Query 003013
Match_columns 857
No_of_seqs 383 out of 4132
Neff 10.6
Searched_HMMs 13730
Date Mon Mar 25 10:06:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003013.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/003013hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omza2 c.10.2.1 (A:33-416) In 99.8 3.5E-17 2.6E-21 174.7 24.6 338 387-820 44-383 (384)
2 d2omza2 c.10.2.1 (A:33-416) In 99.7 6.6E-16 4.8E-20 164.6 24.5 321 354-750 42-382 (384)
3 d1jl5a_ c.10.2.6 (A:) Leucine 99.7 5.5E-14 4E-18 147.5 34.6 153 641-818 200-352 (353)
4 d2a5yb3 c.37.1.20 (B:109-385) 99.6 2.6E-17 1.9E-21 164.3 5.0 167 142-311 19-231 (277)
5 d1xkua_ c.10.2.7 (A:) Decorin 99.6 2.1E-14 1.5E-18 147.1 26.5 241 385-728 29-284 (305)
6 d1ogqa_ c.10.2.8 (A:) Polygala 99.6 1.4E-15 1E-19 156.6 10.9 248 387-728 50-303 (313)
7 d1ogqa_ c.10.2.8 (A:) Polygala 99.6 6.6E-15 4.8E-19 151.4 14.1 105 411-519 50-159 (313)
8 d1xkua_ c.10.2.7 (A:) Decorin 99.5 4.1E-13 3E-17 137.2 25.4 104 389-502 12-118 (305)
9 d1jl5a_ c.10.2.6 (A:) Leucine 99.5 1.1E-11 8.3E-16 129.4 31.2 25 755-780 316-340 (353)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.5 6.1E-13 4.4E-17 132.5 19.9 81 385-470 29-110 (266)
11 d1p9ag_ c.10.2.7 (G:) von Will 99.4 4.3E-12 3.1E-16 126.2 18.9 179 632-821 20-206 (266)
12 d1ozna_ c.10.2.7 (A:) Reticulo 99.4 1.6E-11 1.2E-15 123.5 20.8 64 641-704 173-236 (284)
13 d1ozna_ c.10.2.7 (A:) Reticulo 99.3 2.9E-11 2.1E-15 121.6 19.4 183 632-821 42-236 (284)
14 d1h6ua2 c.10.2.1 (A:36-262) In 99.3 2.8E-11 2E-15 117.1 15.9 57 641-701 169-225 (227)
15 d2astb2 c.10.1.3 (B:2136-2419) 99.2 1.1E-12 8E-17 131.6 4.0 91 430-523 42-135 (284)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.2 3.5E-11 2.6E-15 116.3 14.6 183 621-818 41-225 (227)
17 d2omxa2 c.10.2.1 (A:37-235) In 99.2 3.8E-11 2.8E-15 113.2 12.7 149 644-805 39-189 (199)
18 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.2 9.9E-11 7.2E-15 114.6 16.2 193 621-819 29-231 (242)
19 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.2 2E-10 1.5E-14 112.3 17.8 84 385-470 27-113 (242)
20 d1h6ta2 c.10.2.1 (A:31-240) In 99.2 3.8E-11 2.8E-15 114.2 11.1 163 644-819 45-209 (210)
21 d2omxa2 c.10.2.1 (A:37-235) In 99.2 1.7E-10 1.3E-14 108.5 15.5 161 354-536 38-198 (199)
22 d1h6ta2 c.10.2.1 (A:31-240) In 99.2 1.3E-10 9.5E-15 110.4 14.7 164 355-540 45-208 (210)
23 d2astb2 c.10.1.3 (B:2136-2419) 99.1 1.5E-12 1.1E-16 130.6 -0.7 176 621-797 46-235 (284)
24 d1a9na_ c.10.2.4 (A:) Spliceso 98.8 1.8E-09 1.3E-13 97.0 7.3 123 387-516 18-146 (162)
25 d1dcea3 c.10.2.2 (A:444-567) R 98.7 1E-08 7.4E-13 87.1 8.2 60 641-703 16-75 (124)
26 d1a9na_ c.10.2.4 (A:) Spliceso 98.7 4.5E-09 3.2E-13 94.3 6.1 106 641-750 14-121 (162)
27 d1dcea3 c.10.2.2 (A:444-567) R 98.7 1.7E-08 1.2E-12 85.7 9.2 95 390-492 1-99 (124)
28 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.7 3.6E-08 2.6E-12 91.6 11.3 121 671-798 10-137 (192)
29 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.6 1.7E-07 1.2E-11 86.9 12.4 115 632-750 18-135 (192)
30 d1m9la_ c.10.3.1 (A:) Outer ar 98.6 2E-10 1.4E-14 107.4 -8.1 126 389-520 25-151 (198)
31 d1m9la_ c.10.3.1 (A:) Outer ar 98.3 5.4E-10 4E-14 104.3 -12.5 91 633-727 36-126 (198)
32 d2ifga3 c.10.2.7 (A:36-191) Hi 98.3 2.3E-06 1.7E-10 75.5 10.8 65 685-750 23-89 (156)
33 d2ifga3 c.10.2.7 (A:36-191) Hi 98.2 4.6E-06 3.4E-10 73.5 10.5 102 695-821 10-114 (156)
34 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.1 3.1E-08 2.3E-12 106.8 -7.2 57 763-821 369-437 (460)
35 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.0 8.3E-08 6.1E-12 103.3 -4.7 15 352-366 23-37 (460)
36 d1fnna2 c.37.1.20 (A:1-276) CD 97.7 4.6E-05 3.4E-09 74.7 9.7 102 144-247 17-119 (276)
37 d2ca6a1 c.10.1.2 (A:2-345) Rna 97.6 3.7E-06 2.7E-10 86.0 -0.5 82 667-750 213-311 (344)
38 d1w5sa2 c.37.1.20 (A:7-293) CD 97.3 0.0002 1.5E-08 70.3 8.8 104 143-247 16-127 (287)
39 d1ixsb2 c.37.1.20 (B:4-242) Ho 97.1 0.00013 9.7E-09 69.4 3.9 51 142-193 8-58 (239)
40 d2fnaa2 c.37.1.20 (A:1-283) Ar 97.0 9.9E-05 7.2E-09 72.5 1.8 42 142-193 11-52 (283)
41 d1sxjc2 c.37.1.20 (C:12-238) R 96.9 0.00025 1.8E-08 66.8 4.4 46 142-193 13-58 (227)
42 d1in4a2 c.37.1.20 (A:17-254) H 96.8 0.00017 1.2E-08 68.6 2.0 51 142-193 8-58 (238)
43 d1sxjb2 c.37.1.20 (B:7-230) Re 96.8 0.00039 2.8E-08 65.2 4.5 46 142-193 14-59 (224)
44 d1jbka_ c.37.1.20 (A:) ClpB, A 96.8 0.0007 5.1E-08 60.2 5.5 57 144-206 23-83 (195)
45 d1sxjd2 c.37.1.20 (D:26-262) R 96.7 0.00058 4.2E-08 64.7 5.1 46 142-193 11-56 (237)
46 d1iqpa2 c.37.1.20 (A:2-232) Re 96.7 0.0005 3.6E-08 64.9 4.6 46 142-193 23-68 (231)
47 d2ca6a1 c.10.1.2 (A:2-345) Rna 96.7 0.00094 6.8E-08 67.4 6.9 11 575-585 302-312 (344)
48 d1sxje2 c.37.1.20 (E:4-255) Re 96.6 0.00042 3E-08 66.5 3.3 47 142-193 10-56 (252)
49 d1sxja2 c.37.1.20 (A:295-547) 96.6 0.00098 7.1E-08 63.8 5.5 51 142-193 13-75 (253)
50 d1r6bx2 c.37.1.20 (X:169-436) 96.3 0.0068 5E-07 57.1 9.3 78 144-227 19-108 (268)
51 d1qvra2 c.37.1.20 (A:149-535) 96.1 0.0023 1.7E-07 64.2 5.5 56 145-206 24-83 (387)
52 d1rz3a_ c.37.1.6 (A:) Hypothet 96.1 0.0043 3.1E-07 56.4 7.0 41 150-193 5-45 (198)
53 d1koha1 c.10.2.3 (A:201-362) m 96.1 0.0004 2.9E-08 61.1 -0.4 66 404-472 58-127 (162)
54 d1lw7a2 c.37.1.1 (A:220-411) T 96.0 0.0013 9.3E-08 59.6 3.0 25 169-193 6-30 (192)
55 d1np6a_ c.37.1.10 (A:) Molybdo 95.9 0.0017 1.3E-07 57.4 3.0 24 170-193 2-25 (170)
56 d1gvnb_ c.37.1.21 (B:) Plasmid 95.7 0.0043 3.2E-07 59.8 5.6 46 147-193 10-55 (273)
57 d1ly1a_ c.37.1.1 (A:) Polynucl 95.7 0.0024 1.7E-07 55.3 3.2 22 171-192 3-24 (152)
58 d1kaga_ c.37.1.2 (A:) Shikimat 95.6 0.0019 1.4E-07 56.8 2.3 23 171-193 3-25 (169)
59 d1ixza_ c.37.1.20 (A:) AAA dom 95.6 0.0045 3.3E-07 58.1 4.8 53 140-193 6-65 (247)
60 d2bdta1 c.37.1.25 (A:1-176) Hy 95.6 0.0028 2.1E-07 56.2 3.2 22 171-192 3-24 (176)
61 d1ofha_ c.37.1.20 (A:) HslU {H 95.5 0.0016 1.2E-07 63.9 1.3 49 145-193 16-72 (309)
62 d1m8pa3 c.37.1.15 (A:391-573) 95.5 0.004 2.9E-07 55.6 3.9 35 169-205 5-40 (183)
63 d1xjca_ c.37.1.10 (A:) Molybdo 95.3 0.0036 2.7E-07 54.9 3.0 23 171-193 2-24 (165)
64 d1e32a2 c.37.1.20 (A:201-458) 95.3 0.0055 4E-07 58.2 4.5 51 142-193 3-61 (258)
65 d1rkba_ c.37.1.1 (A:) Adenylat 95.3 0.0034 2.5E-07 55.6 2.7 22 171-192 5-26 (173)
66 d1viaa_ c.37.1.2 (A:) Shikimat 95.3 0.0035 2.6E-07 54.7 2.7 21 173-193 3-23 (161)
67 d2i3ba1 c.37.1.11 (A:1-189) Ca 95.3 0.0045 3.2E-07 55.6 3.5 23 171-193 2-24 (189)
68 d1njfa_ c.37.1.20 (A:) delta p 95.2 0.0076 5.6E-07 56.5 5.1 46 142-192 11-56 (239)
69 d1knqa_ c.37.1.17 (A:) Glucona 95.1 0.0064 4.6E-07 53.6 4.0 26 167-192 3-28 (171)
70 d1x6va3 c.37.1.4 (A:34-228) Ad 95.1 0.0058 4.2E-07 55.3 3.7 35 169-205 18-52 (195)
71 d1lv7a_ c.37.1.20 (A:) AAA dom 95.0 0.008 5.8E-07 56.6 4.6 52 142-193 11-68 (256)
72 d1qf9a_ c.37.1.1 (A:) UMP/CMP 95.0 0.0068 4.9E-07 54.8 3.8 25 169-193 5-29 (194)
73 d1y63a_ c.37.1.1 (A:) Probable 95.0 0.0065 4.7E-07 53.8 3.5 25 169-193 4-28 (174)
74 d2iyva1 c.37.1.2 (A:2-166) Shi 95.0 0.0049 3.6E-07 54.0 2.6 21 173-193 4-24 (165)
75 d1khta_ c.37.1.1 (A:) Adenylat 94.9 0.0052 3.8E-07 55.2 2.9 23 171-193 2-24 (190)
76 d1ukza_ c.37.1.1 (A:) Uridylat 94.7 0.0085 6.2E-07 54.2 3.7 26 168-193 6-31 (196)
77 d1l8qa2 c.37.1.20 (A:77-289) C 94.7 0.022 1.6E-06 51.9 6.6 61 142-208 10-72 (213)
78 d1e6ca_ c.37.1.2 (A:) Shikimat 94.6 0.0061 4.4E-07 53.7 2.3 22 172-193 4-25 (170)
79 d1bifa1 c.37.1.7 (A:37-249) 6- 94.6 0.0081 5.9E-07 55.2 3.2 24 170-193 2-25 (213)
80 d1cp2a_ c.37.1.10 (A:) Nitroge 94.5 0.0086 6.2E-07 57.5 3.2 23 171-193 2-24 (269)
81 d1d2na_ c.37.1.20 (A:) Hexamer 94.4 0.015 1.1E-06 54.5 4.7 47 144-193 10-63 (246)
82 d2qy9a2 c.37.1.10 (A:285-495) 94.4 0.042 3.1E-06 49.3 7.5 58 168-228 7-66 (211)
83 d1zp6a1 c.37.1.25 (A:6-181) Hy 94.3 0.012 9E-07 51.9 3.8 24 169-192 3-26 (176)
84 d1koha1 c.10.2.3 (A:201-362) m 94.3 0.0047 3.4E-07 53.9 0.8 58 387-445 65-126 (162)
85 d1qhxa_ c.37.1.3 (A:) Chloramp 94.3 0.01 7.4E-07 52.6 3.1 23 170-192 3-25 (178)
86 d1yj5a2 c.37.1.1 (A:351-522) 5 94.3 0.011 8.2E-07 51.9 3.3 25 168-192 12-36 (172)
87 d1r6bx3 c.37.1.20 (X:437-751) 94.2 0.027 2E-06 54.8 6.4 48 145-192 24-74 (315)
88 d1ye8a1 c.37.1.11 (A:1-178) Hy 94.1 0.01 7.5E-07 52.6 2.7 22 172-193 2-23 (178)
89 d1uj2a_ c.37.1.6 (A:) Uridine- 94.1 0.013 9.4E-07 53.8 3.4 24 170-193 2-25 (213)
90 d1uf9a_ c.37.1.1 (A:) Dephosph 93.9 0.016 1.1E-06 52.1 3.5 23 169-191 2-24 (191)
91 d1nksa_ c.37.1.1 (A:) Adenylat 93.9 0.014 1E-06 52.5 3.2 22 171-192 2-23 (194)
92 d1r7ra3 c.37.1.20 (A:471-735) 93.9 0.011 7.7E-07 56.3 2.4 52 141-193 5-64 (265)
93 d1sq5a_ c.37.1.6 (A:) Pantothe 93.8 0.019 1.4E-06 55.1 4.0 26 167-192 77-102 (308)
94 d2p67a1 c.37.1.10 (A:1-327) LA 93.7 0.052 3.8E-06 52.8 7.2 63 152-220 40-104 (327)
95 d1g8pa_ c.37.1.20 (A:) ATPase 93.5 0.015 1.1E-06 57.7 3.0 46 141-192 5-50 (333)
96 d2qm8a1 c.37.1.10 (A:5-327) Me 93.5 0.033 2.4E-06 54.2 5.4 39 151-193 36-74 (323)
97 d1ak2a1 c.37.1.1 (A:14-146,A:1 93.4 0.019 1.4E-06 51.5 3.3 23 169-192 3-25 (190)
98 d1ckea_ c.37.1.1 (A:) CMP kina 93.4 0.017 1.2E-06 53.5 3.0 43 170-225 3-45 (225)
99 d2vp4a1 c.37.1.1 (A:12-208) De 93.4 0.018 1.3E-06 52.0 3.1 26 167-192 6-31 (197)
100 d2afhe1 c.37.1.10 (E:1-289) Ni 93.2 0.02 1.4E-06 55.4 3.2 24 170-193 2-25 (289)
101 d1svia_ c.37.1.8 (A:) Probable 93.0 0.027 2E-06 50.6 3.7 28 166-193 19-46 (195)
102 d1teva_ c.37.1.1 (A:) UMP/CMP 92.9 0.025 1.8E-06 50.8 3.2 23 171-193 2-24 (194)
103 d1akya1 c.37.1.1 (A:3-130,A:16 92.9 0.026 1.9E-06 49.9 3.3 23 169-192 2-24 (180)
104 d1sgwa_ c.37.1.12 (A:) Putativ 92.6 0.023 1.7E-06 51.0 2.4 23 170-192 27-49 (200)
105 d1zaka1 c.37.1.1 (A:3-127,A:15 92.5 0.024 1.8E-06 50.7 2.5 23 171-193 4-26 (189)
106 d1ls1a2 c.37.1.10 (A:89-295) G 92.4 0.056 4.1E-06 48.5 4.8 56 169-227 9-66 (207)
107 d2ak3a1 c.37.1.1 (A:0-124,A:16 92.3 0.029 2.1E-06 50.1 2.7 24 169-192 5-28 (189)
108 d1m7ga_ c.37.1.4 (A:) Adenosin 92.3 0.037 2.7E-06 50.1 3.5 24 169-192 23-46 (208)
109 d1qvra3 c.37.1.20 (A:536-850) 92.2 0.048 3.5E-06 52.9 4.4 48 145-192 25-75 (315)
110 d1q3ta_ c.37.1.1 (A:) CMP kina 92.2 0.032 2.3E-06 51.4 3.0 45 171-228 4-48 (223)
111 d1zina1 c.37.1.1 (A:1-125,A:16 92.1 0.031 2.3E-06 49.5 2.7 20 173-192 3-22 (182)
112 d1odfa_ c.37.1.6 (A:) Hypothet 92.0 0.047 3.4E-06 51.6 3.9 27 167-193 24-50 (286)
113 d1ihua2 c.37.1.10 (A:308-586) 91.9 0.05 3.6E-06 52.1 4.2 36 152-193 8-43 (279)
114 d2cdna1 c.37.1.1 (A:1-181) Ade 91.8 0.035 2.5E-06 49.2 2.7 22 172-193 2-23 (181)
115 d1lvga_ c.37.1.1 (A:) Guanylat 91.7 0.034 2.5E-06 49.6 2.5 21 173-193 3-23 (190)
116 d1hyqa_ c.37.1.10 (A:) Cell di 91.7 0.042 3.1E-06 50.9 3.3 37 170-208 1-38 (232)
117 d3adka_ c.37.1.1 (A:) Adenylat 91.5 0.044 3.2E-06 49.1 3.1 24 169-192 7-30 (194)
118 d1l2ta_ c.37.1.12 (A:) MJ0796 91.5 0.048 3.5E-06 49.7 3.3 24 169-192 30-53 (230)
119 d1s3ga1 c.37.1.1 (A:1-125,A:16 91.5 0.043 3.1E-06 48.6 2.9 22 172-193 2-23 (182)
120 d1j8yf2 c.37.1.10 (F:87-297) G 91.5 0.09 6.5E-06 47.1 5.0 59 167-228 9-69 (211)
121 d1zj6a1 c.37.1.8 (A:2-178) ADP 91.5 0.085 6.2E-06 46.2 4.9 35 152-193 4-38 (177)
122 d1g2912 c.37.1.12 (1:1-240) Ma 91.4 0.046 3.3E-06 50.2 3.0 23 170-192 29-51 (240)
123 d1svma_ c.37.1.20 (A:) Papillo 91.4 0.072 5.3E-06 52.6 4.7 45 145-193 133-177 (362)
124 d1gkya_ c.37.1.1 (A:) Guanylat 91.3 0.042 3.1E-06 48.8 2.6 22 172-193 3-24 (186)
125 d3dhwc1 c.37.1.12 (C:1-240) Me 91.3 0.052 3.8E-06 49.8 3.3 25 169-193 30-54 (240)
126 d1znwa1 c.37.1.1 (A:20-201) Gu 91.3 0.046 3.4E-06 48.4 2.9 23 171-193 3-25 (182)
127 d1yrba1 c.37.1.10 (A:1-244) AT 91.3 0.046 3.3E-06 51.1 3.0 22 172-193 2-23 (244)
128 d1okkd2 c.37.1.10 (D:97-303) G 91.2 0.064 4.7E-06 48.0 3.7 58 169-228 5-63 (207)
129 d2ocpa1 c.37.1.1 (A:37-277) De 91.2 0.052 3.8E-06 50.6 3.3 25 169-193 1-25 (241)
130 d1v43a3 c.37.1.12 (A:7-245) Hy 91.2 0.056 4.1E-06 49.5 3.4 24 169-192 31-54 (239)
131 d1b0ua_ c.37.1.12 (A:) ATP-bin 91.1 0.055 4E-06 50.4 3.3 24 169-192 27-50 (258)
132 d2awna2 c.37.1.12 (A:4-235) Ma 91.1 0.058 4.3E-06 49.1 3.4 24 169-192 25-48 (232)
133 d3b60a1 c.37.1.12 (A:329-581) 91.1 0.049 3.6E-06 50.7 2.9 24 169-192 40-63 (253)
134 d1z06a1 c.37.1.8 (A:32-196) Ra 91.0 0.058 4.3E-06 46.7 3.3 23 171-193 3-25 (165)
135 d2pmka1 c.37.1.12 (A:467-707) 90.9 0.053 3.8E-06 50.0 2.9 23 170-192 29-51 (241)
136 d1upta_ c.37.1.8 (A:) ADP-ribo 90.9 0.052 3.8E-06 47.1 2.8 22 172-193 7-28 (169)
137 d1vhta_ c.37.1.1 (A:) Dephosph 90.8 0.058 4.3E-06 48.9 3.2 20 171-190 4-23 (208)
138 d1r8sa_ c.37.1.8 (A:) ADP-ribo 90.8 0.048 3.5E-06 46.9 2.4 21 173-193 3-23 (160)
139 d1kgda_ c.37.1.1 (A:) Guanylat 90.8 0.045 3.3E-06 48.1 2.2 22 171-192 4-25 (178)
140 d1vmaa2 c.37.1.10 (A:82-294) G 90.8 0.12 8.9E-06 46.3 5.2 57 168-227 9-67 (213)
141 d1r0wa_ c.37.1.12 (A:) Cystic 90.8 0.062 4.5E-06 50.9 3.3 25 169-193 61-85 (281)
142 d1p5zb_ c.37.1.1 (B:) Deoxycyt 90.8 0.041 3E-06 51.3 2.1 24 170-193 2-25 (241)
143 d1mv5a_ c.37.1.12 (A:) Multidr 90.7 0.069 5E-06 49.3 3.6 24 169-192 27-50 (242)
144 d1fzqa_ c.37.1.8 (A:) ADP-ribo 90.7 0.079 5.8E-06 46.4 3.9 23 171-193 17-39 (176)
145 d1jj7a_ c.37.1.12 (A:) Peptide 90.6 0.066 4.8E-06 49.8 3.3 24 169-192 39-62 (251)
146 d1g3qa_ c.37.1.10 (A:) Cell di 90.5 0.062 4.5E-06 49.8 3.2 36 171-208 3-39 (237)
147 d1nn5a_ c.37.1.1 (A:) Thymidyl 90.5 0.16 1.2E-05 45.8 5.9 23 171-193 4-26 (209)
148 d1mkya1 c.37.1.8 (A:2-172) Pro 90.5 0.067 4.9E-06 46.7 3.1 21 172-192 2-22 (171)
149 d1a7ja_ c.37.1.6 (A:) Phosphor 90.3 0.046 3.4E-06 51.5 1.9 24 169-192 3-26 (288)
150 d2onka1 c.37.1.12 (A:1-240) Mo 90.3 0.068 5E-06 48.8 3.1 22 171-192 25-46 (240)
151 d1pgva_ c.10.1.1 (A:) Tropomod 90.3 0.094 6.8E-06 45.4 3.9 35 716-750 72-109 (167)
152 d1e4va1 c.37.1.1 (A:1-121,A:15 90.3 0.061 4.4E-06 47.4 2.7 22 172-193 2-23 (179)
153 d2gjsa1 c.37.1.8 (A:91-258) Ra 90.2 0.082 5.9E-06 45.9 3.5 23 171-193 2-24 (168)
154 d1udxa2 c.37.1.8 (A:157-336) O 90.2 0.049 3.6E-06 48.1 2.0 20 173-192 4-23 (180)
155 d1wf3a1 c.37.1.8 (A:3-180) GTP 90.2 0.08 5.8E-06 46.5 3.4 25 169-193 4-28 (178)
156 d1ksha_ c.37.1.8 (A:) ADP-ribo 90.0 0.071 5.2E-06 46.1 2.9 22 172-193 4-25 (165)
157 d2erxa1 c.37.1.8 (A:6-176) di- 89.9 0.074 5.4E-06 46.3 3.0 22 172-193 4-25 (171)
158 d3d31a2 c.37.1.12 (A:1-229) Su 89.9 0.072 5.2E-06 48.4 2.8 24 169-192 25-48 (229)
159 d1vpla_ c.37.1.12 (A:) Putativ 89.8 0.084 6.1E-06 48.5 3.3 25 169-193 27-51 (238)
160 d1ny5a2 c.37.1.20 (A:138-384) 89.8 0.093 6.7E-06 48.8 3.6 46 144-193 1-46 (247)
161 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 89.8 0.12 9.1E-06 45.4 4.4 25 169-193 12-36 (186)
162 d2a5ja1 c.37.1.8 (A:9-181) Rab 89.7 0.075 5.5E-06 46.4 2.8 22 172-193 5-26 (173)
163 d1egaa1 c.37.1.8 (A:4-182) GTP 89.7 0.086 6.2E-06 46.3 3.2 24 170-193 5-28 (179)
164 d1szpa2 c.37.1.11 (A:145-395) 89.6 0.16 1.2E-05 47.2 5.4 50 169-218 33-86 (251)
165 d1z2aa1 c.37.1.8 (A:8-171) Rab 89.6 0.083 6E-06 45.6 2.9 20 173-192 5-24 (164)
166 d1ji0a_ c.37.1.12 (A:) Branche 89.6 0.08 5.8E-06 48.8 2.9 24 170-193 32-55 (240)
167 d1tf7a2 c.37.1.11 (A:256-497) 89.5 0.13 9.6E-06 47.7 4.6 40 169-210 25-64 (242)
168 d3raba_ c.37.1.8 (A:) Rab3a {R 89.5 0.08 5.8E-06 46.0 2.8 23 171-193 6-28 (169)
169 d1yzqa1 c.37.1.8 (A:14-177) Ra 89.5 0.079 5.8E-06 45.8 2.8 22 172-193 2-23 (164)
170 d1z0fa1 c.37.1.8 (A:8-173) Rab 89.5 0.081 5.9E-06 45.8 2.8 23 171-193 5-27 (166)
171 d1z0ja1 c.37.1.8 (A:2-168) Rab 89.4 0.089 6.5E-06 45.6 3.0 22 172-193 6-27 (167)
172 d1a5ta2 c.37.1.20 (A:1-207) de 89.4 0.19 1.4E-05 45.2 5.4 41 147-192 6-46 (207)
173 d2ew1a1 c.37.1.8 (A:4-174) Rab 89.2 0.086 6.3E-06 45.9 2.8 24 170-193 5-28 (171)
174 d1g6ha_ c.37.1.12 (A:) MJ1267 89.0 0.092 6.7E-06 48.9 2.9 24 170-193 30-53 (254)
175 d1ihua1 c.37.1.10 (A:1-296) Ar 89.0 0.097 7.1E-06 50.4 3.3 25 169-193 7-31 (296)
176 d1gsia_ c.37.1.1 (A:) Thymidyl 89.0 0.093 6.8E-06 47.4 2.9 22 172-193 2-23 (208)
177 d1um8a_ c.37.1.20 (A:) ClpX {H 88.9 0.13 9.2E-06 50.9 4.0 49 144-192 18-90 (364)
178 d1jjva_ c.37.1.1 (A:) Dephosph 88.8 0.11 7.7E-06 46.9 3.2 21 171-191 3-23 (205)
179 d1z08a1 c.37.1.8 (A:17-183) Ra 88.8 0.096 7E-06 45.4 2.8 22 172-193 5-26 (167)
180 d2bmea1 c.37.1.8 (A:6-179) Rab 88.8 0.095 6.9E-06 45.8 2.8 22 171-192 6-27 (174)
181 d1tmka_ c.37.1.1 (A:) Thymidyl 88.7 0.23 1.6E-05 44.9 5.4 25 169-193 2-26 (214)
182 d1oxxk2 c.37.1.12 (K:1-242) Gl 88.7 0.078 5.7E-06 48.5 2.1 24 169-192 30-53 (242)
183 d1r2qa_ c.37.1.8 (A:) Rab5a {H 88.6 0.1 7.3E-06 45.4 2.8 22 172-193 8-29 (170)
184 d2bv3a2 c.37.1.8 (A:7-282) Elo 88.5 0.096 7E-06 49.2 2.7 25 168-192 4-28 (276)
185 d1puia_ c.37.1.8 (A:) Probable 88.4 0.084 6.1E-06 46.7 2.2 27 167-193 13-39 (188)
186 d2erya1 c.37.1.8 (A:10-180) r- 88.3 0.11 7.8E-06 45.2 2.8 23 171-193 6-28 (171)
187 d2fn4a1 c.37.1.8 (A:24-196) r- 88.3 0.11 7.9E-06 45.3 2.8 25 169-193 5-29 (173)
188 d1s96a_ c.37.1.1 (A:) Guanylat 88.2 0.11 8.1E-06 46.6 2.9 23 171-193 3-25 (205)
189 d1ky3a_ c.37.1.8 (A:) Rab-rela 88.2 0.12 8.6E-06 45.2 3.0 22 172-193 4-25 (175)
190 d1pzna2 c.37.1.11 (A:96-349) D 88.1 0.31 2.3E-05 45.3 6.3 50 169-218 35-88 (254)
191 d2f7sa1 c.37.1.8 (A:5-190) Rab 88.1 0.12 8.7E-06 45.7 3.0 23 171-193 6-28 (186)
192 d1g16a_ c.37.1.8 (A:) Rab-rela 88.0 0.11 8.3E-06 44.8 2.8 22 172-193 4-25 (166)
193 d1ctqa_ c.37.1.8 (A:) cH-p21 R 88.0 0.11 8.3E-06 44.8 2.8 22 172-193 5-26 (166)
194 d1kaoa_ c.37.1.8 (A:) Rap2a {H 88.0 0.12 8.5E-06 44.8 2.8 23 171-193 4-26 (167)
195 d2cxxa1 c.37.1.8 (A:2-185) GTP 87.9 0.12 8.7E-06 45.5 2.9 22 172-193 2-23 (184)
196 d2qtvb1 c.37.1.8 (B:24-189) SA 87.8 0.12 8.6E-06 44.4 2.7 22 172-193 2-23 (166)
197 d1c1ya_ c.37.1.8 (A:) Rap1A {H 87.7 0.12 9E-06 44.6 2.8 22 172-193 5-26 (167)
198 d1lnza2 c.37.1.8 (A:158-342) O 87.7 0.09 6.5E-06 46.5 1.8 22 172-193 3-24 (185)
199 d1l7vc_ c.37.1.12 (C:) ABC tra 87.6 0.1 7.5E-06 47.8 2.2 24 169-192 24-47 (231)
200 d1xtqa1 c.37.1.8 (A:3-169) GTP 87.6 0.13 9.1E-06 44.6 2.8 24 170-193 4-27 (167)
201 d2atva1 c.37.1.8 (A:5-172) Ras 87.6 0.13 9.3E-06 44.6 2.8 21 173-193 5-25 (168)
202 d1mkya2 c.37.1.8 (A:173-358) P 87.5 0.13 9.5E-06 45.4 2.9 23 171-193 9-31 (186)
203 d1u0la2 c.37.1.8 (A:69-293) Pr 87.5 0.21 1.6E-05 44.9 4.3 35 150-193 84-118 (225)
204 d2fh5b1 c.37.1.8 (B:63-269) Si 87.5 0.13 9.7E-06 46.3 3.0 23 171-193 1-23 (207)
205 d2bcgy1 c.37.1.8 (Y:3-196) GTP 87.5 0.14 1E-05 45.7 3.0 24 170-193 6-29 (194)
206 d2f9la1 c.37.1.8 (A:8-182) Rab 87.4 0.13 9.5E-06 44.9 2.8 23 171-193 5-27 (175)
207 d1x3sa1 c.37.1.8 (A:2-178) Rab 87.3 0.14 9.9E-06 44.9 2.8 21 173-193 10-30 (177)
208 d1svsa1 c.37.1.8 (A:32-60,A:18 87.2 0.13 9.6E-06 45.7 2.7 21 172-192 4-24 (195)
209 d1zcba2 c.37.1.8 (A:47-75,A:20 87.2 0.13 9.7E-06 45.9 2.7 19 172-190 4-22 (200)
210 d1htwa_ c.37.1.18 (A:) Hypothe 87.1 0.25 1.8E-05 41.6 4.1 26 169-194 32-57 (158)
211 d2hyda1 c.37.1.12 (A:324-578) 86.9 0.1 7.4E-06 48.5 1.7 24 169-192 43-66 (255)
212 d1v5wa_ c.37.1.11 (A:) Meiotic 86.9 0.43 3.1E-05 44.3 6.5 49 168-216 35-87 (258)
213 d2atxa1 c.37.1.8 (A:9-193) Rho 86.9 0.14 1E-05 45.1 2.8 24 170-193 9-32 (185)
214 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 86.8 0.17 1.2E-05 44.2 3.2 22 172-193 4-25 (177)
215 d1zd9a1 c.37.1.8 (A:18-181) AD 86.8 0.15 1.1E-05 43.8 2.8 22 172-193 4-25 (164)
216 d1nija1 c.37.1.10 (A:2-223) Hy 86.7 0.17 1.2E-05 46.1 3.1 25 169-193 2-26 (222)
217 d1mh1a_ c.37.1.8 (A:) Rac {Hum 86.6 0.15 1.1E-05 44.8 2.8 23 171-193 6-28 (183)
218 d4tmka_ c.37.1.1 (A:) Thymidyl 86.6 0.41 3E-05 43.0 5.9 36 171-207 3-38 (210)
219 d1nrjb_ c.37.1.8 (B:) Signal r 86.5 0.16 1.2E-05 45.7 3.0 23 171-193 4-26 (209)
220 d2g3ya1 c.37.1.8 (A:73-244) GT 86.5 0.16 1.2E-05 44.0 2.9 22 171-192 4-25 (172)
221 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 86.4 0.16 1.2E-05 44.0 2.8 22 172-193 5-26 (170)
222 d1u8za_ c.37.1.8 (A:) Ras-rela 86.3 0.2 1.4E-05 43.3 3.3 24 170-193 4-27 (168)
223 d2bmja1 c.37.1.8 (A:66-240) Ce 86.2 0.17 1.2E-05 44.1 2.8 23 171-193 6-28 (175)
224 d1e0sa_ c.37.1.8 (A:) ADP-ribo 86.1 0.27 2E-05 42.6 4.2 24 169-193 12-35 (173)
225 d1pgva_ c.10.1.1 (A:) Tropomod 86.1 0.22 1.6E-05 42.9 3.5 35 387-421 15-54 (167)
226 d1i2ma_ c.37.1.8 (A:) Ran {Hum 86.1 0.11 8.2E-06 45.1 1.5 22 172-193 5-26 (170)
227 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 86.0 0.17 1.2E-05 44.5 2.8 22 172-193 4-25 (184)
228 d2gj8a1 c.37.1.8 (A:216-376) P 86.0 0.18 1.3E-05 43.1 2.9 22 172-193 3-24 (161)
229 d2dy1a2 c.37.1.8 (A:8-274) Elo 85.9 0.19 1.4E-05 47.0 3.1 22 170-191 2-23 (267)
230 d2g6ba1 c.37.1.8 (A:58-227) Ra 85.8 0.18 1.3E-05 43.7 2.8 24 170-193 6-29 (170)
231 d1g41a_ c.37.1.20 (A:) HslU {H 85.7 0.35 2.5E-05 48.9 5.2 49 144-192 15-71 (443)
232 d1deka_ c.37.1.1 (A:) Deoxynuc 85.5 0.21 1.5E-05 46.3 3.2 22 171-192 2-23 (241)
233 d1x1ra1 c.37.1.8 (A:10-178) Ra 85.5 0.21 1.5E-05 43.2 3.0 23 171-193 5-27 (169)
234 d1moza_ c.37.1.8 (A:) ADP-ribo 85.4 0.15 1.1E-05 44.8 2.0 24 170-193 17-40 (182)
235 d1m7ba_ c.37.1.8 (A:) RhoE (RN 85.3 0.2 1.4E-05 43.9 2.8 22 172-193 4-25 (179)
236 d1io0a_ c.10.1.1 (A:) Tropomod 84.9 0.13 9.7E-06 44.4 1.4 14 353-366 14-27 (166)
237 d2gnoa2 c.37.1.20 (A:11-208) g 84.9 0.76 5.5E-05 40.6 6.6 58 169-227 14-73 (198)
238 d1wmsa_ c.37.1.8 (A:) Rab9a {H 84.5 0.23 1.7E-05 43.2 2.8 24 169-192 5-28 (174)
239 d2jdid3 c.37.1.11 (D:82-357) C 84.4 0.58 4.2E-05 43.4 5.7 65 154-224 57-122 (276)
240 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 83.9 0.23 1.7E-05 44.1 2.7 21 172-192 4-24 (200)
241 d1xzpa2 c.37.1.8 (A:212-371) T 83.8 0.11 7.7E-06 44.7 0.2 22 172-193 2-23 (160)
242 d1xp8a1 c.37.1.11 (A:15-282) R 83.8 0.54 3.9E-05 43.7 5.2 54 169-229 56-109 (268)
243 d2ngra_ c.37.1.8 (A:) CDC42 {H 83.4 0.26 1.9E-05 43.6 2.8 22 172-193 5-26 (191)
244 d1n0wa_ c.37.1.11 (A:) DNA rep 83.2 0.22 1.6E-05 45.4 2.3 25 169-193 22-46 (242)
245 d1h65a_ c.37.1.8 (A:) Chloropl 83.0 0.61 4.4E-05 43.3 5.3 40 150-193 16-55 (257)
246 d1azta2 c.37.1.8 (A:35-65,A:20 83.0 0.27 2E-05 44.7 2.7 23 170-192 6-28 (221)
247 d1xpua3 c.37.1.11 (A:129-417) 82.8 0.43 3.2E-05 44.6 4.1 47 154-206 32-78 (289)
248 d2fu5c1 c.37.1.8 (C:3-175) Rab 82.7 0.19 1.4E-05 43.6 1.5 23 170-192 6-28 (173)
249 d1mo6a1 c.37.1.11 (A:1-269) Re 82.5 0.69 5.1E-05 42.9 5.4 47 168-216 58-104 (269)
250 d1w44a_ c.37.1.11 (A:) NTPase 82.4 0.31 2.3E-05 46.6 3.0 22 171-192 124-145 (321)
251 d1byia_ c.37.1.10 (A:) Dethiob 82.3 0.33 2.4E-05 44.0 3.1 23 171-193 2-25 (224)
252 d1g7sa4 c.37.1.8 (A:1-227) Ini 82.2 0.32 2.3E-05 44.3 2.9 22 171-192 6-27 (227)
253 d1p6xa_ c.37.1.1 (A:) Thymidin 82.2 0.54 3.9E-05 45.3 4.6 25 169-193 5-29 (333)
254 d1io0a_ c.10.1.1 (A:) Tropomod 82.0 0.24 1.8E-05 42.6 1.9 35 387-421 17-56 (166)
255 d1n0ua2 c.37.1.8 (A:3-343) Elo 81.3 0.41 3E-05 46.3 3.4 24 169-192 16-39 (341)
256 d1u94a1 c.37.1.11 (A:6-268) Re 81.0 0.89 6.5E-05 42.1 5.6 53 169-228 53-105 (263)
257 d1w36d1 c.37.1.19 (D:2-360) Ex 80.5 0.92 6.7E-05 44.3 5.8 35 149-192 151-185 (359)
258 d2c78a3 c.37.1.8 (A:9-212) Elo 80.3 0.4 2.9E-05 42.8 2.7 19 173-191 6-24 (204)
259 d1nlfa_ c.37.1.11 (A:) Hexamer 79.8 0.41 3E-05 45.1 2.8 22 171-192 30-51 (274)
260 d2i1qa2 c.37.1.11 (A:65-322) D 78.5 0.52 3.8E-05 43.5 3.2 25 169-193 33-57 (258)
261 d1f5na2 c.37.1.8 (A:7-283) Int 77.5 1 7.5E-05 42.0 4.9 26 168-193 30-55 (277)
262 d1wb1a4 c.37.1.8 (A:1-179) Elo 77.2 0.56 4.1E-05 40.8 2.7 21 172-192 7-27 (179)
263 d1jala1 c.37.1.8 (A:1-278) Ych 76.3 0.58 4.3E-05 44.1 2.7 22 172-193 4-25 (278)
264 d1cr2a_ c.37.1.11 (A:) Gene 4 75.7 1.4 0.0001 41.3 5.4 56 170-228 35-90 (277)
265 d1osna_ c.37.1.1 (A:) Thymidin 75.7 0.86 6.3E-05 43.7 3.8 24 170-193 5-28 (331)
266 d1e2ka_ c.37.1.1 (A:) Thymidin 75.2 0.64 4.6E-05 44.5 2.7 25 169-193 3-27 (329)
267 d1tf7a1 c.37.1.11 (A:14-255) C 74.7 0.7 5.1E-05 42.2 2.8 24 169-192 25-49 (242)
268 d1g6oa_ c.37.1.11 (A:) Hexamer 73.3 0.82 6E-05 43.9 2.9 21 172-192 168-188 (323)
269 g1f2t.1 c.37.1.12 (A:,B:) Rad5 73.2 0.96 7E-05 42.7 3.5 21 171-191 24-44 (292)
270 d1ni3a1 c.37.1.8 (A:11-306) Yc 73.1 0.76 5.5E-05 43.7 2.7 22 172-193 12-33 (296)
271 d1d2ea3 c.37.1.8 (A:55-250) El 71.6 0.95 6.9E-05 39.8 2.7 19 173-191 6-24 (196)
272 d1kkma_ c.91.1.2 (A:) HPr kina 71.0 1 7.6E-05 38.4 2.7 22 171-192 15-36 (176)
273 d1tuea_ c.37.1.20 (A:) Replica 69.9 1.9 0.00014 37.4 4.1 36 152-192 40-75 (205)
274 d1fx0a3 c.37.1.11 (A:97-372) C 69.8 1.4 9.9E-05 40.9 3.5 40 171-212 68-107 (276)
275 d1knxa2 c.91.1.2 (A:133-309) H 69.4 1.2 8.8E-05 38.0 2.8 22 171-192 16-37 (177)
276 d1t9ha2 c.37.1.8 (A:68-298) Pr 69.3 0.59 4.3E-05 42.0 0.8 22 172-193 99-120 (231)
277 d1u0ja_ c.37.1.20 (A:) Rep 40 67.9 2.5 0.00018 39.0 5.0 25 168-192 102-126 (267)
278 d1qhla_ c.37.1.12 (A:) Cell di 67.6 0.55 4E-05 41.9 0.2 21 172-192 26-46 (222)
279 d1jnya3 c.37.1.8 (A:4-227) Elo 67.5 1.3 9.2E-05 40.0 2.7 21 172-192 5-25 (224)
280 d1puja_ c.37.1.8 (A:) Probable 66.5 1.4 0.0001 41.0 3.0 25 169-193 111-135 (273)
281 d1ko7a2 c.91.1.2 (A:130-298) H 66.4 1.5 0.00011 37.2 2.7 22 171-192 16-37 (169)
282 d1zunb3 c.37.1.8 (B:16-237) Su 65.9 1.6 0.00012 39.1 3.1 25 168-192 7-31 (222)
283 d1wxqa1 c.37.1.8 (A:1-319) GTP 65.0 1.4 0.0001 42.3 2.7 21 173-193 3-23 (319)
284 d1tq4a_ c.37.1.8 (A:) Interfer 65.0 1.7 0.00013 43.1 3.4 23 170-192 56-78 (400)
285 g1ii8.1 c.37.1.12 (A:,B:) Rad5 64.7 1.7 0.00012 42.3 3.3 21 171-191 24-44 (369)
286 d1kk1a3 c.37.1.8 (A:6-200) Ini 63.5 1.7 0.00012 38.0 2.7 21 172-192 7-27 (195)
287 d1p3da1 c.5.1.1 (A:11-106) UDP 61.0 2.8 0.0002 31.5 3.1 25 168-192 6-30 (96)
288 g1xew.1 c.37.1.12 (X:,Y:) Smc 60.4 1.9 0.00014 41.5 2.7 21 171-191 27-47 (329)
289 d2qn6a3 c.37.1.8 (A:2-206) Ini 59.7 2.2 0.00016 37.7 2.7 21 172-192 10-30 (205)
290 d1r5ba3 c.37.1.8 (A:215-459) E 58.0 1.9 0.00014 39.3 2.0 21 171-191 24-45 (245)
291 d1f60a3 c.37.1.8 (A:2-240) Elo 57.5 2.5 0.00018 38.3 2.7 21 172-192 8-28 (239)
292 d2jdia3 c.37.1.11 (A:95-379) C 56.7 4.7 0.00034 37.3 4.5 65 154-223 57-128 (285)
293 d1a1va1 c.37.1.14 (A:190-325) 55.9 7.6 0.00055 31.0 5.4 37 169-211 7-43 (136)
294 d1p9ra_ c.37.1.11 (A:) Extrace 54.6 5.8 0.00042 39.0 5.2 39 147-192 141-180 (401)
295 d1sc6a1 c.2.1.4 (A:108-295) Ph 51.7 3.8 0.00028 35.4 2.8 31 170-208 44-74 (188)
296 d1uaaa1 c.37.1.19 (A:2-307) DE 50.3 2.4 0.00018 40.1 1.5 15 173-187 17-31 (306)
297 d1j4aa1 c.2.1.4 (A:104-300) D- 49.2 4.3 0.00031 35.3 2.8 29 171-207 44-72 (197)
298 d1pjra1 c.37.1.19 (A:1-318) DE 48.6 3.7 0.00027 39.0 2.5 16 173-188 27-42 (318)
299 d2olra1 c.91.1.1 (A:228-540) P 43.6 6 0.00044 36.8 2.9 18 171-188 15-32 (313)
300 d1e69a_ c.37.1.12 (A:) Smc hea 43.1 5 0.00037 37.8 2.5 21 171-191 25-45 (308)
301 d2eyqa3 c.37.1.19 (A:546-778) 42.9 21 0.0015 31.6 6.5 40 147-192 59-98 (233)
302 d1j3ba1 c.91.1.1 (A:212-529) P 42.2 6 0.00044 36.9 2.7 18 171-188 15-32 (318)
303 d1ygya1 c.2.1.4 (A:99-282) Pho 41.0 7.5 0.00055 33.2 3.0 31 170-208 44-74 (184)
304 d2naca1 c.2.1.4 (A:148-335) Fo 40.5 13 0.00092 31.8 4.5 33 169-209 43-75 (188)
305 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 39.6 6.6 0.00048 28.8 2.0 20 173-192 4-23 (89)
306 d1ii2a1 c.91.1.1 (A:201-523) P 38.7 7.9 0.00057 36.1 2.9 17 172-188 16-32 (323)
307 d1gdha1 c.2.1.4 (A:101-291) D- 38.0 16 0.0012 31.2 4.7 31 170-208 47-77 (191)
308 d1e9ra_ c.37.1.11 (A:) Bacteri 37.9 7.2 0.00052 38.8 2.8 22 171-192 51-72 (433)
309 d1nvmb1 c.2.1.3 (B:1-131,B:287 36.9 9.2 0.00067 31.6 2.8 20 171-190 5-24 (157)
310 d2jfga1 c.5.1.1 (A:1-93) UDP-N 36.9 5.4 0.00039 29.5 1.2 21 171-192 6-26 (93)
311 d1dxya1 c.2.1.4 (A:101-299) D- 36.6 8.9 0.00065 33.2 2.8 29 171-207 46-74 (199)
312 d1t2da1 c.2.1.5 (A:1-150) Lact 35.3 5.9 0.00043 32.5 1.3 21 171-192 4-24 (150)
313 d1etea_ a.26.1.2 (A:) Flt3 lig 35.0 22 0.0016 26.4 4.3 64 20-109 51-116 (134)
314 d1mx3a1 c.2.1.4 (A:126-318) Tr 34.0 8.7 0.00063 33.1 2.2 31 171-209 50-80 (193)
315 d1w1wa_ c.37.1.12 (A:) Smc hea 33.4 9.7 0.00071 37.5 2.9 20 172-191 27-46 (427)
316 d1pzga1 c.2.1.5 (A:14-163) Lac 29.3 10 0.00075 31.1 1.8 23 169-192 6-28 (154)
317 d1o5za2 c.72.2.2 (A:-2-293) Fo 26.6 21 0.0015 33.0 3.8 36 152-193 29-64 (296)
318 d1q0qa2 c.2.1.3 (A:1-125,A:275 26.3 39 0.0028 27.2 4.9 47 171-224 2-49 (151)
319 d1qp8a1 c.2.1.4 (A:83-263) Put 26.0 9.9 0.00072 32.3 1.1 16 171-186 43-58 (181)
320 d1r0ka2 c.2.1.3 (A:3-126,A:265 25.2 41 0.003 27.1 4.9 50 170-227 2-52 (150)
321 d2fz4a1 c.37.1.19 (A:24-229) D 24.3 77 0.0056 26.8 7.1 50 145-209 69-118 (206)
322 d2gc6a2 c.72.2.2 (A:1-296) Fol 24.1 19 0.0014 33.3 3.0 36 152-193 25-60 (296)
323 d1wb9a2 c.37.1.12 (A:567-800) 23.7 24 0.0017 31.2 3.4 23 170-192 41-63 (234)
324 d2akab1 c.37.1.8 (B:6-304) Dyn 23.5 46 0.0034 30.4 5.8 25 169-193 25-49 (299)
325 d2p6ra3 c.37.1.19 (A:1-202) He 23.5 19 0.0014 31.0 2.6 17 173-189 43-59 (202)
326 d1yksa1 c.37.1.14 (A:185-324) 23.5 19 0.0014 28.2 2.5 19 171-189 8-26 (140)
327 d1g8fa3 c.37.1.15 (A:390-511) 23.4 23 0.0017 27.3 2.7 23 170-192 6-28 (122)
328 d1e8ca3 c.72.2.1 (A:104-337) U 22.9 18 0.0013 31.8 2.5 24 168-193 3-26 (234)
329 d2dt5a2 c.2.1.12 (A:78-203) Tr 22.6 20 0.0014 28.1 2.3 34 171-209 4-37 (126)
330 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 20.4 20 0.0015 37.3 2.5 17 173-189 27-43 (623)
No 1
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75 E-value=3.5e-17 Score=174.65 Aligned_cols=338 Identities=15% Similarity=0.172 Sum_probs=175.2
Q ss_pred CCceEEEccCCCCCCcchhhhCCCCCCcEEeEcCCCCCCcCCCCCCCCCcceeeccccccccccchhhhcCCCCCccEEE
Q 003013 387 CRLRFLELSYCQGLTKLPQALLTLCSLTDMKILGCASLVSFPEVALPSQLRTVRIQECNALKSLPEAWMYNSNSSLESLK 466 (857)
Q Consensus 387 ~~L~~L~L~~~~~l~~lp~~~~~l~~L~~L~l~~~~~l~~~~~~~~l~~L~~L~l~~~~~l~~l~~~~~~~~l~~L~~L~ 466 (857)
.+|++|+++++ .++.+ .++..+++|++|++++| .++.++.++.+++|++|++++|. +..++. + ..+++|+.|+
T Consensus 44 ~~l~~L~l~~~-~I~~l-~gl~~L~nL~~L~Ls~N-~l~~l~~l~~L~~L~~L~L~~n~-i~~i~~-l--~~l~~L~~L~ 116 (384)
T d2omza2 44 DQVTTLQADRL-GIKSI-DGVEYLNNLTQINFSNN-QLTDITPLKNLTKLVDILMNNNQ-IADITP-L--ANLTNLTGLT 116 (384)
T ss_dssp TTCCEEECCSS-CCCCC-TTGGGCTTCCEEECCSS-CCCCCGGGTTCTTCCEEECCSSC-CCCCGG-G--TTCTTCCEEE
T ss_pred CCCCEEECCCC-CCCCc-cccccCCCCCEEeCcCC-cCCCCccccCCcccccccccccc-cccccc-c--cccccccccc
Confidence 67788888775 34555 35677788888888876 56677767777788888887776 555554 2 2277777777
Q ss_pred EecCCCCCCCCCCCCCCCccEEeccccccccccChhhhccCCCCccEEEecCCCCCcccccccCCCcccEEeeccCCCch
Q 003013 467 IRSCNSLVSFPEIALPSQLRTVRIQECNALKSLPEAWMHNSNSSLESLEIRSCDSLTYIARIQLPPSLKRLIVSDCCNLR 546 (857)
Q Consensus 467 l~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~lp~~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~~~L~~L~l~~~~~l~ 546 (857)
+.++ ....++.......+..+....+ .+..+....... ........... ..... ................
T Consensus 117 ~~~~-~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~-~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~--- 186 (384)
T d2omza2 117 LFNN-QITDIDPLKNLTNLNRLELSSN-TISDISALSGLT-SLQQLSFGNQV-TDLKP---LANLTTLERLDISSNK--- 186 (384)
T ss_dssp CCSS-CCCCCGGGTTCTTCSEEEEEEE-EECCCGGGTTCT-TCSEEEEEESC-CCCGG---GTTCTTCCEEECCSSC---
T ss_pred cccc-cccccccccccccccccccccc-cccccccccccc-ccccccccccc-chhhh---hccccccccccccccc---
Confidence 7654 3334433333444444444332 111111111110 01111111111 11110 0011111111000000
Q ss_pred hhcccccccccCCCCCCccccCCCCCCCCCccEEEEeCCCCccccccCCCchhhHHHHHhhcCchhhhhhccCCCCccee
Q 003013 547 TLMAEQDICSSSRGCTSLTSFSSENDLPATLEHLEVSSCSNLAFLSRNGNLPRALKYLVSLCSKLESLAERLDNTSLEGI 626 (857)
Q Consensus 547 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~L~~l 626 (857)
.........+++++.+.+.++
T Consensus 187 ------------------~~~~~~~~~l~~~~~l~l~~n----------------------------------------- 207 (384)
T d2omza2 187 ------------------VSDISVLAKLTNLESLIATNN----------------------------------------- 207 (384)
T ss_dssp ------------------CCCCGGGGGCTTCSEEECCSS-----------------------------------------
T ss_pred ------------------cccccccccccccceeeccCC-----------------------------------------
Confidence 000000002234555555443
Q ss_pred eccCcCCccccCcCCCCCCCCCeEEeecCCCCcccCCCCCCCCCcceEeeccccCcccCcccCCCCCCccEEeecCCCCC
Q 003013 627 FIYELENLKSLPAGLHNLHHLQKISIADCPNLESFPEEGLPSTKLTELSIRECENLKALPNCMHNLTSLLNLEIRRCPSV 706 (857)
Q Consensus 627 ~l~~~~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~~l 706 (857)
.+..++. ....++|+.|++++| .++.++ .+..+++|+.|++++|. +..++. +..+++|++|+++++ .+
T Consensus 208 ------~i~~~~~-~~~~~~L~~L~l~~n-~l~~~~-~l~~l~~L~~L~l~~n~-l~~~~~-~~~~~~L~~L~l~~~-~l 275 (384)
T d2omza2 208 ------QISDITP-LGILTNLDELSLNGN-QLKDIG-TLASLTNLTDLDLANNQ-ISNLAP-LSGLTKLTELKLGAN-QI 275 (384)
T ss_dssp ------CCCCCGG-GGGCTTCCEEECCSS-CCCCCG-GGGGCTTCSEEECCSSC-CCCCGG-GTTCTTCSEEECCSS-CC
T ss_pred ------ccCCCCc-ccccCCCCEEECCCC-CCCCcc-hhhcccccchhccccCc-cCCCCc-ccccccCCEeeccCc-cc
Confidence 1222221 233566666666665 344443 23345667777776654 444443 556667777777665 33
Q ss_pred cccCCCCCCCCCCeEEecCCCCcccccccccCCCCCccEeEEcCCCCCCCCCCC--CCCCCCeEecCCCCCCcccCCCCC
Q 003013 707 VSFPEDGFPTNLKSLKVHDLKISKALLEWGSNRFTSLRKLEIWGPCPDLVSPPP--FPASLTELWISFMPDLECLSSIGE 784 (857)
Q Consensus 707 ~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~l~~~~~--~~~~L~~L~l~~~~~l~~l~~~~~ 784 (857)
..++....++.++.+.+..|.... +. .+..++++++|++++ +++..+++ .+++|++|++++| +++.++ ...
T Consensus 276 ~~~~~~~~~~~l~~l~~~~n~l~~-~~--~~~~~~~l~~L~ls~--n~l~~l~~l~~l~~L~~L~L~~n-~l~~l~-~l~ 348 (384)
T d2omza2 276 SNISPLAGLTALTNLELNENQLED-IS--PISNLKNLTYLTLYF--NNISDISPVSSLTKLQRLFFANN-KVSDVS-SLA 348 (384)
T ss_dssp CCCGGGTTCTTCSEEECCSSCCSC-CG--GGGGCTTCSEEECCS--SCCSCCGGGGGCTTCCEEECCSS-CCCCCG-GGG
T ss_pred CCCCcccccccccccccccccccc-cc--ccchhcccCeEECCC--CCCCCCcccccCCCCCEEECCCC-CCCCCh-hHc
Confidence 444433344566666666665432 11 345566777777775 24454442 5677777777775 677776 456
Q ss_pred CccccCceeccCCCCCCCCCCCCccccccceeecCC
Q 003013 785 NLTSLKTLRLSYCRKLTYFSKEGLPKSLLRLYINHC 820 (857)
Q Consensus 785 ~l~~L~~L~l~~c~~l~~ip~~~l~~~L~~L~i~~c 820 (857)
.+++|++|++++| .++.++.-.-.++|+.|+++++
T Consensus 349 ~l~~L~~L~l~~N-~l~~l~~l~~l~~L~~L~L~~N 383 (384)
T d2omza2 349 NLTNINWLSAGHN-QISDLTPLANLTRITQLGLNDQ 383 (384)
T ss_dssp GCTTCCEEECCSS-CCCBCGGGTTCTTCSEEECCCE
T ss_pred CCCCCCEEECCCC-cCCCChhhccCCCCCEeeCCCC
Confidence 7888888888887 6666654222258888888763
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.70 E-value=6.6e-16 Score=164.62 Aligned_cols=321 Identities=18% Similarity=0.187 Sum_probs=172.5
Q ss_pred cCCCCCeEeccCCCCcccccccccccCCCCCCCCCceEEEccCCCCCCcchhhhCCCCCCcEEeEcCCCCCCcCCCCCCC
Q 003013 354 DIISLNRLQIKGCPRLLSLVTEEEHDHQQPELPCRLRFLELSYCQGLTKLPQALLTLCSLTDMKILGCASLVSFPEVALP 433 (857)
Q Consensus 354 ~~~~L~~L~l~~~~~l~~l~~~~~~~~~i~~l~~~L~~L~L~~~~~l~~lp~~~~~l~~L~~L~l~~~~~l~~~~~~~~l 433 (857)
.+.+|+.|+++++ ++..+ ..++.+ ++|++|++++| .++.+|. ++.+++|++|++++| .+..++.++.+
T Consensus 42 ~l~~l~~L~l~~~-~I~~l-------~gl~~L-~nL~~L~Ls~N-~l~~l~~-l~~L~~L~~L~L~~n-~i~~i~~l~~l 109 (384)
T d2omza2 42 DLDQVTTLQADRL-GIKSI-------DGVEYL-NNLTQINFSNN-QLTDITP-LKNLTKLVDILMNNN-QIADITPLANL 109 (384)
T ss_dssp HHTTCCEEECCSS-CCCCC-------TTGGGC-TTCCEEECCSS-CCCCCGG-GTTCTTCCEEECCSS-CCCCCGGGTTC
T ss_pred HhCCCCEEECCCC-CCCCc-------cccccC-CCCCEEeCcCC-cCCCCcc-ccCCccccccccccc-ccccccccccc
Confidence 3445666666664 23332 123344 66777777765 3455553 666777777777666 45555556666
Q ss_pred CCcceeeccccccccccchhhhcCCCCCccEEEEecCCCC--------------------CCCCCCCCCCCccEEecccc
Q 003013 434 SQLRTVRIQECNALKSLPEAWMYNSNSSLESLKIRSCNSL--------------------VSFPEIALPSQLRTVRIQEC 493 (857)
Q Consensus 434 ~~L~~L~l~~~~~l~~l~~~~~~~~l~~L~~L~l~~~~~~--------------------~~~~~~~~~~~L~~L~l~~~ 493 (857)
++|+.|++.++. +..++.... ...+..+....+... ...................+
T Consensus 110 ~~L~~L~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (384)
T d2omza2 110 TNLTGLTLFNNQ-ITDIDPLKN---LTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSN 185 (384)
T ss_dssp TTCCEEECCSSC-CCCCGGGTT---CTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSS
T ss_pred cccccccccccc-ccccccccc---cccccccccccccccccccccccccccccccccccchhhhhcccccccccccccc
Confidence 777777766554 444433322 233333333221100 00000111111222222111
Q ss_pred ccccccChhhhccCCCCccEEEecCCCCCcccccccCCCcccEEeeccCCCchhhcccccccccCCCCCCccccCCCCCC
Q 003013 494 NALKSLPEAWMHNSNSSLESLEIRSCDSLTYIARIQLPPSLKRLIVSDCCNLRTLMAEQDICSSSRGCTSLTSFSSENDL 573 (857)
Q Consensus 494 ~~l~~lp~~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 573 (857)
. ...+... ..+++++.+.++++ .++.+.+....++++.|.++++. ++.+. .+. .
T Consensus 186 ~--~~~~~~~--~~l~~~~~l~l~~n-~i~~~~~~~~~~~L~~L~l~~n~-l~~~~----------------~l~----~ 239 (384)
T d2omza2 186 K--VSDISVL--AKLTNLESLIATNN-QISDITPLGILTNLDELSLNGNQ-LKDIG----------------TLA----S 239 (384)
T ss_dssp C--CCCCGGG--GGCTTCSEEECCSS-CCCCCGGGGGCTTCCEEECCSSC-CCCCG----------------GGG----G
T ss_pred c--ccccccc--ccccccceeeccCC-ccCCCCcccccCCCCEEECCCCC-CCCcc----------------hhh----c
Confidence 1 1111111 12466677766663 34444445555666666665542 11110 111 2
Q ss_pred CCCccEEEEeCCCCccccccCCCchhhHHHHHhhcCchhhhhhccCCCCcceeeccCcCCccccCcCCCCCCCCCeEEee
Q 003013 574 PATLEHLEVSSCSNLAFLSRNGNLPRALKYLVSLCSKLESLAERLDNTSLEGIFIYELENLKSLPAGLHNLHHLQKISIA 653 (857)
Q Consensus 574 ~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~L~~l~l~~~~~l~~l~~~~~~l~~L~~L~l~ 653 (857)
+++|+.|++.++. ++.+.. .....+|+.+++.+ ..+..++. +..++.++.+.+.
T Consensus 240 l~~L~~L~l~~n~-l~~~~~-----------------------~~~~~~L~~L~l~~-~~l~~~~~-~~~~~~l~~l~~~ 293 (384)
T d2omza2 240 LTNLTDLDLANNQ-ISNLAP-----------------------LSGLTKLTELKLGA-NQISNISP-LAGLTALTNLELN 293 (384)
T ss_dssp CTTCSEEECCSSC-CCCCGG-----------------------GTTCTTCSEEECCS-SCCCCCGG-GTTCTTCSEEECC
T ss_pred ccccchhccccCc-cCCCCc-----------------------ccccccCCEeeccC-cccCCCCc-ccccccccccccc
Confidence 2466677666652 221111 11123455555554 33444443 5567888888888
Q ss_pred cCCCCcccCCCCCCCCCcceEeeccccCcccCcccCCCCCCccEEeecCCCCCcccCCCCCCCCCCeEEecCCCCccccc
Q 003013 654 DCPNLESFPEEGLPSTKLTELSIRECENLKALPNCMHNLTSLLNLEIRRCPSVVSFPEDGFPTNLKSLKVHDLKISKALL 733 (857)
Q Consensus 654 ~c~~l~~l~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~ 733 (857)
.+ .+..++ ....+++++.|+++++ .++.++. +..+++|++|++++| .++.++....+++|++|++++|.... ++
T Consensus 294 ~n-~l~~~~-~~~~~~~l~~L~ls~n-~l~~l~~-l~~l~~L~~L~L~~n-~l~~l~~l~~l~~L~~L~l~~N~l~~-l~ 367 (384)
T d2omza2 294 EN-QLEDIS-PISNLKNLTYLTLYFN-NISDISP-VSSLTKLQRLFFANN-KVSDVSSLANLTNINWLSAGHNQISD-LT 367 (384)
T ss_dssp SS-CCSCCG-GGGGCTTCSEEECCSS-CCSCCGG-GGGCTTCCEEECCSS-CCCCCGGGGGCTTCCEEECCSSCCCB-CG
T ss_pred cc-cccccc-ccchhcccCeEECCCC-CCCCCcc-cccCCCCCEEECCCC-CCCCChhHcCCCCCCEEECCCCcCCC-Ch
Confidence 76 344433 2445678889999886 4666653 778899999999988 56666644556889999998886543 32
Q ss_pred ccccCCCCCccEeEEcC
Q 003013 734 EWGSNRFTSLRKLEIWG 750 (857)
Q Consensus 734 ~~~~~~l~~L~~L~l~~ 750 (857)
.+.++++|++|+|++
T Consensus 368 --~l~~l~~L~~L~L~~ 382 (384)
T d2omza2 368 --PLANLTRITQLGLND 382 (384)
T ss_dssp --GGTTCTTCSEEECCC
T ss_pred --hhccCCCCCEeeCCC
Confidence 367889999999876
No 3
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.67 E-value=5.5e-14 Score=147.51 Aligned_cols=153 Identities=28% Similarity=0.395 Sum_probs=96.4
Q ss_pred CCCCCCCCeEEeecCCCCcccCCCCCCCCCcceEeeccccCcccCcccCCCCCCccEEeecCCCCCcccCCCCCCCCCCe
Q 003013 641 LHNLHHLQKISIADCPNLESFPEEGLPSTKLTELSIRECENLKALPNCMHNLTSLLNLEIRRCPSVVSFPEDGFPTNLKS 720 (857)
Q Consensus 641 ~~~l~~L~~L~l~~c~~l~~l~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~~~L~~ 720 (857)
...++.|+.+.++++. ...++.. ..++..+.+.++. +...+. ..+++....+..+. ...++. .+.....
T Consensus 200 ~~~l~~L~~l~l~~n~-~~~~~~~---~~~l~~~~~~~~~-~~~~~~---~~~~l~~~~~~~~~-~~~l~~--l~~~~~~ 268 (353)
T d1jl5a_ 200 LQNLPFLTTIYADNNL-LKTLPDL---PPSLEALNVRDNY-LTDLPE---LPQSLTFLDVSENI-FSGLSE--LPPNLYY 268 (353)
T ss_dssp CTTCTTCCEEECCSSC-CSSCCSC---CTTCCEEECCSSC-CSCCCC---CCTTCCEEECCSSC-CSEESC--CCTTCCE
T ss_pred cccccccccccccccc-ccccccc---ccccccccccccc-cccccc---cccccccccccccc-cccccc--ccchhcc
Confidence 3457778888887763 3334322 2356666666543 222222 23455555554331 222221 2234445
Q ss_pred EEecCCCCcccccccccCCCCCccEeEEcCCCCCCCCCCCCCCCCCeEecCCCCCCcccCCCCCCccccCceeccCCCCC
Q 003013 721 LKVHDLKISKALLEWGSNRFTSLRKLEIWGPCPDLVSPPPFPASLTELWISFMPDLECLSSIGENLTSLKTLRLSYCRKL 800 (857)
Q Consensus 721 L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~l~~~~~~l~~L~~L~l~~c~~l 800 (857)
.++..+.... ....+++|++|++++ +.+..+|..+++|+.|++++ ++++++|. .+++|++|++++|+ +
T Consensus 269 ~~~~~~~~~~-----~~~~~~~L~~L~Ls~--N~l~~lp~~~~~L~~L~L~~-N~L~~l~~---~~~~L~~L~L~~N~-L 336 (353)
T d1jl5a_ 269 LNASSNEIRS-----LCDLPPSLEELNVSN--NKLIELPALPPRLERLIASF-NHLAEVPE---LPQNLKQLHVEYNP-L 336 (353)
T ss_dssp EECCSSCCSE-----ECCCCTTCCEEECCS--SCCSCCCCCCTTCCEEECCS-SCCSCCCC---CCTTCCEEECCSSC-C
T ss_pred cccccCcccc-----ccccCCCCCEEECCC--CccCccccccCCCCEEECCC-CcCCcccc---ccCCCCEEECcCCc-C
Confidence 5555443321 123467899999987 36788888889999999988 47888883 45789999999995 8
Q ss_pred CCCCCCCccccccceeec
Q 003013 801 TYFSKEGLPKSLLRLYIN 818 (857)
Q Consensus 801 ~~ip~~~l~~~L~~L~i~ 818 (857)
+.+|+ +|.+|+.|.+.
T Consensus 337 ~~lp~--~~~~L~~L~~~ 352 (353)
T d1jl5a_ 337 REFPD--IPESVEDLRMN 352 (353)
T ss_dssp SSCCC--CCTTCCEEECC
T ss_pred CCCCc--cccccCeeECc
Confidence 99987 78889988774
No 4
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=99.64 E-value=2.6e-17 Score=164.28 Aligned_cols=167 Identities=14% Similarity=0.083 Sum_probs=107.8
Q ss_pred CCeeecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcccc--hhccCCceEEEEeCCCCCHHHHHH
Q 003013 142 EAKVYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYNDDR--VQRHYEIKAWTCVSEDFDVFGVSK 219 (857)
Q Consensus 142 ~~~~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~~~--~~~~Fd~~~wv~vs~~~~~~~i~~ 219 (857)
...++||+.++++|+++|... .+.+..+|+||||||+||||||++|||+.. .+.+|+.++||++++.++...+..
T Consensus 19 ~~~~~gR~~~~~~i~~~L~~~---~~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~~~~~f~~~~Wv~vs~~~~~~~l~~ 95 (277)
T d2a5yb3 19 QMTCYIREYHVDRVIKKLDEM---CDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFDL 95 (277)
T ss_dssp CCCSCCCHHHHHHHHHHHHHH---TTSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEEECCCCSTTHHHHH
T ss_pred CCceeCcHHHHHHHHHHHHhc---cCCCceEEEEECCCCCCHHHHHHHHHHhhhhhhhhcCceEEEEEecCCCCHHHHHH
Confidence 344889999999999999764 334789999999999999999999999744 677899999999999998887777
Q ss_pred HHHHHc---cCCCCC------CCCChHHHHHHHHhhc-----------ccc--cccc-CCCCcccc--------------
Q 003013 220 FILNSI---AKDQSN------NDDDLNSLQVKLKERL-----------EWE--EWIP-CGAGQEVD-------------- 262 (857)
Q Consensus 220 ~i~~~l---~~~~~~------~~~~~~~~~~~l~~~l-----------~w~--~w~~-~~~~~~i~-------------- 262 (857)
.+...+ +..... ........+..+.+.+ +|+ .|.. ...|+++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~kr~LlVLDDv~~~~~~~~~~~~~srilvTTR~~~v~~~~~~ 175 (277)
T d2a5yb3 96 FTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQEETIRWAQELRLRCLVTTRDVEISNAASQ 175 (277)
T ss_dssp HHHHHHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCHHHHHHHHHTTCEEEEEESBGGGGGGCCS
T ss_pred HHHHHHHHhcchhhcCCccchhhhhHHHHHHHHHHHhccCCeeEecchhhHHhhhhhhcccCceEEEEeehHHHHHhcCC
Confidence 665543 222110 1122233333444444 342 1211 12233331
Q ss_pred -ccccccceeeccccchhhcC--Cc----hhcccccchhcccccchhhhccCCCCc
Q 003013 263 -EVFPKLRRLSLHRCDKLQGT--LP----KRLLLLDTLYITSCDQLLMTIQCLPAL 311 (857)
Q Consensus 263 -~~~~~L~~l~~~~c~~l~~~--lp----~~l~~L~~l~~~~c~~l~~~~~~l~~l 311 (857)
.....++.|..+.++.++.. ++ .....+..-.+..|+|+|+++..+++.
T Consensus 176 ~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~iv~~c~GlPLAl~~ig~~ 231 (277)
T d2a5yb3 176 TCEFIEVTSLEIDECYDFLEAYGMPMPVGEKEEDVLNKTIELSSGNPATLMMFFKS 231 (277)
T ss_dssp CEEEEECCCCCHHHHHHHHHHTSCCCC--CHHHHHHHHHHHHHTTCHHHHHHHHTT
T ss_pred CCceEECCCCCHHHHHHHHHHHhCCccCchhhHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 01224556666677666521 11 222334455688999999999776543
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.64 E-value=2.1e-14 Score=147.07 Aligned_cols=241 Identities=16% Similarity=0.233 Sum_probs=138.9
Q ss_pred CCCCceEEEccCCCCCCcchh-hhCCCCCCcEEeEcCCCCCCcCCC-CCCCCCcceeeccccccccccchhhhcCCCCCc
Q 003013 385 LPCRLRFLELSYCQGLTKLPQ-ALLTLCSLTDMKILGCASLVSFPE-VALPSQLRTVRIQECNALKSLPEAWMYNSNSSL 462 (857)
Q Consensus 385 l~~~L~~L~L~~~~~l~~lp~-~~~~l~~L~~L~l~~~~~l~~~~~-~~~l~~L~~L~l~~~~~l~~l~~~~~~~~l~~L 462 (857)
+|+++++|+|++| .++.+|. ++..+++|++|++++|......|. +..+++|++|+++++. ++.+|... ...+
T Consensus 29 l~~~l~~L~Ls~N-~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~-l~~l~~~~----~~~l 102 (305)
T d1xkua_ 29 LPPDTALLDLQNN-KITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ-LKELPEKM----PKTL 102 (305)
T ss_dssp CCTTCCEEECCSS-CCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC-CSBCCSSC----CTTC
T ss_pred CCCCCCEEECcCC-cCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCc-cCcCccch----hhhh
Confidence 4467777777776 4566664 567777777777777643333232 5557777777777765 66666542 4456
Q ss_pred cEEEEecCCCCCCCCC--CCCCCCccEEecccccccc--ccChhhhccCCCCccEEEecCCCCCcccccccCCCcccEEe
Q 003013 463 ESLKIRSCNSLVSFPE--IALPSQLRTVRIQECNALK--SLPEAWMHNSNSSLESLEIRSCDSLTYIARIQLPPSLKRLI 538 (857)
Q Consensus 463 ~~L~l~~~~~~~~~~~--~~~~~~L~~L~l~~~~~l~--~lp~~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~~~L~~L~ 538 (857)
+.|.+..+ .+..++. ......+..+....+.... ..+..+ ..+++|+.+++.++. +.
T Consensus 103 ~~L~~~~n-~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~--~~l~~L~~l~l~~n~-l~--------------- 163 (305)
T d1xkua_ 103 QELRVHEN-EITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAF--QGMKKLSYIRIADTN-IT--------------- 163 (305)
T ss_dssp CEEECCSS-CCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGG--GGCTTCCEEECCSSC-CC---------------
T ss_pred hhhhcccc-chhhhhhhhhhccccccccccccccccccCCCcccc--ccccccCccccccCC-cc---------------
Confidence 66666553 2233321 1233344444443322111 111111 113445555554431 11
Q ss_pred eccCCCchhhcccccccccCCCCCCccccCCCCCCCCCccEEEEeCCCCccccccCCCchhhHHHHHhhcCchhhhhhcc
Q 003013 539 VSDCCNLRTLMAEQDICSSSRGCTSLTSFSSENDLPATLEHLEVSSCSNLAFLSRNGNLPRALKYLVSLCSKLESLAERL 618 (857)
Q Consensus 539 l~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 618 (857)
.++. ..+++|++|++.++
T Consensus 164 ---------------------------~l~~--~~~~~L~~L~l~~n--------------------------------- 181 (305)
T d1xkua_ 164 ---------------------------TIPQ--GLPPSLTELHLDGN--------------------------------- 181 (305)
T ss_dssp ---------------------------SCCS--SCCTTCSEEECTTS---------------------------------
T ss_pred ---------------------------ccCc--ccCCccCEEECCCC---------------------------------
Confidence 1110 02345666666554
Q ss_pred CCCCcceeeccCcCCccccCcCCCCCCCCCeEEeecCCCCcccCC-CCCCCCCcceEeeccccCcccCcccCCCCCCccE
Q 003013 619 DNTSLEGIFIYELENLKSLPAGLHNLHHLQKISIADCPNLESFPE-EGLPSTKLTELSIRECENLKALPNCMHNLTSLLN 697 (857)
Q Consensus 619 ~~~~L~~l~l~~~~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~~-~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~ 697 (857)
......+..+..++.+++|++++| .+..++. .+..+++|++|++++| .++.+|.++..+++|++
T Consensus 182 -------------~~~~~~~~~~~~~~~l~~L~~s~n-~l~~~~~~~~~~l~~L~~L~L~~N-~L~~lp~~l~~l~~L~~ 246 (305)
T d1xkua_ 182 -------------KITKVDAASLKGLNNLAKLGLSFN-SISAVDNGSLANTPHLRELHLNNN-KLVKVPGGLADHKYIQV 246 (305)
T ss_dssp -------------CCCEECTGGGTTCTTCCEEECCSS-CCCEECTTTGGGSTTCCEEECCSS-CCSSCCTTTTTCSSCCE
T ss_pred -------------cCCCCChhHhhccccccccccccc-cccccccccccccccceeeecccc-cccccccccccccCCCE
Confidence 222233445667788888988887 5555544 4456788999999987 57788888888999999
Q ss_pred EeecCCCCCcccCCCC--------CCCCCCeEEecCCCC
Q 003013 698 LEIRRCPSVVSFPEDG--------FPTNLKSLKVHDLKI 728 (857)
Q Consensus 698 L~l~~c~~l~~l~~~~--------~~~~L~~L~l~~~~~ 728 (857)
|++++| .++.++... .+++|+.|++++|+.
T Consensus 247 L~Ls~N-~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~ 284 (305)
T d1xkua_ 247 VYLHNN-NISAIGSNDFCPPGYNTKKASYSGVSLFSNPV 284 (305)
T ss_dssp EECCSS-CCCCCCTTSSSCSSCCTTSCCCSEEECCSSSS
T ss_pred EECCCC-ccCccChhhccCcchhcccCCCCEEECCCCcC
Confidence 999987 577765432 235677777777664
No 6
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.59 E-value=1.4e-15 Score=156.57 Aligned_cols=248 Identities=21% Similarity=0.199 Sum_probs=151.4
Q ss_pred CCceEEEccCCCCCC--cchhhhCCCCCCcEEeEcCCCCCC-cCC-CCCCCCCcceeeccccccccccchhhhcCCCCCc
Q 003013 387 CRLRFLELSYCQGLT--KLPQALLTLCSLTDMKILGCASLV-SFP-EVALPSQLRTVRIQECNALKSLPEAWMYNSNSSL 462 (857)
Q Consensus 387 ~~L~~L~L~~~~~l~--~lp~~~~~l~~L~~L~l~~~~~l~-~~~-~~~~l~~L~~L~l~~~~~l~~l~~~~~~~~l~~L 462 (857)
.+++.|+|+++.... .+|..++++++|++|+|++|+.+. .+| .++.+++|++|+++++......+..+.. +.+|
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~--~~~L 127 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQ--IKTL 127 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGG--CTTC
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccc--hhhh
Confidence 457788888764433 577888888888888888744443 565 4777888888888877632333333444 7777
Q ss_pred cEEEEecCCCCCCCC-CCCCCCCccEEeccccccccccChhhhccCCCCc-cEEEecCCCCCcccccccCCCcccEEeec
Q 003013 463 ESLKIRSCNSLVSFP-EIALPSQLRTVRIQECNALKSLPEAWMHNSNSSL-ESLEIRSCDSLTYIARIQLPPSLKRLIVS 540 (857)
Q Consensus 463 ~~L~l~~~~~~~~~~-~~~~~~~L~~L~l~~~~~l~~lp~~~~~~~l~~L-~~L~l~~c~~l~~l~~~~~~~~L~~L~l~ 540 (857)
+.++++++.....+| .+..++.|+.++++++.....+|..+.. +.++ +.+.++++ .+... .+..+.
T Consensus 128 ~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~--l~~l~~~l~~~~n-~l~~~----~~~~~~----- 195 (313)
T d1ogqa_ 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS--FSKLFTSMTISRN-RLTGK----IPPTFA----- 195 (313)
T ss_dssp CEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGC--CCTTCCEEECCSS-EEEEE----CCGGGG-----
T ss_pred cccccccccccccCchhhccCcccceeecccccccccccccccc--ccccccccccccc-ccccc----cccccc-----
Confidence 888777765555554 3466677777777775544456655543 2333 44544432 11100 000000
Q ss_pred cCCCchhhcccccccccCCCCCCccccCCCCCCCCCccEEEEeCCCCccccccCCCchhhHHHHHhhcCchhhhhhccCC
Q 003013 541 DCCNLRTLMAEQDICSSSRGCTSLTSFSSENDLPATLEHLEVSSCSNLAFLSRNGNLPRALKYLVSLCSKLESLAERLDN 620 (857)
Q Consensus 541 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 620 (857)
. .....+++..+
T Consensus 196 --------------------------------~-l~~~~l~l~~~----------------------------------- 207 (313)
T d1ogqa_ 196 --------------------------------N-LNLAFVDLSRN----------------------------------- 207 (313)
T ss_dssp --------------------------------G-CCCSEEECCSS-----------------------------------
T ss_pred --------------------------------c-ccccccccccc-----------------------------------
Confidence 0 01222333222
Q ss_pred CCcceeeccCcCCccccCcCCCCCCCCCeEEeecCCCCcccCCCCCCCCCcceEeeccccCcccCcccCCCCCCccEEee
Q 003013 621 TSLEGIFIYELENLKSLPAGLHNLHHLQKISIADCPNLESFPEEGLPSTKLTELSIRECENLKALPNCMHNLTSLLNLEI 700 (857)
Q Consensus 621 ~~L~~l~l~~~~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l 700 (857)
.....+|..+..+++|+.+++.++.....+ ..+..+++|+.|++++|.....+|.++.++++|++|++
T Consensus 208 -----------~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~-~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~L 275 (313)
T d1ogqa_ 208 -----------MLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNV 275 (313)
T ss_dssp -----------EEEECCGGGCCTTSCCSEEECCSSEECCBG-GGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEEC
T ss_pred -----------cccccccccccccccccccccccccccccc-cccccccccccccCccCeecccCChHHhCCCCCCEEEC
Confidence 222344555667788888888877543333 35566778888888887655578888888888888888
Q ss_pred cCCCCCcccCCCCCCCCCCeEEecCCCC
Q 003013 701 RRCPSVVSFPEDGFPTNLKSLKVHDLKI 728 (857)
Q Consensus 701 ~~c~~l~~l~~~~~~~~L~~L~l~~~~~ 728 (857)
++|.-...+|..+.+++|+.+++.+|+.
T Consensus 276 s~N~l~g~iP~~~~L~~L~~l~l~~N~~ 303 (313)
T d1ogqa_ 276 SFNNLCGEIPQGGNLQRFDVSAYANNKC 303 (313)
T ss_dssp CSSEEEEECCCSTTGGGSCGGGTCSSSE
T ss_pred cCCcccccCCCcccCCCCCHHHhCCCcc
Confidence 8874333677655567777777777764
No 7
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.57 E-value=6.6e-15 Score=151.37 Aligned_cols=105 Identities=18% Similarity=0.184 Sum_probs=68.8
Q ss_pred CCCcEEeEcCCCCCC--cCC-CCCCCCCcceeecccccccc-ccchhhhcCCCCCccEEEEecCCCCCCCCC-CCCCCCc
Q 003013 411 CSLTDMKILGCASLV--SFP-EVALPSQLRTVRIQECNALK-SLPEAWMYNSNSSLESLKIRSCNSLVSFPE-IALPSQL 485 (857)
Q Consensus 411 ~~L~~L~l~~~~~l~--~~~-~~~~l~~L~~L~l~~~~~l~-~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~-~~~~~~L 485 (857)
..++.|+|+++.... .+| .++.+++|++|+|+++..+. .+|..+.. +++|++|++++|......+. ...+..|
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~--L~~L~~L~Ls~N~l~~~~~~~~~~~~~L 127 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAK--LTQLHYLYITHTNVSGAIPDFLSQIKTL 127 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGG--CTTCSEEEEEEECCEEECCGGGGGCTTC
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCcccccccccccccccccccccccc--ccccchhhhccccccccccccccchhhh
Confidence 367888888874433 233 57778888888888754454 67887776 88888888887643332232 3556677
Q ss_pred cEEeccccccccccChhhhccCCCCccEEEecCC
Q 003013 486 RTVRIQECNALKSLPEAWMHNSNSSLESLEIRSC 519 (857)
Q Consensus 486 ~~L~l~~~~~l~~lp~~~~~~~l~~L~~L~l~~c 519 (857)
+.++++++.....+|..+.. +++|+.++++++
T Consensus 128 ~~l~l~~N~~~~~~p~~l~~--l~~L~~l~l~~n 159 (313)
T d1ogqa_ 128 VTLDFSYNALSGTLPPSISS--LPNLVGITFDGN 159 (313)
T ss_dssp CEEECCSSEEESCCCGGGGG--CTTCCEEECCSS
T ss_pred cccccccccccccCchhhcc--Ccccceeecccc
Confidence 77777776655566665544 566666666653
No 8
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.55 E-value=4.1e-13 Score=137.19 Aligned_cols=104 Identities=21% Similarity=0.355 Sum_probs=64.0
Q ss_pred ceEEEccCCCCCCcchhhhCCCCCCcEEeEcCCCCCCcCCC--CCCCCCcceeecccccccccc-chhhhcCCCCCccEE
Q 003013 389 LRFLELSYCQGLTKLPQALLTLCSLTDMKILGCASLVSFPE--VALPSQLRTVRIQECNALKSL-PEAWMYNSNSSLESL 465 (857)
Q Consensus 389 L~~L~L~~~~~l~~lp~~~~~l~~L~~L~l~~~~~l~~~~~--~~~l~~L~~L~l~~~~~l~~l-~~~~~~~~l~~L~~L 465 (857)
+++++-++ ..++.+|..+. +++++|++++| .++.+|. +..+++|++|+++++. +..+ |..+.. +++|++|
T Consensus 12 ~~~~~C~~-~~L~~lP~~l~--~~l~~L~Ls~N-~i~~l~~~~f~~l~~L~~L~l~~n~-~~~i~~~~f~~--l~~L~~L 84 (305)
T d1xkua_ 12 LRVVQCSD-LGLEKVPKDLP--PDTALLDLQNN-KITEIKDGDFKNLKNLHTLILINNK-ISKISPGAFAP--LVKLERL 84 (305)
T ss_dssp TTEEECTT-SCCCSCCCSCC--TTCCEEECCSS-CCCCBCTTTTTTCTTCCEEECCSSC-CCCBCTTTTTT--CTTCCEE
T ss_pred CCEEEecC-CCCCccCCCCC--CCCCEEECcCC-cCCCcChhHhhcccccccccccccc-ccccchhhhhC--CCccCEe
Confidence 34444443 24567776553 57888888887 5666653 5667888888888877 4555 334444 7788888
Q ss_pred EEecCCCCCCCCCCCCCCCccEEeccccccccccChh
Q 003013 466 KIRSCNSLVSFPEIALPSQLRTVRIQECNALKSLPEA 502 (857)
Q Consensus 466 ~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~lp~~ 502 (857)
++++| .++.+|. .....+..|.+.++ .+..++..
T Consensus 85 ~l~~n-~l~~l~~-~~~~~l~~L~~~~n-~l~~l~~~ 118 (305)
T d1xkua_ 85 YLSKN-QLKELPE-KMPKTLQELRVHEN-EITKVRKS 118 (305)
T ss_dssp ECCSS-CCSBCCS-SCCTTCCEEECCSS-CCCBBCHH
T ss_pred cccCC-ccCcCcc-chhhhhhhhhcccc-chhhhhhh
Confidence 88775 4555553 23456666666663 34444443
No 9
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.49 E-value=1.1e-11 Score=129.39 Aligned_cols=25 Identities=24% Similarity=0.510 Sum_probs=11.3
Q ss_pred CCCCCCCCCCCCeEecCCCCCCcccC
Q 003013 755 LVSPPPFPASLTELWISFMPDLECLS 780 (857)
Q Consensus 755 l~~~~~~~~~L~~L~l~~~~~l~~l~ 780 (857)
+..+|..+++|++|++++| .++.+|
T Consensus 316 L~~l~~~~~~L~~L~L~~N-~L~~lp 340 (353)
T d1jl5a_ 316 LAEVPELPQNLKQLHVEYN-PLREFP 340 (353)
T ss_dssp CSCCCCCCTTCCEEECCSS-CCSSCC
T ss_pred CCccccccCCCCEEECcCC-cCCCCC
Confidence 3444444444444444443 255544
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=6.1e-13 Score=132.47 Aligned_cols=81 Identities=22% Similarity=0.216 Sum_probs=55.9
Q ss_pred CCCCceEEEccCCCCCCcch-hhhCCCCCCcEEeEcCCCCCCcCCCCCCCCCcceeeccccccccccchhhhcCCCCCcc
Q 003013 385 LPCRLRFLELSYCQGLTKLP-QALLTLCSLTDMKILGCASLVSFPEVALPSQLRTVRIQECNALKSLPEAWMYNSNSSLE 463 (857)
Q Consensus 385 l~~~L~~L~L~~~~~l~~lp-~~~~~l~~L~~L~l~~~~~l~~~~~~~~l~~L~~L~l~~~~~l~~l~~~~~~~~l~~L~ 463 (857)
+|+++++|+|++|. +..+| ..+..+++|++|+|++| .++.++..+.+++|++|+++++. ++..+..+.. +++|+
T Consensus 29 lp~~l~~L~Ls~N~-i~~l~~~~f~~l~~L~~L~L~~N-~l~~l~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~--l~~L~ 103 (266)
T d1p9ag_ 29 LPKDTTILHLSENL-LYTFSLATLMPYTRLTQLNLDRA-ELTKLQVDGTLPVLGTLDLSHNQ-LQSLPLLGQT--LPALT 103 (266)
T ss_dssp CCTTCCEEECTTSC-CSEEEGGGGTTCTTCCEEECTTS-CCCEEECCSCCTTCCEEECCSSC-CSSCCCCTTT--CTTCC
T ss_pred cCcCCCEEECcCCc-CCCcCHHHhhccccccccccccc-ccccccccccccccccccccccc-cccccccccc--ccccc
Confidence 45778888888864 45555 45778888888888887 56666666677777777777765 5555555444 66666
Q ss_pred EEEEecC
Q 003013 464 SLKIRSC 470 (857)
Q Consensus 464 ~L~l~~~ 470 (857)
.|+++++
T Consensus 104 ~L~l~~~ 110 (266)
T d1p9ag_ 104 VLDVSFN 110 (266)
T ss_dssp EEECCSS
T ss_pred ccccccc
Confidence 6666654
No 11
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=4.3e-12 Score=126.18 Aligned_cols=179 Identities=23% Similarity=0.255 Sum_probs=117.3
Q ss_pred CCccccCcCCCCCCCCCeEEeecCCCCcccCC-CCCCCCCcceEeeccccCcccCcccCCCCCCccEEeecCCCCCcccC
Q 003013 632 ENLKSLPAGLHNLHHLQKISIADCPNLESFPE-EGLPSTKLTELSIRECENLKALPNCMHNLTSLLNLEIRRCPSVVSFP 710 (857)
Q Consensus 632 ~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~~-~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~ 710 (857)
.+++.+|..+. ++|++|+++++ .+..++. .+..+++|++|+++++ .++.++. +..+++|++|++++|. ++..+
T Consensus 20 ~~L~~iP~~lp--~~l~~L~Ls~N-~i~~l~~~~f~~l~~L~~L~L~~N-~l~~l~~-~~~l~~L~~L~Ls~N~-l~~~~ 93 (266)
T d1p9ag_ 20 RNLTALPPDLP--KDTTILHLSEN-LLYTFSLATLMPYTRLTQLNLDRA-ELTKLQV-DGTLPVLGTLDLSHNQ-LQSLP 93 (266)
T ss_dssp SCCSSCCSCCC--TTCCEEECTTS-CCSEEEGGGGTTCTTCCEEECTTS-CCCEEEC-CSCCTTCCEEECCSSC-CSSCC
T ss_pred CCCCeeCcCcC--cCCCEEECcCC-cCCCcCHHHhhccccccccccccc-ccccccc-cccccccccccccccc-ccccc
Confidence 44566665542 56777777776 4555554 3456777777777775 3666653 4567777777777773 44444
Q ss_pred CC-CCCCCCCeEEecCCCCcccccccccCCCCCccEeEEcCCCCCCCCCCC----CCCCCCeEecCCCCCCcccCCCC-C
Q 003013 711 ED-GFPTNLKSLKVHDLKISKALLEWGSNRFTSLRKLEIWGPCPDLVSPPP----FPASLTELWISFMPDLECLSSIG-E 784 (857)
Q Consensus 711 ~~-~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~l~~~~~----~~~~L~~L~l~~~~~l~~l~~~~-~ 784 (857)
.. ..+++|+.|+++++.... +....+..+.++++|.+.+ +.+..+++ .+++|+.|++++ ++++.++... .
T Consensus 94 ~~~~~l~~L~~L~l~~~~~~~-~~~~~~~~l~~l~~L~l~~--n~l~~l~~~~~~~l~~l~~l~l~~-N~l~~~~~~~~~ 169 (266)
T d1p9ag_ 94 LLGQTLPALTVLDVSFNRLTS-LPLGALRGLGELQELYLKG--NELKTLPPGLLTPTPKLEKLSLAN-NNLTELPAGLLN 169 (266)
T ss_dssp CCTTTCTTCCEEECCSSCCCC-CCSSTTTTCTTCCEEECTT--SCCCCCCTTTTTTCTTCCEEECTT-SCCSCCCTTTTT
T ss_pred cccccccccccccccccccce-eeccccccccccccccccc--cccceeccccccccccchhccccc-ccccccCccccc
Confidence 33 445677777777766433 3333556677777777776 34555544 456777888877 5777777554 6
Q ss_pred CccccCceeccCCCCCCCCCCCCc-cccccceeecCCc
Q 003013 785 NLTSLKTLRLSYCRKLTYFSKEGL-PKSLLRLYINHCP 821 (857)
Q Consensus 785 ~l~~L~~L~l~~c~~l~~ip~~~l-~~~L~~L~i~~c~ 821 (857)
.+++|++|++++| .++++|.... .++|+.|+++++|
T Consensus 170 ~l~~L~~L~Ls~N-~L~~lp~~~~~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 170 GLENLDTLLLQEN-SLYTIPKGFFGSHLLPFAFLHGNP 206 (266)
T ss_dssp TCTTCCEEECCSS-CCCCCCTTTTTTCCCSEEECCSCC
T ss_pred cccccceeecccC-CCcccChhHCCCCCCCEEEecCCC
Confidence 7888888888888 5778877522 3678888888765
No 12
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36 E-value=1.6e-11 Score=123.49 Aligned_cols=64 Identities=16% Similarity=0.175 Sum_probs=38.4
Q ss_pred CCCCCCCCeEEeecCCCCcccCCCCCCCCCcceEeeccccCcccCcccCCCCCCccEEeecCCC
Q 003013 641 LHNLHHLQKISIADCPNLESFPEEGLPSTKLTELSIRECENLKALPNCMHNLTSLLNLEIRRCP 704 (857)
Q Consensus 641 ~~~l~~L~~L~l~~c~~l~~l~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~ 704 (857)
+..+++|+.++++++......|..+..+++|++|+++++......+..+..+++|++|++++++
T Consensus 173 f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 173 FRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNP 236 (284)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSC
T ss_pred hccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCC
Confidence 4456667777777664443334555566677777777655333333456667777777776653
No 13
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31 E-value=2.9e-11 Score=121.60 Aligned_cols=183 Identities=20% Similarity=0.233 Sum_probs=129.9
Q ss_pred CCccccCc-CCCCCCCCCeEEeecCCCCcccCCC-CCCCCCcceEeeccccCcccCc-ccCCCCCCccEEeecCCCCCcc
Q 003013 632 ENLKSLPA-GLHNLHHLQKISIADCPNLESFPEE-GLPSTKLTELSIRECENLKALP-NCMHNLTSLLNLEIRRCPSVVS 708 (857)
Q Consensus 632 ~~l~~l~~-~~~~l~~L~~L~l~~c~~l~~l~~~-~~~~~~L~~L~l~~c~~l~~l~-~~~~~l~~L~~L~l~~c~~l~~ 708 (857)
++++.+|. .+..+++|++|+++++ .+..++.. ...++.++.+.+.....++.++ ..+.++++|++|++.++. +..
T Consensus 42 N~i~~i~~~~f~~l~~L~~L~ls~n-~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l~~n~-~~~ 119 (284)
T d1ozna_ 42 NRISHVPAASFRACRNLTILWLHSN-VLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG-LQE 119 (284)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSS-CCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSC-CCC
T ss_pred CcCCCCCHHHhhccccccccccccc-cccccccccccccccccccccccccccccccchhhcccccCCEEecCCcc-ccc
Confidence 34555553 4677888999999877 45555443 4456788888887777777764 467888999999998884 344
Q ss_pred cCCC--CCCCCCCeEEecCCCCcccccccccCCCCCccEeEEcCCCCCCCCCCC----CCCCCCeEecCCCCCCcccC-C
Q 003013 709 FPED--GFPTNLKSLKVHDLKISKALLEWGSNRFTSLRKLEIWGPCPDLVSPPP----FPASLTELWISFMPDLECLS-S 781 (857)
Q Consensus 709 l~~~--~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~l~~~~~----~~~~L~~L~l~~~~~l~~l~-~ 781 (857)
++.. ..+.+|+.+++.+|.. +.+++..+..+++|++|++++ +++..+++ .+++|+.+.+.+ +++..++ .
T Consensus 120 ~~~~~~~~~~~L~~l~l~~N~l-~~i~~~~f~~~~~L~~L~l~~--N~l~~l~~~~f~~l~~L~~l~l~~-N~l~~i~~~ 195 (284)
T d1ozna_ 120 LGPGLFRGLAALQYLYLQDNAL-QALPDDTFRDLGNLTHLFLHG--NRISSVPERAFRGLHSLDRLLLHQ-NRVAHVHPH 195 (284)
T ss_dssp CCTTTTTTCTTCCEEECCSSCC-CCCCTTTTTTCTTCCEEECCS--SCCCEECTTTTTTCTTCCEEECCS-SCCCEECTT
T ss_pred ccccccchhcccchhhhccccc-cccChhHhccccchhhccccc--Ccccccchhhhccccccchhhhhh-ccccccChh
Confidence 4433 4567889999988865 455555677888899999987 35555544 568899999988 4566654 4
Q ss_pred CCCCccccCceeccCCCCCCCCCCCC--ccccccceeecCCc
Q 003013 782 IGENLTSLKTLRLSYCRKLTYFSKEG--LPKSLLRLYINHCP 821 (857)
Q Consensus 782 ~~~~l~~L~~L~l~~c~~l~~ip~~~--l~~~L~~L~i~~c~ 821 (857)
....+++|++|++++| .+..++... -.++|+.|+++++|
T Consensus 196 ~f~~l~~L~~L~l~~N-~i~~~~~~~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 196 AFRDLGRLMTLYLFAN-NLSALPTEALAPLRALQYLRLNDNP 236 (284)
T ss_dssp TTTTCTTCCEEECCSS-CCSCCCHHHHTTCTTCCEEECCSSC
T ss_pred Hhhhhhhccccccccc-ccccccccccccccccCEEEecCCC
Confidence 4488899999999998 566666532 23689999998754
No 14
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.27 E-value=2.8e-11 Score=117.10 Aligned_cols=57 Identities=16% Similarity=0.301 Sum_probs=33.8
Q ss_pred CCCCCCCCeEEeecCCCCcccCCCCCCCCCcceEeeccccCcccCcccCCCCCCccEEeec
Q 003013 641 LHNLHHLQKISIADCPNLESFPEEGLPSTKLTELSIRECENLKALPNCMHNLTSLLNLEIR 701 (857)
Q Consensus 641 ~~~l~~L~~L~l~~c~~l~~l~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~ 701 (857)
+.++++|++|++++| .++.++. +..+++|++|++++| .++.++. +.++++|++|+++
T Consensus 169 l~~l~~L~~L~Ls~n-~l~~l~~-l~~l~~L~~L~Ls~N-~lt~i~~-l~~l~~L~~L~ls 225 (227)
T d1h6ua2 169 LANLSKLTTLKADDN-KISDISP-LASLPNLIEVHLKNN-QISDVSP-LANTSNLFIVTLT 225 (227)
T ss_dssp GTTCTTCCEEECCSS-CCCCCGG-GGGCTTCCEEECTTS-CCCBCGG-GTTCTTCCEEEEE
T ss_pred hcccccceecccCCC-ccCCChh-hcCCCCCCEEECcCC-cCCCCcc-cccCCCCCEEEee
Confidence 345666777777666 4555542 344566666666665 3555553 5666666666664
No 15
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=1.1e-12 Score=131.65 Aligned_cols=91 Identities=16% Similarity=0.244 Sum_probs=55.2
Q ss_pred CCCCCCcceeeccccccccc--cchhhhcCCCCCccEEEEecCCCCCC-CCCCCCCCCccEEeccccccccccChhhhcc
Q 003013 430 VALPSQLRTVRIQECNALKS--LPEAWMYNSNSSLESLKIRSCNSLVS-FPEIALPSQLRTVRIQECNALKSLPEAWMHN 506 (857)
Q Consensus 430 ~~~l~~L~~L~l~~~~~l~~--l~~~~~~~~l~~L~~L~l~~~~~~~~-~~~~~~~~~L~~L~l~~~~~l~~lp~~~~~~ 506 (857)
.....+|++|++++|. +.. +...+ ..+++|++|++++|..-.. +..+..+++|++|++++|..+....-.....
T Consensus 42 ~~~~~~L~~LdLs~~~-i~~~~l~~l~--~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~ 118 (284)
T d2astb2 42 HFSPFRVQHMDLSNSV-IEVSTLHGIL--SQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLS 118 (284)
T ss_dssp CCCCBCCCEEECTTCE-ECHHHHHHHH--TTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHH
T ss_pred hccCCCCCEEECCCCc-cCHHHHHHHH--HhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhH
Confidence 3345678888888765 322 22222 3378888888887742211 2234567788888888887665432222223
Q ss_pred CCCCccEEEecCCCCCc
Q 003013 507 SNSSLESLEIRSCDSLT 523 (857)
Q Consensus 507 ~l~~L~~L~l~~c~~l~ 523 (857)
.+++|++|++++|..++
T Consensus 119 ~~~~L~~L~ls~c~~~~ 135 (284)
T d2astb2 119 SCSRLDELNLSWCFDFT 135 (284)
T ss_dssp HCTTCCEEECCCCTTCC
T ss_pred HHHhccccccccccccc
Confidence 36788888888877665
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.24 E-value=3.5e-11 Score=116.34 Aligned_cols=183 Identities=17% Similarity=0.177 Sum_probs=131.5
Q ss_pred CCcceeeccCcCCccccCcCCCCCCCCCeEEeecCCCCcccCCCCCCCCCcceEeeccccCcccCcccCCCCCCccEEee
Q 003013 621 TSLEGIFIYELENLKSLPAGLHNLHHLQKISIADCPNLESFPEEGLPSTKLTELSIRECENLKALPNCMHNLTSLLNLEI 700 (857)
Q Consensus 621 ~~L~~l~l~~~~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l 700 (857)
.+|+.|.+.++ +++.++ ++..+++|++|++++|. +..++. +..+++|++++++++. ++.++ .+..+++|+.+.+
T Consensus 41 ~~L~~L~l~~~-~i~~l~-~l~~l~~L~~L~ls~n~-i~~~~~-l~~l~~l~~l~~~~n~-~~~i~-~l~~l~~L~~l~l 114 (227)
T d1h6ua2 41 DGITTLSAFGT-GVTTIE-GVQYLNNLIGLELKDNQ-ITDLAP-LKNLTKITELELSGNP-LKNVS-AIAGLQSIKTLDL 114 (227)
T ss_dssp HTCCEEECTTS-CCCCCT-TGGGCTTCCEEECCSSC-CCCCGG-GTTCCSCCEEECCSCC-CSCCG-GGTTCTTCCEEEC
T ss_pred CCcCEEECCCC-CCCcch-hHhcCCCCcEeecCCce-eecccc-cccccccccccccccc-ccccc-ccccccccccccc
Confidence 46777788774 577774 57889999999999884 444432 5667899999998865 55565 4778899999999
Q ss_pred cCCCCCcccCCCCCCCCCCeEEecCCCCcccccccccCCCCCccEeEEcCCCCCCCCCC--CCCCCCCeEecCCCCCCcc
Q 003013 701 RRCPSVVSFPEDGFPTNLKSLKVHDLKISKALLEWGSNRFTSLRKLEIWGPCPDLVSPP--PFPASLTELWISFMPDLEC 778 (857)
Q Consensus 701 ~~c~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~l~~~~--~~~~~L~~L~l~~~~~l~~ 778 (857)
++|.. ..++.....+.+..+.++++...... .+..+++|++|.+++ + .+...+ ..+++|++|+++++ ++++
T Consensus 115 ~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~L~~L~l~~-n-~~~~~~~l~~l~~L~~L~Ls~n-~l~~ 187 (227)
T d1h6ua2 115 TSTQI-TDVTPLAGLSNLQVLYLDLNQITNIS---PLAGLTNLQYLSIGN-A-QVSDLTPLANLSKLTTLKADDN-KISD 187 (227)
T ss_dssp TTSCC-CCCGGGTTCTTCCEEECCSSCCCCCG---GGGGCTTCCEEECCS-S-CCCCCGGGTTCTTCCEEECCSS-CCCC
T ss_pred ccccc-cccchhccccchhhhhchhhhhchhh---hhccccccccccccc-c-ccccchhhcccccceecccCCC-ccCC
Confidence 88853 33333345678888888887654432 356778899999987 3 333333 25688999999885 7888
Q ss_pred cCCCCCCccccCceeccCCCCCCCCCCCCccccccceeec
Q 003013 779 LSSIGENLTSLKTLRLSYCRKLTYFSKEGLPKSLLRLYIN 818 (857)
Q Consensus 779 l~~~~~~l~~L~~L~l~~c~~l~~ip~~~l~~~L~~L~i~ 818 (857)
++ ...++++|++|++++| +++.++.-.-.++|+.|+++
T Consensus 188 l~-~l~~l~~L~~L~Ls~N-~lt~i~~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 188 IS-PLASLPNLIEVHLKNN-QISDVSPLANTSNLFIVTLT 225 (227)
T ss_dssp CG-GGGGCTTCCEEECTTS-CCCBCGGGTTCTTCCEEEEE
T ss_pred Ch-hhcCCCCCCEEECcCC-cCCCCcccccCCCCCEEEee
Confidence 76 4578899999999998 68877652223578888775
No 17
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.21 E-value=3.8e-11 Score=113.17 Aligned_cols=149 Identities=21% Similarity=0.225 Sum_probs=94.4
Q ss_pred CCCCCeEEeecCCCCcccCCCCCCCCCcceEeeccccCcccCcccCCCCCCccEEeecCCCCCcccCCCCCCCCCCeEEe
Q 003013 644 LHHLQKISIADCPNLESFPEEGLPSTKLTELSIRECENLKALPNCMHNLTSLLNLEIRRCPSVVSFPEDGFPTNLKSLKV 723 (857)
Q Consensus 644 l~~L~~L~l~~c~~l~~l~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~~~L~~L~l 723 (857)
+++|++|++++| .+.++. ++..+++|++|++++| .++.++. +.++++|++|++.+|. +..++....+++|+.|++
T Consensus 39 l~~l~~L~l~~~-~i~~l~-~l~~l~nL~~L~Ls~N-~l~~~~~-l~~l~~L~~L~l~~n~-~~~~~~l~~l~~L~~L~l 113 (199)
T d2omxa2 39 LDQVTTLQADRL-GIKSID-GVEYLNNLTQINFSNN-QLTDITP-LKNLTKLVDILMNNNQ-IADITPLANLTNLTGLTL 113 (199)
T ss_dssp HTTCCEEECTTS-CCCCCT-TGGGCTTCCEEECCSS-CCCCCGG-GTTCTTCCEEECCSSC-CCCCGGGTTCTTCSEEEC
T ss_pred hcCCCEEECCCC-CCCCcc-ccccCCCcCcCccccc-cccCccc-ccCCcccccccccccc-cccccccccccccccccc
Confidence 466677777766 344443 3445667777777775 3555553 6677777777777763 444444445567777777
Q ss_pred cCCCCcccccccccCCCCCccEeEEcCCCCCCCCCCC--CCCCCCeEecCCCCCCcccCCCCCCccccCceeccCCCCCC
Q 003013 724 HDLKISKALLEWGSNRFTSLRKLEIWGPCPDLVSPPP--FPASLTELWISFMPDLECLSSIGENLTSLKTLRLSYCRKLT 801 (857)
Q Consensus 724 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~l~~~~~--~~~~L~~L~l~~~~~l~~l~~~~~~l~~L~~L~l~~c~~l~ 801 (857)
++|...... .+..+++|+.|++++ +.+..++. .+++|+.|++.+ ++++.++ ...++++|++|++++| +++
T Consensus 114 ~~~~~~~~~---~~~~l~~L~~L~l~~--n~l~~~~~l~~~~~L~~L~l~~-n~l~~l~-~l~~l~~L~~L~ls~N-~i~ 185 (199)
T d2omxa2 114 FNNQITDID---PLKNLTNLNRLELSS--NTISDISALSGLTSLQQLNFSS-NQVTDLK-PLANLTTLERLDISSN-KVS 185 (199)
T ss_dssp CSSCCCCCG---GGTTCTTCSEEECCS--SCCCCCGGGTTCTTCSEEECCS-SCCCCCG-GGTTCTTCCEEECCSS-CCC
T ss_pred ccccccccc---ccchhhhhHHhhhhh--hhhccccccccccccccccccc-ccccCCc-cccCCCCCCEEECCCC-CCC
Confidence 766554321 355677777777776 23444432 456777777777 4677765 3567888888888888 577
Q ss_pred CCCC
Q 003013 802 YFSK 805 (857)
Q Consensus 802 ~ip~ 805 (857)
.++.
T Consensus 186 ~i~~ 189 (199)
T d2omxa2 186 DISV 189 (199)
T ss_dssp CCGG
T ss_pred CCcc
Confidence 6653
No 18
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21 E-value=9.9e-11 Score=114.55 Aligned_cols=193 Identities=18% Similarity=0.150 Sum_probs=133.2
Q ss_pred CCcceeeccCcCCccccCc-CCCCCCCCCeEEeecCCCCcccCCC-CCCCCCcceEeeccccCcccCc-ccCCCCCCccE
Q 003013 621 TSLEGIFIYELENLKSLPA-GLHNLHHLQKISIADCPNLESFPEE-GLPSTKLTELSIRECENLKALP-NCMHNLTSLLN 697 (857)
Q Consensus 621 ~~L~~l~l~~~~~l~~l~~-~~~~l~~L~~L~l~~c~~l~~l~~~-~~~~~~L~~L~l~~c~~l~~l~-~~~~~l~~L~~ 697 (857)
.+++.|++++ +.++.+|. .+.++++|++|+++++.....++.. +..+++++++.+..+..+..++ ..+..+++|++
T Consensus 29 ~~l~~L~Ls~-n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~ 107 (242)
T d1xwdc1 29 RNAIELRFVL-TKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQY 107 (242)
T ss_dssp SCCSEEEEES-CCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCE
T ss_pred CCCCEEECcC-CcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccc
Confidence 4678888887 56788876 4688999999999998766666553 3457889999888777666555 35678999999
Q ss_pred EeecCCCCCcccCCCCCCCCCCeEEec--CCCCcccccccccCCCC-CccEeEEcCCCCCCCCCCC---CCCCCCeEecC
Q 003013 698 LEIRRCPSVVSFPEDGFPTNLKSLKVH--DLKISKALLEWGSNRFT-SLRKLEIWGPCPDLVSPPP---FPASLTELWIS 771 (857)
Q Consensus 698 L~l~~c~~l~~l~~~~~~~~L~~L~l~--~~~~~~~~~~~~~~~l~-~L~~L~l~~~~~~l~~~~~---~~~~L~~L~l~ 771 (857)
|.+.++ .+...+....+.+++.+... ++..+..+....+..++ .++.|++.+ +.+..++. ..++++++...
T Consensus 108 l~l~~~-~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~--n~l~~i~~~~~~~~~l~~~~~l 184 (242)
T d1xwdc1 108 LLISNT-GIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNK--NGIQEIHNCAFNGTQLDELNLS 184 (242)
T ss_dssp EEEESC-CCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCS--SCCCEECTTTTTTCCEEEEECT
T ss_pred cccchh-hhcccccccccccccccccccccccccccccccccccccccceeeeccc--ccccccccccccchhhhccccc
Confidence 999987 56666655555666666532 33344555444555554 677788875 45555554 34566666666
Q ss_pred CCCCCcccCCCC-CCccccCceeccCCCCCCCCCCCCccccccceeecC
Q 003013 772 FMPDLECLSSIG-ENLTSLKTLRLSYCRKLTYFSKEGLPKSLLRLYINH 819 (857)
Q Consensus 772 ~~~~l~~l~~~~-~~l~~L~~L~l~~c~~l~~ip~~~l~~~L~~L~i~~ 819 (857)
.+++++.+|... .++++|+.|++++| +++.+|...+ .++..|..-+
T Consensus 185 ~~n~l~~l~~~~f~~l~~L~~L~Ls~N-~l~~l~~~~~-~~l~~L~~l~ 231 (242)
T d1xwdc1 185 DNNNLEELPNDVFHGASGPVILDISRT-RIHSLPSYGL-ENLKKLRARS 231 (242)
T ss_dssp TCTTCCCCCTTTTTTSCCCSEEECTTS-CCCCCCSSSC-TTCCEEESSS
T ss_pred cccccccccHHHhcCCCCCCEEECCCC-cCCccCHHHH-cCCcccccCc
Confidence 668899998765 88999999999988 5888887544 3444444333
No 19
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.19 E-value=2e-10 Score=112.25 Aligned_cols=84 Identities=19% Similarity=0.217 Sum_probs=55.4
Q ss_pred CCCCceEEEccCCCCCCcchh-hhCCCCCCcEEeEcCCCCCCcCCC--CCCCCCcceeeccccccccccchhhhcCCCCC
Q 003013 385 LPCRLRFLELSYCQGLTKLPQ-ALLTLCSLTDMKILGCASLVSFPE--VALPSQLRTVRIQECNALKSLPEAWMYNSNSS 461 (857)
Q Consensus 385 l~~~L~~L~L~~~~~l~~lp~-~~~~l~~L~~L~l~~~~~l~~~~~--~~~l~~L~~L~l~~~~~l~~l~~~~~~~~l~~ 461 (857)
+|.++++|+++++. +..+|. .+.++++|++|++++|.....++. +..+++++++.+..+.++..++.... .++++
T Consensus 27 l~~~l~~L~Ls~n~-i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~-~~l~~ 104 (242)
T d1xwdc1 27 LPRNAIELRFVLTK-LRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAF-QNLPN 104 (242)
T ss_dssp SCSCCSEEEEESCC-CCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSE-ECCTT
T ss_pred CCCCCCEEECcCCc-CCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccc-ccccc
Confidence 45678888888764 566665 467788888888888765554443 34567777777766655655554422 23677
Q ss_pred ccEEEEecC
Q 003013 462 LESLKIRSC 470 (857)
Q Consensus 462 L~~L~l~~~ 470 (857)
|++|+++++
T Consensus 105 L~~l~l~~~ 113 (242)
T d1xwdc1 105 LQYLLISNT 113 (242)
T ss_dssp CCEEEEESC
T ss_pred ccccccchh
Confidence 777777664
No 20
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.18 E-value=3.8e-11 Score=114.16 Aligned_cols=163 Identities=19% Similarity=0.126 Sum_probs=89.6
Q ss_pred CCCCCeEEeecCCCCcccCCCCCCCCCcceEeeccccCcccCcccCCCCCCccEEeecCCCCCcccCCCCCCCCCCeEEe
Q 003013 644 LHHLQKISIADCPNLESFPEEGLPSTKLTELSIRECENLKALPNCMHNLTSLLNLEIRRCPSVVSFPEDGFPTNLKSLKV 723 (857)
Q Consensus 644 l~~L~~L~l~~c~~l~~l~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~~~L~~L~l 723 (857)
+.+|+.|++++| .++.++ ++..+++|++|++++|. ++.++. +..+++|++|++++| .++.++....+++|+.|++
T Consensus 45 L~~L~~L~l~~~-~i~~l~-~l~~l~~L~~L~L~~n~-i~~l~~-~~~l~~L~~L~l~~n-~i~~l~~l~~l~~L~~L~l 119 (210)
T d1h6ta2 45 LNSIDQIIANNS-DIKSVQ-GIQYLPNVTKLFLNGNK-LTDIKP-LANLKNLGWLFLDEN-KVKDLSSLKDLKKLKSLSL 119 (210)
T ss_dssp HHTCCEEECTTS-CCCCCT-TGGGCTTCCEEECCSSC-CCCCGG-GTTCTTCCEEECCSS-CCCCGGGGTTCTTCCEEEC
T ss_pred hcCccEEECcCC-CCCCch-hHhhCCCCCEEeCCCcc-ccCccc-cccCccccccccccc-ccccccccccccccccccc
Confidence 345555555554 333333 23345566666666543 444442 455666666666655 3444443344456666666
Q ss_pred cCCCCcccccccccCCCCCccEeEEcCCCCCCCCCCC--CCCCCCeEecCCCCCCcccCCCCCCccccCceeccCCCCCC
Q 003013 724 HDLKISKALLEWGSNRFTSLRKLEIWGPCPDLVSPPP--FPASLTELWISFMPDLECLSSIGENLTSLKTLRLSYCRKLT 801 (857)
Q Consensus 724 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~l~~~~~--~~~~L~~L~l~~~~~l~~l~~~~~~l~~L~~L~l~~c~~l~ 801 (857)
.+|.... + ..+.++++|+.+++++ ..+..++. .+++|+.+++++ +.++.++ ....+++|++|++++| .++
T Consensus 120 ~~~~~~~-~--~~l~~l~~l~~l~~~~--n~l~~~~~~~~l~~L~~l~l~~-n~l~~i~-~l~~l~~L~~L~Ls~N-~i~ 191 (210)
T d1h6ta2 120 EHNGISD-I--NGLVHLPQLESLYLGN--NKITDITVLSRLTKLDTLSLED-NQISDIV-PLAGLTKLQNLYLSKN-HIS 191 (210)
T ss_dssp TTSCCCC-C--GGGGGCTTCCEEECCS--SCCCCCGGGGGCTTCSEEECCS-SCCCCCG-GGTTCTTCCEEECCSS-CCC
T ss_pred ccccccc-c--cccccccccccccccc--cccccccccccccccccccccc-ccccccc-cccCCCCCCEEECCCC-CCC
Confidence 6554422 1 1344556666666654 22332222 456666666666 3566665 3567788888888887 677
Q ss_pred CCCCCCccccccceeecC
Q 003013 802 YFSKEGLPKSLLRLYINH 819 (857)
Q Consensus 802 ~ip~~~l~~~L~~L~i~~ 819 (857)
.+|.-.-.++|+.|++++
T Consensus 192 ~l~~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 192 DLRALAGLKNLDVLELFS 209 (210)
T ss_dssp BCGGGTTCTTCSEEEEEE
T ss_pred CChhhcCCCCCCEEEccC
Confidence 776422225788887754
No 21
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.17 E-value=1.7e-10 Score=108.51 Aligned_cols=161 Identities=17% Similarity=0.229 Sum_probs=99.6
Q ss_pred cCCCCCeEeccCCCCcccccccccccCCCCCCCCCceEEEccCCCCCCcchhhhCCCCCCcEEeEcCCCCCCcCCCCCCC
Q 003013 354 DIISLNRLQIKGCPRLLSLVTEEEHDHQQPELPCRLRFLELSYCQGLTKLPQALLTLCSLTDMKILGCASLVSFPEVALP 433 (857)
Q Consensus 354 ~~~~L~~L~l~~~~~l~~l~~~~~~~~~i~~l~~~L~~L~L~~~~~l~~lp~~~~~l~~L~~L~l~~~~~l~~~~~~~~l 433 (857)
.+.+++.|+++++. +..+ ..+..+ ++|++|++++|. +..++. +..+++|++|++++| ....++.+..+
T Consensus 38 ~l~~l~~L~l~~~~-i~~l-------~~l~~l-~nL~~L~Ls~N~-l~~~~~-l~~l~~L~~L~l~~n-~~~~~~~l~~l 105 (199)
T d2omxa2 38 DLDQVTTLQADRLG-IKSI-------DGVEYL-NNLTQINFSNNQ-LTDITP-LKNLTKLVDILMNNN-QIADITPLANL 105 (199)
T ss_dssp HHTTCCEEECTTSC-CCCC-------TTGGGC-TTCCEEECCSSC-CCCCGG-GTTCTTCCEEECCSS-CCCCCGGGTTC
T ss_pred HhcCCCEEECCCCC-CCCc-------cccccC-CCcCcCcccccc-ccCccc-ccCCccccccccccc-ccccccccccc
Confidence 34566777776643 3332 124445 777778877763 455554 777778888888776 45556666777
Q ss_pred CCcceeeccccccccccchhhhcCCCCCccEEEEecCCCCCCCCCCCCCCCccEEeccccccccccChhhhccCCCCccE
Q 003013 434 SQLRTVRIQECNALKSLPEAWMYNSNSSLESLKIRSCNSLVSFPEIALPSQLRTVRIQECNALKSLPEAWMHNSNSSLES 513 (857)
Q Consensus 434 ~~L~~L~l~~~~~l~~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~lp~~~~~~~l~~L~~ 513 (857)
++|+.|+++++. ...++. +. .+++|+.|++++|. +..++.+..+++|+.|++.++ .+..++. + ..+++|+.
T Consensus 106 ~~L~~L~l~~~~-~~~~~~-~~--~l~~L~~L~l~~n~-l~~~~~l~~~~~L~~L~l~~n-~l~~l~~-l--~~l~~L~~ 176 (199)
T d2omxa2 106 TNLTGLTLFNNQ-ITDIDP-LK--NLTNLNRLELSSNT-ISDISALSGLTSLQQLNFSSN-QVTDLKP-L--ANLTTLER 176 (199)
T ss_dssp TTCSEEECCSSC-CCCCGG-GT--TCTTCSEEECCSSC-CCCCGGGTTCTTCSEEECCSS-CCCCCGG-G--TTCTTCCE
T ss_pred cccccccccccc-cccccc-cc--hhhhhHHhhhhhhh-hcccccccccccccccccccc-cccCCcc-c--cCCCCCCE
Confidence 778888877765 333332 22 27778888887653 455666677777888887774 3455543 2 23677888
Q ss_pred EEecCCCCCcccccccCCCcccE
Q 003013 514 LEIRSCDSLTYIARIQLPPSLKR 536 (857)
Q Consensus 514 L~l~~c~~l~~l~~~~~~~~L~~ 536 (857)
|+++++ .++.++.+...++|+.
T Consensus 177 L~ls~N-~i~~i~~l~~L~~L~~ 198 (199)
T d2omxa2 177 LDISSN-KVSDISVLAKLTNLES 198 (199)
T ss_dssp EECCSS-CCCCCGGGGGCTTCSE
T ss_pred EECCCC-CCCCCccccCCCCCCc
Confidence 888775 4565554444444443
No 22
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.17 E-value=1.3e-10 Score=110.38 Aligned_cols=164 Identities=13% Similarity=0.149 Sum_probs=92.6
Q ss_pred CCCCCeEeccCCCCcccccccccccCCCCCCCCCceEEEccCCCCCCcchhhhCCCCCCcEEeEcCCCCCCcCCCCCCCC
Q 003013 355 IISLNRLQIKGCPRLLSLVTEEEHDHQQPELPCRLRFLELSYCQGLTKLPQALLTLCSLTDMKILGCASLVSFPEVALPS 434 (857)
Q Consensus 355 ~~~L~~L~l~~~~~l~~l~~~~~~~~~i~~l~~~L~~L~L~~~~~l~~lp~~~~~l~~L~~L~l~~~~~l~~~~~~~~l~ 434 (857)
+.+|+.|+++++. +..+. .+..+ ++|++|++++|. +..++. ++.+++|++|++++| .++.++.+..++
T Consensus 45 L~~L~~L~l~~~~-i~~l~-------~l~~l-~~L~~L~L~~n~-i~~l~~-~~~l~~L~~L~l~~n-~i~~l~~l~~l~ 112 (210)
T d1h6ta2 45 LNSIDQIIANNSD-IKSVQ-------GIQYL-PNVTKLFLNGNK-LTDIKP-LANLKNLGWLFLDEN-KVKDLSSLKDLK 112 (210)
T ss_dssp HHTCCEEECTTSC-CCCCT-------TGGGC-TTCCEEECCSSC-CCCCGG-GTTCTTCCEEECCSS-CCCCGGGGTTCT
T ss_pred hcCccEEECcCCC-CCCch-------hHhhC-CCCCEEeCCCcc-ccCccc-cccCccccccccccc-cccccccccccc
Confidence 3456666666542 33221 13334 666777776653 344553 566667777777665 455666666666
Q ss_pred CcceeeccccccccccchhhhcCCCCCccEEEEecCCCCCCCCCCCCCCCccEEeccccccccccChhhhccCCCCccEE
Q 003013 435 QLRTVRIQECNALKSLPEAWMYNSNSSLESLKIRSCNSLVSFPEIALPSQLRTVRIQECNALKSLPEAWMHNSNSSLESL 514 (857)
Q Consensus 435 ~L~~L~l~~~~~l~~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~lp~~~~~~~l~~L~~L 514 (857)
+|+.|+++++. +..++. +.. +++++.++++++ .+...+....+++|+.++++++ .+..++. + ..+++|+.|
T Consensus 113 ~L~~L~l~~~~-~~~~~~-l~~--l~~l~~l~~~~n-~l~~~~~~~~l~~L~~l~l~~n-~l~~i~~-l--~~l~~L~~L 183 (210)
T d1h6ta2 113 KLKSLSLEHNG-ISDING-LVH--LPQLESLYLGNN-KITDITVLSRLTKLDTLSLEDN-QISDIVP-L--AGLTKLQNL 183 (210)
T ss_dssp TCCEEECTTSC-CCCCGG-GGG--CTTCCEEECCSS-CCCCCGGGGGCTTCSEEECCSS-CCCCCGG-G--TTCTTCCEE
T ss_pred ccccccccccc-cccccc-ccc--cccccccccccc-cccccccccccccccccccccc-ccccccc-c--cCCCCCCEE
Confidence 77777776665 444443 222 666777776554 3444444556666777777664 3444443 2 225677777
Q ss_pred EecCCCCCcccccccCCCcccEEeec
Q 003013 515 EIRSCDSLTYIARIQLPPSLKRLIVS 540 (857)
Q Consensus 515 ~l~~c~~l~~l~~~~~~~~L~~L~l~ 540 (857)
+++++ .++.++.+...++|+.|+++
T Consensus 184 ~Ls~N-~i~~l~~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 184 YLSKN-HISDLRALAGLKNLDVLELF 208 (210)
T ss_dssp ECCSS-CCCBCGGGTTCTTCSEEEEE
T ss_pred ECCCC-CCCCChhhcCCCCCCEEEcc
Confidence 77664 45555555555666666554
No 23
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14 E-value=1.5e-12 Score=130.62 Aligned_cols=176 Identities=15% Similarity=0.107 Sum_probs=111.5
Q ss_pred CCcceeeccCcCCc-cccCcCCCCCCCCCeEEeecCCCCcccCCCCCCCCCcceEeeccccCccc--CcccCCCCCCccE
Q 003013 621 TSLEGIFIYELENL-KSLPAGLHNLHHLQKISIADCPNLESFPEEGLPSTKLTELSIRECENLKA--LPNCMHNLTSLLN 697 (857)
Q Consensus 621 ~~L~~l~l~~~~~l-~~l~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~~~~L~~L~l~~c~~l~~--l~~~~~~l~~L~~ 697 (857)
.+|+.+++++|.-- ..+...+.++++|++|++++|..-...+..+..+++|++|++++|..++. +..-..++++|++
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~ 125 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 125 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccc
Confidence 46777777765322 22344456788888888888853323333344567888888888877653 2222346788888
Q ss_pred EeecCCCCCcccC--C--CCCCCCCCeEEecCCCC-cc-cccccccCCCCCccEeEEcCCCCCCCCC--CC--CCCCCCe
Q 003013 698 LEIRRCPSVVSFP--E--DGFPTNLKSLKVHDLKI-SK-ALLEWGSNRFTSLRKLEIWGPCPDLVSP--PP--FPASLTE 767 (857)
Q Consensus 698 L~l~~c~~l~~l~--~--~~~~~~L~~L~l~~~~~-~~-~~~~~~~~~l~~L~~L~l~~~~~~l~~~--~~--~~~~L~~ 767 (857)
|++++|..+.... . ...+++|+.|++++|.. +. ........++++|++|++++ |..+..- .. .+++|++
T Consensus 126 L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~-~~~itd~~~~~l~~~~~L~~ 204 (284)
T d2astb2 126 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSD-SVMLKNDCFQEFFQLNYLQH 204 (284)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTT-CTTCCGGGGGGGGGCTTCCE
T ss_pred cccccccccccccchhhhcccccccchhhhccccccccccccccccccccccccccccc-ccCCCchhhhhhcccCcCCE
Confidence 8888887664311 1 12357888888887642 22 11122235678888888887 6655421 11 4578888
Q ss_pred EecCCCCCCcccCC-CCCCccccCceeccCC
Q 003013 768 LWISFMPDLECLSS-IGENLTSLKTLRLSYC 797 (857)
Q Consensus 768 L~l~~~~~l~~l~~-~~~~l~~L~~L~l~~c 797 (857)
|++++|+.++.-.. ...++++|+.|++++|
T Consensus 205 L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 205 LSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp EECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred EECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 88888887765332 2367888888888887
No 24
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.84 E-value=1.8e-09 Score=96.98 Aligned_cols=123 Identities=15% Similarity=0.150 Sum_probs=89.4
Q ss_pred CCceEEEccCCCCCCcchhhhCCCCCCcEEeEcCCCCCCcCCCCCCCCCcceeeccccccccccchhh-hcCCCCCccEE
Q 003013 387 CRLRFLELSYCQGLTKLPQALLTLCSLTDMKILGCASLVSFPEVALPSQLRTVRIQECNALKSLPEAW-MYNSNSSLESL 465 (857)
Q Consensus 387 ~~L~~L~L~~~~~l~~lp~~~~~l~~L~~L~l~~~~~l~~~~~~~~l~~L~~L~l~~~~~l~~l~~~~-~~~~l~~L~~L 465 (857)
.++++|+|++|. +..++..+..+++|++|++++| .+..++.+..+++|++|++++|. ++.++... .. +++|++|
T Consensus 18 ~~lr~L~L~~n~-I~~i~~~~~~l~~L~~L~Ls~N-~i~~l~~~~~l~~L~~L~ls~N~-i~~l~~~~~~~--l~~L~~L 92 (162)
T d1a9na_ 18 VRDRELDLRGYK-IPVIENLGATLDQFDAIDFSDN-EIRKLDGFPLLRRLKTLLVNNNR-ICRIGEGLDQA--LPDLTEL 92 (162)
T ss_dssp TSCEEEECTTSC-CCSCCCGGGGTTCCSEEECCSS-CCCEECCCCCCSSCCEEECCSSC-CCEECSCHHHH--CTTCCEE
T ss_pred CcCcEEECCCCC-CCccCccccccccCCEEECCCC-CCCccCCcccCcchhhhhccccc-ccCCCcccccc--ccccccc
Confidence 678888888864 5777766677889999999997 67777778888999999999987 78877654 34 8899999
Q ss_pred EEecCCCCCCCC---CCCCCCCccEEeccccccccccChh--hhccCCCCccEEEe
Q 003013 466 KIRSCNSLVSFP---EIALPSQLRTVRIQECNALKSLPEA--WMHNSNSSLESLEI 516 (857)
Q Consensus 466 ~l~~~~~~~~~~---~~~~~~~L~~L~l~~~~~l~~lp~~--~~~~~l~~L~~L~l 516 (857)
++++|. +..++ .+..+++|++|++++|+ +...|.. .....+|+|+.|+-
T Consensus 93 ~L~~N~-i~~~~~l~~l~~l~~L~~L~l~~N~-i~~~~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 93 ILTNNS-LVELGDLDPLASLKSLTYLCILRNP-VTNKKHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp ECCSCC-CCCGGGGGGGGGCTTCCEEECCSSG-GGGSTTHHHHHHHHCTTCSEETT
T ss_pred eecccc-ccccccccccccccccchhhcCCCc-cccccchHHHHHHHCCCcCeeCC
Confidence 998864 44444 34667888889888864 4455531 11122677777753
No 25
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.74 E-value=1e-08 Score=87.11 Aligned_cols=60 Identities=18% Similarity=0.223 Sum_probs=27.6
Q ss_pred CCCCCCCCeEEeecCCCCcccCCCCCCCCCcceEeeccccCcccCcccCCCCCCccEEeecCC
Q 003013 641 LHNLHHLQKISIADCPNLESFPEEGLPSTKLTELSIRECENLKALPNCMHNLTSLLNLEIRRC 703 (857)
Q Consensus 641 ~~~l~~L~~L~l~~c~~l~~l~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c 703 (857)
+..+++|++|+++++ .++.+|..+..+++|+.|+++++ .++.+| .+..+++|++|+++++
T Consensus 16 l~~l~~L~~L~ls~N-~l~~lp~~~~~l~~L~~L~l~~N-~i~~l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 16 LEQLLLVTHLDLSHN-RLRALPPALAALRCLEVLQASDN-ALENVD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp GGGGTTCCEEECCSS-CCCCCCGGGGGCTTCCEEECCSS-CCCCCG-GGTTCSSCCEEECCSS
T ss_pred cccCCCCCEEECCCC-ccCcchhhhhhhhcccccccccc-cccccC-ccccccccCeEECCCC
Confidence 444455555555544 34444444444445555555542 244443 2444444444444444
No 26
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.73 E-value=4.5e-09 Score=94.31 Aligned_cols=106 Identities=13% Similarity=0.109 Sum_probs=72.4
Q ss_pred CCCCCCCCeEEeecCCCCcccCCCCCCCCCcceEeeccccCcccCcccCCCCCCccEEeecCCCCCcccCCC--CCCCCC
Q 003013 641 LHNLHHLQKISIADCPNLESFPEEGLPSTKLTELSIRECENLKALPNCMHNLTSLLNLEIRRCPSVVSFPED--GFPTNL 718 (857)
Q Consensus 641 ~~~l~~L~~L~l~~c~~l~~l~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~~~--~~~~~L 718 (857)
+.++.+|++|++++| .+..++.....+++|++|+++++. ++.++ .+..+++|++|++++| .+..++.. ..+++|
T Consensus 14 ~~n~~~lr~L~L~~n-~I~~i~~~~~~l~~L~~L~Ls~N~-i~~l~-~~~~l~~L~~L~ls~N-~i~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 14 YTNAVRDRELDLRGY-KIPVIENLGATLDQFDAIDFSDNE-IRKLD-GFPLLRRLKTLLVNNN-RICRIGEGLDQALPDL 89 (162)
T ss_dssp EECTTSCEEEECTTS-CCCSCCCGGGGTTCCSEEECCSSC-CCEEC-CCCCCSSCCEEECCSS-CCCEECSCHHHHCTTC
T ss_pred ccCcCcCcEEECCCC-CCCccCccccccccCCEEECCCCC-CCccC-CcccCcchhhhhcccc-cccCCCcccccccccc
Confidence 345667888888887 567776555567788888888854 66664 4778888888888888 46666654 346788
Q ss_pred CeEEecCCCCcccccccccCCCCCccEeEEcC
Q 003013 719 KSLKVHDLKISKALLEWGSNRFTSLRKLEIWG 750 (857)
Q Consensus 719 ~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~ 750 (857)
+.|++++|.....-.-..+..+++|++|++++
T Consensus 90 ~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~ 121 (162)
T d1a9na_ 90 TELILTNNSLVELGDLDPLASLKSLTYLCILR 121 (162)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCS
T ss_pred ccceeccccccccccccccccccccchhhcCC
Confidence 88888887653211112455667777777766
No 27
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.72 E-value=1.7e-08 Score=85.67 Aligned_cols=95 Identities=20% Similarity=0.194 Sum_probs=47.1
Q ss_pred eEEEccCCCCCCcchhhhCCCCCCcEEeEcCCCCCCcCC-CCCCCCCcceeeccccccccccchhhhcCCCCCccEEEEe
Q 003013 390 RFLELSYCQGLTKLPQALLTLCSLTDMKILGCASLVSFP-EVALPSQLRTVRIQECNALKSLPEAWMYNSNSSLESLKIR 468 (857)
Q Consensus 390 ~~L~L~~~~~l~~lp~~~~~l~~L~~L~l~~~~~l~~~~-~~~~l~~L~~L~l~~~~~l~~l~~~~~~~~l~~L~~L~l~ 468 (857)
|+|+|+++ .+..++. +..+.+|++|++++| .++.+| .++.+++|++|+++++. ++.+|. +.. +++|++|+++
T Consensus 1 R~L~Ls~n-~l~~l~~-l~~l~~L~~L~ls~N-~l~~lp~~~~~l~~L~~L~l~~N~-i~~l~~-~~~--l~~L~~L~l~ 73 (124)
T d1dcea3 1 RVLHLAHK-DLTVLCH-LEQLLLVTHLDLSHN-RLRALPPALAALRCLEVLQASDNA-LENVDG-VAN--LPRLQELLLC 73 (124)
T ss_dssp SEEECTTS-CCSSCCC-GGGGTTCCEEECCSS-CCCCCCGGGGGCTTCCEEECCSSC-CCCCGG-GTT--CSSCCEEECC
T ss_pred CEEEcCCC-CCCCCcc-cccCCCCCEEECCCC-ccCcchhhhhhhhccccccccccc-ccccCc-ccc--ccccCeEECC
Confidence 35566654 2344443 555666666666655 344444 24455556666666544 555543 222 5555555555
Q ss_pred cCCCCCCCC---CCCCCCCccEEeccc
Q 003013 469 SCNSLVSFP---EIALPSQLRTVRIQE 492 (857)
Q Consensus 469 ~~~~~~~~~---~~~~~~~L~~L~l~~ 492 (857)
++ .+..++ .+..+++|+.|++++
T Consensus 74 ~N-~i~~~~~~~~l~~~~~L~~L~l~~ 99 (124)
T d1dcea3 74 NN-RLQQSAAIQPLVSCPRLVLLNLQG 99 (124)
T ss_dssp SS-CCCSSSTTGGGGGCTTCCEEECTT
T ss_pred CC-ccCCCCCchhhcCCCCCCEEECCC
Confidence 53 233332 123445555555554
No 28
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.69 E-value=3.6e-08 Score=91.64 Aligned_cols=121 Identities=15% Similarity=0.123 Sum_probs=77.5
Q ss_pred cceEeeccccCcccCcccCCCCCCccEEeecCCCCCcccCCC--CCCCCCCeEEecCCCCcccccccccCCCCCccEeEE
Q 003013 671 LTELSIRECENLKALPNCMHNLTSLLNLEIRRCPSVVSFPED--GFPTNLKSLKVHDLKISKALLEWGSNRFTSLRKLEI 748 (857)
Q Consensus 671 L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~~~--~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l 748 (857)
.+.++.++ ..++.+|..+. +++++|+++++.....++.. ..+++|+.|++++|.... ++...+..+++|++|++
T Consensus 10 ~~~v~Cs~-~~L~~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~-~~~~~~~~~~~L~~L~L 85 (192)
T d1w8aa_ 10 GTTVDCTG-RGLKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTG-IEPNAFEGASHIQELQL 85 (192)
T ss_dssp TTEEECTT-SCCSSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEEC
T ss_pred CCEEEEeC-CCcCccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeecccccccc-ccccccccccccceeee
Confidence 34566655 45777776553 67888888887432233333 235778888887776543 33446677778888888
Q ss_pred cCCCCCCCCCCC----CCCCCCeEecCCCCCCcccCCCC-CCccccCceeccCCC
Q 003013 749 WGPCPDLVSPPP----FPASLTELWISFMPDLECLSSIG-ENLTSLKTLRLSYCR 798 (857)
Q Consensus 749 ~~~~~~l~~~~~----~~~~L~~L~l~~~~~l~~l~~~~-~~l~~L~~L~l~~c~ 798 (857)
++ +.+..+++ .+++|++|++++ +.++.++... ..+++|++|++++++
T Consensus 86 s~--N~l~~l~~~~F~~l~~L~~L~L~~-N~l~~i~~~~f~~l~~L~~l~L~~N~ 137 (192)
T d1w8aa_ 86 GE--NKIKEISNKMFLGLHQLKTLNLYD-NQISCVMPGSFEHLNSLTSLNLASNP 137 (192)
T ss_dssp CS--CCCCEECSSSSTTCTTCCEEECCS-SCCCEECTTSSTTCTTCCEEECTTCC
T ss_pred cc--ccccccCHHHHhCCCcccccccCC-ccccccCHHHhcCCcccccccccccc
Confidence 76 35555544 456777777777 5677776554 667777777777764
No 29
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.58 E-value=1.7e-07 Score=86.94 Aligned_cols=115 Identities=16% Similarity=0.176 Sum_probs=68.9
Q ss_pred CCccccCcCCCCCCCCCeEEeecCCCCcccCC-CCCCCCCcceEeeccccCcccCcccCCCCCCccEEeecCCCCCcccC
Q 003013 632 ENLKSLPAGLHNLHHLQKISIADCPNLESFPE-EGLPSTKLTELSIRECENLKALPNCMHNLTSLLNLEIRRCPSVVSFP 710 (857)
Q Consensus 632 ~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~~-~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~ 710 (857)
.+++.+|..+ .+++++|+++++.....++. .+..+++|+.|+++++......+..+..+++|++|+++++ .++.++
T Consensus 18 ~~L~~iP~~l--p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N-~l~~l~ 94 (192)
T d1w8aa_ 18 RGLKEIPRDI--PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN-KIKEIS 94 (192)
T ss_dssp SCCSSCCSCC--CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC-CCCEEC
T ss_pred CCcCccCCCC--CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc-cccccC
Confidence 4566666655 25677777777643233333 2345667777777775544444556666777777777776 456665
Q ss_pred CC--CCCCCCCeEEecCCCCcccccccccCCCCCccEeEEcC
Q 003013 711 ED--GFPTNLKSLKVHDLKISKALLEWGSNRFTSLRKLEIWG 750 (857)
Q Consensus 711 ~~--~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~ 750 (857)
.. .-+++|++|++++|.. ..+++..+..+++|++|++++
T Consensus 95 ~~~F~~l~~L~~L~L~~N~l-~~i~~~~f~~l~~L~~l~L~~ 135 (192)
T d1w8aa_ 95 NKMFLGLHQLKTLNLYDNQI-SCVMPGSFEHLNSLTSLNLAS 135 (192)
T ss_dssp SSSSTTCTTCCEEECCSSCC-CEECTTSSTTCTTCCEEECTT
T ss_pred HHHHhCCCcccccccCCccc-cccCHHHhcCCcccccccccc
Confidence 54 2346677777766653 444444556666666666665
No 30
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.58 E-value=2e-10 Score=107.41 Aligned_cols=126 Identities=17% Similarity=0.138 Sum_probs=85.1
Q ss_pred ceEEEccC-CCCCCcchhhhCCCCCCcEEeEcCCCCCCcCCCCCCCCCcceeeccccccccccchhhhcCCCCCccEEEE
Q 003013 389 LRFLELSY-CQGLTKLPQALLTLCSLTDMKILGCASLVSFPEVALPSQLRTVRIQECNALKSLPEAWMYNSNSSLESLKI 467 (857)
Q Consensus 389 L~~L~L~~-~~~l~~lp~~~~~l~~L~~L~l~~~~~l~~~~~~~~l~~L~~L~l~~~~~l~~l~~~~~~~~l~~L~~L~l 467 (857)
++.+++++ ...+..++.++..+++|++|++++| .++.++.+..+++|++|++++|. ++.++..... +++|++|++
T Consensus 25 ~~~~~l~~~~~~i~~l~~sl~~L~~L~~L~Ls~n-~I~~i~~l~~l~~L~~L~Ls~N~-i~~i~~~~~~--~~~L~~L~l 100 (198)
T d1m9la_ 25 AEKVELHGMIPPIEKMDATLSTLKACKHLALSTN-NIEKISSLSGMENLRILSLGRNL-IKKIENLDAV--ADTLEELWI 100 (198)
T ss_dssp CSCEECCBCCTTCCCCHHHHHHTTTCCEEECSEE-EESCCCCHHHHTTCCEEECCEEE-ECSCSSHHHH--HHHCCEEEC
T ss_pred cceeeeecccCchhhhhhHHhcccccceeECccc-CCCCcccccCCccccChhhcccc-cccccccccc--ccccccccc
Confidence 34444443 2345667777888888888888876 56677767778888888888876 7777765544 567888888
Q ss_pred ecCCCCCCCCCCCCCCCccEEeccccccccccChhhhccCCCCccEEEecCCC
Q 003013 468 RSCNSLVSFPEIALPSQLRTVRIQECNALKSLPEAWMHNSNSSLESLEIRSCD 520 (857)
Q Consensus 468 ~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~lp~~~~~~~l~~L~~L~l~~c~ 520 (857)
++| .+..++.+..+++|+.|+++++ .+..++.--....+++|+.|++++++
T Consensus 101 ~~N-~i~~l~~~~~l~~L~~L~L~~N-~i~~~~~~~~l~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 101 SYN-QIASLSGIEKLVNLRVLYMSNN-KITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp SEE-ECCCHHHHHHHHHSSEEEESEE-ECCCHHHHHHHTTTTTCSEEEECSSH
T ss_pred ccc-cccccccccccccccccccccc-hhccccccccccCCCccceeecCCCc
Confidence 775 4556655666778888888874 45555431112336888888888753
No 31
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.32 E-value=5.4e-10 Score=104.35 Aligned_cols=91 Identities=20% Similarity=0.178 Sum_probs=44.5
Q ss_pred CccccCcCCCCCCCCCeEEeecCCCCcccCCCCCCCCCcceEeeccccCcccCcccCCCCCCccEEeecCCCCCcccCCC
Q 003013 633 NLKSLPAGLHNLHHLQKISIADCPNLESFPEEGLPSTKLTELSIRECENLKALPNCMHNLTSLLNLEIRRCPSVVSFPED 712 (857)
Q Consensus 633 ~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~~~~L~~L~l~~c~~l~~l~~~~~~l~~L~~L~l~~c~~l~~l~~~ 712 (857)
.++.++..+..+++|++|+++++ .++.++ .+..+++|++|++++|. ++.+|.....+++|++|++++| .++.++..
T Consensus 36 ~i~~l~~sl~~L~~L~~L~Ls~n-~I~~i~-~l~~l~~L~~L~Ls~N~-i~~i~~~~~~~~~L~~L~l~~N-~i~~l~~~ 111 (198)
T d1m9la_ 36 PIEKMDATLSTLKACKHLALSTN-NIEKIS-SLSGMENLRILSLGRNL-IKKIENLDAVADTLEELWISYN-QIASLSGI 111 (198)
T ss_dssp TCCCCHHHHHHTTTCCEEECSEE-EESCCC-CHHHHTTCCEEECCEEE-ECSCSSHHHHHHHCCEEECSEE-ECCCHHHH
T ss_pred chhhhhhHHhcccccceeECccc-CCCCcc-cccCCccccChhhcccc-cccccccccccccccccccccc-cccccccc
Confidence 34445555555666666666655 344443 23345566666666543 4444433333445555555555 33333222
Q ss_pred CCCCCCCeEEecCCC
Q 003013 713 GFPTNLKSLKVHDLK 727 (857)
Q Consensus 713 ~~~~~L~~L~l~~~~ 727 (857)
..+++|+.|++++|.
T Consensus 112 ~~l~~L~~L~L~~N~ 126 (198)
T d1m9la_ 112 EKLVNLRVLYMSNNK 126 (198)
T ss_dssp HHHHHSSEEEESEEE
T ss_pred cccccccccccccch
Confidence 223444555554443
No 32
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.26 E-value=2.3e-06 Score=75.53 Aligned_cols=65 Identities=11% Similarity=0.008 Sum_probs=27.8
Q ss_pred CcccCCCCCCccEEeecCCCCCcccCCC--CCCCCCCeEEecCCCCcccccccccCCCCCccEeEEcC
Q 003013 685 LPNCMHNLTSLLNLEIRRCPSVVSFPED--GFPTNLKSLKVHDLKISKALLEWGSNRFTSLRKLEIWG 750 (857)
Q Consensus 685 l~~~~~~l~~L~~L~l~~c~~l~~l~~~--~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~ 750 (857)
.|..+..+++|++|++.++..++.++.. ..+++|+.|++++|.. ..+.+..+..+++|++|+|++
T Consensus 23 ~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l-~~i~~~~f~~l~~L~~L~Ls~ 89 (156)
T d2ifga3 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGL-RFVAPDAFHFTPRLSRLNLSF 89 (156)
T ss_dssp TTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCC-CEECTTGGGSCSCCCEEECCS
T ss_pred CcccccCccccCeeecCCCccccccCchhhccccccCcceeecccc-CCcccccccccccccceeccC
Confidence 3334444444444444444334444332 1123444444444432 223233445555555555554
No 33
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.15 E-value=4.6e-06 Score=73.52 Aligned_cols=102 Identities=21% Similarity=0.158 Sum_probs=60.5
Q ss_pred ccEEeecCCCCCcccCCC-CCCCCCCeEEecCCCCcccccccccCCCCCccEeEEcCCCCCCCCCCCCCCCCCeEecCCC
Q 003013 695 LLNLEIRRCPSVVSFPED-GFPTNLKSLKVHDLKISKALLEWGSNRFTSLRKLEIWGPCPDLVSPPPFPASLTELWISFM 773 (857)
Q Consensus 695 L~~L~l~~c~~l~~l~~~-~~~~~L~~L~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~l~~~~~~~~~L~~L~l~~~ 773 (857)
.+.++..+. .+...|.. ...++|++|++.+++.+..+....+.++++|+.|++++
T Consensus 10 ~~~l~c~~~-~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~----------------------- 65 (156)
T d2ifga3 10 SSGLRCTRD-GALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVK----------------------- 65 (156)
T ss_dssp SSCEECCSS-CCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCS-----------------------
T ss_pred CCeEEecCC-CCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeec-----------------------
Confidence 344555544 33334433 33578888888888777777766788888888888887
Q ss_pred CCCcccCCCC-CCccccCceeccCCCCCCCCCCCCc-cccccceeecCCc
Q 003013 774 PDLECLSSIG-ENLTSLKTLRLSYCRKLTYFSKEGL-PKSLLRLYINHCP 821 (857)
Q Consensus 774 ~~l~~l~~~~-~~l~~L~~L~l~~c~~l~~ip~~~l-~~~L~~L~i~~c~ 821 (857)
++++.++... ..+++|++|++++| +++.+|...+ ..+|+.|+++++|
T Consensus 66 N~l~~i~~~~f~~l~~L~~L~Ls~N-~l~~l~~~~~~~~~l~~L~L~~Np 114 (156)
T d2ifga3 66 SGLRFVAPDAFHFTPRLSRLNLSFN-ALESLSWKTVQGLSLQELVLSGNP 114 (156)
T ss_dssp SCCCEECTTGGGSCSCCCEEECCSS-CCSCCCSTTTCSCCCCEEECCSSC
T ss_pred cccCCcccccccccccccceeccCC-CCcccChhhhccccccccccCCCc
Confidence 3455554332 45555555555555 4555555322 2345555555544
No 34
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.06 E-value=3.1e-08 Score=106.76 Aligned_cols=57 Identities=23% Similarity=0.098 Sum_probs=30.5
Q ss_pred CCCCeEecCCCCCCcc-----cCCCCCCccccCceeccCCCCCCCCCCCC-------ccccccceeecCCc
Q 003013 763 ASLTELWISFMPDLEC-----LSSIGENLTSLKTLRLSYCRKLTYFSKEG-------LPKSLLRLYINHCP 821 (857)
Q Consensus 763 ~~L~~L~l~~~~~l~~-----l~~~~~~l~~L~~L~l~~c~~l~~ip~~~-------l~~~L~~L~i~~c~ 821 (857)
+.|++|++++| +++. ++..+..+++|++|++++| .+..-.... -...|+.|++.++.
T Consensus 369 ~~L~~L~Ls~n-~i~~~~~~~l~~~l~~~~~L~~L~Ls~N-~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~ 437 (460)
T d1z7xw1 369 SVLRVLWLADC-DVSDSSCSSLAATLLANHSLRELDLSNN-CLGDAGILQLVESVRQPGCLLEQLVLYDIY 437 (460)
T ss_dssp CCCCEEECTTS-CCCHHHHHHHHHHHHHCCCCCEEECCSS-SCCHHHHHHHHHHHTSTTCCCCEEECTTCC
T ss_pred CCCCEEECCCC-CCChHHHHHHHHHHhcCCCCCEEECCCC-cCCHHHHHHHHHHHHhCCCccCEEECCCCC
Confidence 44666666665 4543 2222245677888888877 443210000 11357788887764
No 35
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.02 E-value=8.3e-08 Score=103.29 Aligned_cols=15 Identities=7% Similarity=0.213 Sum_probs=8.7
Q ss_pred hhcCCCCCeEeccCC
Q 003013 352 EQDIISLNRLQIKGC 366 (857)
Q Consensus 352 ~~~~~~L~~L~l~~~ 366 (857)
+..++++++|++++|
T Consensus 23 ~~~l~~l~~L~L~~~ 37 (460)
T d1z7xw1 23 LPLLQQCQVVRLDDC 37 (460)
T ss_dssp HHHHTTCSEEEEESS
T ss_pred HHhCCCCCEEEeCCC
Confidence 345556666666665
No 36
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=97.70 E-value=4.6e-05 Score=74.65 Aligned_cols=102 Identities=15% Similarity=0.063 Sum_probs=68.9
Q ss_pred eeecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcccchhccCC-ceEEEEeCCCCCHHHHHHHHH
Q 003013 144 KVYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYNDDRVQRHYE-IKAWTCVSEDFDVFGVSKFIL 222 (857)
Q Consensus 144 ~~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd-~~~wv~vs~~~~~~~i~~~i~ 222 (857)
.++|||.+.++|..+|...-...+.....+-|+|+.|+||||+|+.+.+. ....+. .++|+..............+.
T Consensus 17 ~l~~Re~ei~~l~~~l~~~l~~~~~~~~~lll~GppGtGKT~l~~~l~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (276)
T d1fnna2 17 RLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWEL--YKDKTTARFVYINGFIYRNFTAIIGEIA 94 (276)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHHHHHHHH--HTTSCCCEEEEEETTTCCSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCCCCCceEEECCCCCCHHHHHHHHHHH--HhcccCCcEEEecchhhhhhhhhhhhhH
Confidence 48999999999999985310001235678899999999999999999984 333333 234566666667778888888
Q ss_pred HHccCCCCCCCCChHHHHHHHHhhc
Q 003013 223 NSIAKDQSNNDDDLNSLQVKLKERL 247 (857)
Q Consensus 223 ~~l~~~~~~~~~~~~~~~~~l~~~l 247 (857)
....................+.+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (276)
T d1fnna2 95 RSLNIPFPRRGLSRDEFLALLVEHL 119 (276)
T ss_dssp HHTTCCCCSSCCCHHHHHHHHHHHH
T ss_pred HhhhhhhhhhccchhHHHHHHHHHH
Confidence 8777655434445555555444433
No 37
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=97.59 E-value=3.7e-06 Score=85.96 Aligned_cols=82 Identities=18% Similarity=0.212 Sum_probs=37.7
Q ss_pred CCCCcceEeeccccCc----ccCcccCCCCCCccEEeecCCCCCccc-----CC---CCCCCCCCeEEecCCCCccc---
Q 003013 667 PSTKLTELSIRECENL----KALPNCMHNLTSLLNLEIRRCPSVVSF-----PE---DGFPTNLKSLKVHDLKISKA--- 731 (857)
Q Consensus 667 ~~~~L~~L~l~~c~~l----~~l~~~~~~l~~L~~L~l~~c~~l~~l-----~~---~~~~~~L~~L~l~~~~~~~~--- 731 (857)
..++|+.|++++|..- ..+...+..+++|++|++++|. +... .. ......|++|++++|..-..
T Consensus 213 ~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~-i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~ 291 (344)
T d2ca6a1 213 YCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCL-LSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVR 291 (344)
T ss_dssp GCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCC-CCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHH
T ss_pred chhhhcccccccccccccccccccccccccccchhhhhhcCc-cCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHH
Confidence 3445555555544311 1122344556666666666663 2211 00 01124577777777654221
Q ss_pred -cccccc-CCCCCccEeEEcC
Q 003013 732 -LLEWGS-NRFTSLRKLEIWG 750 (857)
Q Consensus 732 -~~~~~~-~~l~~L~~L~l~~ 750 (857)
+.. .+ .++++|+.|+|++
T Consensus 292 ~l~~-~l~~~~~~L~~L~l~~ 311 (344)
T d2ca6a1 292 TLKT-VIDEKMPDLLFLELNG 311 (344)
T ss_dssp HHHH-HHHHHCTTCCEEECTT
T ss_pred HHHH-HHHccCCCCCEEECCC
Confidence 111 11 1345666666665
No 38
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=97.34 E-value=0.0002 Score=70.33 Aligned_cols=104 Identities=17% Similarity=0.167 Sum_probs=66.5
Q ss_pred CeeecchhHHHHHHHHHhc----CCCCCCCCceEEEEeccCCcchHHHHHHHhcccchh----ccCCceEEEEeCCCCCH
Q 003013 143 AKVYGREKEKEEIIELLLN----DDLRADDGFSVISINGMAGVGKTTLAQLVYNDDRVQ----RHYEIKAWTCVSEDFDV 214 (857)
Q Consensus 143 ~~~vG~~~~~~~i~~~L~~----~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~~~~~----~~Fd~~~wv~vs~~~~~ 214 (857)
+.++||+.+.++|.+++.. +.. ......++.|+|..|+||||+|+.+.+..... .....++++........
T Consensus 16 ~~~~~Re~e~~~l~~~l~~~~~~~~~-~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 94 (287)
T d1w5sa2 16 PELRVRRGEAEALARIYLNRLLSGAG-LSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNL 94 (287)
T ss_dssp SSCSSSCHHHHHHHHHHHHHHHTSSC-BCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCSH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCC-CCCcceEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCceeeeeccccccch
Confidence 4589999999999887642 211 11123356778999999999999999853211 11234455666666667
Q ss_pred HHHHHHHHHHccCCCCCCCCChHHHHHHHHhhc
Q 003013 215 FGVSKFILNSIAKDQSNNDDDLNSLQVKLKERL 247 (857)
Q Consensus 215 ~~i~~~i~~~l~~~~~~~~~~~~~~~~~l~~~l 247 (857)
......+...+.................+.+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 127 (287)
T d1w5sa2 95 YTILSLIVRQTGYPIQVRGAPALDILKALVDNL 127 (287)
T ss_dssp HHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHH
T ss_pred hhHHHHHhhhcccccccccchHHHHHHHHHHHH
Confidence 777777777776655434455555555555443
No 39
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=97.07 E-value=0.00013 Score=69.43 Aligned_cols=51 Identities=24% Similarity=0.367 Sum_probs=39.2
Q ss_pred CCeeecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 142 EAKVYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 142 ~~~~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-+++||.++.++++..++..... ....+.-+-++|+.|+||||+|+.+.+.
T Consensus 8 ~ddivGq~~~~~~L~~~i~~~~~-~~~~~~~~Ll~GPpG~GKTtla~~la~~ 58 (239)
T d1ixsb2 8 LDEYIGQERLKQKLRVYLEAAKA-RKEPLEHLLLFGPPGLGKTTLAHVIAHE 58 (239)
T ss_dssp GGGSCSCHHHHHHHHHHHHHHTT-SSSCCCCEEEECCTTSCHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHh-cCCCCCeEEEECCCCCCHHHHHHHHHHH
Confidence 35699999999998888754221 2224556679999999999999999874
No 40
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=96.96 E-value=9.9e-05 Score=72.45 Aligned_cols=42 Identities=24% Similarity=0.434 Sum_probs=35.0
Q ss_pred CCeeecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 142 EAKVYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 142 ~~~~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.+++|||+++.+++.+. .-+.|.|+|.+|+|||||++++.++
T Consensus 11 ~~~f~GR~~el~~l~~~----------~~~~i~i~G~~G~GKTsLl~~~~~~ 52 (283)
T d2fnaa2 11 RKDFFDREKEIEKLKGL----------RAPITLVLGLRRTGKSSIIKIGINE 52 (283)
T ss_dssp GGGSCCCHHHHHHHHHT----------CSSEEEEEESTTSSHHHHHHHHHHH
T ss_pred hhhCCChHHHHHHHHhc----------cCCEEEEEcCCCCcHHHHHHHHHHH
Confidence 46799999999988763 1258899999999999999998773
No 41
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.93 E-value=0.00025 Score=66.84 Aligned_cols=46 Identities=17% Similarity=0.294 Sum_probs=38.2
Q ss_pred CCeeecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 142 EAKVYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 142 ~~~~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-+++||.++.++.+..|+... .+..+=++|..|+||||+|+.+.+.
T Consensus 13 ~~divg~~~~~~~L~~~i~~~------~~~~lLl~Gp~G~GKttl~~~la~~ 58 (227)
T d1sxjc2 13 LDEVYGQNEVITTVRKFVDEG------KLPHLLFYGPPGTGKTSTIVALARE 58 (227)
T ss_dssp GGGCCSCHHHHHHHHHHHHTT------CCCCEEEECSSSSSHHHHHHHHHHH
T ss_pred HHHccCcHHHHHHHHHHHHcC------CCCeEEEECCCCCChhHHHHHHHHH
Confidence 356999999999999999654 3333559999999999999999884
No 42
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=96.81 E-value=0.00017 Score=68.64 Aligned_cols=51 Identities=24% Similarity=0.394 Sum_probs=38.6
Q ss_pred CCeeecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 142 EAKVYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 142 ~~~~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-+++||.++.++++..|+..... .++...-+-++|..|+||||+|+.+.+.
T Consensus 8 ~~divGqe~~~~~l~~~i~~~~~-~~~~~~~~L~~GPpGtGKT~lA~~la~~ 58 (238)
T d1in4a2 8 LDEFIGQENVKKKLSLALEAAKM-RGEVLDHVLLAGPPGLGKTTLAHIIASE 58 (238)
T ss_dssp GGGCCSCHHHHHHHHHHHHHHHH-HTCCCCCEEEESSTTSSHHHHHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHHHHHh-cCCCCCeEEEECCCCCcHHHHHHHHHhc
Confidence 46699999999999998853211 1123445669999999999999999873
No 43
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.80 E-value=0.00039 Score=65.24 Aligned_cols=46 Identities=20% Similarity=0.424 Sum_probs=38.4
Q ss_pred CCeeecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 142 EAKVYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 142 ~~~~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-+++||.++.++++..|+... .+.-+-++|..|+||||+|+.+.+.
T Consensus 14 ~~d~ig~~~~~~~L~~~~~~~------~~~~~ll~Gp~G~GKTt~a~~la~~ 59 (224)
T d1sxjb2 14 LSDIVGNKETIDRLQQIAKDG------NMPHMIISGMPGIGKTTSVHCLAHE 59 (224)
T ss_dssp GGGCCSCTHHHHHHHHHHHSC------CCCCEEEECSTTSSHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHcC------CCCeEEEECCCCCCchhhHHHHHHH
Confidence 466999999999999999654 4444669999999999999998774
No 44
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=96.76 E-value=0.0007 Score=60.20 Aligned_cols=57 Identities=23% Similarity=0.264 Sum_probs=41.9
Q ss_pred eeecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhccc---ch-hccCCceEEE
Q 003013 144 KVYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYNDD---RV-QRHYEIKAWT 206 (857)
Q Consensus 144 ~~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~~---~~-~~~Fd~~~wv 206 (857)
.+||||++.++++..|.... -.-+-++|-+|||||+++..+...- ++ ...-+.++|.
T Consensus 23 ~~igRd~Ei~~l~~iL~r~~------k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ 83 (195)
T d1jbka_ 23 PVIGRDEEIRRTIQVLQRRT------KNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA 83 (195)
T ss_dssp CCCSCHHHHHHHHHHHTSSS------SCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEE
T ss_pred CCcCcHHHHHHHHHHHhccC------CCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEE
Confidence 38999999999999996542 2456799999999999987776621 11 2345666764
No 45
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.72 E-value=0.00058 Score=64.72 Aligned_cols=46 Identities=15% Similarity=0.208 Sum_probs=38.3
Q ss_pred CCeeecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 142 EAKVYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 142 ~~~~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-++++|.++.++.+..|+... ....+-++|..|+||||+|+.+.+.
T Consensus 11 ~~diig~~~~~~~l~~~i~~~------~~~~lll~Gp~G~GKTtl~~~i~~~ 56 (237)
T d1sxjd2 11 LDEVTAQDHAVTVLKKTLKSA------NLPHMLFYGPPGTGKTSTILALTKE 56 (237)
T ss_dssp TTTCCSCCTTHHHHHHHTTCT------TCCCEEEECSTTSSHHHHHHHHHHH
T ss_pred HHHccCcHHHHHHHHHHHHcC------CCCeEEEECCCCCChHHHHHHHHHH
Confidence 456999999999999999543 4444779999999999999999884
No 46
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.71 E-value=0.0005 Score=64.86 Aligned_cols=46 Identities=22% Similarity=0.309 Sum_probs=39.3
Q ss_pred CCeeecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 142 EAKVYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 142 ~~~~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.++++|.++.++++..|+... ...-+-++|..|+||||+|+.+.+.
T Consensus 23 ~~diig~~~~~~~l~~~i~~~------~~~~lll~Gp~G~GKTtla~~iak~ 68 (231)
T d1iqpa2 23 LDDIVGQEHIVKRLKHYVKTG------SMPHLLFAGPPGVGKTTAALALARE 68 (231)
T ss_dssp TTTCCSCHHHHHHHHHHHHHT------CCCEEEEESCTTSSHHHHHHHHHHH
T ss_pred HHHccCcHHHHHHHHHHHHcC------CCCeEEEECCCCCcHHHHHHHHHHH
Confidence 467999999999999999654 4455779999999999999999873
No 47
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=96.70 E-value=0.00094 Score=67.35 Aligned_cols=11 Identities=27% Similarity=0.314 Sum_probs=7.3
Q ss_pred CCccEEEEeCC
Q 003013 575 ATLEHLEVSSC 585 (857)
Q Consensus 575 ~~L~~L~l~~~ 585 (857)
++|+.|+++++
T Consensus 302 ~~L~~L~l~~N 312 (344)
T d2ca6a1 302 PDLLFLELNGN 312 (344)
T ss_dssp TTCCEEECTTS
T ss_pred CCCCEEECCCC
Confidence 46777777664
No 48
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.61 E-value=0.00042 Score=66.47 Aligned_cols=47 Identities=15% Similarity=0.128 Sum_probs=36.6
Q ss_pred CCeeecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 142 EAKVYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 142 ~~~~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-++++|.++.++.+..++.... ...-+-|+|++|+||||+|+++.+.
T Consensus 10 ~~diig~~~~~~~L~~~~~~~~-----~~~~lll~Gp~G~GKTt~~~~la~~ 56 (252)
T d1sxje2 10 LNALSHNEELTNFLKSLSDQPR-----DLPHLLLYGPNGTGKKTRCMALLES 56 (252)
T ss_dssp GGGCCSCHHHHHHHHTTTTCTT-----CCCCEEEECSTTSSHHHHHHTHHHH
T ss_pred HHHccCcHHHHHHHHHHHHcCC-----CCCeEEEECCCCCCHHHHHHHHHHh
Confidence 4569999988888887774332 3344569999999999999999874
No 49
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.55 E-value=0.00098 Score=63.79 Aligned_cols=51 Identities=27% Similarity=0.355 Sum_probs=40.4
Q ss_pred CCeeecchhHHHHHHHHHhc------------CCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 142 EAKVYGREKEKEEIIELLLN------------DDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 142 ~~~~vG~~~~~~~i~~~L~~------------~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-++++|.++.++++.+||.. ... +......+-++|..|+||||+|+.+.+.
T Consensus 13 ~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~-~~~~~~~lll~GPpG~GKTt~a~~la~~ 75 (253)
T d1sxja2 13 LQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKD-GSGVFRAAMLYGPPGIGKTTAAHLVAQE 75 (253)
T ss_dssp GGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTT-STTSCSEEEEECSTTSSHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHhhhhcchhhhhhhccc-CCCCCceEEEECCCCCCHHHHHHHHHHH
Confidence 46799999999999999853 110 1234567899999999999999999884
No 50
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=96.25 E-value=0.0068 Score=57.09 Aligned_cols=78 Identities=23% Similarity=0.227 Sum_probs=51.4
Q ss_pred eeecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhccc---c-hhccCCceEEEE-e----C---CC
Q 003013 144 KVYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYNDD---R-VQRHYEIKAWTC-V----S---ED 211 (857)
Q Consensus 144 ~~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~~---~-~~~~Fd~~~wv~-v----s---~~ 211 (857)
.++|||++.++++..|.... + .-+-++|.+|||||+++..+.... . -....+..+|.. + + -.
T Consensus 19 ~~igRd~Ei~~l~~iL~r~~-----k-~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~liag~~~~ 92 (268)
T d1r6bx2 19 PLIGREKELERAIQVLCRRR-----K-NNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYR 92 (268)
T ss_dssp CCCSCHHHHHHHHHHHTSSS-----S-CEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC---CCCCCS
T ss_pred cccChHHHHHHHHHHHhcCc-----c-CCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeeechHhccCccc
Confidence 38999999999999996542 2 345599999999999988776631 1 122345667632 1 1 12
Q ss_pred CCHHHHHHHHHHHccC
Q 003013 212 FDVFGVSKFILNSIAK 227 (857)
Q Consensus 212 ~~~~~i~~~i~~~l~~ 227 (857)
-+.+.-.+.|++.+..
T Consensus 93 g~~e~r~~~i~~~~~~ 108 (268)
T d1r6bx2 93 GDFEKRFKALLKQLEQ 108 (268)
T ss_dssp SCHHHHHHHHHHHHSS
T ss_pred hhHHHHHHHHHHHhhc
Confidence 2566666666666643
No 51
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=96.10 E-value=0.0023 Score=64.25 Aligned_cols=56 Identities=25% Similarity=0.354 Sum_probs=40.4
Q ss_pred eecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHH----HhcccchhccCCceEEE
Q 003013 145 VYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQL----VYNDDRVQRHYEIKAWT 206 (857)
Q Consensus 145 ~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~----v~~~~~~~~~Fd~~~wv 206 (857)
+||||.+.++++..|..... .-+-++|.+|||||+++.. |.+..--....+.++|.
T Consensus 24 ~~gr~~ei~~~~~~L~r~~k------~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ 83 (387)
T d1qvra2 24 VIGRDEEIRRVIQILLRRTK------NNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVS 83 (387)
T ss_dssp CCSCHHHHHHHHHHHHCSSC------CCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEE
T ss_pred CcCcHHHHHHHHHHHhcCCC------CCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEE
Confidence 88999999999999975421 2336779999999997754 44432234456777874
No 52
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.10 E-value=0.0043 Score=56.38 Aligned_cols=41 Identities=27% Similarity=0.365 Sum_probs=30.1
Q ss_pred hHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 150 KEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 150 ~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+..+.+.+....- ...+.-+|||.|..|.||||||+++...
T Consensus 5 ~~~~~~~~~~~~~---~~~~~~iIgI~G~~GSGKSTla~~L~~~ 45 (198)
T d1rz3a_ 5 DRIDFLCKTILAI---KTAGRLVLGIDGLSRSGKTTLANQLSQT 45 (198)
T ss_dssp HHHHHHHHHHHTS---CCSSSEEEEEEECTTSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc---cCCCCEEEEEECCCCCCHHHHHHHHHHH
Confidence 3445555555443 2346779999999999999999999773
No 53
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.08 E-value=0.0004 Score=61.11 Aligned_cols=66 Identities=17% Similarity=0.120 Sum_probs=39.3
Q ss_pred hhhhCCCCCCcEEeEcCCCCCCcCCC----CCCCCCcceeeccccccccccchhhhcCCCCCccEEEEecCCC
Q 003013 404 PQALLTLCSLTDMKILGCASLVSFPE----VALPSQLRTVRIQECNALKSLPEAWMYNSNSSLESLKIRSCNS 472 (857)
Q Consensus 404 p~~~~~l~~L~~L~l~~~~~l~~~~~----~~~l~~L~~L~l~~~~~l~~l~~~~~~~~l~~L~~L~l~~~~~ 472 (857)
+.....+++|++|++++| .++.++. +..+++|+.|+++++. ++++++.... ...+|+.|++++++.
T Consensus 58 ~~~~~~~~~L~~L~Ls~N-~i~~l~~~~~~~~~l~~L~~L~Ls~N~-i~~l~~l~~l-~~~~L~~L~L~~Npl 127 (162)
T d1koha1 58 RIIEENIPELLSLNLSNN-RLYRLDDMSSIVQKAPNLKILNLSGNE-LKSERELDKI-KGLKLEELWLDGNSL 127 (162)
T ss_dssp HHHHHHCTTCCCCCCCSS-CCCCCSGGGTHHHHSTTCCCCCCTTSC-CCCGGGHHHH-TTCCCSSCCCTTSTT
T ss_pred HHHHHhCCCCCEeeCCCc-cccCCchhHHHHhhCCcccccccccCc-cccchhhhhh-hccccceeecCCCCc
Confidence 333356778888888877 4555443 2346777777777765 6666553221 134567777766543
No 54
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=96.05 E-value=0.0013 Score=59.57 Aligned_cols=25 Identities=20% Similarity=0.145 Sum_probs=22.1
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-++.|.|.|+.|+||||||+.+.+.
T Consensus 6 ~~K~I~i~G~~GsGKTTla~~La~~ 30 (192)
T d1lw7a2 6 FAKTVAILGGESSGKSVLVNKLAAV 30 (192)
T ss_dssp TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred cceEEEEECCCCCCHHHHHHHHHHH
Confidence 3688999999999999999988773
No 55
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=95.88 E-value=0.0017 Score=57.43 Aligned_cols=24 Identities=25% Similarity=0.444 Sum_probs=21.7
Q ss_pred ceEEEEeccCCcchHHHHHHHhcc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+.||+|.|..|.|||||++++.+.
T Consensus 2 ~Pvi~itG~~GSGKTTL~~~L~~~ 25 (170)
T d1np6a_ 2 IPLLAFAAWSGTGKTTLLKKLIPA 25 (170)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHH
Confidence 469999999999999999999873
No 56
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=95.75 E-value=0.0043 Score=59.79 Aligned_cols=46 Identities=22% Similarity=0.370 Sum_probs=33.9
Q ss_pred cchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 147 GREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 147 G~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+.++...+.++.+..+.. +.+..+.|-++|..|+||||||+.+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~-~~~~P~~ilL~GpPGtGKT~la~~la~~ 55 (273)
T d1gvnb_ 10 QFENRLNDNLEELIQGKK-AVESPTAFLLGGQPGSGKTSLRSAIFEE 55 (273)
T ss_dssp HHHHHHHHHHHHHHTTCC-CCSSCEEEEEECCTTSCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccc-CCCCCEEEEEECCCCCCHHHHHHHHHHH
Confidence 344555666666655443 4446677889999999999999999883
No 57
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=95.73 E-value=0.0024 Score=55.30 Aligned_cols=22 Identities=32% Similarity=0.404 Sum_probs=19.5
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
++|.|.|+.|.||||+|+.+..
T Consensus 3 klIii~G~pGsGKTTla~~L~~ 24 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIA 24 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHH
Confidence 5788999999999999998754
No 58
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=95.64 E-value=0.0019 Score=56.84 Aligned_cols=23 Identities=26% Similarity=0.404 Sum_probs=20.1
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+.|-+.|+.|+||||+|+.+.+.
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~ 25 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQ 25 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHH
Confidence 36788899999999999998773
No 59
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=95.59 E-value=0.0045 Score=58.14 Aligned_cols=53 Identities=34% Similarity=0.399 Sum_probs=37.1
Q ss_pred ccCCeeecchhHHHHHHHHH---hcCC----CCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 140 VNEAKVYGREKEKEEIIELL---LNDD----LRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 140 ~~~~~~vG~~~~~~~i~~~L---~~~~----~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+..++++|.|+.+++|.+.+ .... . +-...+-|-++|..|+|||++|+.+.+.
T Consensus 6 ~~~~di~G~~~~k~~l~~~i~~l~~~~~~~~~-g~~~~~giLl~GppGtGKT~la~aia~~ 65 (247)
T d1ixza_ 6 VTFKDVAGAEEAKEELKEIVEFLKNPSRFHEM-GARIPKGVLLVGPPGVGKTHLARAVAGE 65 (247)
T ss_dssp CCGGGCCSCHHHHHHHHHHHHHHHCHHHHHHT-TCCCCSEEEEECCTTSSHHHHHHHHHHH
T ss_pred CcHHHHccHHHHHHHHHHHHHHHHCHHHHHHc-CCCCCceEEEecCCCCChhHHHHHHHHH
Confidence 44567999998887765533 2210 0 1123456889999999999999999984
No 60
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=95.57 E-value=0.0028 Score=56.23 Aligned_cols=22 Identities=36% Similarity=0.487 Sum_probs=20.0
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
++|.|.|+.|+||||+|+.+..
T Consensus 3 klI~i~G~~GsGKTTva~~L~~ 24 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAA 24 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHH
Confidence 5899999999999999998865
No 61
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=95.49 E-value=0.0016 Score=63.90 Aligned_cols=49 Identities=29% Similarity=0.319 Sum_probs=35.9
Q ss_pred eecchhHHHHHHHHHhc----CCC----CCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 145 VYGREKEKEEIIELLLN----DDL----RADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 145 ~vG~~~~~~~i~~~L~~----~~~----~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
++|.++.++.+..++.. ..- +.+...+-|.++|+.|+|||+||+++.+.
T Consensus 16 ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~ 72 (309)
T d1ofha_ 16 IIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKL 72 (309)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhc
Confidence 89999999998876621 100 00113467789999999999999999883
No 62
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=95.47 E-value=0.004 Score=55.61 Aligned_cols=35 Identities=14% Similarity=0.098 Sum_probs=26.6
Q ss_pred CceEEEEeccCCcchHHHHHHHhcccchhc-cCCceEE
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYNDDRVQR-HYEIKAW 205 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~-~Fd~~~w 205 (857)
.-.+|-|.|+.|+||||+|+++.. +... .++...+
T Consensus 5 ~g~~I~l~G~~GsGKTTia~~La~--~L~~~~~~~~~~ 40 (183)
T d1m8pa3 5 QGFTIFLTGYMNSGKDAIARALQV--TLNQQGGRSVSL 40 (183)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHH--HHHHHCSSCEEE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHH--HHhhcCCCchhh
Confidence 558999999999999999999987 3432 3444444
No 63
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=95.35 E-value=0.0036 Score=54.94 Aligned_cols=23 Identities=30% Similarity=0.300 Sum_probs=21.3
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+||||.|..|.|||||+.++...
T Consensus 2 kii~I~G~~gSGKTTli~~l~~~ 24 (165)
T d1xjca_ 2 NVWQVVGYKHSGKTTLMEKWVAA 24 (165)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHH
Confidence 69999999999999999999873
No 64
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.34 E-value=0.0055 Score=58.18 Aligned_cols=51 Identities=27% Similarity=0.291 Sum_probs=37.2
Q ss_pred CCeeecchhHHHHHHHHHh----cCC----CCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 142 EAKVYGREKEKEEIIELLL----NDD----LRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 142 ~~~~vG~~~~~~~i~~~L~----~~~----~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.++++|.|..+++|.+.+. ..+ . +-...+-|-++|..|+|||++|+++.+.
T Consensus 3 ~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~-g~~~~~giLL~GppGtGKT~l~~ala~~ 61 (258)
T d1e32a2 3 YDDVGGCRKQLAQIKEMVELPLRHPALFKAI-GVKPPRGILLYGPPGTGKTLIARAVANE 61 (258)
T ss_dssp GGGCCSCSHHHHHHHHHHHHHHHCHHHHHHC-CCCCCCEEEEECCTTSSHHHHHHHHHHH
T ss_pred hhhhccHHHHHHHHHHHHHHHhcCHHHHHhC-CCCCCceeEEecCCCCCchHHHHHHHHH
Confidence 4579999999988888642 110 0 1113456889999999999999999883
No 65
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=95.29 E-value=0.0034 Score=55.56 Aligned_cols=22 Identities=41% Similarity=0.579 Sum_probs=19.4
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
..|.|.|+.|+||||+|+.+.+
T Consensus 5 ~~I~i~G~pGsGKTTia~~La~ 26 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGKELAS 26 (173)
T ss_dssp CCEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHH
Confidence 3577999999999999999876
No 66
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=95.29 E-value=0.0035 Score=54.71 Aligned_cols=21 Identities=43% Similarity=0.634 Sum_probs=19.0
Q ss_pred EEEeccCCcchHHHHHHHhcc
Q 003013 173 ISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 173 i~I~GmgGvGKTTLa~~v~~~ 193 (857)
|.|.||+|+||||+|+.+...
T Consensus 3 I~liG~~GsGKsTi~k~La~~ 23 (161)
T d1viaa_ 3 IVFIGFMGSGKSTLARALAKD 23 (161)
T ss_dssp EEEECCTTSCHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 778899999999999999874
No 67
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.29 E-value=0.0045 Score=55.60 Aligned_cols=23 Identities=35% Similarity=0.424 Sum_probs=21.0
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+.|.|.|.+|+|||||++++...
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~ 24 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEV 24 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHH
Confidence 46899999999999999999884
No 68
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=95.22 E-value=0.0076 Score=56.54 Aligned_cols=46 Identities=28% Similarity=0.301 Sum_probs=38.2
Q ss_pred CCeeecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhc
Q 003013 142 EAKVYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 142 ~~~~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
-++++|.++.++.+..++..+. -.+.+-|+|..|+||||+|+.+.+
T Consensus 11 ~~dlig~~~~~~~L~~~i~~~~-----~~~~~Ll~Gp~G~GKtt~a~~~~~ 56 (239)
T d1njfa_ 11 FADVVGQEHVLTALANGLSLGR-----IHHAYLFSGTRGVGKTSIARLLAK 56 (239)
T ss_dssp GGGSCSCHHHHHHHHHHHHTTC-----CCSEEEEECSTTSSHHHHHHHHHH
T ss_pred HHHccChHHHHHHHHHHHHcCC-----CCeeEEEECCCCCcHHHHHHHHHH
Confidence 3579999999999999996542 245677999999999999999866
No 69
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=95.12 E-value=0.0064 Score=53.63 Aligned_cols=26 Identities=23% Similarity=0.452 Sum_probs=23.3
Q ss_pred CCCceEEEEeccCCcchHHHHHHHhc
Q 003013 167 DDGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 167 ~~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
+.+.++|.|.|+.|.||||+|+.+..
T Consensus 3 ~~~~~iivl~G~~GsGKsT~a~~La~ 28 (171)
T d1knqa_ 3 NHDHHIYVLMGVSGSGKSAVASEVAH 28 (171)
T ss_dssp CTTSEEEEEECSTTSCHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 35779999999999999999999876
No 70
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.11 E-value=0.0058 Score=55.29 Aligned_cols=35 Identities=20% Similarity=0.137 Sum_probs=25.8
Q ss_pred CceEEEEeccCCcchHHHHHHHhcccchhccCCceEE
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAW 205 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~w 205 (857)
.-.+|-+.|+.|.||||+|+++.. +....+....+
T Consensus 18 ~g~vI~L~G~pGSGKTTiAk~La~--~l~~~~~~~~~ 52 (195)
T d1x6va3 18 RGCTVWLTGLSGAGKTTVSMALEE--YLVCHGIPCYT 52 (195)
T ss_dssp CCEEEEEESSCHHHHHHHHHHHHH--HHHHTTCCEEE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHH--HHHhcCCCccc
Confidence 456888999999999999999977 34433433333
No 71
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=95.04 E-value=0.008 Score=56.64 Aligned_cols=52 Identities=31% Similarity=0.361 Sum_probs=36.3
Q ss_pred CCeeecchhHHHHHHHH---HhcCC--CC-CCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 142 EAKVYGREKEKEEIIEL---LLNDD--LR-ADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 142 ~~~~vG~~~~~~~i~~~---L~~~~--~~-~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.++++|.|..+++|.+. +.... .+ +-...+-|-++|..|+|||++|+.+.+.
T Consensus 11 ~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~ 68 (256)
T d1lv7a_ 11 FADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGE 68 (256)
T ss_dssp GGGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHH
T ss_pred HHHHhchHHHHHHHHHHHHHHHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHH
Confidence 46799999888777554 33211 00 1123466789999999999999999874
No 72
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=94.99 E-value=0.0068 Score=54.83 Aligned_cols=25 Identities=28% Similarity=0.304 Sum_probs=22.8
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+..+|.|+|+.|.||||+|+.+.+.
T Consensus 5 kp~iI~i~G~pGSGKsT~a~~La~~ 29 (194)
T d1qf9a_ 5 KPNVVFVLGGPGSGKGTQCANIVRD 29 (194)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHH
Confidence 6789999999999999999998763
No 73
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=94.96 E-value=0.0065 Score=53.76 Aligned_cols=25 Identities=32% Similarity=0.478 Sum_probs=21.7
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+.-.|.|.|+.|+||||+|+.+.+.
T Consensus 4 k~~~I~i~G~~GsGKTT~~~~La~~ 28 (174)
T d1y63a_ 4 KGINILITGTPGTGKTSMAEMIAAE 28 (174)
T ss_dssp SSCEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHH
Confidence 4567899999999999999998773
No 74
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.96 E-value=0.0049 Score=54.05 Aligned_cols=21 Identities=24% Similarity=0.487 Sum_probs=17.9
Q ss_pred EEEeccCCcchHHHHHHHhcc
Q 003013 173 ISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 173 i~I~GmgGvGKTTLa~~v~~~ 193 (857)
|-+.||.|+||||+|+.+.+.
T Consensus 4 IvliG~~G~GKSTig~~La~~ 24 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAKA 24 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 446699999999999999873
No 75
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=94.94 E-value=0.0052 Score=55.24 Aligned_cols=23 Identities=39% Similarity=0.716 Sum_probs=21.1
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
++|.|.|+.|+||||+++.+...
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~ 24 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDN 24 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHH
Confidence 68999999999999999999773
No 76
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.73 E-value=0.0085 Score=54.22 Aligned_cols=26 Identities=38% Similarity=0.471 Sum_probs=23.5
Q ss_pred CCceEEEEeccCCcchHHHHHHHhcc
Q 003013 168 DGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 168 ~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
++..||.|.|+.|.||||+|+.+.+.
T Consensus 6 ~~~~iI~i~GppGSGKsT~a~~La~~ 31 (196)
T d1ukza_ 6 DQVSVIFVLGGPGAGKGTQCEKLVKD 31 (196)
T ss_dssp TTCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHH
Confidence 47899999999999999999998773
No 77
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=94.71 E-value=0.022 Score=51.86 Aligned_cols=61 Identities=26% Similarity=0.261 Sum_probs=37.4
Q ss_pred CCeeecchhH--HHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEe
Q 003013 142 EAKVYGREKE--KEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCV 208 (857)
Q Consensus 142 ~~~~vG~~~~--~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~v 208 (857)
++-+||.... ...+.++....+ .....+-|||..|+|||.|++++.+. .......+++++.
T Consensus 10 dnF~vg~~N~~a~~~~~~~~~~~~----~~~n~l~l~G~~G~GKTHLl~A~~~~--~~~~~~~~~~~~~ 72 (213)
T d1l8qa2 10 ENFIVGEGNRLAYEVVKEALENLG----SLYNPIFIYGSVGTGKTHLLQAAGNE--AKKRGYRVIYSSA 72 (213)
T ss_dssp SSCCCCTTTHHHHHHHHHHHHTTT----TSCSSEEEECSSSSSHHHHHHHHHHH--HHHTTCCEEEEEH
T ss_pred hhccCCCcHHHHHHHHHHHHhCcC----CCCCcEEEECCCCCcHHHHHHHHHHH--hccCccceEEech
Confidence 3446776332 344444443322 13344779999999999999999995 3333445555544
No 78
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=94.60 E-value=0.0061 Score=53.74 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=19.1
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.|-+.||.|+||||+|+.+.+.
T Consensus 4 ~Iil~G~~GsGKSTia~~LA~~ 25 (170)
T d1e6ca_ 4 PIFMVGARGCGMTTVGRELARA 25 (170)
T ss_dssp CEEEESCTTSSHHHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHH
Confidence 4568899999999999999873
No 79
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=94.56 E-value=0.0081 Score=55.18 Aligned_cols=24 Identities=21% Similarity=0.308 Sum_probs=21.4
Q ss_pred ceEEEEeccCCcchHHHHHHHhcc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
..+|.++|.+|+||||+|+++...
T Consensus 2 p~li~l~GlpgsGKSTla~~L~~~ 25 (213)
T d1bifa1 2 PTLIVMVGLPARGKTYISKKLTRY 25 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHH
Confidence 368999999999999999999873
No 80
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=94.48 E-value=0.0086 Score=57.46 Aligned_cols=23 Identities=30% Similarity=0.497 Sum_probs=20.6
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
++|+|+|=||+||||+|-.+.--
T Consensus 2 r~Iai~gKGGvGKTT~a~nLA~~ 24 (269)
T d1cp2a_ 2 RQVAIYGKGGIGKSTTTQNLTSG 24 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHH
T ss_pred CEEEEECCCcCCHHHHHHHHHHH
Confidence 78999999999999999887664
No 81
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=94.44 E-value=0.015 Score=54.49 Aligned_cols=47 Identities=15% Similarity=0.174 Sum_probs=32.7
Q ss_pred eeecchhHHHHHHHHHh-------cCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 144 KVYGREKEKEEIIELLL-------NDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 144 ~~vG~~~~~~~i~~~L~-------~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.+||....++.++.-+. .. .....+-|-++|..|+|||++|++|.+.
T Consensus 10 ~~i~~~~~i~~i~~~~~~~~~~~~~~---~~~p~~~vLL~GppGtGKT~la~alA~~ 63 (246)
T d1d2na_ 10 GIIKWGDPVTRVLDDGELLVQQTKNS---DRTPLVSVLLEGPPHSGKTALAAKIAEE 63 (246)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHC---SSCSEEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHHHHHHHHhcc---CCCCCeEEEEECcCCCCHHHHHHHHhhc
Confidence 37887665555544432 22 1124566889999999999999999883
No 82
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=94.39 E-value=0.042 Score=49.28 Aligned_cols=58 Identities=19% Similarity=0.143 Sum_probs=40.0
Q ss_pred CCceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeCCCCCHHHH--HHHHHHHccCC
Q 003013 168 DGFSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVSEDFDVFGV--SKFILNSIAKD 228 (857)
Q Consensus 168 ~~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs~~~~~~~i--~~~i~~~l~~~ 228 (857)
....||.++|..|+||||.+-.+... .+ .....+.+.-.+.|.+..+ .+..++.++..
T Consensus 7 ~~p~vi~lvGptGvGKTTTiAKLA~~--~~-~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~ 66 (211)
T d2qy9a2 7 KAPFVILMVGVNGVGKTTTIGKLARQ--FE-QQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIP 66 (211)
T ss_dssp CTTEEEEEECCTTSCHHHHHHHHHHH--HH-TTTCCEEEECCCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHH--HH-HCCCcEEEEecccccccchhhhhhhhhhcCCc
Confidence 46799999999999999987777653 22 2345677777788876543 34555555544
No 83
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=94.33 E-value=0.012 Score=51.89 Aligned_cols=24 Identities=33% Similarity=0.610 Sum_probs=21.4
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
+-++|.|.|+.|.||||+|+.+.+
T Consensus 3 ~g~iI~l~G~~GsGKSTia~~La~ 26 (176)
T d1zp6a1 3 GGNILLLSGHPGSGKSTIAEALAN 26 (176)
T ss_dssp TTEEEEEEECTTSCHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHH
Confidence 447999999999999999998866
No 84
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.32 E-value=0.0047 Score=53.93 Aligned_cols=58 Identities=19% Similarity=0.128 Sum_probs=32.7
Q ss_pred CCceEEEccCCCC--CCcchhhhCCCCCCcEEeEcCCCCCCcCCCCC--CCCCcceeeccccc
Q 003013 387 CRLRFLELSYCQG--LTKLPQALLTLCSLTDMKILGCASLVSFPEVA--LPSQLRTVRIQECN 445 (857)
Q Consensus 387 ~~L~~L~L~~~~~--l~~lp~~~~~l~~L~~L~l~~~~~l~~~~~~~--~l~~L~~L~l~~~~ 445 (857)
++|++|+|++|.. +..++..+..+++|++|++++| .++.++++. ...+|+.|++.+++
T Consensus 65 ~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N-~i~~l~~l~~l~~~~L~~L~L~~Np 126 (162)
T d1koha1 65 PELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGN-ELKSERELDKIKGLKLEELWLDGNS 126 (162)
T ss_dssp TTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTS-CCCCGGGHHHHTTCCCSSCCCTTST
T ss_pred CCCCEeeCCCccccCCchhHHHHhhCCcccccccccC-ccccchhhhhhhccccceeecCCCC
Confidence 3444444444422 1123444566777788888776 555555422 23467777777766
No 85
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=94.29 E-value=0.01 Score=52.56 Aligned_cols=23 Identities=22% Similarity=0.390 Sum_probs=21.1
Q ss_pred ceEEEEeccCCcchHHHHHHHhc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.++|.|.|..|.||||+|+.+.+
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~ 25 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQS 25 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHH
Confidence 36999999999999999999877
No 86
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.28 E-value=0.011 Score=51.87 Aligned_cols=25 Identities=28% Similarity=0.328 Sum_probs=22.1
Q ss_pred CCceEEEEeccCCcchHHHHHHHhc
Q 003013 168 DGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 168 ~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.+..+|-++|+.|.||||+|+.+..
T Consensus 12 ~~p~liil~G~pGsGKST~a~~l~~ 36 (172)
T d1yj5a2 12 PNPEVVVAVGFPGAGKSTFIQEHLV 36 (172)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHHTG
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHH
Confidence 3668999999999999999998865
No 87
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=94.22 E-value=0.027 Score=54.85 Aligned_cols=48 Identities=23% Similarity=0.313 Sum_probs=37.7
Q ss_pred eecchhHHHHHHHHHhc---CCCCCCCCceEEEEeccCCcchHHHHHHHhc
Q 003013 145 VYGREKEKEEIIELLLN---DDLRADDGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 145 ~vG~~~~~~~i~~~L~~---~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
++|.++.++.|...+.. +-.+.+....++-.+|..|+|||.||+.+..
T Consensus 24 viGQ~~a~~~v~~~v~~~~~~l~~~~~p~~~~lf~Gp~GvGKT~lak~la~ 74 (315)
T d1r6bx3 24 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSK 74 (315)
T ss_dssp SCSCHHHHHHHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHHHHHHHH
T ss_pred ecChHHHHHHHHHHHHHHHccCCCCCCCceEEEEECCCcchhHHHHHHHHh
Confidence 89999999999877742 1111344567899999999999999999877
No 88
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=94.11 E-value=0.01 Score=52.61 Aligned_cols=22 Identities=45% Similarity=0.619 Sum_probs=19.9
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|+|.|..|+|||||++.|...
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~ 23 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVER 23 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCcHHHHHHHHHHhc
Confidence 3899999999999999999874
No 89
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.05 E-value=0.013 Score=53.81 Aligned_cols=24 Identities=17% Similarity=0.256 Sum_probs=21.6
Q ss_pred ceEEEEeccCCcchHHHHHHHhcc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.-||||-|..|.||||+|+.+...
T Consensus 2 P~iIgI~G~~gSGKSTla~~L~~~ 25 (213)
T d1uj2a_ 2 PFLIGVSGGTASGKSSVCAKIVQL 25 (213)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHH
Confidence 468999999999999999998774
No 90
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=93.89 E-value=0.016 Score=52.12 Aligned_cols=23 Identities=39% Similarity=0.523 Sum_probs=20.3
Q ss_pred CceEEEEeccCCcchHHHHHHHh
Q 003013 169 GFSVISINGMAGVGKTTLAQLVY 191 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~ 191 (857)
..-+|||.|+.|.||||+|+.+-
T Consensus 2 ~p~IIgitG~~gSGKstva~~l~ 24 (191)
T d1uf9a_ 2 HPIIIGITGNIGSGKSTVAALLR 24 (191)
T ss_dssp CCEEEEEEECTTSCHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHH
Confidence 35799999999999999999773
No 91
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=93.89 E-value=0.014 Score=52.45 Aligned_cols=22 Identities=32% Similarity=0.519 Sum_probs=20.5
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
++|-|.|+.|+||||+|+.+..
T Consensus 2 kiivi~G~~GsGKTT~~~~La~ 23 (194)
T d1nksa_ 2 KIGIVTGIPGVGKSTVLAKVKE 23 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHH
Confidence 6889999999999999999976
No 92
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.89 E-value=0.011 Score=56.35 Aligned_cols=52 Identities=27% Similarity=0.300 Sum_probs=36.2
Q ss_pred cCCeeecchhHHHHHHHHHhc---C-----CCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 141 NEAKVYGREKEKEEIIELLLN---D-----DLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 141 ~~~~~vG~~~~~~~i~~~L~~---~-----~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
..++++|.++.+++|.+.+.. . .. +-...+.|-++|..|.|||+||+++.+.
T Consensus 5 ~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~-g~~~~~giLL~Gp~GtGKT~l~~ala~~ 64 (265)
T d1r7ra3 5 TWEDIGGLEDVKRELQELVQYPVEHPDKFLKF-GMTPSKGVLFYGPPGCGKTLLAKAIANE 64 (265)
T ss_dssp SCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHC-CCCCCCEEEEBCCTTSSHHHHHHHHHHH
T ss_pred CHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhC-CCCCCCeEEEECCCCCcchhHHHHHHHH
Confidence 346688998777666665421 1 00 1123456789999999999999999884
No 93
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=93.75 E-value=0.019 Score=55.14 Aligned_cols=26 Identities=35% Similarity=0.394 Sum_probs=23.3
Q ss_pred CCCceEEEEeccCCcchHHHHHHHhc
Q 003013 167 DDGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 167 ~~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.....+|||.|..|+||||+|+.+..
T Consensus 77 ~k~P~iIGIaG~sgSGKSTla~~L~~ 102 (308)
T d1sq5a_ 77 QRIPYIISIAGSVAVGKSTTARVLQA 102 (308)
T ss_dssp CCCCEEEEEEECTTSSHHHHHHHHHH
T ss_pred CCCCEEEEEeCCCCCCCcHHHHHHHH
Confidence 34678999999999999999999876
No 94
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=93.74 E-value=0.052 Score=52.79 Aligned_cols=63 Identities=14% Similarity=0.072 Sum_probs=34.2
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEe--CCCCCHHHHHHH
Q 003013 152 KEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCV--SEDFDVFGVSKF 220 (857)
Q Consensus 152 ~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~v--s~~~~~~~i~~~ 220 (857)
..+++..+.... .+..+|||.|.+|+|||||...+... ....-..++-+.| +..++-..+..+
T Consensus 40 ~~~ll~~~~~~~----~~~~~IgitG~pGaGKSTLi~~l~~~--~~~~g~~vavlavDpss~~~ggailgd 104 (327)
T d2p67a1 40 STQLLDAIMPYC----GNTLRLGVTGTPGAGKSTFLEAFGML--LIREGLKVAVIAVDPSSPVTGGSILGD 104 (327)
T ss_dssp HHHHHHHHGGGC----SCSEEEEEEECTTSCHHHHHHHHHHH--HHHTTCCEEEEEECCC-----------
T ss_pred HHHHHHHhhhcc----CCceEEEeeCCCCCCHHHHHHHHHHH--HHhcCCceeeecCCCceeeeccccccc
Confidence 345555565433 37899999999999999999988763 2222234444444 333443334433
No 95
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=93.53 E-value=0.015 Score=57.65 Aligned_cols=46 Identities=20% Similarity=0.289 Sum_probs=34.5
Q ss_pred cCCeeecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhc
Q 003013 141 NEAKVYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 141 ~~~~~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
+..+|+|.+..+..++-..... +.+-|-|.|..|+||||||+.+-.
T Consensus 5 ~f~~I~Gq~~~kral~laa~~~------~~h~vLl~G~pG~GKT~lar~~~~ 50 (333)
T d1g8pa_ 5 PFSAIVGQEDMKLALLLTAVDP------GIGGVLVFGDRGTGKSTAVRALAA 50 (333)
T ss_dssp CGGGSCSCHHHHHHHHHHHHCG------GGCCEEEECCGGGCTTHHHHHHHH
T ss_pred ChhhccCcHHHHHHHHHHHhcc------CCCeEEEECCCCccHHHHHHHHHH
Confidence 4567999998888766555422 224578999999999999998753
No 96
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=93.53 E-value=0.033 Score=54.20 Aligned_cols=39 Identities=23% Similarity=0.353 Sum_probs=29.8
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 151 EKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 151 ~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
...++++.+.... .+..+|||.|.+|+|||||..++...
T Consensus 36 ~~~~~~~~~~~~~----~~~~~igitG~pGaGKSTli~~l~~~ 74 (323)
T d2qm8a1 36 AVRDLIDAVLPQT----GRAIRVGITGVPGVGKSTTIDALGSL 74 (323)
T ss_dssp HHHHHHHHHGGGC----CCSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcc----CCceEEeeeCCCCCCHHHHHHHHHHH
Confidence 3455566665433 37899999999999999999988763
No 97
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=93.45 E-value=0.019 Score=51.48 Aligned_cols=23 Identities=30% Similarity=0.447 Sum_probs=20.1
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
++++| |.|++|.||||+|+.+..
T Consensus 3 ~~rii-l~G~pGSGKsT~a~~La~ 25 (190)
T d1ak2a1 3 GVRAV-LLGPPGAGKGTQAPKLAK 25 (190)
T ss_dssp CCEEE-EECCTTSSHHHHHHHHHH
T ss_pred ccEEE-EECCCCCCHHHHHHHHHH
Confidence 56777 889999999999998876
No 98
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=93.43 E-value=0.017 Score=53.49 Aligned_cols=43 Identities=23% Similarity=0.346 Sum_probs=31.1
Q ss_pred ceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeCCCCCHHHHHHHHHHHc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVSEDFDVFGVSKFILNSI 225 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs~~~~~~~i~~~i~~~l 225 (857)
..||+|-|+.|.||||+|+.+.++ |.... .+.-.+.|+++...
T Consensus 3 ~piI~I~GppGSGKgT~ak~La~~------~gl~~-------iStGdLlR~~a~~~ 45 (225)
T d1ckea_ 3 APVITIDGPSGAGKGTLCKAMAEA------LQWHL-------LDSGAIYRVLALAA 45 (225)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHH------HTCEE-------EEHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHH------hCCcE-------ECHHHHHHHHHHHH
Confidence 359999999999999999998774 22111 25567777776543
No 99
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=93.42 E-value=0.018 Score=51.96 Aligned_cols=26 Identities=27% Similarity=0.235 Sum_probs=22.4
Q ss_pred CCCceEEEEeccCCcchHHHHHHHhc
Q 003013 167 DDGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 167 ~~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
+.+..+|+|-|.-|+||||+|+.+.+
T Consensus 6 ~~kp~~I~ieG~~GsGKTTl~~~L~~ 31 (197)
T d2vp4a1 6 GTQPFTVLIEGNIGSGKTTYLNHFEK 31 (197)
T ss_dssp TCCCEEEEEECSTTSCHHHHHHTTGG
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHH
Confidence 34667999999999999999998765
No 100
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=93.24 E-value=0.02 Score=55.43 Aligned_cols=24 Identities=29% Similarity=0.429 Sum_probs=20.4
Q ss_pred ceEEEEeccCCcchHHHHHHHhcc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.++|+|+|=|||||||+|-.+.-.
T Consensus 2 Mr~IaisgKGGVGKTT~a~NLA~~ 25 (289)
T d2afhe1 2 MRQCAIYGKGGIGKSTTTQNLVAA 25 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHHHHHHH
Confidence 478999999999999998877553
No 101
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=93.02 E-value=0.027 Score=50.60 Aligned_cols=28 Identities=25% Similarity=0.534 Sum_probs=24.2
Q ss_pred CCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 166 ADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 166 ~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.++++..|+|+|..|+|||||...+.+.
T Consensus 19 p~~~~~~I~lvG~~n~GKSTLin~L~g~ 46 (195)
T d1svia_ 19 PEGGLPEIALAGRSNVGKSSFINSLINR 46 (195)
T ss_dssp CCSCCCEEEEEEBTTSSHHHHHHHHHTC
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHhcCC
Confidence 3457788999999999999999999863
No 102
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.87 E-value=0.025 Score=50.79 Aligned_cols=23 Identities=26% Similarity=0.333 Sum_probs=20.9
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.+|.|.|++|.||||.|+.+.+.
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~~ 24 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVEK 24 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHH
Confidence 58999999999999999999873
No 103
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.87 E-value=0.026 Score=49.93 Aligned_cols=23 Identities=26% Similarity=0.391 Sum_probs=19.3
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.+++| |.|+.|.||||+|+.+.+
T Consensus 2 ~mrIv-l~G~pGSGKtT~a~~La~ 24 (180)
T d1akya1 2 SIRMV-LIGPPGAGKGTQAPNLQE 24 (180)
T ss_dssp CCEEE-EECCTTSSHHHHHHHHHH
T ss_pred ceEEE-EECCCCCCHHHHHHHHHH
Confidence 44555 779999999999999876
No 104
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=92.55 E-value=0.023 Score=51.00 Aligned_cols=23 Identities=35% Similarity=0.557 Sum_probs=21.2
Q ss_pred ceEEEEeccCCcchHHHHHHHhc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
-.++||+|..|.|||||.+.+..
T Consensus 27 Gei~~l~G~NGsGKSTLl~~i~g 49 (200)
T d1sgwa_ 27 GNVVNFHGPNGIGKTTLLKTIST 49 (200)
T ss_dssp TCCEEEECCTTSSHHHHHHHHTT
T ss_pred CCEEEEECCCCChHHHHHHHHhc
Confidence 46899999999999999999977
No 105
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=92.52 E-value=0.024 Score=50.68 Aligned_cols=23 Identities=26% Similarity=0.382 Sum_probs=19.9
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-.|.|.|+.|.||||+|+.+.+.
T Consensus 4 m~I~i~GppGsGKsT~a~~La~~ 26 (189)
T d1zaka1 4 LKVMISGAPASGKGTQCELIKTK 26 (189)
T ss_dssp CCEEEEESTTSSHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHH
Confidence 45779999999999999998763
No 106
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=92.38 E-value=0.056 Score=48.46 Aligned_cols=56 Identities=13% Similarity=0.053 Sum_probs=33.8
Q ss_pred CceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeCCCCCHHHH--HHHHHHHccC
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVSEDFDVFGV--SKFILNSIAK 227 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs~~~~~~~i--~~~i~~~l~~ 227 (857)
+.+||.++|..|+||||.+..+....+ +.-..+..++ .+.|.+..+ .+..++.++.
T Consensus 9 ~~~vi~lvGp~GvGKTTTiaKLA~~~~--~~g~kV~lit-~Dt~R~gA~eQL~~~a~~l~v 66 (207)
T d1ls1a2 9 DRNLWFLVGLQGSGKTTTAAKLALYYK--GKGRRPLLVA-ADTQRPAAREQLRLLGEKVGV 66 (207)
T ss_dssp SSEEEEEECCTTTTHHHHHHHHHHHHH--HTTCCEEEEE-CCSSCHHHHHHHHHHHHHHTC
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHH--HCCCcEEEEe-cccccchHHHHHHHHHHhcCC
Confidence 568999999999999988777765332 2222344333 355544433 3345555444
No 107
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=92.34 E-value=0.029 Score=50.09 Aligned_cols=24 Identities=25% Similarity=0.347 Sum_probs=19.9
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
..-.|.|.|+.|.||||+|+.+..
T Consensus 5 r~mrIiliG~PGSGKtT~a~~La~ 28 (189)
T d2ak3a1 5 RLLRAAIMGAPGSGKGTVSSRITK 28 (189)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHH
T ss_pred cceeEEEECCCCCCHHHHHHHHHH
Confidence 344566889999999999998876
No 108
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=92.32 E-value=0.037 Score=50.07 Aligned_cols=24 Identities=29% Similarity=0.306 Sum_probs=22.1
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
+-.||=+.|+.|.||||+|+++..
T Consensus 23 kg~vIwltGlsGsGKTTia~~L~~ 46 (208)
T d1m7ga_ 23 RGLTIWLTGLSASGKSTLAVELEH 46 (208)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHH
Confidence 568999999999999999999976
No 109
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=92.21 E-value=0.048 Score=52.94 Aligned_cols=48 Identities=21% Similarity=0.289 Sum_probs=36.6
Q ss_pred eecchhHHHHHHHHHhcC---CCCCCCCceEEEEeccCCcchHHHHHHHhc
Q 003013 145 VYGREKEKEEIIELLLND---DLRADDGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 145 ~vG~~~~~~~i~~~L~~~---~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
++|.++.++.|...+... -.+.+....++-.+|..|+|||.+|+.+.+
T Consensus 25 v~GQ~~ai~~v~~~i~~~~~~l~~~~kp~~~~lf~Gp~G~GKt~lak~la~ 75 (315)
T d1qvra3 25 VVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAA 75 (315)
T ss_dssp SCSCHHHHHHHHHHHHHHGGGCSCSSSCSEEEEEBSCSSSSHHHHHHHHHH
T ss_pred EeCHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEECCCcchHHHHHHHHHH
Confidence 789999999887766431 111233456889999999999999998876
No 110
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=92.19 E-value=0.032 Score=51.43 Aligned_cols=45 Identities=24% Similarity=0.358 Sum_probs=31.8
Q ss_pred eEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeCCCCCHHHHHHHHHHHccCC
Q 003013 171 SVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVSEDFDVFGVSKFILNSIAKD 228 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs~~~~~~~i~~~i~~~l~~~ 228 (857)
-+|+|-|.+|+||||+|+.+..+ |... + .+--.+.+.++......
T Consensus 4 i~IaIdGp~GsGKgT~ak~La~~------lg~~---~----istGdl~R~~a~~~~~~ 48 (223)
T d1q3ta_ 4 IQIAIDGPASSGKSTVAKIIAKD------FGFT---Y----LDTGAMYRAATYMALKN 48 (223)
T ss_dssp CEEEEECSSCSSHHHHHHHHHHH------HCCE---E----EEHHHHHHHHHHHHHHT
T ss_pred eEEEEECCCCCCHHHHHHHHHHH------hCCc---E----ECHHHHHHHHHHHHHHc
Confidence 46899999999999999988774 3221 1 25567777776654443
No 111
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=92.10 E-value=0.031 Score=49.53 Aligned_cols=20 Identities=30% Similarity=0.536 Sum_probs=18.3
Q ss_pred EEEeccCCcchHHHHHHHhc
Q 003013 173 ISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 173 i~I~GmgGvGKTTLa~~v~~ 192 (857)
|-|.|+.|.||||+|+.+..
T Consensus 3 I~i~G~pGSGKsT~a~~La~ 22 (182)
T d1zina1 3 LVLMGLPGAGKGTQAEKIVA 22 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 67999999999999998866
No 112
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.00 E-value=0.047 Score=51.57 Aligned_cols=27 Identities=26% Similarity=0.348 Sum_probs=23.4
Q ss_pred CCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 167 DDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 167 ~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+...-+|||-|.-|.||||||..+...
T Consensus 24 ~~~P~iIGi~G~qGSGKSTl~~~l~~~ 50 (286)
T d1odfa_ 24 NKCPLFIFFSGPQGSGKSFTSIQIYNH 50 (286)
T ss_dssp CCSCEEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCCCEEEEeECCCCCCHHHHHHHHHHH
Confidence 346789999999999999999988773
No 113
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=91.93 E-value=0.05 Score=52.14 Aligned_cols=36 Identities=25% Similarity=0.409 Sum_probs=27.0
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 152 KEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 152 ~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
...|++.+-. .+-+||.+.|=|||||||+|-.+...
T Consensus 8 ~~~~~~~~~~------~~~~iii~sGKGGVGKTT~a~nLA~~ 43 (279)
T d1ihua2 8 LSALVDDIAR------NEHGLIMLMGKGGVGKTTMAAAIAVR 43 (279)
T ss_dssp HHHHHHHHHT------TSCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred HHHHHHHhhc------CCCEEEEEECCCCCCHHHHHHHHHHH
Confidence 3455666633 36799999999999999987777553
No 114
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=91.83 E-value=0.035 Score=49.15 Aligned_cols=22 Identities=27% Similarity=0.296 Sum_probs=19.2
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|-|.|+.|.||||+|+.+.+.
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~ 23 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEK 23 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 3678899999999999998774
No 115
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.73 E-value=0.034 Score=49.60 Aligned_cols=21 Identities=29% Similarity=0.700 Sum_probs=18.8
Q ss_pred EEEeccCCcchHHHHHHHhcc
Q 003013 173 ISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 173 i~I~GmgGvGKTTLa~~v~~~ 193 (857)
|.|+|+.|+|||||++++...
T Consensus 3 Ivl~GPsGsGK~tl~~~L~~~ 23 (190)
T d1lvga_ 3 VVLSGPSGAGKSTLLKKLFQE 23 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHh
Confidence 669999999999999988773
No 116
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=91.72 E-value=0.042 Score=50.91 Aligned_cols=37 Identities=19% Similarity=0.114 Sum_probs=27.2
Q ss_pred ceEEEEe-ccCCcchHHHHHHHhcccchhccCCceEEEEe
Q 003013 170 FSVISIN-GMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCV 208 (857)
Q Consensus 170 ~~vi~I~-GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~v 208 (857)
.+||+|+ |=||+||||+|..+..... +.=..++.+..
T Consensus 1 ~kvIav~s~KGGvGKTtia~nlA~~la--~~g~~VlliD~ 38 (232)
T d1hyqa_ 1 VRTITVASGKGGTGKTTITANLGVALA--QLGHDVTIVDA 38 (232)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHH--HTTCCEEEEEC
T ss_pred CEEEEEECCCCCChHHHHHHHHHHHHH--hCCCCEEEEeC
Confidence 4799999 8899999999999877432 33234666654
No 117
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=91.55 E-value=0.044 Score=49.13 Aligned_cols=24 Identities=25% Similarity=0.318 Sum_probs=21.8
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
+.++|-|.|++|.||||+|+.+.+
T Consensus 7 ~~~iI~l~G~pGSGKsT~a~~La~ 30 (194)
T d3adka_ 7 KSKIIFVVGGPGSGKGTQCEKIVQ 30 (194)
T ss_dssp TSCEEEEEECTTSSHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHH
Confidence 558999999999999999998866
No 118
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=91.54 E-value=0.048 Score=49.67 Aligned_cols=24 Identities=29% Similarity=0.397 Sum_probs=21.5
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.-.++||+|..|.|||||++.+..
T Consensus 30 ~Ge~~~iiG~sGsGKSTLl~~i~g 53 (230)
T d1l2ta_ 30 EGEFVSIMGPSGSGKSTMLNIIGC 53 (230)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCcchhhHhccC
Confidence 346999999999999999999877
No 119
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=91.53 E-value=0.043 Score=48.60 Aligned_cols=22 Identities=32% Similarity=0.484 Sum_probs=19.4
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.|-|.|+.|.||||+|+.+.+.
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~ 23 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEK 23 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 3679999999999999998874
No 120
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=91.47 E-value=0.09 Score=47.12 Aligned_cols=59 Identities=17% Similarity=0.136 Sum_probs=30.6
Q ss_pred CCCceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeCCCCCHHHH--HHHHHHHccCC
Q 003013 167 DDGFSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVSEDFDVFGV--SKFILNSIAKD 228 (857)
Q Consensus 167 ~~~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs~~~~~~~i--~~~i~~~l~~~ 228 (857)
+....||.++|..|+||||.+-.+....+ ++.. .+..++. +.+-+..+ .+..++.++..
T Consensus 9 ~k~p~vi~lvGptGvGKTTTiAKLA~~~~-~~g~-kV~lit~-Dt~R~ga~eQL~~~a~~l~v~ 69 (211)
T d1j8yf2 9 DKIPYVIMLVGVQGTGKATTAGKLAYFYK-KKGF-KVGLVGA-DVYRPAALEQLQQLGQQIGVP 69 (211)
T ss_dssp SSSSEEEEEECSCCC----HHHHHHHHHH-HTTC-CEEEEEC-CCSSHHHHHHHHHHHHHHTCC
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHH-HCCC-ceEEEEe-eccccchhHHHHHhccccCcc
Confidence 34679999999999999998666654332 2222 3444443 44443333 33444444443
No 121
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=91.46 E-value=0.085 Score=46.19 Aligned_cols=35 Identities=23% Similarity=0.194 Sum_probs=25.9
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 152 KEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 152 ~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
..++++++. . +-..|.|+|-+|+|||||+.++-++
T Consensus 4 ~~~~~~~~~------~-k~~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 4 FTRIWRLFN------H-QEHKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp HHHHHHHHT------T-SCEEEEEEESTTSSHHHHHHHHHTT
T ss_pred HHHHHHHhC------C-CeEEEEEECCCCCCHHHHHHHHhcC
Confidence 346776662 2 3355779999999999999987664
No 122
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=91.42 E-value=0.046 Score=50.16 Aligned_cols=23 Identities=26% Similarity=0.369 Sum_probs=21.1
Q ss_pred ceEEEEeccCCcchHHHHHHHhc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
-.++||+|..|.|||||++.++.
T Consensus 29 Ge~~~liG~sGaGKSTll~~i~g 51 (240)
T d1g2912 29 GEFMILLGPSGCGKTTTLRMIAG 51 (240)
T ss_dssp TCEEEEECSTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCChHHHHHHHHhc
Confidence 36999999999999999999966
No 123
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=91.39 E-value=0.072 Score=52.60 Aligned_cols=45 Identities=16% Similarity=0.084 Sum_probs=31.7
Q ss_pred eecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 145 VYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 145 ~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+.|.++..-++.+.+..+.+ +-+.+-+||++|+||||+|+.+.+.
T Consensus 133 ~~~~~~~i~~~l~~~~~~~~----~~~~~~~~g~~~~gk~~~~~~~~~~ 177 (362)
T d1svma_ 133 LPKMDSVVYDFLKCMVYNIP----KKRYWLFKGPIDSGKTTLAAALLEL 177 (362)
T ss_dssp STTHHHHHHHHHHHHHHCCT----TCCEEEEECSTTSSHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHhCCC----CcCeEEEECCCCCCHHHHHHHHHHH
Confidence 44555444444444444332 5678999999999999999999883
No 124
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.31 E-value=0.042 Score=48.83 Aligned_cols=22 Identities=36% Similarity=0.656 Sum_probs=19.5
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|..|+|||||++.+.++
T Consensus 3 pIvl~GpsG~GK~tl~~~L~~~ 24 (186)
T d1gkya_ 3 PIVISGPSGTGKSTLLKKLFAE 24 (186)
T ss_dssp CEEEECCTTSSHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHh
Confidence 3779999999999999998773
No 125
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=91.31 E-value=0.052 Score=49.78 Aligned_cols=25 Identities=28% Similarity=0.325 Sum_probs=22.1
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.-.++||.|..|.|||||++.++--
T Consensus 30 ~Ge~~~iiG~sGsGKSTLl~~i~Gl 54 (240)
T d3dhwc1 30 AGQIYGVIGASGAGKSTLIRCVNLL 54 (240)
T ss_dssp SSCEEEEEESTTSSHHHHHHHHTTS
T ss_pred CCCEEEEECCCCCCHHHHHHHHcCC
Confidence 3479999999999999999999773
No 126
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=91.26 E-value=0.046 Score=48.35 Aligned_cols=23 Identities=26% Similarity=0.501 Sum_probs=20.5
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
++|.|+|..|+|||||++.+.++
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~ 25 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRER 25 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHhh
Confidence 57889999999999999998763
No 127
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=91.26 E-value=0.046 Score=51.11 Aligned_cols=22 Identities=36% Similarity=0.413 Sum_probs=19.9
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
||+|.|+.|.|||||..++-..
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~~ 23 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGRY 23 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEEcCCCCcHHHHHHHHHHH
Confidence 8999999999999999998653
No 128
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=91.22 E-value=0.064 Score=48.01 Aligned_cols=58 Identities=14% Similarity=-0.083 Sum_probs=35.4
Q ss_pred CceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeC-CCCCHHHHHHHHHHHccCC
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVS-EDFDVFGVSKFILNSIAKD 228 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs-~~~~~~~i~~~i~~~l~~~ 228 (857)
+.+||.++|..|+||||.+-.+....+.+ . ..+..++.- ....-.+-.+..++.++..
T Consensus 5 ~~~vi~lvGptGvGKTTTiaKLA~~~~~~-g-~kV~lit~Dt~R~gA~eQL~~~a~~l~i~ 63 (207)
T d1okkd2 5 KGRVVLVVGVNGVGKTTTIAKLGRYYQNL-G-KKVMFCAGDTFRAAGGTQLSEWGKRLSIP 63 (207)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHHHHHHTT-T-CCEEEECCCCSSTTHHHHHHHHHHHHTCC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHC-C-CcEEEEEeccccccchhhHhhcccccCce
Confidence 56899999999999999877776533222 1 234444431 2234444455566665544
No 129
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.21 E-value=0.052 Score=50.62 Aligned_cols=25 Identities=36% Similarity=0.535 Sum_probs=22.1
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+.+.|.|-|+-|+||||+++.+.+.
T Consensus 1 ~pk~IviEG~~GsGKST~~~~L~~~ 25 (241)
T d2ocpa1 1 GPRRLSIEGNIAVGKSTFVKLLTKT 25 (241)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCcHHHHHHHHHHH
Confidence 3579999999999999999998764
No 130
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=91.20 E-value=0.056 Score=49.46 Aligned_cols=24 Identities=25% Similarity=0.371 Sum_probs=21.5
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.-.++||+|..|.|||||++.+..
T Consensus 31 ~Ge~~~liGpsGaGKSTLl~~i~G 54 (239)
T d1v43a3 31 DGEFLVLLGPSGCGKTTTLRMIAG 54 (239)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHT
T ss_pred CCCEEEEECCCCChHHHHHHHHHc
Confidence 346999999999999999999866
No 131
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=91.10 E-value=0.055 Score=50.45 Aligned_cols=24 Identities=38% Similarity=0.441 Sum_probs=21.7
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.-.++||+|..|.|||||++.+..
T Consensus 27 ~GEi~~iiG~sGsGKSTLl~~i~G 50 (258)
T d1b0ua_ 27 AGDVISIIGSSGSGKSTFLRCINF 50 (258)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTT
T ss_pred CCCEEEEECCCCCcHHHHHHHHHc
Confidence 346999999999999999999976
No 132
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=91.09 E-value=0.058 Score=49.13 Aligned_cols=24 Identities=25% Similarity=0.408 Sum_probs=21.4
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
+-.++||+|..|.|||||++.+.-
T Consensus 25 ~Gei~~liGpsGsGKSTLl~~i~G 48 (232)
T d2awna2 25 EGEFVVFVGPSGCGKSTLLRMIAG 48 (232)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHHT
T ss_pred CCCEEEEECCCCChHHHHHHHHhc
Confidence 346999999999999999999966
No 133
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=91.08 E-value=0.049 Score=50.73 Aligned_cols=24 Identities=29% Similarity=0.508 Sum_probs=21.3
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.-.+|||+|..|.|||||++.+..
T Consensus 40 ~Ge~iaivG~sGsGKSTLl~ll~g 63 (253)
T d3b60a1 40 AGKTVALVGRSGSGKSTIASLITR 63 (253)
T ss_dssp TTCEEEEEECTTSSHHHHHHHHTT
T ss_pred CCCEEEEECCCCChHHHHHHHHhc
Confidence 346899999999999999999965
No 134
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.03 E-value=0.058 Score=46.71 Aligned_cols=23 Identities=30% Similarity=0.268 Sum_probs=19.9
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.-|.++|.+|+|||||+..+.++
T Consensus 3 ~Kv~liG~~~vGKTsLl~~~~~~ 25 (165)
T d1z06a1 3 FKIIVIGDSNVGKTCLTYRFCAG 25 (165)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 45789999999999999988664
No 135
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=90.93 E-value=0.053 Score=50.00 Aligned_cols=23 Identities=43% Similarity=0.606 Sum_probs=21.1
Q ss_pred ceEEEEeccCCcchHHHHHHHhc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
-..|||+|..|.|||||++.+..
T Consensus 29 Ge~vaIvG~sGsGKSTLl~ll~g 51 (241)
T d2pmka1 29 GEVIGIVGRSGSGKSTLTKLIQR 51 (241)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTT
T ss_pred CCEEEEECCCCCCHHHHHHHHHh
Confidence 36899999999999999999977
No 136
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=90.85 E-value=0.052 Score=47.10 Aligned_cols=22 Identities=36% Similarity=0.413 Sum_probs=19.4
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|..|+|||||.+.+.++
T Consensus 7 kI~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 7 RILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4789999999999999988764
No 137
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=90.85 E-value=0.058 Score=48.86 Aligned_cols=20 Identities=30% Similarity=0.571 Sum_probs=18.3
Q ss_pred eEEEEeccCCcchHHHHHHH
Q 003013 171 SVISINGMAGVGKTTLAQLV 190 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v 190 (857)
.+|||.|+-|.||||.|+.+
T Consensus 4 ~iIgitG~igSGKStv~~~l 23 (208)
T d1vhta_ 4 YIVALTGGIGSGKSTVANAF 23 (208)
T ss_dssp EEEEEECCTTSCHHHHHHHH
T ss_pred EEEEEECCCcCCHHHHHHHH
Confidence 49999999999999999865
No 138
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=90.79 E-value=0.048 Score=46.86 Aligned_cols=21 Identities=29% Similarity=0.339 Sum_probs=18.6
Q ss_pred EEEeccCCcchHHHHHHHhcc
Q 003013 173 ISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 173 i~I~GmgGvGKTTLa~~v~~~ 193 (857)
|.|+|..|+|||||.+.+..+
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~ 23 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLG 23 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 569999999999999998654
No 139
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.77 E-value=0.045 Score=48.11 Aligned_cols=22 Identities=18% Similarity=0.440 Sum_probs=20.0
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
+.|-|+|+.|+|||||++.+..
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~ 25 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLIT 25 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHH
T ss_pred CcEEEECCCCCCHHHHHHHHHH
Confidence 5789999999999999998876
No 140
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=90.76 E-value=0.12 Score=46.31 Aligned_cols=57 Identities=18% Similarity=0.096 Sum_probs=34.9
Q ss_pred CCceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeCCCCCHH--HHHHHHHHHccC
Q 003013 168 DGFSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVSEDFDVF--GVSKFILNSIAK 227 (857)
Q Consensus 168 ~~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs~~~~~~--~i~~~i~~~l~~ 227 (857)
....||.++|..|+||||.+-.+...... +. ..+..++. +.|-+. +-.+..++.++.
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~~~-~~-~kV~lit~-Dt~R~gA~eQL~~~a~~l~i 67 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMFVD-EG-KSVVLAAA-DTFRAAAIEQLKIWGERVGA 67 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHHHH-TT-CCEEEEEE-CTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHH-CC-CceEEEee-cccccchhHHHHHHhhhcCc
Confidence 46789999999999999987766654322 22 34555554 334333 334455555554
No 141
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.75 E-value=0.062 Score=50.91 Aligned_cols=25 Identities=32% Similarity=0.549 Sum_probs=22.1
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.-.+|||+|..|.|||||++.+..-
T Consensus 61 ~Ge~vaivG~nGsGKSTLl~~i~Gl 85 (281)
T d1r0wa_ 61 KGEMLAITGSTGSGKTSLLMLILGE 85 (281)
T ss_dssp TTCEEEEEESTTSSHHHHHHHHHTS
T ss_pred CCCEEEEECCCCChHHHHHHHHhCC
Confidence 4478999999999999999999764
No 142
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.75 E-value=0.041 Score=51.34 Aligned_cols=24 Identities=29% Similarity=0.425 Sum_probs=21.3
Q ss_pred ceEEEEeccCCcchHHHHHHHhcc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.+.|+|-|+-|+||||+|+.+.+.
T Consensus 2 ~k~I~ieG~dGsGKST~~~~L~~~ 25 (241)
T d1p5zb_ 2 IKKISIEGNIAAGKSTFVNILKQL 25 (241)
T ss_dssp CEEEEEECSTTSSHHHHHTTTGGG
T ss_pred CCEEEEECCCCCCHHHHHHHHHHH
Confidence 578999999999999999987663
No 143
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=90.72 E-value=0.069 Score=49.30 Aligned_cols=24 Identities=33% Similarity=0.458 Sum_probs=21.5
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.-.++||+|..|.|||||++.+..
T Consensus 27 ~Ge~vaivG~sGsGKSTLl~ll~g 50 (242)
T d1mv5a_ 27 PNSIIAFAGPSGGGKSTIFSLLER 50 (242)
T ss_dssp TTEEEEEECCTTSSHHHHHHHHTT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHH
Confidence 347999999999999999999965
No 144
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=90.72 E-value=0.079 Score=46.39 Aligned_cols=23 Identities=30% Similarity=0.421 Sum_probs=19.9
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
--|.|+|.+|+|||||...+.++
T Consensus 17 ~kI~vvG~~~vGKSsLi~~l~~~ 39 (176)
T d1fzqa_ 17 VRILLLGLDNAGKTTLLKQLASE 39 (176)
T ss_dssp EEEEEEESTTSSHHHHHHHHCCS
T ss_pred EEEEEECCCCCCHHHHHHHHhcC
Confidence 45789999999999999988664
No 145
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.59 E-value=0.066 Score=49.77 Aligned_cols=24 Identities=38% Similarity=0.461 Sum_probs=21.7
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.-.+++|+|..|.|||||++.+..
T Consensus 39 ~Ge~vaivG~sGsGKSTLl~li~g 62 (251)
T d1jj7a_ 39 PGEVTALVGPNGSGKSTVAALLQN 62 (251)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTT
T ss_pred CCCEEEEECCCCCcHHHHHHHHhc
Confidence 447999999999999999999976
No 146
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=90.53 E-value=0.062 Score=49.85 Aligned_cols=36 Identities=25% Similarity=0.106 Sum_probs=25.4
Q ss_pred eEEEEe-ccCCcchHHHHHHHhcccchhccCCceEEEEe
Q 003013 171 SVISIN-GMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCV 208 (857)
Q Consensus 171 ~vi~I~-GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~v 208 (857)
+||+|+ +-||+||||+|..+..... +.-..++-+..
T Consensus 3 ~vIav~~~kGGvGKTtia~nLA~~la--~~g~~VlliD~ 39 (237)
T d1g3qa_ 3 RIISIVSGKGGTGKTTVTANLSVALG--DRGRKVLAVDG 39 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHH--HTTCCEEEEEC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHH--hCCCCEEEEeC
Confidence 699999 6799999999999876422 22234555543
No 147
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.50 E-value=0.16 Score=45.76 Aligned_cols=23 Identities=22% Similarity=0.445 Sum_probs=21.0
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
..|.|-|+-|+||||+|+.+.+.
T Consensus 4 ~lI~ieG~dGsGKsT~~~~L~~~ 26 (209)
T d1nn5a_ 4 ALIVLEGVDRAGKSTQSRKLVEA 26 (209)
T ss_dssp CEEEEEESTTSSHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHH
Confidence 57999999999999999999884
No 148
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=90.47 E-value=0.067 Score=46.67 Aligned_cols=21 Identities=33% Similarity=0.436 Sum_probs=19.5
Q ss_pred EEEEeccCCcchHHHHHHHhc
Q 003013 172 VISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.|+|+|..|+|||||+.++..
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~ 22 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVK 22 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 689999999999999999876
No 149
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=90.32 E-value=0.046 Score=51.53 Aligned_cols=24 Identities=25% Similarity=0.488 Sum_probs=18.3
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
+..||||.|-.|.||||+|+.+-+
T Consensus 3 k~pIIgIaG~SGSGKTTva~~l~~ 26 (288)
T d1a7ja_ 3 KHPIISVTGSSGAGTSTVKHTFDQ 26 (288)
T ss_dssp TSCEEEEESCC---CCTHHHHHHH
T ss_pred CCCEEEEECCCCCcHHHHHHHHHH
Confidence 456999999999999999998766
No 150
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=90.32 E-value=0.068 Score=48.80 Aligned_cols=22 Identities=23% Similarity=0.421 Sum_probs=20.4
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.+++|.|..|.|||||++.+..
T Consensus 25 e~~~liGpnGaGKSTll~~i~G 46 (240)
T d2onka1 25 DYCVLLGPTGAGKSVFLELIAG 46 (240)
T ss_dssp SEEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEEECCCCChHHHHHHHHHc
Confidence 4889999999999999999977
No 151
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=90.28 E-value=0.094 Score=45.43 Aligned_cols=35 Identities=17% Similarity=0.129 Sum_probs=16.3
Q ss_pred CCCCeEEecCCCCcccc---cccccCCCCCccEeEEcC
Q 003013 716 TNLKSLKVHDLKISKAL---LEWGSNRFTSLRKLEIWG 750 (857)
Q Consensus 716 ~~L~~L~l~~~~~~~~~---~~~~~~~l~~L~~L~l~~ 750 (857)
+.|++|++++|...... ....+...++|++|++++
T Consensus 72 ~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~ 109 (167)
T d1pgva_ 72 PSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADN 109 (167)
T ss_dssp SSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCC
T ss_pred ccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCC
Confidence 44555555555433211 111344455566666654
No 152
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=90.26 E-value=0.061 Score=47.39 Aligned_cols=22 Identities=32% Similarity=0.365 Sum_probs=19.0
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.|.|.|+.|.||||.|+.+.+.
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~ 23 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEK 23 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 3668999999999999998763
No 153
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.24 E-value=0.082 Score=45.91 Aligned_cols=23 Identities=30% Similarity=0.430 Sum_probs=19.9
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.-|.|+|..|+|||||++.+.+.
T Consensus 2 fKi~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 2 YKVLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEEEECCTTSSHHHHHHHHHTC
T ss_pred eEEEEECCCCcCHHHHHHHHhCC
Confidence 45889999999999999987663
No 154
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=90.20 E-value=0.049 Score=48.09 Aligned_cols=20 Identities=20% Similarity=0.426 Sum_probs=18.8
Q ss_pred EEEeccCCcchHHHHHHHhc
Q 003013 173 ISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 173 i~I~GmgGvGKTTLa~~v~~ 192 (857)
|||+|..|+|||||...+.+
T Consensus 4 VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 4 VGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp EEEECCGGGCHHHHHHHHCS
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 89999999999999999875
No 155
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=90.16 E-value=0.08 Score=46.49 Aligned_cols=25 Identities=28% Similarity=0.303 Sum_probs=22.0
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
....|+|+|..|+|||||...+.+.
T Consensus 4 ~~~~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 4 YSGFVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEEEEECSTTSSHHHHHHHHHTS
T ss_pred cCcEEEEECCCCCCHHHHHHHHhCC
Confidence 3468999999999999999999864
No 156
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=90.03 E-value=0.071 Score=46.12 Aligned_cols=22 Identities=23% Similarity=0.386 Sum_probs=19.0
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|.+|+|||||...+.++
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHcCC
Confidence 3679999999999999998653
No 157
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.94 E-value=0.074 Score=46.34 Aligned_cols=22 Identities=27% Similarity=0.480 Sum_probs=18.8
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|.+|+|||||+....++
T Consensus 4 Ki~viG~~~vGKTsLi~r~~~~ 25 (171)
T d2erxa1 4 RVAVFGAGGVGKSSLVLRFVKG 25 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4789999999999999886654
No 158
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=89.89 E-value=0.072 Score=48.36 Aligned_cols=24 Identities=29% Similarity=0.357 Sum_probs=21.7
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.-.++||+|..|.|||||++.+..
T Consensus 25 ~Ge~~~liGpsGaGKSTll~~l~G 48 (229)
T d3d31a2 25 SGEYFVILGPTGAGKTLFLELIAG 48 (229)
T ss_dssp TTCEEEEECCCTHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCcHHHHHHHHhc
Confidence 346999999999999999999977
No 159
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=89.82 E-value=0.084 Score=48.50 Aligned_cols=25 Identities=24% Similarity=0.316 Sum_probs=22.2
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.-.++||+|.-|.|||||.+.+..-
T Consensus 27 ~Gei~glvG~nGaGKSTLl~~l~G~ 51 (238)
T d1vpla_ 27 EGEIFGLIGPNGAGKTTTLRIISTL 51 (238)
T ss_dssp TTCEEEEECCTTSSHHHHHHHHTTS
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcC
Confidence 3469999999999999999999774
No 160
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=89.77 E-value=0.093 Score=48.79 Aligned_cols=46 Identities=24% Similarity=0.283 Sum_probs=35.1
Q ss_pred eeecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 144 KVYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 144 ~~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+.||.....+++.+.+..-.. .+ .-|-|+|-.|+|||++|+.++..
T Consensus 1 ~~v~~S~~~~~~~~~~~~~a~---~~-~pvlI~Ge~GtGK~~~A~~ih~~ 46 (247)
T d1ny5a2 1 EYVFESPKMKEILEKIKKISC---AE-CPVLITGESGVGKEVVARLIHKL 46 (247)
T ss_dssp CCCCCSHHHHHHHHHHHHHTT---CC-SCEEEECSTTSSHHHHHHHHHHH
T ss_pred CeEecCHHHHHHHHHHHHHhC---CC-CCEEEECCCCcCHHHHHHHHHHh
Confidence 368888888888888765321 12 24689999999999999999863
No 161
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=89.77 E-value=0.12 Score=45.37 Aligned_cols=25 Identities=28% Similarity=0.441 Sum_probs=20.9
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+..-|.|+|.+|+|||||..++..+
T Consensus 12 k~~kI~lvG~~~vGKTsLl~~l~~~ 36 (186)
T d1f6ba_ 12 KTGKLVFLGLDNAGKTTLLHMLKDD 36 (186)
T ss_dssp CCEEEEEEEETTSSHHHHHHHHSCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCC
Confidence 4456889999999999999988654
No 162
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.67 E-value=0.075 Score=46.41 Aligned_cols=22 Identities=32% Similarity=0.342 Sum_probs=19.1
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|..|+|||||+..+.++
T Consensus 5 KivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 5 KYIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHhcC
Confidence 4789999999999999987654
No 163
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=89.65 E-value=0.086 Score=46.29 Aligned_cols=24 Identities=33% Similarity=0.472 Sum_probs=21.5
Q ss_pred ceEEEEeccCCcchHHHHHHHhcc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
...|+|+|-.|+|||||..++.+.
T Consensus 5 ~~~I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 5 CGFIAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHTC
T ss_pred ccEEEEECCCCCCHHHHHHHHhCC
Confidence 467999999999999999999864
No 164
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.61 E-value=0.16 Score=47.16 Aligned_cols=50 Identities=12% Similarity=0.049 Sum_probs=34.4
Q ss_pred CceEEEEeccCCcchHHHHHHHhcccchhcc----CCceEEEEeCCCCCHHHHH
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYNDDRVQRH----YEIKAWTCVSEDFDVFGVS 218 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~----Fd~~~wv~vs~~~~~~~i~ 218 (857)
.-+++-|+|..|+||||+|.++.-....... -..++|+.....++.....
T Consensus 33 ~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 86 (251)
T d1szpa2 33 TGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLV 86 (251)
T ss_dssp SSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSSCCCGGGGH
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHhhhhhhhccCCceEEEEeecchHHHHHHH
Confidence 4579999999999999999887654332222 2356777776666544443
No 165
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.58 E-value=0.083 Score=45.65 Aligned_cols=20 Identities=25% Similarity=0.429 Sum_probs=17.6
Q ss_pred EEEeccCCcchHHHHHHHhc
Q 003013 173 ISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 173 i~I~GmgGvGKTTLa~~v~~ 192 (857)
|.++|..|+|||||+....+
T Consensus 5 v~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 67999999999999987665
No 166
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=89.57 E-value=0.08 Score=48.76 Aligned_cols=24 Identities=25% Similarity=0.329 Sum_probs=21.8
Q ss_pred ceEEEEeccCCcchHHHHHHHhcc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-.++||.|.-|.|||||.+.+..-
T Consensus 32 Gei~~liGpnGaGKSTl~~~i~Gl 55 (240)
T d1ji0a_ 32 GQIVTLIGANGAGKTTTLSAIAGL 55 (240)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTTS
T ss_pred CCEEEEECCCCCcHHHHHHHHhCC
Confidence 469999999999999999999874
No 167
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=89.52 E-value=0.13 Score=47.69 Aligned_cols=40 Identities=25% Similarity=0.219 Sum_probs=32.8
Q ss_pred CceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeCC
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVSE 210 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs~ 210 (857)
.-.++-|+|..|+||||+|.++..+ ..+..+.++|++...
T Consensus 25 ~gsl~li~G~pGsGKT~l~~qia~~--~~~~~~~~~~is~e~ 64 (242)
T d1tf7a2 25 KDSIILATGATGTGKTLLVSRFVEN--ACANKERAILFAYEE 64 (242)
T ss_dssp SSCEEEEEECTTSSHHHHHHHHHHH--HHTTTCCEEEEESSS
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHH--HHHhccccceeeccC
Confidence 5579999999999999999999884 556677788887654
No 168
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=89.50 E-value=0.08 Score=46.04 Aligned_cols=23 Identities=35% Similarity=0.310 Sum_probs=19.6
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
--|.++|.+|+|||||+..+.++
T Consensus 6 ~Ki~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 6 FKILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHcC
Confidence 45889999999999999987553
No 169
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.50 E-value=0.079 Score=45.76 Aligned_cols=22 Identities=32% Similarity=0.370 Sum_probs=19.1
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|..|+|||||++.+.++
T Consensus 2 Kv~vvG~~~vGKTsLi~r~~~~ 23 (164)
T d1yzqa1 2 KLVFLGEQSVGKTSLITRFMYD 23 (164)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4789999999999999987654
No 170
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.46 E-value=0.081 Score=45.83 Aligned_cols=23 Identities=30% Similarity=0.290 Sum_probs=19.4
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
--|.|+|.+|+|||||++.+.++
T Consensus 5 ~KivlvG~~~vGKTsli~~~~~~ 27 (166)
T d1z0fa1 5 FKYIIIGDMGVGKSCLLHQFTEK 27 (166)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 45889999999999999887653
No 171
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.40 E-value=0.089 Score=45.60 Aligned_cols=22 Identities=27% Similarity=0.457 Sum_probs=19.1
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|.+|+|||||++.+.++
T Consensus 6 Ki~lvG~~~vGKTsli~rl~~~ 27 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIMWRFVED 27 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4779999999999999987664
No 172
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=89.36 E-value=0.19 Score=45.18 Aligned_cols=41 Identities=15% Similarity=0.256 Sum_probs=31.6
Q ss_pred cchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhc
Q 003013 147 GREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 147 G~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
+.++..+++...+..+. -.+.+-++|..|+||||+|+.+.+
T Consensus 6 w~~~~~~~l~~~~~~~~-----l~h~lLl~Gp~G~GKtt~a~~~a~ 46 (207)
T d1a5ta2 6 WLRPDFEKLVASYQAGR-----GHHALLIQALPGMGDDALIYALSR 46 (207)
T ss_dssp GGHHHHHHHHHHHHTTC-----CCSEEEEECCTTSCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHcCC-----cCeEEEEECCCCCcHHHHHHHHHH
Confidence 44667788888885432 345689999999999999998765
No 173
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.16 E-value=0.086 Score=45.90 Aligned_cols=24 Identities=38% Similarity=0.439 Sum_probs=20.3
Q ss_pred ceEEEEeccCCcchHHHHHHHhcc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+--|.|+|.+|+|||||++.+.++
T Consensus 5 ~~Ki~lvG~~~vGKTsLi~~l~~~ 28 (171)
T d2ew1a1 5 LFKIVLIGNAGVGKTCLVRRFTQG 28 (171)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEEEECCCCcCHHHHHHHHHhC
Confidence 345889999999999999987664
No 174
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=89.03 E-value=0.092 Score=48.91 Aligned_cols=24 Identities=33% Similarity=0.325 Sum_probs=21.8
Q ss_pred ceEEEEeccCCcchHHHHHHHhcc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-.++||+|.-|.|||||++.+..-
T Consensus 30 Gei~~liG~nGaGKSTLl~~i~Gl 53 (254)
T d1g6ha_ 30 GDVTLIIGPNGSGKSTLINVITGF 53 (254)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTTS
T ss_pred CCEEEEECCCCCcHHHHHHHHHCC
Confidence 468999999999999999999874
No 175
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=89.00 E-value=0.097 Score=50.44 Aligned_cols=25 Identities=24% Similarity=0.228 Sum_probs=21.0
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-.++|-+.|=|||||||+|-.+...
T Consensus 7 ~p~~i~~sGKGGVGKTTvaa~lA~~ 31 (296)
T d1ihua1 7 IPPYLFFTGKGGVGKTSISCATAIR 31 (296)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHH
T ss_pred CCeEEEEECCCcChHHHHHHHHHHH
Confidence 4578889999999999988877664
No 176
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=88.96 E-value=0.093 Score=47.45 Aligned_cols=22 Identities=36% Similarity=0.640 Sum_probs=19.9
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.|.|-|+-|+||||+++.+.+.
T Consensus 2 lI~ieG~dGsGKST~~~~L~~~ 23 (208)
T d1gsia_ 2 LIAIEGVDGAGKRTLVEKLSGA 23 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 5899999999999999998873
No 177
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=88.90 E-value=0.13 Score=50.87 Aligned_cols=49 Identities=31% Similarity=0.321 Sum_probs=34.5
Q ss_pred eeecchhHHHHHHHHHhcC-------------C-----------CCCCCCceEEEEeccCCcchHHHHHHHhc
Q 003013 144 KVYGREKEKEEIIELLLND-------------D-----------LRADDGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 144 ~~vG~~~~~~~i~~~L~~~-------------~-----------~~~~~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.+||.|+.++.+-.++... . .+.+.....|-.+|+.|||||.||+.+..
T Consensus 18 ~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvGKTElAk~LA~ 90 (364)
T d1um8a_ 18 YVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAK 90 (364)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHHHHHHH
T ss_pred eecChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccCCCcceeeeCCCCccHHHHHHHHHh
Confidence 3899999988877665210 0 00122456688899999999999999865
No 178
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=88.84 E-value=0.11 Score=46.93 Aligned_cols=21 Identities=38% Similarity=0.616 Sum_probs=18.9
Q ss_pred eEEEEeccCCcchHHHHHHHh
Q 003013 171 SVISINGMAGVGKTTLAQLVY 191 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~ 191 (857)
.+|||.|.-|.||||+|+.+-
T Consensus 3 ~iIgITG~igSGKStv~~~l~ 23 (205)
T d1jjva_ 3 YIVGLTGGIGSGKTTIANLFT 23 (205)
T ss_dssp EEEEEECSTTSCHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHH
Confidence 689999999999999998763
No 179
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.79 E-value=0.096 Score=45.38 Aligned_cols=22 Identities=27% Similarity=0.339 Sum_probs=19.0
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|.+|+|||||+....++
T Consensus 5 KivlvG~~~vGKTsLi~r~~~~ 26 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCEN 26 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5789999999999999987553
No 180
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.79 E-value=0.095 Score=45.78 Aligned_cols=22 Identities=27% Similarity=0.329 Sum_probs=19.0
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
--|.++|..|+|||||+..+.+
T Consensus 6 ~KI~lvG~~~vGKTsll~~~~~ 27 (174)
T d2bmea1 6 FKFLVIGNAGTGKSCLLHQFIE 27 (174)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 3588999999999999998654
No 181
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.70 E-value=0.23 Score=44.94 Aligned_cols=25 Identities=32% Similarity=0.517 Sum_probs=21.8
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+-..|.|-|+-|+||||+++.+.+.
T Consensus 2 kGk~I~iEG~DGsGKST~~~~L~~~ 26 (214)
T d1tmka_ 2 RGKLILIEGLDRTGKTTQCNILYKK 26 (214)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHH
T ss_pred CeEEEEEECCCCCcHHHHHHHHHHH
Confidence 3468999999999999999998874
No 182
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=88.68 E-value=0.078 Score=48.53 Aligned_cols=24 Identities=29% Similarity=0.411 Sum_probs=21.6
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.-.++||.|..|.|||||++.+..
T Consensus 30 ~Ge~~~iiG~sGsGKSTll~~i~g 53 (242)
T d1oxxk2 30 NGERFGILGPSGAGKTTFMRIIAG 53 (242)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCcHHHHHHHHHc
Confidence 347999999999999999999976
No 183
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.60 E-value=0.1 Score=45.40 Aligned_cols=22 Identities=23% Similarity=0.342 Sum_probs=19.2
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|..|+|||||++.+.++
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~ 29 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4799999999999999987654
No 184
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=88.51 E-value=0.096 Score=49.17 Aligned_cols=25 Identities=24% Similarity=0.283 Sum_probs=22.2
Q ss_pred CCceEEEEeccCCcchHHHHHHHhc
Q 003013 168 DGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 168 ~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
++++-|+|+|.+|.|||||+.++..
T Consensus 4 ~~iRni~i~gh~~~GKTtL~e~ll~ 28 (276)
T d2bv3a2 4 KRLRNIGIAAHIDAGKTTTTERILY 28 (276)
T ss_dssp GGEEEEEEEECTTSCHHHHHHHHHH
T ss_pred hhceEEEEEeCCCCCHHHHHHHHHH
Confidence 3688899999999999999999854
No 185
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=88.45 E-value=0.084 Score=46.70 Aligned_cols=27 Identities=19% Similarity=0.261 Sum_probs=22.9
Q ss_pred CCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 167 DDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 167 ~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.++...|+|+|..++|||||..++...
T Consensus 13 ~~~~~~I~lvG~~NvGKSSL~n~L~~~ 39 (188)
T d1puia_ 13 SDTGIEVAFAGRSNAGKSSALNTLTNQ 39 (188)
T ss_dssp CSCSEEEEEEECTTSSHHHHHTTTCCC
T ss_pred CccCCEEEEECCCCCCHHHHHHHHhCC
Confidence 346678999999999999999988663
No 186
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.27 E-value=0.11 Score=45.25 Aligned_cols=23 Identities=26% Similarity=0.378 Sum_probs=19.6
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.-|.|+|..|+|||||.....++
T Consensus 6 ~Ki~lvG~~~vGKTsLi~r~~~~ 28 (171)
T d2erya1 6 YRLVVVGGGGVGKSALTIQFIQS 28 (171)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHhC
Confidence 45899999999999999886653
No 187
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.25 E-value=0.11 Score=45.35 Aligned_cols=25 Identities=24% Similarity=0.335 Sum_probs=20.1
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
..--|.|+|.+|+|||||+..+.++
T Consensus 5 ~~~Kv~lvG~~~vGKTsLi~r~~~~ 29 (173)
T d2fn4a1 5 ETHKLVVVGGGGVGKSALTIQFIQS 29 (173)
T ss_dssp CEEEEEEEECTTSSHHHHHHHHHHS
T ss_pred CeEEEEEECCCCcCHHHHHHHHHhC
Confidence 3345779999999999999887653
No 188
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=88.23 E-value=0.11 Score=46.61 Aligned_cols=23 Identities=22% Similarity=0.447 Sum_probs=20.5
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.+|-|+|+.|+|||||++.+...
T Consensus 3 ~livi~GPSG~GK~tl~~~L~~~ 25 (205)
T d1s96a_ 3 TLYIVSAPSGAGKSSLIQALLKT 25 (205)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHhh
Confidence 57889999999999999988773
No 189
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.22 E-value=0.12 Score=45.15 Aligned_cols=22 Identities=45% Similarity=0.572 Sum_probs=19.0
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|.+|+|||||+....++
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~~ 25 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVND 25 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHcC
Confidence 4789999999999999987553
No 190
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=88.12 E-value=0.31 Score=45.28 Aligned_cols=50 Identities=18% Similarity=0.171 Sum_probs=35.0
Q ss_pred CceEEEEeccCCcchHHHHHHHhcccch----hccCCceEEEEeCCCCCHHHHH
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYNDDRV----QRHYEIKAWTCVSEDFDVFGVS 218 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~~~~----~~~Fd~~~wv~vs~~~~~~~i~ 218 (857)
.-+++-|+|.+|+||||+|.++...... ......++|+.....++...+.
T Consensus 35 ~G~~~li~G~pGsGKT~~~lq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (254)
T d1pzna2 35 TQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPERIR 88 (254)
T ss_dssp SSEEEEEEESTTSSHHHHHHHHHHHTTSCGGGTSCSCEEEEEESSSCCCHHHHH
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHHHhhchHHhcCCCceEEEEeccchhHHHHHH
Confidence 5579999999999999999987653221 1224567777777766655443
No 191
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.05 E-value=0.12 Score=45.68 Aligned_cols=23 Identities=30% Similarity=0.309 Sum_probs=19.6
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
--|.|+|-.|+|||||+..+.++
T Consensus 6 ~Ki~ivG~~~vGKTsLi~~l~~~ 28 (186)
T d2f7sa1 6 IKLLALGDSGVGKTTFLYRYTDN 28 (186)
T ss_dssp EEEEEESCTTSSHHHHHHHHHCS
T ss_pred EEEEEECCCCcCHHHHHHHHhcC
Confidence 35789999999999999988764
No 192
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.04 E-value=0.11 Score=44.80 Aligned_cols=22 Identities=36% Similarity=0.446 Sum_probs=19.2
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|..|+|||||+..+.++
T Consensus 4 Ki~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4789999999999999987664
No 193
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.04 E-value=0.11 Score=44.80 Aligned_cols=22 Identities=27% Similarity=0.522 Sum_probs=19.3
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|-.|+|||||+..+.++
T Consensus 5 Ki~viG~~~vGKTsli~~l~~~ 26 (166)
T d1ctqa_ 5 KLVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4889999999999999987664
No 194
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.96 E-value=0.12 Score=44.78 Aligned_cols=23 Identities=26% Similarity=0.397 Sum_probs=19.7
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.-|.|+|-.|+|||||+++..++
T Consensus 4 ~Ki~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 4 YKVVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCcCHHHHHHHHHhC
Confidence 35889999999999999887664
No 195
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=87.91 E-value=0.12 Score=45.55 Aligned_cols=22 Identities=32% Similarity=0.404 Sum_probs=20.1
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.|+|+|..|+|||||..++.+.
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 5899999999999999999874
No 196
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.82 E-value=0.12 Score=44.39 Aligned_cols=22 Identities=36% Similarity=0.552 Sum_probs=19.4
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|.+|+|||||+..+-+.
T Consensus 2 KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4889999999999999987663
No 197
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.70 E-value=0.12 Score=44.61 Aligned_cols=22 Identities=27% Similarity=0.442 Sum_probs=19.0
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|..|+|||+|++...++
T Consensus 5 KivvvG~~~vGKTsli~r~~~~ 26 (167)
T d1c1ya_ 5 KLVVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 4789999999999999987654
No 198
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=87.69 E-value=0.09 Score=46.50 Aligned_cols=22 Identities=32% Similarity=0.519 Sum_probs=19.5
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|||+|..|+|||||...+.+.
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~~ 24 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSSA 24 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEEE
T ss_pred eEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999998653
No 199
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=87.64 E-value=0.1 Score=47.79 Aligned_cols=24 Identities=25% Similarity=0.368 Sum_probs=21.5
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.-.++||+|.-|.|||||.+.+..
T Consensus 24 ~Gei~~iiG~nGaGKSTLl~~l~G 47 (231)
T d1l7vc_ 24 AGEILHLVGPNGAGKSTLLARMAG 47 (231)
T ss_dssp TTCEEECBCCTTSSHHHHHHHHHT
T ss_pred CCCEEEEECCCCCcHHHHHHHHhC
Confidence 346999999999999999999876
No 200
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.63 E-value=0.13 Score=44.58 Aligned_cols=24 Identities=29% Similarity=0.347 Sum_probs=19.9
Q ss_pred ceEEEEeccCCcchHHHHHHHhcc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
..-|.|+|-.|+|||||+....++
T Consensus 4 ~~Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 4 SRKIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHS
T ss_pred ceEEEEECCCCcCHHHHHHHHHhC
Confidence 356889999999999999986543
No 201
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.58 E-value=0.13 Score=44.60 Aligned_cols=21 Identities=38% Similarity=0.564 Sum_probs=18.5
Q ss_pred EEEeccCCcchHHHHHHHhcc
Q 003013 173 ISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 173 i~I~GmgGvGKTTLa~~v~~~ 193 (857)
|.++|.+|+|||+|.+...++
T Consensus 5 i~lvG~~~vGKTsli~r~~~~ 25 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTK 25 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 579999999999999987764
No 202
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=87.54 E-value=0.13 Score=45.40 Aligned_cols=23 Identities=35% Similarity=0.492 Sum_probs=20.1
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
--|+|+|..|+|||||..++.+.
T Consensus 9 ~kV~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 9 IKVAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp EEEEEECSTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
Confidence 35899999999999999988764
No 203
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=87.50 E-value=0.21 Score=44.86 Aligned_cols=35 Identities=29% Similarity=0.434 Sum_probs=27.6
Q ss_pred hHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 150 KEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 150 ~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+..+.+.++|. -++..++|..|||||||..++..+
T Consensus 84 ~g~~~L~~~l~---------~kt~~~~G~SGVGKSTLiN~L~~~ 118 (225)
T d1u0la2 84 MGIEELKEYLK---------GKISTMAGLSGVGKSSLLNAINPG 118 (225)
T ss_dssp TTHHHHHHHHS---------SSEEEEECSTTSSHHHHHHHHSTT
T ss_pred hhHhhHHHHhc---------CCeEEEECCCCCCHHHHHHhhcch
Confidence 34667777772 257789999999999999998764
No 204
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.49 E-value=0.13 Score=46.31 Aligned_cols=23 Identities=22% Similarity=0.293 Sum_probs=20.2
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+.|.|+|.+|+|||||..++.++
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHcC
Confidence 36899999999999999988764
No 205
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.47 E-value=0.14 Score=45.67 Aligned_cols=24 Identities=29% Similarity=0.398 Sum_probs=20.3
Q ss_pred ceEEEEeccCCcchHHHHHHHhcc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+.-|.|+|.+|+|||||+..+.++
T Consensus 6 ~~KivvvG~~~vGKTsli~~l~~~ 29 (194)
T d2bcgy1 6 LFKLLLIGNSGVGKSCLLLRFSDD 29 (194)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEEEECCCCcCHHHHHHHHhhC
Confidence 345889999999999999987664
No 206
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.44 E-value=0.13 Score=44.89 Aligned_cols=23 Identities=26% Similarity=0.372 Sum_probs=19.8
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
--|.|+|..|+|||||+..+.++
T Consensus 5 ~Ki~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 5 FKVVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 45889999999999999987654
No 207
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.26 E-value=0.14 Score=44.88 Aligned_cols=21 Identities=43% Similarity=0.567 Sum_probs=18.6
Q ss_pred EEEeccCCcchHHHHHHHhcc
Q 003013 173 ISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 173 i~I~GmgGvGKTTLa~~v~~~ 193 (857)
|.|+|.+|+|||||++.+-++
T Consensus 10 i~vvG~~~vGKTsli~~l~~~ 30 (177)
T d1x3sa1 10 ILIIGESGVGKSSLLLRFTDD 30 (177)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHhC
Confidence 889999999999999987653
No 208
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=87.21 E-value=0.13 Score=45.69 Aligned_cols=21 Identities=19% Similarity=0.267 Sum_probs=17.9
Q ss_pred EEEEeccCCcchHHHHHHHhc
Q 003013 172 VISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~ 192 (857)
-|.++|-||+|||||+++.-.
T Consensus 4 KivllG~~~vGKTsl~~r~~~ 24 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVKQMKI 24 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhh
Confidence 468999999999999988644
No 209
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.16 E-value=0.13 Score=45.94 Aligned_cols=19 Identities=26% Similarity=0.364 Sum_probs=17.3
Q ss_pred EEEEeccCCcchHHHHHHH
Q 003013 172 VISINGMAGVGKTTLAQLV 190 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v 190 (857)
-|.|+|.+|+|||||++..
T Consensus 4 KivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEEECSTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 4679999999999999987
No 210
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=87.09 E-value=0.25 Score=41.55 Aligned_cols=26 Identities=31% Similarity=0.365 Sum_probs=22.8
Q ss_pred CceEEEEeccCCcchHHHHHHHhccc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYNDD 194 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~~ 194 (857)
.-.+|.+.|-=|.||||++|.+.+..
T Consensus 32 ~g~ii~L~G~LGaGKTtfvr~~~~~l 57 (158)
T d1htwa_ 32 KAIMVYLNGDLGAGKTTLTRGMLQGI 57 (158)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHHT
T ss_pred CCeEEEEecCCCccHHHHHHHHHhhc
Confidence 44699999999999999999998854
No 211
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=86.94 E-value=0.1 Score=48.46 Aligned_cols=24 Identities=33% Similarity=0.476 Sum_probs=21.1
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.-..++|+|..|.|||||++.+..
T Consensus 43 ~Ge~vaivG~sGsGKSTLl~ll~g 66 (255)
T d2hyda1 43 KGETVAFVGMSGGGKSTLINLIPR 66 (255)
T ss_dssp TTCEEEEECSTTSSHHHHHTTTTT
T ss_pred CCCEEEEECCCCCcHHHHHHHHHh
Confidence 346899999999999999998865
No 212
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.93 E-value=0.43 Score=44.30 Aligned_cols=49 Identities=12% Similarity=0.034 Sum_probs=35.7
Q ss_pred CCceEEEEeccCCcchHHHHHHHhccc----chhccCCceEEEEeCCCCCHHH
Q 003013 168 DGFSVISINGMAGVGKTTLAQLVYNDD----RVQRHYEIKAWTCVSEDFDVFG 216 (857)
Q Consensus 168 ~~~~vi~I~GmgGvGKTTLa~~v~~~~----~~~~~Fd~~~wv~vs~~~~~~~ 216 (857)
..-+++-|+|..|.|||++|.++.... .....+..+.|+.....++...
T Consensus 35 p~G~~~~i~G~~GsGKT~lalq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (258)
T d1v5wa_ 35 ESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDR 87 (258)
T ss_dssp CSSEEEEEECCTTCTHHHHHHHHHHHTTSCBTTTBCCCEEEEEESSSCCCHHH
T ss_pred cCCEEEEEECCCCCCHHHHHHHHHHHHHhhhhcccccceEEEechHHHHHHHH
Confidence 356799999999999999999886432 2234566778888777666443
No 213
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.91 E-value=0.14 Score=45.11 Aligned_cols=24 Identities=33% Similarity=0.297 Sum_probs=20.0
Q ss_pred ceEEEEeccCCcchHHHHHHHhcc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+--|.|+|..|+|||||++...++
T Consensus 9 ~~Ki~lvG~~~vGKTsLi~r~~~~ 32 (185)
T d2atxa1 9 MLKCVVVGDGAVGKTCLLMSYAND 32 (185)
T ss_dssp EEEEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEEEECCCCCCHHHHHHHHhhC
Confidence 345899999999999999886654
No 214
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.81 E-value=0.17 Score=44.19 Aligned_cols=22 Identities=32% Similarity=0.341 Sum_probs=18.7
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|..|+|||||+....++
T Consensus 4 KivvvG~~~vGKTsLi~~~~~~ 25 (177)
T d1kmqa_ 4 KLVIVGDGACGKTCLLIVNSKD 25 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4678999999999999887654
No 215
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=86.76 E-value=0.15 Score=43.85 Aligned_cols=22 Identities=23% Similarity=0.433 Sum_probs=18.5
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|..|+|||||+..+.++
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~ 25 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIASG 25 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 4678999999999999987553
No 216
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=86.75 E-value=0.17 Score=46.14 Aligned_cols=25 Identities=36% Similarity=0.601 Sum_probs=22.6
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.+.|.-|.|.-|.|||||.+++.+.
T Consensus 2 ~iPv~iitGFLGaGKTTll~~lL~~ 26 (222)
T d1nija1 2 PIAVTLLTGFLGAGKTTLLRHILNE 26 (222)
T ss_dssp CEEEEEEEESSSSSCHHHHHHHHHS
T ss_pred CCCEEEEeeCCCCCHHHHHHHHHhc
Confidence 6789999999999999999998774
No 217
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.63 E-value=0.15 Score=44.81 Aligned_cols=23 Identities=26% Similarity=0.199 Sum_probs=19.3
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
--|.|+|..|+|||||+++..++
T Consensus 6 iKivviG~~~vGKTsli~~~~~~ 28 (183)
T d1mh1a_ 6 IKCVVVGDGAVGKTCLLISYTTN 28 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHhC
Confidence 35889999999999999886553
No 218
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=86.63 E-value=0.41 Score=42.99 Aligned_cols=36 Identities=31% Similarity=0.332 Sum_probs=25.5
Q ss_pred eEEEEeccCCcchHHHHHHHhcccchhccCCceEEEE
Q 003013 171 SVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTC 207 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~ 207 (857)
+.|.|-|.-|+||||+++.+.+..+ +..+..+++..
T Consensus 3 kfIviEG~dGsGKsT~~~~L~~~L~-~~g~~~~~~~~ 38 (210)
T d4tmka_ 3 KYIVIEGLEGAGKTTARNVVVETLE-QLGIRDMVFTR 38 (210)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHH-HTTCCCEEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHH-hCCCCeEEEec
Confidence 5689999999999999999877322 22244455443
No 219
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.54 E-value=0.16 Score=45.75 Aligned_cols=23 Identities=39% Similarity=0.499 Sum_probs=20.4
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
..|.|+|.+|+|||||...+.+.
T Consensus 4 p~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 4 PSIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHhCC
Confidence 47899999999999999998764
No 220
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.48 E-value=0.16 Score=44.04 Aligned_cols=22 Identities=36% Similarity=0.525 Sum_probs=19.1
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.-|.++|.+|+|||||++.+..
T Consensus 4 ~Kv~lvG~~~vGKTsLi~~~~~ 25 (172)
T d2g3ya1 4 YRVVLIGEQGVGKSTLANIFAG 25 (172)
T ss_dssp EEEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEEECCCCcCHHHHHHHHHh
Confidence 4688999999999999998754
No 221
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.45 E-value=0.16 Score=44.00 Aligned_cols=22 Identities=23% Similarity=0.377 Sum_probs=18.4
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|..|+|||||+....++
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~~~ 26 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3678999999999999986553
No 222
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=86.26 E-value=0.2 Score=43.27 Aligned_cols=24 Identities=29% Similarity=0.472 Sum_probs=20.3
Q ss_pred ceEEEEeccCCcchHHHHHHHhcc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+.-|.|+|-.|+|||||++.+.++
T Consensus 4 ~~KivlvG~~~vGKTsli~~~~~~ 27 (168)
T d1u8za_ 4 LHKVIMVGSGGVGKSALTLQFMYD 27 (168)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHS
T ss_pred eeEEEEECCCCcCHHHHHHHHHhC
Confidence 467889999999999999986553
No 223
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.18 E-value=0.17 Score=44.13 Aligned_cols=23 Identities=22% Similarity=0.276 Sum_probs=19.5
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
--|.|+|..|+|||||+....++
T Consensus 6 ~ki~vlG~~~vGKTsLi~~~~~~ 28 (175)
T d2bmja1 6 LRLGVLGDARSGKSSLIHRFLTG 28 (175)
T ss_dssp EEEEEECCTTTTHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHhC
Confidence 45789999999999999977553
No 224
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=86.11 E-value=0.27 Score=42.56 Aligned_cols=24 Identities=25% Similarity=0.295 Sum_probs=20.3
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+++ |.|+|.+|+|||||.+++.++
T Consensus 12 ~~k-IvlvG~~~vGKTSli~rl~~~ 35 (173)
T d1e0sa_ 12 EMR-ILMLGLDAAGKTTILYKLKLG 35 (173)
T ss_dssp CEE-EEEEEETTSSHHHHHHHTTCC
T ss_pred eEE-EEEECCCCCCHHHHHHHHhcC
Confidence 455 569999999999999998764
No 225
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=86.10 E-value=0.22 Score=42.92 Aligned_cols=35 Identities=9% Similarity=0.141 Sum_probs=18.1
Q ss_pred CCceEEEccCCCCCC-----cchhhhCCCCCCcEEeEcCC
Q 003013 387 CRLRFLELSYCQGLT-----KLPQALLTLCSLTDMKILGC 421 (857)
Q Consensus 387 ~~L~~L~L~~~~~l~-----~lp~~~~~l~~L~~L~l~~~ 421 (857)
+.|++|+|+++..+. .+-..+...++|++|++++|
T Consensus 15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n 54 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANT 54 (167)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTS
T ss_pred CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeecccc
Confidence 455555555433222 12334555566677776665
No 226
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.10 E-value=0.11 Score=45.05 Aligned_cols=22 Identities=27% Similarity=0.398 Sum_probs=17.8
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.|+|..|+|||||+....++
T Consensus 5 Ki~vvG~~~vGKTsli~~~~~~ 26 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLTG 26 (170)
T ss_dssp EEEEEECTTSSHHHHHHTTC--
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4789999999999999876553
No 227
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=86.03 E-value=0.17 Score=44.51 Aligned_cols=22 Identities=41% Similarity=0.510 Sum_probs=19.0
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.++|..|+|||||+..+.+.
T Consensus 4 Kv~vvG~~~vGKSSLi~~l~~~ 25 (184)
T d1vg8a_ 4 KVIILGDSGVGKTSLMNQYVNK 25 (184)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4789999999999999987653
No 228
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=86.02 E-value=0.18 Score=43.14 Aligned_cols=22 Identities=23% Similarity=0.374 Sum_probs=19.1
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|+|+|..|+|||||..++.+.
T Consensus 3 kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4789999999999999998753
No 229
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=85.92 E-value=0.19 Score=46.97 Aligned_cols=22 Identities=36% Similarity=0.616 Sum_probs=19.8
Q ss_pred ceEEEEeccCCcchHHHHHHHh
Q 003013 170 FSVISINGMAGVGKTTLAQLVY 191 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~ 191 (857)
++-|+|+|..|.|||||+.++.
T Consensus 2 iRNv~iiGh~~~GKTtL~e~ll 23 (267)
T d2dy1a2 2 IRTVALVGHAGSGKTTLTEALL 23 (267)
T ss_dssp EEEEEEEESTTSSHHHHHHHHH
T ss_pred eeEEEEEcCCCCcHHHHHHHHH
Confidence 4779999999999999999884
No 230
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.84 E-value=0.18 Score=43.67 Aligned_cols=24 Identities=29% Similarity=0.299 Sum_probs=19.9
Q ss_pred ceEEEEeccCCcchHHHHHHHhcc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
..-|.|+|-+|+|||||++...+.
T Consensus 6 ~fKi~vvG~~~vGKTsli~~~~~~ 29 (170)
T d2g6ba1 6 AFKVMLVGDSGVGKTCLLVRFKDG 29 (170)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEEECCCCcCHHHHHHHHHhC
Confidence 346899999999999999976553
No 231
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=85.66 E-value=0.35 Score=48.92 Aligned_cols=49 Identities=29% Similarity=0.378 Sum_probs=34.9
Q ss_pred eeecchhHHHHHHHHHhc--------CCCCCCCCceEEEEeccCCcchHHHHHHHhc
Q 003013 144 KVYGREKEKEEIIELLLN--------DDLRADDGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 144 ~~vG~~~~~~~i~~~L~~--------~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.+||.|+.++.+--++.+ +..+..=.-+=|-++|+.|+|||.||+.+..
T Consensus 15 yVvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk 71 (443)
T d1g41a_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAK 71 (443)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHH
T ss_pred cccCcHHHHHHHHHHHHHHHHHhhcccccccccccccEEEECCCCCCHHHHHHHHHH
Confidence 389999998888766632 1110111234588999999999999999877
No 232
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=85.48 E-value=0.21 Score=46.25 Aligned_cols=22 Identities=27% Similarity=0.496 Sum_probs=20.2
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.+|||.|.-|.||||.|+.+.+
T Consensus 2 ~iIgiTG~igSGKsTva~~l~e 23 (241)
T d1deka_ 2 KLIFLSGVKRSGKDTTADFIMS 23 (241)
T ss_dssp EEEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHH
Confidence 6899999999999999998855
No 233
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.47 E-value=0.21 Score=43.20 Aligned_cols=23 Identities=26% Similarity=0.473 Sum_probs=19.4
Q ss_pred eEEEEeccCCcchHHHHHHHhcc
Q 003013 171 SVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.-|.++|-.|+|||||++...++
T Consensus 5 ~Ki~lvG~~~vGKTsll~~~~~~ 27 (169)
T d1x1ra1 5 YKLVVVGDGGVGKSALTIQFFQK 27 (169)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 34678999999999999987764
No 234
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=85.40 E-value=0.15 Score=44.81 Aligned_cols=24 Identities=33% Similarity=0.288 Sum_probs=19.4
Q ss_pred ceEEEEeccCCcchHHHHHHHhcc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
---|.|+|..|+|||||...+.+.
T Consensus 17 ~~KI~lvG~~~vGKTsLi~~l~~~ 40 (182)
T d1moza_ 17 ELRILILGLDGAGKTTILYRLQIG 40 (182)
T ss_dssp CEEEEEEEETTSSHHHHHHHTCCS
T ss_pred eEEEEEECCCCCCHHHHHHHHhcC
Confidence 345569999999999999987553
No 235
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.28 E-value=0.2 Score=43.88 Aligned_cols=22 Identities=32% Similarity=0.425 Sum_probs=18.8
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.++|..|+|||+|++...++
T Consensus 4 KivliG~~~vGKTsli~r~~~~ 25 (179)
T d1m7ba_ 4 KIVVVGDSQCGKTALLHVFAKD 25 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4679999999999999877664
No 236
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=84.87 E-value=0.13 Score=44.36 Aligned_cols=14 Identities=7% Similarity=0.185 Sum_probs=7.4
Q ss_pred hcCCCCCeEeccCC
Q 003013 353 QDIISLNRLQIKGC 366 (857)
Q Consensus 353 ~~~~~L~~L~l~~~ 366 (857)
...+.|++|+++++
T Consensus 14 ~~~~~L~~L~L~~~ 27 (166)
T d1io0a_ 14 NNDPDLEEVNLNNI 27 (166)
T ss_dssp TTCTTCCEEECTTC
T ss_pred hcCCCCcEEEcCCC
Confidence 44455555555553
No 237
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=84.86 E-value=0.76 Score=40.56 Aligned_cols=58 Identities=10% Similarity=-0.036 Sum_probs=35.2
Q ss_pred CceEEEEeccCCcchHHHHHHHhcccc--hhccCCceEEEEeCCCCCHHHHHHHHHHHccC
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYNDDR--VQRHYEIKAWTCVSEDFDVFGVSKFILNSIAK 227 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~~~--~~~~Fd~~~wv~vs~~~~~~~i~~~i~~~l~~ 227 (857)
....+-++|..|.||||+|+.+-+... ..+|-|....-.-++...++.|.. |.+.+..
T Consensus 14 ~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~~~I~Id~IR~-i~~~~~~ 73 (198)
T d2gnoa2 14 EGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGENIGIDDIRT-IKDFLNY 73 (198)
T ss_dssp SSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSSSCBCHHHHHH-HHHHHTS
T ss_pred CCceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCcCCCCHHHHHH-HHHHHhh
Confidence 678999999999999999998877321 122334332222233445555543 5555543
No 238
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.52 E-value=0.23 Score=43.17 Aligned_cols=24 Identities=25% Similarity=0.362 Sum_probs=19.9
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.+.-|.|+|-.|+|||||+..+.+
T Consensus 5 ~~~KI~vvG~~~vGKSSli~~~~~ 28 (174)
T d1wmsa_ 5 SLFKVILLGDGGVGKSSLMNRYVT 28 (174)
T ss_dssp EEEEEEEECCTTSSHHHHHHHHHH
T ss_pred ceEEEEEECCCCCCHHHHHHHHHh
Confidence 455689999999999999977654
No 239
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=84.45 E-value=0.58 Score=43.37 Aligned_cols=65 Identities=25% Similarity=0.263 Sum_probs=46.0
Q ss_pred HHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeCCCC-CHHHHHHHHHHH
Q 003013 154 EIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVSEDF-DVFGVSKFILNS 224 (857)
Q Consensus 154 ~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs~~~-~~~~i~~~i~~~ 224 (857)
++++.+.-=. +-..++|.|-.|+|||||+..+.++. .+.+=+.++++-+.+.. ++.++.++..+.
T Consensus 57 raID~l~pig-----kGQr~~If~~~g~GKt~l~~~i~~~~-~~~~~~v~V~~~iGer~~ev~~~~~~~~~~ 122 (276)
T d2jdid3 57 KVVDLLAPYA-----KGGKIGLFGGAGVGKTVLIMELINNV-AKAHGGYSVFAGVGERTREGNDLYHEMIES 122 (276)
T ss_dssp HHHHHHSCEE-----TTCEEEEEECTTSSHHHHHHHHHHHH-TTTCSSEEEEEEESCCHHHHHHHHHHHHHH
T ss_pred eeeeeecccc-----CCCEEEeeCCCCCCHHHHHHHHHHHH-HhhCCCeEEEEEeccChHHHHHHHHHHHhc
Confidence 6677775321 34579999999999999999887742 22334567888888865 466777777664
No 240
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=83.94 E-value=0.23 Score=44.14 Aligned_cols=21 Identities=19% Similarity=0.246 Sum_probs=18.1
Q ss_pred EEEEeccCCcchHHHHHHHhc
Q 003013 172 VISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~ 192 (857)
-|-++|-+|+|||||.+..-+
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~ 24 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRI 24 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 467999999999999998744
No 241
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=83.81 E-value=0.11 Score=44.66 Aligned_cols=22 Identities=36% Similarity=0.516 Sum_probs=19.5
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|+++|..|+|||||+.++.+.
T Consensus 2 kI~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 2 RMVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEEECCHHHHTCHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 3899999999999999998763
No 242
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=83.79 E-value=0.54 Score=43.71 Aligned_cols=54 Identities=19% Similarity=0.164 Sum_probs=41.4
Q ss_pred CceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeCCCCCHHHHHHHHHHHccCCC
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVSEDFDVFGVSKFILNSIAKDQ 229 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs~~~~~~~i~~~i~~~l~~~~ 229 (857)
.-+++-|+|..|.||||+|.++.-.++... -.++|+..-..++.+ ++++++.+.
T Consensus 56 ~g~itei~G~~~sGKT~l~l~~~~~aqk~g--~~v~yiDtE~~~~~~-----~a~~~Gvd~ 109 (268)
T d1xp8a1 56 RGRITEIYGPESGGKTTLALAIVAQAQKAG--GTCAFIDAEHALDPV-----YARALGVNT 109 (268)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHHTT--CCEEEEESSCCCCHH-----HHHHTTCCG
T ss_pred CceEEEEecCCccchHHHHHHHHHHHHhCC--CEEEEEECCccCCHH-----HHHHhCCCc
Confidence 557999999999999999999887644333 358899888888874 566666543
No 243
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.43 E-value=0.26 Score=43.57 Aligned_cols=22 Identities=27% Similarity=0.235 Sum_probs=18.2
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|.++|-.|+|||+|+....++
T Consensus 5 KvvllG~~~vGKTSli~r~~~~ 26 (191)
T d2ngra_ 5 KCVVVGDGAVGKTCLLISYTTN 26 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 3679999999999998876553
No 244
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.16 E-value=0.22 Score=45.37 Aligned_cols=25 Identities=20% Similarity=0.165 Sum_probs=21.5
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.-.++-|.|.+|+||||+|.++..+
T Consensus 22 ~G~v~~i~G~~GsGKT~l~l~la~~ 46 (242)
T d1n0wa_ 22 TGSITEMFGEFRTGKTQICHTLAVT 46 (242)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHHH
Confidence 4479999999999999999888654
No 245
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=82.99 E-value=0.61 Score=43.31 Aligned_cols=40 Identities=23% Similarity=0.323 Sum_probs=28.7
Q ss_pred hHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 150 KEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 150 ~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
....++...+.... .+--.|.|+|..|+|||||...+++.
T Consensus 16 ~~l~e~~~~l~~~~----~~~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 16 TKLLELLGNLKQED----VNSLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp HHHHHHHHHHHHTT----CCEEEEEEEESTTSSHHHHHHHHHTS
T ss_pred HHHHHHHHHHhhcC----CCCcEEEEECCCCCcHHHHHHHHhCC
Confidence 33445555554432 24457889999999999999999875
No 246
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=82.97 E-value=0.27 Score=44.65 Aligned_cols=23 Identities=17% Similarity=0.209 Sum_probs=19.7
Q ss_pred ceEEEEeccCCcchHHHHHHHhc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
..-|-+.|.+|+|||||++....
T Consensus 6 ~~KilllG~~~vGKTsll~~~~~ 28 (221)
T d1azta2 6 THRLLLLGAGESGKSTIVKQMRI 28 (221)
T ss_dssp SEEEEEECSTTSSHHHHHHHHHH
T ss_pred cCEEEEECCCCCCHHHHHHHHhc
Confidence 35688999999999999998754
No 247
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=82.79 E-value=0.43 Score=44.57 Aligned_cols=47 Identities=17% Similarity=0.008 Sum_probs=33.8
Q ss_pred HHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcccchhccCCceEEE
Q 003013 154 EIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWT 206 (857)
Q Consensus 154 ~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv 206 (857)
++++.+.-=. .-..++|.|-.|+|||||+..+.+... .++-++++++
T Consensus 32 r~ID~l~Pig-----rGQr~~I~g~~g~GKT~l~~~i~~~~~-~~~~~~v~~~ 78 (289)
T d1xpua3 32 RVLDLASPIG-----RGQRGLIVAPPKAGKTMLLQNIAQSIA-YNHPDCVLMV 78 (289)
T ss_dssp HHHHHHSCCB-----TTCEEEEEECSSSSHHHHHHHHHHHHH-HHCTTSEEEE
T ss_pred eeeeeccccc-----CCCeeeEeCCCCCCHHHHHHHHHHHHh-hcCCCeEEEE
Confidence 6788886422 457899999999999999999987522 3344555554
No 248
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.65 E-value=0.19 Score=43.63 Aligned_cols=23 Identities=26% Similarity=0.286 Sum_probs=10.1
Q ss_pred ceEEEEeccCCcchHHHHHHHhc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
+--|.|+|-+|+|||||+..+.+
T Consensus 6 ~~Ki~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 6 LFKLLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEEEEECCCCC-----------
T ss_pred EEEEEEECCCCcCHHHHHHHHHh
Confidence 34588999999999999986654
No 249
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=82.49 E-value=0.69 Score=42.90 Aligned_cols=47 Identities=23% Similarity=0.169 Sum_probs=37.5
Q ss_pred CCceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeCCCCCHHH
Q 003013 168 DGFSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVSEDFDVFG 216 (857)
Q Consensus 168 ~~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs~~~~~~~ 216 (857)
+.-+++-|+|..|+||||+|-++....+..+. .++|+..-..++.+.
T Consensus 58 ~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~--~~vyIDtE~~~~~e~ 104 (269)
T d1mo6a1 58 PRGRVIEIYGPESSGKTTVALHAVANAQAAGG--VAAFIDAEHALDPDY 104 (269)
T ss_dssp CSSSEEEEECSSSSSHHHHHHHHHHHHHHTTC--EEEEEESSCCCCHHH
T ss_pred ccceeEEEecCCCcHHHHHHHHHHHHHhcCCC--EEEEEECCccCCHHH
Confidence 45689999999999999999888775444433 589999888888765
No 250
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=82.43 E-value=0.31 Score=46.57 Aligned_cols=22 Identities=23% Similarity=0.413 Sum_probs=19.4
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.++-++|.+|+|||.||+.+..
T Consensus 124 g~~l~~G~pG~GKT~la~ala~ 145 (321)
T d1w44a_ 124 GMVIVTGKGNSGKTPLVHALGE 145 (321)
T ss_dssp EEEEEECSSSSCHHHHHHHHHH
T ss_pred ceEEEECCCCccHHHHHHHHHH
Confidence 4566689999999999999988
No 251
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=82.34 E-value=0.33 Score=43.99 Aligned_cols=23 Identities=22% Similarity=0.252 Sum_probs=19.5
Q ss_pred eEEEEeccC-CcchHHHHHHHhcc
Q 003013 171 SVISINGMA-GVGKTTLAQLVYND 193 (857)
Q Consensus 171 ~vi~I~Gmg-GvGKTTLa~~v~~~ 193 (857)
+.+=|.|-| ||||||++-.+..-
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~a 25 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQA 25 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHH
T ss_pred ceEEEEECCCCccHHHHHHHHHHH
Confidence 567899999 99999998887764
No 252
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=82.17 E-value=0.32 Score=44.34 Aligned_cols=22 Identities=32% Similarity=0.466 Sum_probs=19.7
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.+|+|+|..+.|||||+.++..
T Consensus 6 p~IaIiGh~d~GKSTL~~~L~~ 27 (227)
T d1g7sa4 6 PIVSVLGHVDHGKTTLLDHIRG 27 (227)
T ss_dssp CEEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEEeCCCccHHHHHHHHHh
Confidence 4699999999999999998865
No 253
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=82.16 E-value=0.54 Score=45.28 Aligned_cols=25 Identities=24% Similarity=0.481 Sum_probs=22.0
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.+-.|.|=|.=|+||||+++.+.+.
T Consensus 5 ~~~rI~iEG~iGsGKSTl~~~L~~~ 29 (333)
T d1p6xa_ 5 TIVRIYLDGVYGIGKSTTGRVMASA 29 (333)
T ss_dssp EEEEEEEECSTTSSHHHHHHHHHSG
T ss_pred ceEEEEEECCccCCHHHHHHHHHHH
Confidence 3567889999999999999999884
No 254
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=82.02 E-value=0.24 Score=42.61 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=22.0
Q ss_pred CCceEEEccCCCCCC-----cchhhhCCCCCCcEEeEcCC
Q 003013 387 CRLRFLELSYCQGLT-----KLPQALLTLCSLTDMKILGC 421 (857)
Q Consensus 387 ~~L~~L~L~~~~~l~-----~lp~~~~~l~~L~~L~l~~~ 421 (857)
++|++|+|+++..+. .+-..+...++|++|++++|
T Consensus 17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n 56 (166)
T d1io0a_ 17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGT 56 (166)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTS
T ss_pred CCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCC
Confidence 677777777654332 23345566677777777776
No 255
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=81.29 E-value=0.41 Score=46.33 Aligned_cols=24 Identities=21% Similarity=0.267 Sum_probs=21.9
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
+++=|+|+|..|-|||||+..+..
T Consensus 16 ~IRNI~iiGhvd~GKTTL~d~Ll~ 39 (341)
T d1n0ua2 16 NVRNMSVIAHVDHGKSTLTDSLVQ 39 (341)
T ss_dssp GEEEEEEECCGGGTHHHHHHHHHH
T ss_pred cCcEEEEEeCCCCcHHHHHHHHHH
Confidence 789999999999999999998754
No 256
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=81.03 E-value=0.89 Score=42.08 Aligned_cols=53 Identities=21% Similarity=0.189 Sum_probs=39.4
Q ss_pred CceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeCCCCCHHHHHHHHHHHccCC
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVSEDFDVFGVSKFILNSIAKD 228 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs~~~~~~~i~~~i~~~l~~~ 228 (857)
.-+++-|+|..|+||||+|-++....+... ..++|+..-..++... ++.++.+
T Consensus 53 ~g~itei~G~~gsGKTtl~l~~~~~~q~~g--~~~vyidtE~~~~~~~-----a~~~Gvd 105 (263)
T d1u94a1 53 MGRIVEIYGPESSGKTTLTLQVIAAAQREG--KTCAFIDAEHALDPIY-----ARKLGVD 105 (263)
T ss_dssp TTSEEEEECSTTSSHHHHHHHHHHHHHHTT--CCEEEEESSCCCCHHH-----HHHTTCC
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHHHcCC--CEEEEEccccccCHHH-----HHHhCCC
Confidence 447999999999999999999888654433 3578888877887643 4555544
No 257
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=80.46 E-value=0.92 Score=44.29 Aligned_cols=35 Identities=26% Similarity=0.223 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhc
Q 003013 149 EKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 149 ~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
++.+..+...+ .-++.-|.|.+|.||||++..+..
T Consensus 151 ~~Q~~A~~~al---------~~~~~vI~G~pGTGKTt~i~~~l~ 185 (359)
T d1w36d1 151 NWQKVAAAVAL---------TRRISVISGGPGTGKTTTVAKLLA 185 (359)
T ss_dssp CHHHHHHHHHH---------TBSEEEEECCTTSTHHHHHHHHHH
T ss_pred cHHHHHHHHHH---------cCCeEEEEcCCCCCceehHHHHHH
Confidence 55666666666 236888999999999999876544
No 258
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=80.31 E-value=0.4 Score=42.79 Aligned_cols=19 Identities=32% Similarity=0.378 Sum_probs=17.8
Q ss_pred EEEeccCCcchHHHHHHHh
Q 003013 173 ISINGMAGVGKTTLAQLVY 191 (857)
Q Consensus 173 i~I~GmgGvGKTTLa~~v~ 191 (857)
|+|+|.++.|||||+.++.
T Consensus 6 i~iiGhvd~GKSTL~~~Ll 24 (204)
T d2c78a3 6 VGTIGHVDHGKTTLTAALT 24 (204)
T ss_dssp EEEECSTTSSHHHHHHHHH
T ss_pred EEEEeCCCCcHHHHHHHHH
Confidence 8999999999999999885
No 259
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=79.81 E-value=0.41 Score=45.15 Aligned_cols=22 Identities=27% Similarity=0.312 Sum_probs=18.6
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.+.-|+|.+|+||||+|-++.-
T Consensus 30 ~~~~i~G~~G~GKS~l~l~la~ 51 (274)
T d1nlfa_ 30 TVGALVSPGGAGKSMLALQLAA 51 (274)
T ss_dssp SEEEEEESTTSSHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHH
Confidence 4667999999999999987754
No 260
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=78.47 E-value=0.52 Score=43.54 Aligned_cols=25 Identities=28% Similarity=0.371 Sum_probs=21.9
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.-.++-|.|.+|+||||+|.++.-+
T Consensus 33 ~G~l~~i~G~~G~GKT~~~l~~a~~ 57 (258)
T d2i1qa2 33 SQSVTEFAGVFGSGKTQIMHQSCVN 57 (258)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHH
Confidence 4479999999999999999998654
No 261
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.46 E-value=1 Score=42.01 Aligned_cols=26 Identities=23% Similarity=0.351 Sum_probs=23.7
Q ss_pred CCceEEEEeccCCcchHHHHHHHhcc
Q 003013 168 DGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 168 ~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+.+.||+|+|.-+.||+||+..++..
T Consensus 30 ~~v~vvsi~G~~~sGKS~llN~l~~~ 55 (277)
T d1f5na2 30 QPMVVVAIVGLYRTGKSYLMNKLAGK 55 (277)
T ss_dssp SBEEEEEEEEBTTSSHHHHHHHHTTC
T ss_pred CCEEEEEEECCCCCCHHHHHHHHcCC
Confidence 37999999999999999999999874
No 262
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=77.25 E-value=0.56 Score=40.75 Aligned_cols=21 Identities=33% Similarity=0.453 Sum_probs=19.2
Q ss_pred EEEEeccCCcchHHHHHHHhc
Q 003013 172 VISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~ 192 (857)
-|+|+|..+.|||||..++-.
T Consensus 7 nIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 599999999999999998864
No 263
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=76.27 E-value=0.58 Score=44.08 Aligned_cols=22 Identities=32% Similarity=0.430 Sum_probs=19.7
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.|||+|++.+|||||-.++=+.
T Consensus 4 ~~GivG~Pn~GKSTlf~~lt~~ 25 (278)
T d1jala1 4 KCGIVGLPNVGKSTLFNALTKA 25 (278)
T ss_dssp EEEEECCTTSSHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHCC
Confidence 5899999999999999988764
No 264
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=75.73 E-value=1.4 Score=41.27 Aligned_cols=56 Identities=13% Similarity=-0.006 Sum_probs=35.8
Q ss_pred ceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeCCCCCHHHHHHHHHHHccCC
Q 003013 170 FSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVSEDFDVFGVSKFILNSIAKD 228 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs~~~~~~~i~~~i~~~l~~~ 228 (857)
-.++-|.|..|+||||+|.++.-+......+ .++++ |-..+...+...++......
T Consensus 35 G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~-~v~~~--s~E~~~~~~~~r~~~~~~~~ 90 (277)
T d1cr2a_ 35 GEVIMVTSGSGMGKSTFVRQQALQWGTAMGK-KVGLA--MLEESVEETAEDLIGLHNRV 90 (277)
T ss_dssp TCEEEEECSTTSSHHHHHHHHHHHHHHTSCC-CEEEE--ESSSCHHHHHHHHHHHHTTC
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHhhhhhccc-ceeEe--eeccchhhHHhHHHHHhhcC
Confidence 3578899999999999998886532222233 23333 34456677777776655543
No 265
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=75.70 E-value=0.86 Score=43.72 Aligned_cols=24 Identities=33% Similarity=0.461 Sum_probs=20.9
Q ss_pred ceEEEEeccCCcchHHHHHHHhcc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+-.|.|=|.=|+||||+++.+.+.
T Consensus 5 ~lrI~IEG~iGsGKSTl~~~L~~~ 28 (331)
T d1osna_ 5 VLRIYLDGAYGIGKTTAAEEFLHH 28 (331)
T ss_dssp EEEEEEEESSSSCTTHHHHHHHHT
T ss_pred ceEEEEECCCCCCHHHHHHHHHHH
Confidence 345899999999999999999874
No 266
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=75.19 E-value=0.64 Score=44.52 Aligned_cols=25 Identities=36% Similarity=0.441 Sum_probs=20.9
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
.+-.|.|=|.=|+||||+++.+.+.
T Consensus 3 ~~lrI~IEG~iGsGKTTl~~~La~~ 27 (329)
T d1e2ka_ 3 TLLRVYIDGPHGMGKTTTTQLLVAL 27 (329)
T ss_dssp EEEEEEECSCTTSSHHHHHHHHTC-
T ss_pred CceEEEEECCcCCCHHHHHHHHHHH
Confidence 3456999999999999999998763
No 267
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=74.73 E-value=0.7 Score=42.19 Aligned_cols=24 Identities=29% Similarity=0.391 Sum_probs=20.1
Q ss_pred CceEEEEeccCCcchHHHHHH-Hhc
Q 003013 169 GFSVISINGMAGVGKTTLAQL-VYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~-v~~ 192 (857)
.-+++-|+|..|+||||+|.+ +++
T Consensus 25 ~G~~~~I~G~~G~GKT~la~~~~~~ 49 (242)
T d1tf7a1 25 IGRSTLVSGTSGTGKTLFSIQFLYN 49 (242)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHH
Confidence 457999999999999999966 444
No 268
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=73.28 E-value=0.82 Score=43.90 Aligned_cols=21 Identities=29% Similarity=0.428 Sum_probs=19.3
Q ss_pred EEEEeccCCcchHHHHHHHhc
Q 003013 172 VISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~ 192 (857)
-|-|.|..|.||||+++++..
T Consensus 168 nili~G~tgSGKTT~l~al~~ 188 (323)
T d1g6oa_ 168 NVIVCGGTGSGKTTYIKSIME 188 (323)
T ss_dssp CEEEEESTTSSHHHHHHHHGG
T ss_pred CEEEEeeccccchHHHHHHhh
Confidence 478999999999999999987
No 269
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=73.20 E-value=0.96 Score=42.69 Aligned_cols=21 Identities=29% Similarity=0.463 Sum_probs=18.6
Q ss_pred eEEEEeccCCcchHHHHHHHh
Q 003013 171 SVISINGMAGVGKTTLAQLVY 191 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~ 191 (857)
.+-.|+|.-|.||||+..+|+
T Consensus 24 ~ln~IvG~NGsGKStiL~Ai~ 44 (292)
T g1f2t.1 24 GINLIIGQNGSGKSSLLDAIL 44 (292)
T ss_dssp EEEEEECCTTSSHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHH
Confidence 466899999999999999875
No 270
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=73.11 E-value=0.76 Score=43.71 Aligned_cols=22 Identities=32% Similarity=0.474 Sum_probs=19.9
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
-|||+|.+.+|||||-.++-+.
T Consensus 12 kiGivG~Pn~GKSTlfnalT~~ 33 (296)
T d1ni3a1 12 KTGIVGMPNVGKSTFFRAITKS 33 (296)
T ss_dssp EEEEEECSSSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
Confidence 4999999999999999999764
No 271
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=71.61 E-value=0.95 Score=39.80 Aligned_cols=19 Identities=32% Similarity=0.401 Sum_probs=17.5
Q ss_pred EEEeccCCcchHHHHHHHh
Q 003013 173 ISINGMAGVGKTTLAQLVY 191 (857)
Q Consensus 173 i~I~GmgGvGKTTLa~~v~ 191 (857)
|+|.|..+.|||||+.++-
T Consensus 6 i~iiGHvd~GKSTL~~~l~ 24 (196)
T d1d2ea3 6 VGTIGHVDHGKTTLTAAIT 24 (196)
T ss_dssp EEEESSTTSSHHHHHHHHH
T ss_pred EEEEeCCCCcHHHHHHHHH
Confidence 8999999999999999774
No 272
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=70.97 E-value=1 Score=38.39 Aligned_cols=22 Identities=32% Similarity=0.366 Sum_probs=19.0
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.-|.|.|..|+||||+|-....
T Consensus 15 ~gvl~~G~sG~GKStlal~l~~ 36 (176)
T d1kkma_ 15 LGVLITGDSGVGKSETALELVQ 36 (176)
T ss_dssp EEEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEEEeCCCCCHHHHHHHHHH
Confidence 4578999999999999988665
No 273
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=69.91 E-value=1.9 Score=37.43 Aligned_cols=36 Identities=14% Similarity=0.146 Sum_probs=27.2
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhc
Q 003013 152 KEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 152 ~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
...+..+|... .+-.-|-|||.++.|||++|..+.+
T Consensus 40 l~~l~~~l~~~-----PKkn~i~~~GP~~TGKS~f~~sl~~ 75 (205)
T d1tuea_ 40 LGALKSFLKGT-----PKKNCLVFCGPANTGKSYFGMSFIH 75 (205)
T ss_dssp HHHHHHHHHTC-----TTCSEEEEESCGGGCHHHHHHHHHH
T ss_pred HHHHHHHHcCC-----CCceEEEEECCCCccHHHHHHHHHH
Confidence 34455556432 3668999999999999999998766
No 274
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=69.77 E-value=1.4 Score=40.92 Aligned_cols=40 Identities=20% Similarity=0.132 Sum_probs=29.5
Q ss_pred eEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeCCCC
Q 003013 171 SVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVSEDF 212 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs~~~ 212 (857)
..++|.|-.|+|||+|++.+-.. .+.+-+.++++-+.+..
T Consensus 68 Qr~~Ifg~~g~GKt~l~~~~~~~--~~~~~~v~V~~~iGer~ 107 (276)
T d1fx0a3 68 QRELIIGDRQTGKTAVATDTILN--QQGQNVICVYVAIGQKA 107 (276)
T ss_dssp CBCBEEESSSSSHHHHHHHHHHT--CCTTTCEEEEEEESCCH
T ss_pred ceEeeccCCCCChHHHHHHHHhh--hcccCceeeeeeecchh
Confidence 46899999999999999875442 23344677888887754
No 275
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=69.38 E-value=1.2 Score=37.98 Aligned_cols=22 Identities=27% Similarity=0.412 Sum_probs=18.8
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.-|-|.|..|+||||+|-....
T Consensus 16 ~gvli~G~sG~GKS~lal~l~~ 37 (177)
T d1knxa2 16 VGVLLTGRSGIGKSECALDLIN 37 (177)
T ss_dssp EEEEEEESSSSSHHHHHHHHHT
T ss_pred EEEEEEcCCCCCHHHHHHHHHH
Confidence 4578899999999999988765
No 276
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=69.32 E-value=0.59 Score=42.03 Aligned_cols=22 Identities=27% Similarity=0.514 Sum_probs=18.5
Q ss_pred EEEEeccCCcchHHHHHHHhcc
Q 003013 172 VISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+..++|..|||||||..++..+
T Consensus 99 ~~vl~G~SGVGKSSLiN~L~~~ 120 (231)
T d1t9ha2 99 TTVFAGQSGVGKSSLLNAISPE 120 (231)
T ss_dssp EEEEEESHHHHHHHHHHHHCC-
T ss_pred eEEEECCCCccHHHHHHhhccH
Confidence 4458899999999999998764
No 277
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=67.91 E-value=2.5 Score=38.97 Aligned_cols=25 Identities=28% Similarity=0.311 Sum_probs=22.0
Q ss_pred CCceEEEEeccCCcchHHHHHHHhc
Q 003013 168 DGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 168 ~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.+-..+-++|.|+.||||++..+..
T Consensus 102 ~k~n~~~l~G~~~tGKS~f~~~i~~ 126 (267)
T d1u0ja_ 102 GKRNTIWLFGPATTGKTNIAEAIAH 126 (267)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHH
T ss_pred CccEEEEEEcCCCCCHHHHHHHHHH
Confidence 3677899999999999999998866
No 278
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=67.61 E-value=0.55 Score=41.89 Aligned_cols=21 Identities=29% Similarity=0.436 Sum_probs=17.6
Q ss_pred EEEEeccCCcchHHHHHHHhc
Q 003013 172 VISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~ 192 (857)
+..|+|..|.||||+..+|.-
T Consensus 26 ~tvi~G~NGsGKStil~Ai~~ 46 (222)
T d1qhla_ 26 VTTLSGGNGAGKSTTMAAFVT 46 (222)
T ss_dssp HHHHHSCCSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHH
Confidence 445789999999999999864
No 279
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=67.48 E-value=1.3 Score=40.00 Aligned_cols=21 Identities=24% Similarity=0.270 Sum_probs=18.3
Q ss_pred EEEEeccCCcchHHHHHHHhc
Q 003013 172 VISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~ 192 (857)
-|+|.|..+-|||||+.++.-
T Consensus 5 Ni~viGHVd~GKTTL~~~Ll~ 25 (224)
T d1jnya3 5 NLIVIGHVDHGKSTLVGRLLM 25 (224)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHH
Confidence 389999999999999987743
No 280
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=66.52 E-value=1.4 Score=41.05 Aligned_cols=25 Identities=28% Similarity=0.279 Sum_probs=22.0
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
..-.|+|+||+.|||+||+..+.+.
T Consensus 111 ~~~~v~vvG~PNvGKSsliN~L~~~ 135 (273)
T d1puja_ 111 RAIRALIIGIPNVGKSTLINRLAKK 135 (273)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHTS
T ss_pred CceEEEEEecCccchhhhhhhhhcc
Confidence 4456999999999999999999874
No 281
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=66.38 E-value=1.5 Score=37.22 Aligned_cols=22 Identities=27% Similarity=0.386 Sum_probs=18.7
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.-|-|.|..|+||||+|-....
T Consensus 16 ~gvli~G~sg~GKS~la~~l~~ 37 (169)
T d1ko7a2 16 VGVLITGDSGIGKSETALELIK 37 (169)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEEeCCCCCHHHHHHHHHH
Confidence 4578999999999999987665
No 282
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=65.87 E-value=1.6 Score=39.07 Aligned_cols=25 Identities=20% Similarity=0.165 Sum_probs=21.0
Q ss_pred CCceEEEEeccCCcchHHHHHHHhc
Q 003013 168 DGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 168 ~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.++--|+|+|..+.|||||+.++..
T Consensus 7 ~~~~~i~viGHVd~GKSTL~~~Ll~ 31 (222)
T d1zunb3 7 KEMLRFLTCGNVDDGKSTLIGRLLH 31 (222)
T ss_dssp CEEEEEEEECCTTSSHHHHHHHHHH
T ss_pred CCcceEEEEcCCCCCHHHHHHHHHH
Confidence 3555689999999999999998854
No 283
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=65.04 E-value=1.4 Score=42.26 Aligned_cols=21 Identities=29% Similarity=0.309 Sum_probs=18.6
Q ss_pred EEEeccCCcchHHHHHHHhcc
Q 003013 173 ISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 173 i~I~GmgGvGKTTLa~~v~~~ 193 (857)
|||+|.+.+|||||-.++=+.
T Consensus 3 v~lvG~pn~GKStlfn~lt~~ 23 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATLV 23 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC-
T ss_pred EeEECCCCCCHHHHHHHHHCC
Confidence 899999999999999988663
No 284
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=65.00 E-value=1.7 Score=43.05 Aligned_cols=23 Identities=17% Similarity=0.410 Sum_probs=20.3
Q ss_pred ceEEEEeccCCcchHHHHHHHhc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.--|+|+|..|+|||||...+..
T Consensus 56 ~l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 56 VLNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHT
T ss_pred CcEEEEECCCCCCHHHHHHHHhC
Confidence 34589999999999999999875
No 285
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=64.66 E-value=1.7 Score=42.25 Aligned_cols=21 Identities=29% Similarity=0.463 Sum_probs=18.2
Q ss_pred eEEEEeccCCcchHHHHHHHh
Q 003013 171 SVISINGMAGVGKTTLAQLVY 191 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~ 191 (857)
.+..|+|.-|.||||+..+|+
T Consensus 24 ~~~vi~G~NgsGKTtileAI~ 44 (369)
T g1ii8.1 24 GINLIIGQNGSGKSSLLDAIL 44 (369)
T ss_dssp EEEEEECCTTSSHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHH
Confidence 466689999999999999884
No 286
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=63.47 E-value=1.7 Score=38.02 Aligned_cols=21 Identities=33% Similarity=0.414 Sum_probs=18.4
Q ss_pred EEEEeccCCcchHHHHHHHhc
Q 003013 172 VISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~ 192 (857)
-|||.|-.+.|||||+.++-.
T Consensus 7 nIaiiGhvd~GKSTL~~~L~g 27 (195)
T d1kk1a3 7 NIGMVGHVDHGKTTLTKALTG 27 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEEeccCCcHHHHHHHHHh
Confidence 479999999999999999843
No 287
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=60.95 E-value=2.8 Score=31.49 Aligned_cols=25 Identities=24% Similarity=0.490 Sum_probs=21.5
Q ss_pred CCceEEEEeccCCcchHHHHHHHhc
Q 003013 168 DGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 168 ~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
+..+-|=+.|.||+|.+.||+...+
T Consensus 6 ~~~~~ihfiGigG~GMs~LA~~L~~ 30 (96)
T d1p3da1 6 RRVQQIHFIGIGGAGMSGIAEILLN 30 (96)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHH
T ss_pred hhCCEEEEEEECHHHHHHHHHHHHh
Confidence 3567788999999999999998766
No 288
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=60.43 E-value=1.9 Score=41.46 Aligned_cols=21 Identities=24% Similarity=0.507 Sum_probs=18.6
Q ss_pred eEEEEeccCCcchHHHHHHHh
Q 003013 171 SVISINGMAGVGKTTLAQLVY 191 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~ 191 (857)
.+-.|+|.-|+||||+..+|.
T Consensus 27 ~lnvi~G~NGsGKS~il~AI~ 47 (329)
T g1xew.1 27 GFTAIVGANGSGKSNIGDAIL 47 (329)
T ss_dssp SEEEEEECTTSSSHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHH
Confidence 467899999999999999874
No 289
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=59.71 E-value=2.2 Score=37.67 Aligned_cols=21 Identities=38% Similarity=0.455 Sum_probs=18.8
Q ss_pred EEEEeccCCcchHHHHHHHhc
Q 003013 172 VISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~ 192 (857)
-|+|+|-..-|||||+.++-.
T Consensus 10 ni~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 10 NIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp EEEEECSTTSSHHHHHHHHHS
T ss_pred EEEEEEccCCcHHHHHHHHHh
Confidence 599999999999999998854
No 290
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=57.97 E-value=1.9 Score=39.34 Aligned_cols=21 Identities=33% Similarity=0.436 Sum_probs=18.6
Q ss_pred eE-EEEeccCCcchHHHHHHHh
Q 003013 171 SV-ISINGMAGVGKTTLAQLVY 191 (857)
Q Consensus 171 ~v-i~I~GmgGvGKTTLa~~v~ 191 (857)
.+ |+|.|..+.|||||+.++.
T Consensus 24 ~iNi~iiGHVD~GKSTL~~~Ll 45 (245)
T d1r5ba3 24 HVNIVFIGHVDAGKSTLGGNIL 45 (245)
T ss_dssp EEEEEEEECGGGTHHHHHHHHH
T ss_pred ceEEEEEeeCCCCHHHHHHHHH
Confidence 44 9999999999999999874
No 291
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=57.54 E-value=2.5 Score=38.32 Aligned_cols=21 Identities=19% Similarity=0.233 Sum_probs=18.8
Q ss_pred EEEEeccCCcchHHHHHHHhc
Q 003013 172 VISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~~ 192 (857)
-|+|.|..+-|||||+.++.-
T Consensus 8 Ni~iiGHvD~GKsTl~~~ll~ 28 (239)
T d1f60a3 8 NVVVIGHVDSGKSTTTGHLIY 28 (239)
T ss_dssp EEEEEECTTSCHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHH
Confidence 689999999999999988754
No 292
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=56.67 E-value=4.7 Score=37.29 Aligned_cols=65 Identities=14% Similarity=0.099 Sum_probs=40.0
Q ss_pred HHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcccc-hhccCC-----ceEEEEeCCCCC-HHHHHHHHHH
Q 003013 154 EIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYNDDR-VQRHYE-----IKAWTCVSEDFD-VFGVSKFILN 223 (857)
Q Consensus 154 ~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~~~-~~~~Fd-----~~~wv~vs~~~~-~~~i~~~i~~ 223 (857)
++++.|.-=. .-..++|.|-.|+|||+|+..+.+... ....-+ .++++-+.+... +.++.+...+
T Consensus 57 raID~l~pig-----~GQr~~If~~~g~GKt~ll~~~~~~~~~~~~~~~~~~~~~~v~~~IGer~~E~~e~~~~~~~ 128 (285)
T d2jdia3 57 KAVDSLVPIG-----RGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTD 128 (285)
T ss_dssp HHHHHHSCCB-----TTCBCEEEESTTSSHHHHHHHHHHHTHHHHTSSCTTTCCEEEEEEESCCHHHHHHHHHHHHH
T ss_pred eEEecccCcc-----CCCEEEeecCCCCChHHHHHHHHHhHHhhccccccccceEEEEeeeCccHHHHHHHHHHhcc
Confidence 6677775321 446789999999999999887655322 122222 356777777653 4455555443
No 293
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=55.89 E-value=7.6 Score=31.04 Aligned_cols=37 Identities=22% Similarity=0.266 Sum_probs=25.9
Q ss_pred CceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeCCC
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVSED 211 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs~~ 211 (857)
+-++.-|++.-|.|||+++-....+ ...++.+.+...
T Consensus 7 ~~~~~ll~apTGsGKT~~~~~~~~~------~~~~vli~~P~~ 43 (136)
T d1a1va1 7 SFQVAHLHAPTGSGKSTKVPAAYAA------QGYKVLVLNPSV 43 (136)
T ss_dssp SCEEEEEECCTTSCTTTHHHHHHHT------TTCCEEEEESCH
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHH------cCCcEEEEcChH
Confidence 4467778899999999998665442 344677776553
No 294
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=54.62 E-value=5.8 Score=39.03 Aligned_cols=39 Identities=21% Similarity=0.346 Sum_probs=28.4
Q ss_pred cch-hHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhc
Q 003013 147 GRE-KEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 147 G~~-~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
|.. ...+.+.+++ .. .-.+|-|.|.-|.||||.+..+.+
T Consensus 141 G~~~~~~~~l~~l~-~~------~~GliLvtGpTGSGKSTTl~~~l~ 180 (401)
T d1p9ra_ 141 GMTAHNHDNFRRLI-KR------PHGIILVTGPTGSGKSTTLYAGLQ 180 (401)
T ss_dssp CCCHHHHHHHHHHH-TS------SSEEEEEECSTTSCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHH-hh------hhceEEEEcCCCCCccHHHHHHhh
Confidence 554 4444555555 33 348999999999999999998877
No 295
>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=51.67 E-value=3.8 Score=35.39 Aligned_cols=31 Identities=16% Similarity=0.162 Sum_probs=22.6
Q ss_pred ceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEe
Q 003013 170 FSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCV 208 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~v 208 (857)
-..|||+|+|.+||. +|+..- .|...+.+.-
T Consensus 44 ~~~vgiiG~G~IG~~-va~~l~-------~fg~~v~~~d 74 (188)
T d1sc6a1 44 GKKLGIIGYGHIGTQ-LGILAE-------SLGMYVYFYD 74 (188)
T ss_dssp TCEEEEECCSHHHHH-HHHHHH-------HTTCEEEEEC
T ss_pred ceEEEEeecccchhh-hhhhcc-------cccceEeecc
Confidence 368999999999995 666543 3777766553
No 296
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=50.31 E-value=2.4 Score=40.06 Aligned_cols=15 Identities=33% Similarity=0.335 Sum_probs=12.8
Q ss_pred EEEeccCCcchHHHH
Q 003013 173 ISINGMAGVGKTTLA 187 (857)
Q Consensus 173 i~I~GmgGvGKTTLa 187 (857)
+-|.|.+|.||||.+
T Consensus 17 ~lI~g~aGTGKTt~l 31 (306)
T d1uaaa1 17 CLVLAGAGSGKTRVI 31 (306)
T ss_dssp EEECCCTTSCHHHHH
T ss_pred EEEEeeCCccHHHHH
Confidence 568899999999764
No 297
>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}
Probab=49.24 E-value=4.3 Score=35.28 Aligned_cols=29 Identities=21% Similarity=0.398 Sum_probs=21.2
Q ss_pred eEEEEeccCCcchHHHHHHHhcccchhccCCceEEEE
Q 003013 171 SVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTC 207 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~ 207 (857)
+.|||+|+|.|||.. |+.. +.|...+.++
T Consensus 44 k~vgIiG~G~IG~~v-a~~l-------~~fg~~V~~~ 72 (197)
T d1j4aa1 44 QVVGVVGTGHIGQVF-MQIM-------EGFGAKVITY 72 (197)
T ss_dssp SEEEEECCSHHHHHH-HHHH-------HHTTCEEEEE
T ss_pred CeEEEecccccchhH-HHhH-------hhhccccccc
Confidence 689999999999854 5543 2388777655
No 298
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=48.61 E-value=3.7 Score=38.99 Aligned_cols=16 Identities=38% Similarity=0.422 Sum_probs=13.1
Q ss_pred EEEeccCCcchHHHHH
Q 003013 173 ISINGMAGVGKTTLAQ 188 (857)
Q Consensus 173 i~I~GmgGvGKTTLa~ 188 (857)
+-|.|.+|.||||.+-
T Consensus 27 ~lV~g~aGSGKTt~l~ 42 (318)
T d1pjra1 27 LLIMAGAGSGKTRVLT 42 (318)
T ss_dssp EEEEECTTSCHHHHHH
T ss_pred EEEEecCCccHHHHHH
Confidence 5588999999998754
No 299
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=43.59 E-value=6 Score=36.75 Aligned_cols=18 Identities=44% Similarity=0.685 Sum_probs=15.1
Q ss_pred eEEEEeccCCcchHHHHH
Q 003013 171 SVISINGMAGVGKTTLAQ 188 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~ 188 (857)
.|--+.|..|.|||||..
T Consensus 15 ~~alfFGLSGTGKTTLs~ 32 (313)
T d2olra1 15 DVAVFFGLSGTGKTTLST 32 (313)
T ss_dssp CEEEEECSTTSSHHHHHC
T ss_pred CEEEEEccCCCCccccee
Confidence 355699999999999984
No 300
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=43.09 E-value=5 Score=37.77 Aligned_cols=21 Identities=29% Similarity=0.469 Sum_probs=18.4
Q ss_pred eEEEEeccCCcchHHHHHHHh
Q 003013 171 SVISINGMAGVGKTTLAQLVY 191 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~ 191 (857)
.+-.|+|.-|.||||+.+++.
T Consensus 25 ~lnvlvG~NgsGKS~iL~Ai~ 45 (308)
T d1e69a_ 25 RVTAIVGPNGSGKSNIIDAIK 45 (308)
T ss_dssp SEEEEECCTTTCSTHHHHHHH
T ss_pred CeEEEECCCCCcHHHHHHHHH
Confidence 366899999999999999884
No 301
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=42.91 E-value=21 Score=31.58 Aligned_cols=40 Identities=15% Similarity=0.081 Sum_probs=29.2
Q ss_pred cchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhc
Q 003013 147 GREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 147 G~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
......++|.+.+..+ .....-++|-.|.|||-.|-...-
T Consensus 59 ~Q~~~~~~i~~~~~~~------~~~~~LL~GdvGsGKT~V~~~a~~ 98 (233)
T d2eyqa3 59 DQAQAINAVLSDMCQP------LAMDRLVCGDVGFGKTEVAMRAAF 98 (233)
T ss_dssp HHHHHHHHHHHHHHSS------SCCEEEEECCCCTTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcc------CccCeEEEcCCCCCcHHHHHHHHH
Confidence 3455667777777543 556778999999999999876544
No 302
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=42.18 E-value=6 Score=36.90 Aligned_cols=18 Identities=44% Similarity=0.685 Sum_probs=15.5
Q ss_pred eEEEEeccCCcchHHHHH
Q 003013 171 SVISINGMAGVGKTTLAQ 188 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~ 188 (857)
.|--..|..|.|||||..
T Consensus 15 ~valffGLSGTGKTTLs~ 32 (318)
T d1j3ba1 15 DVAVFFGLSGTGKTTLST 32 (318)
T ss_dssp CEEEEEECTTSCHHHHTC
T ss_pred CEEEEEccCCCCcccccc
Confidence 466889999999999974
No 303
>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=40.95 E-value=7.5 Score=33.20 Aligned_cols=31 Identities=13% Similarity=0.223 Sum_probs=22.3
Q ss_pred ceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEe
Q 003013 170 FSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCV 208 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~v 208 (857)
-+.|||+|+|++||- +|+.. +.|...++++-
T Consensus 44 ~k~vgiiG~G~IG~~-va~~~-------~~fg~~v~~~d 74 (184)
T d1ygya1 44 GKTVGVVGLGRIGQL-VAQRI-------AAFGAYVVAYD 74 (184)
T ss_dssp TCEEEEECCSHHHHH-HHHHH-------HTTTCEEEEEC
T ss_pred ceeeeeccccchhHH-HHHHh-------hhccceEEeec
Confidence 368999999999984 44433 34888777654
No 304
>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}
Probab=40.50 E-value=13 Score=31.83 Aligned_cols=33 Identities=3% Similarity=0.044 Sum_probs=22.6
Q ss_pred CceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeC
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVS 209 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs 209 (857)
.-..|||+|+|.+|| .+|+..- .|...+..+..
T Consensus 43 ~~~~vgiiG~G~IG~-~va~~l~-------~fg~~v~~~d~ 75 (188)
T d2naca1 43 EAMHVGTVAAGRIGL-AVLRRLA-------PFDVHLHYTDR 75 (188)
T ss_dssp TTCEEEEECCSHHHH-HHHHHHG-------GGTCEEEEECS
T ss_pred cccceeeccccccch-hhhhhhh-------ccCceEEEEee
Confidence 346999999999997 4555443 37766655543
No 305
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=39.58 E-value=6.6 Score=28.78 Aligned_cols=20 Identities=25% Similarity=0.567 Sum_probs=17.4
Q ss_pred EEEeccCCcchHHHHHHHhc
Q 003013 173 ISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 173 i~I~GmgGvGKTTLa~~v~~ 192 (857)
|=++|.||+|.+-||+.+.+
T Consensus 4 ihfiGIgG~GMs~LA~~L~~ 23 (89)
T d1j6ua1 4 IHFVGIGGIGMSAVALHEFS 23 (89)
T ss_dssp EEEETTTSHHHHHHHHHHHH
T ss_pred EEEEeECHHHHHHHHHHHHh
Confidence 55779999999999998766
No 306
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=38.68 E-value=7.9 Score=36.10 Aligned_cols=17 Identities=47% Similarity=0.716 Sum_probs=14.5
Q ss_pred EEEEeccCCcchHHHHH
Q 003013 172 VISINGMAGVGKTTLAQ 188 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~ 188 (857)
|-.+.|..|.|||||..
T Consensus 16 ~alfFGLSGTGKTTLs~ 32 (323)
T d1ii2a1 16 VTVFFGLSGTGKTTLSA 32 (323)
T ss_dssp EEEEECCTTSSHHHHHC
T ss_pred EEEEEccCCCCccccee
Confidence 44599999999999984
No 307
>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}
Probab=38.05 E-value=16 Score=31.24 Aligned_cols=31 Identities=13% Similarity=0.239 Sum_probs=21.3
Q ss_pred ceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEe
Q 003013 170 FSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCV 208 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~v 208 (857)
-+.|||+|+|.||+.. |+.... |...+-++-
T Consensus 47 g~tvgIiG~G~IG~~v-a~~l~~-------fg~~v~~~d 77 (191)
T d1gdha1 47 NKTLGIYGFGSIGQAL-AKRAQG-------FDMDIDYFD 77 (191)
T ss_dssp TCEEEEECCSHHHHHH-HHHHHT-------TTCEEEEEC
T ss_pred ccceEEeecccchHHH-HHHHHh-------hcccccccc
Confidence 4789999999999654 554433 766665543
No 308
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=37.89 E-value=7.2 Score=38.84 Aligned_cols=22 Identities=27% Similarity=0.448 Sum_probs=18.3
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
+-+.|+|..|.|||++++.+..
T Consensus 51 ~H~~I~G~tGsGKT~~l~~li~ 72 (433)
T d1e9ra_ 51 RHLLVNGATGTGKSVLLRELAY 72 (433)
T ss_dssp GCEEEEECTTSSHHHHHHHHHH
T ss_pred ceEEEEeCCCCcHHHHHHHHHH
Confidence 4579999999999999876554
No 309
>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}
Probab=36.92 E-value=9.2 Score=31.59 Aligned_cols=20 Identities=15% Similarity=0.390 Sum_probs=16.8
Q ss_pred eEEEEeccCCcchHHHHHHH
Q 003013 171 SVISINGMAGVGKTTLAQLV 190 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v 190 (857)
--|||+|.||+|...+.+.+
T Consensus 5 irvaIIGaG~ig~~~~~~~l 24 (157)
T d1nvmb1 5 LKVAIIGSGNIGTDLMIKVL 24 (157)
T ss_dssp EEEEEECCSHHHHHHHHHHH
T ss_pred cEEEEEcCcHHHHHHHHHHH
Confidence 35899999999998887765
No 310
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=36.87 E-value=5.4 Score=29.55 Aligned_cols=21 Identities=14% Similarity=0.240 Sum_probs=16.9
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
+.|.|+|+|+.|.++ |+...+
T Consensus 6 K~v~ViGlG~sG~s~-a~~L~~ 26 (93)
T d2jfga1 6 KNVVIIGLGLTGLSC-VDFFLA 26 (93)
T ss_dssp CCEEEECCSHHHHHH-HHHHHH
T ss_pred CEEEEEeECHHHHHH-HHHHHH
Confidence 458999999999986 776666
No 311
>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}
Probab=36.56 E-value=8.9 Score=33.21 Aligned_cols=29 Identities=14% Similarity=0.356 Sum_probs=21.0
Q ss_pred eEEEEeccCCcchHHHHHHHhcccchhccCCceEEEE
Q 003013 171 SVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTC 207 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~ 207 (857)
+.|||+|+|.||| .+|+.. +.|...+.++
T Consensus 46 ktvgIiG~G~IG~-~va~~l-------~~fg~~v~~~ 74 (199)
T d1dxya1 46 QTVGVMGTGHIGQ-VAIKLF-------KGFGAKVIAY 74 (199)
T ss_dssp SEEEEECCSHHHH-HHHHHH-------HHTTCEEEEE
T ss_pred eeeeeeecccccc-cccccc-------cccceeeecc
Confidence 6899999999996 555543 2377777655
No 312
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=35.31 E-value=5.9 Score=32.51 Aligned_cols=21 Identities=24% Similarity=0.409 Sum_probs=15.4
Q ss_pred eEEEEeccCCcchHHHHHHHhc
Q 003013 171 SVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
.-|+|+|+|+||. |+|..+..
T Consensus 4 ~KI~IIGaG~VG~-~~a~~l~~ 24 (150)
T d1t2da1 4 AKIVLVGSGMIGG-VMATLIVQ 24 (150)
T ss_dssp CEEEEECCSHHHH-HHHHHHHH
T ss_pred CeEEEECCCHHHH-HHHHHHHh
Confidence 3689999999995 56655544
No 313
>d1etea_ a.26.1.2 (A:) Flt3 ligand {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.97 E-value=22 Score=26.36 Aligned_cols=64 Identities=17% Similarity=0.465 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHh-hchhhHHHHHHHHHHHHHHhhcCCcccCCCCCCcccccccccccccccCCCCchhHHH-HHHHHH
Q 003013 20 KSVKMWLDNLQNLA-YDVQDVLDELETEALQRELLLQEPAAADQPSSSANTSKFRKLIPTCCTNFSPRSIQFE-SKMVSK 97 (857)
Q Consensus 20 ~~v~~Wl~~v~~~~-~d~edv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 97 (857)
.-.+.|+.+++.|| .|++.++++...++ +|+..|.....|.-++|+ -.|+.-
T Consensus 51 ~laqr~~~rl~~VAGs~m~~LLe~v~tei--------------------------hFV~~C~~qp~p~clrfvq~nishl 104 (134)
T d1etea_ 51 VLAQRWMERLKTVAGSKMQGLLERVNTEI--------------------------HFVTKCAFQPPPSCLRFVQTNISRL 104 (134)
T ss_dssp HHHHHHHHHHHTTBCHHHHHHHHHHHHHH--------------------------GGGGGSCCCCCCTTCCEEEEEHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhhhh--------------------------hHHHHhhccCCHHHHHHHHHhHHHH
Confidence 35688999999877 57888888887765 233444333333333333 256666
Q ss_pred HHHHHHHHHHHH
Q 003013 98 IKGITDRLQDII 109 (857)
Q Consensus 98 ~~~~~~~l~~l~ 109 (857)
+++....+..+.
T Consensus 105 l~dts~ql~al~ 116 (134)
T d1etea_ 105 LQETSEQLVALK 116 (134)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 776666666653
No 314
>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}
Probab=33.96 E-value=8.7 Score=33.08 Aligned_cols=31 Identities=16% Similarity=0.287 Sum_probs=22.3
Q ss_pred eEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeC
Q 003013 171 SVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVS 209 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs 209 (857)
+.|||+|+|.|||.. |+.. +.|...+..+-.
T Consensus 50 ktvgIiG~G~IG~~v-a~~l-------~~fg~~v~~~d~ 80 (193)
T d1mx3a1 50 ETLGIIGLGRVGQAV-ALRA-------KAFGFNVLFYDP 80 (193)
T ss_dssp CEEEEECCSHHHHHH-HHHH-------HTTTCEEEEECT
T ss_pred ceEEEeccccccccc-eeee-------eccccceeeccC
Confidence 689999999999765 4433 348877766543
No 315
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.39 E-value=9.7 Score=37.54 Aligned_cols=20 Identities=30% Similarity=0.454 Sum_probs=17.7
Q ss_pred EEEEeccCCcchHHHHHHHh
Q 003013 172 VISINGMAGVGKTTLAQLVY 191 (857)
Q Consensus 172 vi~I~GmgGvGKTTLa~~v~ 191 (857)
+-.|+|.-|.||||+..+|.
T Consensus 27 l~~i~G~NGsGKS~ileAi~ 46 (427)
T d1w1wa_ 27 FTSIIGPNGSGKSNMMDAIS 46 (427)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 55699999999999999884
No 316
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}
Probab=29.25 E-value=10 Score=31.15 Aligned_cols=23 Identities=17% Similarity=0.173 Sum_probs=17.2
Q ss_pred CceEEEEeccCCcchHHHHHHHhc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
+-+.|+|+|.|+|| .++|..+-.
T Consensus 6 k~~KI~IIGaG~VG-~~lA~~l~~ 28 (154)
T d1pzga1 6 RRKKVAMIGSGMIG-GTMGYLCAL 28 (154)
T ss_dssp CCCEEEEECCSHHH-HHHHHHHHH
T ss_pred CCCcEEEECCCHHH-HHHHHHHHh
Confidence 55789999999999 566665433
No 317
>d1o5za2 c.72.2.2 (A:-2-293) Folylpolyglutamate synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=26.56 E-value=21 Score=32.98 Aligned_cols=36 Identities=28% Similarity=0.332 Sum_probs=25.5
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 152 KEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 152 ~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
..++.+.|-. +..++++|||-|- =||||.+..++.-
T Consensus 29 ~~~~l~~lg~----P~~~lkvI~VTGT--NGKTSt~~~i~~I 64 (296)
T d1o5za2 29 ISMLLSKLGN----PHLEYKTIHIGGT--NGKGSVANMVSNI 64 (296)
T ss_dssp HHHHHHHTTC----GGGSSEEEEEECS--SSHHHHHHHHHHH
T ss_pred HHHHHHHcCC----chhhCCEEEEEec--CcHHHHHHHHHHH
Confidence 4555555522 3457899999976 4799999998774
No 318
>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}
Probab=26.34 E-value=39 Score=27.25 Aligned_cols=47 Identities=21% Similarity=0.297 Sum_probs=31.0
Q ss_pred eEEEEeccCC-cchHHHHHHHhcccchhccCCceEEEEeCCCCCHHHHHHHHHHH
Q 003013 171 SVISINGMAG-VGKTTLAQLVYNDDRVQRHYEIKAWTCVSEDFDVFGVSKFILNS 224 (857)
Q Consensus 171 ~vi~I~GmgG-vGKTTLa~~v~~~~~~~~~Fd~~~wv~vs~~~~~~~i~~~i~~~ 224 (857)
+-|+|.|-.| ||++||-- .. +..+.|+.+..++ .-+++.+.+++.+-
T Consensus 2 K~I~IlGsTGSIG~~tL~V--i~--~~~d~f~v~~Lsa---~~N~~~L~~q~~~f 49 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDV--VR--HNPEHFRVVALVA---GKNVTRMVEQCLEF 49 (151)
T ss_dssp EEEEEETTTSHHHHHHHHH--HH--HCTTTEEEEEEEE---SSCHHHHHHHHHHH
T ss_pred CeEEEEcCCcHHHHHHHHH--HH--hCCCCcEEEEEEe---cCcHHHHHHHHHHH
Confidence 5689999999 99999952 22 2345677666544 33566666666543
No 319
>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=26.00 E-value=9.9 Score=32.29 Aligned_cols=16 Identities=13% Similarity=0.358 Sum_probs=13.7
Q ss_pred eEEEEeccCCcchHHH
Q 003013 171 SVISINGMAGVGKTTL 186 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTL 186 (857)
+.|||+|+|.|||-..
T Consensus 43 k~vgIiG~G~IG~~va 58 (181)
T d1qp8a1 43 EKVAVLGLGEIGTRVG 58 (181)
T ss_dssp CEEEEESCSTHHHHHH
T ss_pred ceEEEeccccccccce
Confidence 6799999999998653
No 320
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=25.16 E-value=41 Score=27.09 Aligned_cols=50 Identities=20% Similarity=0.337 Sum_probs=31.1
Q ss_pred ceEEEEeccCC-cchHHHHHHHhcccchhccCCceEEEEeCCCCCHHHHHHHHHHHccC
Q 003013 170 FSVISINGMAG-VGKTTLAQLVYNDDRVQRHYEIKAWTCVSEDFDVFGVSKFILNSIAK 227 (857)
Q Consensus 170 ~~vi~I~GmgG-vGKTTLa~~v~~~~~~~~~Fd~~~wv~vs~~~~~~~i~~~i~~~l~~ 227 (857)
.+-|+|.|-.| ||+.||- |.+ +..+.|..+...+- + +++.+.+++ ..+..
T Consensus 2 pK~I~IlGsTGSIG~~tL~--Vi~--~~~d~f~v~~lsa~-~--N~~~L~~q~-~ef~P 52 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLD--LIE--RNLDRYQVIALTAN-R--NVKDLADAA-KRTNA 52 (150)
T ss_dssp CEEEEEETTTSHHHHHHHH--HHH--HTGGGEEEEEEEES-S--CHHHHHHHH-HHTTC
T ss_pred CcEEEEECCCcHHHHHHHH--HHH--cCCCCcEEEEEEeC-C--CHHHHHHHH-Hhhcc
Confidence 47899999999 9999993 333 23346766665443 2 455554444 34433
No 321
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=24.25 E-value=77 Score=26.83 Aligned_cols=50 Identities=22% Similarity=0.202 Sum_probs=29.8
Q ss_pred eecchhHHHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeC
Q 003013 145 VYGREKEKEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVS 209 (857)
Q Consensus 145 ~vG~~~~~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs 209 (857)
+-=|+...+-+-.++ .. + +.| |++..|.|||..|-.+... +...+.+.+.
T Consensus 69 ~~Lr~yQ~eav~~~~-~~------~-~~l-l~~~tG~GKT~~a~~~~~~------~~~~~Liv~p 118 (206)
T d2fz4a1 69 ISLRDYQEKALERWL-VD------K-RGC-IVLPTGSGKTHVAMAAINE------LSTPTLIVVP 118 (206)
T ss_dssp CCCCHHHHHHHHHHT-TT------S-EEE-EEESSSTTHHHHHHHHHHH------SCSCEEEEES
T ss_pred CCcCHHHHHHHHHHH-hC------C-CcE-EEeCCCCCceehHHhHHHH------hcCceeEEEc
Confidence 445666666555554 22 2 233 6677899999988777653 3445555554
No 322
>d2gc6a2 c.72.2.2 (A:1-296) Folylpolyglutamate synthetase {Lactobacillus casei [TaxId: 1582]}
Probab=24.10 E-value=19 Score=33.30 Aligned_cols=36 Identities=19% Similarity=0.179 Sum_probs=25.2
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEeccCCcchHHHHHHHhcc
Q 003013 152 KEEIIELLLNDDLRADDGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 152 ~~~i~~~L~~~~~~~~~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
..++++.|-. +++++++|+|-|- -||||.+..+..=
T Consensus 25 ~~~~l~~lg~----P~~~lkvI~VTGT--NGKtST~~~i~~I 60 (296)
T d2gc6a2 25 ILTLLHALGN----PQQQGRYIHVTGT--NGKGSAANAIAHV 60 (296)
T ss_dssp HHHHHHHTTC----GGGSSCEEEEECS--SSHHHHHHHHHHH
T ss_pred HHHHHHHcCC----chhhCCEEEEecc--CcHHHHHHHHHHH
Confidence 4445555522 3458999999865 5899999988773
No 323
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=23.65 E-value=24 Score=31.24 Aligned_cols=23 Identities=22% Similarity=0.127 Sum_probs=20.3
Q ss_pred ceEEEEeccCCcchHHHHHHHhc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
-+++-|-|.-+-||||++|.|.-
T Consensus 41 ~~~~iiTGpN~~GKSt~lk~i~l 63 (234)
T d1wb9a2 41 RRMLIITGPNMGGKSTYMRQTAL 63 (234)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHH
T ss_pred ceEEEEeccCchhhHHHHHHHHH
Confidence 47888999999999999999855
No 324
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=23.52 E-value=46 Score=30.39 Aligned_cols=25 Identities=16% Similarity=0.290 Sum_probs=22.2
Q ss_pred CceEEEEeccCCcchHHHHHHHhcc
Q 003013 169 GFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 169 ~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
+...|.|+|--+.|||||..++...
T Consensus 25 ~~P~ivvvG~~SsGKSsliNaLlg~ 49 (299)
T d2akab1 25 DLPQIAVVGGQSAGKSSVLENFVGR 49 (299)
T ss_dssp CCCEEEEEEBTTSCHHHHHHHHHTS
T ss_pred CCCeEEEEcCCCCCHHHHHHHHhCC
Confidence 5667999999999999999999874
No 325
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=23.47 E-value=19 Score=30.98 Aligned_cols=17 Identities=29% Similarity=0.401 Sum_probs=13.6
Q ss_pred EEEeccCCcchHHHHHH
Q 003013 173 ISINGMAGVGKTTLAQL 189 (857)
Q Consensus 173 i~I~GmgGvGKTTLa~~ 189 (857)
+-|.+.-|.|||+.|..
T Consensus 43 ~il~apTGsGKT~~a~l 59 (202)
T d2p6ra3 43 LLLAMPTAAGKTLLAEM 59 (202)
T ss_dssp EEEECSSHHHHHHHHHH
T ss_pred EEEEcCCCCchhHHHHH
Confidence 34889999999998743
No 326
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=23.47 E-value=19 Score=28.22 Aligned_cols=19 Identities=21% Similarity=0.111 Sum_probs=14.2
Q ss_pred eEEEEeccCCcchHHHHHH
Q 003013 171 SVISINGMAGVGKTTLAQL 189 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~ 189 (857)
...-|++..|.|||+.|-.
T Consensus 8 ~~~il~~~tGsGKT~~~~~ 26 (140)
T d1yksa1 8 MTTVLDFHPGAGKTRRFLP 26 (140)
T ss_dssp CEEEECCCTTSSTTTTHHH
T ss_pred CcEEEEcCCCCChhHHHHH
Confidence 4556777889999977743
No 327
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.44 E-value=23 Score=27.34 Aligned_cols=23 Identities=13% Similarity=0.075 Sum_probs=19.2
Q ss_pred ceEEEEeccCCcchHHHHHHHhc
Q 003013 170 FSVISINGMAGVGKTTLAQLVYN 192 (857)
Q Consensus 170 ~~vi~I~GmgGvGKTTLa~~v~~ 192 (857)
--+|-+-|.-|.||.|||.++..
T Consensus 6 gf~i~~tg~~~~gk~~ia~al~~ 28 (122)
T d1g8fa3 6 GFSIVLGNSLTVSREQLSIALLS 28 (122)
T ss_dssp CEEEEECTTCCSCHHHHHHHHHH
T ss_pred ceEEEEeCCCCCCHHHHHHHHHH
Confidence 35677889999999999998855
No 328
>d1e8ca3 c.72.2.1 (A:104-337) UDP-N-acetylmuramyl tripeptide synthetase MurE {Escherichia coli [TaxId: 562]}
Probab=22.94 E-value=18 Score=31.79 Aligned_cols=24 Identities=33% Similarity=0.494 Sum_probs=19.4
Q ss_pred CCceEEEEeccCCcchHHHHHHHhcc
Q 003013 168 DGFSVISINGMAGVGKTTLAQLVYND 193 (857)
Q Consensus 168 ~~~~vi~I~GmgGvGKTTLa~~v~~~ 193 (857)
++++||||-|- .||||.+..++.-
T Consensus 3 ~~~~vI~ITGT--~GKTTt~~~l~~i 26 (234)
T d1e8ca3 3 DNLRLVGVTGT--NGKTTTTQLLAQW 26 (234)
T ss_dssp GSSEEEEEESS--SCHHHHHHHHHHH
T ss_pred cCCeEEEEECC--CcHHHHHHHHHHH
Confidence 47889999865 5999999988763
No 329
>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=22.61 E-value=20 Score=28.09 Aligned_cols=34 Identities=24% Similarity=0.376 Sum_probs=24.2
Q ss_pred eEEEEeccCCcchHHHHHHHhcccchhccCCceEEEEeC
Q 003013 171 SVISINGMAGVGKTTLAQLVYNDDRVQRHYEIKAWTCVS 209 (857)
Q Consensus 171 ~vi~I~GmgGvGKTTLa~~v~~~~~~~~~Fd~~~wv~vs 209 (857)
.-|.|||+|..|. .|++.+ .....|..++|+...
T Consensus 4 ~~v~I~GaG~~G~-~l~~~l----~~~~~~~iv~fiDdd 37 (126)
T d2dt5a2 4 WGLCIVGMGRLGS-ALADYP----GFGESFELRGFFDVD 37 (126)
T ss_dssp EEEEEECCSHHHH-HHHHCS----CCCSSEEEEEEEESC
T ss_pred ceEEEEcCCHHHH-HHHHhH----hhcCCcEEEEEEeCc
Confidence 4689999999998 444433 334568888888753
No 330
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=20.41 E-value=20 Score=37.29 Aligned_cols=17 Identities=35% Similarity=0.360 Sum_probs=13.1
Q ss_pred EEEeccCCcchHHHHHH
Q 003013 173 ISINGMAGVGKTTLAQL 189 (857)
Q Consensus 173 i~I~GmgGvGKTTLa~~ 189 (857)
+-|.|-+|.||||.+-+
T Consensus 27 ~lV~A~AGSGKT~~lv~ 43 (623)
T g1qhh.1 27 LLIMAGAGSGKTRVLTH 43 (623)
T ss_dssp EEEEECTTSCHHHHHHH
T ss_pred EEEEEeCchHHHHHHHH
Confidence 55668899999988743
Done!