 268 (858)
.++.
T Consensus 90 ~~~~ 93 (102)
T d1weza_ 90 STAG 93 (102)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7654
No 154
>d1weya_ d.58.7.1 (A:) Calcipressin-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.30 E-value=6.4e-13 Score=120.11 Aligned_cols=79 Identities=19% Similarity=0.217 Sum_probs=70.3
Q ss_pred CCCcEEEEeCCCCCC-CH----HHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 190 HPSRTLFVRNINSNV-ED----SELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 190 ~~s~tLfV~NLP~~v-te----eeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
....+|||+||+.++ ++ ++|+++|++||+|.++++ .++++||||+|.+.++|++|+..|+|..|.|++|+|.|+
T Consensus 3 ~~~~~L~v~nl~~~v~~~d~~k~~l~~lF~~~G~i~~~~~-~k~~~~afV~f~~~~~A~~Ai~~lng~~~~g~~l~v~~a 81 (104)
T d1weya_ 3 SGSSGLIACVANDDVFSESETRAKFESLFRTYDKDTTFQY-FKSFKRVRINFSNPLSAADARLRLHKTEFLGKEMKLYFA 81 (104)
T ss_dssp SCCCEEEEECCCGGGGSTTTHHHHHHHHHHTTCSSCEEEE-ETTTTEEEEECSSTTHHHHHHHTSTTSEETTEECEEECC
T ss_pred CCCceEEEEeCCchhcCcHHHHHHHHHHhcccccceEEEE-ecCCCEEEEEECCHHHHHHHHHHhcccccCCCEeEEeec
Confidence 356899999999986 33 569999999999999975 468999999999999999999999999999999999999
Q ss_pred CCCCC
Q 003009 265 IPKDN 269 (858)
Q Consensus 265 ~pk~~ 269 (858)
.++..
T Consensus 82 ~~~~~ 86 (104)
T d1weya_ 82 QTLHI 86 (104)
T ss_dssp CCSSC
T ss_pred ccCCC
Confidence 77653
No 155
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27 E-value=1.6e-12 Score=116.81 Aligned_cols=74 Identities=12% Similarity=0.165 Sum_probs=65.8
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEE-EEe----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKE-IRE----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~-iri----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~ 351 (858)
..+|||+|||+++|+++|+++|+.||.|.. +.+ ++.++|+|||+|.+.++|++||+ |||..|.|+.|.|.++..
T Consensus 8 ~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~~~ 86 (103)
T d2cpya1 8 KVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVVTL 86 (103)
T ss_dssp CCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEECH
T ss_pred ceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEECCH
Confidence 457999999999999999999999998865 333 46679999999999999999996 999999999999998754
No 156
>d2cpya1 d.58.7.1 (A:536-638) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=1.8e-12 Score=116.35 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=66.6
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEE-E----eCCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTL-Y----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv-~----~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
...++|||+|||+++|+++|+++|+.||.|..+ . ..++++|||||+|.+.++|++|+. |++..|.|++|.|.++
T Consensus 6 ~~~~~v~v~nLp~~~t~~~l~~~F~~~g~i~~~~~~~~~~~g~~~G~afV~F~s~~~a~~Al~-~n~~~i~gr~i~V~~~ 84 (103)
T d2cpya1 6 SAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSER-LHRKKLNGREAFVHVV 84 (103)
T ss_dssp SCCCEEEEESCCTTSCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGG-GCSEEETTEEEEEEEE
T ss_pred CCceEEEEeCCCCCCCHHHHhhhhcccceEEEEEEEEeCCCCCcCccEEEEECCHHHHHHHHh-cCCCeECCcEEEEEEC
Confidence 446789999999999999999999999987542 2 267889999999999999999996 8999999999999886
Q ss_pred C
Q 003009 265 I 265 (858)
Q Consensus 265 ~ 265 (858)
.
T Consensus 85 ~ 85 (103)
T d2cpya1 85 T 85 (103)
T ss_dssp C
T ss_pred C
Confidence 4
No 157
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=2.9e-13 Score=118.73 Aligned_cols=72 Identities=17% Similarity=0.317 Sum_probs=63.9
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE----------eCCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccc
Q 003009 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLY----------TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIH 262 (858)
Q Consensus 193 ~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~----------~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~ 262 (858)
|+|||+|||.++|+++|+++|++||.|..+. .+++++|||||+|.+.++|++|++ |+|..+.|++|+|+
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 7899999999999999999999999775543 145689999999999999999985 99999999999998
Q ss_pred ccC
Q 003009 263 FSI 265 (858)
Q Consensus 263 ~a~ 265 (858)
.+.
T Consensus 81 r~k 83 (90)
T d1u2fa_ 81 RPH 83 (90)
T ss_dssp CTT
T ss_pred CCC
Confidence 654
No 158
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=1.1e-12 Score=118.52 Aligned_cols=72 Identities=24% Similarity=0.272 Sum_probs=67.4
Q ss_pred cceeeeCCCCCCchhHHHHhhcccCceEEEEe----CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEec
Q 003009 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE----TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 349 (858)
Q Consensus 278 ~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri----t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s 349 (858)
..++|.++..++++++|+++|++||.|++|++ +++++|+|||+|.+.++|.+|++.|||+.++|++|+|+|+
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 46999999999999999999999999999987 3567899999999999999999999999999999999986
No 159
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.19 E-value=3.5e-13 Score=118.20 Aligned_cols=70 Identities=19% Similarity=0.329 Sum_probs=62.1
Q ss_pred cceeeeCCCCCCchhHHHHhhcccCceEEEEe----------CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEE
Q 003009 278 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRE----------TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLE 347 (858)
Q Consensus 278 ~tLfV~NLp~~vTeedL~~~Fs~fG~I~~iri----------t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~ 347 (858)
++|||+|||.++|+++|+++|+.||.|..+.+ +..++|||||+|.+.++|++|++ |||..+.|+.|+|+
T Consensus 2 RrlyVgNLp~~~te~~l~~~F~~~g~~~~~~~~~~~~~~~~~~~~~kg~afV~f~~~e~a~~a~~-l~g~~~~Gr~l~V~ 80 (90)
T d1u2fa_ 2 RRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMA-FDGIIFQGQSLKIR 80 (90)
T ss_dssp CEEEECSCCTTCCTTHHHHHHHHHHTTTTSCCSSSCSEEECCEETTTTEEEEEESSCTTTTTGGG-GSSCCSSSSCCCCB
T ss_pred CEEEEcCCCCccchHHHHHHHHhhCcEEEEEEeccceeeecccCCCceEEEEEeCCHHHHHHHHh-hCCcEECCEEEEEC
Confidence 47999999999999999999999998766543 24578999999999999999985 99999999999986
Q ss_pred e
Q 003009 348 P 348 (858)
Q Consensus 348 ~ 348 (858)
.
T Consensus 81 r 81 (90)
T d1u2fa_ 81 R 81 (90)
T ss_dssp C
T ss_pred C
Confidence 4
No 160
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18 E-value=5.5e-12 Score=115.14 Aligned_cols=76 Identities=17% Similarity=0.207 Sum_probs=66.6
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEE-----EeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecCC
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEI-----RETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 351 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~i-----rit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~~ 351 (858)
..+|||+|||+++|+++|+++|+.||.|..+ ...+.++|+|||+|.+.++|++|++ |||..|+|+.|.|..+.+
T Consensus 18 ~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~~~~ 96 (112)
T d1wela1 18 GFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHPITK 96 (112)
T ss_dssp CCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEEECH
T ss_pred CeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEEcCh
Confidence 4589999999999999999999999987543 1256789999999999999999996 999999999999998765
Q ss_pred Cc
Q 003009 352 GG 353 (858)
Q Consensus 352 ~~ 353 (858)
..
T Consensus 97 ~~ 98 (112)
T d1wela1 97 KG 98 (112)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 161
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.17 E-value=2.1e-11 Score=109.36 Aligned_cols=63 Identities=24% Similarity=0.372 Sum_probs=57.5
Q ss_pred CccceeeeC--CCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCcc
Q 003009 276 NQGTLVVFN--LDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDI 339 (858)
Q Consensus 276 ~~~tLfV~N--Lp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i 339 (858)
+..+|+|.| ||.++|+++|+++|++||.|++|++.. .++||||+|.+.++|.+|++.|||+.+
T Consensus 17 pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~~~-~k~~aFV~f~~~e~A~~A~~~lng~~i 81 (101)
T d2cq2a1 17 ATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLMPP-NKPYSFARYRTTEESKRAYVTLNGKEV 81 (101)
T ss_dssp CCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEECCT-TCSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred CCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEeecc-CccEEEEEECCHHHHHHHHHHhCCCCC
Confidence 346789966 999999999999999999999999865 578999999999999999999999987
No 162
>d1wela1 d.58.7.1 (A:412-523) RNA-binding protein 12 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.16 E-value=8e-12 Score=114.02 Aligned_cols=76 Identities=9% Similarity=0.183 Sum_probs=66.6
Q ss_pred CCCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-----eCCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 190 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLY-----TACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~-----~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
...++|||+|||+++|+++|+++|+.||.|..+. ..++++|||||+|.+.++|++|++ |++..|.|+.|+|..+
T Consensus 16 ~~~~~i~v~nLp~~~t~~di~~~F~~~g~~~~~~~~~~~~~g~~~G~afVeF~~~e~a~~al~-~~~~~i~gR~i~V~~~ 94 (112)
T d1wela1 16 EAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRNEADYKAALC-RHKQYMGNRFIQVHPI 94 (112)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHSCSSCBCTTTCEEEECTTSSEEEEEEEEBSSSHHHHHHHT-SCSBCSTTSCBEEEEE
T ss_pred CCCeEEEEecCCCcCcHHHHhhHHhhccccccceeeecCcccceeeEEEEEECCHHHHHHHHH-cCCCcCCCEEEEEEEc
Confidence 3567999999999999999999999999874321 368899999999999999999996 8999999999999876
Q ss_pred CC
Q 003009 265 IP 266 (858)
Q Consensus 265 ~p 266 (858)
.+
T Consensus 95 ~~ 96 (112)
T d1wela1 95 TK 96 (112)
T ss_dssp CH
T ss_pred Ch
Confidence 43
No 163
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=2.7e-11 Score=108.59 Aligned_cols=66 Identities=18% Similarity=0.329 Sum_probs=59.7
Q ss_pred CCCCcEEEEeC--CCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCccc
Q 003009 189 EHPSRTLFVRN--INSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLR 255 (858)
Q Consensus 189 ~~~s~tLfV~N--LP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~ 255 (858)
..++++|+|.| ||.++|+++|+++|++||.|..+++ .+.++||||+|.+.++|++|++.|+|..+.
T Consensus 15 ~~pt~~l~V~ng~L~~~vte~~L~~~F~~~G~i~~i~~-~~~k~~aFV~f~~~e~A~~A~~~lng~~i~ 82 (101)
T d2cq2a1 15 SYATQSLVVANGGLGNGVSRNQLLPVLEKCGLVDALLM-PPNKPYSFARYRTTEESKRAYVTLNGKEVV 82 (101)
T ss_dssp SSCCSEEEEETCTGGGTCCHHHHHHHHHHHSCEEEEEC-CTTCSCEEEEESSHHHHHHHHHHTTTCEEE
T ss_pred CCCCceEEEECCCCCCCCCHHHHHHHHHhhCcccEEee-ccCccEEEEEECCHHHHHHHHHHhCCCCCC
Confidence 45678999966 9999999999999999999999975 457899999999999999999999998873
No 164
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=2.8e-11 Score=110.61 Aligned_cols=76 Identities=21% Similarity=0.176 Sum_probs=66.3
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCH-HHHHHHHHHhCCCccCCceEEEEecCCCc
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDV-RAAEAALKSLNRSDIAGKRIKLEPSRPGG 353 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~-e~A~kAl~~LnG~~i~Gr~I~V~~s~~~~ 353 (858)
.-.+||+|||+++|+++|+++|++||.|.+|++.. .+|||||+|.+. ++|.+|+..|++..+.++.+.|.+.....
T Consensus 11 ~~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~~-~kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~~~~ 87 (113)
T d1owxa_ 11 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVR-GAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEVLEG 87 (113)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCT-TCSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEECCH
T ss_pred CeEEEECCCCCCCCHHHHHHHHHhcCChheEEEec-CCceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEeeccc
Confidence 34579999999999999999999999999999964 589999999985 78999999999999888777777765544
No 165
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.10 E-value=7.1e-11 Score=105.40 Aligned_cols=78 Identities=17% Similarity=0.290 Sum_probs=67.5
Q ss_pred CccceeeeCC--CCCC---------chhHHHHhhcccCceEEEEe-CCCCccEEEEEEcCHHHHHHHHHHhCCCccCCce
Q 003009 276 NQGTLVVFNL--DPSV---------SNEDLRQIFGAYGEVKEIRE-TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKR 343 (858)
Q Consensus 276 ~~~tLfV~NL--p~~v---------TeedL~~~Fs~fG~I~~iri-t~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~ 343 (858)
..++|+|.|| +.++ .++||++.|++||.|..|++ .++.+|++||+|.+.++|.+|++.|||+.++|++
T Consensus 7 ~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~~~G~~fV~f~~~e~A~~A~~~lng~~~~gr~ 86 (99)
T d2dita1 7 HERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFGGRQ 86 (99)
T ss_dssp SCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEETTEE
T ss_pred CccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCCCccEEEEEECCHHHHHHHHHHhCCcEECCEE
Confidence 4568999999 5433 23789999999999999987 4567899999999999999999999999999999
Q ss_pred EEEEecCCCc
Q 003009 344 IKLEPSRPGG 353 (858)
Q Consensus 344 I~V~~s~~~~ 353 (858)
|+|++..++.
T Consensus 87 i~v~~~~g~~ 96 (99)
T d2dita1 87 ITAQAWDGTT 96 (99)
T ss_dssp CEEEECCSCC
T ss_pred EEEEEeCCcC
Confidence 9999987653
No 166
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.09 E-value=6.1e-11 Score=105.85 Aligned_cols=82 Identities=18% Similarity=0.293 Sum_probs=70.9
Q ss_pred CCCCCCcEEEEeCC--CCCCC---------HHHHHHHhhcCCCEEEEEe-CCCcccEEEEEEcCHHHHHHHHHHhcCCcc
Q 003009 187 YGEHPSRTLFVRNI--NSNVE---------DSELRALFEQYGDIRTLYT-ACKHRGFVMISYYDIRAARTAMRALQNKPL 254 (858)
Q Consensus 187 ~~~~~s~tLfV~NL--P~~vt---------eeeLr~lFs~fG~I~sv~~-~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l 254 (858)
.....+++|+|+|+ |.++. +++|++.|++||.|..|++ ....+|+|||+|.+.++|.+|+..|+|..+
T Consensus 3 ~~~~~~r~v~l~nmf~~~~~~~~~~~~~~i~edv~~~~~~~G~V~~v~~~~~~~~G~~fV~f~~~e~A~~A~~~lng~~~ 82 (99)
T d2dita1 3 SRMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWF 82 (99)
T ss_dssp CCCCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEE
T ss_pred CCCCCccEEEEccCCCHHHhhcchHHHHHHHHHHHHHhcCcccEEEEeccCCCCccEEEEEECCHHHHHHHHHHhCCcEE
Confidence 44567899999999 65432 2689999999999999885 566789999999999999999999999999
Q ss_pred ccccccccccCCCC
Q 003009 255 RRRKLDIHFSIPKD 268 (858)
Q Consensus 255 ~gr~L~V~~a~pk~ 268 (858)
.|++|.|+|..++.
T Consensus 83 ~gr~i~v~~~~g~~ 96 (99)
T d2dita1 83 GGRQITAQAWDGTT 96 (99)
T ss_dssp TTEECEEEECCSCC
T ss_pred CCEEEEEEEeCCcC
Confidence 99999999987654
No 167
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.09 E-value=7.3e-11 Score=107.78 Aligned_cols=73 Identities=15% Similarity=0.243 Sum_probs=65.7
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCH-HHHHHHHHHhcCCccccccccccccCC
Q 003009 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDI-RAARTAMRALQNKPLRRRKLDIHFSIP 266 (858)
Q Consensus 193 ~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~-e~A~~Al~~Lng~~l~gr~L~V~~a~p 266 (858)
..+||+|||.++|+++|+++|++||+|..|++. +.+|||||.|.+. ++|..|+..|++..+.++.+.|.|+..
T Consensus 12 ~~~fvgnL~~~~tee~Lk~~F~~fG~V~~v~i~-~~kg~gfV~F~~~~~~A~~a~~~~~~~~l~~~~~~v~~~~~ 85 (113)
T d1owxa_ 12 LLKFSGDLDDQTCREDLHILFSNHGEIKWIDFV-RGAKEGIILFKEKAKEALGKAKDANNGNLQLRNKEVTWEVL 85 (113)
T ss_dssp EEEEEESCCSSCCHHHHHHHTCSSCCEEEEECC-TTCSEEEEEESSCHHHHHHHHHHTTTSCBCTTSSSEEEEEC
T ss_pred eEEEECCCCCCCCHHHHHHHHHhcCChheEEEe-cCCceEEEEecCcHHHHHHHHHHhcCCceecCceEEEEeec
Confidence 566999999999999999999999999999864 6799999999995 789999999999999988888887653
No 168
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.08 E-value=9.2e-11 Score=100.96 Aligned_cols=74 Identities=16% Similarity=0.198 Sum_probs=63.5
Q ss_pred CccceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCce-EEEEecCCC
Q 003009 276 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKR-IKLEPSRPG 352 (858)
Q Consensus 276 ~~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~-I~V~~s~~~ 352 (858)
+++.|+|+++|++.+++.| ++|++||.|.++++. ..++||||+|.++++|++||+ +||..+.|+. |.|+.+..+
T Consensus 3 ~~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~~-~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~~~k 77 (81)
T d1wwha1 3 DDTWVTVFGFPQASASYIL-LQFAQYGNILKHVMS-NTGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPCIDK 77 (81)
T ss_dssp GGGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEEC-SSSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEECCCH
T ss_pred cccEEEEECCChHHHHHHH-HHHHhhhhhheEEec-CCCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeCCCh
Confidence 4567999999999997655 579999999999984 567999999999999999996 9999999974 568887654
No 169
>d1jmta_ d.58.7.3 (A:) U2AF35 (35 KDa subunit) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.06 E-value=1e-11 Score=112.04 Aligned_cols=72 Identities=14% Similarity=0.225 Sum_probs=67.4
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEe----CCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccccccc
Q 003009 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLYT----ACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFS 264 (858)
Q Consensus 193 ~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~----~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a 264 (858)
+.++|++++.+++|++|+++|++||+|.+|++ +++++|||||+|.+.++|++|+..|+|+.+.|++|.|+|+
T Consensus 28 ~~~~v~~~~~~~~ed~l~e~f~k~G~I~~v~I~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lng~~~~gr~i~v~~s 103 (104)
T d1jmta_ 28 SDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELS 103 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEECCEEEC
T ss_pred chHHhhhhhhhhhHHHHHHHhccCCCEEEEEeecCCCCCEeeEEEEEEechhHHHHHHHHHCCCEECCEEEEEEEC
Confidence 46888999999999999999999999999985 5678999999999999999999999999999999999986
No 170
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.92 E-value=6.7e-10 Score=99.73 Aligned_cols=76 Identities=24% Similarity=0.332 Sum_probs=64.4
Q ss_pred CccceeeeCC--CCCC--------chhHHHHhhcccCceEEEEeCC-------CCccEEEEEEcCHHHHHHHHHHhCCCc
Q 003009 276 NQGTLVVFNL--DPSV--------SNEDLRQIFGAYGEVKEIRETP-------HKRHHKFIEFYDVRAAEAALKSLNRSD 338 (858)
Q Consensus 276 ~~~tLfV~NL--p~~v--------TeedL~~~Fs~fG~I~~irit~-------~srG~aFVeF~d~e~A~kAl~~LnG~~ 338 (858)
+.+.|+|.|| +..+ ..+||++.|++||.|++|.+.. ...|++||+|.+.++|.+|++.|||+.
T Consensus 3 Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr~ 82 (104)
T d1o0pa_ 3 PTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRK 82 (104)
T ss_dssp CCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCCE
Confidence 3567999998 4443 3467999999999999998732 245899999999999999999999999
Q ss_pred cCCceEEEEecCC
Q 003009 339 IAGKRIKLEPSRP 351 (858)
Q Consensus 339 i~Gr~I~V~~s~~ 351 (858)
++||.|.+.+...
T Consensus 83 f~gR~v~v~f~~~ 95 (104)
T d1o0pa_ 83 FANRVVVTKYCDP 95 (104)
T ss_dssp SSSSCCEEEEECH
T ss_pred ECCeEEEEEEcCH
Confidence 9999999999764
No 171
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.88 E-value=9.5e-10 Score=94.49 Aligned_cols=71 Identities=18% Similarity=0.213 Sum_probs=61.2
Q ss_pred CcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCcccccc-ccccccC
Q 003009 192 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRK-LDIHFSI 265 (858)
Q Consensus 192 s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~-L~V~~a~ 265 (858)
.+.|+|.++|++.+++.| +.|++||+|.++++ ++.+|||||+|.+.++|++|++ ++|..|.|+. |.|..+.
T Consensus 4 ~~wV~V~G~p~~~~~~il-~~F~~~G~I~~~~~-~~~~~~~fV~f~~~~~A~~Al~-~nG~~~~g~~~vgV~~~~ 75 (81)
T d1wwha1 4 DTWVTVFGFPQASASYIL-LQFAQYGNILKHVM-SNTGNWMHIRYQSKLQARKALS-KDGRIFGESIMIGVKPCI 75 (81)
T ss_dssp GGEEEEECCCGGGHHHHH-HHHHTTSCEEEEEE-CSSSSEEEEEESSHHHHHHHHT-TTTCEETTTEECEEEECC
T ss_pred ccEEEEECCChHHHHHHH-HHHHhhhhhheEEe-cCCCCEEEEEEcccHHHHHHHh-cCCCeECCcEEEEEEeCC
Confidence 477999999999997655 57999999999975 5678999999999999999996 9999999984 5677654
No 172
>d1o0pa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.79 E-value=2.8e-09 Score=95.63 Aligned_cols=76 Identities=16% Similarity=0.347 Sum_probs=65.2
Q ss_pred CCCcEEEEeCC--CCCCC--------HHHHHHHhhcCCCEEEEEeC-------CCcccEEEEEEcCHHHHHHHHHHhcCC
Q 003009 190 HPSRTLFVRNI--NSNVE--------DSELRALFEQYGDIRTLYTA-------CKHRGFVMISYYDIRAARTAMRALQNK 252 (858)
Q Consensus 190 ~~s~tLfV~NL--P~~vt--------eeeLr~lFs~fG~I~sv~~~-------~ksrG~aFV~F~d~e~A~~Al~~Lng~ 252 (858)
.|+++|.|+|+ |.++. .++|++.|++||.|.+|++. ....|++||+|.+.++|.+|+..|+|.
T Consensus 2 ~Ps~vl~l~N~~~~~~l~~~~~~~~i~edi~~e~~k~G~v~~v~I~~~~~~~~~~~~g~vfV~f~~~e~A~~A~~~l~Gr 81 (104)
T d1o0pa_ 2 HPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGR 81 (104)
T ss_dssp CCCSEEEEESSCCTTTTTSHHHHHHHHHHHHHHHTTTSCEEEEECCCCTTSSSCTTCCEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCCHHHcCCchhHHHHHHHHHHHhcccCceEEEEEeecCCCCccCCceEEEEEECCHHHHHHHHHHHCCC
Confidence 46899999999 55543 35689999999999999852 234589999999999999999999999
Q ss_pred ccccccccccccC
Q 003009 253 PLRRRKLDIHFSI 265 (858)
Q Consensus 253 ~l~gr~L~V~~a~ 265 (858)
.+.||+|.+.|..
T Consensus 82 ~f~gR~v~v~f~~ 94 (104)
T d1o0pa_ 82 KFANRVVVTKYCD 94 (104)
T ss_dssp CSSSSCCEEEEEC
T ss_pred EECCeEEEEEEcC
Confidence 9999999999974
No 173
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.72 E-value=1.4e-08 Score=88.44 Aligned_cols=84 Identities=21% Similarity=0.330 Sum_probs=72.2
Q ss_pred eeEEeecCCCCCCHHHHHHHHHhhCCCcceEE-Eeeecccccce-eEEEEEecCCcccHHHHHHHhcCCcccCCCC-ccE
Q 003009 695 TTLMIKNIPNKYTSKMLLAAIDENHKGTYDFL-YLPIDFKNKCN-VGYAFINMLSPLHIIPFYEAFNGKKWEKFNS-EKV 771 (858)
Q Consensus 695 TTvMirNIPnk~~~~~L~~~id~~~~~~yDf~-Ylp~df~~~~n-~gyaFin~~~~~~~~~f~~~f~g~~w~~~~s-~k~ 771 (858)
|.|.||++|..+|++.+++.|+ ..+++||+ |.|-|...+-+ -..|||||.+++++..|.+.|+|+.+..-+. +-.
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~--~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D~~g~~~~ 79 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQ--PMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYP 79 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHC--SCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEECTTCCEEE
T ss_pred ceEEEecCCCCCCHHHHHHHhC--CcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEcCCCCEee
Confidence 8999999999999999999998 47889999 57777775544 4789999999999999999999999987543 457
Q ss_pred EEEEeeecc
Q 003009 772 ASLAYARIQ 780 (858)
Q Consensus 772 ~~v~~A~iQ 780 (858)
+.|.||--|
T Consensus 80 a~VE~AP~q 88 (91)
T d1uw4a_ 80 AIVEFAPFQ 88 (91)
T ss_dssp CEEEECSSC
T ss_pred eEEEEcCcc
Confidence 889999776
No 174
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.84 E-value=0.00084 Score=54.55 Aligned_cols=60 Identities=25% Similarity=0.423 Sum_probs=53.6
Q ss_pred hhHHHHhhcccCceEEEEeCCCCcc--EEEEEEcCHHHHHHHHHHhCCCccCCceEEEEecC
Q 003009 291 NEDLRQIFGAYGEVKEIRETPHKRH--HKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 350 (858)
Q Consensus 291 eedL~~~Fs~fG~I~~irit~~srG--~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~V~~s~ 350 (858)
.+.|..+|.++|.|+++.+.+.+.+ .|-|...+..+|.-|+..|+...|++++|.|.++.
T Consensus 10 qq~L~~~f~~h~~V~sv~l~~~~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 10 QQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHHHhheeEEEEEEEeccCCcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 3556688999999999999777665 79999999999999999999999999999999864
No 175
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.59 E-value=0.0014 Score=55.78 Aligned_cols=72 Identities=22% Similarity=0.403 Sum_probs=57.9
Q ss_pred CCccceeeeCCCCCCc---------hhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCCCccCCceEE
Q 003009 275 LNQGTLVVFNLDPSVS---------NEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIK 345 (858)
Q Consensus 275 ~~~~tLfV~NLp~~vT---------eedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG~~i~Gr~I~ 345 (858)
..++|+.|.=...+.. -.+|.+.|..||+|+-||+.. +.-.|+|.+-+.|.+|++ |+|.++.|+.|+
T Consensus 13 PpDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~~~GeViLvRFv~---d~mwVTF~dG~SAL~al~-l~g~~v~G~~l~ 88 (95)
T d1ufwa_ 13 PLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRINQ---GQMLVTFADSHSALSVLD-VDGMKVKGRAVK 88 (95)
T ss_dssp CTTCEEEEEESSCCHHHHHSCCHHHHHHHHHHHHHHSCCSEEEEET---TEEEEECSCSHHHHHHHH-GGGSEETTEEEE
T ss_pred CCCcEEEEEeccCCccccccCCHHHHHHHHHHHhhCCeEEEEEEeC---CeEEEEECCcHHHHHHhc-cCCeEEcceEEE
Confidence 4567777754443332 256889999999999999864 568999999999999998 899999999999
Q ss_pred EEecC
Q 003009 346 LEPSR 350 (858)
Q Consensus 346 V~~s~ 350 (858)
|....
T Consensus 89 It~~~ 93 (95)
T d1ufwa_ 89 ISGPS 93 (95)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 97644
No 176
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.66 E-value=0.0092 Score=48.32 Aligned_cols=58 Identities=12% Similarity=0.219 Sum_probs=51.9
Q ss_pred HHHHHhhcCCCEEEEEeCCCccc--EEEEEEcCHHHHHHHHHHhcCCccccccccccccC
Q 003009 208 ELRALFEQYGDIRTLYTACKHRG--FVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSI 265 (858)
Q Consensus 208 eLr~lFs~fG~I~sv~~~~ksrG--~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~V~~a~ 265 (858)
.|.+.|.++|.|.++.+.+.+.| .|-|...+..+|..|+..|+..+|.+++|.|.++.
T Consensus 12 ~L~~~f~~h~~V~sv~l~~~~dg~~~A~V~v~~~q~A~~~v~~LhR~KiG~KRI~Vs~~~ 71 (73)
T d2dgxa1 12 LLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKKILVSLAT 71 (73)
T ss_dssp HHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTEEEEEEECC
T ss_pred HHHHHHHhheeEEEEEEEeccCCcEEEEEEcCCHHHHHHHHHHHHHHhcCCeEEEEEEec
Confidence 45578999999999998777666 79999999999999999999999999999998874
No 177
>d1uw4a_ d.58.7.4 (A:) RNA processing protein UPF3x, RRM domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.89 E-value=0.03 Score=47.79 Aligned_cols=64 Identities=5% Similarity=0.051 Sum_probs=53.4
Q ss_pred cEEEEeCCCCCCCHHHHHHHhhcCCCEEEEE-eCC------CcccEEEEEEcCHHHHHHHHHHhcCCcccc
Q 003009 193 RTLFVRNINSNVEDSELRALFEQYGDIRTLY-TAC------KHRGFVMISYYDIRAARTAMRALQNKPLRR 256 (858)
Q Consensus 193 ~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~-~~~------ksrG~aFV~F~d~e~A~~Al~~Lng~~l~g 256 (858)
++|.|+.||+.+||+++.+.+...|++.... ..+ ..-.-|+|.|.+.++.....+..+|..+.+
T Consensus 2 tKvVvRrLPP~Lte~~F~~~l~~~~~~d~~~f~~Gk~s~~~~~~SRAYi~F~~~~~v~~F~~~f~g~~F~D 72 (91)
T d1uw4a_ 2 SKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLD 72 (91)
T ss_dssp CEEEEEEECTTCCHHHHHHHHCSCCCEEEEEEEESCCSSTTCCCEEEEEEESSSHHHHHHHHHHTTCEEEC
T ss_pred ceEEEecCCCCCCHHHHHHHhCCcCceEEEEEeCCCcCCCCCcceEEEEEeCCHHHHHHHHHHcCCcEEEc
Confidence 6899999999999999999999999887665 111 122469999999999999999999988854
No 178
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.58 E-value=0.048 Score=46.13 Aligned_cols=70 Identities=19% Similarity=0.329 Sum_probs=55.8
Q ss_pred CCCcEEEEeCCCCCCCH---------HHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCCcccccccc
Q 003009 190 HPSRTLFVRNINSNVED---------SELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLD 260 (858)
Q Consensus 190 ~~s~tLfV~NLP~~vte---------eeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~~l~gr~L~ 260 (858)
.+..||.|.=...+.++ .+|.+.|..||+|.-++. -.+...|+|.+-+.|-+|+. +++.++.|+.|.
T Consensus 13 PpDgTIvV~i~~~s~e~~~~FDe~l~~~Llq~l~~~GeViLvRF---v~d~mwVTF~dG~SAL~al~-l~g~~v~G~~l~ 88 (95)
T d1ufwa_ 13 PLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRI---NQGQMLVTFADSHSALSVLD-VDGMKVKGRAVK 88 (95)
T ss_dssp CTTCEEEEEESSCCHHHHHSCCHHHHHHHHHHHHHHSCCSEEEE---ETTEEEEECSCSHHHHHHHH-GGGSEETTEEEE
T ss_pred CCCcEEEEEeccCCccccccCCHHHHHHHHHHHhhCCeEEEEEE---eCCeEEEEECCcHHHHHHhc-cCCeEEcceEEE
Confidence 46678888655444333 468889999999987764 34678999999999999998 899999999998
Q ss_pred ccc
Q 003009 261 IHF 263 (858)
Q Consensus 261 V~~ 263 (858)
|.-
T Consensus 89 It~ 91 (95)
T d1ufwa_ 89 ISG 91 (95)
T ss_dssp EEC
T ss_pred Eec
Confidence 864
No 179
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=83.66 E-value=0.91 Score=38.64 Aligned_cols=56 Identities=14% Similarity=0.284 Sum_probs=46.5
Q ss_pred ccceeeeCCCCCCchhHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhC
Q 003009 277 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLN 335 (858)
Q Consensus 277 ~~tLfV~NLp~~vTeedL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~Ln 335 (858)
..-+|.-..|..+...||.++|++||-|.-..|... -|||...+.++|+.+++.++
T Consensus 15 RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswIddT---Sa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 15 RDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDT---SAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEEETT---EEEEECSCHHHHHHHHHHHH
T ss_pred cceeEEEeCCcccchhHHHHHhcCCCceEEEEecCc---eEEEEecCHHHHHHHHHHhc
Confidence 346888889999999999999999998765555432 59999999999999988654
No 180
>d1whva_ d.58.7.1 (A:) Poly(A)-specific ribonuclease PARN {Mouse (Mus musculus) [TaxId: 10090]}
Probab=77.32 E-value=2.9 Score=35.37 Aligned_cols=57 Identities=14% Similarity=0.246 Sum_probs=46.4
Q ss_pred CCcEEEEeCCCCCCCHHHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhc
Q 003009 191 PSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ 250 (858)
Q Consensus 191 ~s~tLfV~NLP~~vteeeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Ln 250 (858)
....||.-..|..+...||.++|+.||.|.--.+ ..--|||.-.+.++|+.++..+.
T Consensus 14 ~RdHVf~~tFP~~Wk~~dI~~lFSpfG~V~VswI---ddTSa~V~L~~~e~~~~v~~~~~ 70 (100)
T d1whva_ 14 KRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWI---DDTSAFVSLSQPEQVQIAVNTSK 70 (100)
T ss_dssp CCCSEEEEECCTTCCHHHHHHHHTTTCSCCCEEE---ETTEEEEECSCHHHHHHHHHHHH
T ss_pred CcceeEEEeCCcccchhHHHHHhcCCCceEEEEe---cCceEEEEecCHHHHHHHHHHhc
Confidence 3456888899999999999999999998764434 33469999999999998887654
No 181
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=31.05 E-value=30 Score=29.37 Aligned_cols=40 Identities=10% Similarity=0.116 Sum_probs=31.9
Q ss_pred HHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhc
Q 003009 207 SELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ 250 (858)
Q Consensus 207 eeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Ln 250 (858)
.++++.+..+|.+ +++| +...+|..|.+.++|++|.+.+.
T Consensus 60 ~~~~~~L~~~g~~---~MSG-SGstvF~~f~~~~~a~~~~~~l~ 99 (120)
T d1oj4a2 60 DAVLSWLLEYAPS---RLTG-TGACVFAEFDTESEARQVLEQAP 99 (120)
T ss_dssp HHHHHHHTTTSCE---EECT-TSSCEEEEESSHHHHHHHHHHSC
T ss_pred HHHHHHHhhcccc---eecC-CCCEEEEEeCCHHHHHHHHHHcC
Confidence 4566777788864 3555 67789999999999999999874
No 182
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=29.36 E-value=33 Score=29.12 Aligned_cols=41 Identities=20% Similarity=0.168 Sum_probs=32.2
Q ss_pred hHHHHhhcccCceEEEEeCCCCccEEEEEEcCHHHHHHHHHHhCC
Q 003009 292 EDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNR 336 (858)
Q Consensus 292 edL~~~Fs~fG~I~~irit~~srG~aFVeF~d~e~A~kAl~~LnG 336 (858)
.++++.+..+|. ++++| +....|..|++.++|.+|.+.|..
T Consensus 60 ~~~~~~L~~~g~---~~MSG-SGstvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 60 DAVLSWLLEYAP---SRLTG-TGACVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp HHHHHHHTTTSC---EEECT-TSSCEEEEESSHHHHHHHHHHSCG
T ss_pred HHHHHHHhhccc---ceecC-CCCEEEEEeCCHHHHHHHHHHcCc
Confidence 456666777885 46776 456799999999999999999853
No 183
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=21.52 E-value=64 Score=26.82 Aligned_cols=44 Identities=18% Similarity=0.051 Sum_probs=34.6
Q ss_pred HHHHHHhhcCCCEEEEEeCCCcccEEEEEEcCHHHHHHHHHHhcCC
Q 003009 207 SELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNK 252 (858)
Q Consensus 207 eeLr~lFs~fG~I~sv~~~~ksrG~aFV~F~d~e~A~~Al~~Lng~ 252 (858)
+++++.+.++|... +.++| +...+|.-|.+.++|++|.+.|...
T Consensus 66 ~~~~~~l~~~g~~~-~~mSG-SGst~F~l~~~~~~a~~~~~~l~~~ 109 (120)
T d1ueka2 66 KEVRGRMRALGLRG-VLMSG-SGSAFFGLAEGPDHARRAAEALRAW 109 (120)
T ss_dssp HHHHHHHHHTTCEE-EEECT-TSSCEEEECSSHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhhh-eeecC-CCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 56777778888755 34555 6678999999999999999988654
Done!