Query 003010
Match_columns 858
No_of_seqs 365 out of 2466
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 09:58:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003010.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003010hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3se6_A Endoplasmic reticulum a 100.0 8E-161 3E-165 1465.7 84.3 828 6-852 65-960 (967)
2 2xdt_A Endoplasmic reticulum a 100.0 8E-156 3E-160 1424.3 83.8 824 6-852 5-892 (897)
3 4fke_A Aminopeptidase N; zinc 100.0 4E-157 1E-161 1439.6 69.6 828 6-852 7-902 (909)
4 1z5h_A Tricorn protease intera 100.0 9E-142 3E-146 1282.4 62.2 742 14-830 1-746 (780)
5 2gtq_A Aminopeptidase N; alani 100.0 1.1E-98 4E-103 910.4 54.6 721 6-777 9-788 (867)
6 3ebh_A PFA-M1, M1 family amino 100.0 1.9E-89 6.5E-94 820.3 61.6 705 11-759 11-790 (889)
7 3b34_A Aminopeptidase N; prote 100.0 4.2E-89 1.4E-93 823.4 61.8 709 5-763 31-793 (891)
8 3cia_A Cold-active aminopeptid 100.0 6.3E-84 2.2E-88 759.5 23.8 526 6-617 18-559 (605)
9 3u9w_A Leukotriene A-4 hydrola 100.0 1.1E-81 3.6E-86 741.0 31.6 448 7-476 6-474 (608)
10 2xq0_A LTA-4 hydrolase, leukot 100.0 1.7E-81 5.8E-86 740.7 21.8 528 6-619 20-589 (632)
11 3rjo_A Endoplasmic reticulum a 100.0 1E-69 3.6E-74 613.4 39.9 379 456-852 1-409 (419)
12 4fgm_A Aminopeptidase N family 100.0 1.2E-27 4.1E-32 277.7 20.6 297 154-459 119-451 (597)
13 1bqb_A Protein (aureolysin); h 76.1 6.7 0.00023 40.6 8.2 103 233-339 67-177 (301)
14 1u4g_A Elastase, pseudolysin; 74.2 20 0.00067 37.1 11.1 98 233-341 73-175 (301)
15 3cqb_A Probable protease HTPX 73.9 3.2 0.00011 36.0 4.4 68 239-317 27-99 (107)
16 3dnz_A Thermolysin; hydrolase, 69.0 8.4 0.00029 40.0 6.9 102 232-341 69-177 (316)
17 1lsh_A Lipovitellin (LV-1N, LV 68.3 38 0.0013 41.9 14.0 190 550-762 356-557 (1056)
18 2y3u_A Collagenase, collagenas 67.0 2.3 7.8E-05 50.0 2.5 39 301-339 422-469 (785)
19 2qk1_A Protein STU2; STU2P, XM 65.7 63 0.0021 32.2 12.8 130 565-713 29-174 (249)
20 2vqx_A Metalloproteinase; ther 63.8 11 0.00039 39.5 6.8 105 232-341 89-197 (341)
21 4ger_A Gentlyase metalloprotea 61.8 41 0.0014 34.7 10.4 108 232-350 62-176 (304)
22 3nqx_A MCP-02, secreted metall 52.2 73 0.0025 32.8 10.3 99 233-341 74-176 (306)
23 3c37_A Peptidase, M48 family; 41.4 31 0.0011 34.7 5.6 19 298-316 97-115 (253)
24 3iuk_A Uncharacterized protein 30.1 76 0.0026 35.9 7.0 54 406-459 495-554 (562)
25 2ejq_A Hypothetical protein TT 28.9 21 0.00073 31.9 1.7 44 278-324 68-111 (130)
26 1r55_A ADAM 33; metalloproteas 26.0 51 0.0018 32.1 4.1 14 300-313 135-148 (214)
27 3o0y_A Lipoprotein; structural 24.1 1.4E+02 0.0049 34.0 7.8 44 300-344 431-485 (609)
28 2c9r_A COPC, copper resistance 23.5 2.3E+02 0.0077 23.8 7.2 57 46-106 18-84 (102)
29 1yp1_A FII; FII hydrolase; 1.9 22.9 81 0.0028 30.3 4.8 13 301-313 135-147 (202)
30 2w15_A Zinc metalloproteinase 22.5 98 0.0034 29.6 5.4 14 300-313 135-148 (202)
31 1bud_A Protein (acutolysin A); 22.0 93 0.0032 29.7 5.0 14 300-313 132-145 (197)
32 4ady_A RPN2, 26S proteasome re 21.5 7.4E+02 0.025 29.8 13.4 95 659-761 523-621 (963)
33 1lyq_A PCOC copper resistance 21.4 2.4E+02 0.0083 23.7 7.0 28 78-106 58-86 (104)
34 1oyz_A Hypothetical protein YI 21.1 5.8E+02 0.02 24.8 11.8 96 659-765 142-237 (280)
35 2ero_A VAP-1, vascular apoptos 20.1 1.1E+02 0.0038 33.3 5.7 14 300-313 145-158 (427)
36 3e11_A Predicted zincin-like m 20.1 55 0.0019 28.4 2.5 35 277-313 68-102 (114)
No 1
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=100.00 E-value=7.9e-161 Score=1465.73 Aligned_cols=828 Identities=33% Similarity=0.588 Sum_probs=755.4
Q ss_pred CCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEeCCceEeEEEEEeccCCCC--ccccCeeEEEec
Q 003010 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSS--KALEPTKVELVE 83 (858)
Q Consensus 6 ~~~rLp~~v~P~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~Lh~~~l~I~~~~~~~~~~~~~--~~~~~~~~~~~~ 83 (858)
+.+|||++++|.||+|+|++++++.+|+|+|+|++++.++++.|+||+++|+|+++.+.+..+... .........++
T Consensus 65 ~~~RLP~~v~P~hY~L~L~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~I~~v~v~~~~~~~~~~~~~~~~~~~~~- 143 (967)
T 3se6_A 65 QELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYP- 143 (967)
T ss_dssp CCSSCCTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCCSEEEEECSSCEEEEEEEEECC---CCSSCEECEEEEEG-
T ss_pred ccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEEEcCCCEEEEECCCCEEEEEEEeccCCcccccccceeeeEEec-
Confidence 468999999999999999999999999999999999999999999999999999999864321100 01111222333
Q ss_pred CCeEEEEEeCCCcCCc-eEEEEEEEEeeeCCCCcceEEeeecc-CCeeeecccccCCcCCccceeccCCCCCCeeEEEEE
Q 003010 84 ADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKIT 161 (858)
Q Consensus 84 ~~~~l~i~l~~~L~~g-~~~l~i~y~g~l~~~~~G~y~~~y~~-~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~ka~f~l~ 161 (858)
.++.+.|.++++|++| .|+|+|.|+|.+++++.|||++.|.+ +|+.+++++|||||++||+||||||||++||+|+|+
T Consensus 144 ~~~~l~i~l~~~L~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~FPC~DeP~~KAtf~it 223 (967)
T 3se6_A 144 AHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIK 223 (967)
T ss_dssp GGTEEEEECSSCCCTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTGGGTSCBCCSTTCCBEEEEE
T ss_pred CCCEEEEEcCCccCCCCeEEEEEEEEEecCCCccceeeeeeEcCCCceEEEEEEecccCCCCeEEEecCCcCceeEEEEE
Confidence 5678999999999999 89999999999999999999999986 788999999999999999999999999999999999
Q ss_pred EEeCCCCeEEecCCccce-eecCCeEEEEEEeCCCCcceEEEEEEeeeeEeeecccCCeEEEEEEcCCchhhHHHHHHHH
Q 003010 162 LDVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVA 240 (858)
Q Consensus 162 i~~p~~~~a~Sn~~~~~~-~~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~~ 240 (858)
|++|++|+|+|||++.++ ...+++++++|+.|||||+|++||+||+|+.++..+.+|+++++|++|+..++++++++.+
T Consensus 224 I~~p~~~~alSN~~~~~~~~~~~g~~~~~F~~t~pmstYLva~~vg~f~~~~~~~~~gv~v~v~~~p~~~~~~~~al~~~ 303 (967)
T 3se6_A 224 IRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQAS 303 (967)
T ss_dssp EEECTTCEEEESSCEEEEEECTTSCEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECGGGGGGGHHHHHHH
T ss_pred EEECCCcEEEeCCCcccceecCCCeEEEEEecCCCccceeEEEEEeceEEEEeecCCCcEEEEEeCcchHHHHHHHHHHH
Confidence 999999999999998765 3457789999999999999999999999999887667899999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCcceeecCCCCCccccccccceeecccccccCCCChHHHHHHHHHHHHHHHHHHHhcCcccc
Q 003010 241 VKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTM 320 (858)
Q Consensus 241 ~~~l~~~e~~fg~~yp~~kld~v~~P~~~~gamEn~Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~ 320 (858)
++++++||++||+|||++|+|+|++|+|+.||||||||++|+|..+|++++.++...++.++.+||||+|||||||+|||
T Consensus 304 ~~~l~~~e~~fg~~YP~~k~d~v~vPdf~~GaMEn~Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFGnlVT~ 383 (967)
T 3se6_A 304 LKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTM 383 (967)
T ss_dssp HHHHHHHHHHHTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBTTTEEE
T ss_pred HHHHHHHHHhcCCCCCcccccEEEecCCCCcccccCCccccchhheecCcccCCHHhhHhHHHHHHHHHHHHHhcCcccc
Confidence 99999999999999999999999999999999999999999999999999988888999999999999999999999999
Q ss_pred CccchhHHhhhHHHHHHHHHHhhhCcchhHHHHHHHHHHHHHhhhccCCCCceeeecCCchhhhhccccccccchhHHHH
Q 003010 321 EWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIR 400 (858)
Q Consensus 321 ~~w~d~WLnEGfA~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~pi~~~~~~~~~i~~~f~~i~Y~Kga~vl~ 400 (858)
+||+|+|||||||+|++++++++.+|+|.+...|+.+...++..|+..++||+..++.++.+++..|+.++|.||++|||
T Consensus 384 ~wW~dlWLnEGFAty~e~~~~~~~~p~~~~~~~~~~~~~~al~~D~~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KGa~vL~ 463 (967)
T 3se6_A 384 EWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACILN 463 (967)
T ss_dssp SSGGGTHHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHTTTTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHHH
T ss_pred CCCccccHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhhcccCCCCceeecCCHHHHHHhcchhhhhHHHHHHH
Confidence 99999999999999999999999999999887776665678999999999999999999999999999999999999999
Q ss_pred HHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhc---------------------------cCCCHHHHHHHhhc
Q 003010 401 MLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG---------------------------SGEPVNKLMNSWTK 453 (858)
Q Consensus 401 mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~---------------------------sg~~l~~~~~~W~~ 453 (858)
||+..||++.|+++||.|+++|+|++++++|||++++++ +|.++++||++|+.
T Consensus 464 mL~~~lG~e~F~~gLr~Yl~~~~~~nat~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~~ 543 (967)
T 3se6_A 464 MLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWTL 543 (967)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHCC-------------------------CCCCCCHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCcCHHHHHHHHhc
Confidence 999999999999999999999999999999999999995 68899999999999
Q ss_pred CCCcceEEEEEeCCEEEEEEEeecCCCCC---------CCCeeEEEEEEEeCccceeeeEEeecceeEEEeccccccccc
Q 003010 454 QKGYPVISVKVKEEKLELEQSQFLSSGSP---------GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSIS 524 (858)
Q Consensus 454 ~~G~P~l~v~~~~~~~~l~Q~rf~~~~~~---------~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 524 (858)
|+|||+|+|++++++++|+|+||+.++.. .+..|+|||+|.++++.....+|+..++.++.++.
T Consensus 544 q~G~Pvl~V~~~~~~~~l~Q~rf~~~~~~~~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~~~~------- 616 (967)
T 3se6_A 544 QKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPE------- 616 (967)
T ss_dssp SCSCEEEEEEEETTEEEEEEEECCCC-----------CCSCCCCCCEEEEESSCCCCEEECCCSSEEEEECSS-------
T ss_pred CCCCcEEEEEecCCEEEEEeeeecCCCCCCccccccccCCceEEEEEEEEeCCCCccceEEecCCceEEeccC-------
Confidence 99999999999989999999999875432 23589999999887655445677776666666642
Q ss_pred CCCCCCceEEEcCCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHhccCCHHHHHHHHHhcccCCc
Q 003010 525 KEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETE 602 (858)
Q Consensus 525 ~~~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~~--~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~ 602 (858)
.+ +||++|.++.||||||||+++|++|+++|..+ .|++.||||||+|+|+||++|+++|+.+|+|++||++|++
T Consensus 617 --~~--~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~~ 692 (967)
T 3se6_A 617 --KT--SWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETS 692 (967)
T ss_dssp --CC--SCEEESGGGCSSCEEEEETTHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHTTGGGTCCC
T ss_pred --CC--ceEEEeCCccEEEEEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCc
Confidence 34 89999999999999999999999999999753 6999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHhHHHHHhcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 003010 603 YTVLSNLITISYKIGRIAADA-RPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEA 681 (858)
Q Consensus 603 ~~~w~~~~~~l~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g~~~c~~~A 681 (858)
|+||.++++.|.++.+++... .++.+..|++|+++++.++++++||+ +++++.++++|..++.+||.+|+++|+++|
T Consensus 693 ~~~w~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~--~~~~~~~~~lR~~il~~ac~~g~~~c~~~A 770 (967)
T 3se6_A 693 SPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVIDRQSWS--DKGSVWDRMLRSALLKLACDLNHAPCIQKA 770 (967)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTHHHHHHCCSS--CCSCHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHcCCC--CCCcHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 999999999999999988632 24578899999999999999999998 468899999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Q 003010 682 SKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLL 761 (858)
Q Consensus 682 ~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~~ll~~~L~~~l 761 (858)
+++|++|++++....||||+|.+|||++++ ++++|+++|++|+++++++||..+|.||||++|+++++++|++++
T Consensus 771 ~~~f~~~~~~~~~~~i~~~lr~~Vyc~~~~-----~~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~~ll~~~L~~~l 845 (967)
T 3se6_A 771 AELFSQWMESSGKLNIPTDVLKIVYSVGAQ-----TTAGWNYLLEQYELSMSSAEQNKILYALSTSKHQEKLLKLIELGM 845 (967)
T ss_dssp HHHHHHHHHTTTCSCCCHHHHHHHHHHHTT-----SHHHHHHHHHHHHHCSCHHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCcccCChhhhhHhHhhhhc-----cHHHHHHHHHHHhccCCHHHHHHHHHHhcCCCCHHHHHHHHHHHh
Confidence 999999998754446999999999987643 488999999999999999999999999999999999999999999
Q ss_pred cC-ccccccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchhHHHHHhccccCCHHHHHHHHhhhc------
Q 003010 762 SS-EVRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPVCCLHLSNYVFRFST------ 830 (858)
Q Consensus 762 ~~-~ir~qd~~~~~~-vs~~--g~~~aw~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~~~~v~~F~~------ 830 (858)
++ .||+||+..++. |+.| |++++|+|+++||+.|.++|+.+ +.++++|..+++.|+|+++++++++||+
T Consensus 846 ~~~~i~~qd~~~~~~~v~~n~~g~~~~w~f~~~nw~~i~~~~~~~~~~~~~~i~~~~~~~~t~~~l~~~~~f~~~~~~~~ 925 (967)
T 3se6_A 846 EGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQG 925 (967)
T ss_dssp HCSSSCGGGHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHSCTTSHHHHHHHHTTTTTCCSHHHHHHHHHHHHHSCSSS
T ss_pred CcCcCcHhHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccCCHHHHHHHHHHHHhCCccc
Confidence 87 489999999998 8777 99999999999999999999854 6799999999999999999999999998
Q ss_pred -------------cccccccccccchhHHHHHhhh
Q 003010 831 -------------LTYVHFKCFPLDPFFVSFCCLA 852 (858)
Q Consensus 831 -------------~~~i~w~~~~~~~~~~~~~~~~ 852 (858)
..||+|++++.+.+.+|+..-+
T Consensus 926 ~~~~~~~q~le~i~~ni~W~~~~~~~i~~wl~~~~ 960 (967)
T 3se6_A 926 SHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNT 960 (967)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7899999999999999997644
No 2
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=100.00 E-value=8.4e-156 Score=1424.28 Aligned_cols=824 Identities=32% Similarity=0.567 Sum_probs=755.4
Q ss_pred CCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEeCCceEeEEEEEeccCCCCccc--cCeeEEEec
Q 003010 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKAL--EPTKVELVE 83 (858)
Q Consensus 6 ~~~rLp~~v~P~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~Lh~~~l~I~~~~~~~~~~~~~~~~--~~~~~~~~~ 83 (858)
+.+|||.+++|.||+|+|.+|+++.+|+|+|+|++++.++++.|+||+++|+|.++.+.+.++ ..+ ....+..+.
T Consensus 5 ~~~rLp~~~~p~hY~l~L~~d~~~~~f~G~v~I~~~~~~~~~~I~L~~~~l~I~~v~v~~~~~---~~~~~~~~~~~~~~ 81 (897)
T 2xdt_A 5 NKIRLPEYVIPVHYDLLIHANLTTLTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGAG---ERLSEEPLQVLEHP 81 (897)
T ss_dssp CCSSCCSSEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCEEEEEEECSSCEEEEEEEEEC-------CEEEECEEEEET
T ss_pred ccCcCCCCcEeeEEEEEEEEecCCCeEEEEEEEEEEEEcCCCEEEEEeCCCEEEEEEEEecCC---cccccccceeEEcC
Confidence 568999999999999999999999999999999999998899999999999999999865211 122 234456677
Q ss_pred CCeEEEEEeCCCcCCc-eEEEEEEEEeeeCCCCcceEEeeecc-CCeeeecccccCCcCCccceeccCCCCCCeeEEEEE
Q 003010 84 ADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKIT 161 (858)
Q Consensus 84 ~~~~l~i~l~~~L~~g-~~~l~i~y~g~l~~~~~G~y~~~y~~-~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~ka~f~l~ 161 (858)
.++.++|.++++|++| .|+|+|.|+|.+++++.|||++.|.+ +|+.+++++|||||++||+||||||||++||+|+|+
T Consensus 82 ~~~~l~i~l~~~L~~g~~~~L~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~it 161 (897)
T 2xdt_A 82 RQEQIALLAPEPLLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELRILASTQFEPTAARMAFPCFDEPAFKASFSIK 161 (897)
T ss_dssp TTTEEEEEEEEEECTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTHHHHSCBCCSTTSCBEEEEE
T ss_pred CCcEEEEEeCCccCCCCEEEEEEEEEEEeCCCCceeEeeeeecCCCceeEEEEecceecccceEEeccCCccccCeEEEE
Confidence 7889999999999999 79999999999999999999999965 788899999999999999999999999999999999
Q ss_pred EEeCCCCeEEecCCcccee-ecCCeEEEEEEeCCCCcceEEEEEEeeeeEeeecccCCeEEEEEEcCCchhhHHHHHHHH
Q 003010 162 LDVPSELVALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVA 240 (858)
Q Consensus 162 i~~p~~~~a~Sn~~~~~~~-~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~~ 240 (858)
|++|++|+|+|||++.++. ..+++++++|+.+||||||++||+||+|..++..+.+|+++++|++|+..++++++++.+
T Consensus 162 I~~p~~~~alSN~~~~~~~~~~~g~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~gv~v~v~~~~~~~~~~~~al~~~ 241 (897)
T 2xdt_A 162 IRREPRHLAISNMPLVKSVTVAEGLIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKINQADYALDAA 241 (897)
T ss_dssp EEECTTCEEEESSCEEEEEEEETTEEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECTTTGGGCHHHHHHH
T ss_pred EEEcCCceEecCCCccceEecCCCEEEEEEeCCCccchhheEEEEEcceeeccccCCCeeEEEEcCCChHHHHHHHHHHH
Confidence 9999999999999988763 456899999999999999999999999999886567799999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCcceeecCCCCCccccccccceeecccccccCCCChHHHHHHHHHHHHHHHHHHHhcCcccc
Q 003010 241 VKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTM 320 (858)
Q Consensus 241 ~~~l~~~e~~fg~~yp~~kld~v~~P~~~~gamEn~Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~ 320 (858)
++++++|+++||+|||++|+|+|++|+|+.||||||||++|+|..+|++++.++...++.++.+||||+|||||||+|||
T Consensus 242 ~~~l~~~e~~fg~~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~~~~~~~~~~~~~~~viaHElAHqWFGnlVT~ 321 (897)
T 2xdt_A 242 VTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTM 321 (897)
T ss_dssp HHHHHHHHHHTTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEEE
T ss_pred HHHHHHHHHHhCCCCCccceeEEEeCCCcccchhcCCeeEEeeeeEeECCCCCcHHHHHHHHHHHHHHHHHHHcCCEecc
Confidence 99999999999999999999999999999999999999999999999999988888899999999999999999999999
Q ss_pred CccchhHHhhhHHHHHHHHHHhhhCcchhHHHHHHHHHHHHHhhhccCCCCceeeecCCchhhhhccccccccchhHHHH
Q 003010 321 EWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIR 400 (858)
Q Consensus 321 ~~w~d~WLnEGfA~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~pi~~~~~~~~~i~~~f~~i~Y~Kga~vl~ 400 (858)
+||+|+|||||||+|++++++++.+|+|.++.+|......++..|+..++||+..++.+|.++...|+.++|.||++|||
T Consensus 322 ~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~f~~~~~~a~~~D~~~~~~Pi~~~v~~p~~i~~~fd~i~Y~KGa~vl~ 401 (897)
T 2xdt_A 322 EWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYFFGKCFDAMEVDALNSSHPVSTPVENPAQIREMFDDVSYDKGACILN 401 (897)
T ss_dssp SSGGGTHHHHHHHHHHHHHHHHHHCGGGCGGGGHHHHHHHHHHHHTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHHH
T ss_pred CCcchhhhhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHhhcccCCCCCEEeCCCHHHHHHhcchhhhhhHHHHHH
Confidence 99999999999999999999999999999888885555578889999999999999999999999999999999999999
Q ss_pred HHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhc-------------------c--------CCCHHHHHHHhhc
Q 003010 401 MLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG-------------------S--------GEPVNKLMNSWTK 453 (858)
Q Consensus 401 mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~-------------------s--------g~~l~~~~~~W~~ 453 (858)
||+..||++.|+++|+.|+++|+|++++++|||++++++ + |.|+++||++|++
T Consensus 402 mL~~~lG~e~F~~gl~~Yl~~~~~~~a~~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~g~dl~~~~~~W~~ 481 (897)
T 2xdt_A 402 MLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASICPTDGVKGMDGFCSRSQHSSSSSHWHQEGVDVKTMMNTWTL 481 (897)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHTC----------------------------CCCHHHHHHHHHS
T ss_pred HHHHHhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCHHHHHHHhhc
Confidence 999999999999999999999999999999999999996 5 8999999999999
Q ss_pred CCCcceEEEEEeCCEEEEEEEeecCCCCC---CCCeeEEEEEEEeCccceeeeEEeecceeEEEecccccccccCCCCCC
Q 003010 454 QKGYPVISVKVKEEKLELEQSQFLSSGSP---GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNG 530 (858)
Q Consensus 454 ~~G~P~l~v~~~~~~~~l~Q~rf~~~~~~---~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 530 (858)
|+|||+++|++++++++|+|+||+.++.. ....|+|||+|.++++.....+|+..++.++.++. .+
T Consensus 482 q~G~P~l~v~~~~~~~~l~Q~~f~~~~~~~~~~~~~w~iPi~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~-- 550 (897)
T 2xdt_A 482 QKGFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILPE---------EV-- 550 (897)
T ss_dssp SCSEEEEEEEEETTEEEEEEEEECCC-----CCCCCCCEEEEEEESSCSSCEEEEECSSEEEEECSS---------CC--
T ss_pred CCCceEEEEEEcCCEEEEEEEEeecCCCCCCCCCceEEEEEEEEeCCCCccceEEecCCceEEEccC---------CC--
Confidence 99999999999988999999999876532 24589999999876554445678887666666531 34
Q ss_pred ceEEEcCCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHhccCCHHHHHHHHHhcccCCcHHHHHH
Q 003010 531 GWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSN 608 (858)
Q Consensus 531 ~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~~--~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~ 608 (858)
+||++|.++.||||||||+++|+.|+.+|..+ .|++.+|||||+|+|+||++|.++++.+|+|++||++|++|+||.+
T Consensus 551 ~~i~~N~~~~gyyrV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~~~~~w~~ 630 (897)
T 2xdt_A 551 EWIKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQ 630 (897)
T ss_dssp SCEEESGGGCSSCEEEECTTHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHTTTSSCHHHHHHHHGGGGGCCCHHHHHH
T ss_pred ceEEECCCceEEEEEEcCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCcHHHHHH
Confidence 79999999999999999999999999999753 7999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccChhHH---HHHHHHHHHHhHHHHHhcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 003010 609 LITISYKIGRIAADARPELL---DYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRF 685 (858)
Q Consensus 609 ~~~~l~~l~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g~~~c~~~A~~~f 685 (858)
+++.|.+|..++... +.+ ..|++|+++++.++++++||+. ++++.++++|..++.+||.+|+++|+++|+++|
T Consensus 631 ~~~~l~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~lg~~~--~~~~~~~~lr~~~~~~ac~~g~~~c~~~a~~~f 706 (897)
T 2xdt_A 631 GLNELIPMYKLMEKR--DMNEVETQFKAFLIRLLRDLIDKQTWTD--EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYF 706 (897)
T ss_dssp HHHHHHHHHHHHHTS--SCHHHHHHHHHHHHHHHHHHHHTCCSSC--CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC--hhhhHHHHHHHHHHHHHHHHHHHcCCCC--CCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 999999999998753 245 8899999999999999999986 678999999999999999999999999999999
Q ss_pred HHhhcCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhcC-c
Q 003010 686 HAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSS-E 764 (858)
Q Consensus 686 ~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~~ll~~~L~~~l~~-~ 764 (858)
++|+.++..+.||||+|.+|||++ + |++++|++||++|+++++++||..+|.||||++|+++|+++|++++++ .
T Consensus 707 ~~~~~~~~~~~i~~~lr~~vy~~~---~--g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~c~~~~~~l~~~L~~~~~~~~ 781 (897)
T 2xdt_A 707 RKWKESNGNLSLPVDVTLAVFAVG---A--QSTEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWLLDESFKGDK 781 (897)
T ss_dssp HHHHHTTTCSCCCHHHHHHHHHHH---T--TSHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCSS
T ss_pred HHHhcCCCcCCCCcchhhhEEEEe---c--CCHHHHHHHHHHHHccCCHHHHHHHHHHhccCCCHHHHHHHHHHHhCCCC
Confidence 999987544589999999999875 3 799999999999999999999999999999999999999999999975 6
Q ss_pred cccccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchhHHHHHhccccCCHHHHHHHHhhhc----------
Q 003010 765 VRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPVCCLHLSNYVFRFST---------- 830 (858)
Q Consensus 765 ir~qd~~~~~~-vs~~--g~~~aw~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~~~~v~~F~~---------- 830 (858)
||.||...++. ++.| |++++|+|+++||+.|.++|+++ +.++++|..+++.|+|+++++++++||+
T Consensus 782 i~~qd~~~~~~~v~~n~~g~~~~~~~~~~n~~~i~~~~~~~~~~~~~~i~~~~~~~~t~~~~~~~~~f~~~~~~~~~~~~ 861 (897)
T 2xdt_A 782 IKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKENGSQLR 861 (897)
T ss_dssp SCGGGHHHHHHHHHTSTTTHHHHHHHHHHTHHHHHHHHCTTCHHHHHHHHHTTTTCCSHHHHHHHHHHHHHTGGGTTTCH
T ss_pred CcHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccCCHHHHHHHHHHHHhCCccchhHH
Confidence 99999999998 8766 99999999999999999999854 5789999999999999999999999997
Q ss_pred ---------cccccccccccchhHHHHHhhh
Q 003010 831 ---------LTYVHFKCFPLDPFFVSFCCLA 852 (858)
Q Consensus 831 ---------~~~i~w~~~~~~~~~~~~~~~~ 852 (858)
..||+|++++.+.+..|++...
T Consensus 862 ~~~~~le~i~~n~~w~~~~~~~i~~wl~~~~ 892 (897)
T 2xdt_A 862 CVQQTIETIEENIGWMDKNFDKIRVWLQSEK 892 (897)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHhhh
Confidence 6899999999999999998754
No 3
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=100.00 E-value=4.1e-157 Score=1439.63 Aligned_cols=828 Identities=32% Similarity=0.552 Sum_probs=746.9
Q ss_pred CCCCCCCCceeeEEEEEEEecCCC-----CeEEEEEEEEEEEEcCCCEEEEEeCCceEeEE----EEEeccCCCCccccC
Q 003010 6 GQPRLPKFAVPKRYDIRLTPDLTS-----CKFGGSVAIDVDVVGDTKFIVLNAADLTINNR----SVSFTNKVSSKALEP 76 (858)
Q Consensus 6 ~~~rLp~~v~P~~Y~l~l~~d~~~-----~~f~G~v~I~~~~~~~~~~i~Lh~~~l~I~~~----~~~~~~~~~~~~~~~ 76 (858)
+++|||++|+|+||+|+|+|+++. ++|+|+|+|++++.++++.|+||+++|+|... .+.+. +.......
T Consensus 7 ~~yRLP~~v~P~hY~l~L~~~l~~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~i~~~~~~~~~~~~--~~~~~~~~ 84 (909)
T 4fke_A 7 NRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYTTQGHMVVLRGV--GDSQVPEI 84 (909)
T ss_dssp GSSSCCSSEEEEEEEEEEEECCSCCSSSCCEEEEEEEEEEEESSCEEEEEEECCSCEECCSSSSCEEEES--TTCCCCCE
T ss_pred ccccCcCCCEeEEEEEEEEEcCcCCCCCCceEEEEEEEEEEEecCCCEEEEEcCCCEEEeeeeEEEEecC--CCcceecc
Confidence 579999999999999999998753 58999999999999999999999999999763 23221 12233345
Q ss_pred eeEEEecCCeEEEEEeCCCcCCc-eEEEEEEEEeeeCCCCcceEEeeeccCCeeeecccccCCcCCccceeccCCCCCCe
Q 003010 77 TKVELVEADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACK 155 (858)
Q Consensus 77 ~~~~~~~~~~~l~i~l~~~L~~g-~~~l~i~y~g~l~~~~~G~y~~~y~~~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~k 155 (858)
....++...+.++|.++++|++| .|+|+|.|+|.+++++.|||++.|.++|..+++++|||||++||+||||||||++|
T Consensus 85 ~~~~~~~~~~~l~i~l~~~l~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~~~~~~~~Tqfep~~AR~~FPc~DeP~~K 164 (909)
T 4fke_A 85 DRTELVELTEYLVVHLKGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMK 164 (909)
T ss_dssp EEEEEETTTTEEEEEEEEEECTTCEEEEEEEEEEECCSSSSEEEEEEEEETTEEEEEEEEECTTTTGGGTSCBCCSTTSC
T ss_pred cceEEecCCcEEEEEcCCCcCCCCEEEEEEEEEEEECCCCeEEEEeeEEECCceEEEEEEcCcccCcCEEEEeCCccccc
Confidence 67788899999999999999999 89999999999999999999999999899999999999999999999999999999
Q ss_pred eEEEEEEEeCCCCeEEecCCcccee----ecCCeEEEEEEeCCCCcceEEEEEEeeeeEeeecccCCeEEEEEEcCCchh
Q 003010 156 ATFKITLDVPSELVALSNMPVIDEK----VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKAN 231 (858)
Q Consensus 156 a~f~l~i~~p~~~~a~Sn~~~~~~~----~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~ 231 (858)
|+|+|+|++|++|+|+|||++.++. .++++++++|++|||||||++||+||+|..++..+.+|+++++|++|+..+
T Consensus 165 Atf~i~i~~p~~~~alSN~~~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~g~~~~v~~~p~~~~ 244 (909)
T 4fke_A 165 ATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIA 244 (909)
T ss_dssp BEEEEEEEEETTSEEEESSCBSSSCEECTTCTTEEEEEBCCCCSBCGGGCCEEEESCEEEEEECTTSCEEEEEECHHHHH
T ss_pred eEEEEEEEECCCCEEEcCCcccccccceecCCCeEEEEEecCCCccceeeEEEecceEEEeeccCCCcEEEEEEecchhh
Confidence 9999999999999999999988653 246799999999999999999999999999887778899999999998654
Q ss_pred --hHHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCCccccccccceeecccccccCCCChHHHHHHHHHHHHHHH
Q 003010 232 --QGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHEL 309 (858)
Q Consensus 232 --~~~~~l~~~~~~l~~~e~~fg~~yp~~kld~v~~P~~~~gamEn~Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHEl 309 (858)
+++++++.+++++++||++||+|||++|+|+|++|+|+.||||||||++|++..+|++++.++...+++++.+||||+
T Consensus 245 ~~~~~~al~~~~~~l~~~e~~~~~~Yp~~k~d~v~vpdf~~gaMEn~glit~~e~~ll~d~~~s~~~~~~~~~~viaHEl 324 (909)
T 4fke_A 245 EGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHEL 324 (909)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHTTSCCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHCCCTTTCCHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhccCCCCCCcccEEEecCCCCcccccCcccccccceeecCcccCChHHHHHHHHHHHHHH
Confidence 467999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCccccCccchhHHhhhHHHHHHHHHHhhhCcchhHHHHHHHHHH-HHHhhhccCCCCceeee---cCCchhhhh
Q 003010 310 AHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVE---VNHTGEIDE 385 (858)
Q Consensus 310 aHqWfGnlVt~~~w~d~WLnEGfA~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~pi~~~---~~~~~~i~~ 385 (858)
|||||||+|||+||+|+|||||||+|++++++++.+|+|.++..|..... .++..|+..++||+..+ +.++.+++.
T Consensus 325 AHqWFGnlVT~~~W~dlWLnEGFAty~e~~~~~~~~~~~~~~~~f~~~~~~~~~~~d~~~~~~pi~~~~~~v~~~~~i~~ 404 (909)
T 4fke_A 325 AHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPAQISE 404 (909)
T ss_dssp HTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTSCGGGGHHHHTHHHHHHHHTSTTCCCSCCCGGGCCSHHHHHT
T ss_pred HhhhhcCeecccccCcceeehHHHHHHHHHHHHhccccccHHHhhhhhHHHHHHHHhhhcccCCccccccccCChhhHHh
Confidence 99999999999999999999999999999999999999999888877665 77899999999999875 678889999
Q ss_pred ccccccccchhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCC--------CHHHHHHHhhcCCCc
Q 003010 386 IFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGE--------PVNKLMNSWTKQKGY 457 (858)
Q Consensus 386 ~f~~i~Y~Kga~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg~--------~l~~~~~~W~~~~G~ 457 (858)
.|+.++|.||++|||||+..||++.|++|||.|+++|+|++++++|||++|++++|. +|++||++|+.|+||
T Consensus 405 ~fd~i~Y~KGa~vL~mL~~~lG~e~F~~gl~~Yl~~~~~~na~~~Dl~~~l~~~s~~~~~~~~~~~v~~~~~~W~~q~G~ 484 (909)
T 4fke_A 405 MFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGF 484 (909)
T ss_dssp TSSHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHHTCSSCCCSSCHHHHHHHHHSSCSC
T ss_pred hhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcccccccchhHHhHhhCccccCCC
Confidence 999999999999999999999999999999999999999999999999999999864 599999999999999
Q ss_pred ceEEEEEeCCEEEEEEEeecCCCCC-------CCCeeEEEEEEEeCccceeeeEEeec-ceeEEEecccccccccCCCCC
Q 003010 458 PVISVKVKEEKLELEQSQFLSSGSP-------GDGQWIVPITLCCGSYDVCKNFLLYN-KSDSFDIKELLGCSISKEGDN 529 (858)
Q Consensus 458 P~l~v~~~~~~~~l~Q~rf~~~~~~-------~~~~w~iPl~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~ 529 (858)
|+|+|+++.+. ++|+||+..... .+..|+|||++.+.+.... ..++.. ......+.. ...+
T Consensus 485 Pvv~V~~~~~~--~~q~~~~~~~~~~~~~~~~~~~~w~IPl~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~- 553 (909)
T 4fke_A 485 PVITVDTKTGN--ISQKHFLLDSESNVTRSSAFDYLWIVPISSIKNGVMQD-HYWLRDVSQAQNDLFK-------TASD- 553 (909)
T ss_dssp EEEEEETTTTE--EEEEECCSCTTCCCCSCCTTTTCCCEEECEEETTEECC-CEEECSCSEEECGGGC-------CCTT-
T ss_pred cEEEEEeccCc--EEEEEEEeccCCCCCCCCCCCceEEEEEEEEeCCCccc-eEEeeccccceeeecc-------CCCC-
Confidence 99999887765 678888765421 1237999999987654322 233332 222222221 2234
Q ss_pred CceEEEcCCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHhccCCHHHHHHHHHhcccCCcHHHHH
Q 003010 530 GGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLS 607 (858)
Q Consensus 530 ~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~~--~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~ 607 (858)
+||++|.+++||||||||+++|.+|+.+|..+ .|++.||+|||+|+|+||++|.++++.+|+++.||++|++|+||.
T Consensus 554 -~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~ag~~~~~~~l~l~~~l~~E~~y~~w~ 632 (909)
T 4fke_A 554 -DWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYDSFNLATAHMVPVTLALDNTLFLNGEKEYMPWQ 632 (909)
T ss_dssp -CCEEESGGGCSSCEEEECHHHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHTTGGGGGCCSHHHHH
T ss_pred -CeEEECCCceEEEEEecCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHccCccHHHHH
Confidence 89999999999999999999999999999854 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccChhHHHHHHHHHHHHhHHHHHhcCCccC----CCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 003010 608 NLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSK----PGESHLDALLRGEIFTALALLGHKETLNEASK 683 (858)
Q Consensus 608 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~----~~~~~~~~~lr~~i~~~ac~~g~~~c~~~A~~ 683 (858)
++++.|..|..++.. ++.+..|++|+++++.++++++||... .++++.++.+|..++.+||..|+++|+++|++
T Consensus 633 ~~~~~l~~l~~~~~~--~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lr~~~l~~ac~~g~~~c~~~a~~ 710 (909)
T 4fke_A 633 AALSSLSYFSLMFDR--SEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNGLPQCENLAKT 710 (909)
T ss_dssp HHHHHHHHHHHHHTT--STTHHHHHHHHHHHHHHHHHHHHHHTTTTTSCCSSHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 999999999999876 457899999999999999999976432 35788899999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhcC
Q 003010 684 RFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSS 763 (858)
Q Consensus 684 ~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~~ll~~~L~~~l~~ 763 (858)
+|++|+++++.++||||+|.+|||+ ++++|++++|+++|++|+++++++||..+|.||||++|+++++++|++++++
T Consensus 711 ~f~~~~~~~~~~~i~~dlr~~vy~~---~~~~g~~~~~~~l~~~~~~~~~~~ek~~ll~aL~~~~d~~~l~~~L~~~l~~ 787 (909)
T 4fke_A 711 LFDQWMSDPENNPIHPNLRSTIYCN---AIAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTLNP 787 (909)
T ss_dssp HHHHHHTCTTSCCSCTTTHHHHHHH---HHHHSCHHHHHHHHHHHHHCCSHHHHHHHHHHHTTCCCHHHHHHHHHHTTCT
T ss_pred HHHHHhhCCCCCcCCHHHHHHHHHH---HHHhCCHHHHHHHHHHHHccCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhCC
Confidence 9999998876788999999988876 5568999999999999999999999999999999999999999999999987
Q ss_pred -ccccccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchhHHHHHhccccCCHHHHHHHHhhhc--------
Q 003010 764 -EVRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPVCCLHLSNYVFRFST-------- 830 (858)
Q Consensus 764 -~ir~qd~~~~~~-vs~~--g~~~aw~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~~~~v~~F~~-------- 830 (858)
.||+||+..++. ++.| |++++|+|+++||+.|.++|+++ +.++++|..+++.|+|+++++++++||+
T Consensus 788 ~~ir~qd~~~~~~~v~~n~~g~~~~~~f~~~n~~~l~~~~~~~~~~~~~~i~~~~~~~~t~~~~~~~~~f~~~~~~~~~~ 867 (909)
T 4fke_A 788 DLIRKQDATSTINSIASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDVGFG 867 (909)
T ss_dssp TTSCGGGHHHHHHHHHHSTTHHHHHHHHHHHHCTTTTTSSSSCCCCHHHHHHHHHTTCCSHHHHHHHHHHHTTCSSSCCG
T ss_pred CCCchhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHhhCCccccc
Confidence 599999999999 8776 99999999999999999999865 6789999999999999999999999997
Q ss_pred -------------cccccccccccchhHHHHHhhh
Q 003010 831 -------------LTYVHFKCFPLDPFFVSFCCLA 852 (858)
Q Consensus 831 -------------~~~i~w~~~~~~~~~~~~~~~~ 852 (858)
..||+|.+++.+.+.+|+++-.
T Consensus 868 ~~~~~~~~~le~i~~n~~w~~~~~~~i~~wL~~n~ 902 (909)
T 4fke_A 868 SGTRALEQALEKTKANIKWVKENKEVVLNWFIEHS 902 (909)
T ss_dssp GGTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhcC
Confidence 5699999999999999998754
No 4
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=100.00 E-value=9.4e-142 Score=1282.37 Aligned_cols=742 Identities=32% Similarity=0.559 Sum_probs=675.5
Q ss_pred ceeeEEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEeCCceEeEEEEEeccCCCCccccCeeEEEecCCeEEEEEeC
Q 003010 14 AVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVLEFA 93 (858)
Q Consensus 14 v~P~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~Lh~~~l~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~ 93 (858)
|+|.||+|+|++++++.+|+|+|+| + ++++.|+||+++|+|.++++++ .+..+.++. +.++|.++
T Consensus 1 v~p~hY~l~l~~~~~~~~f~G~v~I--~--~~~~~i~L~~~~l~I~~v~~~g---------~~~~~~~~~--~~l~i~~~ 65 (780)
T 1z5h_A 1 MEVEKYDLTLDFDIQKRTFNGTETI--T--ADAGDIVLDAVGLQINWMKVNG---------RDTAFTYDG--QTVRAPGD 65 (780)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEEE--E--ECSSCEEEECSSCEEEEEEETT---------EECCCEECS--SEEEECCC
T ss_pred CEEEEEEEEEEEECCCCEEEEEEEE--E--cCCCEEEEEccCCEEEEEEEec---------eeccEEEEC--CEEEEEeC
Confidence 6899999999999999999999999 4 6789999999999999998853 123344444 37777765
Q ss_pred CCcCCceEEEEEEEEeeeCCCCcceEEeeeccCCeeeecccccCCcCCccceeccCCCCCCeeEEEEEEEeCCCCeEEec
Q 003010 94 ETLPTGMGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSN 173 (858)
Q Consensus 94 ~~L~~g~~~l~i~y~g~l~~~~~G~y~~~y~~~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~ka~f~l~i~~p~~~~a~Sn 173 (858)
+|.|+|+|.|+|.+++++.|||++.|. +++++|||||++||+||||||||.+||+|+|+|++|++|+|+||
T Consensus 66 ----~g~~~l~i~y~g~~~~~~~G~y~~~y~-----~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~iti~~p~~~~~lSN 136 (780)
T 1z5h_A 66 ----SQPQKIEISFAGKVSDSLSGIYYAGRE-----NGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISN 136 (780)
T ss_dssp ----SSSEEEEEEEEEECBSSSSEEEEESST-----TCEEEEECTTTCGGGTSCBCCCTTSCBEEEEEEEECTTCEEEES
T ss_pred ----CccEEEEEEEEEEeCCCcccceecccc-----ceEEEEccccCChhheeecCCCcccccEEEEEEEECCCCEEEeC
Confidence 388999999999999999999999876 67889999999999999999999999999999999999999999
Q ss_pred CCccceeecCCeEEEEEEeCCCCcceEEEEEEeeeeEeeecccCCeEEEEEEcCCchhhHHHHHHHHHHHHHHHHHHhCC
Q 003010 174 MPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAV 253 (858)
Q Consensus 174 ~~~~~~~~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~~~~~l~~~e~~fg~ 253 (858)
|++.++ ..+++++++|+.+||||+|++||++|+|...+..+. |+++++|++|+ ++++++++.+++++++|+++||+
T Consensus 137 ~~~~~~-~~~g~~~~~f~~t~~mstYL~a~~vg~f~~~~~~~~-gv~~~v~~~~~--~~~~~al~~~~~~l~~~e~~fg~ 212 (780)
T 1z5h_A 137 MPPKRI-EVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKYR-DIDLILASLKD--IRSKYPLDMARKSVEFYENYFGI 212 (780)
T ss_dssp SCEEEE-EESSSEEEEECCCCSBCGGGCCEEEECCEEEEEEET-TEEEEEEESSC--CCCSHHHHHHHHHHHHHHHHHSS
T ss_pred Cccccc-cCCCceEEEEecCCcccceEEEEEEeccEEEeeccC-CeeEEEEEccc--hhHHHHHHHHHHHHHHHHHHhCC
Confidence 998765 556788999999999999999999999999886555 89999999999 67799999999999999999999
Q ss_pred CCCCCCcceeecCCCCCccccccccceeecccccccCCCChHHHHHHHHHHHHHHHHHHHhcCccccCccchhHHhhhHH
Q 003010 254 PYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFA 333 (858)
Q Consensus 254 ~yp~~kld~v~~P~~~~gamEn~Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~~~w~d~WLnEGfA 333 (858)
|||++|+|+|++|+|+.|||||||+++|+|..++++ +.++...++.++.+||||+|||||||+|||+||+|+|||||||
T Consensus 213 ~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~-~~~~~~~~~~~~~viaHElaHqWfGnlVT~~~W~dlWLnEGfA 291 (780)
T 1z5h_A 213 PYALPKMHLISVPEFGAGAMENWGAITFREIYMDIA-ENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFA 291 (780)
T ss_dssp CCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHSCC-TTSCHHHHHHHHHHHHHHHHHTTBTTTEEESSGGGHHHHHHHH
T ss_pred CCCCccCCEEEcCCCCCCcccccCeeEeecceEeec-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCcccccccHHHH
Confidence 999999999999999999999999999999999999 6677888889999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhCcchhHHHHHHHHHH-HHHhhhccCCCCceeeecCCchhhhhccccccccchhHHHHHHHHhhCHHHHH
Q 003010 334 TWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQ 412 (858)
Q Consensus 334 ~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~pi~~~~~~~~~i~~~f~~i~Y~Kga~vl~mL~~~lG~~~F~ 412 (858)
+|++++++++.+|+|.++.+|..... .++..|+..++||+..++.++.+++..|+.++|.||++|||||+..||++.|+
T Consensus 292 ~y~~~~~~~~~~~~~~~~~~f~~~~~~~al~~D~~~~~~pi~~~v~~~~~~~~~fd~i~Y~KGa~vl~mL~~~lG~e~F~ 371 (780)
T 1z5h_A 292 TFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAGYEEFR 371 (780)
T ss_dssp HHHHHHHHHHHCTTTCHHHHHHHHTHHHHHHHTTSTTCCCSCCCCCSSCCTTTTSCHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCceecCCCHHHHHHhcchhhhhhHHHHHHHHHHHhCHHHHH
Confidence 99999999999999998888886655 67888999999999998889999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHHHHHhhcCCCcceEEEEEeCCEEEEEEEeecCCCCCCCCeeEEEEE
Q 003010 413 RSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPIT 492 (858)
Q Consensus 413 ~~l~~yl~~~~~~~~~~~df~~~l~~~sg~~l~~~~~~W~~~~G~P~l~v~~~~~~~~l~Q~rf~~~~~~~~~~w~iPl~ 492 (858)
++|+.|+++|+|++++++|||+++++++|.|+++||++|++|+|+|+++|++++++++|+|+||..++ ..+..|+|||+
T Consensus 372 ~~l~~yl~~~~~~~~t~~Dl~~~l~~~sg~dl~~~~~~W~~~~G~P~l~v~~~~~~~~l~Q~~f~~~~-~~~~~w~iPi~ 450 (780)
T 1z5h_A 372 KGISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKLKRNGRKITMYQTRFLLNG-EEEGRWPVPVN 450 (780)
T ss_dssp HHHHHHHHHHTTEEECHHHHHHHHHHHHCSCHHHHHHHHHHSCSCEEEEEEESSSEEEEEEEECCSSC-CEECCCCEEEE
T ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHHhCCCHHHHHHHHHhCCCCceEEEEecCcEEEEEEEEecCCC-CCCceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999998889999999998765 33458999999
Q ss_pred EEeCccceeeeEEeecceeEEEecccccccccCCCCCCceEEEcCCceeEEEEEcCHHHHHHHHHHHHhcCCChhhHHHH
Q 003010 493 LCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGI 572 (858)
Q Consensus 493 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~~~i~~~~Ra~l 572 (858)
+ +.++. ...+ +..+ ++.++. + +||++|.++.||||||||+++|+.|+++| ..|++.+|+||
T Consensus 451 ~-~~~~~-~~~~-l~~~--~~~~~~----------~--~~i~~N~~~~gyyrv~Yd~~~~~~l~~~l--~~i~~~~Ra~l 511 (780)
T 1z5h_A 451 I-KKKDG-VERI-LLED--EASIEA----------D--GLIKINADSAGFYRVLYDDATFSDVMGHY--RDLSPLDRIGL 511 (780)
T ss_dssp E-EETTE-EEEE-EECS--SEEEEC----------T--TEEEESGGGCSSSEEECCHHHHHHHHHTG--GGCCHHHHHHH
T ss_pred E-cCCCc-eeee-ccCc--eEEccC----------C--ceEEEeCCCCEEEEEECCHHHHHHHHHHh--ccCCHHHHHHH
Confidence 9 44332 2334 5543 344532 2 69999999999999999999999999988 46899999999
Q ss_pred HHHHHHHHHhccCCHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHhHHHHHhcCCccCC
Q 003010 573 LDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKP 652 (858)
Q Consensus 573 i~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~~ 652 (858)
|+|+|+||++|.++++.+++|++||++|++|+||.++++.|..+..+ . +.|+.|+++++.++++++| ..
T Consensus 512 i~D~~~l~~~g~~~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~~~~~--~------~~~~~~~~~l~~~~~~~l~--~~- 580 (780)
T 1z5h_A 512 VDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITAIVGQMEYLRML--T------HAFDDDARAFCRSRMQFLT--GK- 580 (780)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHGGGTTCCCHHHHHHHHHHHHHHHTT--C------STTHHHHHHHHHHHHHHHT--TC-
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHhc--h------HHHHHHHHHHHHHHHHHcC--CC-
Confidence 99999999999999999999999999999999999999999888765 2 2488999999999999999 22
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCC
Q 003010 653 GESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETD 732 (858)
Q Consensus 653 ~~~~~~~~lr~~i~~~ac~~g~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~ 732 (858)
+++.+..+|..++++||..|+++|++ |+++|++| +.||||+|.+|||++ +++|++ |++++++|++++
T Consensus 581 -~~~~~~~~r~~~~~~a~~~~~~~~~~-a~~~f~~~------~~i~~~lr~~v~~~~---~~~g~~--~~~l~~~~~~~~ 647 (780)
T 1z5h_A 581 -QDENLKIALGRVSRLYVMVDESYAEE-MSKLFKDF------DSAEPEMRSSIATAY---ALVTGD--LKGLLEKFRSVD 647 (780)
T ss_dssp -CCHHHHHHHHHHHHHHHHHCHHHHHH-HHTTGGGG------GGSCHHHHHHHHHHH---HHHTCC--HHHHHHHHHSCC
T ss_pred -CChHHHHHHHHHHHHHHhcCCHHHHH-HHHHHHhc------CCCCHHHHHHHHHHH---HHcCcH--HHHHHHHHhcCC
Confidence 78899999999999999999999999 99999998 249999999888765 457776 999999999999
Q ss_pred CHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCccccccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCCcchhHHH
Q 003010 733 LSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSGFLITRFI 809 (858)
Q Consensus 733 ~~~ek~~ll~aL~ct~d~~ll~~~L~~~l~~~ir~qd~~~~~~-vs~~--g~~~aw~fl~~n~~~i~~~~~~~~~l~~~i 809 (858)
+++||..++.||||++|+++++++|++++++.+|.||...++. ++.+ |++++|+|+++||+.|.+++++.+.++++|
T Consensus 648 ~~~~~~~~l~al~~~~~~~~~~~~l~~~~~~~i~~qd~~~~~~~~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~~~~i 727 (780)
T 1z5h_A 648 RDEDRVRIISAFGKLKSNTDLSTVYGMVEKTEIKKQDMISFFSSALETLPGREFIFANLDRIIRLVIRYFTGNRTASRTV 727 (780)
T ss_dssp SHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTSHHHHHHHHHTHHHHHHHHHHHHCSSSHHHHHH
T ss_pred CHHHHHHHHHHhccCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 9999999999999999999999999999987799999999988 7655 999999999999999999998667789999
Q ss_pred HHhccccCCHHHHHHHHhhhc
Q 003010 810 SSIVSPVCCLHLSNYVFRFST 830 (858)
Q Consensus 810 ~~~~~~~~t~~~~~~v~~F~~ 830 (858)
..+ +.|+|++ ++++++||+
T Consensus 728 ~~~-~~~~t~~-~~~~~~f~~ 746 (780)
T 1z5h_A 728 EMM-IPVIGLD-HPDAEDIVR 746 (780)
T ss_dssp HHH-HHHHHHH-CTTHHHHHH
T ss_pred Hhh-hccCCHH-HHHHHHHHc
Confidence 999 9999999 999999997
No 5
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=100.00 E-value=1.1e-98 Score=910.37 Aligned_cols=721 Identities=18% Similarity=0.236 Sum_probs=578.9
Q ss_pred CCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEeCCceEeEEEEEeccCCCCccccCeeEEEecCC
Q 003010 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEAD 85 (858)
Q Consensus 6 ~~~rLp~~v~P~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~Lh~~~l~I~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (858)
.++|+|...+| ||+|++++++++.+++|+++|++. .+++.|+||+.+ +|.+|++++. ... +..++
T Consensus 9 ~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~--~~~~~i~Ld~~~-~I~sv~v~g~---------~~~--~~~~~ 73 (867)
T 2gtq_A 9 KDYQTPAYHIL-KTDLHFDINEPQTVVKSRLTVEPQ--RVGEPLVLDGSA-KLLSVKINGA---------AAD--YVLEG 73 (867)
T ss_dssp GGCCCCSEEEE-EEEEEEEECSSCEEEEEEEEEEES--STTSCEEEECCS-EEEEEEETTE---------ECC--CEEET
T ss_pred cccCCCCCcee-EEEEEEEEECCcEEEEEEEEEEEe--CCCCEEEEecCC-CEEEEEECCe---------ecc--eEeeC
Confidence 56888887777 899999999988888888877743 447899999999 9999998541 122 33345
Q ss_pred eEEEEEeCCCcCCceEEEEEEEEeee--CCCCcceEEeeeccCCeeeecccccCCcCCccceeccCCCCCCeeEEEEEEE
Q 003010 86 EILVLEFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLD 163 (858)
Q Consensus 86 ~~l~i~l~~~L~~g~~~l~i~y~g~l--~~~~~G~y~~~y~~~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~ka~f~l~i~ 163 (858)
+.++|. +|++|.++|+|.|++.. ++.+.|+|++. .+++|||||.+||+||||||+|++||+|+++|+
T Consensus 74 ~~L~I~---~lp~g~~~l~I~y~~~p~~~~~~~Gly~s~--------~~~~Tq~ep~~AR~~fPc~DeP~~katf~itIt 142 (867)
T 2gtq_A 74 ETLTIA---GVPSERFTVEVETEILPAENKSLMGLYASG--------GNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIV 142 (867)
T ss_dssp TEEEES---CCCSSCEEEEEEEEECGGGCCSCSEEEEET--------TEEEEECTTTTGGGTSCBCCSTTCCBEEEEEEE
T ss_pred CEEEEE---ecCCCcEEEEEEEEEeccCCCCCcEEEEEC--------CEEEEeeccCCCceeeccCCCCCcceEEEEEEE
Confidence 678775 45568999999998854 45678999874 267899999999999999999999999999999
Q ss_pred eCCC-C-eEEecCCcccee-ecCCeEEEEEEeCCCCcceEEEEEEeeeeEeeec--cc--CCeEEEEEEcCCchhhHHHH
Q 003010 164 VPSE-L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--TS--DGIKVRVYCQVGKANQGKFA 236 (858)
Q Consensus 164 ~p~~-~-~a~Sn~~~~~~~-~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~--~~--~g~~v~v~~~~~~~~~~~~~ 236 (858)
+|++ | +++|||+++++. ..+++++++|+.++|||+|++||++|+|..++.. +. +++++++|++|+..+.++++
T Consensus 143 ~p~~~y~~~lSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~a 222 (867)
T 2gtq_A 143 ADKKRYPVLLSNGNKIDGGEFSDGRHWVKWEDPFSKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPKVGFA 222 (867)
T ss_dssp EETTTCCEEEESSEEEEEEECTTSEEEEEEECCSCBCGGGCCEEEECCEEEEEEEECTTSCEEEEEEEECTTTGGGCHHH
T ss_pred EccccceEEEeCCccccceeecCCeEEEEEEeCCCccccceeEEEecceEeeeceeccCCCceEEEEEeccccHHHHHHH
Confidence 9997 6 999999988764 3677889999999999999999999999988752 22 35899999999999899999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCCccccccccceeecccccccCCCChHHHHHHHHHHHHHHHHHHHhcC
Q 003010 237 LNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGN 316 (858)
Q Consensus 237 l~~~~~~l~~~e~~fg~~yp~~kld~v~~P~~~~gamEn~Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn 316 (858)
++.+++++++||++||+|||++|+++|++|+|..||||||||++|++..++++++.++...++.+..+||||+|||||||
T Consensus 223 l~~~~~~l~~~e~~fG~pYP~~k~d~Vavpdf~~GaMEn~glitf~e~~ll~~~~~~~~~~~~~i~~vIaHElAHqWfGn 302 (867)
T 2gtq_A 223 VESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWTGN 302 (867)
T ss_dssp HHHHHHHHHHHHHHHCCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCccccccCCceeecccccccCcccCcHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999887777788899999999999999999
Q ss_pred ccccCccchhHHhhhHHHHHHHHHHhhhCcch-hHHHHHHHHHHHHHhhhccCCCCceeeecCCchhhhhccccccccch
Q 003010 317 LVTMEWWTHLWLNEGFATWVSYLAADSLFPEW-KIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKG 395 (858)
Q Consensus 317 lVt~~~w~d~WLnEGfA~y~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~pi~~~~~~~~~i~~~f~~i~Y~Kg 395 (858)
+|||+||+++|||||||+|++..+.+...+.. ............++..|+...+||+.. .++.+++..|+.++|.||
T Consensus 303 lVT~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~~~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~Y~KG 380 (867)
T 2gtq_A 303 RVTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIENIRLLRQHQFPEDAGPTAHPVRP--ASYEEMNNFYTMTVYEKG 380 (867)
T ss_dssp TBEESSGGGHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHSTTCCCSSC--SEESCGGGGCSHHHHHHH
T ss_pred EEEecccccccchHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhhhhccCccCCCCcC--CChhhhhhhccchhhhHH
Confidence 99999999999999999999988887776532 111111111113466788888999864 345677889999999999
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHHHHHhhcCCCcceEEEEEe--CC--EEEE
Q 003010 396 ASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVK--EE--KLEL 471 (858)
Q Consensus 396 a~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg~~l~~~~~~W~~~~G~P~l~v~~~--~~--~~~l 471 (858)
++|||||+..||++.|+++|+.|+++|+|++++++|||+++++++|.|+..| ++|++|+|+|+++|++. ++ +++|
T Consensus 381 a~vl~mL~~~lG~e~F~~glr~Yl~~~~~~~~t~~Df~~~l~~~sg~dl~~f-~~W~~q~G~P~l~v~~~~~~~~~~l~l 459 (867)
T 2gtq_A 381 AEVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQF-ALWYSQAGTPVLEAEGRLKNNIFELTV 459 (867)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHTCCCGGG-GHHHHCCSCCEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCCHHHH-HHHhcCCCCceEEEEEEecCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999999996 79999999999999875 44 4889
Q ss_pred EEEeecCCCCCCCCeeEEEEEEEeCc--cce-----------eeeEEeecceeEEEecccccccccCCCCCCceEEEcCC
Q 003010 472 EQSQFLSSGSPGDGQWIVPITLCCGS--YDV-----------CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVN 538 (858)
Q Consensus 472 ~Q~rf~~~~~~~~~~w~iPl~~~~~~--~~~-----------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~ 538 (858)
+|+++...+..+...|+|||++...+ +.. ...++++.++.++.++.. ... .|+.+|.+
T Consensus 460 ~Q~~~~~~~~~~~~~~~iPi~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~--p~~~l~r~ 530 (867)
T 2gtq_A 460 KQTVPPTPDMTDKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLLTEAEQTFLLEGV-------TEA--VVPSLLRG 530 (867)
T ss_dssp EEECCCBTTBSCCCCCCEEEEEEEECTTCCBCCEECSSCEESCEEEEECSSEEEEEEBCC-------CSC--CEEEESTT
T ss_pred EEecCCCCCCCCCceEEEEEEEEEEcCCCcccccccccccccceEEEEcCCceEEEEeCC-------CCC--CceEecCC
Confidence 99998654444455899999997532 221 123567888888888742 123 68999999
Q ss_pred ceeEEEEEcCHHHHHHHHHHHHhcCCChhhHHHH---HHHHHHH-----HHhccC-C-HHHHHHHHHhcc-cCC-cHHHH
Q 003010 539 QTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGI---LDDHFAL-----CMARQQ-T-LTSLLTLMASYS-EET-EYTVL 606 (858)
Q Consensus 539 ~~gyyRV~Yd~~~w~~l~~~l~~~~i~~~~Ra~l---i~D~~~l-----a~~g~l-~-~~~~l~l~~~l~-~E~-~~~~w 606 (858)
..+++||+|+-..+.. ...+..+. ++.+|.++ +.|...+ +.+|.. + ++.++++++++. +|. ++.+|
T Consensus 531 fs~~~~l~~~~~~~~l-~~l~~~~~-d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 608 (867)
T 2gtq_A 531 FSAPVHLNYPYSDDDL-LLLLAHDS-DAFTRWEAAQTLYRRAVAANLATLSDGVELPKHEKLLAAVEKVISDDLLDNAFK 608 (867)
T ss_dssp CCSSCEEECCCCHHHH-HHHHHHCS-CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSSCHHHH
T ss_pred CCccEEEECCCCHHHH-HHHHhhCC-ChhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHhcCcCCCHHHH
Confidence 9999999977555432 23333322 47888766 8888888 667766 7 889999988865 777 99999
Q ss_pred HHHHH--HHHHHHHHHhccChhH----HHHHHH-HHHHH---hHHHHHhc-----C-CccCCCCCHHHHHHHHHHHHHHH
Q 003010 607 SNLIT--ISYKIGRIAADARPEL----LDYLKQ-FFISL---FQNSAEKL-----G-WDSKPGESHLDALLRGEIFTALA 670 (858)
Q Consensus 607 ~~~~~--~l~~l~~~~~~~~~~~----~~~~~~-~~~~l---~~~~~~~l-----g-~~~~~~~~~~~~~lr~~i~~~ac 670 (858)
..++. .+..|...+..-+++. .+.++. +...+ +.++|+++ | |+..+ ++...+.||..+++++|
T Consensus 609 a~~l~lp~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~lr~~~l~~l~ 687 (867)
T 2gtq_A 609 ALLLGVPSEAELWDGAENIDPLRYHQAREALLDTLAVHFLPKWHELNRQAAKQENQSYEYSP-EAAGWRTLRNVCRAFVL 687 (867)
T ss_dssp HHHTCCCCHHHHTTTCSSBCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCSCCH-HHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCh-HHHHHHHHHHHHHHHHH
Confidence 99998 5667766432212333 334444 54555 88889877 7 87654 77788999999999999
Q ss_pred hcCCHHHHHHHHHHHHHhhcCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCH
Q 003010 671 LLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDV 750 (858)
Q Consensus 671 ~~g~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~ 750 (858)
..| ++|++.|.++|.+...+ .+..++.|+ +++. ....++++.++.++++|+++....+|..++. ||+++|
T Consensus 688 ~~~-~~~~~~a~~~~~~~a~n--mt~~~~al~--~l~~---~~~~~~~~~~~~f~~~~~~~~~~~~k~~~~~--a~~~~~ 757 (867)
T 2gtq_A 688 RAD-PAHIETVAEKYGEMAQN--MTHEWGILS--AVNG---NESDTRNRLLAQFADKFSDDALVMDKYFALV--GSSRRS 757 (867)
T ss_dssp HHC-TTHHHHHHHTHHHHCSS--HHHHHHHHH--HHTT---CCSHHHHHHHHHHHHHTTTCHHHHHHHHHHH--HHCCST
T ss_pred hcC-ccHHHHHHHHHHHhCCC--HhHHHHHHH--HHHh---cCcccHHHHHHHHHHHHcCCchHHHHHHHHH--hcCCCh
Confidence 999 99999999999966432 234556666 3332 2234567789999999999888888888887 688999
Q ss_pred HHHHHHHHHHhcC--cc-ccccceeeee-ec
Q 003010 751 NIVLEVLNFLLSS--EV-RSQDAVYGLA-VS 777 (858)
Q Consensus 751 ~ll~~~L~~~l~~--~i-r~qd~~~~~~-vs 777 (858)
.++++++.++.++ ++ +++++..++. ++
T Consensus 758 ~~~~~v~~l~~~~~f~~~npn~~r~l~~~~~ 788 (867)
T 2gtq_A 758 DTLQQVRTALQHPKFSLENPNKARSLIGSFS 788 (867)
T ss_dssp THHHHHHHHTTSTTCCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCcCCCcCCchHHHHHHHHHh
Confidence 9999999999987 33 4555555555 43
No 6
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=100.00 E-value=1.9e-89 Score=820.30 Aligned_cols=705 Identities=20% Similarity=0.250 Sum_probs=510.8
Q ss_pred CCCceeeEEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEeCCceEeEEEEEeccCCCCccccCeeEEEecCCeEEEE
Q 003010 11 PKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVL 90 (858)
Q Consensus 11 p~~v~P~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~Lh~~~l~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 90 (858)
|..+...||+|++++++++..++|+++|+++..++++.|+||+.+|+|.+|.+++. .+.. ...+..+++.|+|
T Consensus 11 ~~~~~V~h~~L~l~ld~~~~~v~G~~~i~~~~~~~~~~l~LD~~~L~I~sV~vnG~------~l~~-~~~~~~~~~~L~I 83 (889)
T 3ebh_A 11 PSGFIINQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLKINEISINNK------KLVE-GEEYTYDNEFLTI 83 (889)
T ss_dssp CCSEEEEEEEEEEEECSSCEEEEEEEEEEECTTCCSCCEEEECCSCEEEEEEETTE------ECCB-TTTEEECSSEEEE
T ss_pred CCCcEEEEEEEEEEEeCCCeEEEEEEEEEEecCCCCceEEEECCCCEEEEEEECCE------EcCc-ccceEecCCEEEE
Confidence 55688899999999999999999999999887666789999999999999998642 1110 0024445678999
Q ss_pred EeCCCcCCceEEEEEEEEeee--CCCCcceEEeeeccCCeeeecccccCCcCCccceeccCCCCCCeeEEEEEEEeCCC-
Q 003010 91 EFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSE- 167 (858)
Q Consensus 91 ~l~~~L~~g~~~l~i~y~g~l--~~~~~G~y~~~y~~~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~ka~f~l~i~~p~~- 167 (858)
.++. ++.+.++|+|.|++.. ++.+.|+|++. .+++|||||++||+||||||+|++||+|+++|++|++
T Consensus 84 ~l~~-l~~~~~~l~I~y~~~p~~~~~l~Gly~s~--------~~~~TQ~Ep~~AR~~fPC~DeP~~KAtf~itIt~p~~~ 154 (889)
T 3ebh_A 84 FSKF-VPKSKFAFSSEVIIHPETNYALTGLYKSK--------NIIVSQCEATGFRRITFFIDRPDMMAKYDVTVTADKEK 154 (889)
T ss_dssp CGGG-SCSSSEEEEEEEEECGGGCTTCSEEEEET--------TEEEEECTTTTGGGTSCBCCSTTCCEEEEEEEEEETTT
T ss_pred ecCC-CCCCcEEEEEEEEecCccCCCceeeEEEC--------CeEEEcccCCCCCEEEEEcCCCCcceEEEEEEEEcccc
Confidence 8765 6546999999999975 45678999874 2678999999999999999999999999999999997
Q ss_pred C-eEEecCCcccee-ecCCeEEEEEEeCCCCcceEEEEEEeeeeEeeec-----ccCCeEEEEEEcCCchhhHHHHHHHH
Q 003010 168 L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH-----TSDGIKVRVYCQVGKANQGKFALNVA 240 (858)
Q Consensus 168 ~-~a~Sn~~~~~~~-~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~-----~~~g~~v~v~~~~~~~~~~~~~l~~~ 240 (858)
| +++|||+++++. ..+++++++|..++|||+|++||+||+|..++.. ..+++++++|++|+..+.++++++.+
T Consensus 155 ~~valSNg~l~~~~~~~~g~~~~~f~~t~pmstYLvA~~vG~f~~~~~~~~t~~~G~~v~l~vy~~p~~~~~~~~al~~~ 234 (889)
T 3ebh_A 155 YPVLLSNGDKVNEFEIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECL 234 (889)
T ss_dssp CCEEEESSEEEEEEEETTTEEEEEEEEEEEECGGGCCEEEECEEEEEEEEECSSSCCEEEEEEEEEGGGGGGGHHHHHHH
T ss_pred CeEEEccCccccceecCCCeEEEEEecCCccchhheeeEEecceEEeeeeeecCCCCceEEEEEeccCcHHHHHHHHHHH
Confidence 8 579999988764 4678999999999999999999999999988743 22348899999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCcceeecCCCCCccccccccceeecccccccCCCChHHHHHHHHHHHHHHHHHHHhcCcccc
Q 003010 241 VKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTM 320 (858)
Q Consensus 241 ~~~l~~~e~~fg~~yp~~kld~v~~P~~~~gamEn~Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~ 320 (858)
++++++||++||+|||++|+|+|++|+|..||||||||++|++..+|+++..++...++.+..+||||+|||||||+|||
T Consensus 235 ~~~l~~~e~~fG~pYP~~kyd~VavPdF~~GaMEN~GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHQWFGNlVT~ 314 (889)
T 3ebh_A 235 KKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTL 314 (889)
T ss_dssp HHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTSCTHHHHHHHHHHHHHHHTTTBTTTBEE
T ss_pred HHHHHHHHHHHCCCCCCCceEEEEeccccchhhcCCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhcCeeee
Confidence 99999999999999999999999999999999999999999999999999877777888999999999999999999999
Q ss_pred CccchhHHhhhHHHHHHHHHHhhhCcch-hHHHHHHHHHHHHHhhhccCCCCceeeecCCchhhhhccccccccchhHHH
Q 003010 321 EWWTHLWLNEGFATWVSYLAADSLFPEW-KIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 399 (858)
Q Consensus 321 ~~w~d~WLnEGfA~y~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~pi~~~~~~~~~i~~~f~~i~Y~Kga~vl 399 (858)
+||+|+|||||||+|++.++.+...+.. ............++..|+...+||+.. .++.+++..|+.++|.||++||
T Consensus 315 ~~W~dlWLnEGFAtY~e~~~~~~~~~~~~~r~~~~~~lr~~~~~~D~~~~shPI~~--~~~~ei~~~f~~i~Y~KGa~vL 392 (889)
T 3ebh_A 315 RDWFQLTLKEGLTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLEDSSPLSHPIRP--ESYVSMENFYTTTVYDKGSEVM 392 (889)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHTSTTCCCSSC--SEESCGGGCCCHHHHHHHHHHH
T ss_pred cccccceeeHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhccCccCCCCCC--cchhhhhhhccchhhhHHHHHH
Confidence 9999999999999999988877665432 111111111113466788888999864 2455788899999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhcc-------CCCHHHHHHHhhcCCCcceEEEEEeC----C-
Q 003010 400 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGS-------GEPVNKLMNSWTKQKGYPVISVKVKE----E- 467 (858)
Q Consensus 400 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~s-------g~~l~~~~~~W~~~~G~P~l~v~~~~----~- 467 (858)
|||+..||++.|+++|+.|+++|+|++++++|||+++++++ |.|+.. |++|++|+|+|+|+|+++. +
T Consensus 393 rML~~~lGde~F~~gLr~Yl~~~~~~natt~Df~~ale~as~~~~~~~g~dL~~-f~~Wl~q~G~P~l~V~~~~d~~~~~ 471 (889)
T 3ebh_A 393 RMYLTILGEEYYKKGFDIYIKKNDGNTATCEDFNYAMEQAYKMKKADNSANLNQ-YLLWFSQSGTPHVSFKYNYDAEKKQ 471 (889)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSEECHHHHHHHHHHHHHHHHTCTTCCCTG-GGHHHHCCSCCEEEEEEEEETTTTE
T ss_pred HHHHHHhCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhccCCCCCCHHH-HHHHhcCCCCceEEEEEeecCCCCE
Confidence 99999999999999999999999999999999999999999 999986 6899999999999999763 2
Q ss_pred -EEEEEEEeecCCCCCCCCeeEEEEEEEeCc---cce---eeeEEeecceeEEEecccccccccCCCCCCceEEEcCCce
Q 003010 468 -KLELEQSQFLSSGSPGDGQWIVPITLCCGS---YDV---CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQT 540 (858)
Q Consensus 468 -~~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~---~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~ 540 (858)
+++|+|+++...+......|.|||++...+ +.. ...+.++.+++++.++++. .. .+..+|.+..
T Consensus 472 ~~ltl~Q~~~~~~~~~~~~~~~IPl~v~l~~~~~G~~~~~~~~l~l~~~~q~f~~~~~~-------~~--p~~sl~r~fs 542 (889)
T 3ebh_A 472 YSIHVNQYTKPDENQKEKKPLFIPISVGLINPENGKEMISQTTLELTKESDTFVFNNIA-------VK--PIPSLFRGFS 542 (889)
T ss_dssp EEEEEEEECCCCSSCSSCCCCCEEEEEEEECTTTCCBCSCCEEEEECSSEEEEEESCCC-------SC--CEEEESTTCC
T ss_pred EEEEEEEecCCCCCCCCCceEEEEEEEEEEeCCCCccccceeEEEecCCcEEEEEcCCC-------CC--CeEEEcCCCC
Confidence 688999887655555556899999997632 222 2356788889999997531 12 4778999999
Q ss_pred eEEEEEcC--HHHHHHHHHHHHhcCCChhhHHHHHHHH--------HHHHHhcc---------CCH-HHHHHHHHh-ccc
Q 003010 541 GFYRVKYD--KDLAARLGYAIEMKQLSETDRFGILDDH--------FALCMARQ---------QTL-TSLLTLMAS-YSE 599 (858)
Q Consensus 541 gyyRV~Yd--~~~w~~l~~~l~~~~i~~~~Ra~li~D~--------~~la~~g~---------l~~-~~~l~l~~~-l~~ 599 (858)
+++|++|+ .+.+..|... + -++.+|.+-..-+ ..-...|. ... ..+++.++. |..
T Consensus 543 a~v~l~~~~~~~~l~~l~~~---d-~d~~~r~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 618 (889)
T 3ebh_A 543 APVYIEDQLTDEERILLLKY---D-SDAFVRYNSCTNIYMKQILMNYNEFLKAKNEKLESFQLTPVNAQFIDAIKYLLED 618 (889)
T ss_dssp SSSEEECCCCHHHHHHHHHH---C-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCCHHHHHHHHHHHTC
T ss_pred ceEEEeCCCCHHHHHHHHhh---C-CChhHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCHHHHHHHHHHHcC
Confidence 99999977 5544433332 1 1233332211111 11011121 111 223333332 222
Q ss_pred C-CcHHHHHHHHHHH--HHHHHHHhccChhHHHH--------HHHHHHHHhHHHHHhcC------------CccCCCCCH
Q 003010 600 E-TEYTVLSNLITIS--YKIGRIAADARPELLDY--------LKQFFISLFQNSAEKLG------------WDSKPGESH 656 (858)
Q Consensus 600 E-~~~~~w~~~~~~l--~~l~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~lg------------~~~~~~~~~ 656 (858)
+ .+...-..++..- ..|...+..-+|+.... +..-+...+..+|+++. +.. ..+..
T Consensus 619 ~~~~~~~~a~~l~lp~~~~~~~~~~~~d~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 697 (889)
T 3ebh_A 619 PHADAGFKSYIVSLPQDRYIINFVSNLDTDVLADTKEYIYKQIGDKLNDVYYKMFKSLEAKADDLTYFNDESHV-DFDQM 697 (889)
T ss_dssp TTSCHHHHHHHTSCCCHHHHGGGCTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTTTCTTCC-CHHHH
T ss_pred CCCCHHHHHHHhcCCCHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCC-CHHHH
Confidence 2 2322222222110 11111111001111111 11112222233344331 111 12234
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCCCHHH
Q 003010 657 LDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQE 736 (858)
Q Consensus 657 ~~~~lr~~i~~~ac~~g~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~e 736 (858)
..+.||..+|.+.|..+.++..+.|.+.|+.- .---|-+.+.+++.. ...++..+...++++.....-+
T Consensus 698 ~~r~l~n~~l~~l~~~~~~~~~~~~~~~~~~a---------nmtd~~~al~~~~~~--~~~~~~l~~f~~~~~~~~lv~d 766 (889)
T 3ebh_A 698 NMRTLRNTLLSLLSKAQYPNILNEIIEHSKSP---------YPSNWLTSLSVSAYF--DKYFELYDKTYKLSKDDELLLQ 766 (889)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHHHHHHHHTTCS---------CHHHHHHHHHHGGGS--TTHHHHHHHHHHHHTTSHHHHH
T ss_pred HHHHHHHHHHHHHHhcCChhHHHHHHHHHhhc---------ChhHHHHHHHHHhcC--hhHHHHHHHHHHHhCCCcchhh
Confidence 45899999999999999888777777766421 223444444444332 1123345666677766655567
Q ss_pred HHHHHHHhCCCCC-HHHHHHHHHH
Q 003010 737 KTRILSSLASCPD-VNIVLEVLNF 759 (858)
Q Consensus 737 k~~ll~aL~ct~d-~~ll~~~L~~ 759 (858)
|--.+.|.+...| -+.++++++.
T Consensus 767 kwf~~qa~~~~~~~~~~v~~l~~h 790 (889)
T 3ebh_A 767 EWLKTVSRSDRKDIYEILKKLENE 790 (889)
T ss_dssp HHHHHHHTCCCTTHHHHHHHHHHH
T ss_pred HhHHHhhCCCCcCHHHHHHHHhcC
Confidence 7777777655544 3444444443
No 7
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=100.00 E-value=4.2e-89 Score=823.38 Aligned_cols=709 Identities=20% Similarity=0.247 Sum_probs=529.8
Q ss_pred CCCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEeCCceEeEEEEEeccCCCCccccCeeEEEecC
Q 003010 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEA 84 (858)
Q Consensus 5 ~~~~rLp~~v~P~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~Lh~~~l~I~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (858)
...+|+|...+| ||+|++++++++.+++|+++|++... +++.|+||+.+|+|.++.+++. ... .++.+
T Consensus 31 ~~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~~~-~~~~l~Ld~~~L~I~sV~v~G~---------~l~-~y~~~ 98 (891)
T 3b34_A 31 RHDYRAPDYQIT-DIDLTFDLDAQKTVVTAVSQAVRHGA-SDAPLRLNGEDLKLVSVHINDE---------PWT-AWKEE 98 (891)
T ss_dssp GGGCCCCSEEEE-EEEEEEECCSSCEEEEEEEEEEECSC-TTCCEEEECSSCEEEEEEETTE---------ECC-SEEEE
T ss_pred hhhCCCCCceeE-EEEEEEEEECCceEEEEEEEEEEccC-CCCEEEEECCCCEEEEEEEcCE---------Ecc-eEEee
Confidence 356778877666 89999999999999999998887655 5788999999999999998541 111 34444
Q ss_pred CeEEEEEeCCCcCCceEEEEEEEEeee--CCCCcceEEeeeccCCeeeecccccCCcCCccceeccCCCCCCeeEEEEEE
Q 003010 85 DEILVLEFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITL 162 (858)
Q Consensus 85 ~~~l~i~l~~~L~~g~~~l~i~y~g~l--~~~~~G~y~~~y~~~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~ka~f~l~i 162 (858)
++.|+|. +| |+.++|+|.|++.. ++.+.|+|++. .+++|||||++||+||||||+|++||+|+++|
T Consensus 99 ~~~L~I~---~l-p~~~~l~I~y~~~p~~~~~l~Gly~s~--------~~~~Tq~Ep~~AR~~fPc~DeP~~kAtf~itI 166 (891)
T 3b34_A 99 EGALVIS---NL-PERFTLKIINEISPAANTALEGLYQSG--------DALCTQCEAEGFRHITYYLDRPDVLARFTTKI 166 (891)
T ss_dssp TTEEEEC---SC-CSEEEEEEEEEECGGGCCSCCEEEEET--------TEEEEECTTTTGGGTSSBCCSTTCCEEEEEEE
T ss_pred CCEEEEE---eC-CCeEEEEEEEEEeecccCCCceEEEeC--------CEEEeccccCCCCccccCCCCcccceEEEEEE
Confidence 5678876 34 36899999999864 45678999974 26789999999999999999999999999999
Q ss_pred EeCCC-C-eEEecCCcccee-ecCCeEEEEEEeCCCCcceEEEEEEeeeeEeeec--cc--CCeEEEEEEcCCchhhHHH
Q 003010 163 DVPSE-L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--TS--DGIKVRVYCQVGKANQGKF 235 (858)
Q Consensus 163 ~~p~~-~-~a~Sn~~~~~~~-~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~--~~--~g~~v~v~~~~~~~~~~~~ 235 (858)
++|++ | +++|||+++++. ..+++++++|+.++|||+|++||+||+|..++.. +. +++++++|++|+..+.+++
T Consensus 167 ~~p~~~y~~alSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~ 246 (891)
T 3b34_A 167 IADKIKYPFLLSNGNRVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPW 246 (891)
T ss_dssp EEETTTCCEEEESSEEEEEEECSTTEEEEEEEEEEEECGGGCCEEEECCEEEEEEEECTTCCEEEEEEEECTTCGGGCHH
T ss_pred EeccccceEEEeCCccccceeecCCeEEEEEEeCCCccceeeEEEeccceEEeeeeeccCCCceEEEEEeccCcHHHHHH
Confidence 99997 6 899999988764 3677889999999999999999999999988742 22 3489999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCCccccccccceeecccccccCCCChHHHHHHHHHHHHHHHHHHHhc
Q 003010 236 ALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFG 315 (858)
Q Consensus 236 ~l~~~~~~l~~~e~~fg~~yp~~kld~v~~P~~~~gamEn~Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfG 315 (858)
+++.+++++++||++||+|||++|+|+|++|+|..||||||||++|++..+|+++..++...++.+..+||||+||||||
T Consensus 247 al~~~~~~l~~~e~~fG~pYP~~k~diVavPdf~~GaMEn~GLitf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHqWFG 326 (891)
T 3b34_A 247 AMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTG 326 (891)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBT
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCcCccccCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999988777778889999999999999999
Q ss_pred CccccCccchhHHhhhHHHHHHHHHHhhhCcch-hHHHHHHHHHH-HHHhhhccCCCCceeeecCCchhhhhcccccccc
Q 003010 316 NLVTMEWWTHLWLNEGFATWVSYLAADSLFPEW-KIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYR 393 (858)
Q Consensus 316 nlVt~~~w~d~WLnEGfA~y~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~D~~~~~~pi~~~~~~~~~i~~~f~~i~Y~ 393 (858)
|+|||+||+|+|||||||+|++..+.+...+.. ..... +.... .++..|+...+||+.. .++.+++..|+.++|.
T Consensus 327 NlVT~~~W~dlWLnEGFAtY~e~~~~~~~~~~~~~~~~~-~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~Y~ 403 (891)
T 3b34_A 327 NRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINN-VRTMRGLQFAEDASPMAHPIRP--DMVIEMNNFYTLTVYE 403 (891)
T ss_dssp TTEEESSGGGHHHHHHHHHHHHHHHHHHHSCHHHHHHHH-HHHHHHTHHHHHTSTTCCCSSC--SEESCGGGGCCHHHHH
T ss_pred CCCcccchhhceehHHHHHHHHHHHHHHHhCHHHHHHHH-HHHHHHhhhhhhccccCCCCcc--ccccccccccccchhh
Confidence 999999999999999999999988887776532 11111 11111 2366788888999864 2356778899999999
Q ss_pred chhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHHHHHhhcCCCcceEEEEEeC----C--
Q 003010 394 KGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKE----E-- 467 (858)
Q Consensus 394 Kga~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg~~l~~~~~~W~~~~G~P~l~v~~~~----~-- 467 (858)
||++|||||+..||++.|+++|+.|+++|+|++++++|||+++++++|.|++.| ++|++|+|+|+++|++.. +
T Consensus 404 KGa~VLrML~~~lG~e~F~~gLr~Yl~~~~~~~att~Df~~ale~~sg~dL~~f-~~W~~q~G~P~l~V~~~~~~~~~~~ 482 (891)
T 3b34_A 404 KGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHF-RRWYSQSGTPIVTVKDDYNPETEQY 482 (891)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHCCCCTTT-THHHHCCSCCEEEEEEEEETTTTEE
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHH-HHHHcCCCCceEEEEEEeecCCCEE
Confidence 999999999999999999999999999999999999999999999999999985 799999999999998752 3
Q ss_pred EEEEEEEeecCCCCCCCCeeEEEEEEEeCc--cce----------eeeEEeecceeEEEecccccccccCCCCCCceEEE
Q 003010 468 KLELEQSQFLSSGSPGDGQWIVPITLCCGS--YDV----------CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKL 535 (858)
Q Consensus 468 ~~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~--~~~----------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wi~~ 535 (858)
+++|+|+|+...+......|+|||++...+ +.. ...+++++++.++.++.+ ... .|+.+
T Consensus 483 ~ltl~Q~~~~~~~~~~~~~~~iPi~v~l~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v-------~~~--P~~~l 553 (891)
T 3b34_A 483 TLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNSVLNVTQAEQTFVFDNV-------YFQ--PVPAL 553 (891)
T ss_dssp EEEEEEECCCBTTBSCCCCCCEEEEEEEECTTSCBCCCEETTEECCSEEEECSSEEEEEECCC-------CSC--CEEEE
T ss_pred EEEEEEecCCCCCCCCCceEEEEEEEEEEcCCCCcccccccccccceEEEecCCcEEEEEccC-------CCC--CcEEE
Confidence 589999997654444456899999997642 221 124678888888888742 123 69999
Q ss_pred cCCceeEEEEEcCHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHh--------cc-CC-HHHHHHHHHh-cccCC-cH
Q 003010 536 NVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMA--------RQ-QT-LTSLLTLMAS-YSEET-EY 603 (858)
Q Consensus 536 N~~~~gyyRV~Yd~~~w~~l~~~l~~~~i~~~~Ra~li~D~~~la~~--------g~-l~-~~~~l~l~~~-l~~E~-~~ 603 (858)
|.+..|||||+||..+|+++... .. .-++.+|.+.+++++..... |. +. ...+++.++. |..+. +.
T Consensus 554 ~~~~s~~~~v~~~~~~~~l~~~l-~~-d~d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 631 (891)
T 3b34_A 554 LCEFSAPVKLEYKWSDQQLTFLM-RH-ARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDP 631 (891)
T ss_dssp STTCCSSCEEECCCCHHHHHHHH-HH-CSSHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSSCH
T ss_pred cCCCcceEEEeCCCCHHHHHHHH-hh-CCChhHHHHHHHHHHHHHHHHHHHhhhcCCCcCccHHHHHHHHHHhcCCCcCH
Confidence 99999999999999888877543 32 33578888888887765432 21 12 2345554443 43332 33
Q ss_pred HHHHHHHH--HHHHHHHHHhccChhHHHHHHHHH--------HHHhHHHHHhcCCccC---CCCCHHHHHHHHHHHHHHH
Q 003010 604 TVLSNLIT--ISYKIGRIAADARPELLDYLKQFF--------ISLFQNSAEKLGWDSK---PGESHLDALLRGEIFTALA 670 (858)
Q Consensus 604 ~~w~~~~~--~l~~l~~~~~~~~~~~~~~~~~~~--------~~l~~~~~~~lg~~~~---~~~~~~~~~lr~~i~~~ac 670 (858)
..-..++. ....|...+..-+|+.....++++ ...+..+|+++- ... ..+....+.||..+|.+.|
T Consensus 632 ~~~a~~l~lp~~~~~~~~~~~~d~~~i~~~r~~~~~~la~~~~~~~~~~~~~~~-~~~~~~~~~~~~~r~l~n~~l~~l~ 710 (891)
T 3b34_A 632 ALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANY-QSEYRVEHEDIAKRTLRNACLRFLA 710 (891)
T ss_dssp HHHHHHTSCCCHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTC-CSSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 22222211 122333322211233222222222 333455666653 211 1123345889999999999
Q ss_pred hcCCHHHHHHHHHHHHHhhcCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCH
Q 003010 671 LLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDV 750 (858)
Q Consensus 671 ~~g~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~ 750 (858)
..+.++..+.|.+.|+.- + + ---|-+.+.+++..-....++..+...++++.....-+|--.+.| ++..+
T Consensus 711 ~~~~~~~~~~~~~~~~~a--~-n-----mtd~~~al~~~~~~~~~~~~~~l~~f~~~~~~~~lv~~kwf~~qa--~~~~~ 780 (891)
T 3b34_A 711 FGETHLADVLVSKQFHEA--N-N-----MTDALAALSAAVAAQLPCRDALMQEYDDKWHQNGLVMDKWFILQA--TSPAA 780 (891)
T ss_dssp TSCHHHHHHHHHHHHHHC--S-S-----HHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTTCHHHHHHHHHHHH--TCCCT
T ss_pred hCCCchHHHHHHHHHhhC--C-C-----hHHHHHHHHHHhccCcchHHHHHHHHHHHhccCcHHHHHHHHHHh--CCCCc
Confidence 988677777888888752 1 1 112222222222210012345567777777755545566666666 44555
Q ss_pred HHHHHHHHHHhcC
Q 003010 751 NIVLEVLNFLLSS 763 (858)
Q Consensus 751 ~ll~~~L~~~l~~ 763 (858)
..+.++-.+.-.+
T Consensus 781 ~~~~~v~~l~~h~ 793 (891)
T 3b34_A 781 NVLETVRGLLQHR 793 (891)
T ss_dssp THHHHHHHHTTCT
T ss_pred cHHHHHHHHhcCC
Confidence 5677766665554
No 8
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=100.00 E-value=6.3e-84 Score=759.46 Aligned_cols=526 Identities=18% Similarity=0.273 Sum_probs=420.3
Q ss_pred CCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEEcC-CCEEEEEeCCceEeEEEEEeccCCCCccccCeeEEEec-
Q 003010 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD-TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVE- 83 (858)
Q Consensus 6 ~~~rLp~~v~P~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~-~~~i~Lh~~~l~I~~~~~~~~~~~~~~~~~~~~~~~~~- 83 (858)
..+|+|..+.|.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+++|+|.++.+.+..+. .....+..+.
T Consensus 18 ~~~~~p~~~~~~hy~l~l~~d~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~l~I~~v~v~~~~g~----~~~~~~~~~~~ 93 (605)
T 3cia_A 18 YTYANYDQVKATHVYLDLNVDFDKKSLSGFAELSLDWFTDNKAPLILDTRDLVIHRVMAKNSQGQ----WVKVNYDLAKR 93 (605)
T ss_dssp SCCCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECCSSCCCEEEBCSSEEEEEEEEECTTCC----EEEECEEEEEE
T ss_pred ccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEcCCCC----ccceeEEecCc
Confidence 3579999999999999999999999999999999999886 799999999999999988321010 1123334432
Q ss_pred ---CCeEEEEEeCCCcCCceEEEEEEEEeeeCCCCcceEEeee-ccCCeeeecccccCCcCCccceeccCCCCCCeeEEE
Q 003010 84 ---ADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSY-ELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFK 159 (858)
Q Consensus 84 ---~~~~l~i~l~~~L~~g~~~l~i~y~g~l~~~~~G~y~~~y-~~~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~ka~f~ 159 (858)
.++.+.|.++ ++.++|+|.|+|.++. .|++...+ ..+|..+++++|||||++||+||||||+|++||+|+
T Consensus 94 ~~~~~~~l~i~l~----~~~~~l~i~y~~~~~~--~gl~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~katf~ 167 (605)
T 3cia_A 94 DDVLGSKLTINTP----LNAKKVRVYYNSTEKA--TGLQWLSAEQTAGKEKPFLFSQNQAIHARSWIPIQDTPSVRVTYT 167 (605)
T ss_dssp CSSSCEEEEECCC----TTCSEEEEEEEECTTC--TTEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCCTTCCEEEE
T ss_pred cccCCCeEEEEeC----CceEEEEEEEEEecCC--CceEEecccccCCCcccEEEecCcccChhhceecCCCcCceeEEE
Confidence 3567888765 2789999999998654 46654333 235777888899999999999999999999999999
Q ss_pred EEEEeCCCCeEEecCCccceeecCCeEEEEEEeCCCCcceEEEEEEeeeeEeeecccCCeEEEEEEcCCchhhHHHHHHH
Q 003010 160 ITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV 239 (858)
Q Consensus 160 l~i~~p~~~~a~Sn~~~~~~~~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~ 239 (858)
++|++|++|+|+|||....+...++ +++|+.++|||+|++||++|+|...+ .|+++++|++|+..+.++++++.
T Consensus 168 i~i~~p~~~~alsng~~~~~~~~~~--~~~f~~t~pmstYl~a~~vg~f~~~~----~g~~~~v~~~p~~~~~~~~~~~~ 241 (605)
T 3cia_A 168 ARITTDKDLLAVMSANNEPGTERDG--DYFFSMPQAIPPYLIAIGVGDLEFKA----MSHQTGIYAESYILDAAVAEFDD 241 (605)
T ss_dssp EEEECCTTCEEEESSEEC----CCS--EEEEEEEEEECGGGCCEEEESCEEEE----SSSSEEEEECSTTHHHHHHHSTT
T ss_pred EEEEEcCCcEEEecCCccceecCCC--eEEEeeCCCccceeEEEEEeeeeEec----CCCeEEEEeccChHHHHHHHHHH
Confidence 9999999999998875433322333 68999999999999999999999876 36789999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCcceeec-CCCCCccccccccceeecccccccCCCChHHHHHHHHHHHHHHHHHHHhcCcc
Q 003010 240 AVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLV 318 (858)
Q Consensus 240 ~~~~l~~~e~~fg~~yp~~kld~v~~-P~~~~gamEn~Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlV 318 (858)
+.+++++++++|| |||++|+|+|++ |+|+.|||||||+ +|.+..++.++. .++.+||||+|||||||+|
T Consensus 242 ~~~~l~~~e~~fG-~YP~~k~d~v~~p~~f~~GgMEn~gl-tf~~~~ll~~~~--------~~~~viaHElaHqWfGnlV 311 (605)
T 3cia_A 242 TQAMIDKAEQMYG-KYRWGRYDLLMLPPSFPFGGMENPRL-SFITPTVVAGDK--------SLVNLIAHELAHSWSGNLV 311 (605)
T ss_dssp HHHHHHHHHHHHC-CCTTSCEEEEECCTTCSSSEECCTTE-EEECGGGCCSSS--------CSTHHHHHHHHHTTBTTTE
T ss_pred HHHHHHHHHHHhC-CCCCccccEEEECCccCCCcccCCcE-EEecchhccCcH--------HHHHHHHHHHHHHhhcccc
Confidence 9999999999999 999999999999 4999999999997 577766776543 2457999999999999999
Q ss_pred ccCccchhHHhhhHHHHHHHHHHhhhCcchhH--HHHHHHHHH-HHHhhhcc-CCCCceeeecCCchhhhhccccccccc
Q 003010 319 TMEWWTHLWLNEGFATWVSYLAADSLFPEWKI--WTQFLDECT-EGLRLDGL-AESHPIEVEVNHTGEIDEIFDAISYRK 394 (858)
Q Consensus 319 t~~~w~d~WLnEGfA~y~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~D~~-~~~~pi~~~~~~~~~i~~~f~~i~Y~K 394 (858)
||+||+|+|||||||+|++++++++.+|++.. ...+....+ .++ |.+ ..+||+..++. ..+++..|+.++|.|
T Consensus 312 T~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~l--~~~~~~~~pl~~~~~-~~~~~~~f~~i~Y~K 388 (605)
T 3cia_A 312 TNESWRDLWLNEGFTSYVENRIMEAVFGTDRAVMEQALGAQDLNAEI--LELDASDTQLYIDLK-GRDPDDAFSGVPYVK 388 (605)
T ss_dssp EESSTTSTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--HHSCTTTTSSSCCCT-TCCTTTSCCSHHHHH
T ss_pred ccCcchHhHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH--HhhccCCCCcccCCC-CCChhHhhCccchhH
Confidence 99999999999999999999999999887632 111111111 222 445 67789876654 245677899999999
Q ss_pred hhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCC----CHHH-HHHHhhcCCCcceEEEEEeCCEE
Q 003010 395 GASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGE----PVNK-LMNSWTKQKGYPVISVKVKEEKL 469 (858)
Q Consensus 395 ga~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg~----~l~~-~~~~W~~~~G~P~l~v~~~~~~~ 469 (858)
|++|||||+..+|++.|+++||.|+++|++++++++|||+++++++|. ++.. +|++|++|+|+|+++++.+.+.+
T Consensus 389 Ga~vl~mL~~~lG~e~F~~~lr~yl~~~~~~~~t~~df~~~l~~~~~~~~~~~l~~~~~~~W~~~~G~P~~~~~~~~~~~ 468 (605)
T 3cia_A 389 GQLFLMYLEEKFGRERFDAFVLEYFDSHAFQSLGTDNFVKYLKANLTDKYPNIVSDNEINEWIFKAGLPSYAPQPTSNAF 468 (605)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHTTTTTSTTSSCHHHHHHHHHSSSCCSSSCCCCCHHH
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhccccccccchhhHHHHhcCCCCCceeccCCchHH
Confidence 999999999999999999999999999999999999999999999875 5655 79999999999998876543110
Q ss_pred EEEEEeecCCCCCCCCeeEEEEEEEeCccceeeeEEeecceeEEEecccccccccCCCCCCceEEEcCCceeEEEEEcCH
Q 003010 470 ELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDK 549 (858)
Q Consensus 470 ~l~Q~rf~~~~~~~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~gyyRV~Yd~ 549 (858)
. + .... ..-|+.... . . ..+.|++|+.
T Consensus 469 ~--~-----------------------~~~l-~~~w~~~~~----------------~---~--------~~~~~~~~~~ 495 (605)
T 3cia_A 469 K--V-----------------------IDKQ-INQLVTDEL----------------T---L--------EQLPTAQWTL 495 (605)
T ss_dssp H--H-----------------------HHHH-TCCTTTTSS----------------C---C--------SCSGGGGCCS
T ss_pred H--H-----------------------HHHH-HHHHHhcCC----------------C---c--------cccchhhCCH
Confidence 0 0 0000 000111100 0 0 1123899999
Q ss_pred HHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHhccCCHHHHHHHHHhcccCCcHHHHHHHHHHHHHHH
Q 003010 550 DLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIG 617 (858)
Q Consensus 550 ~~w~~l~~~l~~~~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~ 617 (858)
.+|..+++.|.. .|+ .+|+++|||+|+|+.++.. ++.++.++++.++.++.+|..+...|..+.
T Consensus 496 ~~~~~~l~~l~~-~l~-~~~~~~l~~~~~~~~~~n~--ei~~~~~~~~~~~~~~~~~~~~~~~l~~~g 559 (605)
T 3cia_A 496 HEWLHFINNLPV-DLD-HQRMVNLDKAFDLTNSSNA--EIAHAWYLLSVRADYKEVYPAMAKYLKSIG 559 (605)
T ss_dssp HHHHHHHHHSCS-CCT-TC-CHHHHHHHCCSSCSSH--HHHHHHHHHHHHHTCGGGHHHHHHHHHHCC
T ss_pred HHHHHHHHhcCc-cCC-HHHHHHHHHhhCCCcCCCH--HHHHHHHHHHHhcCChhHHHHHHHHHHHcC
Confidence 999999999976 788 9999999999999887755 588999999999999999999887775543
No 9
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=100.00 E-value=1.1e-81 Score=740.96 Aligned_cols=448 Identities=25% Similarity=0.389 Sum_probs=385.9
Q ss_pred CCCCCCCc-eeeEEEEEEEecCCCCeEEEEEEEEEEEEcC-CCEEEEEeCCceEeEEEEEeccCCCCcccc-CeeEEEec
Q 003010 7 QPRLPKFA-VPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD-TKFIVLNAADLTINNRSVSFTNKVSSKALE-PTKVELVE 83 (858)
Q Consensus 7 ~~rLp~~v-~P~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~-~~~i~Lh~~~l~I~~~~~~~~~~~~~~~~~-~~~~~~~~ 83 (858)
++..|..+ ++.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+++|+|++|.+++.. +. ......+.
T Consensus 6 s~a~p~~~~rv~Hy~L~l~vD~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~L~I~~V~v~g~~------~~~~~~~~~~~ 79 (608)
T 3u9w_A 6 SLASPASVCRTKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQE------VKYALGERQSY 79 (608)
T ss_dssp CCSCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECSTTEEEEEEEESSCEEEEEEETTEE------CCEEECCCCGG
T ss_pred cccCcccCCCceEEEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEECCEE------cceeccccccc
Confidence 45778876 7999999999999999999999999999887 4899999999999999986421 11 01111234
Q ss_pred CCeEEEEEeCCCcCCc-eEEEEEEEEeeeCCCCcceEEeeec-cCCeeeecccccCCcCCccceeccCCCCCCeeEEEEE
Q 003010 84 ADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYE-LNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKIT 161 (858)
Q Consensus 84 ~~~~l~i~l~~~L~~g-~~~l~i~y~g~l~~~~~G~y~~~y~-~~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~ka~f~l~ 161 (858)
.++.+.|.++.+|++| .++|+|.|+|+++.. |++...+. .+|..+++++|||||++||+||||||+|++||+|+++
T Consensus 80 ~~~~l~I~l~~~l~~g~~~~l~I~y~~~~~~~--~~~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~Katf~i~ 157 (608)
T 3u9w_A 80 KGSPMEISLPIALSKNQEIVIEISFETSPKSS--ALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQDTPSVKLTYTAE 157 (608)
T ss_dssp GCEEEEEEEEEEECTTCEEEEEEEEECCTTCT--TEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCSTTCCEEEEEE
T ss_pred cCceEEEEcCCCCCCCCEEEEEEEEEEEcCCC--ceeeecccccCCCcceEEEEcccCCCCCEEEEecCccceeEEEEEE
Confidence 5678999999999999 999999999987654 55544443 3577788899999999999999999999999999999
Q ss_pred EEeCCCCeEEecCCcccee---ecCCeEEEEEEeCCCCcceEEEEEEeeeeEeeecccCCeEEEEEEcCCchhhHHHHHH
Q 003010 162 LDVPSELVALSNMPVIDEK---VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALN 238 (858)
Q Consensus 162 i~~p~~~~a~Sn~~~~~~~---~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~ 238 (858)
|++|++++|+|||++.++. .++++++++|..++|||+||+||+||+|+..+ .|+++++|++|+..+.++++++
T Consensus 158 I~~p~~~~alsng~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~----~~~~~~v~~~p~~~~~~~~~~~ 233 (608)
T 3u9w_A 158 VSVPKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVGALESRQ----IGPRTLVWSEKEQVEKSAYEFS 233 (608)
T ss_dssp EEEETTSEEEESSEEEEEEECTTCTTEEEEEEEEEEEECGGGCCEEEESCEEEE----EETTEEEEECHHHHHHHHHHTT
T ss_pred eeCCcceeeeeeccccceeeccCCCCeEEEEEEecCCcccEEEEEEEeeeeeEe----cCCceEEEeChhhHHHHHHHHH
Confidence 9999999999999887653 24568899999999999999999999998765 3677899999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCcceeec-CCCCCccccccccceeecccccccCCCChHHHHHHHHHHHHHHHHHHHhcCc
Q 003010 239 VAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNL 317 (858)
Q Consensus 239 ~~~~~l~~~e~~fg~~yp~~kld~v~~-P~~~~gamEn~Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnl 317 (858)
.+.++|++||++|| |||++++++|++ |+|+.||||||||+++++..++.+.. ++.+||||+|||||||+
T Consensus 234 ~~~~~l~~~e~~~g-~Yp~~~~~~vv~~p~f~~GgMEn~gl~~~~~~~l~~~~~---------~~~viaHElAHqWfGnl 303 (608)
T 3u9w_A 234 ETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKS---------LSNVIAHEISHSWTGNL 303 (608)
T ss_dssp THHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSST---------TTHHHHHHHHTTTBTTT
T ss_pred HHHHHHHhHHhcCC-CCCchhhceeeecccccchhhhcCcceeeeeeeecccch---------hHHHHHHHhhhhhhcCc
Confidence 99999999999999 999999998887 79999999999999999996655443 55689999999999999
Q ss_pred cccCccchhHHhhhHHHHHHHHHHhhhCcchhHHHHHHHHHH-HHHhhhccCCCCceeeecCCchhh--hhccccccccc
Q 003010 318 VTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEI--DEIFDAISYRK 394 (858)
Q Consensus 318 Vt~~~w~d~WLnEGfA~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~pi~~~~~~~~~i--~~~f~~i~Y~K 394 (858)
||++||+|+|||||||+|++++++++++|++.....+..... .....|....+||+..++.++.++ +..|+.++|.|
T Consensus 304 VT~~~W~d~WLnEGfAty~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~i~Y~K 383 (608)
T 3u9w_A 304 VTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYEK 383 (608)
T ss_dssp EEESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGSSSCCCTTCCHHHHCSSHHHHH
T ss_pred CccccccchhHHHhHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHhhhhccCCccccccccccCChhhcccHHHHhH
Confidence 999999999999999999999999999998766555554433 334567888899998877766554 56899999999
Q ss_pred hhHHHHHHHHhhC-HHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHH----HHHhhcCCCcceEEEEEeC---
Q 003010 395 GASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----MNSWTKQKGYPVISVKVKE--- 466 (858)
Q Consensus 395 ga~vl~mL~~~lG-~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg~~l~~~----~~~W~~~~G~P~l~v~~~~--- 466 (858)
|+++||||+..|| ++.|+++||.|+++|+|++++++|||+++++++|.++..+ |++|++|+|+|+|+|+++.
T Consensus 384 Ga~vL~mL~~~lG~~~~F~~~lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~~~~~~~~~W~~~~G~P~v~v~~d~~~~ 463 (608)
T 3u9w_A 384 GFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDWNAWLYSPGLPPIKPNYDMTLT 463 (608)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTGGGHHHHHTSCHHHHHHCCSSCSSCCCCCCTTT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhccccchhhHHHHHHHhcCCCCCceeeeeccccc
Confidence 9999999999998 7889999999999999999999999999999999999888 9999999999999998764
Q ss_pred -CEEEEEEEee
Q 003010 467 -EKLELEQSQF 476 (858)
Q Consensus 467 -~~~~l~Q~rf 476 (858)
..++++|+++
T Consensus 464 ~~~~~l~q~~~ 474 (608)
T 3u9w_A 464 NACIALSQRWI 474 (608)
T ss_dssp HHHHHHHHHHH
T ss_pred cceeeHHhHHh
Confidence 2456667543
No 10
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=100.00 E-value=1.7e-81 Score=740.75 Aligned_cols=528 Identities=19% Similarity=0.292 Sum_probs=412.4
Q ss_pred CCCCCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEEcC----CCEEEEEeCCceEeEEEEEeccCCCCccccCeeEEE
Q 003010 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD----TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVEL 81 (858)
Q Consensus 6 ~~~rLp~~v~P~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~----~~~i~Lh~~~l~I~~~~~~~~~~~~~~~~~~~~~~~ 81 (858)
..+|+|..+.|.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+++|+|+++.+++. ...+..
T Consensus 20 ~~~~~p~~~~~~hY~L~l~~d~~~~~~~G~v~I~~~~~~~~~~~~~~i~Ld~~~l~I~~v~v~g~---------~~~~~~ 90 (632)
T 2xq0_A 20 STLSNYKDFAVLHTDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHIDGS---------KADFQI 90 (632)
T ss_dssp TCCSCGGGEEEEEEEEEEEEETTTTEEEEEEEEEEEECC---CCCCEEEEBCSSEEEEEEEETTE---------ECCEEE
T ss_pred ccccCCCceeEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCcCcEEEEEccCCEEEEEEECCe---------ecceEE
Confidence 3479999999999999999999999999999999999877 899999999999999988431 223333
Q ss_pred ec----CCeEEEEEeCCCcCCceEEEEEEEEeeeCCCCcceEEee-eccCCeeeecccccCCcCCccceeccCCCCCCee
Q 003010 82 VE----ADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSS-YELNGEKKNMAVTQFEPADARRCFPCWDEPACKA 156 (858)
Q Consensus 82 ~~----~~~~l~i~l~~~L~~g~~~l~i~y~g~l~~~~~G~y~~~-y~~~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~ka 156 (858)
+. .++.+.|.++++ .+.++|+|.|+|.++.. |++... +..+|. +++++|||||.+||+||||||+|++||
T Consensus 91 ~~~~~~~~~~l~I~l~~~--g~~~~l~I~Y~g~~~~~--gl~~~~~~~~~g~-~~~~~Tq~ep~~AR~~fPc~D~P~~Ka 165 (632)
T 2xq0_A 91 EQRKEPLGSRLVINNASC--NDNFTLNIQFRTTDKCT--ALQWLNSKQTKGG-KPYVFSQLEAIHARSLFPCFDTPSVKS 165 (632)
T ss_dssp CCCBTTTBCCEEEECCCS--SSEEEEEEEEEECTTCS--SEEEECTTTSTTS-SCEEEECCTTTTGGGTSCBCCSTTCCE
T ss_pred cccccccCcEEEEEecCC--CCEEEEEEEEeeecCcC--cceeecccccCCC-ceEEEeccccCCcceeeeecCCcccce
Confidence 32 356899998877 33999999999997654 444322 223455 788899999999999999999999999
Q ss_pred EEEEEEEeCCCCeEEecCCccceeecCCeEEEEEEeCCCCcceEEEEEEeeeeEeeecccCCeEEEEEEcCCchhhHHHH
Q 003010 157 TFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFA 236 (858)
Q Consensus 157 ~f~l~i~~p~~~~a~Sn~~~~~~~~~~~~~~~~F~~t~~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~ 236 (858)
+|+++|++| +.|++|+.+......++ .+++|+.++|||+|++||+||+|...+. |+++++|++|+..+.++++
T Consensus 166 tf~i~I~~p--~~vv~sg~~~~~~~~~~-~~~~F~~t~pmstYLva~~vg~f~~~~~----g~~~~v~~~p~~~~~~~~~ 238 (632)
T 2xq0_A 166 TFTASIESP--LPVVFSGIRIEDTSKDT-NIYRFEQKVPIPAYLIGIASGDLSSAPI----GPRSTVYTEPFRLKDCQWE 238 (632)
T ss_dssp EEEEEEECS--SCEEESSEECCCC-----CEEEEEEEEEECGGGCCEEESSCEEEEE----ETTEEEEECHHHHHHHHHH
T ss_pred EEEEEEEEc--hHHhccCccccceecCC-CeEEEEeCCccchhheeeeEecceeecc----CCeeEEEEccchHHHHHHH
Confidence 999999999 88886654333221122 2789999999999999999999998763 5679999999988888999
Q ss_pred HH-HHHHHHHHHHHHhCCCCCCCCcceeec-CCCCCccccccccceeecccccccCCCChHHHHHHHHHHHHHHHHHHHh
Q 003010 237 LN-VAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWF 314 (858)
Q Consensus 237 l~-~~~~~l~~~e~~fg~~yp~~kld~v~~-P~~~~gamEn~Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWf 314 (858)
++ .+.+++++||++|| |||++|+|+|++ |+|+.|||||||| +|.+..++.++. ....+||||+|||||
T Consensus 239 ~~~~~~~~l~~~e~~fG-pYP~~k~d~v~~pp~f~~GgMEn~gl-t~~~~~ll~~~~--------~~~~viaHElAHqWf 308 (632)
T 2xq0_A 239 FENDVEKFIQTAEKIIF-EYEWGTYDILVNVDSYPYGGMESPNM-TFATPTLLAHDR--------SNIDVIAHELAHSWS 308 (632)
T ss_dssp HTTTHHHHHHHHHHHSC-CCCSSCCCEEECCTTCCSSEECCTTC-EEECGGGCCSSS--------CSTHHHHHHHHHTTB
T ss_pred HHHHHHHHHHHHHHhcc-cCCcccccEEEECCCCCCCccccceE-EEeeceeccCch--------hHHHHHHHHHHHHHh
Confidence 98 99999999999999 999999999999 5999999999998 455555666543 246799999999999
Q ss_pred cCccccCccchhHHhhhHHHHHHHHHHhhhCcchhH--HHHHHHHHH-HHHhhhccCCCCc---eeeecCCchhhhhccc
Q 003010 315 GNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI--WTQFLDECT-EGLRLDGLAESHP---IEVEVNHTGEIDEIFD 388 (858)
Q Consensus 315 GnlVt~~~w~d~WLnEGfA~y~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~D~~~~~~p---i~~~~~~~~~i~~~f~ 388 (858)
||+||++||+|+|||||||+|++++++++.+|++.. ...+....+ .+ +|++..++| +..++.++.+++..|+
T Consensus 309 GnlVT~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~--l~~~~~~~pl~~l~~~~~~~~~~~~~f~ 386 (632)
T 2xq0_A 309 GNLVTNCSWNHFWLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNS--IDSMKDPERFSTLVQNLNDNTDPDDAFS 386 (632)
T ss_dssp TTTEEESSGGGTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH--HHTCSSHHHHTSSSCCCCSSSCGGGGCS
T ss_pred cCCCccCCcchhhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH--HHhcccCCCCcccccCCCCCCChHHhcc
Confidence 999999999999999999999999999999998642 222211112 22 255566788 4444443456778999
Q ss_pred cccccchhHHHHHHHHhhCH-HHHHHHHHHHHHHhccCCCChHHHHHHHHhccC---CCHHH-HHHHhhcCCCcceEEEE
Q 003010 389 AISYRKGASVIRMLQNYLGA-ECFQRSLASYIKKYACSNAKTEDLWAALEEGSG---EPVNK-LMNSWTKQKGYPVISVK 463 (858)
Q Consensus 389 ~i~Y~Kga~vl~mL~~~lG~-~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~sg---~~l~~-~~~~W~~~~G~P~l~v~ 463 (858)
.++|.||++|||||+..||+ +.|+++||.|+++|++++++++|||+++++++| .++.. +|++|++|+|+|+ +++
T Consensus 387 ~i~Y~KGa~vL~mL~~~lG~~e~F~~~Lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~l~~~~~~~W~~~~G~P~-~~~ 465 (632)
T 2xq0_A 387 TVPYEKGFNLLFHLETILGGKAEFDPFIRHYFKKFAKKSLDTFQFLDTLYEFYPEKKEILDSVDWETWLYKPGMPP-RPH 465 (632)
T ss_dssp SHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHHCGGGHHHHHTSCHHHHHHCCSCCC-CCC
T ss_pred chhhHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhhhccccccHHHHHHHhcCCCCCC-CcC
Confidence 99999999999999999999 999999999999999999999999999999987 46776 7999999999999 665
Q ss_pred EeCCE----EEEEEEeecCCCCCCCCeeEEEEEEEeCccceeeeEEeecceeEE--EecccccccccCCCCCCceEEEcC
Q 003010 464 VKEEK----LELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSF--DIKELLGCSISKEGDNGGWIKLNV 537 (858)
Q Consensus 464 ~~~~~----~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~wi~~N~ 537 (858)
.+.+. ..+.| .|..... . ... ..++ .++. . ++
T Consensus 466 ~~~~~~~~~~~l~~------------~w~~~~~--~-~~~----------~~~~~~~~~~---------~---d~----- 503 (632)
T 2xq0_A 466 FITALADNVYQLAD------------KWVEMAQ--H-LKT----------TEDFRSEFNA---------I---DI----- 503 (632)
T ss_dssp CCCHHHHHHHHHHH------------HHHHHTT--T-CCS----------HHHHHHHCCG---------G---GG-----
T ss_pred CCchHHHHHHHHHH------------HHHhccc--c-ccc----------ccccccCCCH---------H---HH-----
Confidence 44310 01111 1211000 0 000 0000 0110 1 11
Q ss_pred CceeEEEEEcCHHHHHHHHHHHHhc------------CCChhhHHHHHHHHHH--HHHhccCCHHHHHHHHHhcccCCcH
Q 003010 538 NQTGFYRVKYDKDLAARLGYAIEMK------------QLSETDRFGILDDHFA--LCMARQQTLTSLLTLMASYSEETEY 603 (858)
Q Consensus 538 ~~~gyyRV~Yd~~~w~~l~~~l~~~------------~i~~~~Ra~li~D~~~--la~~g~l~~~~~l~l~~~l~~E~~~ 603 (858)
. +|+...|..+.+.|..+ .++ .+|++++||+|. |+.++.. ++.++.++++.++...
T Consensus 504 ~-------~~~~~~~~~fl~~l~~~~~~~~~~~~~~~~l~-~~~~~~l~~~~~~~~~~~~n~--ei~~~~~~~~~~~~~~ 573 (632)
T 2xq0_A 504 K-------DFNSNQLVLFLETLTQNGHSNKKPKDFDWAKF-PVASRALLDIYQDNIVKSQNA--EVVFKMFKFQIFAKLQ 573 (632)
T ss_dssp T-------TCCHHHHHHHHHHHHTTCSSTTSCSCCCGGGC-HHHHHHHHHHTCCCCCTCCCH--HHHHHHHHHHHHTTCG
T ss_pred h-------hCCHHHHHHHHHHHHhcccccccccccCCCCC-HHHHHHHHHHHhhhhccCcCH--HHHHHHHHHHHhcCCh
Confidence 1 78999999999998742 466 889999999998 6666554 8899999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 003010 604 TVLSNLITISYKIGRI 619 (858)
Q Consensus 604 ~~w~~~~~~l~~l~~~ 619 (858)
.+|..+...|..+.+|
T Consensus 574 ~~~~~~~~~l~~~gr~ 589 (632)
T 2xq0_A 574 EEYKHLADWLGTVGRM 589 (632)
T ss_dssp GGHHHHHHHTTTCCCH
T ss_pred hHHHHHHHHHHHcCCe
Confidence 9999988777554433
No 11
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens}
Probab=100.00 E-value=1e-69 Score=613.40 Aligned_cols=379 Identities=20% Similarity=0.335 Sum_probs=339.8
Q ss_pred CcceEEEEEeCCEEEEEEEeecCCCCC---CCCeeEEEEEEEeCccceeeeEEeecceeEEEecccccccccCCCCCCce
Q 003010 456 GYPVISVKVKEEKLELEQSQFLSSGSP---GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGW 532 (858)
Q Consensus 456 G~P~l~v~~~~~~~~l~Q~rf~~~~~~---~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~w 532 (858)
|||+|+|++++++++|+|+||+.++.. .+..|+|||+|.+++++....+|+..++.++.++. ++ +|
T Consensus 1 GyPvvtV~~~~~~~~l~Q~RFl~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~l~~---------~~--~w 69 (419)
T 3rjo_A 1 GFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILPE---------EV--EW 69 (419)
T ss_dssp CEEEEEEEEETTEEEEEEEEEC----------CCCCEEEEEEESSCSSCEEEEECSSEEEEECSS---------CC--SC
T ss_pred CCCEEEEEECCCEEEEEEeeccCCCCCCCCCCeEEEEEEEEEeCCCCccceEEEecCceEEEcCC---------CC--ce
Confidence 999999999889999999999986543 23589999999987655455678887776776632 34 79
Q ss_pred EEEcCCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHhccCCHHHHHHHHHhcccCCcHHHHHHHH
Q 003010 533 IKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLI 610 (858)
Q Consensus 533 i~~N~~~~gyyRV~Yd~~~w~~l~~~l~~~--~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~ 610 (858)
|++|.+++||||||||+++|++|+++|..+ .||+.||+|||||+|+||++|+++|+.+|+|++||++|++|+||.+++
T Consensus 70 i~~N~~~~GyYRVnYd~~~w~~L~~~L~~~~~~i~~~dRa~LidD~~~La~ag~~~~~~~l~l~~yL~~E~~y~~w~~~~ 149 (419)
T 3rjo_A 70 IKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGL 149 (419)
T ss_dssp EEEEESSSSCCEEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGGGCCSHHHHHHHH
T ss_pred EEEeCCccceEEEEeCHHHHHHHHHHHhhCCccCCHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcccchHHHHHHHH
Confidence 999999999999999999999999999754 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccC-hhHHHHHHHHHHHHhHHHHHhcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhh
Q 003010 611 TISYKIGRIAADAR-PELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFL 689 (858)
Q Consensus 611 ~~l~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g~~~c~~~A~~~f~~~~ 689 (858)
+.|.+|..++...+ ++.+..|++|+++++.|+++++||++ ++++.++++|..++++||.+|+++|+++|+++|++|+
T Consensus 150 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lgw~~--~~~~~~~~lR~~~l~~ac~~g~~~c~~~A~~~f~~~~ 227 (419)
T 3rjo_A 150 NELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLIDKQTWTD--EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWK 227 (419)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHCCSSC--CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHcCCCC--CchHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 99999999986432 45789999999999999999999984 5889999999999999999999999999999999999
Q ss_pred cCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCc-cccc
Q 003010 690 ADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSE-VRSQ 768 (858)
Q Consensus 690 ~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~~ll~~~L~~~l~~~-ir~q 768 (858)
+++..+.||||+|.+|||++++ + +++|+++|++|+++++++||..+|.||||++||++++++|+++++++ ||+|
T Consensus 228 ~~~~~~~i~~dlr~~Vy~~~~~---~--~~~~~~l~~~y~~s~~~~ek~~ll~aL~~s~d~~ll~~~L~~~l~~~~ir~q 302 (419)
T 3rjo_A 228 ESNGNLSLPVDVTLAVFAVGAQ---S--TEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWLLDESFKGDKIKTQ 302 (419)
T ss_dssp HTTTCSCCCGGGHHHHHHHHTT---S--HHHHHHHHHHHHHCCCHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTSSSCGG
T ss_pred hCCCCCCCCCCcceeEEeeeeC---C--HHHHHHHHHHHhcCCCHHHHHHHHHHcCCCCCHHHHHHHHHHHhCCCCCchh
Confidence 8754447999999999987643 3 88999999999999999999999999999999999999999999876 6999
Q ss_pred cceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchhHHHHHhccccCCHHHHHHHHhhhc--------------
Q 003010 769 DAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPVCCLHLSNYVFRFST-------------- 830 (858)
Q Consensus 769 d~~~~~~-vs~~--g~~~aw~fl~~n~~~i~~~~~~~-~~l~~~i~~~~~~~~t~~~~~~v~~F~~-------------- 830 (858)
|+..++. |+.| |++++|+|+++||+.|.++|+.+ +.++++|..+++.|+|+++++++++||+
T Consensus 303 D~~~~~~~v~~n~~g~~~aw~fl~~nw~~l~~~~~~~~~~~~~~i~~~~~~~~t~~~l~e~~~Ff~~~~~~~~~~~~~~q 382 (419)
T 3rjo_A 303 EFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKENGSQLRCVQQ 382 (419)
T ss_dssp GHHHHHHHHHTSTTTHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHTTTTCCSHHHHHHHHHHHHTTTTC-CCCHHHHH
T ss_pred HHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhCcCchhHHHHHHHHhhcCCCHHHHHHHHHHHHhCcccchHHHHHHH
Confidence 9999998 8777 99999999999999999999854 6799999999999999999999999998
Q ss_pred -----cccccccccccchhHHHHHhhh
Q 003010 831 -----LTYVHFKCFPLDPFFVSFCCLA 852 (858)
Q Consensus 831 -----~~~i~w~~~~~~~~~~~~~~~~ 852 (858)
..||+|++++.+.+.+|+++..
T Consensus 383 ale~i~~ni~W~~~~~~~v~~wL~~~~ 409 (419)
T 3rjo_A 383 TIETIEENIGWMDKNFDKIRVWLQSEK 409 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7899999999999999998654
No 12
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=99.95 E-value=1.2e-27 Score=277.69 Aligned_cols=297 Identities=14% Similarity=0.146 Sum_probs=203.2
Q ss_pred CeeEEEEEEEeCCC---CeEEecCCccceeecCCeEEEEEEeCC---CCcceEEEEEEeeeeEeeecccCCeEEEEEEcC
Q 003010 154 CKATFKITLDVPSE---LVALSNMPVIDEKVDGNMKTVSYQESP---IMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQV 227 (858)
Q Consensus 154 ~ka~f~l~i~~p~~---~~a~Sn~~~~~~~~~~~~~~~~F~~t~---~mstyl~a~~vg~f~~~~~~~~~g~~v~v~~~~ 227 (858)
...+++++|..|++ |.+.+.++....... +. .+|.... .+.+ -+.+|+|...+. +..|+++++...+
T Consensus 119 ~~~p~~~~i~~P~~~~~W~vaT~L~~~~~~~~-~~--~~f~a~~yd~LvDs---Pv~~G~~~~~~~-~~~g~p~~l~v~~ 191 (597)
T 4fgm_A 119 TDLPCELHLHAPPEAPLWKVATGMPRKSGQPH-SW--GCFRADNYDALIDY---PFLIGDLTIEEF-IAHGIKHSLVLSG 191 (597)
T ss_dssp TTSCEEEEECCCTTCTTCEEEESSCBCSSCTT-SS--EEEEESSHHHHTTC---CEEEESCEEEEE-EETTEEEEEEEES
T ss_pred cCCcEEEEEECCCCCCcceEEecCCccCCCCC-cc--eEEEcCCHHHHhcc---hhcccCcEEEEe-ccCCeEEEEEEEc
Confidence 45678999999999 999988876543211 22 2343210 0110 146789987663 3568888876554
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhCCCCCCCCcceeec-CCCCCccccccccc--eeecccccccCCCChHHHHHHHHHH
Q 003010 228 GKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLV--TYRETALLYDDQHSAAANKQRVATV 304 (858)
Q Consensus 228 ~~~~~~~~~l~~~~~~l~~~e~~fg~~yp~~kld~v~~-P~~~~gamEn~Gli--~~~e~~ll~~~~~~~~~~~~~~~~~ 304 (858)
......+.++..+++++++++++|| |||+++++++.. ++...|||||.+.. ++++..+.......+.........+
T Consensus 192 ~~~~d~~~~~~~~~~~~~~~~~~fG-~yP~~~Y~fl~~~~~~~~GgmEh~~st~l~~~~~~l~~~~~~~~~~~~~~~~~l 270 (597)
T 4fgm_A 192 RHYADTSRITADLAKICETQISLFE-EAPFQSYTFLTMVVGNGFGGLEHRNSTALLCSRKDLISAHQYEMNDNYQTFLSL 270 (597)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHT-SCSCSEEEEEEEEESSCCEEEECSSEEEEEEEGGGSCCTTCCSCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhC-CCCCCceEEEEEccCCCCcccccCCceEEEeCchhccccccccchhhhhchhhh
Confidence 4334568888999999999999999 999999999864 45688999999864 3565533322222233455678899
Q ss_pred HHHHHHHHHhcCcccc-----------CccchhHHhhhHHHHHHHHHHhhhC--cchhHHHHHHHHHHHHHhhhccCCCC
Q 003010 305 VAHELAHQWFGNLVTM-----------EWWTHLWLNEGFATWVSYLAADSLF--PEWKIWTQFLDECTEGLRLDGLAESH 371 (858)
Q Consensus 305 iaHElaHqWfGnlVt~-----------~~w~d~WLnEGfA~y~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~ 371 (858)
++||++||||||.|++ +||+++||+||||+|++.++..+.. ....+... +......+........+
T Consensus 271 iaHE~~H~W~g~~i~p~~~~~~d~~~~~~~~~lWl~EG~t~Y~~~l~~~r~G~~~~~~~~~~-l~~~i~~~~~~~gr~~~ 349 (597)
T 4fgm_A 271 CCHEYFHSWNIKTLKPKAFLPYQLEKESYTEQLWFYEGMTSYFDDYLLHTSGIIDEKRYLKL-LGDTLSRVERGAGQYQQ 349 (597)
T ss_dssp HHHHHHHTTBTTTBCBGGGSSCCCSSCCCCSTHHHHTHHHHHHHHHHHHHTTSSCHHHHHHH-HHHHHHHHHHSGGGGTC
T ss_pred HhhhhheeecccccccccccccccccccccccchhhhhHHHHHHHHHHHHcCCCCHHHHHHH-HHHHHHHhhcCCCcccc
Confidence 9999999999988875 4679999999999999998876542 11111111 11222222211112222
Q ss_pred ceeeec-------CCchhhhhccccccccchhHHHHHHHHhhCH-----HHHHHHHHHHHHHhcc--CCCChHHHHHHHH
Q 003010 372 PIEVEV-------NHTGEIDEIFDAISYRKGASVIRMLQNYLGA-----ECFQRSLASYIKKYAC--SNAKTEDLWAALE 437 (858)
Q Consensus 372 pi~~~~-------~~~~~i~~~f~~i~Y~Kga~vl~mL~~~lG~-----~~F~~~l~~yl~~~~~--~~~~~~df~~~l~ 437 (858)
|+.... ..+++.........|.||+++++||+..|++ +.|+++||.|+++|.. ++++++||.++++
T Consensus 350 sl~~ss~~aw~~~yr~~~n~~n~~~s~Y~KGalv~~~LD~~lR~~s~g~~sldd~mr~l~~~~~~~~~~~t~~d~~~~~e 429 (597)
T 4fgm_A 350 SVTESSFLAWTKFYQQNENAPNSIVSYYAKGALIALSLDLMLRLQSDHKLTLARVMKELWHEFGKTSIGTADDTVINWLN 429 (597)
T ss_dssp CHHHHHHTCCCCCTTCCTTHHHHCCCTTHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHTTTTCCBCTTHHHHHHH
T ss_pred ChHHcCchhhhccccCCcccCCcccccchHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHhCcCCCCCCHHHHHHHHH
Confidence 332110 0011111112234699999999999888865 4799999999999874 6899999999999
Q ss_pred hccCCCHHHHHHHhhcCCCcce
Q 003010 438 EGSGEPVNKLMNSWTKQKGYPV 459 (858)
Q Consensus 438 ~~sg~~l~~~~~~W~~~~G~P~ 459 (858)
+++|.++.+|+++|+++++.|-
T Consensus 430 ~~sG~dl~~ff~~~l~~t~~~p 451 (597)
T 4fgm_A 430 QYPGIDISDFLKDALYNKESLS 451 (597)
T ss_dssp TSTTCCCHHHHHHHHHSCSCCC
T ss_pred HhcCcCHHHHHHHHHhCCCCcc
Confidence 9999999999999999998753
No 13
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=76.07 E-value=6.7 Score=40.60 Aligned_cols=103 Identities=24% Similarity=0.345 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCC--cceeecCCCCC-c---cccccccceeecccccccCCCChH-HHHHHHHHHH
Q 003010 233 GKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFAA-G---AMENYGLVTYRETALLYDDQHSAA-ANKQRVATVV 305 (858)
Q Consensus 233 ~~~~l~~~~~~l~~~e~~fg~~yp~~k--ld~v~~P~~~~-g---amEn~Gli~~~e~~ll~~~~~~~~-~~~~~~~~~i 305 (858)
+-.|...+.++.+||.+.|| .-++.- ..++..=.+.. + ..+| -.+..+.+.|....... .....-..++
T Consensus 67 avdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~Vhyg~~~~~~~y~N---AfWdg~~m~fGdGdg~~f~~~~~~lDVv 142 (301)
T 1bqb_A 67 GVDANYYAKQTYDYYKNTFG-RESYDNHGSPIVSLTHVNHYGGQDNRNN---AAWIGDKMIYGDGDGRTFTNLSGANDVV 142 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEECCCEETTEECTTC---EEECSSSEEECCCCSSSBSCGGGCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEEeCCCCCCCCccC---cEEcCCEEEEEcCCCcccCCccccccee
Confidence 34566678899999999999 556542 33333222211 1 1122 12222233333321000 0000124689
Q ss_pred HHHHHHHHhcCccccCccch-hHHhhhHHHHHHHH
Q 003010 306 AHELAHQWFGNLVTMEWWTH-LWLNEGFATWVSYL 339 (858)
Q Consensus 306 aHElaHqWfGnlVt~~~w~d-~WLnEGfA~y~~~~ 339 (858)
+||++|--.-....+..-.+ -=|||||+..++..
T Consensus 143 ~HE~tHGVt~~~agl~y~~eSGaLnEs~SDifg~~ 177 (301)
T 1bqb_A 143 AHEITHGVTQQTANLEYKDQSGALNESFSDVFGYF 177 (301)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHH
T ss_pred eeecccceecccCCCcccCCcCchhHHHHHHHhHh
Confidence 99999976554433333233 34899999999965
No 14
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=74.21 E-value=20 Score=37.09 Aligned_cols=98 Identities=17% Similarity=0.246 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCCCccccc--c--ccceeecccccccCCCChHHHHHHHHHHHHHH
Q 003010 233 GKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMEN--Y--GLVTYRETALLYDDQHSAAANKQRVATVVAHE 308 (858)
Q Consensus 233 ~~~~l~~~~~~l~~~e~~fg~~yp~~kld~v~~P~~~~gamEn--~--Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHE 308 (858)
+..|.-.+.++.+||.+.|| .-++. ..++..-.+.. ..+| | ..++|..-.-.+.+. .-..+++||
T Consensus 73 ~~DAhy~a~~~~d~y~~~~g-r~~id-~~l~~~Vhyg~-~y~NAfWdG~~M~fGDG~~~~~p~--------~~lDVv~HE 141 (301)
T 1u4g_A 73 LNDAHFFGGVVFKLYRDWFG-TSPLT-HKLYMKVHYGR-SVENAYWDGTAMLFGDGATMFYPL--------VSLDVAAHE 141 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSS-SCEEEEESCTT-TCCCEEECSSCEEECCCCSSBSCS--------CCHHHHHHH
T ss_pred hHHHHHhHHHHHHHHHHHcC-CCCCC-CceEEEEecCC-CccCcEecCcEEEeeCCCcccccc--------cccceeeec
Confidence 44555577899999999999 56665 23444333221 1222 2 123333321111111 134689999
Q ss_pred HHHHHhcCccccCccchh-HHhhhHHHHHHHHHH
Q 003010 309 LAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLAA 341 (858)
Q Consensus 309 laHqWfGnlVt~~~w~d~-WLnEGfA~y~~~~~~ 341 (858)
++|--......+....+. =|||||+..++..+.
T Consensus 142 ~tHGVt~~~agL~y~~eSGaLnEs~SDifG~~ve 175 (301)
T 1u4g_A 142 VSHGFTEQNSGLIYRGQSGGMNEAFSDMAGEAAE 175 (301)
T ss_dssp HHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccceeccccCccccCCccchhHHHHHHHHHHHH
Confidence 999887766555444443 389999999986643
No 15
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=73.87 E-value=3.2 Score=35.96 Aligned_cols=68 Identities=19% Similarity=0.251 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCcceeecCCCCCccccc-----cccceeecccccccCCCChHHHHHHHHHHHHHHHHHHH
Q 003010 239 VAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMEN-----YGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQW 313 (858)
Q Consensus 239 ~~~~~l~~~e~~fg~~yp~~kld~v~~P~~~~gamEn-----~Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 313 (858)
...++++-+.+..|+|. ++ +..+++-...|+-. -+.|.+... ++-. -+...++.++|||++|-=
T Consensus 27 ~L~~~~~~l~~~~~~~~--~~--v~v~~~~~~NAf~~g~~~~~~~i~v~~g-Ll~~------l~~~El~aVlaHElgH~~ 95 (107)
T 3cqb_A 27 WLLETVGRQAQQAGIGM--PT--VAIYDSADINAFATGAKRDDSLVAVSTG-LLHN------MTRDEAEAVLAHEVSHIA 95 (107)
T ss_dssp HHHHHHHHHHHHHTCCC--CE--EEEECCSSEEEEEECCC--CCEEEEEHH-HHHH------SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCC--Ce--EEEEECCCcCEEEEecCCCCCEEEEcHH-HHhh------CCHHHHHHHHHHHHHHHH
Confidence 34556666667778653 34 44444322222221 123444443 2211 134578999999999976
Q ss_pred hcCc
Q 003010 314 FGNL 317 (858)
Q Consensus 314 fGnl 317 (858)
-++.
T Consensus 96 ~~h~ 99 (107)
T 3cqb_A 96 NGDM 99 (107)
T ss_dssp TTCE
T ss_pred CCCH
Confidence 5543
No 16
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=69.00 E-value=8.4 Score=40.03 Aligned_cols=102 Identities=19% Similarity=0.123 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCC--CcceeecCCCC---Cccccccccceeeccc-ccccCCCChHHHHHHHHHHH
Q 003010 232 QGKFALNVAVKTLELYKEYFAVPYSLP--KLDMIAIPDFA---AGAMENYGLVTYRETA-LLYDDQHSAAANKQRVATVV 305 (858)
Q Consensus 232 ~~~~~l~~~~~~l~~~e~~fg~~yp~~--kld~v~~P~~~---~gamEn~Gli~~~e~~-ll~~~~~~~~~~~~~~~~~i 305 (858)
.+..|...+.++.+||.+.|| .-++. -+.++..=.+. ..|.=+...++|..-. ..+.+-. .-..++
T Consensus 69 aavdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~VHyg~~y~NAfW~g~~m~fGDGdg~~f~~~~-------~slDVv 140 (316)
T 3dnz_A 69 PAVDAHYYAGVTYDYYKNVHN-RLSYDGNNAAIRSSVHYSQGYNNAFWNGSQMVYGDGDGQTFIPLS-------GGIDVV 140 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEESCTTTCCCEEECSSCEEECCCCSSSBSCGG-------GCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCceEEEEEecCCCccCceEcCCEEEEeCCCCccccccc-------ccccce
Confidence 446677788999999999999 55664 23333322221 1232223344443321 1111110 124689
Q ss_pred HHHHHHHHhcCccccCccch-hHHhhhHHHHHHHHHH
Q 003010 306 AHELAHQWFGNLVTMEWWTH-LWLNEGFATWVSYLAA 341 (858)
Q Consensus 306 aHElaHqWfGnlVt~~~w~d-~WLnEGfA~y~~~~~~ 341 (858)
+||+.|--.........-.+ -=|||+|+..+...+.
T Consensus 141 ~HE~tHgvt~~~agL~y~~esGaLNEs~SDifG~~ve 177 (316)
T 3dnz_A 141 AHELTHAVTDYTAGLIYQNESGAINEAISDIFGTLVE 177 (316)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeccccccccCCCcccCCccchhHHHHHHHHHHHH
Confidence 99999976554333322222 2489999999986654
No 17
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=68.32 E-value=38 Score=41.86 Aligned_cols=190 Identities=15% Similarity=0.125 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHhccCCHHHHHHH-HHhcc---cCCcHHHHHHHHHHHHHHHHHHhcc--
Q 003010 550 DLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTL-MASYS---EETEYTVLSNLITISYKIGRIAADA-- 623 (858)
Q Consensus 550 ~~w~~l~~~l~~~~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l-~~~l~---~E~~~~~w~~~~~~l~~l~~~~~~~-- 623 (858)
.....|.+.+..+.++..+.++++.-+.++. . +-...++. ...+. ...+..+|.+++=.+..+-+.+...
T Consensus 356 ~a~~~i~~~i~~~~l~~~ea~~~l~~~~~~~---~-Pt~e~l~~~~~l~~~~~~~~~~~l~~ta~La~gslV~k~c~~~~ 431 (1056)
T 1lsh_A 356 EALLFLKRTLASEQLTSAEATQIVASTLSNQ---Q-ATRESLSYARELLNTSFIRNRPILRKTAVLGYGSLVFRYCANTV 431 (1056)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHTC---C-CCHHHHHHHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHhhccC---C-CCHHHHHHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHhccCC
Confidence 3456666677777888888777777544332 2 32333332 22332 2356678887777776665554321
Q ss_pred --ChhHHHHHHHHHHHHhHHHHHhcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCC--CCCCCCc
Q 003010 624 --RPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADR--TTPLLPP 699 (858)
Q Consensus 624 --~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g~~~c~~~A~~~f~~~~~~~--~~~~i~~ 699 (858)
+++....+.+++.+.+ ++ + + ..-+...|..++..|++..+. .+..++.+. .....|.
T Consensus 432 ~c~~~~v~~i~~~l~~~~----~~-------~-~---~~~~~~~LkaLGN~g~p~~l~----~l~~~l~~~~~~~~~~~~ 492 (1056)
T 1lsh_A 432 SCPDELLQPLHDLLSQSS----DR-------A-K---EEEIVLALKALGNAGQPNSIK----KIQRFLPGQGKSLDEYST 492 (1056)
T ss_dssp SCCGGGTHHHHHHHHHHH----HT-------T-C---HHHHHHHHHHHHHHTCGGGHH----HHHTTSTTSSSCCCCSCH
T ss_pred CCCHHHHHHHHHHHHHHH----hc-------C-C---hHHHHHHHHHhhccCChhHHH----HHHHhhcCccccccccch
Confidence 1222222332222222 11 1 1 223455666677777765433 334444331 1122344
Q ss_pred hhhhHhhheeeeccccCCHHHHHHHHHHHHcCCCHHH-HHHH-HHHhCCCCCHHHHHHHHHHHhc
Q 003010 700 DIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQE-KTRI-LSSLASCPDVNIVLEVLNFLLS 762 (858)
Q Consensus 700 ~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~e-k~~l-l~aL~ct~d~~ll~~~L~~~l~ 762 (858)
.+|.++.-++.+....-....-+.++..|.+...+.| |... +..|-|.++...++++.+.+..
T Consensus 493 rvr~aAi~ALr~~~~~~p~~v~~il~~i~~n~~e~~EvRiaA~~~Lm~t~P~~~~l~~ia~~l~~ 557 (1056)
T 1lsh_A 493 RVQAEAIMALRNIAKRDPRKVQEIVLPIFLNVAIKSELRIRSCIVFFESKPSVALVSMVAVRLRR 557 (1056)
T ss_dssp HHHHHHHHTTTTGGGTCHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhhhchHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHCcCHHHHHHHHHHHhh
Confidence 5553222222221111112345566666765444333 3332 2333355666666666665543
No 18
>2y3u_A Collagenase, collagenase G; hydrolase, gluzincin, metalloprotease; HET: P6G FLC; 2.55A {Clostridium histolyticum} PDB: 2y50_A* 2y6i_A*
Probab=67.04 E-value=2.3 Score=50.00 Aligned_cols=39 Identities=21% Similarity=0.425 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHhcCccccCccc---------hhHHhhhHHHHHHHH
Q 003010 301 VATVVAHELAHQWFGNLVTMEWWT---------HLWLNEGFATWVSYL 339 (858)
Q Consensus 301 ~~~~iaHElaHqWfGnlVt~~~w~---------d~WLnEGfA~y~~~~ 339 (858)
+..++.||++|.-=|-..-+.-|. -.|+.||||.|++.-
T Consensus 422 Lee~f~HEytHyLdgRy~~~G~f~~~~~y~~~~~vW~~EG~AEY~s~~ 469 (785)
T 2y3u_A 422 LEELFRHEYTHYLQARYLVDGLWGQGPFYEKNRLTWFDEGTAEFFAGS 469 (785)
T ss_dssp HHHHHHHHHHHHHHHHHTSCSSTTSSGGGTTTCSHHHHHHHHHHHTTB
T ss_pred ecccccchhhhccccccccccccccCcccccCCCceehhhHHHHHhcC
Confidence 345789999999855333333333 579999999999753
No 19
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=65.67 E-value=63 Score=32.21 Aligned_cols=130 Identities=12% Similarity=0.162 Sum_probs=80.3
Q ss_pred ChhhHHHHHHHHHH-HHHh--c----cCCHHHHHHH-HHhcccCCcHHHHHHHHHHHHHHHHHHhccChhHHHHHH-HHH
Q 003010 565 SETDRFGILDDHFA-LCMA--R----QQTLTSLLTL-MASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLK-QFF 635 (858)
Q Consensus 565 ~~~~Ra~li~D~~~-la~~--g----~l~~~~~l~l-~~~l~~E~~~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~-~~~ 635 (858)
.-.+|..-+..+.. ++.. . ..+|..+++. .+.|.++.+..+-..+...+..|..-+.. ..|. .|.
T Consensus 29 ~w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~------~~f~~~y~ 102 (249)
T 2qk1_A 29 KWKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKT------PGFSKDYV 102 (249)
T ss_dssp SHHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCT------TTSCHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhccc------ccccHHHH
Confidence 35678888888877 6642 1 3456777764 55566899999888999888887765431 2466 889
Q ss_pred HHHhHHHHHhcCCccCCCCCHHHHHHHHHHHHHHHhc------C-CHHHHHHHHHHHHHhhcCCCCCCCCchhhhHhhhe
Q 003010 636 ISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALL------G-HKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVA 708 (858)
Q Consensus 636 ~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~------g-~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~vy~~ 708 (858)
..++.+++++++= ............+..++... + .+.|++.. + ..+.+ + .+..|..+...
T Consensus 103 ~~llp~ll~~l~d----kk~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l---~-~~l~~----k-~~~vk~~al~~ 169 (249)
T 2qk1_A 103 SLVFTPLLDRTKE----KKPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDI---L-EHMKH----K-TPQIRMECTQL 169 (249)
T ss_dssp HHHHHHHHHGGGC----CCHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHH---H-HHTTC----S-SHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC----CCHHHHHHHHHHHHHHHHHccccccCCcHHHHHHHH---H-HHHcC----C-ChHHHHHHHHH
Confidence 9999999999972 12233345555555555555 3 44555443 2 33332 1 35677655544
Q ss_pred eeecc
Q 003010 709 VMQKV 713 (858)
Q Consensus 709 ~~~~~ 713 (858)
+.+.+
T Consensus 170 l~~~~ 174 (249)
T 2qk1_A 170 FNASM 174 (249)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 43333
No 20
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=63.78 E-value=11 Score=39.53 Aligned_cols=105 Identities=17% Similarity=0.211 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCCC--cceeecCCCCCccccccccceeecccccccCCCChH-HHHHHHHHHHHHH
Q 003010 232 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAA-ANKQRVATVVAHE 308 (858)
Q Consensus 232 ~~~~~l~~~~~~l~~~e~~fg~~yp~~k--ld~v~~P~~~~gamEn~Gli~~~e~~ll~~~~~~~~-~~~~~~~~~iaHE 308 (858)
.+..+...+.++.+||.+.|| .-++.- ..++..=.+.. ..+| -.+..+.+.|....... .....-..+++||
T Consensus 89 av~~ay~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg~-~y~N---AfWdG~~M~fGDG~g~~f~~~~~~lDVv~HE 163 (341)
T 2vqx_A 89 AVDEAYDYLGVTYDFFWQAFK-RNSLDNQGLPLTGSVHYGK-EYQN---AFWNGQQMVFGDGDGEIFNRFTIAIDVVGHA 163 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEESCSS-SCCC---EEECSSCEEECCCCSSSBCCTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEecCC-CccC---ceecCcEeEeeCCCCcccCCcccchhhhhhh
Confidence 355566678899999999999 445532 33333222211 1122 11112223332221000 0000123689999
Q ss_pred HHHHHhcCccccCccchh-HHhhhHHHHHHHHHH
Q 003010 309 LAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLAA 341 (858)
Q Consensus 309 laHqWfGnlVt~~~w~d~-WLnEGfA~y~~~~~~ 341 (858)
++|--......+..-.+. =|||||+.+++..+.
T Consensus 164 ltHGVt~~~agL~Y~~eSGaLNEs~SDifG~~ve 197 (341)
T 2vqx_A 164 LAHGVTESEAGLIYFQQAGALNESLSDVFGSLVK 197 (341)
T ss_dssp HHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccceecccCCccccCCCcchhhHHHHHHHHHHH
Confidence 999766544333332333 489999999997654
No 21
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=61.76 E-value=41 Score=34.65 Aligned_cols=108 Identities=24% Similarity=0.248 Sum_probs=60.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCCC--cceeec---CCCCCccccccccceeeccc-ccccCCCChHHHHHHHHHHH
Q 003010 232 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAI---PDFAAGAMENYGLVTYRETA-LLYDDQHSAAANKQRVATVV 305 (858)
Q Consensus 232 ~~~~~l~~~~~~l~~~e~~fg~~yp~~k--ld~v~~---P~~~~gamEn~Gli~~~e~~-ll~~~~~~~~~~~~~~~~~i 305 (858)
.+..|...+.+..+||.+.|| .-++.- +.++.. ..--..|.=+...++|..-. ..+.+-. .-..++
T Consensus 62 aavdA~~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg~~y~NAfW~g~~m~fGDGdg~~f~~~~-------~slDVv 133 (304)
T 4ger_A 62 AGVDAHTYAAKTYDYYKAKFG-RNSIDGRGLQLRSTVHYGSRYNNAFWNGSQMTYGDGDGSTFIAFS-------GDPDVV 133 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEEEESSSCCCEEECSSCEEEECCCSSSBCCGG-------GSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeEEEEEeCCCCccCceecCCEEEEeCCCCccccccc-------cccchh
Confidence 455677788999999999999 556532 333322 11111233333344444421 1111110 124689
Q ss_pred HHHHHHHHhcCccccCccch-hHHhhhHHHHHHHHHHhhhCcchhH
Q 003010 306 AHELAHQWFGNLVTMEWWTH-LWLNEGFATWVSYLAADSLFPEWKI 350 (858)
Q Consensus 306 aHElaHqWfGnlVt~~~w~d-~WLnEGfA~y~~~~~~~~~~~~~~~ 350 (858)
+||+.|--.........-.+ -=|||+|+..+...+. .++|.+
T Consensus 134 aHEltHGVt~~ta~L~Y~~qsGaLNEs~SDifG~~ve---~~dWli 176 (304)
T 4ger_A 134 GHELTHGVTEYTSNLEYYGESGALNEAFSDVIGNDIQ---RKNWLV 176 (304)
T ss_dssp HHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH---CSSSEE
T ss_pred hhccccccccccCCccccCCccchhHHHHHHHHHHhc---cCCcee
Confidence 99999976554333322222 2489999999997765 345543
No 22
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=52.20 E-value=73 Score=32.76 Aligned_cols=99 Identities=15% Similarity=0.151 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCcceeecCCCC---CccccccccceeecccccccCCCChHHHHHHHHHHHHHHH
Q 003010 233 GKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFA---AGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHEL 309 (858)
Q Consensus 233 ~~~~l~~~~~~l~~~e~~fg~~yp~~kld~v~~P~~~---~gamEn~Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHEl 309 (858)
+..|.-.+.++.+||.++|| .-|+. ..++..-.+. ..|.=+...++|..-.-.+.+. . -..+++||+
T Consensus 74 ~~DAhy~a~~t~d~y~~~~g-r~~id-~~l~~~VHyg~~y~NAfWdg~~m~fGDG~~~~~~~-~-------slDVv~HE~ 143 (306)
T 3nqx_A 74 LNDAHFFGNVIFNMYNDWLG-TAPLS-FQLQMRVHYSSNYENAFWDGSAMTFGDGQNTFYPL-V-------SLDVSAHEV 143 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSS-SCEEEEEEESSSCCCEEECSSCEEEECCCSSBSCS-C-------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcC-CCCCC-CceEEEEecCCCccCccccCCEEEEeCCCcccccc-c-------ccchhhhhh
Confidence 44555577899999999999 55664 2333322221 1232233344444432111111 1 246899999
Q ss_pred HHHHhcCccccCc-cchhHHhhhHHHHHHHHHH
Q 003010 310 AHQWFGNLVTMEW-WTHLWLNEGFATWVSYLAA 341 (858)
Q Consensus 310 aHqWfGnlVt~~~-w~d~WLnEGfA~y~~~~~~ 341 (858)
.|--....-.+.. -.--=|||||+..++..+.
T Consensus 144 tHGvt~~~a~l~y~~esGaLnEs~SDifg~~ve 176 (306)
T 3nqx_A 144 SHGFTEQNSGLIYNGKPGGLNEAFSDMAGEAAE 176 (306)
T ss_dssp HHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCccCCCCCcccchHHHHHHHHHH
Confidence 9977654333222 1224589999999986543
No 23
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=41.36 E-value=31 Score=34.70 Aligned_cols=19 Identities=32% Similarity=0.448 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 003010 298 KQRVATVVAHELAHQWFGN 316 (858)
Q Consensus 298 ~~~~~~~iaHElaHqWfGn 316 (858)
...++.+||||++|-=-+.
T Consensus 97 ~~ELaaVLaHElgH~~~~H 115 (253)
T 3c37_A 97 ETELAGVLAHEINHAVARH 115 (253)
T ss_dssp HHHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHHHCcC
Confidence 4579999999999976544
No 24
>3iuk_A Uncharacterized protein; PF05960.1, DUF885, M32 carboxypeptidase-like fold, PSI, MCSG structural genomics, protein structure initiative; 1.85A {Arthrobacter aurescens}
Probab=30.13 E-value=76 Score=35.89 Aligned_cols=54 Identities=15% Similarity=0.164 Sum_probs=32.8
Q ss_pred hCHHHHHHHHHHHHHH------hccCCCChHHHHHHHHhccCCCHHHHHHHhhcCCCcce
Q 003010 406 LGAECFQRSLASYIKK------YACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPV 459 (858)
Q Consensus 406 lG~~~F~~~l~~yl~~------~~~~~~~~~df~~~l~~~sg~~l~~~~~~W~~~~G~P~ 459 (858)
+.++.-..-+.+|+.. |+.+.....++.+..++..|.+++.|-+.-+.....|+
T Consensus 495 ~~~~~a~~ev~Ry~~~Pgqa~sY~~G~~~i~~lR~~a~~~lGfdlk~FHd~vL~~G~~Pl 554 (562)
T 3iuk_A 495 ISEGQLQFEFTRYLGWPGQAPSYKVGQRLWEQIRAELESREGFDLKSFHSKALNIGSVGL 554 (562)
T ss_dssp CCHHHHHHHHHHHHHSTTSTTHHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHTTCSCCH
T ss_pred CChHHHHHHHHHHHcCCcHHhhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCCCCCH
Confidence 3455555667777641 22222334566666666678899988777666666664
No 25
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=28.90 E-value=21 Score=31.86 Aligned_cols=44 Identities=18% Similarity=0.151 Sum_probs=24.3
Q ss_pred cceeecccccccCCCChHHHHHHHHHHHHHHHHHHHhcCccccCccc
Q 003010 278 LVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWT 324 (858)
Q Consensus 278 li~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~~~w~ 324 (858)
+++|+...+-+-. +.......+..++.||+||.+ |.|-..+.|+
T Consensus 68 I~lYR~pi~~~~~--~~eeL~~~V~~tvvHEiaHhf-e~lag~~gls 111 (130)
T 2ejq_A 68 IALYYGSFLEVAG--EGFDWEAEVWETMLHELRHHL-ESLAGRDDLV 111 (130)
T ss_dssp EEEEHHHHHHHCC--TTCCHHHHHHHHHHHHHHHHH-HHHHTTC---
T ss_pred EEEehHHHHHHhC--ChhhHHHHHHHHHHHHhHHHH-HhhcccCCCC
Confidence 5566655222111 223345678999999999986 4444444443
No 26
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=26.04 E-value=51 Score=32.06 Aligned_cols=14 Identities=36% Similarity=0.584 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHH
Q 003010 300 RVATVVAHELAHQW 313 (858)
Q Consensus 300 ~~~~~iaHElaHqW 313 (858)
..+.++|||++|.+
T Consensus 135 ~~a~~~AHElGHnl 148 (214)
T 1r55_A 135 GAAATMAHEIGHSL 148 (214)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 46889999999986
No 27
>3o0y_A Lipoprotein; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, lipid protein; 1.70A {Colwellia psychrerythraea}
Probab=24.08 E-value=1.4e+02 Score=34.04 Aligned_cols=44 Identities=20% Similarity=0.335 Sum_probs=27.0
Q ss_pred HHHHHHHHHHH--HHHhc----CccccCcc-----chhHHhhhHHHHHHHHHHhhh
Q 003010 300 RVATVVAHELA--HQWFG----NLVTMEWW-----THLWLNEGFATWVSYLAADSL 344 (858)
Q Consensus 300 ~~~~~iaHEla--HqWfG----nlVt~~~w-----~d~WLnEGfA~y~~~~~~~~~ 344 (858)
.+..+++||-. |++=. ..-.+.+| ... ..||.|.|.+.+..+.-
T Consensus 431 ~l~tl~~HEg~PGHhlQ~~~~~~~~~~~~~R~~~~~~a-~~EGWAlYaE~l~~e~G 485 (609)
T 3o0y_A 431 GLKTLTYHEANPGHHWQIALNLDQAELPFLRRIAPYNA-YTEGWALYSEQVAYELG 485 (609)
T ss_dssp GHHHHHHHHSTTTHHHHHHHHHTCTTSCHHHHTCCCHH-HHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHhhccccHHHHHHHHHhcCCCCHHHHhccccc-ccChHHHHHHHHHHHhC
Confidence 46678999975 65421 11112222 222 37999999998887753
No 28
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=23.47 E-value=2.3e+02 Score=23.81 Aligned_cols=57 Identities=14% Similarity=0.140 Sum_probs=29.5
Q ss_pred CCEEEEEeCC-c--eEeEEEEEeccCCCCccccC------eeEEEec-CCeEEEEEeCCCcCCceEEEEEE
Q 003010 46 TKFIVLNAAD-L--TINNRSVSFTNKVSSKALEP------TKVELVE-ADEILVLEFAETLPTGMGVLAIG 106 (858)
Q Consensus 46 ~~~i~Lh~~~-l--~I~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~l~i~l~~~L~~g~~~l~i~ 106 (858)
...|.|...+ + ....+.+.+.++ ..+.. .....+. ....+.+.++ +|.+|.|+|.-.
T Consensus 18 P~~v~L~Fse~v~~~~s~v~v~~~~g---~~v~~~~~~~~~~~~~~~~~~~~~~~~l~-~L~~G~YtV~Wr 84 (102)
T 2c9r_A 18 PAKIELHFSENLVTQFSGAKLVMTAM---PGMEHSPMAVKAAVSGGGDPKTMVITPAS-PLTAGTYKVDWR 84 (102)
T ss_dssp CSCEEEEESSCCCGGGCEEEEEEEEC---C-----CEEECEEEEECSSTTEEEEEESS-CCCSEEEEEEEE
T ss_pred CCEEEEEeCCCCccCccEEEEECCCC---CeeeeccccccccceecCCCCcEEEEECC-CCCCceEEEEEE
Confidence 3455555432 2 345666654322 12222 3334443 3456777775 899999987543
No 29
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=22.90 E-value=81 Score=30.26 Aligned_cols=13 Identities=54% Similarity=0.808 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHH
Q 003010 301 VATVVAHELAHQW 313 (858)
Q Consensus 301 ~~~~iaHElaHqW 313 (858)
.+.++|||++|+.
T Consensus 135 ~a~~~AHElGH~l 147 (202)
T 1yp1_A 135 MAVVMAHELGHNL 147 (202)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 6889999999995
No 30
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=22.51 E-value=98 Score=29.63 Aligned_cols=14 Identities=50% Similarity=0.674 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 003010 300 RVATVVAHELAHQW 313 (858)
Q Consensus 300 ~~~~~iaHElaHqW 313 (858)
..+.++|||++|..
T Consensus 135 ~~a~~~AHElGH~l 148 (202)
T 2w15_A 135 WVAVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhc
Confidence 46889999999995
No 31
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=21.99 E-value=93 Score=29.67 Aligned_cols=14 Identities=50% Similarity=0.667 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHH
Q 003010 300 RVATVVAHELAHQW 313 (858)
Q Consensus 300 ~~~~~iaHElaHqW 313 (858)
..+.++|||++|++
T Consensus 132 ~~a~~~AHElGH~l 145 (197)
T 1bud_A 132 LVAITLAHEMAHNL 145 (197)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhc
Confidence 36889999999996
No 32
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=21.45 E-value=7.4e+02 Score=29.82 Aligned_cols=95 Identities=16% Similarity=0.181 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhhcCCCCCCCCchhhh-HhhheeeeccccCCHHHHHHHHHHHHcCCCHHH
Q 003010 659 ALLRGEIFTALA-LLGHKETLNEASKRFHAFLADRTTPLLPPDIRK-AAYVAVMQKVSASDRSGYESLLRVYRETDLSQE 736 (858)
Q Consensus 659 ~~lr~~i~~~ac-~~g~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~-~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~e 736 (858)
...|..++.++. .+|.++-+....+.+.. . -+|-+|. ++++.+|.-+-.|+....+.|++...+..+..-
T Consensus 523 ~vrR~aalgLGll~~g~~e~~~~li~~L~~---~-----~dp~vRygaa~alglAyaGTGn~~aIq~LL~~~~~d~~d~V 594 (963)
T 4ady_A 523 NITRGLAVGLALINYGRQELADDLITKMLA---S-----DESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAVSDSNDDV 594 (963)
T ss_dssp HHHHHHHHHHHHHTTTCGGGGHHHHHHHHH---C-----SCHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHCSCHHH
T ss_pred HHHHHHHHHHHhhhCCChHHHHHHHHHHHh---C-----CCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhccCCcHHH
Confidence 355666666654 45666554444444332 1 2355664 344444444456777777777777766666666
Q ss_pred HHHHHHHhCC--CCCHHHHHHHHHHHh
Q 003010 737 KTRILSSLAS--CPDVNIVLEVLNFLL 761 (858)
Q Consensus 737 k~~ll~aL~c--t~d~~ll~~~L~~~l 761 (858)
|+...-|||. ..+++.+.++++.+.
T Consensus 595 RraAViaLGlI~~g~~e~v~rlv~~L~ 621 (963)
T 4ady_A 595 RRAAVIALGFVLLRDYTTVPRIVQLLS 621 (963)
T ss_dssp HHHHHHHHHHHTSSSCSSHHHHTTTGG
T ss_pred HHHHHHHHHhhccCCHHHHHHHHHHHH
Confidence 7667777763 445555666665444
No 33
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=21.45 E-value=2.4e+02 Score=23.73 Aligned_cols=28 Identities=18% Similarity=0.234 Sum_probs=18.2
Q ss_pred eEEEec-CCeEEEEEeCCCcCCceEEEEEE
Q 003010 78 KVELVE-ADEILVLEFAETLPTGMGVLAIG 106 (858)
Q Consensus 78 ~~~~~~-~~~~l~i~l~~~L~~g~~~l~i~ 106 (858)
....+. ....+.+.++ +|.+|.|+|.-.
T Consensus 58 ~~~~~~~~~~~~~~~l~-~L~~G~YtV~Wr 86 (104)
T 1lyq_A 58 KVAPGADPKSMVIIPRE-PLPAGTYRVDWR 86 (104)
T ss_dssp EEEECSSTTEEEEEESS-CCCSEEEEEEEE
T ss_pred ceeecCCCCcEEEEECC-CCCCceEEEEEE
Confidence 334443 3456777776 899999987543
No 34
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=21.11 E-value=5.8e+02 Score=24.83 Aligned_cols=96 Identities=15% Similarity=0.142 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCCCHHHHH
Q 003010 659 ALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKT 738 (858)
Q Consensus 659 ~~lr~~i~~~ac~~g~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~s~~~~ek~ 738 (858)
...|..++...+..|.++.+... ...+.+ -++..|..+-.++.. +...+....+.+.+.. +..++.-|.
T Consensus 142 ~~vR~~a~~aL~~~~~~~~~~~L----~~~l~d-----~~~~vr~~a~~aL~~-~~~~~~~~~~~L~~~l-~d~~~~vR~ 210 (280)
T 1oyz_A 142 TNVRRATAFAISVINDKATIPLL----INLLKD-----PNGDVRNWAAFAINI-NKYDNSDIRDCFVEML-QDKNEEVRI 210 (280)
T ss_dssp HHHHHHHHHHHHTC---CCHHHH----HHHHTC-----SSHHHHHHHHHHHHH-HTCCCHHHHHHHHHHT-TCSCHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHH----HHHHcC-----CCHHHHHHHHHHHHh-hccCcHHHHHHHHHHh-cCCCHHHHH
Confidence 35677777778888876544333 333433 246677644333322 2223566677777665 445678888
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHhcCcc
Q 003010 739 RILSSLASCPDVNIVLEVLNFLLSSEV 765 (858)
Q Consensus 739 ~ll~aL~ct~d~~ll~~~L~~~l~~~i 765 (858)
..+.+|+...++..+..++..+-++.+
T Consensus 211 ~A~~aL~~~~~~~~~~~L~~~l~d~~v 237 (280)
T 1oyz_A 211 EAIIGLSYRKDKRVLSVLCDELKKNTV 237 (280)
T ss_dssp HHHHHHHHTTCGGGHHHHHHHHTSSSC
T ss_pred HHHHHHHHhCCHhhHHHHHHHhcCccH
Confidence 999999988888888888876654443
No 35
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=20.09 E-value=1.1e+02 Score=33.28 Aligned_cols=14 Identities=43% Similarity=0.620 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHH
Q 003010 300 RVATVVAHELAHQW 313 (858)
Q Consensus 300 ~~~~~iaHElaHqW 313 (858)
..+.++||||+|++
T Consensus 145 ~~a~t~AHElGHnl 158 (427)
T 2ero_A 145 LVAIAMAHEMGHNL 158 (427)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 46789999999997
No 36
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=20.07 E-value=55 Score=28.42 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=22.7
Q ss_pred ccceeecccccccCCCChHHHHHHHHHHHHHHHHHHH
Q 003010 277 GLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQW 313 (858)
Q Consensus 277 Gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 313 (858)
-+++||.. ++--- .+.......+..++.||+||..
T Consensus 68 rI~lYR~P-i~~~~-~~~~el~~~V~~vvvhEiahh~ 102 (114)
T 3e11_A 68 RIIIYRNT-ICALC-ETESEVIDEVRKTVVHEIAHHF 102 (114)
T ss_dssp EEEEEHHH-HHHTC-SSHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEehHH-HHHHh-CChhHHHHHHHHHHHHHHHHHc
Confidence 36667766 22211 2344456678899999999985
Done!