BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003016
(857 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255568609|ref|XP_002525278.1| GTP binding protein, putative [Ricinus communis]
gi|223535436|gb|EEF37106.1| GTP binding protein, putative [Ricinus communis]
Length = 1010
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/858 (54%), Positives = 592/858 (68%), Gaps = 73/858 (8%)
Query: 27 EIQKHNRKQAKIQSQAQLSPSQQQALAEEQHFQTLKREFKMFRRAVAAKSGDP----LVG 82
+IQKHNRK K+ SQAQL+ SQ+QALAEE HFQTL E++ F +A+ ++ LVG
Sbjct: 177 QIQKHNRKITKV-SQAQLTASQKQALAEESHFQTLTSEYRTFTKAIKGETRSSTSGLLVG 235
Query: 83 KPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFEKDLNWVLDDDVQL--GSDYFA 140
+PWERIER+K R++ S S +F G+ L E+LRELKE FE LNWVLD+D++L D+ +
Sbjct: 236 RPWERIERVKLREIVSGSNQFNGNKLNVESLRELKENFEDGLNWVLDNDIELENNDDWLS 295
Query: 141 KNVEWH--PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLK 198
+W P KR R++ E IR LVDRLS+R++T ++WK +IM QSGL F+EGQ++K+++
Sbjct: 296 SENQWQYDPAKRRRNDKEEIRFLVDRLSKRDVTVRDWKLAKIMKQSGLRFSEGQLMKIVE 355
Query: 199 GLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC 258
GLG+KG W QAM+V++WVY K++RD KSRFVYTKLL++L RP EALRIFN M ED
Sbjct: 356 GLGNKGKWEQAMAVVEWVYNDKERRDSKSRFVYTKLLSVLRIERRPKEALRIFNSMREDH 415
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
NLYPD+AAYH +AVTLGQ G LKEL+K++E M+Q+PSKRI M K WDPVLEPD+V+YN
Sbjct: 416 NLYPDMAAYHVIAVTLGQAGNLKELLKIVECMKQQPSKRINKMCYKRWDPVLEPDIVIYN 475
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES-------------YRR---- 361
AVLNACVP+ QWKGV WVF+QLRKSGLKP+ ATYGLAME +R+
Sbjct: 476 AVLNACVPTQQWKGVAWVFEQLRKSGLKPNGATYGLAMEVMLNSGKYDLVHELFRKMNRS 535
Query: 362 ------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
KVLVRAFWEEGK+NEA+ AVR+ME RGVVGTAS+YYELACCLC G WQDA
Sbjct: 536 GEAPKALTYKVLVRAFWEEGKVNEAMEAVRDMENRGVVGTASLYYELACCLCYYGMWQDA 595
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKV 475
ML V+K+K+LRHSKPLE+TFTGLI+SS+DGGH+ DCISIF++MK +C PNIGT+N MLKV
Sbjct: 596 MLEVKKMKNLRHSKPLEVTFTGLIMSSLDGGHVSDCISIFEYMKAYCVPNIGTINIMLKV 655
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
Y RND+FSKAKELF E N+ DG L PDE+TYSSMLEASA+A QWEYFE
Sbjct: 656 YGRNDLFSKAKELFGEIKGTNN--------DGTYLVPDEFTYSSMLEASASALQWEYFEL 707
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
VYK M G QLDQ KHA LLVEASR GK HLLEHAFD+ LEAGEIPH L FTEM+ QA
Sbjct: 708 VYKEMTFCGYQLDQKKHASLLVEASRVGKYHLLEHAFDAALEAGEIPHHLLFTEMVFQAT 767
Query: 596 VQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEI 655
Q NYE+AV L+N +A APF I+E+QW +LF+ N D+I++D LEKLL+AL + + A SE
Sbjct: 768 AQQNYERAVVLVNTLALAPFKISEKQWIDLFQKNGDKITQDGLEKLLDALRSSDVA-SEP 826
Query: 656 TVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPLHGIHEAFDVKETENVPSSSASMM 715
TV+NLSR LH+LC + LS S G DV + + S S +M
Sbjct: 827 TVANLSRTLHSLCGRGRSEYLSGSTSLG---------------IDVTNSSYLDSGSRKIM 871
Query: 716 FENA-DLGADPLPQKTDVAVDIDSINHSSLSRQADADT-EMFSKALSYIHSNDRPSNLCI 773
+ ++ D L KTD+A S+ S+ + DT E S +Y D +++C
Sbjct: 872 GDKGPEMHEDTLIDKTDIAYGDLSVTRSNTGGEGSDDTDEASSSPRNYSTDRDGIASICT 931
Query: 774 DMEGLADDWASSEHSDYLDKELAALYLSKQSQDNDVVDLQKSMNRVGGSRRSELPSASEI 833
+++ DD AS +D L D D ++ +N+V S ++LPSA EI
Sbjct: 932 NVKIFGDDEASGASTDCL--------------DFDEMEYGIPINQVDDSCGTKLPSADEI 977
Query: 834 LEAWKESREKDGIFFPFE 851
L+ WKESR K +FFPF+
Sbjct: 978 LDIWKESR-KGRLFFPFQ 994
>gi|356565493|ref|XP_003550974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Glycine max]
Length = 865
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/873 (54%), Positives = 596/873 (68%), Gaps = 69/873 (7%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAKIQSQAQLSPSQQQALAEEQHFQTL 61
+KI+++L++ GV PTPKI+ ++RKKEIQKHNRK K Q L+ +Q QA AEEQH +T+
Sbjct: 21 DKIRRRLIEKGVQPTPKIVHTLRKKEIQKHNRK-LKAQPAPPLTQAQAQAAAEEQHLETI 79
Query: 62 KREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLA--SESKEFAGDNLKRENLRELKEM 119
KREF RR +A GKPWE I++++F + A E G+ L+RE+L ELKEM
Sbjct: 80 KREF---RRVMA--------GKPWEGIQKVEFLEKARRPERDCGGGEKLRRESLTELKEM 128
Query: 120 FE----KDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNW 175
FE +L WV D D+++ +F + + + RSE E IR LV RLS++E+T K+W
Sbjct: 129 FEARKMDELKWVFDADLEIDEVWFDEGYGARGKTQKRSEVEVIRFLVHRLSDKEITMKDW 188
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
KF R+M SGL FTEGQ+L++++ LG K W+QA+SV+ WVY KD R +SRFVYTKLL
Sbjct: 189 KFSRMMKMSGLPFTEGQLLRIVELLGFKRCWKQALSVVQWVYNYKDHRKFQSRFVYTKLL 248
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
++LGKAGRP+EAL+IFN+M E ++YPDIAAYHSVAVTLGQ GLLKEL+ ++E MRQKP
Sbjct: 249 SVLGKAGRPNEALQIFNMMRESIHIYPDIAAYHSVAVTLGQAGLLKELLNIVECMRQKPK 308
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
MHRKNWDPVLEPD+V+YNAVLNACVPS QWKGV WVFKQLRKSGLKP+ ATYGLA
Sbjct: 309 AF---MHRKNWDPVLEPDVVIYNAVLNACVPSKQWKGVSWVFKQLRKSGLKPNGATYGLA 365
Query: 356 MESY-----------------------RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
ME + KVLV+ FW+EGK+NEAV AVR+ME+RGV
Sbjct: 366 MEVMLESGNYDLVHEFFGKMKRSGEVPKALTYKVLVKTFWKEGKVNEAVKAVRDMERRGV 425
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 452
+GTASVYYELACCLCNNGRWQDA+L V+ I+SL H+KPLE+TFTG+I SSMDGGHI+DCI
Sbjct: 426 IGTASVYYELACCLCNNGRWQDAILEVDNIRSLPHAKPLEVTFTGMIKSSMDGGHINDCI 485
Query: 453 SIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
IF++MK+HC PNIG +N MLKVY +NDMFSKAK LFEE A S Y G + + P
Sbjct: 486 CIFEYMKEHCVPNIGAINTMLKVYGQNDMFSKAKVLFEEVKVAKSEFYATPEGGYSSVVP 545
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
D Y+Y+SMLEASATA QWEYFE+VY+ M +SG QLDQ KH LLV+ASRAGK HLLEHAF
Sbjct: 546 DVYSYNSMLEASATAQQWEYFEHVYREMIVSGYQLDQDKHLSLLVKASRAGKLHLLEHAF 605
Query: 573 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDR 632
D +LEAGEIPH LFF E++IQAI Q NYE+AV LIN MAYAPF +TE+QWT LF+ +EDR
Sbjct: 606 DMILEAGEIPHHLFFFELVIQAIAQHNYERAVILINTMAYAPFRVTEKQWTNLFKESEDR 665
Query: 633 ISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPL 692
IS + LE+LL+AL NC+ SE+TVSNL+R+LH LC R+ SS FGS+ + +
Sbjct: 666 ISLENLERLLDALGNCDIV-SELTVSNLTRSLHVLCGLGTSRNFSSIIPFGSE----NSV 720
Query: 693 HGIHEAFDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSINHSSLSRQADADT 752
+G++E D + NVP S MM E + D L + + + ++ ++D
Sbjct: 721 NGLNEGID--DDGNVPKISRRMMIEGVESKNDILVASYHTEPETIAFSRDQVNGGDNSDV 778
Query: 753 EMFSKALSYIHSNDRPSNLCIDMEGLADDWASSEHSDYLDKELAALYLSKQSQDNDVVDL 812
+F SYI +L D D+ A + SD LD+EL S+ V+D
Sbjct: 779 MVFRPQNSYIEDG---KSLYADSLECTDNLALDKSSDELDEELWDDGSSEDDDGEGVID- 834
Query: 813 QKSMNRVGGSRRSELPSASEILEAWKESREKDG 845
PSA EILE WKE RE+DG
Sbjct: 835 --------------KPSAYEILEVWKEMREEDG 853
>gi|449448456|ref|XP_004141982.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Cucumis sativus]
gi|449499902|ref|XP_004160949.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Cucumis sativus]
Length = 860
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/883 (51%), Positives = 612/883 (69%), Gaps = 82/883 (9%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAKI--QSQAQ---LSPSQQQALAEEQ 56
+KIK+ LL+ GV+PTP+I+RS+RKKEIQK+NRK ++ + AQ LS SQ+Q +AEE
Sbjct: 20 DKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQSAQSPPLSESQKQLIAEET 79
Query: 57 HFQTLKREFKMFRRAVAAK-SGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRE 115
HF TL+ E+K F +A+ AK +G +VG+PWER+ER+ F++L + D+LK+E+LRE
Sbjct: 80 HFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKELTGVRTGYNRDSLKKESLRE 139
Query: 116 LKEMFE----KDLNWVLDDDVQLGSDYF-AKNVEWHPEKRWRSEAEAIRVLVDRLSEREM 170
L+++FE ++ W LDDDV+L ++ ++N + KR R + E IR LVDRLS +
Sbjct: 140 LRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRRRGDGEVIRFLVDRLSSGPI 199
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
+ ++WKF R+M +SGL F EGQ+LK+L LG KG W+QA+SV++WVY LK KSRFV
Sbjct: 200 SMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYNLKSHSHSKSRFV 259
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YTKLLA+LG A +P EAL+IFNLM D +YPD+AAYHS+AVTLGQ GLLK+L+K+IE M
Sbjct: 260 YTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIEFM 319
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
RQ+PSK+++N RK+WDP +EPDLV+YNA+LNAC+P+ +WKGV+WVF QLRKSGL+P+ A
Sbjct: 320 RQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGA 379
Query: 351 TYGLAME-----------------------SYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
TYGL+ME + + +VLV+AFWEEG +N A+ AVR+M
Sbjct: 380 TYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLVKAFWEEGNVNGAIEAVRDM 439
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
EQRGVVG+ASVYYELACCLC NG+WQDA++ VEK+K+L H KPL +TFTG+I SS +GGH
Sbjct: 440 EQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHMKPLVVTFTGMISSSFNGGH 499
Query: 448 IDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
IDDCISIF++MK C PNIGT+N MLKVY RNDM+SKAK+LFEE R S S D
Sbjct: 500 IDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDLFEEIKRKADSS----SHDS 555
Query: 508 A--PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
A L PDEYTY+SMLEA+A++ QWEYFE VY+ MALSG QLDQ+KHA LLVEAS+AGK
Sbjct: 556 AVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQSKHALLLVEASKAGKW 615
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 625
+LL+HAFD++LEAG+IPHPL FTEM++Q Q NYE+AV L+ M YAPF ++ERQWTEL
Sbjct: 616 YLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTMGYAPFQVSERQWTEL 675
Query: 626 FESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQ 685
FE N DRI R+ L++LL+AL +C+A SE TVSNLSR+L +LC+ + + S S
Sbjct: 676 FEGNTDRIRRNNLKQLLHALGDCDA--SEATVSNLSRSLQSLCKFDIPENTSQSV----- 728
Query: 686 AIDISPLHGIHEAFDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSINHSSLS 745
A D H + + ++EN+ EN L D D ++DI ++H+SL+
Sbjct: 729 ACD----HDATDELQLPDSENM---------ENMKLHPD-----EDESLDIIPVDHASLN 770
Query: 746 RQADADTEMFSKALSYIHSNDRPSNLCIDMEGLADDWASSEHSDYLDKELAALYLSKQSQ 805
+ +++++M P ++ I L + + SD + + L +S+
Sbjct: 771 MKVNSESKM------------SPWSVSISDGAL----GTGQFSDGSNNVHSPFDLCGESE 814
Query: 806 DNDVVDLQKSMNRVGGSRRSELPSASEILEAWKESREKDGIFF 848
D D +L ++ + S LP+ +EILE WKE R+ DG+F
Sbjct: 815 D-DEEELNTLLDEFDDAYDSNLPAVNEILETWKEERKADGLFL 856
>gi|357476491|ref|XP_003608531.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509586|gb|AES90728.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 877
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/882 (51%), Positives = 587/882 (66%), Gaps = 79/882 (8%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAKIQSQAQLSP----SQQQALAEEQH 57
+KI++ L++ GV PTPKI+ ++RKK+IQKHNRK + Q QL+P SQ+Q L EEQH
Sbjct: 25 DKIRRSLIQKGVTPTPKIIHTLRKKQIQKHNRK---LNRQNQLNPPLSKSQKQTLEEEQH 81
Query: 58 FQTLKREFKMFRRAV----AAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENL 113
FQ LK E+K F + + G L+GKPWE +E++ F + + E G+ LKRE+L
Sbjct: 82 FQELKHEYKQFTQNLEENQGGNKGLCLIGKPWEGVEKVDFLERIKVNYEHRGEKLKRESL 141
Query: 114 RELKEMFEK----DLNWVLDDDVQLGSDYFAKNVEWHPEKRW-RSEAEAIRVLVDRLSER 168
ELKEMF + +L WV +DD+++ +F +N +K RSE + +R LVDRL ++
Sbjct: 142 IELKEMFRERKMDELKWVFEDDIEINEVWFDENNNGKRKKTSKRSEVQVVRFLVDRLCDK 201
Query: 169 EMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR 228
E+ AK+WKF R+M SGL FTEGQ++ +++ LG K W+QA+SV+ WVY KD R +SR
Sbjct: 202 EIRAKDWKFSRLMKLSGLSFTEGQLMMIIEMLGVKRCWKQALSVVQWVYNSKDHRKFQSR 261
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
FVYTKLLA+LGKA RP EAL+IFN+ML + +YPD+AAYHS+AVTLGQ GLLKEL+ ++E
Sbjct: 262 FVYTKLLAVLGKARRPKEALQIFNMMLGNIRVYPDMAAYHSIAVTLGQAGLLKELLNIVE 321
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MRQKP + +K M+RKNWDP LEPD+V+YNAVLNACVPS QWKGV WVF+Q+RKS LKP+
Sbjct: 322 CMRQKP-ETLKYMYRKNWDPTLEPDVVIYNAVLNACVPSKQWKGVSWVFQQMRKSSLKPN 380
Query: 349 AATYGLAMESYRRC-----------------------LLKVLVRAFWEEGKINEAVAAVR 385
ATYGLAME + KV+VR FW+EGK++EAV AVR
Sbjct: 381 GATYGLAMEVMLQSGNYDLVHELFEKMQRNGEVPEALTYKVMVRTFWKEGKVDEAVKAVR 440
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
+ME+RGV+GTASVYYELACCLCN GRWQDA L VEKIK L H+KPLE+TFTG+I SSMDG
Sbjct: 441 DMERRGVMGTASVYYELACCLCNCGRWQDATLEVEKIKRLPHAKPLEVTFTGMIRSSMDG 500
Query: 446 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
GHIDDCI IF++M+DHC PN+GTVN MLKVYS+NDMFS AK LFEE A S
Sbjct: 501 GHIDDCICIFEYMQDHCAPNVGTVNTMLKVYSQNDMFSTAKVLFEEVKVAKSD------- 553
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
L+PD YTY+ MLEAS+ HQWEYFE+VYK M LSG LDQ KH LLV+ASRAGK
Sbjct: 554 ----LRPDAYTYNLMLEASSRGHQWEYFEHVYKEMILSGYHLDQNKHLPLLVKASRAGKL 609
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 625
HLLEHAFD +LEAGEIPH LFF E++IQAI Q NYE+A+ L++ MA+AP+ +TE+QWTEL
Sbjct: 610 HLLEHAFDMVLEAGEIPHHLFFFELVIQAIAQHNYERAIILLSTMAHAPYRVTEKQWTEL 669
Query: 626 FESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQ 685
F+ NEDRI+ + L++LL+ L NCN SE T+SNLSR+LH LC R++SS F S+
Sbjct: 670 FKENEDRINHENLKRLLDDLGNCNVV-SEATISNLSRSLHDLCGLGSSRNISSIIPFRSE 728
Query: 686 AIDISPLHGIHEAFDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSINHSSLS 745
+D ++E + E P+ S MM E A+ G D L D+ + N +
Sbjct: 729 NVDC-----LNETINGGENGKAPNFSGRMMIEGAESGNDILFGGDQAEPDMFTFNDDQVD 783
Query: 746 RQADADTEMFSKALSYIHSNDRPSNLCIDMEGLADDWASSEHSDYLDKELAALYLSKQSQ 805
R + D + I S+ C+D ++LD+ L L K S
Sbjct: 784 RVNNNDVVVCRPQNRVIEDK---SSFCVD------------RPEFLDR----LTLDKSSD 824
Query: 806 DNDVVDLQKSMNRVGGSRRSEL---PSASEILEAWKESREKD 844
D++ E+ PSA +ILEAWKE RE+D
Sbjct: 825 DSEDELSDDESYEDDDDGDKEVIDKPSAYQILEAWKEMREED 866
>gi|334188692|ref|NP_201558.3| delayed greening 1 protein [Arabidopsis thaliana]
gi|223635752|sp|Q9FJW6.2|PP451_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g67570, chloroplastic; AltName: Full=Protein DELAYED
GREENING 1; AltName: Full=Protein EMBRYO DEFECTIVE 1408;
Flags: Precursor
gi|332010978|gb|AED98361.1| delayed greening 1 protein [Arabidopsis thaliana]
Length = 798
Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/698 (59%), Positives = 525/698 (75%), Gaps = 43/698 (6%)
Query: 1 MEKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAK-IQSQAQL-SPSQQQALAEEQHF 58
MEKIK++LLK+GV PTPKIL ++RKKEIQKHNR+ + +S+A++ + +Q+Q++ EE F
Sbjct: 23 MEKIKRRLLKYGVDPTPKILNNLRKKEIQKHNRRTKRETESEAEVYTEAQKQSMEEEARF 82
Query: 59 QTLKREFKMFRRAVAAKSGDP---LVGKPWERIERLKFRQLAS--ESKEFAGDNLKRENL 113
QTL+RE+K F R+++ K G +VG PWE IER+K ++L S +E + LK+ENL
Sbjct: 83 QTLRREYKQFTRSISGKRGGDVGLMVGNPWEGIERVKLKELVSGVRREEVSAGELKKENL 142
Query: 114 RELKEMFEKDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAK 173
+ELK++ EKDL WVLDDDV + K E+ P KRWR+E EA+RVLVDRLS RE+ K
Sbjct: 143 KELKKILEKDLRWVLDDDVDVEEFDLDK--EFDPAKRWRNEGEAVRVLVDRLSGREINEK 200
Query: 174 NWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTK 233
+WKFVR+MNQSGL FTE QMLK++ LG K SW+QA +V+ WVY K ++ L+SRFVYTK
Sbjct: 201 HWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSDKKRKHLRSRFVYTK 260
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LL++LG A RP EAL+IFN ML D LYPD+AAYH +AVTLGQ GLLKEL+K+IERMRQK
Sbjct: 261 LLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQK 320
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
P+K KN+ +KNWDPVLEPDLVVYNA+LNACVP+ QWK V WVF +LRK+GL+P+ ATYG
Sbjct: 321 PTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYG 380
Query: 354 LAMES-------------YRR----------CLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
LAME +R+ KVLVRA W EGKI EAV AVR+MEQ+
Sbjct: 381 LAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQK 440
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
GV+GT SVYYELACCLCNNGRW DAML V ++K L + +PLEITFTGLI +S++GGH+DD
Sbjct: 441 GVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDD 500
Query: 451 CISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 510
C++IFQ+MKD C+PNIGT N MLKVY RNDMFS+AKELFEE +S L
Sbjct: 501 CMAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEE----------IVSRKETHL 550
Query: 511 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 570
P+EYTYS MLEASA + QWEYFE+VY+ M LSG Q+DQTKHA +L+EASRAGK LLEH
Sbjct: 551 VPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRAGKWSLLEH 610
Query: 571 AFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNE 630
AFD++LE GEIPHPLFFTE+L A + ++++A+ LIN +A A F I+E +WT+LFE ++
Sbjct: 611 AFDAVLEDGEIPHPLFFTELLCHATAKGDFQRAITLINTVALASFQISEEEWTDLFEEHQ 670
Query: 631 DRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALC 668
D +++D L KL + L C+ SE TVSNLS++L + C
Sbjct: 671 DWLTQDNLHKLSDHLIECDYV-SEPTVSNLSKSLKSRC 707
>gi|297797625|ref|XP_002866697.1| EMB1408 [Arabidopsis lyrata subsp. lyrata]
gi|297312532|gb|EFH42956.1| EMB1408 [Arabidopsis lyrata subsp. lyrata]
Length = 621
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/595 (59%), Positives = 452/595 (75%), Gaps = 42/595 (7%)
Query: 1 MEKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAK-IQSQAQL-SPSQQQALAEEQHF 58
MEKIK++LLK+GV PTPKIL ++RKKEIQKHNR+ + +S+A++ + +Q+Q++ EE F
Sbjct: 23 MEKIKRRLLKYGVDPTPKILNNLRKKEIQKHNRRTKRETESEAEVYTEAQKQSMEEEARF 82
Query: 59 QTLKREFKMFRRAVAAKSGDP---LVGKPWERIERLKFRQLAS--ESKEFAGDNLKRENL 113
QTL+RE+K F R+++ KSG +VG PWE IER+K ++L S +E +G LK+ENL
Sbjct: 83 QTLRREYKQFTRSISGKSGGDVGLMVGNPWEGIERVKLKELVSGVRREEVSGGELKKENL 142
Query: 114 RELKEMFEKDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAK 173
+ELK++ EKDL WVL+DDV + + + + E+ P KRWR+E EA+RVLVDRLS RE+T K
Sbjct: 143 KELKKILEKDLRWVLEDDVDV--EEYDLDKEFDPAKRWRTEGEAVRVLVDRLSGREITEK 200
Query: 174 NWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTK 233
+WKFVRIMNQSGL F+E QMLK++ LG K SW+QA +V+ WVY K ++ +SRFVYTK
Sbjct: 201 HWKFVRIMNQSGLQFSEDQMLKIVDRLGRKNSWKQASAVVHWVYSDKKRKHNRSRFVYTK 260
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LL++LG A RP EAL+IF+ ML D LYPD+AAYHS+AVTLGQ GLLKEL+K+IE MRQK
Sbjct: 261 LLSVLGFARRPKEALQIFSEMLGDRQLYPDMAAYHSIAVTLGQAGLLKELLKVIEHMRQK 320
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
P+K +KN+ ++NWD VLEPDLVVYNA+LNACVP+ QWK V WVF +LRK+GL+P+ ATYG
Sbjct: 321 PTKLMKNLRQRNWDHVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYG 380
Query: 354 LAME------SYRRC-----------------LLKVLVRAFWEEGKINEAVAAVRNMEQR 390
LAME Y R KVLVRA W EGKI EAV AVR+MEQ+
Sbjct: 381 LAMEVMLESGKYDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQK 440
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
GV+GT SVYYELACCLCNNGRW+DAML V ++K L + +PLEITFTGLI +S++GGH+DD
Sbjct: 441 GVIGTGSVYYELACCLCNNGRWRDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDD 500
Query: 451 CISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 510
C++IFQ+MKD C+PNIGT N ML+VY RNDMFS+AKELFEE +S L
Sbjct: 501 CMAIFQYMKDKCDPNIGTANMMLRVYGRNDMFSEAKELFEE----------IVSRKETHL 550
Query: 511 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
P+EYTY+ MLEASA + QWEYFE+VY+ M LSG Q+DQ KHA +L+EASRAGK
Sbjct: 551 VPNEYTYNFMLEASARSLQWEYFEHVYQLMILSGYQMDQAKHASMLIEASRAGKV 605
>gi|224097262|ref|XP_002310894.1| predicted protein [Populus trichocarpa]
gi|222853797|gb|EEE91344.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/511 (65%), Positives = 395/511 (77%), Gaps = 34/511 (6%)
Query: 80 LVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFEKDLNWVLDDDVQLGSDYF 139
LVGKPWERIER+K +++ S S+EF G LKRENLR+LKE+FE +L WV DDD+ + +
Sbjct: 1 LVGKPWERIERVKLKEIGSGSREFNGGKLKRENLRQLKEVFEGNLKWVFDDDIDVEDSDW 60
Query: 140 AKNV---EWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKL 196
++ +W P KRWR E EAIR LVDRLS RE++ K+WK +IM QSGL F+EGQ+LK+
Sbjct: 61 LRSGSEEKWDPAKRWRGEGEAIRFLVDRLSCREVSVKDWKLAKIMKQSGLRFSEGQLLKI 120
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
++ LG+KG W QAM+V++WVY K++RD KSRFVYTKLL++LGK R EAL IFNLM E
Sbjct: 121 VEELGNKGKWSQAMAVVEWVYNDKERRDCKSRFVYTKLLSVLGKERRAQEALSIFNLMRE 180
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
D +YPD+AAYHS+AVTLGQ GLLKELVK+IE MRQKPSKRI M KNWDPVLEPDLV+
Sbjct: 181 DRRIYPDMAAYHSIAVTLGQTGLLKELVKVIECMRQKPSKRINKMLNKNWDPVLEPDLVI 240
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM-------------------- 356
YNA+LNACVPS QWKGV WVF+QLR+SGLKP+ ATYGLAM
Sbjct: 241 YNAILNACVPSQQWKGVSWVFQQLRRSGLKPNGATYGLAMEVMLLSGKYKSVHEYFRKMK 300
Query: 357 ---ESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
ES + KVLVRAFWEEG++NEAV AVR+MEQRGVVG ASVYYELACCLC NGRWQ
Sbjct: 301 KSGESLKALTYKVLVRAFWEEGRVNEAVEAVRDMEQRGVVGAASVYYELACCLCYNGRWQ 360
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAML 473
DAML VEK+K LR+ KPLE++ TG+I SSMDGGHID+CISIF+HMK HC PNIGT+N ML
Sbjct: 361 DAMLEVEKMKRLRYKKPLEVSLTGMIASSMDGGHIDNCISIFEHMKAHCVPNIGTINTML 420
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
KVYSR+D+FS+AKELFE+ + SG T + PD YTYSSMLE SA A QWEYF
Sbjct: 421 KVYSRSDLFSEAKELFEDIKGVDHSGTTII--------PDGYTYSSMLEVSARALQWEYF 472
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
EYVYK M+ SG QLDQ KHA LLVEASR+GK
Sbjct: 473 EYVYKEMSFSGYQLDQIKHAPLLVEASRSGK 503
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 97/215 (45%), Gaps = 7/215 (3%)
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
M+Q G+ + ++ L N G+W AM VVE + + + + + F + S+ G
Sbjct: 105 MKQSGLRFSEGQLLKIVEELGNKGKWSQAMAVVEWVYNDKERRDCKSRFVYTKLLSVLGK 164
Query: 447 --HIDDCISIFQHMKD--HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT- 501
+ +SIF M++ P++ +++ + + + ++ E + S
Sbjct: 165 ERRAQEALSIFNLMREDRRIYPDMAAYHSIAVTLGQTGLLKELVKVIECMRQKPSKRINK 224
Query: 502 FLSGDGAP-LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
L+ + P L+PD Y+++L A + QW+ +V++ + SG + + + +
Sbjct: 225 MLNKNWDPVLEPDLVIYNAILNACVPSQQWKGVSWVFQQLRRSGLKPNGATYGLAMEVML 284
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
+GK + F + ++GE L + ++L++A
Sbjct: 285 LSGKYKSVHEYFRKMKKSGESLKALTY-KVLVRAF 318
>gi|357121315|ref|XP_003562366.1| PREDICTED: pentatricopeptide repeat-containing protein At5g67570,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/715 (47%), Positives = 458/715 (64%), Gaps = 56/715 (7%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAKIQSQAQLSPSQQQALA--EEQHFQ 59
E ++++LL+ GV PTPKIL ++RKKE K R+ K S A P+ + +L EE F+
Sbjct: 34 ETLRRRLLRKGVSPTPKILHTLRKKEAHKSLRRARKDTSTANAPPTTEDSLVAQEEARFR 93
Query: 60 TLKREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEM 119
E+++ L+G+PW+ AS + E L L+EM
Sbjct: 94 AAAEEYRV------------LMGRPWDG---------ASSASGPPRGTTGNEGLGGLREM 132
Query: 120 FEK----DLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEA----EAIRVLVDRLSEREMT 171
E + W+L+DDV+ G A + W SE I +LV RLSE +++
Sbjct: 133 LEARRSDGVRWLLEDDVEKGEADDANRKQRRVGSGWISEVGDEERRIELLVSRLSEGDLS 192
Query: 172 AKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVY 231
+W+ R+M Q+ L++ E +L++LK L +G+WRQA++V +WVY + +SRFVY
Sbjct: 193 LGDWRLSRMMKQADLIYNEDNLLQILKRLETQGNWRQAVAVTEWVYNENTYKHRRSRFVY 252
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
TKLL+ILGK+ P EALR+F +ML D +YPD+AAYHS+AVTLG+ GLL EL+K+I+ MR
Sbjct: 253 TKLLSILGKSLVPTEALRVFKIMLGDAQIYPDMAAYHSIAVTLGRAGLLNELIKIIDYMR 312
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
QKPSKR+ M RK+WDP+LEPDL++YN+VLNACV S QWKGVFWVFK++R GL P+ AT
Sbjct: 313 QKPSKRVMRMRRKDWDPLLEPDLIIYNSVLNACVLSQQWKGVFWVFKKMRFGGLTPTGAT 372
Query: 352 YGLAMESY-----------------------RRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+GLAME R KVLVRAFWE+GK+NEAV AV +ME
Sbjct: 373 FGLAMEVMLKAKKYDFVQKFFEKMQRKGVPPRAITYKVLVRAFWEQGKVNEAVEAVEDME 432
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
QRG+VG ASVYYELACCLCN G+W++AML VEK++ LR +KPLE FTG+I++S DGG++
Sbjct: 433 QRGIVGAASVYYELACCLCNKGKWKEAMLQVEKLEQLRLTKPLEYVFTGMILASFDGGYM 492
Query: 449 DDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
+CISIF+ MKD+C PNIGT+N MLKVY R+DMF KAK+LFE TT + SS ++ D +
Sbjct: 493 SECISIFESMKDYCAPNIGTINVMLKVYGRSDMFVKAKDLFETTTCSFSSSQPYIC-DHS 551
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
L+ D YTYSSMLEASA A QWEYFE Y+ M LS LDQ+K++WLL++ASRAGK +LL
Sbjct: 552 TLQADAYTYSSMLEASAHAQQWEYFENAYRRMILSHHHLDQSKYSWLLIKASRAGKPYLL 611
Query: 569 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
EHA +S+L+ GE P FTE + Q I S+Y + + L+N M+ A + E QW++L +
Sbjct: 612 EHALNSILDRGETPDVQLFTENVCQTIAHSDYGRTLCLLNFMSAASVDVNELQWSDLLQQ 671
Query: 629 NEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFG 683
N R S + L+ LL L + + +S RAL + + E+D S A G
Sbjct: 672 NMFRFSVNALKDLLMHLSTGDTIERDPALS-FVRALQSQYATFVEKDTSFLADCG 725
>gi|242040507|ref|XP_002467648.1| hypothetical protein SORBIDRAFT_01g031600 [Sorghum bicolor]
gi|241921502|gb|EER94646.1| hypothetical protein SORBIDRAFT_01g031600 [Sorghum bicolor]
Length = 872
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 376/870 (43%), Positives = 515/870 (59%), Gaps = 94/870 (10%)
Query: 12 GVFPTPKILRSIRKKEIQKHNRKQAK-----IQSQAQLSPSQQQALAEEQHFQTLKREFK 66
GV PTPK+L +IRKKE K R+ K + A L+P ++ AE++
Sbjct: 50 GVSPTPKVLHTIRKKEALKALRRARKDTAAAAAAAASLNPCGEEIGAEDEEEAR------ 103
Query: 67 MFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFEKDL-N 125
AA LVG+PW+ R + + + + E LRE+ D+
Sbjct: 104 ---FRAAAAEYRALVGRPWDAGARG-----VAPPRGWDAEEGGLEGLREMLVARRGDVFR 155
Query: 126 WVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEA----IRVLVDRLSEREMTAKNWKFVRIM 181
W+LDDD++ +D + + P W +AE I++LV RL+ ++ ++W+ R+M
Sbjct: 156 WLLDDDIE--ADAAERKQQKRPGTGWDVDAEEEERRIQLLVSRLNGDYLSFRDWRLTRMM 213
Query: 182 NQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKA 241
++ ++++E +L++L GL +G+WRQA++V++WVY R KSRFVYTKLL++LGK+
Sbjct: 214 KKADIIYSEDNLLRILDGLEARGNWRQALAVIEWVYNENSYRHRKSRFVYTKLLSVLGKS 273
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
R +EALR+F +M D +YPD+ AYHS+AVTLG+ GLLKEL+K+IE MRQKPSKR+ NM
Sbjct: 274 LRANEALRVFTIMRRDPQIYPDMPAYHSIAVTLGRAGLLKELIKIIEYMRQKPSKRVMNM 333
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY-- 359
RK WDP LEPD++VYN+VLNACV S QWKGVFWVF+Q+R SGL P+ AT+GLAME
Sbjct: 334 RRKGWDPSLEPDVLVYNSVLNACVLSQQWKGVFWVFQQMRISGLPPTGATFGLAMEVMLK 393
Query: 360 ---------------------RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
R KVLVRAFWE+GKINEAV AV +MEQRGVVG ASV
Sbjct: 394 AKKYDFVQKFYEKMQKNGVPPRAITYKVLVRAFWEQGKINEAVEAVNDMEQRGVVGAASV 453
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
YYELACCLCNN RW+DAML VEK+K L +KPLE TFTG+I++S +GG+I DCISIF+ M
Sbjct: 454 YYELACCLCNNRRWRDAMLQVEKLKQLPLTKPLEYTFTGMILASFNGGYIYDCISIFESM 513
Query: 459 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
KDHC PNIGTVN MLKVY R DMF KAK+LFE T S+ T++ + + LK D YTYS
Sbjct: 514 KDHCTPNIGTVNVMLKVYGRCDMFGKAKDLFETTKACFSNSQTYIH-EHSSLKADTYTYS 572
Query: 519 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 578
SMLEASA+A QWEYFEYVY+ M LS LDQ+K++WLL++A RAGK +LLEHA DS+LE
Sbjct: 573 SMLEASASAQQWEYFEYVYREMVLSHHCLDQSKYSWLLIKACRAGKSNLLEHALDSILER 632
Query: 579 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKL 638
GEIP TE++ Q+I +Y + + L+N M A + E +W L + N + + D L
Sbjct: 633 GEIPDVQLITELICQSIAHRDYRRTLQLLNIMTEASIKMKEVEWVYLLQKNVYQFNIDAL 692
Query: 639 EKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPLHGIHEA 698
E + L +++ + L RAL + C I+ + G +
Sbjct: 693 EGFIKYLSTSGTINADPAL-GLVRALESQC-------------------GITLVKGPYLL 732
Query: 699 FDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSINHSSLSRQADADTEMFSKA 758
D T+ S + E+ D A K D + +++ + D+D E+
Sbjct: 733 TDDTTTQQCGLS----LLESEDKYASSSLAKQD-QLTCENLCTDIILDVPDSDREIPQFG 787
Query: 759 LSYIHSNDRPSNLCIDMEGLADDWASSEHSDYLDKELAALYLSKQSQDNDVVD-LQKSMN 817
+S + S D + + + L D EHSD L +Q +D + SMN
Sbjct: 788 VSVVMSRD----ISLSGQRLED---KHEHSD----------LGQQRPQVSAIDEVLDSMN 830
Query: 818 RVGGSRRSELPSASEILEAWKESREKDGIF 847
G + E+PSASEILE W++ R +G+F
Sbjct: 831 PYGVNSYEEMPSASEILELWEQER-INGMF 859
>gi|326511679|dbj|BAJ91984.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528463|dbj|BAJ93413.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 844
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 334/708 (47%), Positives = 456/708 (64%), Gaps = 60/708 (8%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAK-IQSQAQLSPSQQQALA--EEQHF 58
E ++++LL+ GV TPKIL ++RKKE K R+ K + +P ++ AL EE F
Sbjct: 38 ETLRRRLLRKGVSATPKILHALRKKEAGKSLRRARKEAATATATAPPKEDALVAEEEARF 97
Query: 59 QTLKREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKE 118
+ E+++ L+G+PW R + + +G++ L L++
Sbjct: 98 RAAAEEYRV------------LMGRPWH-----GARGVVGPPRAASGED----GLVGLRK 136
Query: 119 MFEKD----LNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEA----EAIRVLVDRLSEREM 170
M E+ W+LD DV+ A+ + W SE I +LV RL+E ++
Sbjct: 137 MLEERSGDRFQWLLDGDVENEGVEDARGKQRRVGSGWISEVGDEERRIELLVSRLNEVDL 196
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
++ +W+ R+M Q+ L++ E +L++LKGL KG+WRQA++V +WVY + +SRFV
Sbjct: 197 SSGDWRLTRMMKQADLIYNEDNLLQILKGLEAKGNWRQAVAVTEWVYNENSYKHRRSRFV 256
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YTKLL+ILGKA P EALRIF +M D +YPD+AAYHS+AVTLG+ GLL EL+K+I+ M
Sbjct: 257 YTKLLSILGKAWMPTEALRIFTIMRGDAQIYPDMAAYHSIAVTLGRAGLLNELIKIIDYM 316
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
RQKPSKR+ M RK+WDP+LEPD++VYN+VLNACV S QWKGVFWVF+++R GL P+ A
Sbjct: 317 RQKPSKRVMMMRRKDWDPLLEPDVLVYNSVLNACVLSQQWKGVFWVFQKMRFGGLTPTGA 376
Query: 351 TYGLAMESY-----------------------RRCLLKVLVRAFWEEGKINEAVAAVRNM 387
T+GLAME R KVLVRAFWE+GK+NEAV AV++M
Sbjct: 377 TFGLAMEVMLKSKKYEFVQKFFEKMQRKGVPPRAITYKVLVRAFWEQGKVNEAVEAVKDM 436
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
EQRGVVG A+VYYELACCLCN GRW+DAML VEK++ R +KPLE FTG+I++S DGG+
Sbjct: 437 EQRGVVGAATVYYELACCLCNKGRWKDAMLQVEKMEQFRLTKPLEFAFTGMILASFDGGY 496
Query: 448 IDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
I +CISIF+ MKD+C PNIGT+N MLKVY R DMF KAK+LFE TT S + G
Sbjct: 497 ISECISIFESMKDYCTPNIGTINVMLKVYGRCDMFGKAKDLFETTT---CSSQPHIRGHS 553
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
+ LK D YTYSS+LEASA+A QWEYFE VY+ M LS LDQ+K++WLL++ASRAGK +L
Sbjct: 554 S-LKVDVYTYSSILEASASAQQWEYFENVYRKMTLSQHHLDQSKYSWLLIKASRAGKPYL 612
Query: 568 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 627
+EHA DS+LE GEIP FTE + Q I +S+Y + + L+N M+ A ++ E+QW++L
Sbjct: 613 VEHALDSILERGEIPDVELFTENICQTIAESDYGRTLHLMNTMSAASVNMNEQQWSDLLL 672
Query: 628 SNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 675
N R L+ L+ L +A ++ S RAL + C + +D
Sbjct: 673 QNSHRFRVHGLKDLITHLSTSDAIKTDPGHS-FVRALQSQCATMLAKD 719
>gi|385269624|gb|AFI56571.1| PPR8522 [Zea mays]
gi|414874088|tpg|DAA52645.1| TPA: hypothetical protein ZEAMMB73_282844 [Zea mays]
Length = 832
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 369/868 (42%), Positives = 505/868 (58%), Gaps = 101/868 (11%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAKIQSQAQLSPSQQQALAEEQHFQTL 61
E ++++ L+ GV PTPKIL ++RKKE K R+ A+ + A + S+ EE F+
Sbjct: 38 ETLRRRFLRRGVSPTPKILHTLRKKEALKALRR-ARKDTAAAATASRNPCDEEETRFRAA 96
Query: 62 KREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFE 121
E+ L G+PW+ R + + G+ E LRE+
Sbjct: 97 AAEYHA------------LAGRPWDAGTRG-----MAPPRGLDGEEGGLEGLREMLAARR 139
Query: 122 KD-LNWVLDDDVQLGSDYFAKNVEWHPEKRW----RSEAEAIRVLVDRLSEREMTAKNWK 176
D W+LDDD++ ++ + + P W E I++LV RL+ ++ ++W+
Sbjct: 140 GDGFRWLLDDDIE--AEAAERKQQRRPGAGWDVGTEDEERRIQLLVSRLNGDYLSFRDWR 197
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
R+M ++ ++++E +L++L GL +G+WRQA+S+++WVY R KSRFVYTKLL+
Sbjct: 198 LTRVMKRADIIYSEDNLLRILDGLEARGNWRQALSIIEWVYNENSYRHRKSRFVYTKLLS 257
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
ILGK+ R EAL IF +M D +YPD+ AYH +AVTLG+ GLLKEL+K+IE MRQKPSK
Sbjct: 258 ILGKSLRATEALHIFTIMRGDAQIYPDMPAYHCIAVTLGRAGLLKELIKIIEYMRQKPSK 317
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+ M RK+WDP LEPD++VYN+VLNACV S QWKGVFWVF+Q+R GL P+ ATYGLAM
Sbjct: 318 LVMKMRRKDWDPSLEPDVLVYNSVLNACVLSQQWKGVFWVFQQMRIGGLPPTGATYGLAM 377
Query: 357 ESY-----------------------RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
E R KVLVR+FWE+ KINEAV AV +MEQRGVV
Sbjct: 378 EVMLKAKKYDFVQKFYEKMQKNGVPPRAITYKVLVRSFWEQDKINEAVEAVNDMEQRGVV 437
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
G ASVYYELACCLCNNGRW+DAML VEK+K L +KPLE FTG+I++S +GG+I DCIS
Sbjct: 438 GAASVYYELACCLCNNGRWRDAMLQVEKLKQLPLTKPLEYAFTGMILASFNGGYIYDCIS 497
Query: 454 IFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 513
IF+ MKDHC PNIGTVN MLKVY DMF KAK+LFE T + T++ + + K D
Sbjct: 498 IFELMKDHCMPNIGTVNVMLKVYGHCDMFGKAKDLFETTKACFLNSQTYIH-EHSSFKAD 556
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
YTY+SMLEASA+A QWEYFEYVY+ MALS LDQ+K++WLL++A RAGK +LLEHA D
Sbjct: 557 TYTYNSMLEASASAQQWEYFEYVYREMALSHHCLDQSKYSWLLIKACRAGKPYLLEHALD 616
Query: 574 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRI 633
S+LE GEIP TE + Q+I +Y + + L+N M A I E +W L + N +
Sbjct: 617 SILERGEIPDVQLITESICQSIAHRDYGRTLQLLNIMTQASIKIKEVEWDYLLQQNMHQF 676
Query: 634 SRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPLH 693
S D LE L+ L + N ++ +L RAL + CR + +Q ++S H
Sbjct: 677 SIDALEGLIKYL-STNGTTNADPAVDLVRALQSQCRDDT----------STQQFELS-FH 724
Query: 694 GIHEAFDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSINHSSLSRQADADTE 753
G + S S + E L L TD+ +D+ +D E
Sbjct: 725 GSGNKY-----------SCSSLAELDQLTCKNLC--TDIILDVPG-----------SDRE 760
Query: 754 MFSKALSYIHSNDRPSNLCIDMEGLADDWASSEHSDYLDKELAALYLSKQSQDNDVVDLQ 813
M +S + +C D+ L ++H EL+ L + Q + + +
Sbjct: 761 MPQLGVSAL--------MCRDI-SLNGQRVENKH------ELSDLG-QRGPQVSAIDKVL 804
Query: 814 KSMNRVGGSRRSELPSASEILEAWKESR 841
SMN G + E+PSAS+ILE W+ R
Sbjct: 805 DSMNSYGDNSYGEMPSASKILELWEHER 832
>gi|115463141|ref|NP_001055170.1| Os05g0315100 [Oryza sativa Japonica Group]
gi|113578721|dbj|BAF17084.1| Os05g0315100 [Oryza sativa Japonica Group]
gi|222631083|gb|EEE63215.1| hypothetical protein OsJ_18025 [Oryza sativa Japonica Group]
Length = 874
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 374/884 (42%), Positives = 517/884 (58%), Gaps = 96/884 (10%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAK-IQSQAQLSPSQQQALAEEQHFQT 60
E ++++LL+ GV PTPKIL ++RKKE K R+ K + A + + AL E+
Sbjct: 37 ETLRRRLLRKGVSPTPKILHALRKKEALKSLRRARKDTAAAAAAAEAASNALPREEDGAA 96
Query: 61 LKREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRE-LKEM 119
+ E R A L+G+PW A G+ + LRE L
Sbjct: 97 VVGEDDEARFRAAVAEYRALMGRPWHGGAS------APPRGALRGEGEGLDGLREMLAAR 150
Query: 120 FEKDLNWVLDDDVQLGSDYFAK-------NVEWHPEKRWRSEAEAIRVLVDRLSEREMTA 172
W+L+DD + A V W+ + +R E I LV RL+E +++
Sbjct: 151 RAGKFEWLLEDDDVEEGEEEAAVGRRGRAGVGWNSD--FRDEERRIESLVRRLNEDDLSM 208
Query: 173 KNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYT 232
++W+ R+M ++ L++ E +L++L+GL +G+WRQA+SV +WVY + KSRFVYT
Sbjct: 209 RDWRLTRLMKKADLIYNEDNLLQILEGLEARGNWRQALSVTEWVYNENIYKHRKSRFVYT 268
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
KLL+ILGKA RP EALR+F +M D +YPD+AAYHS+AVTLG+ GLL EL+K+IE MRQ
Sbjct: 269 KLLSILGKAWRPTEALRVFTIMRSDAQIYPDMAAYHSIAVTLGRAGLLNELIKIIEYMRQ 328
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
KPSKR+ M RK+WDP LEPD+++YN+VLNACV S QWKGVFWVF+Q+R++ L P+ AT+
Sbjct: 329 KPSKRVMKMRRKDWDPSLEPDVLIYNSVLNACVLSQQWKGVFWVFQQMRRNSLIPTGATF 388
Query: 353 GLAMESY-----------------------RRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
GLAME R KVLVRA+WE+GK+NEAV AV++MEQ
Sbjct: 389 GLAMEVMLKAKKYDFVQKFFQKMQKSGVPPRAITYKVLVRAYWEQGKVNEAVEAVKDMEQ 448
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
RG+VG ASVYYELACCLCN GRW+DA+ VEK+K L +KPLE TFTG+I++S DGG+I
Sbjct: 449 RGIVGAASVYYELACCLCNKGRWRDALSQVEKLKQLPLTKPLEFTFTGMILASFDGGYIS 508
Query: 450 DCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
+CISIF+ M+ HC PNIGT+N M+KVY R DMF KA++LF ET + N S + +
Sbjct: 509 ECISIFESMEGHCAPNIGTINVMIKVYGRCDMFVKARDLF-ETIKVN-----LPSSNHSS 562
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
K D YTYSSMLEA+A+A QWEYFE VY+ M LS LDQ+K++W+L++AS+AGK +LLE
Sbjct: 563 HKADAYTYSSMLEAAASAQQWEYFENVYREMTLSQYHLDQSKYSWMLIKASKAGKSYLLE 622
Query: 570 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESN 629
HA DS+LE GE P+ F+EM+ Q I Q NY K + LIN MA A ++E QW++L E N
Sbjct: 623 HALDSILERGETPNVQLFSEMICQTIAQRNYAKTLHLINIMAEASTDVSELQWSKLLEQN 682
Query: 630 EDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSA---HFGSQA 686
R S + L+ LL L + S+ + +S AL + C + D S A + G
Sbjct: 683 MHRFSVNALKDLLKYLSTSDIIKSDPELCFVS-ALQSQCGTTFVNDTSFVADGTYTGQSQ 741
Query: 687 IDISPLHGIHEAFDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSIN-HSSLS 745
+ + EN+ SS S ++D ++ +SL+
Sbjct: 742 LSLP--------------ENITKSSNS---------------------NLDQLSCMNSLN 766
Query: 746 RQADADTEMFSKALSYIHSNDRPSNLCIDMEGLADDWASSEHSDYLDKELAAL--YLSKQ 803
D ++ S+ YI + + GL++D H + KE L +
Sbjct: 767 TNVFPDEKVSSEFSDYIMNTPQSDA----NAGLSEDIVIGSHFESEQKEQHDLGWLGTGV 822
Query: 804 SQDNDVVDLQKSMNRVGGSRRSELPSASEILEAWKESREKDGIF 847
S ++V+D SMN G E+PSASEILE W++ R +G F
Sbjct: 823 SAVDEVLD---SMNLYGDGSCGEMPSASEILELWEQDR-INGTF 862
>gi|125551793|gb|EAY97502.1| hypothetical protein OsI_19428 [Oryza sativa Indica Group]
Length = 874
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 373/887 (42%), Positives = 518/887 (58%), Gaps = 102/887 (11%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAK-IQSQAQLSPSQQQALAEEQHFQT 60
E ++++LL+ GV PTPKIL ++RKKE K R+ K + A + + AL E+
Sbjct: 37 ETLRRRLLRKGVSPTPKILHALRKKEALKSLRRARKDTAAAAAAAEAASNALPREEDGAA 96
Query: 61 LKREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMF 120
+ E R A L+G+PW + + + E L L+EM
Sbjct: 97 VVGEDDEARFRAAVAEYRALMGRPWHG---------GASTPPRGALRGEGEGLDGLREML 147
Query: 121 EK----DLNWVLDDDVQLGSDYFAK-------NVEWHPEKRWRSEAEAIRVLVDRLSERE 169
W+L+DD + A V W+ + +R E I LV RL+E +
Sbjct: 148 AARRAGKFEWLLEDDDVEEGEEEAAVGRRGRAGVGWNSD--FRDEERRIESLVRRLNEDD 205
Query: 170 MTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF 229
++ ++W+ R+M ++ L++ E +L++L+GL +G+WRQA+SV +WVY + KSRF
Sbjct: 206 LSMRDWRLTRLMKKADLIYNEDNLLQILEGLEARGNWRQALSVTEWVYNENIYKHRKSRF 265
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VYTKLL+ILGKA RP EALR+F +M D +YPD+AAYHS+AVTLG+ GLL EL+K+IE
Sbjct: 266 VYTKLLSILGKAWRPTEALRVFTIMRSDAQIYPDMAAYHSIAVTLGRAGLLNELIKIIEY 325
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
MRQKPSKR+ M RK+WDP LEPD+++YN+VLNACV S QWKGVFWVF+Q+R++ L P+
Sbjct: 326 MRQKPSKRVMKMRRKDWDPSLEPDVLIYNSVLNACVLSQQWKGVFWVFQQMRRNSLIPTG 385
Query: 350 ATYGLAMESY-----------------------RRCLLKVLVRAFWEEGKINEAVAAVRN 386
AT+GLAME R KVLVRA+WE+GK+NEAV AV++
Sbjct: 386 ATFGLAMEVMLKAKKYDFVQKFFQKMQKSGVPPRAITYKVLVRAYWEQGKVNEAVEAVKD 445
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
MEQRG+VG ASVYYELACCLCN GRW+DA+ VEK+K L +KPLE TFTG+I++S DGG
Sbjct: 446 MEQRGIVGAASVYYELACCLCNKGRWRDALSQVEKLKQLPLTKPLEFTFTGMILASFDGG 505
Query: 447 HIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
+I +CISIF+ M+ HC PNIGT+N M+KVY R DMF KA++LF ET + N S +
Sbjct: 506 YISECISIFESMEGHCAPNIGTINVMIKVYGRCDMFVKARDLF-ETIKVN-----LPSSN 559
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
+ K D YTYSSMLEA+A+A QWEYFE VY+ M LS LDQ+K++W+L++AS+AGK +
Sbjct: 560 HSSHKADAYTYSSMLEAAASAQQWEYFENVYREMTLSQYHLDQSKYSWMLIKASKAGKSY 619
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 626
LLEHA DS+LE GE P+ F+EM+ Q I Q NY K + LIN MA A ++E QW++L
Sbjct: 620 LLEHALDSILERGETPNVQLFSEMICQTIAQRNYAKTLHLINIMAEASTDVSELQWSKLL 679
Query: 627 ESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSA---HFG 683
E N R S + L+ LL L + S+ + +S AL + C + D S A + G
Sbjct: 680 EQNMHRFSVNALKDLLKYLSTSDIIKSDPELCFVS-ALQSQCGTTFVNDTSFVADGTYTG 738
Query: 684 SQAIDISPLHGIHEAFDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSIN-HS 742
+ + EN+ SS S ++D ++ +
Sbjct: 739 QSQLSLP--------------ENITKSSNS---------------------NLDQLSCMN 763
Query: 743 SLSRQADADTEMFSKALSYIHSNDRPSNLCIDMEGLADDWASSEHSDYLDKELAAL--YL 800
SL+ D ++ S+ YI + + GL++D H + KE L
Sbjct: 764 SLNTNVFPDEKVSSEFSDYIMNTPQSDA----NAGLSEDIVIGSHFESEQKEQHDLGWLG 819
Query: 801 SKQSQDNDVVDLQKSMNRVGGSRRSELPSASEILEAWKESREKDGIF 847
+ S ++V+D SMN G E+PSASEILE W++ R +G F
Sbjct: 820 TGVSAVDEVLD---SMNLYGDGSCGEMPSASEILELWEQDR-INGTF 862
>gi|9757878|dbj|BAB08465.1| unnamed protein product [Arabidopsis thaliana]
Length = 505
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 318/510 (62%), Positives = 385/510 (75%), Gaps = 37/510 (7%)
Query: 80 LVGKPWERIERLKFRQLAS--ESKEFAGDNLKRENLRELKEMFEKDLNWVLDDDVQLGSD 137
+VG PWE IER+K ++L S +E + LK+ENL+ELK++ EKDL WVLDDDV +
Sbjct: 1 MVGNPWEGIERVKLKELVSGVRREEVSAGELKKENLKELKKILEKDLRWVLDDDVDVEEF 60
Query: 138 YFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLL 197
K E+ P KRWR+E EA+RVLVDRLS RE+ K+WKFVR+MNQSGL FTE QMLK++
Sbjct: 61 DLDK--EFDPAKRWRNEGEAVRVLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIV 118
Query: 198 KGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLED 257
LG K SW+QA +V+ WVY K ++ L+SRFVYTKLL++LG A RP EAL+IFN ML D
Sbjct: 119 DRLGRKQSWKQASAVVHWVYSDKKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGD 178
Query: 258 CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVY 317
LYPD+AAYH +AVTLGQ GLLKEL+K+IERMRQKP+K KN+ +KNWDPVLEPDLVVY
Sbjct: 179 RQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVY 238
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES-------------YRR--- 361
NA+LNACVP+ QWK V WVF +LRK+GL+P+ ATYGLAME +R+
Sbjct: 239 NAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKS 298
Query: 362 -------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
KVLVRA W EGKI EAV AVR+MEQ+GV+GT SVYYELACCLCNNGRW D
Sbjct: 299 SGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCD 358
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLK 474
AML V ++K L + +PLEITFTGLI +S++GGH+DDC++IFQ+MKD C+PNIGT N MLK
Sbjct: 359 AMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLK 418
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
VY RNDMFS+AKELFEE +S L P+EYTYS MLEASA + QWEYFE
Sbjct: 419 VYGRNDMFSEAKELFEE----------IVSRKETHLVPNEYTYSFMLEASARSLQWEYFE 468
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+VY+ M LSG Q+DQTKHA +L+EASRAGK
Sbjct: 469 HVYQTMVLSGYQMDQTKHASMLIEASRAGK 498
>gi|110738632|dbj|BAF01241.1| hypothetical protein [Arabidopsis thaliana]
Length = 508
Score = 537 bits (1383), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/428 (60%), Positives = 323/428 (75%), Gaps = 34/428 (7%)
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+AAYH +AVTLGQ GLLKEL+K+IERMRQKP+K KN+ +KNWDPVLEPDLVVYNA+LNA
Sbjct: 1 MAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNA 60
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES-------------YRR--------- 361
CVP+ QWK V WVF +LRK+GL+P+ ATYGLAME +R+
Sbjct: 61 CVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPK 120
Query: 362 -CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
KVLVRA W EGKI EAV AVR+MEQ+GV+GT SVYYELACCLCNNGRW DAML V
Sbjct: 121 AITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVG 180
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRND 480
++K L + +PLEITFTGLI +S++GGH+DDC++IFQ+MKD C+PNIGT N MLKVY RND
Sbjct: 181 RMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRND 240
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
MFS+AKELFEE +S L P+EYTYS MLEASA + QWEYFE+VY+ M
Sbjct: 241 MFSEAKELFEE----------IVSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTM 290
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 600
LSG Q+DQTKHA +L+EASRAGK LLEHAFD++LE GEIPHPLFFTE+L A + ++
Sbjct: 291 VLSGYQMDQTKHASMLIEASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKGDF 350
Query: 601 EKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNL 660
++A+ LIN +A A F I+E +WT+LFE ++D +++D L KL + L C+ SE TVSNL
Sbjct: 351 QRAITLINTVALASFQISEEEWTDLFEEHQDWLTQDNLHKLSDHLIECDYV-SEPTVSNL 409
Query: 661 SRALHALC 668
S++L + C
Sbjct: 410 SKSLKSRC 417
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 30/246 (12%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
VR M Q G++ T +L L + G W AM + + L++ R L+ F T L+A
Sbjct: 144 VRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITF--TGLIAA 201
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
G + + IF M + C+ P+I + + G+ + E +L E + +
Sbjct: 202 SLNGGHVDDCMAIFQYMKDKCD--PNIGTANMMLKVYGRNDMFSEAKELFEEIVSR---- 255
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG-LAM 356
K H L P+ Y+ +L A S QW+ V++ + SG + + + +
Sbjct: 256 -KETH-------LVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLI 307
Query: 357 ESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
E+ R +L AF +AV + G + + EL C G +Q A+
Sbjct: 308 EASRAGKWSLLEHAF-------DAVL------EDGEIPHPLFFTELLCHATAKGDFQRAI 354
Query: 417 LVVEKI 422
++ +
Sbjct: 355 TLINTV 360
>gi|414874089|tpg|DAA52646.1| TPA: hypothetical protein ZEAMMB73_282844 [Zea mays]
Length = 659
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 293/637 (45%), Positives = 388/637 (60%), Gaps = 92/637 (14%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAKIQSQAQLSPSQQQALAEEQHFQTL 61
E ++++ L+ GV PTPKIL ++RKKE K R+ A+ + A + S+ EE F+
Sbjct: 38 ETLRRRFLRRGVSPTPKILHTLRKKEALKALRR-ARKDTAAAATASRNPCDEEETRFRAA 96
Query: 62 KREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFE 121
E+ L G+PW+ R + + G+ E LRE+
Sbjct: 97 AAEYHA------------LAGRPWDAGTRG-----MAPPRGLDGEEGGLEGLREMLAARR 139
Query: 122 KD-LNWVLDDDVQLGSDYFAKNVEWHPEKRW----RSEAEAIRVLV-------------- 162
D W+LDDD++ ++ + + P W E I++LV
Sbjct: 140 GDGFRWLLDDDIE--AEAAERKQQRRPGAGWDVGTEDEERRIQLLVSRTSIQLVLESNDP 197
Query: 163 ------DRLSERE-----------------------MTAKNWKFVRIMNQSGLMFTEGQM 193
DR+S E ++ ++W+ R+M ++ ++++E +
Sbjct: 198 TLPQPEDRISGVEKGLAGLQPNCGPPWNKKRLNGDYLSFRDWRLTRVMKRADIIYSEDNL 257
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L++L GL +G+WRQA+S+++WVY R KSRFVYTKLL+ILGK+ R EAL IF +
Sbjct: 258 LRILDGLEARGNWRQALSIIEWVYNENSYRHRKSRFVYTKLLSILGKSLRATEALHIFTI 317
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M D +YPD+ AYH +AVTLG+ GLLKEL+K+IE MRQKPSK + M RK+WDP LEPD
Sbjct: 318 MRGDAQIYPDMPAYHCIAVTLGRAGLLKELIKIIEYMRQKPSKLVMKMRRKDWDPSLEPD 377
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY-------------- 359
++VYN+VLNACV S QWKGVFWVF+Q+R GL P+ ATYGLAME
Sbjct: 378 VLVYNSVLNACVLSQQWKGVFWVFQQMRIGGLPPTGATYGLAMEVMLKAKKYDFVQKFYE 437
Query: 360 ---------RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
R KVLVR+FWE+ KINEAV AV +MEQRGVVG ASVYYELACCLCNNG
Sbjct: 438 KMQKNGVPPRAITYKVLVRSFWEQDKINEAVEAVNDMEQRGVVGAASVYYELACCLCNNG 497
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVN 470
RW+DAML VEK+K L +KPLE FTG+I++S +GG+I DCISIF+ MKDHC PNIGTVN
Sbjct: 498 RWRDAMLQVEKLKQLPLTKPLEYAFTGMILASFNGGYIYDCISIFELMKDHCMPNIGTVN 557
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
MLKVY DMF KAK+LFE T + T++ + + K D YTY+SMLEASA+A QW
Sbjct: 558 VMLKVYGHCDMFGKAKDLFETTKACFLNSQTYIH-EHSSFKADTYTYNSMLEASASAQQW 616
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
EYFEYVY+ MALS LDQ+K++WLL++A RAGK +
Sbjct: 617 EYFEYVYREMALSHHCLDQSKYSWLLIKACRAGKVRV 653
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 47/252 (18%), Positives = 100/252 (39%), Gaps = 14/252 (5%)
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYY------ELACCLCNNGRWQDAMLVVEKI--- 422
W + ++N + R+ V+ A + Y + L G W+ A+ ++E +
Sbjct: 224 WNKKRLNGDYLSFRDWRLTRVMKRADIIYSEDNLLRILDGLEARGNWRQALSIIEWVYNE 283
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE--PNIGTVNAMLKVYSRND 480
S RH K +T L+ + + IF M+ + P++ + + R
Sbjct: 284 NSYRHRKS-RFVYTKLLSILGKSLRATEALHIFTIMRGDAQIYPDMPAYHCIAVTLGRAG 342
Query: 481 MFSKAKELFEETTRANSSGYTFLS-GDGAP-LKPDEYTYSSMLEASATAHQWEYFEYVYK 538
+ + ++ E + S + D P L+PD Y+S+L A + QW+ +V++
Sbjct: 343 LLKELIKIIEYMRQKPSKLVMKMRRKDWDPSLEPDVLVYNSVLNACVLSQQWKGVFWVFQ 402
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
M + G + + +A K ++ ++ + + G P + + ++ Q
Sbjct: 403 QMRIGGLPPTGATYGLAMEVMLKAKKYDFVQKFYEKMQKNGVPPRAITYKVLVRSFWEQD 462
Query: 599 NYEKAVALINAM 610
+AV +N M
Sbjct: 463 KINEAVEAVNDM 474
>gi|147858132|emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]
Length = 615
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 273/491 (55%), Positives = 340/491 (69%), Gaps = 33/491 (6%)
Query: 362 CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
C L VLVRAFWEEGK+NEAV VR+ME+RGVVG ASVYYELACCLCNNGRWQDA++ VEK
Sbjct: 8 CNLPVLVRAFWEEGKVNEAVEVVRDMERRGVVGIASVYYELACCLCNNGRWQDAIVEVEK 67
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDM 481
+K HSKPLE+TFTG+I SSMDGGH+DDC+SIF+HMK HC PNIGT+NAMLKVY RNDM
Sbjct: 68 LKKRPHSKPLEVTFTGMITSSMDGGHLDDCLSIFEHMKYHCSPNIGTINAMLKVYGRNDM 127
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
FSKAKELFEET R+ + T + L PD YTYSSMLEASA+AHQWE+FEYVYK M
Sbjct: 128 FSKAKELFEETKRSTFASNTCMDDGSISLVPDLYTYSSMLEASASAHQWEFFEYVYKEMT 187
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 601
LSG QLDQ+KHA LL +ASRAGK HLLEHAFD++LEAGEIPHP FTEM+ QA Q NYE
Sbjct: 188 LSGYQLDQSKHALLLGKASRAGKWHLLEHAFDTILEAGEIPHPSIFTEMICQATAQHNYE 247
Query: 602 KAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLS 661
+AV LINAMA+APF ++E+QWT+LF + +DRISR LEKLL++L NC+ A E TVSNL
Sbjct: 248 RAVTLINAMAHAPFVVSEKQWTDLFVT-DDRISRVNLEKLLDSLHNCDVA-EEATVSNLY 305
Query: 662 RALHALCRSEKERDLSSSAHFGSQAIDISPLHGIHEAFDVKETENVPSSSASMMFENADL 721
++L +LC S D SS A FG +A+ +PL+G D + SA +
Sbjct: 306 KSLQSLCGSGTSMDQSSVA-FGDEAMIRTPLNGNSGELDDNKKVFFQKFSADARGSDLSP 364
Query: 722 GADPLPQKTDVAVDIDSINHS-SLSRQADADTEMFSKALSYIHSNDR-PSNLCIDMEGLA 779
+P + +DV DI S+N + S D D E S+A +Y + D SN ++G
Sbjct: 365 HENPPVKNSDVTFDIFSVNLTRSEEEDDDTDGEAISEAFNYACNGDEVASNEPNTLDG-- 422
Query: 780 DDWASSEHSDYLDKELAALYLSKQSQDNDVVDLQKSMNRVGGSRRSELPSASEILEAWKE 839
+S+ ++K + L+ +++++D S S LPSA+EILE WK+
Sbjct: 423 -------NSEGINK----IELNMRAKEDD-------------SHGSNLPSANEILETWKK 458
Query: 840 SREKD--GIFF 848
SRE+D +FF
Sbjct: 459 SRERDVRPLFF 469
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 114/287 (39%), Gaps = 24/287 (8%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VLV E + + VR M + G++ +L L + G W+ A+ ++ +
Sbjct: 12 VLVRAFWEEGKVNEAVEVVRDMERRGVVGIASVYYELACCLCNNGRWQDAIVEVEKLKKR 71
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ L+ F T ++ G + L IF M C+ P+I +++ G+ +
Sbjct: 72 PHSKPLEVTF--TGMITSSMDGGHLDDCLSIFEHMKYHCS--PNIGTINAMLKVYGRNDM 127
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ +L E ++ S N + L PDL Y+++L A +HQW+ +V+K+
Sbjct: 128 FSKAKELFEETKR--STFASNTCMDDGSISLVPDLYTYSSMLEASASAHQWEFFEYVYKE 185
Query: 340 LRKSGLKPSAATYGLAMESYRRC----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+ SG + + + L + R LL+ E G+I + Q T
Sbjct: 186 MTLSGYQLDQSKHALLLGKASRAGKWHLLEHAFDTILEAGEIPHPSIFTEMICQ----AT 241
Query: 396 ASVYYELACCLCN----------NGRWQDAMLVVEKIKSLRHSKPLE 432
A YE A L N +W D + ++I + K L+
Sbjct: 242 AQHNYERAVTLINAMAHAPFVVSEKQWTDLFVTDDRISRVNLEKLLD 288
>gi|147858133|emb|CAN83935.1| hypothetical protein VITISV_035769 [Vitis vinifera]
Length = 490
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/363 (58%), Positives = 276/363 (76%), Gaps = 18/363 (4%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAKIQSQAQLSPSQQQALAEEQHFQTL 61
EKIK+ L++ GV+PTPKI+ ++RKKEIQK RK ++ +Q Q SP++ + + EE HF+TL
Sbjct: 15 EKIKRNLIRKGVYPTPKIIHTLRKKEIQKSIRKSKRLANQNQ-SPTEDEEVNEEAHFRTL 73
Query: 62 KREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFE 121
KRE+ +A+ +VGKPWER F+++ + S E+ G+ LKRE+LREL E+ E
Sbjct: 74 KREYTKLSKAL-------MVGKPWERP---GFKEILNGSVEYGGERLKREHLRELSEILE 123
Query: 122 K--DLNWVLDDDVQL--GSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKF 177
K ++ W+LDDDV++ GS + W P +R +A+AIR LVDRL+ ++T ++WKF
Sbjct: 124 KRGEVRWLLDDDVEVEQGSSGNERR-GWSPARRRGGDADAIRFLVDRLTAADITIRDWKF 182
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDK--RDLKSRFVYTKLL 235
R+M QSGL FTE Q+L++++ LG +G W+ A+SV++WVY KDK R KSRFVYTKLL
Sbjct: 183 SRVMKQSGLQFTERQLLRIVEELGARGHWKHALSVVEWVYTDKDKDNRRYKSRFVYTKLL 242
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
A+LGKA RPHEAL IFNLM DC++YPD+AAYHSVAVTLGQ GLLKEL+ +IE MRQKP
Sbjct: 243 AVLGKAKRPHEALDIFNLMRGDCHIYPDMAAYHSVAVTLGQAGLLKELLNIIECMRQKPP 302
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
KRIKNM RKNW+ +LEPD+V++NAVLNACVP+ QWKGV WVFKQLRK LKP+ ATYGLA
Sbjct: 303 KRIKNMCRKNWNALLEPDVVIFNAVLNACVPTQQWKGVSWVFKQLRKCSLKPNGATYGLA 362
Query: 356 MES 358
MES
Sbjct: 363 MES 365
>gi|62321553|dbj|BAD95068.1| putative protein [Arabidopsis thaliana]
Length = 416
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/332 (59%), Positives = 247/332 (74%), Gaps = 23/332 (6%)
Query: 337 FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
F++++ SG P A TY KVLVRA W EGKI EAV AVR+MEQ+GV+GT
Sbjct: 17 FRKMKSSGEAPKAITY------------KVLVRALWREGKIEEAVEAVRDMEQKGVIGTG 64
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
SVYYELACCLCNNGRW DAML V ++K L + +PLEITFTGLI +S++GGH+DDC++IFQ
Sbjct: 65 SVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQ 124
Query: 457 HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
+MKD C+PNIGT N MLKVY RNDMFS+AKELFEE +S L P+EYT
Sbjct: 125 YMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEE----------IVSRKETHLVPNEYT 174
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
YS MLEASA + QWEYFE+VY+ M LSG Q+DQTKHA +L+EASRAGK LLEHAFD++L
Sbjct: 175 YSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEASRAGKWSLLEHAFDAVL 234
Query: 577 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRD 636
E GEIPHPLFFTE+L A + ++++A+ LIN +A A F I+E +WT+LFE ++D +++D
Sbjct: 235 EDGEIPHPLFFTELLCHATAKGDFQRAITLINTVALASFQISEEEWTDLFEEHQDWLTQD 294
Query: 637 KLEKLLNALCNCNAASSEITVSNLSRALHALC 668
L KL + L C+ SE TVSNLS++L + C
Sbjct: 295 NLHKLSDHLIECDYV-SEPTVSNLSKSLKSRC 325
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 101/246 (41%), Gaps = 30/246 (12%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
VR M Q G++ T +L L + G W AM + + L++ R L+ +T L+A
Sbjct: 52 VRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLE--ITFTGLIAA 109
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
G + + IF M + C+ P+I + + G+ + E +L E + +
Sbjct: 110 SLNGGHVDDCMAIFQYMKDKCD--PNIGTANMMLKVYGRNDMFSEAKELFEEIVSR---- 163
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG-LAM 356
K H L P+ Y+ +L A S QW+ V++ + SG + + + +
Sbjct: 164 -KETH-------LVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLI 215
Query: 357 ESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
E+ R +L AF +AV + G + + EL C G +Q A+
Sbjct: 216 EASRAGKWSLLEHAF-------DAVL------EDGEIPHPLFFTELLCHATAKGDFQRAI 262
Query: 417 LVVEKI 422
++ +
Sbjct: 263 TLINTV 268
>gi|326522626|dbj|BAK07775.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 969
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/558 (37%), Positives = 319/558 (57%), Gaps = 28/558 (5%)
Query: 111 ENLRELKEMFEKDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREM 170
EN+++ K +D V+DD + +V P E I+ L RL+ ++
Sbjct: 374 ENVQQGK-FVRRDSKAVVDDRAAFKTFEAFTDVRNRPRALQMEIEERIQKLASRLNATDV 432
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
WKF ++++ + + FT+ +L++++ LG G+W++ + V++W+ + + KSR++
Sbjct: 433 NTPEWKFSKMIHDAQIKFTDHSILRIVQILGRYGNWKRVLQVVEWLQSRERFKSYKSRYI 492
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT +L +LGKA RP EAL +F MLE + YPDIAAYH +AVTLGQ GL+KEL +I+ M
Sbjct: 493 YTTVLDVLGKAKRPFEALNVFYTMLEQLSSYPDIAAYHCIAVTLGQAGLVKELFDVIDCM 552
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R P K+ +NWDP LEPDL+VYNAVLNACV QW+G FWV +QL++ ++P+
Sbjct: 553 RSPPKKKFMVGPVQNWDPRLEPDLIVYNAVLNACVQQKQWEGTFWVLQQLKEKNIRPTNT 612
Query: 351 TYGLAMESYRRCL----------------------LKVLVRAFWEEGKINEAVAAVRNME 388
TYGL ME C KVLV A W EGKI+EAV AV++ME
Sbjct: 613 TYGLVMEVMLVCGKYNLVYEFFDRVKQKSIPGALNYKVLVNALWREGKIDEAVMAVKDME 672
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
RG+VG+AS+YY+LA CLC+ GR ++A+L VEKI + +KPL +T+TGLI +D G I
Sbjct: 673 NRGIVGSASLYYDLARCLCSGGRCKEALLQVEKICKV-ANKPLVVTYTGLIQICIDSGSI 731
Query: 449 DDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
++ IF+ M ++C PN T N MLK Y + MF AK+L E L
Sbjct: 732 ENAKYIFKEMCNYCSPNNVTCNIMLKSYIDHGMFEDAKDLLENILNGRIRSKADLDQQAI 791
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
D++T+++ L+A A A +W FEY ++ M +G D+ +H ++++A R+GK LL
Sbjct: 792 ---ADKFTFNTFLDACAEAKKWNEFEYAFRKMLSNGYHFDERRHLRMVLDAYRSGKEQLL 848
Query: 569 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF-HITERQWTELFE 627
E +D L G +P E + Q + A++ I++ + +++ + W+ L
Sbjct: 849 EDIWDYLCRNGRVPPAAMIMERFCLKLRQGHTTAALSCISSFQESKIGNVSSKSWSSLLN 908
Query: 628 SNEDRISRDKLEKLLNAL 645
N D + + + +L++ L
Sbjct: 909 RNADLLEEESVAELVHKL 926
>gi|357130707|ref|XP_003566988.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Brachypodium distachyon]
Length = 976
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/583 (36%), Positives = 330/583 (56%), Gaps = 30/583 (5%)
Query: 109 KRENLRELKEMFEKDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSER 168
K EN+ +L + +D V+DD + +V P E I+ L +L+
Sbjct: 381 KGENV-QLGKFVRRDSEAVIDDRAAFKTFEVFTDVRNRPRVLQMEIEERIQKLASQLNAT 439
Query: 169 EMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR 228
++ WKF ++++ + + FT+ +L++++ LG G+W++ + V++W+ + + KSR
Sbjct: 440 DVNTPEWKFSKMIHDAQIKFTDHSILRIVQILGRYGNWKRVLQVVEWLQSRERFKSYKSR 499
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
++YT +L +LGKA +P EAL +F ML+ + YPDIAAYH +AVTLGQ GL+KEL +I+
Sbjct: 500 YIYTTVLDVLGKAKKPFEALNVFYTMLDQMSSYPDIAAYHCIAVTLGQAGLVKELFDVID 559
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR P K+ +NWDP LEPDL+VYNAVLNACV QW+G FWV +QL++ ++P+
Sbjct: 560 CMRSPPRKKFMAGPVQNWDPRLEPDLIVYNAVLNACVQQKQWEGTFWVLQQLKEKNIRPT 619
Query: 349 AATYGLAMESYRRCL----------------------LKVLVRAFWEEGKINEAVAAVRN 386
TYGL ME C KVLV A W EGKI+EAV AV++
Sbjct: 620 NTTYGLVMEVMLVCGKYNLVYEFFDRVKQKSIPGALNYKVLVNALWREGKIDEAVMAVKD 679
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
ME+RG+VG+AS+YY+LA CLC+ GR ++A+L VEKI + +KPL +T+TGLI +D G
Sbjct: 680 MEKRGIVGSASLYYDLARCLCSGGRCKEALLQVEKICKV-ANKPLVVTYTGLIQICIDSG 738
Query: 447 HIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
+++ IF M +C PN T N MLK Y + MF AK+L E G S
Sbjct: 739 SMENAKYIFNEMCSYCSPNNVTCNIMLKSYIEHGMFEDAKDLLENILNGR-IGSKLDSSQ 797
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
A + D++T+++ LEA A A +W FE ++ M +G D+ +H ++++A R GK
Sbjct: 798 TA--EADKFTFNTFLEACAEAKKWNDFEDAFRKMLSNGYHFDERRHLRMVLDAYRNGKEQ 855
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF-HITERQWTEL 625
LLE+ +D L G +P E + Q + A++ I++ + ++ W L
Sbjct: 856 LLENIWDYLCHHGRVPPVPMIMERFCLKLRQGDTTTALSCISSFQESKIRRVSSMSWFNL 915
Query: 626 FESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALC 668
N DR+ + + KL++ L N ASS T +L + + + C
Sbjct: 916 LNRNADRLKEESIAKLVHEL--NNYASSGSTCDSLYQNILSSC 956
>gi|218188830|gb|EEC71257.1| hypothetical protein OsI_03237 [Oryza sativa Indica Group]
Length = 994
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/518 (38%), Positives = 304/518 (58%), Gaps = 28/518 (5%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
I+ L RL+ ++ WKF ++++ + + F++ +L++++ LG G+W++ + V++W+
Sbjct: 444 IQKLASRLNATDVNTPEWKFSKMIHDAKIKFSDHSILRVVQILGRYGNWKRVLQVVEWLQ 503
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ + KSR++YT +L +LGKA RP EAL +F ML+ + YPD+AAYH +AVTLGQ
Sbjct: 504 SRERFKSYKSRYIYTTVLDVLGKAKRPFEALNVFYTMLDQLSSYPDMAAYHCIAVTLGQS 563
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
GL+KEL +I+RMR P K+ K +NWDP LEPDL+VYNAVLNACV QW+G FWV
Sbjct: 564 GLVKELFDVIDRMRS-PPKKFKLSPIQNWDPRLEPDLIVYNAVLNACVQQKQWEGAFWVL 622
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCL----------------------LKVLVRAFWEEG 375
+QL++ ++P+ TYGL ME C KVL+ A W EG
Sbjct: 623 QQLKEKNIRPTNTTYGLVMEVMLVCGKYNLVYEFFNKVEKTSIPGALNYKVLINALWREG 682
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
KI+EAV AV+ ME RG+VG+AS+YY+LA CLC+ GR ++A+L VEKI + +KPL +T+
Sbjct: 683 KIDEAVMAVKGMESRGIVGSASLYYDLARCLCSGGRCKEALLQVEKICKV-ANKPLVVTY 741
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
TGLI + +D G +++ IF M +C PN T N MLK Y+ + MF AK+L E
Sbjct: 742 TGLIQTCIDNGSMENAKYIFDEMCKYCSPNNVTCNIMLKSYTEHGMFEDAKDLLENILSG 801
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
S D++T++ +EA A A +W FEY ++ M SG D+ +H +
Sbjct: 802 RIRSKVESSQKAI---ADKFTFNIFMEACAEAKRWNDFEYAFRKMLSSGYHFDERRHLHM 858
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
+++A R GK LLE +D + + G +P E + Q + A++ IN +
Sbjct: 859 VLDAYRNGKEQLLEDVWDYMCQYGRVPPAPMIMERFCLKLRQGDTVAAMSCINTFQESKI 918
Query: 616 -HITERQWTELFESNEDRISRDKLEKLLNALCNCNAAS 652
+++ W L N DR+ D + KLL+ L N ++S
Sbjct: 919 RNVSSMSWFNLLNRNGDRLKEDIIIKLLHELNNLVSSS 956
>gi|222619034|gb|EEE55166.1| hypothetical protein OsJ_02981 [Oryza sativa Japonica Group]
Length = 994
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/518 (38%), Positives = 304/518 (58%), Gaps = 28/518 (5%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
I+ L RL+ ++ WKF ++++ + + F++ +L++++ LG G+W++ + V++W+
Sbjct: 444 IQKLASRLNATDVNTPEWKFSKMIHDAKIKFSDHSILRVVQILGRYGNWKRVLQVVEWLQ 503
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ + KSR++YT +L +LGKA RP EAL +F ML+ + YPD+AAYH +AVTLGQ
Sbjct: 504 SRERFKSYKSRYIYTTVLDVLGKAKRPFEALNVFYTMLDQLSSYPDMAAYHCIAVTLGQS 563
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
GL+KEL +I+RMR P K+ K +NWDP LEPDL+VYNAVLNACV QW+G FWV
Sbjct: 564 GLVKELFDVIDRMRS-PPKKFKLSPIQNWDPRLEPDLIVYNAVLNACVQQKQWEGAFWVL 622
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCL----------------------LKVLVRAFWEEG 375
+QL++ ++P+ TYGL ME C KVL+ A W EG
Sbjct: 623 QQLKEKNIRPTNTTYGLVMEVMLVCGKYNLVYEFFNKVEKTSIPGTLNYKVLINALWREG 682
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
KI+EAV AV+ ME RG+VG+AS+YY+LA CLC+ GR ++A+L VEKI + +KPL +T+
Sbjct: 683 KIDEAVMAVKGMESRGIVGSASLYYDLARCLCSGGRCKEALLQVEKICKV-ANKPLVVTY 741
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
TGLI + +D G +++ IF M +C PN T N MLK Y+ + MF AK+L E
Sbjct: 742 TGLIQTCIDNGSMENAKYIFDEMCKYCSPNNITCNIMLKSYTEHGMFEDAKDLLENILSG 801
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
S D++T++ +EA A A +W FEY ++ M SG D+ +H +
Sbjct: 802 RIRSKVESSQKAI---ADKFTFNIFMEACAEAKRWNDFEYAFRKMLSSGYHFDERRHLRM 858
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
+++A R GK LLE +D + + G +P E + Q + A++ IN +
Sbjct: 859 VLDAYRNGKEQLLEDVWDYMCQYGRVPPAPMIMERFCLKLRQGDTVAAMSCINTFQESKI 918
Query: 616 -HITERQWTELFESNEDRISRDKLEKLLNALCNCNAAS 652
+++ W L N DR+ D + KLL+ L N ++S
Sbjct: 919 RNVSSMSWFNLLNRNGDRLKEDIIIKLLHELNNLVSSS 956
>gi|242053953|ref|XP_002456122.1| hypothetical protein SORBIDRAFT_03g030920 [Sorghum bicolor]
gi|241928097|gb|EES01242.1| hypothetical protein SORBIDRAFT_03g030920 [Sorghum bicolor]
Length = 937
Score = 378 bits (970), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/521 (37%), Positives = 304/521 (58%), Gaps = 39/521 (7%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
E I+ L RL+ ++ WKF ++++ + + F++ +L++++ LG G+W+ + V++W
Sbjct: 389 ERIQKLASRLNATDVNTPEWKFSKMIHDAKIKFSDHSILRIVQMLGRYGNWKCVLQVVEW 448
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ + + KSR++YT +L +LGKA RP EAL +F M + YPD+AAYH +AVTLG
Sbjct: 449 LQSRERFKSYKSRYIYTTVLDVLGKAKRPLEALNVFYSMQNQLSSYPDMAAYHCIAVTLG 508
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
Q GL+KEL +I+ MR P K+ K +NWDP LEPDL+VYNAVLNACV QW+G FW
Sbjct: 509 QAGLVKELFDVIDCMRSPPRKKFKLSPLQNWDPRLEPDLIVYNAVLNACVQQKQWEGAFW 568
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCL----------------------LKVLVRAFWE 373
V +QL++ ++P+ +TYGL ME C KVLV A W
Sbjct: 569 VLQQLKEKNIRPTNSTYGLVMEVMLVCGKYNLVYEFFNKVEKSSIPGALNYKVLVNALWR 628
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
EGKINEAV AV++ME RG+VG+AS+YY+LA CLC+ GR ++A+L VEKI + +KPL +
Sbjct: 629 EGKINEAVMAVKDMESRGIVGSASLYYDLARCLCSGGRCKEALLQVEKICKV-ANKPLVV 687
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET- 492
T+TGLI + +D G +++ IF HM ++C PN T N MLK Y ++ M AK+L +
Sbjct: 688 TYTGLIQTCIDNGGMENAKYIFNHMCNYCSPNTVTCNIMLKSYIQHGMLEDAKDLLYDIL 747
Query: 493 -----TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
++A+SS D++T+++ LEA A A +W FEY ++ M L+G
Sbjct: 748 NCRIRSKADSSQVA---------TADKFTFNTFLEACAAAKRWNDFEYAFRQMLLNGYHF 798
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 607
D+ +H ++++A R GK LL+ + L +P E ++Q + A++ +
Sbjct: 799 DERRHLRMVLDAYRHGKDQLLDDLWHYLCHHSRVPPTPVIMERFCLKLMQGDTLAAISCV 858
Query: 608 NAMAYAPF-HITERQWTELFESNEDRISRDKLEKLLNALCN 647
++ +I+ W L N R+ + + KL + L N
Sbjct: 859 SSFKEGKICNISSTSWLNLLNRNTARLKEEHVTKLAHELNN 899
>gi|56201925|dbj|BAD73375.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|56202015|dbj|BAD73522.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 988
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/518 (38%), Positives = 300/518 (57%), Gaps = 34/518 (6%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
I+ L RL+ ++ WKF ++++ + + F++ +L++++ LG G+W++ + V++W+
Sbjct: 444 IQKLASRLNATDVNTPEWKFSKMIHDAKIKFSDHSILRVVQILGRYGNWKRVLQVVEWLQ 503
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ + KSR++YT +L +LGKA RP EAL + + YPD+AAYH +AVTLGQ
Sbjct: 504 SRERFKSYKSRYIYTTVLDVLGKAKRPFEALN------DQLSSYPDMAAYHCIAVTLGQS 557
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
GL+KEL +I+RMR P K+ K +NWDP LEPDL+VYNAVLNACV QW+G FWV
Sbjct: 558 GLVKELFDVIDRMRS-PPKKFKLSPIQNWDPRLEPDLIVYNAVLNACVQQKQWEGAFWVL 616
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCL----------------------LKVLVRAFWEEG 375
+QL++ ++P+ TYGL ME C KVL+ A W EG
Sbjct: 617 QQLKEKNIRPTNTTYGLVMEVMLVCGKYNLVYEFFNKVEKTSIPGTLNYKVLINALWREG 676
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
KI+EAV AV+ ME RG+VG+AS+YY+LA CLC+ GR ++A+L VEKI + +KPL +T+
Sbjct: 677 KIDEAVMAVKGMESRGIVGSASLYYDLARCLCSGGRCKEALLQVEKICKV-ANKPLVVTY 735
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
TGLI + +D G +++ IF M +C PN T N MLK Y+ + MF AK+L E
Sbjct: 736 TGLIQTCIDNGSMENAKYIFDEMCKYCSPNNITCNIMLKSYTEHGMFEDAKDLLENILSG 795
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
S D++T++ +EA A A +W FEY ++ M SG D+ +H +
Sbjct: 796 RIRSKVESSQKAI---ADKFTFNIFMEACAEAKRWNDFEYAFRKMLSSGYHFDERRHLRM 852
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
+++A R GK LLE +D + + G +P E + Q + A++ IN +
Sbjct: 853 VLDAYRNGKEQLLEDVWDYMCQYGRVPPAPMIMERFCLKLRQGDTVAAMSCINTFQESKI 912
Query: 616 -HITERQWTELFESNEDRISRDKLEKLLNALCNCNAAS 652
+++ W L N DR+ D + KLL+ L N ++S
Sbjct: 913 RNVSSMSWFNLLNRNGDRLKEDIIIKLLHELNNLVSSS 950
>gi|413950899|gb|AFW83548.1| hypothetical protein ZEAMMB73_840071 [Zea mays]
Length = 956
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 191/515 (37%), Positives = 300/515 (58%), Gaps = 39/515 (7%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
E I+ L RL+ ++ WKF ++++ + + F++ +L++++ LG G+W+ + V++W
Sbjct: 406 ERIQKLASRLNATDVNTPEWKFSKMIHDAKIKFSDHSILRIVQMLGRYGNWKCVLQVVEW 465
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ + + KSR++YT +L +LGKA RP EAL +F M + YPD+AAYH +AVTLG
Sbjct: 466 LQSHERFKSYKSRYIYTTVLDVLGKAKRPFEALNVFYTMQNQLSSYPDMAAYHCIAVTLG 525
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
Q GL+KEL +I+ M P K+ K +NWDP LEPDL+VYNAVLNACV QW+G FW
Sbjct: 526 QAGLIKELFDVIDCMCSPPRKKFKLSPLQNWDPRLEPDLIVYNAVLNACVQQKQWEGAFW 585
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCL----------------------LKVLVRAFWE 373
V +QL++ + P+ +TYGL ME C KVLV A W
Sbjct: 586 VLQQLKEKNICPTNSTYGLVMEVMLVCGKYNLVYEFFNKVDKSSIPGALNYKVLVNALWR 645
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
EGKI+EAV AV++ME RG+VG+AS+YY+LA CLC+ GR ++A+L VEKI + +KPL +
Sbjct: 646 EGKIDEAVMAVKDMESRGIVGSASLYYDLARCLCSGGRCKEALLQVEKICKV-ANKPLVV 704
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET- 492
T+TGLI + +D G ++D IF HM ++C PN T N M+K Y ++ M AK+L +
Sbjct: 705 TYTGLIQTCIDNGGMEDAKYIFNHMCNYCSPNSVTCNIMMKSYIKHGMLEDAKDLLHDIL 764
Query: 493 -----TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
++A+S+ D++T+++ +EA A A +W FEY ++ M L+G
Sbjct: 765 NCRIRSKADSNQVA---------TADKFTFNTFMEACAAAKRWNDFEYAFREMLLNGYHF 815
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 607
D+ +H ++++A R GK LL+ + L +P E ++Q + A++ +
Sbjct: 816 DERRHLRMVLDAFRHGKEQLLDDLWHYLCRHSRVPPSPVIMERFCLKLMQGDTLAAISCV 875
Query: 608 NAMAYAPF-HITERQWTELFESNEDRISRDKLEKL 641
++ +++ W L N DR+ + + KL
Sbjct: 876 SSFHEGKICNVSSMSWLNLLSRNADRLKEEHVTKL 910
>gi|255586263|ref|XP_002533784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526285|gb|EEF28597.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 856
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 234/687 (34%), Positives = 367/687 (53%), Gaps = 66/687 (9%)
Query: 41 QAQLSPSQQQALAEEQHF-QTLKREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASE 99
++Q + +++ A Q+F + L+R+ K SG+ + G R+ R + +
Sbjct: 187 RSQSTTGKKEEFAYGQNFPEMLRRKGKTHIGEEDGVSGNKMGG----RLVRNYVQIDKNT 242
Query: 100 SKEFAGDNLKRENLRELKEMFEKDLNWVLDDDVQLGSDYFA-----KNVEWHPEKRWRSE 154
KEF K+ +R + F L++ +DD ++ F N P+ R
Sbjct: 243 DKEFME---KKGLIRRTNQAF---LDYGHEDDSEVERAAFKSLEEYNNFTGRPQNSKREV 296
Query: 155 AEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
+ ++ L L+ ++ W F ++M + + +T+ +L++++ LG G+WR+ + V++
Sbjct: 297 EDRLQKLAKCLNGADIDMPEWMFSKMMRSARIKYTDHSVLRIIQILGKLGNWRRVLQVIE 356
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
W+ + + + R +YT L +LGKA RP EAL +F++M + + YPD+ AYH +AVTL
Sbjct: 357 WLQMRERFKSHRLRNIYTTALNVLGKAQRPVEALNVFHVMQQQMSSYPDLVAYHCIAVTL 416
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
GQ G +++L +I+ MR P K+ K WDP LEPD+VVYNAVLNACV QW+G F
Sbjct: 417 GQAGHMEQLFDVIDSMRSPPKKKFKMAAVHKWDPRLEPDIVVYNAVLNACVQRKQWEGAF 476
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRC----------------------LLKVLVRAFW 372
WV +QL++ GL+PS TYGL ME C + KVLV W
Sbjct: 477 WVLQQLKQQGLQPSTTTYGLIMEVMFACGKYNLVHEFFRKVQKSSIPNALVYKVLVNTLW 536
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
EGK +EAV AV ME+RG+VG A++YY+LA CLC+ GR Q+A+L +EKI + +KPL
Sbjct: 537 REGKTDEAVLAVEEMERRGIVGFAALYYDLARCLCSAGRCQEALLQIEKICRV-ANKPLV 595
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
+T+TGLI + +D G+I + + IF MK C PN+ T N MLK Y + +F AKELF +
Sbjct: 596 VTYTGLIQACLDSGNIHNAVYIFNQMKHFCSPNLVTFNVMLKAYFEHGLFEDAKELFHKM 655
Query: 493 TRANSSGYTFLSGD---GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
T ++ + G+ + PD YT+++ML+A + W+ FEYVY+ M G +
Sbjct: 656 TEDSNH----IRGNHDYKVRVIPDIYTFNTMLDACISEKSWDDFEYVYRRMLHHGFHFNG 711
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI-- 607
+H ++++ASRAGK LE + L A IP P E + + + + A+A I
Sbjct: 712 KRHLRMILDASRAGKVEPLEMTWKHLARADRIPPPNLIKERFRIMLEKDDCKSALACITT 771
Query: 608 NAMAYAP-FHITERQWTELFESNEDRISRDKLEK---------------LLNALCNCNAA 651
N M +P FH + W LF+ N ++I RD L + L N L +CN
Sbjct: 772 NPMGESPAFH--KVAWLNLFKENAEQIRRDTLIQLKHEVSMLVNPPDPVLQNLLASCNDF 829
Query: 652 SSEITVSNLSRALHALCRSEKERDLSS 678
+ + + S +C +E + +L S
Sbjct: 830 LNSQVIVSESSLPEIVCTAESQTNLKS 856
>gi|449435940|ref|XP_004135752.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Cucumis sativus]
Length = 902
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 194/540 (35%), Positives = 305/540 (56%), Gaps = 29/540 (5%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
E I++L RL+ ++ W F ++M + + +++ +L++++ LG G+WR+ + +++W
Sbjct: 353 ERIQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEW 412
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ + + K RF+YT L +LGKA RP EAL +F+ M E + YPD+ AYHS+AVTLG
Sbjct: 413 LQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLG 472
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
Q G ++EL +I+ MR P K+ K + WDP L+PD+V+YNAVLNACV +G FW
Sbjct: 473 QAGYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFW 532
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRC----------------------LLKVLVRAFWE 373
V ++L+K L+PS +TYGL ME C KVLV W+
Sbjct: 533 VLQELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWK 592
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
EGK +EAV A+ NME RG+VG+A++YY+ A CLC+ GR ++A++ +EKI + +KPL +
Sbjct: 593 EGKTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVA-NKPLVV 651
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
T+TGLI + +D + + IF HMK C PN+ T N +LK Y + MF +A+ELF+ +
Sbjct: 652 TYTGLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLS 711
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
+ T +S + PD Y +++ML+AS +W+ F Y Y M L G + +H
Sbjct: 712 EQRRNIST-VSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHL 770
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI-NAMAY 612
+++EA+R GK LLE + L +A P P E + + +Y +A++ I + +
Sbjct: 771 RMILEAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSG 830
Query: 613 APFHITERQWTELFESNEDRISRDKLEKLLN--ALCNCNAASSEITVSNLSRALHALCRS 670
H +E W L + E R RD + +L++ + S NL + CR+
Sbjct: 831 DAHHFSESAWLNLLK--EKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRT 888
>gi|356541058|ref|XP_003539000.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Glycine max]
Length = 893
Score = 362 bits (928), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 197/527 (37%), Positives = 300/527 (56%), Gaps = 37/527 (7%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
E I+ L + L+ ++ W F +++ + L F + + +++ LG G+WR+ + V++W
Sbjct: 343 EKIQKLANSLNGADINLPEWMFSKMIRSARLKFNDYAITRIIIILGKLGNWRRVIQVIEW 402
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ + + K R +YT L LGK+ RP EAL IF+ M + + YPD+ AYHS+AVTLG
Sbjct: 403 LQKRERFKSHKLRHIYTAALDALGKSRRPVEALNIFHAMQQQMSSYPDLVAYHSIAVTLG 462
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
Q G +KEL +I+ MR P K+ K +NWDP LEPD+VVY+AVLNACV QW+G FW
Sbjct: 463 QAGHMKELFDVIDIMRSPPKKKFKTGIFENWDPRLEPDIVVYHAVLNACVRRKQWEGAFW 522
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRC----------------------LLKVLVRAFWE 373
V +QL+K G PSA TYGL ME C +VLV W+
Sbjct: 523 VLQQLKKQGQPPSATTYGLVMEVMLSCGKYNLVHEFFRKLQKSFSPNSLTYRVLVNTLWQ 582
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
EGK +EA+ AV+ ME+RG+VG+AS+YY+LA CL GR +A+ ++KI + + KPL +
Sbjct: 583 EGKPDEAILAVQEMERRGIVGSASLYYDLARCLSAAGRSHEALKQIDKICKVAN-KPLVV 641
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
T+TGL+ +S+D G+I D IF+ MK+ C PN+ T N +LK Y + MF +AK LFE+ +
Sbjct: 642 TYTGLMQASLDAGNIQDGAYIFEKMKEICAPNLVTCNIILKAYLEHGMFQEAKVLFEQMS 701
Query: 494 ------RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
R N+ Y L + PD Y++++ML+A +W+YF++VY+ M G
Sbjct: 702 ENANRLRGNTD-YKML------VVPDTYSFNTMLDACVAEKRWDYFDHVYQRMLYHGYHF 754
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA-L 606
+ +H +++EAS+AGK LE + L + IP E + + +Y A+ +
Sbjct: 755 NPKRHLRMILEASKAGKERPLEITWKHLTDTDRIPPAPLIKERFCAKLEKDDYVAALTCI 814
Query: 607 INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASS 653
IN ++ W +LF+ N R +D + L+N N + +S
Sbjct: 815 INNPPKDLQPFSKSSWLKLFKENSQRFQKDTIVGLMNEASNIVSNNS 861
>gi|225444167|ref|XP_002268516.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like [Vitis vinifera]
Length = 846
Score = 358 bits (918), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 202/514 (39%), Positives = 295/514 (57%), Gaps = 31/514 (6%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
E I+ L L+ ++ W F ++M + + FT+ +L++++ LG G+WR+A+ VL+W
Sbjct: 281 ERIQKLAKLLNGADIDMPEWMFSKMMRSAKIRFTDHSILRVIQILGKLGNWRRALQVLEW 340
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ + + K R++YT L +LGKA RP EAL +F ML+ + YPD+ AYH +AVTLG
Sbjct: 341 LQLRERFKSHKLRYIYTAALDVLGKARRPVEALNVFYAMLQQMSSYPDLVAYHCIAVTLG 400
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
Q G +KEL +I+ MR P K+ K + WDP LEPD+VVYNAVLNACV QW+G FW
Sbjct: 401 QAGHMKELFDVIDCMRSPPRKKFKTGALEKWDPRLEPDIVVYNAVLNACVRRKQWEGAFW 460
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRC----------------------LLKVLVRAFWE 373
V +QL++ KPS TYGL ME C KVLV W
Sbjct: 461 VLQQLKQQSQKPSITTYGLVMEVMFVCGKYNLVHEFFWKVQKSSIPNALTYKVLVNTLWR 520
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
EGK +EAV AV++ME+RGVVG+A++YY+LA CLC+ GR Q+A++ +EKI + +KPL +
Sbjct: 521 EGKTDEAVLAVQDMEKRGVVGSAALYYDLARCLCSAGRCQEALMQIEKICKV-ANKPLVV 579
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
T+TGLI +D G+I + IF M + C PN+ T N MLK Y + MF +AK LF +
Sbjct: 580 TYTGLIQVCLDSGNIQNAAFIFNQMHEFCSPNLITCNVMLKAYLEHRMFEEAKGLFGKML 639
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
+ + + S + PD YT+++M++A +W EYVY+ M G + +H
Sbjct: 640 -GDGNHISSKSDYNDRVLPDIYTFNTMIDACNAEKRWHDLEYVYERMLRHGFHFNAKRHL 698
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY- 612
++++ASRAGK LLE + SL G +P PL E + + + AV+ I
Sbjct: 699 RIILDASRAGKEELLETTWKSLAGEGRVPPPL-IKERFCMKLEKGDCAAAVSSITGHHMN 757
Query: 613 ---APFHITERQWTELFESNEDRISRDKLEKLLN 643
PF ++R W LF N R + L +L++
Sbjct: 758 ELQEPF--SKRAWLNLFTENAGRFQTESLVELMH 789
>gi|297740901|emb|CBI31083.3| unnamed protein product [Vitis vinifera]
Length = 647
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 202/514 (39%), Positives = 295/514 (57%), Gaps = 31/514 (6%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
E I+ L L+ ++ W F ++M + + FT+ +L++++ LG G+WR+A+ VL+W
Sbjct: 5 ERIQKLAKLLNGADIDMPEWMFSKMMRSAKIRFTDHSILRVIQILGKLGNWRRALQVLEW 64
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ + + K R++YT L +LGKA RP EAL +F ML+ + YPD+ AYH +AVTLG
Sbjct: 65 LQLRERFKSHKLRYIYTAALDVLGKARRPVEALNVFYAMLQQMSSYPDLVAYHCIAVTLG 124
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
Q G +KEL +I+ MR P K+ K + WDP LEPD+VVYNAVLNACV QW+G FW
Sbjct: 125 QAGHMKELFDVIDCMRSPPRKKFKTGALEKWDPRLEPDIVVYNAVLNACVRRKQWEGAFW 184
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRC----------------------LLKVLVRAFWE 373
V +QL++ KPS TYGL ME C KVLV W
Sbjct: 185 VLQQLKQQSQKPSITTYGLVMEVMFVCGKYNLVHEFFWKVQKSSIPNALTYKVLVNTLWR 244
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
EGK +EAV AV++ME+RGVVG+A++YY+LA CLC+ GR Q+A++ +EKI + +KPL +
Sbjct: 245 EGKTDEAVLAVQDMEKRGVVGSAALYYDLARCLCSAGRCQEALMQIEKICKVA-NKPLVV 303
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
T+TGLI +D G+I + IF M + C PN+ T N MLK Y + MF +AK LF +
Sbjct: 304 TYTGLIQVCLDSGNIQNAAFIFNQMHEFCSPNLITCNVMLKAYLEHRMFEEAKGLFGKML 363
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
+ + + S + PD YT+++M++A +W EYVY+ M G + +H
Sbjct: 364 -GDGNHISSKSDYNDRVLPDIYTFNTMIDACNAEKRWHDLEYVYERMLRHGFHFNAKRHL 422
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY- 612
++++ASRAGK LLE + SL G +P PL E + + + AV+ I
Sbjct: 423 RIILDASRAGKEELLETTWKSLAGEGRVPPPL-IKERFCMKLEKGDCAAAVSSITGHHMN 481
Query: 613 ---APFHITERQWTELFESNEDRISRDKLEKLLN 643
PF ++R W LF N R + L +L++
Sbjct: 482 ELQEPF--SKRAWLNLFTENAGRFQTESLVELMH 513
>gi|224061585|ref|XP_002300553.1| predicted protein [Populus trichocarpa]
gi|222847811|gb|EEE85358.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 198/545 (36%), Positives = 304/545 (55%), Gaps = 61/545 (11%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
W+ E E I+ L + L+ ++ W F + M + + +T+ +L++++ LG G+WR+ +
Sbjct: 68 WKIE-EKIQKLGNWLNGADIDMPEWMFSKAMRSARVKYTDHSVLRIIQILGKLGNWRRVL 126
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
+++W+ + + + VYT L +LGKA RP EAL +F+ M ++ LYPD+ AY S+
Sbjct: 127 QIIEWLNIRERYKSHRLSHVYTTALHVLGKAKRPVEALNLFHAMQQEMCLYPDLVAYRSI 186
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
AVTLGQ G +KEL +I+ MR P K+ K+ D LEPDLVVYNAVLNACV QW
Sbjct: 187 AVTLGQAGYMKELFDVIDSMRS-PPKKFKSGAPGKRDLGLEPDLVVYNAVLNACVRRKQW 245
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRC----------------------LLKVLV 368
+G FWV +Q+++ G++PS ATYGL ME C + KVLV
Sbjct: 246 EGAFWVLQQMKEKGVQPSTATYGLVMEVMLACGKYNLVHEFFKKVQKSSIPNALVYKVLV 305
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV--------- 419
FW EGK EAV AV++ME+RG+VG+A++YY+LA CLC +GR Q+A+ +V
Sbjct: 306 NTFWREGKTEEAVLAVKDMERRGIVGSAALYYDLARCLCTSGRCQEALDLVIILCLIYYV 365
Query: 420 ---------------EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP 464
EKI + +KPL +T+TGL+ + +D G+I + + IF M++ C P
Sbjct: 366 SVVHVYLKLNLKNTIEKICKV-ANKPLVVTYTGLVQACLDSGNIQNAVYIFNQMRNFCPP 424
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTR-----ANSSGYTFLSGDGAPLKPDEYTYSS 519
N+ T N MLK Y + +F +A ELF + + S Y F + PD YT+++
Sbjct: 425 NLVTCNIMLKAYLEHGLFEEANELFNKMLDDGNHISRRSDYKF------RVIPDIYTFNT 478
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 579
ML+AS ++W+ FEYVY+ M G + +H ++++ASRAGK +LE + L +
Sbjct: 479 MLDASIAENKWDDFEYVYQKMLRHGFHFNANRHLRMVLDASRAGKGEVLEITWKHLAQED 538
Query: 580 EIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH-ITERQWTELFESNEDRISRDKL 638
IP P E + + +++ A+A I + + W LFE N R +D L
Sbjct: 539 RIPPPPLVKERFCMMLEKEDFDSALACITTNSAGESQAFCKSAWLNLFEENAQRFRKDTL 598
Query: 639 EKLLN 643
+L++
Sbjct: 599 MRLMH 603
>gi|334182963|ref|NP_001185117.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332193129|gb|AEE31250.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 978
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/475 (37%), Positives = 274/475 (57%), Gaps = 34/475 (7%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
I L L+ ++ W+F + + + + +T+ +++L+ LG G+WR+ + V++W+
Sbjct: 437 IEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQ 496
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ K R +YT L +LGK+ RP EAL +F+ ML + YPD+ AY S+AVTLGQ
Sbjct: 497 RQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQA 556
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G +KEL +I+ MR P K+ K + WDP LEPD+VVYNAVLNACV QW+G FWV
Sbjct: 557 GHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVL 616
Query: 338 KQLRKSGLKPSAATYGLAMESYRRC----------------------LLKVLVRAFWEEG 375
+QL++ G KPS TYGL ME C +VLV W+EG
Sbjct: 617 QQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEG 676
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
K +EAV V +ME RG+VG+A++YY+LA CLC+ GR + + +++KI + +KPL +T+
Sbjct: 677 KSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRV-ANKPLVVTY 735
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR- 494
TGLI + +D G+I + IF MK C PN+ T N MLK Y + +F +A+ELF++ +
Sbjct: 736 TGLIQACVDSGNIKNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSED 795
Query: 495 ----ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
NSS + + + PD YT+++ML+ A +W+ F Y Y+ M G +
Sbjct: 796 GNHIKNSSDFE------SRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGYHFNAK 849
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
+H +++EASRAGK ++E ++ + + IP E + + + ++ A++
Sbjct: 850 RHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKLEKGDHISAIS 904
>gi|297846000|ref|XP_002890881.1| EMB2279 [Arabidopsis lyrata subsp. lyrata]
gi|297336723|gb|EFH67140.1| EMB2279 [Arabidopsis lyrata subsp. lyrata]
Length = 913
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 173/480 (36%), Positives = 274/480 (57%), Gaps = 34/480 (7%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
I L L+ ++ W+F + + + + +T+ +++L+ LG G+WR+ + V++W+
Sbjct: 360 IEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQ 419
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ K R +YT L +LGK+ RP EAL +F+ ML + YPD+ AY S+AVTLGQ
Sbjct: 420 RQDRYKSNKLRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQA 479
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G +KEL +I+ MR P K+ K + WDP LEPD+VVYNAVLNACV QW+G FWV
Sbjct: 480 GHIKELFHVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVL 539
Query: 338 KQLRKSGLKPSAATYGLAMESYRRC----------------------LLKVLVRAFWEEG 375
+QL++ G KPS TYGL ME C +VLV W+EG
Sbjct: 540 QQLKQRGQKPSPVTYGLVMEVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEG 599
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR--------- 426
K +EA+ V +ME RG+VG+A++YY+LA CLC+ GR +A+ + + +++
Sbjct: 600 KSDEAIHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEALNMADLDHTIQCQLNKICRV 659
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
+KPL +T+TGLI + +D G+I + IF HMK C PN+ T N M+K Y + F +A+
Sbjct: 660 ANKPLVVTYTGLIQACLDSGNIKNAAYIFDHMKKVCSPNLVTCNIMIKAYLQGGFFEEAR 719
Query: 487 ELFEETTRANSSGYTFLSGD-GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
ELF++ + + +S D + + PD YT+++ML+ A +W+ F Y Y+ M G
Sbjct: 720 ELFQKMS--EDGNHIKISSDFESRVLPDMYTFNTMLDVCAEQKKWDDFGYAYREMLHHGY 777
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
+ +H +++EASRAGK ++E ++ + + IP E + + + ++ A++
Sbjct: 778 HFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKLEKGDHISAIS 837
>gi|15221459|ref|NP_174349.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200328|sp|Q9SA76.1|PPR64_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g30610, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2279; Flags: Precursor
gi|4587517|gb|AAD25748.1|AC007060_6 T5I8.6 [Arabidopsis thaliana]
gi|332193128|gb|AEE31249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1006
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/502 (35%), Positives = 277/502 (55%), Gaps = 60/502 (11%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
I L L+ ++ W+F + + + + +T+ +++L+ LG G+WR+ + V++W+
Sbjct: 437 IEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQ 496
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ K R +YT L +LGK+ RP EAL +F+ ML + YPD+ AY S+AVTLGQ
Sbjct: 497 RQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQA 556
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G +KEL +I+ MR P K+ K + WDP LEPD+VVYNAVLNACV QW+G FWV
Sbjct: 557 GHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVL 616
Query: 338 KQLRKSGLKPSAATYGLAMESYRRC----------------------LLKVLVRAFWEEG 375
+QL++ G KPS TYGL ME C +VLV W+EG
Sbjct: 617 QQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEG 676
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM--------LVVEKIKSLRH 427
K +EAV V +ME RG+VG+A++YY+LA CLC+ GR + + +V++ I++L +
Sbjct: 677 KSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMVNFVNPVVLKLIENLIY 736
Query: 428 -------------------SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 468
+KPL +T+TGLI + +D G+I + IF MK C PN+ T
Sbjct: 737 KADLVHTIQFQLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLVT 796
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTR-----ANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
N MLK Y + +F +A+ELF++ + NSS + + + PD YT+++ML+
Sbjct: 797 CNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFE------SRVLPDTYTFNTMLDT 850
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
A +W+ F Y Y+ M G + +H +++EASRAGK ++E ++ + + IP
Sbjct: 851 CAEQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPP 910
Query: 584 PLFFTEMLIQAIVQSNYEKAVA 605
E + + + ++ A++
Sbjct: 911 SPLIKERFFRKLEKGDHISAIS 932
>gi|296088227|emb|CBI35741.3| unnamed protein product [Vitis vinifera]
Length = 437
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 196/389 (50%), Positives = 251/389 (64%), Gaps = 31/389 (7%)
Query: 458 MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
MK HC PNIGT+NAMLKVY RNDMFSKAKELFEET R+ + T + L PD YTY
Sbjct: 1 MKYHCSPNIGTINAMLKVYGRNDMFSKAKELFEETKRSTFASNTCMDDGSISLVPDLYTY 60
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
SSMLEASA+AHQWE+FEYVYK M LSG QLDQ+KHA LL +ASRAGK HLLEHAFD++LE
Sbjct: 61 SSMLEASASAHQWEFFEYVYKEMTLSGYQLDQSKHALLLGKASRAGKWHLLEHAFDTILE 120
Query: 578 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDK 637
AGEIPHP FTEM+ QA Q NYE+AV LINAMA+APF ++E+QWT+LF + +DRISR
Sbjct: 121 AGEIPHPSIFTEMICQATAQHNYERAVTLINAMAHAPFVVSEKQWTDLFVT-DDRISRVN 179
Query: 638 LEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPLHGIHE 697
LEKLL++L NC+ A E TVSNL ++L +LC S D SS A FG +A+ +PL+G
Sbjct: 180 LEKLLDSLHNCDVA-EEATVSNLYKSLQSLCGSGTSMDQSSVA-FGDEAMIRTPLNGNSG 237
Query: 698 AFDVKETENVPSSSASMMFENADLGADPLPQKTDVAVDIDSINHS-SLSRQADADTEMFS 756
D + SA + +P + +DV DI S+N + S D D E S
Sbjct: 238 ELDDNKKVFFQKFSADARGSDLSPHENPPVKNSDVTFDIFSVNLTRSEEEDDDTDGETIS 297
Query: 757 KALSYIHSNDR-PSNLCIDMEGLADDWASSEHSDYLDKELAALYLSKQSQDNDVVDLQKS 815
+A +Y + D SN ++G +S+ ++K + L+ +++++D
Sbjct: 298 EAFNYACNGDEVASNEPNTLDG---------NSEGINK----IELNMRAKEDD------- 337
Query: 816 MNRVGGSRRSELPSASEILEAWKESREKD 844
S S LPSA+EILE WK+SRE+D
Sbjct: 338 ------SHGSNLPSANEILETWKKSRERD 360
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 20/185 (10%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P+I +++ G+ + + +L E ++ S N + L PDL Y+++L
Sbjct: 7 PNIGTINAMLKVYGRNDMFSKAKELFEETKR--STFASNTCMDDGSISLVPDLYTYSSML 64
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC----LLKVLVRAFWEEGKI 377
A +HQW+ +V+K++ SG + + + L + R LL+ E G+I
Sbjct: 65 EASASAHQWEFFEYVYKEMTLSGYQLDQSKHALLLGKASRAGKWHLLEHAFDTILEAGEI 124
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCN----------NGRWQDAMLVVEKIKSLRH 427
+ Q TA YE A L N +W D + ++I +
Sbjct: 125 PHPSIFTEMICQ----ATAQHNYERAVTLINAMAHAPFVVSEKQWTDLFVTDDRISRVNL 180
Query: 428 SKPLE 432
K L+
Sbjct: 181 EKLLD 185
>gi|449530674|ref|XP_004172319.1| PREDICTED: pentatricopeptide repeat-containing protein At1g30610,
chloroplastic-like, partial [Cucumis sativus]
Length = 477
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/467 (37%), Positives = 262/467 (56%), Gaps = 29/467 (6%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F+YT L +LGKA RP EAL +F+ M E + YPD+ AYHS+AVTLGQ G ++EL +I+
Sbjct: 1 FIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVID 60
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR P K+ K + WDP L+PD+V+YNAVLNACV +G FWV ++L+K L+PS
Sbjct: 61 SMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVLQELKKQSLQPS 120
Query: 349 AATYGLAMESYRRC----------------------LLKVLVRAFWEEGKINEAVAAVRN 386
+TYGL ME C KVLV W+EGK +EAV A+ N
Sbjct: 121 TSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIEN 180
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
ME RG+VG+A++YY+ A CLC+ GR ++A++ +EKI + +KPL +T+TGLI + +D
Sbjct: 181 MEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVA-NKPLVVTYTGLIQACLDSK 239
Query: 447 HIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
+ + IF HMK C PN+ T N +LK Y + MF +A+ELF+ + + T +S
Sbjct: 240 DLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQRRNIST-VSDY 298
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
+ PD Y +++ML+AS +W+ F Y Y M L G + +H +++EA+R GK
Sbjct: 299 RDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMILEAARGGKDE 358
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI-NAMAYAPFHITERQWTEL 625
LLE + L +A P P E + + +Y +A++ I + + H +E W L
Sbjct: 359 LLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHHFSESAWLNL 418
Query: 626 FESNEDRISRDKLEKLLN--ALCNCNAASSEITVSNLSRALHALCRS 670
+ E R RD + +L++ + S NL + CR+
Sbjct: 419 LK--EKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRT 463
>gi|168058150|ref|XP_001781073.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667470|gb|EDQ54099.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 413
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 171/412 (41%), Positives = 244/412 (59%), Gaps = 26/412 (6%)
Query: 179 RIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAIL 238
R+M+ + L +T+ ++L+L+K LG WR+AM V++WV+ + ++R V T LLA+L
Sbjct: 1 RLMHSARLKWTDSRLLELVKMLGACREWRRAMEVVNWVHHREHFAHCRNRHVMTTLLAVL 60
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR- 297
GK RP EAL +FN M E+ + YPD+AAYHS+AVTLGQ G L +L+ LIE +R+ P K+
Sbjct: 61 GKCHRPAEALDVFNAMREEHSTYPDMAAYHSIAVTLGQAGHLTQLLDLIESLREGPVKKT 120
Query: 298 IKNMHRK-NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+K R+ NW+ LEPD+VVYNAV+NACVP QW+G WVF+Q++ S +KP++ATYGLA
Sbjct: 121 VKGSPRQLNWNGRLEPDIVVYNAVINACVPHRQWEGTEWVFRQIQSSRIKPNSATYGLAT 180
Query: 357 ESYRRC-----------------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
E + K LV A G+I++A+ V +ME+RG++
Sbjct: 181 EVMVKSRQYDKVWRYYELMERGDFLPNASTFKALVEALGTAGEIDQAIEVVDDMERRGIL 240
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
A VYY LA LC GR +A++ VEK+ L K +T+TGLI + G D I
Sbjct: 241 ECAGVYYALASALCTAGRLSEALVQVEKLAKLPTKKLDVVTYTGLIHTCEKSGRWQDAIF 300
Query: 454 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
+F HM+ C PN+GT N M+ +Y R+ +F KAK +FE R F + + L P
Sbjct: 301 LFDHMEQFVCAPNLGTYNIMISLYGRHCLFEKAKNMFELVKRGAHKESKFYQANLSRLSP 360
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
E TY SML A +W+YFE V + G L+ +HAW L ++AG+
Sbjct: 361 TEQTYESMLGACVVCKEWDYFEVVLEEFHTRGFHLECRRHAWFLSPLTKAGQ 412
>gi|168011414|ref|XP_001758398.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690433|gb|EDQ76800.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 423
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/420 (39%), Positives = 234/420 (55%), Gaps = 26/420 (6%)
Query: 179 RIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAIL 238
R+M+ S + +T G +++L+K LG WR+AM V+ WV+ + +SR+VYT LLA+L
Sbjct: 1 RLMHGSRVKWTNGHLIELVKMLGVHNDWRKAMEVVHWVHCREHFGHCRSRYVYTTLLAVL 60
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP-SKR 297
GK RP EAL +FN+M ED + YPDIAAYHS+AVTLG+ G L +L+ LIE +RQ+ KR
Sbjct: 61 GKCLRPVEALNVFNVMREDHSTYPDIAAYHSIAVTLGKAGHLTQLLHLIESLRQESMKKR 120
Query: 298 IKNMHRK-NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+ + + +W LEPD+V+YNAV+NAC P +W+G W +Q++ S + P + TY LA+
Sbjct: 121 ARGIPLQLSWKGSLEPDIVIYNAVINACGPHREWEGAEWALQQIKFSRITPDSITYDLAI 180
Query: 357 ESYRRC-----------------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
E + K LV A G+++ A+ V +ME RGV
Sbjct: 181 EVMVKSGQYDKAWKYYELMEREGFLPSGKTFKALVEALGTTGEVDRAMEMVEDMESRGVS 240
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
A VYY LA LC GR +A++ V K+ + KP ITFT LI + G D I+
Sbjct: 241 ECAGVYYALASALCTAGRLSEALVQVAKLANHPSKKPDVITFTCLIQTCEKAGRWQDAIT 300
Query: 454 IFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 513
+F M+ C PN+GT N M+ +Y R MF +A+ +FE D + L P
Sbjct: 301 LFNRMQYVCSPNVGTYNTMIALYGRLRMFEEARNMFEFVKEGKGIDSRSTPAD-SRLSPT 359
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
+TY SML A A W+YFE V + SG QLD+ +H W + +AG+ L FD
Sbjct: 360 AHTYESMLGACAACEHWDYFEVVLQEYRTSGFQLDRRRHLWFMSPIVKAGQVCLPAFYFD 419
>gi|296086989|emb|CBI33251.3| unnamed protein product [Vitis vinifera]
Length = 462
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 174/433 (40%), Positives = 246/433 (56%), Gaps = 91/433 (21%)
Query: 2 EKIKQKLLKHGVFPTPKILRSIRKKEIQKHNRKQAKIQSQAQLSPSQQQALAEEQHFQTL 61
EKIK+ L++ GV+PTPKI+ ++RKKEIQK RK ++ +Q Q SP++ + + EE HF+TL
Sbjct: 15 EKIKRNLIRKGVYPTPKIIHTLRKKEIQKSIRKSKRLANQNQ-SPTEDEEVNEEAHFRTL 73
Query: 62 KREFKMFRRAVAAKSGDPLVGKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFE 121
KRE+ +A+ +VGKPWER F+++ + S E+ G+ LKRE+LREL E+ E
Sbjct: 74 KREYTKLSKAL-------MVGKPWERP---GFKEILNGSVEYGGERLKREHLRELSEILE 123
Query: 122 K--DLNWVLDDDVQL--GSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKF 177
K ++ W+LDDDV++ GS + W P +R +A+AIR LVDRL+ ++T ++WKF
Sbjct: 124 KRGEVRWLLDDDVEVEQGSSGNERR-GWSPARRRGGDADAIRFLVDRLTAADITIRDWKF 182
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDK--RDLKSRFVYTKLL 235
R+M QSGL FTE Q+L++++ LG +G W+ ++SV++W Y KDK R KS + TK+
Sbjct: 183 SRVMKQSGLQFTERQLLRIVEELGARGHWKHSLSVVEWAYTDKDKDNRRYKSS-ILTKVT 241
Query: 236 AI-----LGKAGRPHEALR----IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ + A P + + +F L C+L P+ A Y + Q G + +
Sbjct: 242 TLSHWYQVLNACVPTQQWKGVSWVFK-QLRKCSLKPNGATYGLAMEVMLQSGKYDHVHRF 300
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
E+MR +SG
Sbjct: 301 FEKMR--------------------------------------------------RSGEA 310
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P A TY KVLVRAFWEEGK+NEAV VR+ME+RGVVG ASVYYELACCL
Sbjct: 311 PKALTY------------KVLVRAFWEEGKVNEAVEVVRDMERRGVVGIASVYYELACCL 358
Query: 407 CNNGRWQDAMLVV 419
CNNGRWQDA++ V
Sbjct: 359 CNNGRWQDAIVEV 371
>gi|359497125|ref|XP_002271271.2| PREDICTED: uncharacterized protein LOC100243336 [Vitis vinifera]
Length = 609
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 159/408 (38%), Positives = 225/408 (55%), Gaps = 89/408 (21%)
Query: 26 KEIQKHNRKQAKIQSQAQLSPSQQQALAEEQHFQTLKREFKMFRRAVAAKSGDPLVGKPW 85
KEIQK RK ++ +Q Q SP++ + + EE HF+TLKRE+ +A+ +VGKPW
Sbjct: 177 KEIQKSIRKSKRLANQNQ-SPTEDEEVNEEAHFRTLKREYTKLSKAL-------MVGKPW 228
Query: 86 ERIERLKFRQLASESKEFAGDNLKRENLRELKEMFEK--DLNWVLDDDVQL--GSDYFAK 141
ER F+++ + S E+ G+ LKRE+LREL E+ EK ++ W+LDDDV++ GS +
Sbjct: 229 ERP---GFKEILNGSVEYGGERLKREHLRELSEILEKRGEVRWLLDDDVEVEQGSSGNER 285
Query: 142 NVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLG 201
W P +R +A+AIR LVDRL+ ++T ++WKF R+M QSGL FTE Q+L++++ LG
Sbjct: 286 R-GWSPARRRGGDADAIRFLVDRLTAADITIRDWKFSRVMKQSGLQFTERQLLRIVEELG 344
Query: 202 DKGSWRQAMSVLDWVYGLKDK--RDLKSRFVYTKLLAI-----LGKAGRPHEALRIFNLM 254
+G W+ ++SV++W Y KDK R KS + TK+ + + A P + + + +
Sbjct: 345 ARGHWKHSLSVVEWAYTDKDKDNRRYKSS-ILTKVTTLSHWYQVLNACVPTQQWKGVSWV 403
Query: 255 ---LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
L C+L P+ A Y + Q G + + E+MR
Sbjct: 404 FKQLRKCSLKPNGATYGLAMEVMLQSGKYDHVHRFFEKMR-------------------- 443
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
+SG P A TY KVLVRAF
Sbjct: 444 ------------------------------RSGEAPKALTY------------KVLVRAF 461
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
WEEGK+NEAV VR+ME+RGVVG ASVYYELACCLCNNGRWQDA++ V
Sbjct: 462 WEEGKVNEAVEVVRDMERRGVVGIASVYYELACCLCNNGRWQDAIVEV 509
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 29/34 (85%)
Query: 822 SRRSELPSASEILEAWKESREKDGIFFPFEHGKK 855
S S LPSA+EILE WK+SRE+DGIFFPF+ G+K
Sbjct: 576 SHGSNLPSANEILETWKKSRERDGIFFPFQLGQK 609
>gi|147821457|emb|CAN72260.1| hypothetical protein VITISV_035448 [Vitis vinifera]
Length = 1032
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 147/458 (32%), Positives = 218/458 (47%), Gaps = 93/458 (20%)
Query: 261 YPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN-------------------- 300
YPD+ AYH +AVTLGQ G +KEL +I+ MR P K+ K
Sbjct: 536 YPDLVAYHCIAVTLGQAGHMKELFDVIDCMRSPPRKKFKTGALEKWDPRLEPDIIVYNAV 595
Query: 301 ----MHRKNWDPVL-----------EPDLVVYNAVLNACV------PSHQW--------- 330
+ RK W+ +P + Y V+ W
Sbjct: 596 LNACVRRKQWEGAFWVLQQLKQQSQKPSITTYGLVMEVVTLIETDSGGKSWLTNLVGFGR 655
Query: 331 -----------KGVFWV----------FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
GV +V F +++KS + P+A TY KVLV
Sbjct: 656 EEGLEYIVEVDIGVMFVCGKYNLVHEFFWKVQKSSI-PNALTY------------KVLVN 702
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
W EGK +EAV AV++ME+RGVVG+A++YY+LA CLC GR Q+A++ +EKI + + K
Sbjct: 703 TLWREGKTDEAVLAVQDMEKRGVVGSAALYYDLARCLCXAGRCQEALMQIEKICKVAN-K 761
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
PL +T+TGLI + +D G+I + IF M + C PN+ T N MLK Y + MF +AKELF
Sbjct: 762 PLVVTYTGLIQACLDSGNIQNAAFIFNQMHEFCSPNLITCNVMLKAYLEHRMFEEAKELF 821
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
+ + + + S + PD YT+++M++A +W EYVY+ M G +
Sbjct: 822 GKML-GDGNRISSKSDYNDRVLPDIYTFNTMIDACBAEKRWHDLEYVYERMLRHGFHFNA 880
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
+H ++++ASRAGK LLE + L G +P PL E + + + AV+ I
Sbjct: 881 KRHLRIILDASRAGKEELLETTWKXLAGEGRVPPPL-IKERFCMKLEKGDCAAAVSSITG 939
Query: 610 MAYA----PFHITERQWTELFESNEDRISRDKLEKLLN 643
PF ++R W LF N R + L +L++
Sbjct: 940 HXMKELQEPF--SKRAWLNLFTENAGRFQTESLVELMH 975
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 12/100 (12%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
E I+ L L+ ++ W F ++M + + FT+ +L++++ LG G+WR+A+ VL+W
Sbjct: 281 ERIQKLAKLLNGADIDMPEWMFSKMMRSAKIRFTDHSILRVIQILGKLGNWRRALQVLEW 340
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+ L RF KL I + +L +F +M+
Sbjct: 341 L-------QLHERFKSHKLSCI-----SENGSLVVFEVMV 368
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 109/490 (22%), Positives = 209/490 (42%), Gaps = 55/490 (11%)
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTK-LLAIL 238
++ S + ++L ++KGLG +G W +A+ V +W ++ + + V +L IL
Sbjct: 36 VLTTSEPNLSSSELLSIMKGLGREGQWNKALEVFNW---MRQSVNFRPDGVTIAVMLRIL 92
Query: 239 GKAGRPHEALRIFNLMLEDCNLYP-DIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KP 294
G+ + R+F + E+ YP D+ AY S+ L + KE + E+M++ +P
Sbjct: 93 GRESQLTTVSRLFKSLREEG--YPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQP 150
Query: 295 SKRIKNM-------HRKNWDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWV 336
S N+ ++W+ +LE PD YN + AC + +
Sbjct: 151 SLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATEL 210
Query: 337 FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
F Q++ S P TY LL V +A W NEA ++ ME G +
Sbjct: 211 FTQMKSSNCTPDRVTY--------NALLDVYGKAGW----YNEAANVLKEMESAGCLPNI 258
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
Y EL G A + + + S + +P T+T L+ + G ++ + I+
Sbjct: 259 VTYNELLSAFGRAGLCNAAAEMKDSMVS-KGIEPDVFTYTSLLSAYSRAGKVEQAMEIYN 317
Query: 457 HMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
M+ +C PN T NA++ ++ +N FS+ +FE+ ++PD
Sbjct: 318 QMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDM-------------QACGVEPDIV 364
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
T++S+L A + V++GM +G + D+ L+ R G +D +
Sbjct: 365 TWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGM 424
Query: 576 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISR 635
L+AG P F +L + +E A +++ + + + + + + + +
Sbjct: 425 LQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGEL 484
Query: 636 DKLEKLLNAL 645
+KL+++++ L
Sbjct: 485 EKLKEMVDTL 494
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/471 (19%), Positives = 183/471 (38%), Gaps = 84/471 (17%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
+LL G G A + D + + D+ F YT LL+ +AG+ +A+ I+N M
Sbjct: 263 ELLSAFGRAGLCNAAAEMKDSMVSKGIEPDV---FTYTSLLSAYSRAGKVEQAMEIYNQM 319
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
N P+ ++++ G+ E++ + E M+ +EPD+
Sbjct: 320 -RTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACG---------------VEPDI 363
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V +N++L A + + V VF+ ++K+G +P AT+ + +E+Y RC
Sbjct: 364 VTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRC------------ 411
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
G ++A++ M Q G + + L L GRW+ A L+++++ + KP +I
Sbjct: 412 GSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSY-KPNDIA 470
Query: 435 FTGLIISSMDGGH-----------------------------------IDDCISIFQHMK 459
+ ++ + +GG +D+ F M+
Sbjct: 471 YASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMR 530
Query: 460 DHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
H + T NAM+ +Y + M KA + F L G L+PD TY+
Sbjct: 531 HHGYLSDTSTFNAMISMYGKKGMMDKATDTF-----------ALLRSTG--LEPDVVTYN 577
Query: 519 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 578
++ + E + +G D + ++ S+ G+ F ++
Sbjct: 578 CLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSN 637
Query: 579 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELF 626
G P + + + + +A++++ M P +T R + +
Sbjct: 638 GIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAY 688
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/413 (20%), Positives = 160/413 (38%), Gaps = 62/413 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G QAM + + ++ + F + L+ + GK E + IF M
Sbjct: 299 LLSAYSRAGKVEQAMEIYNQ---MRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDM- 354
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKNW------ 306
+ C + PDI ++S+ G+ G+ E++K+ M++ +P K N+ + +
Sbjct: 355 QACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSS 414
Query: 307 -------DPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
D +L+ PDL +N +L A +W+ + +L +S KP+ Y
Sbjct: 415 DQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASM 474
Query: 356 MESY-----------------------RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+ +Y + LLK V + + ++EA A M G
Sbjct: 475 LHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGY 534
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC- 451
+ S + + G A ++S +P +T+ L+ G C
Sbjct: 535 LSDTSTFNAMISMYGKKGMMDKATDTFALLRS-TGLEPDVVTYNCLMGMYGREGMYRKCE 593
Query: 452 ISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 511
++ + M P++ + N ++ YS++ S A +F E S+G ++
Sbjct: 594 ATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMV---SNG----------IQ 640
Query: 512 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
PD +TY++ + + V K M +GC+ D+ + L+ + GK
Sbjct: 641 PDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGK 693
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/507 (21%), Positives = 224/507 (44%), Gaps = 75/507 (14%)
Query: 145 WHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKG 204
+ PE + +EA L+ +S++E ++ + + + L+ T+ +++ +K LG +G
Sbjct: 97 YPPEGKPCDVSEAAHSLLASISKQEDSSDATELLEFI-AGELVLTDSELVYFVKALGRQG 155
Query: 205 SWRQAMSVLDWVYGLKDKRD-LKSRFVYT-KLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
W++A+ V +W+ K D K R V T +L++LG + AL +F + +D +
Sbjct: 156 KWKKALEVFEWI----RKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSL 211
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK---------------------RIKNM 301
D+ AY S+ L + E + L E M+++ + RI+++
Sbjct: 212 DVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSL 271
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
++ D + PD YN ++ AC+ + + +F++++++G P+ TY ++ Y +
Sbjct: 272 FQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGK 331
Query: 362 ---------CLLKV--------------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
L+++ L+ A+ G +EA A +++ +G+
Sbjct: 332 GGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFT 391
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
Y L R++ A+ +++ + P +T+ LI +DD + +F+ M
Sbjct: 392 YCTLISAFNRAERYEKALETFTEMRK-TNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFM 450
Query: 459 KD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA----------------NSSGYT 501
++ +C P++ T N++LK + M ++ +F E RA GY
Sbjct: 451 QEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYV 510
Query: 502 FLSGD------GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
S D L+P T+++++ + A +W+ E V + MA +G QL HA L
Sbjct: 511 DYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGL 570
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ + +G+ L D L ++ + P
Sbjct: 571 IHSYANSGQFFQLRKYIDELEKSAKQP 597
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/444 (20%), Positives = 169/444 (38%), Gaps = 88/444 (19%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L++ +A R +AL F M N P+I Y+ + G++ L +++K+ +
Sbjct: 390 FTYCTLISAFNRAERYEKALETFTEM-RKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFK 448
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M++K PDLV +N++L + V VF++++++G P
Sbjct: 449 FMQEKNCT---------------PDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPG 493
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
T+ + +E Y RC G ++ +V + + + G+ T + L L
Sbjct: 494 VDTFNILIECYGRC------------GYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAR 541
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEIT---FTGLIISSMDGG-------HIDD-------- 450
GRWQ EK+ L+++ GLI S + G +ID+
Sbjct: 542 EGRWQQC----EKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQP 597
Query: 451 ---------------C-------ISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
C +++ Q + P+I NAM+ + ++ +A +L
Sbjct: 598 LSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKL 657
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
EE +A LKPD TY+ ++ + E V M +G +
Sbjct: 658 LEEIRKAQ-------------LKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPN 704
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+ LL ++ G+ F ++ A P F ++ Y++A+++I
Sbjct: 705 LITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIE 764
Query: 609 AM---AYAPFHITERQWTELFESN 629
M P IT + + + N
Sbjct: 765 YMTEHGCQPTQITFKALLDGYNRN 788
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 14/182 (7%)
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
+D PD+ V+NA+++ C + + +++RK+ LKP TY M Y R
Sbjct: 627 YDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGR---- 682
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
EG +A + M + G Y L +GR DA V + +
Sbjct: 683 --------EGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAA 734
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
R +P TF L+ S G + +S+ ++M +H C+P T A+L Y+RN S+
Sbjct: 735 R-VRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNRNASPSR 793
Query: 485 AK 486
K
Sbjct: 794 KK 795
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 97/262 (37%), Gaps = 56/262 (21%)
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+Y L + +Y L+ +L RA + +E + M++ G G A Y + G
Sbjct: 208 SYSLDVYAYTS-LISILSRA----RRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRG 262
Query: 411 -RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 468
W + +++K L S P + T+ +I + + H + + +FQ MK+ C PN T
Sbjct: 263 DSWDRIQSLFQEMKDLEIS-PDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVT 321
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
NA+L VY + M +A EL E + A + P+ TY+ ++ A A
Sbjct: 322 YNALLDVYGKGGMHKEASELLVEM-------------EAAGISPNIVTYNELIAAYA--- 365
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
RAG C SLL G P +
Sbjct: 366 --------------------------------RAGLCDEAAALKKSLLSKGLCPDEFTYC 393
Query: 589 EMLIQAIVQSNYEKAVALINAM 610
++ YEKA+ M
Sbjct: 394 TLISAFNRAERYEKALETFTEM 415
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 34/240 (14%)
Query: 364 LKVLVRAFWEEGKINEAVAA---VRN---MEQRGVVGTASVYYELACCLCNNGRWQDAML 417
L V+A +GK +A+ +R + RGV TAS+ L N+ + A+
Sbjct: 144 LVYFVKALGRQGKWKKALEVFEWIRKHDCFKLRGV-ATASILSVLG----NHEQLPAALE 198
Query: 418 VVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKV 475
+ E +K S L++ +T LI D+ I++F+ M+ + N T N ML +
Sbjct: 199 LFESLKQ-DESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDL 257
Query: 476 YS-RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
Y R D + + + LF+E + PD+YTY++M+ A +
Sbjct: 258 YGKRGDSWDRIQSLFQEMKDLE-------------ISPDDYTYNTMITACIQNSHCQEAL 304
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE---AGEIPHPLFFTEML 591
+++ M +GC ++ + LL GK + + A + L+E AG P+ + + E++
Sbjct: 305 RLFQEMKEAGCCPNRVTYNALL---DVYGKGGMHKEASELLVEMEAAGISPNIVTYNELI 361
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 190/444 (42%), Gaps = 60/444 (13%)
Query: 193 MLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN 252
+L ++KGLG + A+S+ D++ D+ L + V +++ILGK GR A + +
Sbjct: 109 ILGIIKGLGFNNKFDLALSLFDFIRTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLLH 168
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPS----KRIKNMHRKN 305
LE D+ Y S+ ++ +K+ +M++ +P+ I N++ K
Sbjct: 169 -NLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKM 227
Query: 306 WDP--------------VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
P L PDL YN +++ C ++ +F++++ +G +P A T
Sbjct: 228 GMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVT 287
Query: 352 YGLAMESYRRC--------LLK---------------VLVRAFWEEGKINEAVAAVRNME 388
Y ++ Y + +LK LV A+ G + +A+ R M
Sbjct: 288 YNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMV 347
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
+G+ Y L N G+ + AM V E+++ + KP TF LI D G
Sbjct: 348 DKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKV-GCKPNICTFNALIKMYGDRGKF 406
Query: 449 DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
++ + +F+ +K C P+I T N +L V+ +N M S+ +FEE R+
Sbjct: 407 EEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSR----------- 455
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
P+ T+++++ A ++ YK M +G D + + +L +R G
Sbjct: 456 --FAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQ 513
Query: 568 LEHAFDSLLEAGEIPHPLFFTEML 591
E + + G P+ + ++ +L
Sbjct: 514 SEKVLAEMKDGGCKPNEVTYSSLL 537
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 157/406 (38%), Gaps = 72/406 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G + G AM V + + + K ++ + + L+ + G G+ E +++F +
Sbjct: 361 LLSGFVNAGKEELAMEVFEEMRKVGCKPNICT---FNALIKMYGDRGKFEEMVKVFK-EI 416
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM----------- 301
+ C PDI ++++ GQ G+ E+ + E M++ P + N
Sbjct: 417 KVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSF 476
Query: 302 ------HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+++ + + PDL YNAVL W+ V +++ G KP+ TY
Sbjct: 477 DQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSL 536
Query: 356 MESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+ +Y LLK LV + + E A +RG+
Sbjct: 537 LHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGI 596
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL-----IISSMDGGH 447
+ + L GR + + +I + + L ++ T + S + H
Sbjct: 597 SPDVTTSNAM---LSIYGR-KKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFH 652
Query: 448 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
+ IF+ + D EP++ + N ++ Y RNDM +AK + EE
Sbjct: 653 KSE--QIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVP----------- 699
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
AP+ PD TY++ + A A + V + M GC+ + +
Sbjct: 700 -APV-PDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTY 743
Score = 43.1 bits (100), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 21/171 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L G K +A +L+++Y L S Y L+ + + H++ +IF +L
Sbjct: 606 MLSIYGRKKMVPKANEILNFMYESGLTLSLTS---YNSLMYMYSRTENFHKSEQIFREIL 662
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D + PD+ +Y+ V + ++ E ++IE M+ P PD+V
Sbjct: 663 -DKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKV---------------PAPVPDVV 706
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
YN + A + V + + K G KP+ TY ++ Y C LK+
Sbjct: 707 TYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWY--CKLKL 755
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 169/419 (40%), Gaps = 55/419 (13%)
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL 248
T ++L LKGLG + A+ DW KD + + V ++++LGK GR A
Sbjct: 134 TSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAA 193
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP 308
+FN + ED D+ +Y S+ G +E V + ++M + K
Sbjct: 194 NMFNGLQED-GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCK------------ 240
Query: 309 VLEPDLVVYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAME---------- 357
P L+ YN +LN W + + ++++ G+ P A TY +
Sbjct: 241 ---PTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 358 -------------SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
SY + L+ + + + EA+ + M G + Y L
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 405 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCE 463
+G +AM + ++ + +KP T+T L+ G ++ +SIF+ M++ C+
Sbjct: 358 AYARDGMLDEAMELKNQMAE-KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
PNI T NA +K+Y F++ ++F+E N G L PD T++++L
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEI---NVCG----------LSPDIVTWNTLLAV 463
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
V+K M +G ++ L+ SR G + +L+AG P
Sbjct: 464 FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 153/403 (37%), Gaps = 66/403 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G G AMS+ + + K ++ + + + + G G+ E ++IF+ +
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICT---FNAFIKMYGNRGKFTEMMKIFD-EI 445
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKN------------ 300
C L PDI ++++ GQ G+ E+ + + M++ P + N
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 301 -----MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY--- 352
++R+ D + PDL YN VL A W+ V ++ KP+ TY
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 353 --------------GLAMESY------RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
LA E Y R LLK LV + + EA A +++RG
Sbjct: 566 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII---SSMDGGHID 449
+ + A V++ +K R P T+ L+ S D G +
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKE-RGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 450 DCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
+ + + + +P+I + N ++ Y RN A +F E +
Sbjct: 685 EILR--EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG------------- 729
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
+ PD TY++ + + A +E V + M GC+ +Q +
Sbjct: 730 IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTY 772
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 115/254 (45%), Gaps = 28/254 (11%)
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
++ +++ +EG+++ A +++ G Y L N+GR+++A+ V +K+
Sbjct: 175 VVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM 234
Query: 423 KSLRHSKPLEITFTGLI-ISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRND 480
+ KP IT+ ++ + G + S+ + MK D P+ T N ++ R
Sbjct: 235 EE-DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
+ +A ++FEE A G+++ D+ TY+++L+ +H+ + V M
Sbjct: 294 LHQEAAQVFEEMKAA---GFSY----------DKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQ 597
L+G + L+ +R G +L+ A + + E G P +T +L
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDG---MLDEAMELKNQMAEKGTKPDVFTYTTLL------ 391
Query: 598 SNYEKAVALINAMA 611
S +E+A + +AM+
Sbjct: 392 SGFERAGKVESAMS 405
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 33/217 (15%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+ + K EA R F+ L++ PDI +S+ G+ ++ + +++ M+++
Sbjct: 600 LVLVCSKCDLLPEAERAFS-ELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658
Query: 294 ---PSKRIKN----MHRKNWD-------------PVLEPDLVVYNAVLNACVPSHQWKGV 333
PS N MH ++ D ++PD++ YN V+ A + + +
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
+F ++R SG+ P TY + SY + EA+ VR M + G
Sbjct: 719 SRIFSEMRNSGIVPDVITYNTFIGSYA------------ADSMFEEAIGVVRYMIKHGCR 766
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ Y + C R +A L VE +++L P
Sbjct: 767 PNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 169/419 (40%), Gaps = 55/419 (13%)
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL 248
T ++L LKGLG + A+ DW KD + + V ++++LGK GR A
Sbjct: 134 TSSELLAFLKGLGFHKKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAA 193
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP 308
+FN + ED D+ +Y S+ G +E V + ++M ++ K
Sbjct: 194 NLFNGLQED-GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCK------------ 240
Query: 309 VLEPDLVVYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL--- 364
P L+ YN +LN W + + ++++ G+ P A TY + +R L
Sbjct: 241 ---PTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 365 --------------------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
L+ + + + EA+ + ME G + Y L
Sbjct: 298 AAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLIS 357
Query: 405 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCE 463
+G +AM + ++ + +KP T+T L+ G ++ ++IF+ M++ C+
Sbjct: 358 AYARDGMLDEAMELKNQMAE-KGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCK 416
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
PNI T NA +K+Y F ++F+E N G L PD T++++L
Sbjct: 417 PNICTFNAFIKMYGNRGKFVDMMKIFDEI---NVCG----------LSPDIVTWNTLLAV 463
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
V+K M +G ++ L+ SR G + +L+AG P
Sbjct: 464 FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 84/435 (19%), Positives = 165/435 (37%), Gaps = 84/435 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G G AM++ + + K ++ + + + + G G+ + ++IF+ +
Sbjct: 390 LLSGFERAGKVESAMNIFEEMRNAGCKPNICT---FNAFIKMYGNRGKFVDMMKIFD-EI 445
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKN------------ 300
C L PDI ++++ GQ G+ E+ + + M++ P + N
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 301 -----MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
++R+ D + PDL YN VL A W+ V ++ KP+ TY
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+ +Y L+ + EE + V +E R V+ V L C C+
Sbjct: 566 LHAYANGKEIGLMHSLAEE--VYSGV-----IEPRAVLLKTLV---LVCSKCD------- 608
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKV 475
L+ E ++ K E F+ P+I T+N+M+ +
Sbjct: 609 -LLPEAERAFSELK--ERGFS---------------------------PDITTLNSMVSI 638
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
Y R M KA E+ + G+T P TY+S++ + + + E
Sbjct: 639 YGRRQMVGKANEVLD---YMKERGFT----------PSMATYNSLMYMHSRSADFGKSEE 685
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
+ + + G + D + ++ R + F + ++G +P + + +
Sbjct: 686 ILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYA 745
Query: 596 VQSNYEKAVALINAM 610
S +E+A+ ++ M
Sbjct: 746 ADSMFEEAIGVVRYM 760
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 111/253 (43%), Gaps = 28/253 (11%)
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
++ +++ +EG+++ A +++ G Y L N+GR+++A+ V +K+
Sbjct: 175 VIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM 234
Query: 423 KSLRHSKPLEITFTGLI-ISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRND 480
+ KP IT+ ++ + G + S+ + MK D P+ T N ++ R
Sbjct: 235 EE-EGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGS 293
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
+ +A ++FEE A S D+ TY+++L+ +H+ + V M
Sbjct: 294 LHQEAAQVFEEMKAAGFSH-------------DKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQ 597
L+G + L+ +R G +L+ A + + E G P +T +L
Sbjct: 341 ELNGFSPSIVTYNSLISAYARDG---MLDEAMELKNQMAEKGTKPDVFTYTTLL------ 391
Query: 598 SNYEKAVALINAM 610
S +E+A + +AM
Sbjct: 392 SGFERAGKVESAM 404
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 33/217 (15%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+ + K EA R F+ L++ PDI +S+ G+ ++ + ++++ M+++
Sbjct: 600 LVLVCSKCDLLPEAERAFS-ELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKER 658
Query: 294 ---PSKRIKN----MHRKNWD-------------PVLEPDLVVYNAVLNACVPSHQWKGV 333
PS N MH ++ D ++PD++ YN V+ A + + +
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
+F ++R SG+ P TY + SY + EA+ VR M + G
Sbjct: 719 SRIFSEMRDSGIVPDVITYNTFIGSYA------------ADSMFEEAIGVVRYMIKHGCR 766
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ Y + C R +A L VE +++L P
Sbjct: 767 PNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 98/462 (21%), Positives = 185/462 (40%), Gaps = 68/462 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ LG G W A+ V+ + K +L + Y L+ LGKAG+ EALR+ M
Sbjct: 50 LINSLGRAGKWEAALEVVAEMQAKGCKPNL---WTYNTLVDCLGKAGQFDEALRLLAEM- 105
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR------------------------ 291
D PD+ Y+ + TLG+ G L E L MR
Sbjct: 106 RDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRS 165
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
QK + ++ M R PD++ Y++++ + F +F+++++ G KP + T
Sbjct: 166 QKAMELLEEMERHGC----PPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSIT 221
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
+ L+ A + G++++A+ + M++RGV Y L G
Sbjct: 222 F------------TALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGD 269
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 470
+A +++++K KP +T++ LI + +D+ + + M K+ C P+ T N
Sbjct: 270 LVEAYNLLDEMKR-NGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYN 328
Query: 471 AMLKVYSRNDMFSKAKELFE----------------------ETTRANSSGYTFLSGDGA 508
++ + + + A LF+ + R S+ F +
Sbjct: 329 TLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESV 388
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
++PD +TY S++ A Q + + ++ M G D + L R G+
Sbjct: 389 GIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEA 448
Query: 569 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
F+ + E+G +P + +L+ + A L+ +
Sbjct: 449 RKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKEL 490
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 167/417 (40%), Gaps = 48/417 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
LL L G +A + + + K D+ S Y+ L+ LG+AG+ AL + M
Sbjct: 15 LLNALAKAGQCEEAQLLFEELKAAKWTPDVVS---YSCLINSLGRAGKWEAALEVVAEMQ 71
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C P++ Y+++ LG+ G E ++L+ MR D PD+
Sbjct: 72 AKGCK--PNLWTYNTLVDCLGKAGQFDEALRLLAEMR---------------DNGCVPDV 114
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
YN +++ + + F +F ++R+ G P TY L+ +
Sbjct: 115 RTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTY------------NSLIYGLGKV 162
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
G+ +A+ + ME+ G Y L L +G A + +++K R KP IT
Sbjct: 163 GRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKR-RGRKPDSIT 221
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
FT L+ + G +DD + + MK+ +P + T NA++ + + +A L +E
Sbjct: 222 FTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMK 281
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
R KPD TYS ++ A Q + V K M GC D +
Sbjct: 282 RNGC-------------KPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYN 328
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L+ +AG + FD + G P + ++ ++ + E A L M
Sbjct: 329 TLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEM 385
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 125/286 (43%), Gaps = 43/286 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GLG G A + D +K K Y+ L+ LGKA R A +F M
Sbjct: 330 LINGLGKAGLLNDAGRLFDR---MKSKGCNPDVVTYSTLITALGKAARVESACVLFEEM- 385
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + PD+ Y S+ LG+ G + + +L MR K L PD++
Sbjct: 386 ESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKG---------------LSPDVI 430
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-----GLA--MESYRRC-LLKVL 367
YNA LN+ ++K +F+ +++SGL P ATY GL+ E C LLK L
Sbjct: 431 TYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKEL 490
Query: 368 VR---AF----WEE--------GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
+ AF ++E G ++EA ++ +G+ AS Y L L GR
Sbjct: 491 IEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRV 550
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
+A +E +K + KP ++++ LI + G ID + + M
Sbjct: 551 SEAFNTLEDLKE-QGGKPDIVSYSSLISALGQTGQIDTAFELLEEM 595
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 118/281 (41%), Gaps = 27/281 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P++V YN++LNA + Q + +F++L+ + P +Y CL+ L RA
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSY--------SCLINSLGRA- 57
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
GK A+ V M+ +G Y L CL G++ +A+ ++ +++ P
Sbjct: 58 ---GKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRD-NGCVPD 113
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
T+ LI + G + + ++F M++ C P+ T N+++ + KA EL E
Sbjct: 114 VRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLE 173
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E R G P PD TYSS++ + +++ M G + D
Sbjct: 174 EMER-----------HGCP--PDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSI 220
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
L+ +AG+ D + E G P + + ++
Sbjct: 221 TFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALI 261
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 202/462 (43%), Gaps = 72/462 (15%)
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYT-KLLAILGKAGRPHEA 247
T+ +++ +K LG +G W++A+ V +W+ + K R V T +L++LG + A
Sbjct: 1 TDSELVYFVKALGRQGKWKKALEVFEWI---RKHDCFKLRGVATASILSVLGNHEQLPAA 57
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK----------- 296
L +F + +D + D+ AY S+ L + E + L E M+++ +
Sbjct: 58 LELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLD 117
Query: 297 ----------RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
RI+++ ++ D + PD YN ++ AC+ + + +F++++++G
Sbjct: 118 LYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCC 177
Query: 347 PSAATYGLAMESYRR---------CLLKV--------------LVRAFWEEGKINEAVAA 383
P+ TY ++ Y + L+++ L+ A+ G +EA A
Sbjct: 178 PNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAAL 237
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 443
+++ +G+ Y L R++ A+ +++ + P +T+ LI
Sbjct: 238 KKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRK-TNCTPNIVTYNILIDIYG 296
Query: 444 DGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA------- 495
+DD + +F+ M++ +C P++ T N++LK + M ++ +F E RA
Sbjct: 297 RMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVD 356
Query: 496 ---------NSSGYTFLSGD------GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
GY S D L+P T+++++ + A +W+ E V + M
Sbjct: 357 TFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEM 416
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
A +G QL HA L+ + +G+ L D L ++ + P
Sbjct: 417 AEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQP 458
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/419 (19%), Positives = 161/419 (38%), Gaps = 77/419 (18%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L++ +A R +AL F M + N P+I Y+ + G++ L +++K+ +
Sbjct: 251 FTYCTLISAFNRAERYEKALETFTEMRKT-NCTPNIVTYNILIDIYGRMEKLDDMMKVFK 309
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M++K PDLV +N++L + V VF++++++G P
Sbjct: 310 FMQEKNCT---------------PDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPG 354
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
T+ + +E Y RC G ++ +V + + + G+ T + L L
Sbjct: 355 VDTFNILIECYGRC------------GYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAR 402
Query: 409 NGRWQDAMLVVEKIK------------SLRHS------------------KPLEITFTGL 438
GRWQ V +++ L HS K + +G+
Sbjct: 403 EGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGI 462
Query: 439 IISSMDGGHIDDC------ISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
+ + + C +++ Q + P+I NAM+ + ++ +A +L EE
Sbjct: 463 LCKTFVLAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEI 522
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
+A LKPD TY+ ++ + E V M +G + +
Sbjct: 523 RKAQ-------------LKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITY 569
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
LL ++ G+ F ++ A P F ++ Y++A+++I M
Sbjct: 570 NTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMT 628
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 155/370 (41%), Gaps = 56/370 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+ I G+ + + +++F M E N PD+ ++S+ + G G+L E+ +
Sbjct: 287 TYNILIDIYGRMEKLDDMMKVFKFMQEK-NCTPDLVTWNSLLKSFGNCGMLTEVSNVFRE 345
Query: 290 MRQK---PSKRIKNMHRKNWDPV-----------------LEPDLVVYNAVLNACVPSHQ 329
M++ P N+ + + L+P + + A++ + +
Sbjct: 346 MKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGR 405
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
W+ V +++ ++GL+ S A + + SY F++ K + +
Sbjct: 406 WQQCEKVSQEMAEAGLQLSDACHAGLIHSYAN------SGQFFQLRKYIDELEKSAKQPL 459
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
G++ V CC+ N +A L + ++ HS +++ F +I G I+
Sbjct: 460 SGILCKTFVLAYCKCCMDN-----EAQLALNQLYDNGHSPDIKV-FNAMISMCAKRGWIE 513
Query: 450 DCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA---------NSSG 499
+ + + + K +P+ T N ++ +Y R M+ KA+E+ E RA N+
Sbjct: 514 RAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLL 573
Query: 500 YTF-----------LSGD--GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
Y++ + GD A ++PD +T+++++ + ++ ++ V + M GCQ
Sbjct: 574 YSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQ 633
Query: 547 LDQTKHAWLL 556
Q LL
Sbjct: 634 PTQITFKALL 643
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 14/172 (8%)
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
+D PD+ V+NA+++ C + + +++RK+ LKP TY M Y R
Sbjct: 488 YDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGR---- 543
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
EG ++A + M + G Y L +GR DA V + +
Sbjct: 544 --------EGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAA 595
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 476
R +P TF L+ S G + +S+ ++M +H C+P T A+L Y
Sbjct: 596 R-VRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGY 646
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 97/262 (37%), Gaps = 56/262 (21%)
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+Y L + +Y L+ +L RA + +E + M++ G G A Y + G
Sbjct: 69 SYSLDVYAYTS-LISILSRA----RRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRG 123
Query: 411 -RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 468
W + +++K L S P + T+ +I + + H + + +FQ MK+ C PN T
Sbjct: 124 DSWDRIQSLFQEMKDLEIS-PDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVT 182
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
NA+L VY + M +A EL E + A + P+ TY+ ++ A A
Sbjct: 183 YNALLDVYGKGGMHKEASELLVEM-------------EAAGISPNIVTYNELIAAYA--- 226
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
RAG C SLL G P +
Sbjct: 227 --------------------------------RAGLCDEAAALKKSLLSKGLCPDEFTYC 254
Query: 589 EMLIQAIVQSNYEKAVALINAM 610
++ YEKA+ M
Sbjct: 255 TLISAFNRAERYEKALETFTEM 276
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 106/240 (44%), Gaps = 34/240 (14%)
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQ------RGVVGTASVYYELACCLCNNGRWQDAML 417
L V+A +GK +A+ + + RGV TAS+ L N+ + A+
Sbjct: 5 LVYFVKALGRQGKWKKALEVFEWIRKHDCFKLRGV-ATASILSVLG----NHEQLPAALE 59
Query: 418 VVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKV 475
+ E +K S L++ +T LI D+ I++F+ M+ + N T N ML +
Sbjct: 60 LFESLKQ-DESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDL 118
Query: 476 YS-RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
Y R D + + + LF+E S PD+YTY++M+ A +
Sbjct: 119 YGKRGDSWDRIQSLFQEMKDLEIS-------------PDDYTYNTMITACIQNSHCQEAL 165
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE---AGEIPHPLFFTEML 591
+++ M +GC ++ + LL GK + + A + L+E AG P+ + + E++
Sbjct: 166 RLFQEMKEAGCCPNRVTYNALL---DVYGKGGMHKEASELLVEMEAAGISPNIVTYNELI 222
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 184/443 (41%), Gaps = 61/443 (13%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
+K R M ++G M LL GL G +A +LD ++++ +F Y L
Sbjct: 216 YKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDE---MRERGLQPDKFSYDTL 272
Query: 235 LAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR-- 291
+A L K G+ AL++F + DC PD+ AY ++ L + G L E KL E+MR
Sbjct: 273 MAGLCKTGKIDMALKVFEDNSNGDCP--PDVVAYSTLIAGLCKAGRLDEACKLFEKMREN 330
Query: 292 ----------------------QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
Q+ + ++ M +N P+++ Y+++++ + Q
Sbjct: 331 SCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC----TPNVITYSSLIDGLCKTGQ 386
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+ VFK++ G++P+ TY L+ F ++ A+ + M
Sbjct: 387 VRDAQEVFKRMIVRGIEPNVVTY------------NSLIHGFCMTNGVDSALLLMEEMTA 434
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
G + Y L LC GR +A + +K+ + P IT++ LI ID
Sbjct: 435 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKA-KFCNPDVITYSCLIGGFCKLERID 493
Query: 450 DCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
++F M K P++ T + +++ Y + A+ L EE ++ S
Sbjct: 494 MARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCS---------- 543
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
PD YTY+S+++ + V K MA GCQ + + L+ RAGK +
Sbjct: 544 ---PDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVA 600
Query: 569 EHAFDSLLEAGEIPHPLFFTEML 591
+ ++ G P+ + + ++
Sbjct: 601 YRLLEEMVGNGVQPNVITYRSLI 623
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 122/314 (38%), Gaps = 57/314 (18%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR---------- 361
P+ YN ++N H+ + + K++++SGL P+ TY + + R
Sbjct: 159 PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKL 218
Query: 362 --------CL-----LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
C+ L+ G ++EA + M +RG+ Y L LC
Sbjct: 219 FRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 278
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 467
G+ A+ V E S P + ++ LI G +D+ +F+ M+++ CEP++
Sbjct: 279 TGKIDMALKVFED-NSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVV 337
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T A++ + D +A+++ E N + P+ TYSS+++
Sbjct: 338 TFTALMDGLCKGDRLQEAQQVLETMEDRNCT-------------PNVITYSSLIDGLCKT 384
Query: 528 HQWEYFEYVYKGMALSG---------------CQLDQTKHAWLLVEASRAGKC--HLLEH 570
Q + V+K M + G C + A LL+E A C ++ +
Sbjct: 385 GQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITY 444
Query: 571 --AFDSLLEAGEIP 582
D L + G P
Sbjct: 445 NTLIDGLCKTGRAP 458
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 123/310 (39%), Gaps = 35/310 (11%)
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL-------- 354
+ W P + P++ Y V+ S + +++R+SG P AA Y
Sbjct: 48 KNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKA 107
Query: 355 -----------AMESYRRCLL-KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
+ME + + +++ + ++ EA M+++G V Y L
Sbjct: 108 RNTAKALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVL 167
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDH 461
C + A L+++++K P +T++ +I +D +F+ M ++
Sbjct: 168 INGFCKVHKVHRAYLLLKEMKE-SGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENG 226
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
C PN+ T N +L RN + +A EL +E L+PD+++Y +++
Sbjct: 227 CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG-------------LQPDKFSYDTLM 273
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
+ + V++ + C D ++ L+ +AG+ F+ + E
Sbjct: 274 AGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCE 333
Query: 582 PHPLFFTEML 591
P + FT ++
Sbjct: 334 PDVVTFTALM 343
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 42/231 (18%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
L ++ L+ AG +A R+ M+ DC+ PD+ Y S+ +VG + E
Sbjct: 508 LPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCS--PDVYTYTSLVDGFCKVGRMVEA 565
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
++++RM ++ +P++V Y A+++A + + + + +++ +
Sbjct: 566 RRVLKRMAKRGC---------------QPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGN 610
Query: 344 GLKPSAATY-----GLA----MESYRRCL---------------LKVLVRAFWEEGKINE 379
G++P+ TY G +E R+ L +V++ G+++
Sbjct: 611 GVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSA 670
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
A+ + ++Q G +Y L LC AM V+E++ R S+P
Sbjct: 671 ALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRP 721
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 184/443 (41%), Gaps = 61/443 (13%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
+K R M ++G M LL GL G +A +LD ++++ +F Y L
Sbjct: 97 YKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDE---MRERGLQPDKFSYDTL 153
Query: 235 LAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR-- 291
+A L K G+ AL++F + DC PD+ AY ++ L + G L E KL E+MR
Sbjct: 154 MAGLCKTGKIDMALKVFEDNSNGDCP--PDVVAYSTLIAGLCKTGRLDEACKLFEKMREN 211
Query: 292 ----------------------QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
Q+ + ++ M +N P+++ Y+++++ + Q
Sbjct: 212 SCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC----TPNVITYSSLIDGLCKTGQ 267
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+ VFK++ G++P+ TY L+ F ++ A+ + M
Sbjct: 268 VRDAQEVFKRMIVRGIEPNVVTY------------NSLIHGFCMTNGVDSALLLMEEMTA 315
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
G + Y L LC GR +A + +K+ + P IT++ LI ID
Sbjct: 316 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKA-KFCNPDVITYSCLIGGFCKLERID 374
Query: 450 DCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
++F M K P++ T + +++ Y + A+ L EE ++ S
Sbjct: 375 MARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCS---------- 424
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
PD YTY+S+++ + V K MA GCQ + + L+ RAGK +
Sbjct: 425 ---PDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVA 481
Query: 569 EHAFDSLLEAGEIPHPLFFTEML 591
+ ++ G P+ + + ++
Sbjct: 482 YKLLEEMVGNGVQPNVITYRSLI 504
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 122/315 (38%), Gaps = 57/315 (18%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR---------- 361
P+ YN ++N H+ + + K++++SGL P+ TY + + R
Sbjct: 40 PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKL 99
Query: 362 --------CL-----LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
C+ L+ G ++EA + M +RG+ Y L LC
Sbjct: 100 FRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 159
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 467
G+ A+ V E S P + ++ LI G +D+ +F+ M+++ CEP++
Sbjct: 160 TGKIDMALKVFED-NSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVV 218
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T A++ + D +A+++ E N + P+ TYSS+++
Sbjct: 219 TFTALMDGLCKGDRLQEAQQVLETMEDRNCT-------------PNVITYSSLIDGLCKT 265
Query: 528 HQWEYFEYVYKGMALSG---------------CQLDQTKHAWLLVEASRAGKC--HLLEH 570
Q + V+K M + G C + A LL+E A C ++ +
Sbjct: 266 GQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITY 325
Query: 571 --AFDSLLEAGEIPH 583
D L + G P
Sbjct: 326 NTLIDGLCKTGRAPE 340
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 42/231 (18%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
L ++ L+ AG +A R+ M+ DC+ PD+ Y S+ +VG + E
Sbjct: 389 LPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCS--PDVYTYTSLVDGFCKVGRMVEA 446
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
++++RM ++ +P++V Y A+++A + + + + +++ +
Sbjct: 447 RRVLKRMAKRGC---------------QPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGN 491
Query: 344 GLKPSAATY-----GLA----MESYRRCL---------------LKVLVRAFWEEGKINE 379
G++P+ TY G +E R+ L +V++ G+++
Sbjct: 492 GVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSA 551
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
A+ + ++Q G +Y L LC AM V+E++ R S+P
Sbjct: 552 ALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRP 602
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 168/418 (40%), Gaps = 78/418 (18%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F YT LL+ +AG+ A+R+F M P+I ++++ G G E++K+ E
Sbjct: 210 FTYTTLLSGFVRAGKDESAMRVFAEM-RAAGCKPNICTFNALIKMHGNRGKFAEMMKVFE 268
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
++ + PD+V +N +L + V VFK+++++G P
Sbjct: 269 EIK---------------NSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 313
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY + +Y RC G ++A+ + M + G+ S Y + L
Sbjct: 314 RDTYNTLISAYSRC------------GSFDQAMDIYKRMLEAGITPDLSTYNAVLAALAR 361
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM---------- 458
G W+ + + ++K R KP E+T+ L+ + +G I +++ + +
Sbjct: 362 GGLWEQSEKIFAEMKDGR-CKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAV 420
Query: 459 --------KDHCE------------------PNIGTVNAMLKVYSRNDMFSKAKELFEET 492
C+ P++ T+NAML +Y R MF+K E+
Sbjct: 421 LLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEIL--- 477
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
N SG+T P TY+S++ + + +E E V K + G + D +
Sbjct: 478 NFMNESGFT----------PSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISY 527
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
++ R G+ F + E+G +P + + + S +E A+ ++ M
Sbjct: 528 NTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYM 585
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 178/418 (42%), Gaps = 52/418 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ LG +G A S+L+ ++ KD L + YT L+ GR EA+ +F M
Sbjct: 4 IISMLGKEGKVSVAASLLNDLH--KDGFGLDV-YAYTSLITACVSNGRYREAVMVFKKME 60
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVK-LIERMRQK---PSKRIKN----------M 301
E+ P + Y+ + G++G+ +K L E M+ P + N +
Sbjct: 61 EE-GCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSL 119
Query: 302 HR------KNWDPV-LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
H K+ + PD V YNA+L+ S + K V +++ +G PS TY
Sbjct: 120 HEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTY-- 177
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
L+ A+ +G + EA+ M + G+ Y L G+ +
Sbjct: 178 ----------NSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDES 227
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 473
AM V ++++ KP TF LI + G + + +F+ +K+ C P+I T N +L
Sbjct: 228 AMRVFAEMRA-AGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLL 286
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
V+ +N M S+ +F+E RA G+ P+ TY++++ A + ++
Sbjct: 287 AVFGQNGMDSEVSGVFKEMKRA---GFV----------PERDTYNTLISAYSRCGSFDQA 333
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+YK M +G D + + +L +R G E F + + P+ L + +L
Sbjct: 334 MDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLL 391
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 87/436 (19%), Positives = 160/436 (36%), Gaps = 71/436 (16%)
Query: 163 DRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDK 222
D L + M KN M + G+ LL G G AM V + K
Sbjct: 187 DGLLKEAMELKNQ-----MVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCK 241
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
++ + + L+ + G G+ E +++F + C + PDI ++++ GQ G+ E
Sbjct: 242 PNICT---FNALIKMHGNRGKFAEMMKVFEEIKNSCCV-PDIVTWNTLLAVFGQNGMDSE 297
Query: 283 LVKLIERMRQK---PSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLN 322
+ + + M++ P + N ++++ + + PDL YNAVL
Sbjct: 298 VSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLA 357
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR--------------------- 361
A W+ +F +++ KP+ TY + +Y
Sbjct: 358 ALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEP 417
Query: 362 --CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
LLK LV + + EA A ++++G S L L GR Q
Sbjct: 418 HAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLST---LNAMLSIYGRRQMFTKTN 474
Query: 420 EKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVY 476
E + + S P T+ L+ + + + + + +P+ + N ++ Y
Sbjct: 475 EILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAY 534
Query: 477 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
RN +A +F E + L PD TY++ + + A +E V
Sbjct: 535 CRNGRMKEASRIFSEMRESG-------------LVPDVITYNTFVASYAADSMFEDAIDV 581
Query: 537 YKGMALSGCQLDQTKH 552
+ M GC+ +Q +
Sbjct: 582 VRYMIKHGCKPNQNTY 597
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 110/240 (45%), Gaps = 23/240 (9%)
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
+ V++ +EGK++ A + + ++ + G Y L +NGR+++A++V +K++
Sbjct: 1 VAVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKME 60
Query: 424 SLRHSKPLEITFTGLI-ISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDM 481
KP IT+ ++ + G + +F+ MK+ P+ T N ++ R +
Sbjct: 61 E-EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSL 119
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
+A +F++ S G+ PD+ TY+++L+ + + + V + M
Sbjct: 120 HEEAAAVFKDM---KSMGFV----------PDKVTYNALLDVYGKSRRTKEAMEVLREME 166
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQS 598
++GC + L+ +R G LL+ A + ++E G I +F L+ V++
Sbjct: 167 VNGCSPSIVTYNSLISAYARDG---LLKEAMELKNQMVEGG-INLDVFTYTTLLSGFVRA 222
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 76/192 (39%), Gaps = 28/192 (14%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
+L+I G+ + I N M E P +A Y+S+ + R +
Sbjct: 460 MLSIYGRRQMFTKTNEILNFMNES-GFTPSLATYNSL---------------MYMHSRSE 503
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+R + + ++ ++PD + YN V+ A + + K +F ++R+SGL P TY
Sbjct: 504 NFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITY- 562
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
V ++ + +A+ VR M + G + Y + C +
Sbjct: 563 -----------NTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRD 611
Query: 414 DAMLVVEKIKSL 425
DA++ + + L
Sbjct: 612 DAIMFISSLHEL 623
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 203/474 (42%), Gaps = 57/474 (12%)
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
QAM L+++ L + +++ L+ L K G P +A+++F M E + P+I Y
Sbjct: 77 QAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENM-ESSRVKPEIVTY 135
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++V L + G L++ +L+E M +K K PD+V YN ++NA +
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRKGGKS-------------APDIVTYNTLINAFYRA 182
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ + ++++ +G+ P T +LV ++G + EA+ + M
Sbjct: 183 SRIREACAFREKMKAAGINPDVLT------------CNILVSGICKDGDVEEALEILDGM 230
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+ G V Y + LC G+ +A E +K++ S L +TF L+ G
Sbjct: 231 KLAGPVPDVITYNSIIHALCVAGKVVEA---AEILKTMSCSPDL-VTFNTLLDGFCKAGM 286
Query: 448 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
+ + + + M +++ P++ T ++ R A L EE R GY
Sbjct: 287 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVR---QGYI----- 338
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
PD Y+S+++ + + E + K M++ GC+ ++ L+ RAG H
Sbjct: 339 -----PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVH 393
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ-SNYEKAVALIN---AMAYAPFHITERQW 622
++ +P PLF +++ +++ + KAV+LI+ A Y P +T
Sbjct: 394 KAREILAEMVSINMVP-PLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTL 452
Query: 623 TE-LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 675
+ L ++N R + D +++ + C N + L + LCR + D
Sbjct: 453 IDGLCKANRVREACDLADEMASRGCFPNDVT-------LGSVVFGLCRVGRVDD 499
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 113/306 (36%), Gaps = 48/306 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G G +A+ VL+ + + L YT L+ L + G+ A + ++
Sbjct: 277 LLDGFCKAGMLPRALEVLEE---MCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIV 333
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK--------------RIKNM 301
PD+ AY S+ L + G ++E KL++ M + + R N+
Sbjct: 334 RQ-GYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNV 392
Query: 302 HRKN------WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
H+ + P L YN VL + + L G P TY
Sbjct: 393 HKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTL 452
Query: 356 MESY------------------RRCL-----LKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
++ R C L +V G++++A + V M ++
Sbjct: 453 IDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRH 512
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 452
VY L LC + R DA +V++ ++ + + + LI+S GG + + +
Sbjct: 513 APNVVVYTSLIDGLCKSDRMDDACMVLDAMRG-QGVALDDFAYRKLIVSMSHGGRVAEAM 571
Query: 453 SIFQHM 458
+++ M
Sbjct: 572 AMYDEM 577
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 120/324 (37%), Gaps = 57/324 (17%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY----------GLAMES--YR 360
D+ YN +L+ V S V+K L SG P+ T+ G AM + +
Sbjct: 26 DVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFL 85
Query: 361 RCL-----------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
R L VL+ +++G ++AV NME V Y + LC +
Sbjct: 86 RALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKS 145
Query: 410 GRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIG 467
G + A L+ E I+ S P +T+ LI + I + + + MK P++
Sbjct: 146 GNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVL 205
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T N ++ ++ +A E+ + A P+ PD TY+S++ A A
Sbjct: 206 TCNILVSGICKDGDVEEALEILDGMKLA------------GPV-PDVITYNSIIHALCVA 252
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
+ + K M+ C D LL D +AG +P L
Sbjct: 253 GKVVEAAEILKTMS---CSPDLVTFNTLL----------------DGFCKAGMLPRALEV 293
Query: 588 TEMLIQAIVQSNYEKAVALINAMA 611
E + + + + L+N +
Sbjct: 294 LEEMCRENILPDVITYTILVNGLC 317
>gi|298714808|emb|CBJ25707.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1273
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 184/429 (42%), Gaps = 55/429 (12%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
W +A +L +K + + YT+L++I G++G H+AL + L P++
Sbjct: 730 WDKAEEILSM---MKSRAIKPNEVTYTELISICGRSGDVHQALAQLERARRN-GLSPNLI 785
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y++ + G + + L+E+M+ + DP L PDLV +N+V+NAC
Sbjct: 786 NYNACVDVCAKTGEVDRALALLEQMQT------------SGDPALTPDLVTFNSVINACA 833
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR--------CLLKVL---------- 367
+ W W+F +++ +GLK ++ A+++ + LLK +
Sbjct: 834 KAGDWALTLWLFSEIKAAGLKADIQSFNAALDACTKGSNPEAALALLKRMKSQGLEPDAI 893
Query: 368 -----VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
+ A G AV +R+MEQ+G+ + Y + + G W A+ +++ +
Sbjct: 894 SYQSAILACRAGGDGASAVMLLRDMEQQGLEPRDADYNLVIETVGREGDWAGALELLKSM 953
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDM 481
K+ + T+ + + G + D ++ + MKD P N+++ V+SR
Sbjct: 954 KAEGIAAD-AYTYGAAVGACAKGRNPDLARALLEEMKDLGLTPTRFCWNSIISVHSRTGN 1012
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
+ A L +E ++ + DE T+S+M+ A W+ + + M
Sbjct: 1013 TTAAMTLMDEMKQS--------------MPCDETTFSAMMHGCAQTRDWDAAGRLLEEMN 1058
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 601
+G + + + LLV A RAG+ L E + + G P +T + ++
Sbjct: 1059 AAGLKPNDACYYTLLVAACRAGELRLAEGLIKGMRKDGAAPDLYSYTTLSAACGRFHDWR 1118
Query: 602 KAVALINAM 610
A+ LI +M
Sbjct: 1119 MALRLIESM 1127
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 122/286 (42%), Gaps = 37/286 (12%)
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
A+Y + QVG + + LI+ M + D PD+V +N + AC
Sbjct: 606 ASYSPALKSAAQVGDWRNAIALIDVMTRASVT----------DKDAGPDVVCFNYAMTAC 655
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAV 384
+ + + V +++ GL + +YG+ M++Y + WE K E +A
Sbjct: 656 AKAGECELAHRVLSRIQACGLAANLVSYGICMDAYAKA-------GLWE--KALELLAEA 706
Query: 385 RNME-QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 443
R+ +V + LA CN+ W A ++ +KS R KP E+T+T LI
Sbjct: 707 RSQGLSPNIVTFTTAVRGLA---CND--WDKAEEILSMMKS-RAIKPNEVTYTELISICG 760
Query: 444 DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
G + ++ + ++ PN+ NA + V ++ +A L E+
Sbjct: 761 RSGDVHQALAQLERARRNGLSPNLINYNACVDVCAKTGEVDRALALLEQMQT-------- 812
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
SGD A L PD T++S++ A A A W +++ + +G + D
Sbjct: 813 -SGDPA-LTPDLVTFNSVINACAKAGDWALTLWLFSEIKAAGLKAD 856
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 66/357 (18%), Positives = 140/357 (39%), Gaps = 54/357 (15%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
+R M Q GL + +++ +G +G W A+ +L +K + + Y +
Sbjct: 914 LLRDMEQQGLEPRDADYNLVIETVGREGDWAGALELLK---SMKAEGIAADAYTYGAAVG 970
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
K P A + M +D L P ++S+ + G + L++ M+Q
Sbjct: 971 ACAKGRNPDLARALLEEM-KDLGLTPTRFCWNSIISVHSRTGNTTAAMTLMDEMKQS--- 1026
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS-AATYGLA 355
+ D ++A+++ C + W + +++ +GLKP+ A Y L
Sbjct: 1027 -------------MPCDETTFSAMMHGCAQTRDWDAAGRLLEEMNAAGLKPNDACYYTLL 1073
Query: 356 MESYRRCLLKV---LVRAFWEEGKINE-------------------AVAAVRNMEQRGVV 393
+ + R L++ L++ ++G + A+ + +M+ G+
Sbjct: 1074 VAACRAGELRLAEGLIKGMRKDGAAPDLYSYTTLSAACGRFHDWRMALRLIESMKIDGIP 1133
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG---LIISSMDGGHIDD 450
T +Y A C G + A +++E ++ S+ +E+ G +++ GG D
Sbjct: 1134 ATKKIYAA-ALAACGRGEAEIAEILLEMMR----SQGVELDDVGRSHALVAFGRGGRPDK 1188
Query: 451 CISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN--SSGYTFLS 504
+ + +++ PN+ N ++ + D L E RA +G +F S
Sbjct: 1189 ALVLMDDIREKGPPPNLQCFNGAIEACALADDIDGGISLLAEMGRAGIVPNGVSFRS 1245
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 177/450 (39%), Gaps = 80/450 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G R+AM + D + K D+ F YT LL+ KAG A+RIF M
Sbjct: 364 LISAYARDGLLREAMELKDQMVEKGIKPDV---FTYTTLLSGFEKAGMDEPAMRIFGEM- 419
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
P+I ++++ G G E++K+ E + I N PD+V
Sbjct: 420 RAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIE------ICN---------CAPDIV 464
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+N +L + V VFK+++++G P T+ + +Y RC G
Sbjct: 465 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRC------------G 512
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+A+A + M + GV S Y + L G W+ + V ++K R KP E+T+
Sbjct: 513 SFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGR-CKPNELTY 571
Query: 436 TGLIISSMDGGHIDDCISI-----------------------------------FQHMKD 460
L+ + + I+ ++ F+ +K
Sbjct: 572 CSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKK 631
Query: 461 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 520
P++ T+NAM+ +Y R M +KA E+ N SG++ P TY+S+
Sbjct: 632 KGSPDLSTLNAMIAIYGRRQMVAKANEIL---NFMNESGFS----------PSLATYNSL 678
Query: 521 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 580
+ + + +E E V K + G + D + ++ R G+ F + G
Sbjct: 679 MYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGL 738
Query: 581 IPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+P + + + S +E A+ ++ M
Sbjct: 739 VPDVITYNTFVASYAADSLFEDAIGVVRYM 768
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 172/412 (41%), Gaps = 49/412 (11%)
Query: 193 MLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN 252
+L ++KGLG AMSV WV +D + + V ++ +LGK G+ A I N
Sbjct: 147 VLGIIKGLGFYKKCDMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILN 206
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPS----KRIKNMHRK- 304
+ +D D+ AY S+ G ++ V + ++M + KP+ I N++ K
Sbjct: 207 NLRKD-GFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKM 265
Query: 305 --NWDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
W + + PD YN +++ C ++ VF++++ SG P T
Sbjct: 266 GMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVT 325
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
+ ++ Y + + EA+ ++ ME G + Y L +G
Sbjct: 326 FNTLLDVYGK------------SRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGL 373
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVN 470
++AM + +++ + KP T+T L+ G + + IF M+ C+PNI T N
Sbjct: 374 LREAMELKDQMVE-KGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFN 432
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
A++K++ F++ ++FEE N + PD T++++L
Sbjct: 433 ALIKMHGNRGRFAEMMKVFEEIEICNCA-------------PDIVTWNTLLAVFGQNGMD 479
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
V+K M +G ++ L+ SR G + +LEAG P
Sbjct: 480 SEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTP 531
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 29/254 (11%)
Query: 356 MESYRRC-LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
ES C ++ V++ +EGK++ A + + N+ + G Y L +NGR++D
Sbjct: 176 FESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRD 235
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDH-CEPNIGTVNAM 472
A+LV +K++ KP IT+ ++ G IS H MK P+ T N +
Sbjct: 236 AVLVFKKMEE-EGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTL 294
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
+ R ++ +A ++FEE LSG PD+ T++++L+ + + +
Sbjct: 295 ISCCRRGSLYEEAAQVFEEMK---------LSG----FSPDKVTFNTLLDVYGKSRRPKE 341
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTE 589
V K M SG + L+ +R G LL A D ++E G P +T
Sbjct: 342 AMEVLKEMEFSGFSPSIVTYNSLISAYARDG---LLREAMELKDQMVEKGIKPDVFTYTT 398
Query: 590 MLIQAIVQSNYEKA 603
+L S +EKA
Sbjct: 399 LL------SGFEKA 406
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
+K+ + + ++ R+M AK + + MN+SG + L+ ++
Sbjct: 630 KKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFE 689
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
++ VL + K DL S Y ++ + GR +A RIF+ M + L PD+ Y
Sbjct: 690 RSEEVLKEILAKGLKPDLIS---YNTVIFAYCRNGRMKDASRIFSYM-KTYGLVPDVITY 745
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE----PDLVVYNAVLNA 323
++ + L ++ + ++ M + KR +N + D + D +++ + LN
Sbjct: 746 NTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRADAIMFVSSLNQ 805
Query: 324 CVP 326
P
Sbjct: 806 LDP 808
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 174/411 (42%), Gaps = 49/411 (11%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
+ +VR N + +F+ + ++K LG G A S+L + D+ + YT L
Sbjct: 143 FHWVRTNNSNTNLFSSSAIPVIIKILGKAGRVSSAASLLLALQNDGVHIDV---YAYTCL 199
Query: 235 LAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLL-KELVKLIERMRQ 292
+ +GR +A+ +FN M +D CN P + Y+ V G++G+ + L+E MR
Sbjct: 200 INAYSSSGRYRDAVNLFNKMQQDGCN--PTLITYNVVLNVYGKMGMPWSNVTALVEAMRS 257
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+ + PDL YN +++ C ++ +F+Q++ G P TY
Sbjct: 258 RG---------------VAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTY 302
Query: 353 GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
L+ F + + EA+ ++ ME G T+ Y L G
Sbjct: 303 ------------NALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLL 350
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 471
++A+ + ++ + KP T+T L+ G D I +F M+ C+PNI T NA
Sbjct: 351 EEALDLKTQMVH-KGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNA 409
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
++K++ F++ ++F++ N S PD T++++L
Sbjct: 410 LIKMHGNRGKFAEMMKVFDDIKLCNCS-------------PDIVTWNTLLAVFGQNGMDS 456
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
++K M +G ++ L+ SR G + S+LEAG +P
Sbjct: 457 QVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVP 507
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/488 (18%), Positives = 193/488 (39%), Gaps = 85/488 (17%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D + + K ++ M +G T L+ G +A+ + +
Sbjct: 305 LLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKG 364
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
K D+ F YT LL+ KAG+ A+++F L + P+I ++++ G G
Sbjct: 365 IKPDV---FTYTTLLSGFEKAGKDDFAIQVF-LEMRAVGCKPNICTFNALIKMHGNRGKF 420
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E++K+ + ++ + N PD+V +N +L + V +FK++
Sbjct: 421 AEMMKVFDDIK------LCN---------CSPDIVTWNTLLAVFGQNGMDSQVSGIFKEM 465
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
+++G T+ + +Y RC G ++A+A ++M + GVV S Y
Sbjct: 466 KRAGFVAERDTFNTLISAYSRC------------GSFDQAMAVYKSMLEAGVVPDLSTYN 513
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-- 458
+ L G W+ + V+ +++ R KP E++++ L+ + +G I+ + + +
Sbjct: 514 AVLAALARGGLWEQSEKVLAEMEDGR-CKPNELSYSSLLHAYANGKEIERMNAFAEEIYS 572
Query: 459 ----------------------------------KDHCEPNIGTVNAMLKVYSRNDMFSK 484
+ P+I T+NAML +Y R M +K
Sbjct: 573 GSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAK 632
Query: 485 AKEL--FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
A E+ F TR P TY+S++ + + ++ E + + +
Sbjct: 633 AHEILNFMHETR---------------FTPSLTTYNSLMYMYSRSENFQKSEEILREVLE 677
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
G + D+ + ++ R G+ F + ++ +P + + + S + +
Sbjct: 678 KGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAE 737
Query: 603 AVALINAM 610
A+ ++ M
Sbjct: 738 AIDVVRYM 745
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 105/482 (21%), Positives = 187/482 (38%), Gaps = 68/482 (14%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
+R M GL ++ G G +G W++A+SVL + K Y +
Sbjct: 237 LLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLT---EMSAKGLTPETISYNMAIR 293
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP-- 294
G++GR EA+ + M E + PD+ +Y + G G + V L++ M +
Sbjct: 294 ACGRSGRWKEAVEVLRQM-ESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVA 352
Query: 295 -------SKRIKNMHRKNWDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWV 336
S + W+ +E PD +N+ + AC S +WK +
Sbjct: 353 PNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALEL 412
Query: 337 FKQLRKSGLKPSAATYGLAMES------------YRRCLL-----------KVLVRAFWE 373
K++ LKP A +Y A+E+ RR + + +RA E
Sbjct: 413 LKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGE 472
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
G+ E + +R M +G+ Y G+W+ A+ ++ K+K L + P I
Sbjct: 473 RGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMT-PDSI 531
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T+ I + G + +++ + M P++ + A + Y +N + +A EL +
Sbjct: 532 TYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQM 591
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
L P+ TY+S+++A +WE + K + + D +
Sbjct: 592 PTKG-------------LTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSY 638
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
+ S GK E A D L E G P + +T + + +EKA+ L+N
Sbjct: 639 NLAI---SACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNL 695
Query: 610 MA 611
M
Sbjct: 696 MG 697
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 174/442 (39%), Gaps = 60/442 (13%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G WR+A+ +LD + + + YT + G+ G+ +AL + + E + P+
Sbjct: 124 GKWREALGILDEM----KEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPN 179
Query: 264 IAAYHSVAVTLGQ-------VGLLKEL---------------VKLIERMRQKPSKRIKNM 301
+ Y+S G V LL+E+ +K R Q +R+ +
Sbjct: 180 VFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQW--ERVIGL 237
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
R+ L PD + YN+V+ C QWK V ++ GL P +Y +A
Sbjct: 238 LREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMA------ 291
Query: 362 CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC-NNGRWQDAMLVVE 420
+RA G+ EAV +R ME +GV + Y+ A C G+W+ ++ +++
Sbjct: 292 ------IRACGRSGRWKEAVEVLRQMESQGVTPDV-ISYDAAIKACGGGGQWETSVDLLD 344
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRN 479
++ R P I F I++ GG + + + + + P+ + N+ + +++
Sbjct: 345 EMAG-RGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKS 403
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
+ +A EL +E LKPD +Y+S +EA QWE + +
Sbjct: 404 GRWKEALELLKEMPAKR-------------LKPDAISYNSAIEACGKGGQWEMALELRRQ 450
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
M G + + G+ + G P+ + + +
Sbjct: 451 MPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQ 510
Query: 600 YEKAVALINAM---AYAPFHIT 618
+EKA+ L+ M A P IT
Sbjct: 511 WEKALDLLAKMKELAMTPDSIT 532
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 156/384 (40%), Gaps = 52/384 (13%)
Query: 201 GDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNL 260
G G W +A+ +L V L D S + +A K+GR EAL + M L
Sbjct: 366 GKGGQWEKAVELLREVTALGLTPDATS---FNSAIAACTKSGRWKEALELLKEMPAK-RL 421
Query: 261 YPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM------HRKNWDPVLE 311
PD +Y+S G+ G + ++L +M K P+ N+ R W LE
Sbjct: 422 KPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLE 481
Query: 312 -----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
P+++ YN+ + C QW+ + ++++ + P + TY A
Sbjct: 482 LLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSA----- 536
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
+ A + G+ EAVA +R M +G+ Y NG+W+ A+ ++
Sbjct: 537 -------IAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLR 589
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRN 479
++ + + P IT+ +I + GG + + + + +K+ P++ + N + +
Sbjct: 590 QMPT-KGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKR 648
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
+ +A +L E + +G L PD +Y+S + A +WE +
Sbjct: 649 GRWEEALDLLRE-----------MPAEG--LTPDVISYTSAIRACNAEGEWEKALGLLNL 695
Query: 540 MALSGCQLDQTKHAWLLVEASRAG 563
M G T ++ L +EA G
Sbjct: 696 MGAHGVSPTATSYS-LAIEACGKG 718
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 143/361 (39%), Gaps = 48/361 (13%)
Query: 110 RENLRELKEMFEKDLNWVLDDDVQLGS--DYFAKNVEWH---------PEKRWRSEAEAI 158
+E L LKEM K L D + S + K +W P K +
Sbjct: 407 KEALELLKEMPAKRLK---PDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISS 463
Query: 159 RVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG 218
+ + ER + + +R M GL +K G G W +A LD +
Sbjct: 464 NIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKA---LDLLAK 520
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K+ Y +A K GR EA+ + M L PD+ +Y + G+ G
Sbjct: 521 MKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQ-GLTPDVISYTAAIDAYGKNG 579
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ V+L +RQ P+K L P+++ YN+V+ AC +W+ + K
Sbjct: 580 QWERAVEL---LRQMPTKG------------LTPNVITYNSVIKACGRGGEWEKALDLLK 624
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
+L+++ + P +Y LA+ + + R WE EA+ +R M G+ +
Sbjct: 625 ELKETAVAPDLMSYNLAISACGK-------RGRWE-----EALDLLREMPAEGLTPDV-I 671
Query: 399 YYELACCLCN-NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y A CN G W+ A+ ++ + P +++ I + GG ++ + + +
Sbjct: 672 SYTSAIRACNAEGEWEKALGLL-NLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVRE 730
Query: 458 M 458
M
Sbjct: 731 M 731
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 36/210 (17%)
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
+G W++A+++L + G D+ S YT + GK G+ A+ + M L P
Sbjct: 543 RGRWKEAVALLREMPGQGLTPDVIS---YTAAIDAYGKNGQWERAVELLRQMPTK-GLTP 598
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM------HRKNWDPVLE-- 311
++ Y+SV G+ G ++ + L++ +++ P N+ R W+ L+
Sbjct: 599 NVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLL 658
Query: 312 ---------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
PD++ Y + + AC +W+ + + G+ P+A +Y LA+E
Sbjct: 659 REMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIE----- 713
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
A + G+ EAV VR M QRG+
Sbjct: 714 -------ACGKGGRREEAVCLVREMAQRGL 736
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 92/250 (36%), Gaps = 17/250 (6%)
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN-NGRWQDAMLVVEKI 422
L+ +R GK EA+ + M++ GVV S Y A C G+W+ A+ ++ +I
Sbjct: 113 LQAALREAATTGKWREALGILDEMKEGGVVCAHS--YTTAITTCGRQGQWEKALELLREI 170
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM 481
P + I + G + +S+ + M D P+ + N+ +K R
Sbjct: 171 PEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQ 230
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
+ + L E L PD TY+S++ QW+ V M+
Sbjct: 231 WERVIGLLREMPSVG-------------LTPDAITYNSVITGCGKEGQWKEALSVLTEMS 277
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 601
G + + + R+G+ + G P + + + +E
Sbjct: 278 AKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWE 337
Query: 602 KAVALINAMA 611
+V L++ MA
Sbjct: 338 TSVDLLDEMA 347
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 163/400 (40%), Gaps = 77/400 (19%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
V+ + Q F G + LLK L G R+A + DW+ GL D DL
Sbjct: 142 VKAIGQGLYYFDSGALAALLKELNKSGHVRRAQELFDWLRGLDDSHDLY----------- 190
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
P + M+ C G L+ ++L+ MR S+
Sbjct: 191 ------PLCNTMTYTTMISQC----------------GTQQQLRRALELVAEMR---SRG 225
Query: 298 IK-NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
I+ N+H Y+A++N C+ ++ V++Q+ G P+ TY
Sbjct: 226 IQCNVH-------------TYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTY---- 268
Query: 357 ESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
L+ + + G EA+ + +E++G+ Y + +G+ Q+A+
Sbjct: 269 --------NTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEAL 320
Query: 417 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKV 475
+ E++ + ++P T+T LI + G +D + IFQ M + CE N+ T ++++
Sbjct: 321 RIYERMLAA-GAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISA 379
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
+ + A ELF E ++ G +P+ TY+S++ A A QWE +
Sbjct: 380 CEKAGRWELALELFREM---HTEG----------CRPNVVTYNSLIAACAQGAQWEKAQE 426
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
+++ M GC+ D L+ RAG AF+ +
Sbjct: 427 MFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQM 466
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 84/204 (41%), Gaps = 27/204 (13%)
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T++ L+ + G +D + +++ M + C PN+ T N ++ VY + + +A + +
Sbjct: 232 TYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDAL 291
Query: 493 TR----------------ANSSG--------YTFLSGDGAPLKPDEYTYSSMLEASATAH 528
R N SG Y + GA +P TY++++ A
Sbjct: 292 ERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGA--QPTATTYTALISAYGKNG 349
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
Q + +++ M GC+ + ++ L+ +AG+ L F + G P+ + +
Sbjct: 350 QLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREMHTEGCRPNVVTYN 409
Query: 589 EMLIQAIVQSNYEKAVALINAMAY 612
++ + +EKA + M +
Sbjct: 410 SLIAACAQGAQWEKAQEMFEQMQH 433
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 174/404 (43%), Gaps = 68/404 (16%)
Query: 185 GLMFTEGQ-MLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS---RFVYTKLLAILGK 240
GL + + M LLK L +G ++A+ + DW+ L+ +L S + YT +++ G
Sbjct: 229 GLYYLDSSAMAALLKELAKQGYLKRAVEIFDWLRNLEPSHELSSLCDLYTYTTMISQCGS 288
Query: 241 AGRPHEALRIFNLMLE---DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
+ AL + M DCN++ +A +V + ++ L +++ K + P+
Sbjct: 289 HQQLRRALELVAEMRSRGIDCNVH-TYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLV 347
Query: 298 IKNM------HRKNWD-----------PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
N+ R W+ ++ ++ YN V++AC S Q + V++++
Sbjct: 348 TYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKM 407
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
+G+KPSA TY L+ A+ ++G++ +A+ R+M +RG Y
Sbjct: 408 LAAGVKPSATTY------------TALISAYGKKGQVEKALEIFRDMIRRGCERNVITYS 455
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 460
L GRW+ A+ + K+ + KP +TF LI + GGH + +F+ M+
Sbjct: 456 SLISACEKAGRWEMALELFSKMHK-ENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQT 514
Query: 461 H-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
C+P+ T ++ Y R + +A + FE+ PD ++S
Sbjct: 515 QGCKPDSITYCGLITAYERGGQWRRALKAFEQMQTQGC-------------HPDAAVFNS 561
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
++E W+ SG L Q+K L A+R+G
Sbjct: 562 LMEV-----LWQ-----------SGVLLAQSKALQLWTLANRSG 589
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/276 (18%), Positives = 113/276 (40%), Gaps = 30/276 (10%)
Query: 364 LKVLVRAFWEEGKINEAVAA---VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
+ L++ ++G + AV +RN+E + + Y + G Q +E
Sbjct: 238 MAALLKELAKQGYLKRAVEIFDWLRNLEPSHELSSLCDLYTYTTMISQCGSHQQLRRALE 297
Query: 421 KIKSLRHSKPLEI---TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVY 476
+ +R S+ ++ T++ L+ + +D +++ M ++ C PN+ T N ++ VY
Sbjct: 298 LVAEMR-SRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVY 356
Query: 477 SRNDMFSKA--------KELFEETTRANSSGYTFLSGDGAP--------------LKPDE 514
+ + +A K+ + R ++ + + G P +KP
Sbjct: 357 VKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSA 416
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 574
TY++++ A Q E +++ M GC+ + ++ L+ +AG+ + F
Sbjct: 417 TTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSK 476
Query: 575 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ + P+ + F ++ ++EKA L M
Sbjct: 477 MHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQM 512
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 173/412 (41%), Gaps = 49/412 (11%)
Query: 193 MLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN 252
+L ++KGLG A+ V +WV K+ L + + +++ILGK GR A + +
Sbjct: 130 VLGIVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLH 189
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPS----KRIKNMHRK- 304
+ +D D+ AY S+ G +E V + ++M + KP+ I N++ K
Sbjct: 190 NLCKD-GFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKM 248
Query: 305 --NWDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
W+ + + PD YN +++ C + ++ V K+++ +G P T
Sbjct: 249 GMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVT 308
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y L+ + + + EA+ ++ ME G + Y L +G
Sbjct: 309 Y------------NALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGL 356
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
+DA+ + ++ + KP T+T L+ G + IF+ M++ C+PNI T N
Sbjct: 357 LEDALELKNQMVE-KGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFN 415
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
A++K++ F++ ++FE+ S PD T++++L
Sbjct: 416 ALIKMHGNRGKFTEMMKVFEDIKTFQCS-------------PDIVTWNTLLSVFGQNGMD 462
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
V+K M +G ++ L+ SR G + +LEAG P
Sbjct: 463 SEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNP 514
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 170/419 (40%), Gaps = 80/419 (19%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F YT LL+ KAG+ A++IF M E C P+I ++++ G G E++K+
Sbjct: 377 FTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCK--PNICTFNALIKMHGNRGKFTEMMKVF 434
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E IK PD+V +N +L+ + V VFK+++++G P
Sbjct: 435 ED--------IKTFQ-------CSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVP 479
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
T+ + SY RC G ++A+A + M + GV S Y + L
Sbjct: 480 ERDTFNTLISSYSRC------------GSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALA 527
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--------- 458
G W+ + V+ ++K R KP E+T+ L+ + +G I+ ++ + +
Sbjct: 528 RGGLWKQSEKVLAEMKDGR-CKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRA 586
Query: 459 ---------KDHCE------------------PNIGTVNAMLKVYSRNDMFSKAKELFEE 491
C+ P+I T+NAM+ +Y R M +KA E+ +
Sbjct: 587 VLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDC 646
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
R G+T P TY+S++ + + +E E + + + G + D
Sbjct: 647 MKRG---GFT----------PSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIIS 693
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ ++ R G+ + E+G P + + + S + +A+ ++ M
Sbjct: 694 YNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYM 752
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 110/246 (44%), Gaps = 28/246 (11%)
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
++ V++ + G+++ A + + N+ + G Y + +NGR+++A++V +K+
Sbjct: 167 IIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKM 226
Query: 423 KSLRHSKPLEITFTGLI-ISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRND 480
+ + KP IT+ ++ + G + + + MK P+ T N ++ R +
Sbjct: 227 EEV-GCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGN 285
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
++ +A + +E A S PD+ TY+++L+ + + + V + M
Sbjct: 286 LYEEAAGVLKEMKLAGFS-------------PDKVTYNALLDVYGKSRRSKEAMEVLQEM 332
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQ 597
+GC + L+ +R G LLE A + ++E G P +T +L
Sbjct: 333 EGNGCPPSIVTYNSLISAYARDG---LLEDALELKNQMVEKGIKPDVFTYTTLL------ 383
Query: 598 SNYEKA 603
S +EKA
Sbjct: 384 SGFEKA 389
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 177/431 (41%), Gaps = 46/431 (10%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
MN+ GL G +L+GL D G A+ + K Y ++ L K
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAV----LHFREMSKTCPPDSVTYNTMINGLSK 56
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
+ R +A+R+ M+++ P++ +Y++V + ++ + L+E+M +
Sbjct: 57 SDRLDDAIRLLEEMVDN-GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCP---- 111
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
PD+V Y V+N Q V ++ + G +P+ TYG
Sbjct: 112 -----------PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYG------- 153
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
LV F G ++ AV VR M +RG A Y + LC+ + A+ + +
Sbjct: 154 -----TLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFK 208
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 479
+++ P T++ ++ S + G +DD + + M C PN+ T +++L +
Sbjct: 209 EMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKA 268
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
+A L + TR+ S P+ TY+++++ + + ++ +
Sbjct: 269 GKLDEATALLQRMTRSGCS-------------PNIVTYNTIIDGHCKLGRIDEAYHLLEE 315
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
M GCQ + + LL + GK + ++E G +P+ + +L +
Sbjct: 316 MVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDE 375
Query: 600 YEKAVALINAM 610
E+A L+++M
Sbjct: 376 VERACQLLSSM 386
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 86/496 (17%), Positives = 204/496 (41%), Gaps = 71/496 (14%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
EA RV+ D++ +R + +++ + ++L++ + ++G A++ +
Sbjct: 132 EACRVM-DKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 190
Query: 216 VYGLKDKRDLKSR-----------------FVYTKLLAILGKAGRPHEALRIFNLMLEDC 258
++GL R L S F Y+ ++ L K+G+ +A R+ M+
Sbjct: 191 MHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSK- 249
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
P++ Y S+ L + G L E L++RM + P++V YN
Sbjct: 250 GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC---------------SPNIVTYN 294
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC--------LLKVLVR- 369
+++ + + + +++ G +P+ TY + ++++ +C L++V+V
Sbjct: 295 TIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK 354
Query: 370 --------------AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
F ++ ++ A + +M Q+G V Y + LC + +
Sbjct: 355 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEG 414
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 474
+L++E++ S + P +TF +I + +D +F +++ C PN+ T N+++
Sbjct: 415 VLLLEQMLS-NNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVH 473
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
++ F +A+ L E TR PD TY+++++ + + +
Sbjct: 474 GLCKSRRFDQAEYLLREMTRKQGC------------SPDIITYNTVIDGLCKSKRVDRAY 521
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 594
++ M G D ++ ++ + + + +L+ G P + + ++
Sbjct: 522 KLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGF 581
Query: 595 IVQSNYEKAVALINAM 610
N +KA+ ++ +
Sbjct: 582 CKTGNLDKALEILQLL 597
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 130/331 (39%), Gaps = 50/331 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ---VGLLKELVKLI 287
Y ++A L KA + HE + + ML + N PDI ++++ + + V + EL LI
Sbjct: 398 YNTVIAGLCKATKVHEGVLLLEQMLSN-NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLI 456
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL-RKSGLK 346
+ + P+LV YN++++ S ++ ++ +++ RK G
Sbjct: 457 Q------------------ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCS 498
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P TY ++ + +++ A M G+ Y + L
Sbjct: 499 PDIITY------------NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSL 546
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 465
C R+ D V ++ P IT+ LI G++D + I Q + P+
Sbjct: 547 CK-WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPD 605
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T + + S+ +A EL E RA L PD TY+++L+
Sbjct: 606 VVTFSIFIDWLSKRGRLRQAGELLETMLRAG-------------LVPDTVTYNTLLKGFC 652
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
A + E +++ M GC+ D + L+
Sbjct: 653 DASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 162/399 (40%), Gaps = 44/399 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLIER 289
YT +L L +AGR AL++F L + P I Y+ V G++G +V L+E
Sbjct: 183 YTTVLHALSRAGRYERALQLFA-ELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEE 241
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
MR +EPD + V+ AC F+ L+ G P
Sbjct: 242 MRAAG---------------VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCV 286
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L++ F + G EA+ ++ ME G A Y ELA
Sbjct: 287 VTY------------NALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARA 334
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGT 468
G +++A ++ + S + P T+ ++ + + G +D+ +++F MK + PN+ T
Sbjct: 335 GFFEEAAKCLDTMTS-KGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNT 393
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
N + + + F+ E+ EE +R+ + P+ T+++ML
Sbjct: 394 YNLIFGMLGKKSRFTAMLEMLEEMSRSGCT-------------PNRVTWNTMLAVCGKRG 440
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+Y V GM G +L + + L+ R G +D ++ +G P +
Sbjct: 441 MEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYN 500
Query: 589 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 627
+L Q ++ A ++++ M F ++ ++ L +
Sbjct: 501 ALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQ 539
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 157/417 (37%), Gaps = 100/417 (23%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G QA++ + LK + + Y LL + GKAG EALR+ M
Sbjct: 257 VIAACGRDGLLDQAVAFFE---DLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEM- 312
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNWDPV--- 309
ED PD Y+ +A T + G +E K ++ M K P+ N + V
Sbjct: 313 EDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRV 372
Query: 310 --------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL- 354
P++ YN + ++ + + +++ +SG P+ T+
Sbjct: 373 DEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTM 432
Query: 355 -------AMESY--------RRCLLKV-------LVRAFWEEGKINEAVAAVRNMEQRGV 392
ME Y + C +++ L+ A+ G A M G
Sbjct: 433 LAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 492
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDC 451
+ Y L L G W A +V K+ L++ KP + +++ L+ GG+
Sbjct: 493 TPCLTTYNALLNVLSRQGDWSTAQSIVSKM--LKNGFKPNDQSYSLLLQCYAKGGNAAGI 550
Query: 452 ISI-----------------------------------FQHMKDHC-EPNIGTVNAMLKV 475
SI FQ +K +P++ N+ML +
Sbjct: 551 ESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAM 610
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ-WE 531
Y++N ++SKA E+F+ ++ L PD TY+S+++ A +++ WE
Sbjct: 611 YAKNGLYSKATEMFDSIKQSG-------------LSPDLITYNSLMDMYAKSNESWE 654
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 162/399 (40%), Gaps = 44/399 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLIER 289
YT +L L +AGR AL++F L + P I Y+ V G++G +V L+E
Sbjct: 183 YTTVLHALSRAGRYERALQLFA-ELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEE 241
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
MR +EPD + V+ AC F+ L+ G P
Sbjct: 242 MRAAG---------------VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCV 286
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L++ F + G EA+ ++ ME G A Y ELA
Sbjct: 287 VTY------------NALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARA 334
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGT 468
G +++A ++ + S + P T+ ++ + + G +D+ +++F MK + PN+ T
Sbjct: 335 GFFEEAAKCLDTMTS-KGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNT 393
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
N + + + F+ E+ EE +R+ + P+ T+++ML
Sbjct: 394 YNLIFGMLGKKSRFTAMLEMLEEMSRSGCT-------------PNRVTWNTMLAVCGKRG 440
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+Y V GM G +L + + L+ R G +D ++ +G P +
Sbjct: 441 MEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYN 500
Query: 589 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 627
+L Q ++ A ++++ M F ++ ++ L +
Sbjct: 501 ALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQ 539
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 157/417 (37%), Gaps = 100/417 (23%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G QA++ + LK + + Y LL + GKAG EALR+ M
Sbjct: 257 VIAACGRDGLLDQAVAFFE---DLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEM- 312
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNWDPV--- 309
ED PD Y+ +A T + G +E K ++ M K P+ N + V
Sbjct: 313 EDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRV 372
Query: 310 --------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL- 354
P++ YN + ++ + + +++ +SG P+ T+
Sbjct: 373 DEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTM 432
Query: 355 -------AMESY--------RRCLLKV-------LVRAFWEEGKINEAVAAVRNMEQRGV 392
ME Y + C +++ L+ A+ G A M G
Sbjct: 433 LAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 492
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDC 451
+ Y L L G W A +V K+ L++ KP + +++ L+ GG+
Sbjct: 493 TPCLTTYNALLNVLSRQGDWSTAQSIVSKM--LKNGFKPNDQSYSLLLQCYAKGGNAAGI 550
Query: 452 ISI-----------------------------------FQHMKDHC-EPNIGTVNAMLKV 475
SI FQ +K +P++ N+ML +
Sbjct: 551 ESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAM 610
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ-WE 531
Y++N ++SKA E+F+ ++ L PD TY+S+++ A +++ WE
Sbjct: 611 YAKNGLYSKATEMFDSIKQSG-------------LSPDLITYNSLMDMYAKSNESWE 654
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 162/399 (40%), Gaps = 44/399 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLIER 289
YT +L L +AGR AL++F L + P I Y+ V G++G +V L+E
Sbjct: 92 YTTVLHALSRAGRYERALQLFA-ELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEE 150
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
MR +EPD + V+ AC F+ L+ G P
Sbjct: 151 MRAAG---------------VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCV 195
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L++ F + G EA+ ++ ME G A Y ELA
Sbjct: 196 VTY------------NALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARA 243
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGT 468
G +++A ++ + S + P T+ ++ + + G +D+ +++F MK + PN+ T
Sbjct: 244 GFFEEAAKCLDTMTS-KGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNT 302
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
N + + + F+ E+ EE +R+ + P+ T+++ML
Sbjct: 303 YNLIFGMLGKKSRFTAMLEMLEEMSRSGCT-------------PNRVTWNTMLAVCGKRG 349
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+Y V GM G +L + + L+ R G +D ++ +G P +
Sbjct: 350 MEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYN 409
Query: 589 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 627
+L Q ++ A ++++ M F ++ ++ L +
Sbjct: 410 ALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQ 448
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 157/417 (37%), Gaps = 100/417 (23%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G QA++ + LK + + Y LL + GKAG EALR+ M
Sbjct: 166 VIAACGRDGLLDQAVAFFE---DLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEM- 221
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNWDPV--- 309
ED PD Y+ +A T + G +E K ++ M K P+ N + V
Sbjct: 222 EDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRV 281
Query: 310 --------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL- 354
P++ YN + ++ + + +++ +SG P+ T+
Sbjct: 282 DEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTM 341
Query: 355 -------AMESY--------RRCLLKV-------LVRAFWEEGKINEAVAAVRNMEQRGV 392
ME Y + C +++ L+ A+ G A M G
Sbjct: 342 LAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 401
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDC 451
+ Y L L G W A +V K+ L++ KP + +++ L+ GG+
Sbjct: 402 TPCLTTYNALLNVLSRQGDWSTAQSIVSKM--LKNGFKPNDQSYSLLLQCYAKGGNAAGI 459
Query: 452 ISI-----------------------------------FQHMKDHC-EPNIGTVNAMLKV 475
SI FQ +K +P++ N+ML +
Sbjct: 460 ESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAM 519
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ-WE 531
Y++N ++SKA E+F+ ++ L PD TY+S+++ A +++ WE
Sbjct: 520 YAKNGLYSKATEMFDSIKQSG-------------LSPDLITYNSLMDMYAKSNESWE 563
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 170/419 (40%), Gaps = 80/419 (19%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F YT LL+ KAG+ A++IF M E C P+I ++++ G G E++K+
Sbjct: 105 FTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCK--PNICTFNALIKMHGNRGKFTEMMKVF 162
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E IK PD+V +N +L+ + V VFK+++++G P
Sbjct: 163 ED--------IKTFQ-------CSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVP 207
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
T+ + SY RC G ++A+A + M + GV S Y + L
Sbjct: 208 ERDTFNTLISSYSRC------------GSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALA 255
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--------- 458
G W+ + V+ ++K R KP E+T+ L+ + +G I+ ++ + +
Sbjct: 256 RGGLWKQSEKVLAEMKDGR-CKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRA 314
Query: 459 ---------KDHCE------------------PNIGTVNAMLKVYSRNDMFSKAKELFEE 491
C+ P+I T+NAM+ +Y R M +KA E+ +
Sbjct: 315 VLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDC 374
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
R G+T P TY+S++ + + +E E + + + G + D
Sbjct: 375 MKRG---GFT----------PSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIIS 421
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ ++ R G+ + E+G P + + + S + +A+ ++ M
Sbjct: 422 YNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYM 480
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 149/376 (39%), Gaps = 44/376 (11%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++PD+ Y +L+ + + K +F+++R G KP+ C L++
Sbjct: 100 IKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNI------------CTFNALIK 147
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
GK E + +++ + L NG + V +++K
Sbjct: 148 MHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFV- 206
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P TF LI S G D +++++ M + P++ + NA+L +R ++ +++++
Sbjct: 207 PERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKV 266
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF----EYVYKGMALSG 544
E DG KP+E TY S+L A A + E E +Y G+
Sbjct: 267 LAEMK------------DGR-CKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPR 313
Query: 545 CQLDQTKHAWLLVEASRAGKCHLL---EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 601
L +T +LV + KC LL E AF L + G P M+ +
Sbjct: 314 AVLLKT---LVLVNS----KCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVA 366
Query: 602 KAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLS 661
KA +++ M F + + L + ++ E++L + A + + +
Sbjct: 367 KANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREIL---AKGIRPDIISYN 423
Query: 662 RALHALCRSEKERDLS 677
++A CR+ + RD S
Sbjct: 424 TVIYAYCRNGRMRDAS 439
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 90/195 (46%), Gaps = 17/195 (8%)
Query: 372 WEEGKIN--EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
W G+++ +A+ M ++G+ Y L G+ + A+ + E++++ K
Sbjct: 78 WSHGRLSPPDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRN-EGCK 136
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P TF LI + G + + +F+ +K C P+I T N +L V+ +N M S+ +
Sbjct: 137 PNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGV 196
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F+E RA G+ P+ T+++++ + + ++ VYK M +G D
Sbjct: 197 FKEMKRA---GFV----------PERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPD 243
Query: 549 QTKHAWLLVEASRAG 563
+ + +L +R G
Sbjct: 244 LSSYNAVLAALARGG 258
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 119/542 (21%), Positives = 217/542 (40%), Gaps = 74/542 (13%)
Query: 44 LSPSQQQALAEEQHFQTLKREFKMFRRAVAAKSGDPLVGKPWE--RIERLKFRQLASE-S 100
L P Q + + + H K F+ R +S DP GKPW R+ R L S +
Sbjct: 61 LLPHQHPSSSTQPHLP--KPTFRT--RTRIGRSHDPNRGKPWSHHRLSTQGQRILDSLLN 116
Query: 101 KEFAGDNLKRENLRELKEMFEKDLNWVLD------------------DDVQLGSDYFAKN 142
EF +L E L +L E LN+ D +++ L YF +N
Sbjct: 117 PEFDSSSLD-EILLQLFETSSDGLNFTSDSVSFDILGIIKGLVFYKKNELALCVFYFVRN 175
Query: 143 VEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGD 202
E S + V++ L + + + + G+ L+
Sbjct: 176 REDFASILSNS---VVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYAS 232
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
G +R+A+ V L+++ + Y +L + GK G P + ++ + P
Sbjct: 233 NGRYREAVMVFK---KLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAP 289
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D+ Y+++ + + L +E ++ E M+ PD V YNA+L+
Sbjct: 290 DLYTYNTLISSCRRGSLYEEAAEVFEEMKAAG---------------FSPDKVTYNALLD 334
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA 382
S + + V K++ SG PS TY L+ A+ +G ++EA+
Sbjct: 335 VYGKSRRPREAMEVLKEMEASGFAPSIVTY------------NSLISAYARDGLLDEAME 382
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 442
M ++G+ Y L G+ AM V E+++ + +P TF LI
Sbjct: 383 LKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR-VAGCQPNICTFNALIKMH 441
Query: 443 MDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
+ G+ + + +F+ +K C P+I T N +L V+ +N M S+ +F+E RA G+
Sbjct: 442 GNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA---GFV 498
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
P+ T+++++ A + ++ +Y+ M +G D + + +L +R
Sbjct: 499 ----------PERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALAR 548
Query: 562 AG 563
G
Sbjct: 549 GG 550
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/401 (18%), Positives = 148/401 (36%), Gaps = 81/401 (20%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+ L+ + G G E +++F ++ C PDI ++++ GQ G+ E+ + +
Sbjct: 433 TFNALIKMHGNRGNFVEMMKVFE-EIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKE 491
Query: 290 MRQK---PSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
M++ P + N ++R+ D + PDL YNAVL A
Sbjct: 492 MKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGL 551
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
W+ V +++ KP+ TY + +Y GK E ++A+
Sbjct: 552 WEQSEKVLAEMKDGRCKPNELTYCSLLHAY-------------ANGKEVERMSALAEEIY 598
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
G++ +V + + + + L+ E ++ LE+ G
Sbjct: 599 SGIIEPQAVLLKTLVLV-----YSKSDLLTETERAF-----LELREQGF----------- 637
Query: 450 DCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
P+I T+NAM+ +Y R M SK E+ SG+T
Sbjct: 638 -------------SPDITTLNAMVSIYGRRRMVSKTNEIL---NFIKDSGFT-------- 673
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
P TY+S++ + +E E + + + G + D ++ R G+
Sbjct: 674 --PSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEAS 731
Query: 570 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
F + + G P + + + S + +A+ ++ M
Sbjct: 732 RIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYM 772
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 119/542 (21%), Positives = 217/542 (40%), Gaps = 74/542 (13%)
Query: 44 LSPSQQQALAEEQHFQTLKREFKMFRRAVAAKSGDPLVGKPWE--RIERLKFRQLASE-S 100
L P Q + + + H K F+ R +S DP GKPW R+ R L S +
Sbjct: 61 LLPHQHPSSSTQPHLP--KPTFRT--RTRIGRSHDPNRGKPWSHHRLSTQGQRILDSLLN 116
Query: 101 KEFAGDNLKRENLRELKEMFEKDLNWVLD------------------DDVQLGSDYFAKN 142
EF +L E L +L E LN+ D +++ L YF +N
Sbjct: 117 PEFDSSSLD-EILLQLFETSSDGLNFTSDSVSFDILGIIKGLVFYKKNELALCVFYFVRN 175
Query: 143 VEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGD 202
E S + V++ L + + + + G+ L+
Sbjct: 176 REDFASILSNS---VVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYAS 232
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
G +R+A+ V L+++ + Y +L + GK G P + ++ + P
Sbjct: 233 NGRYREAVMVFK---KLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAP 289
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D+ Y+++ + + L +E ++ E M+ PD V YNA+L+
Sbjct: 290 DLYTYNTLISSCRRGSLYEEAAEVFEEMKAAG---------------FSPDKVTYNALLD 334
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA 382
S + + V K++ SG PS TY L+ A+ +G ++EA+
Sbjct: 335 VYGKSRRPREAMEVLKEMEASGFAPSIVTY------------NSLISAYARDGLLDEAME 382
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 442
M ++G+ Y L G+ AM V E+++ + +P TF LI
Sbjct: 383 LKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMR-VAGCQPNICTFNALIKMH 441
Query: 443 MDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
+ G+ + + +F+ +K C P+I T N +L V+ +N M S+ +F+E RA G+
Sbjct: 442 GNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA---GFV 498
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
P+ T+++++ A + ++ +Y+ M +G D + + +L +R
Sbjct: 499 ----------PERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALAR 548
Query: 562 AG 563
G
Sbjct: 549 GG 550
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/401 (18%), Positives = 148/401 (36%), Gaps = 81/401 (20%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+ L+ + G G E +++F ++ C PDI ++++ GQ G+ E+ + +
Sbjct: 433 TFNALIKMHGNRGNFVEMMKVFE-EIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKE 491
Query: 290 MRQK---PSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
M++ P + N ++R+ D + PDL YNAVL A
Sbjct: 492 MKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGL 551
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
W+ V +++ KP+ TY + +Y GK E ++A+
Sbjct: 552 WEQSEKVLAEMKDGRCKPNELTYCSLLHAY-------------ANGKEVERMSALAEEIY 598
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
G++ +V + + + + L+ E ++ LE+ G
Sbjct: 599 SGIIEPQAVLLKTLVLV-----YSKSDLLTETERAF-----LELREQGF----------- 637
Query: 450 DCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
P+I T+NAM+ +Y R M SK E+ SG+T
Sbjct: 638 -------------SPDITTLNAMVSIYGRRRMVSKTNEIL---NFIKDSGFT-------- 673
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
P TY+S++ + +E E + + + G + D ++ R G+
Sbjct: 674 --PSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEAS 731
Query: 570 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
F + + G P + + + S + +A+ ++ M
Sbjct: 732 RIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYM 772
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 177/434 (40%), Gaps = 46/434 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++ LG +G ++LD + L L R YT +L L +AGR A+ +F L
Sbjct: 143 VVRALGREGQHDAVCALLDEM-PLPPGSRLDVR-AYTTVLHALSRAGRYERAVELFA-EL 199
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ P + Y+ V G++G +V L++ MR +EPD
Sbjct: 200 RRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAG---------------VEPDD 244
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+ V+ AC F+ L+ G P TY L++ F +
Sbjct: 245 FTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTY------------NALLQVFGKA 292
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
G EA+ ++ MEQ G A Y ELA G +++A ++ + S + P T
Sbjct: 293 GNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTS-KGLLPNAFT 351
Query: 435 FTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+ ++ + + G +D+ +++F MK C PN+ T N +L + + F+ E+ E +
Sbjct: 352 YNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMS 411
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
R+ + P+ T+++ML +Y V +GM G +L + +
Sbjct: 412 RSGCT-------------PNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYN 458
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 613
L+ R G ++ + AG P + +L Q ++ A ++++ M
Sbjct: 459 TLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTK 518
Query: 614 PFHITERQWTELFE 627
F ++ ++ L +
Sbjct: 519 GFKPNDQSYSLLLQ 532
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 147/394 (37%), Gaps = 101/394 (25%)
Query: 224 DLKSR------FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
DLK+R Y LL + GKAG EALR+ M +D PD Y+ +A T +
Sbjct: 269 DLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQD-GCQPDAVTYNELAGTYARA 327
Query: 278 GLLKELVKLIERMRQK---PSKRIKNMHRKNWDPVLE-----------------PDLVVY 317
G +E K ++ M K P+ N + + + P++ Y
Sbjct: 328 GFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTY 387
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL--------AMESY--------RR 361
N +L ++ + + ++ +SG P+ T+ ME Y +
Sbjct: 388 NFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKS 447
Query: 362 CLLKV-------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
C +++ L+ A+ G A M G + Y L L G W
Sbjct: 448 CGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWST 507
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI-------------------- 454
A +V K+++ + KP + +++ L+ GG+I +I
Sbjct: 508 AQSIVSKMRT-KGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLV 566
Query: 455 ---------------FQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
FQ +K P++ N+ML +Y++N M+SK E+F+ ++
Sbjct: 567 IANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSG-- 624
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASA-TAHQWE 531
L PD TY+S+++ A + WE
Sbjct: 625 -----------LSPDLITYNSLMDMYAKCSESWE 647
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 81/442 (18%), Positives = 158/442 (35%), Gaps = 111/442 (25%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
K + M GL+ ++ G+ G +A+++ D +K + + Y +L
Sbjct: 335 KCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQ---MKKSGCVPNVNTYNFIL 391
Query: 236 AILGKAGRPHEALRIFNLMLE--------DCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+LGK R F +MLE C P+ ++++ G+ G+ + +++
Sbjct: 392 GMLGKKSR-------FTVMLEMLGEMSRSGCT--PNRVTWNTMLAVCGKRGMEDYVTRVL 442
Query: 288 ERMRQ---KPSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLNACVPS 327
E M+ + S+ N M+ + P L YNA+LN
Sbjct: 443 EGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQ 502
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-----------------------CLL 364
W + ++R G KP+ +Y L ++ Y + +L
Sbjct: 503 GDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVIL 562
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
+ LV A ++ ++ A + ++ RG ++ + NG + + + IK
Sbjct: 563 RTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQ 622
Query: 425 --------------------------------LRHS--KPLEITFTGLIISSMDGGHIDD 450
L+ S KP +++ +I G I +
Sbjct: 623 SGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKE 682
Query: 451 CISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
I M D P + T + ++ Y+ +MFS+A+E+ + N
Sbjct: 683 AQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHN------------- 729
Query: 510 LKPDEYTYSSMLEASATAHQWE 531
LKP E TY ++++ A ++E
Sbjct: 730 LKPMELTYRRVVDSYCKAKRFE 751
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 108/490 (22%), Positives = 192/490 (39%), Gaps = 88/490 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G G R+A +L+ + G D+ Y +++ KAG + AL + + M
Sbjct: 143 LIRGFCRMGKTRKAAKILEVLEGSGAVPDV---ITYNVMISGYCKAGEINNALSVLDRM- 198
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ PD+ Y+++ +L G LK+ +++++RM Q+ PD++
Sbjct: 199 ---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY---------------PDVI 240
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y ++ A + ++R G P TY VLV +EG
Sbjct: 241 TYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTY------------NVLVNGICKEG 288
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEIT 434
+++EA+ + +M G + + +C+ GRW DA L+ + ++ + P +T
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR--KGFSPSVVT 346
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
F LI G + I I + M H C+PN + N +L + + +A E E
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE--- 403
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE-------------------YFE 534
R S G PD TY++ML A + E +
Sbjct: 404 RMVSRG----------CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 535 YVYKGMALSG----------------CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 578
V G+A +G + D ++ L+ SR GK F
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 579 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES-NEDRISRDK 637
G P+ + F +++ ++A+ + M TE +T L E + ++++
Sbjct: 514 GVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEA 573
Query: 638 LEKLLNALCN 647
LE LLN LCN
Sbjct: 574 LE-LLNELCN 582
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 177/413 (42%), Gaps = 44/413 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL-KELVKLIER 289
YT L++ +AGR +A+ +F M+ D + P I Y+ V ++ + KE+V+L+
Sbjct: 175 YTALVSAFSRAGRFRDAVAVFRRMV-DSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 233
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M++ + PD YN +++ C +K VF +++ SG +P
Sbjct: 234 MKEHG---------------VAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDK 278
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
T+ ++ Y + + +EA+ ++ ME+ G + Y L +
Sbjct: 279 VTFNSLLDVYGKAR------------RHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKD 326
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
G + A+ + ++++ ++ KP +T+T LI G ID I + M ++ C+PN+ T
Sbjct: 327 GLLEQAVALKQEME-VKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCT 385
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
NA++K++ F + +F+E S+G+ PD T++++L
Sbjct: 386 YNALIKMHGVRGKFPEMMAVFDEL---RSAGFV----------PDIVTWNTLLAVFGQNG 432
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
V+K M +G ++ + L+ SR G L + ++EAG P +
Sbjct: 433 LDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYN 492
Query: 589 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKL 641
+L +E+A L M E ++ L + + DK++ L
Sbjct: 493 AVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKAL 545
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 124/281 (44%), Gaps = 26/281 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD Y A+++A + +++ VF+++ SG++P+ TY + + Y + +
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVP------ 223
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
W+ E V V +M++ GV Y L C +++A V +++K+ +P
Sbjct: 224 WK-----EVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKA-SGFEPD 277
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
++TF L+ D+ I + Q M + C P++ T N+++ Y ++ + +A L +
Sbjct: 278 KVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQ 337
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E +KPD TY++++ A + + Y M +GC+ +
Sbjct: 338 EMEVKG-------------IKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC 384
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ GK + FD L AG +P + + +L
Sbjct: 385 TYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLL 425
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/387 (19%), Positives = 142/387 (36%), Gaps = 92/387 (23%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K G +G + + M+V D L+ + + LLA+ G+ G E +F M
Sbjct: 389 LIKMHGVRGKFPEMMAVFDE---LRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEM- 444
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ Y S+ + + GL +++ +RM + + PD+
Sbjct: 445 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG---------------IYPDVS 489
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY---------------- 359
YNAVL+A +W+ +F ++ + KP +Y + +Y
Sbjct: 490 TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDI 549
Query: 360 -------------------------------------RRC-----LLKVLVRAFWEEGKI 377
+RC +L +V + + +
Sbjct: 550 YSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMV 609
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+ + M++ + +A+ Y L G + ++ +IKS +P ++
Sbjct: 610 RKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKS-SGVRPDRYSYNT 668
Query: 438 LIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
+I + G + + +F MK +P++ T N +K Y N MF +A EL
Sbjct: 669 VIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVR------ 722
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEA 523
Y G KP+E TY+S++E
Sbjct: 723 ---YMVTQG----CKPNERTYNSIVEG 742
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 12/116 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ PD YN V+ A Q K +F +++ SGLKP TY + V+
Sbjct: 659 VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTY------------NIFVK 706
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
++ EA+ VR M +G Y + C NG+ DA + V + L
Sbjct: 707 SYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQL 762
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 121/318 (38%), Gaps = 70/318 (22%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ R Y L++ + G A++I+ M+E +YPD++ Y++V L + G ++
Sbjct: 450 IPERDTYVSLISSYSRCGLFDLAMQIYKRMME-AGIYPDVSTYNAVLSALARGGRWEQAE 508
Query: 285 KLIERMRQKPSK--------------------RIKNMHRKNWDPVLEP------DLVVYN 318
KL M ++ K ++K + + +EP LV+ N
Sbjct: 509 KLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVN 568
Query: 319 A-------------------------VLNACVP----SHQWKGVFWVFKQLRKSGLKPSA 349
+ VLNA V + + V + +++S + SA
Sbjct: 569 SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSA 628
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
ATY M Y R G + + ++ GV Y +
Sbjct: 629 ATYNSLMHMYSRL------------GDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRK 676
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 468
G+ ++A + ++K KP +T+ + S + ++ I + ++M C+PN T
Sbjct: 677 GQMKEASRLFSEMKC-SGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERT 735
Query: 469 VNAMLKVYSRNDMFSKAK 486
N++++ Y RN + AK
Sbjct: 736 YNSIVEGYCRNGKLTDAK 753
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 177/413 (42%), Gaps = 44/413 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL-KELVKLIER 289
YT L++ +AGR +A+ +F M+ D + P I Y+ V ++ + KE+V+L+
Sbjct: 157 YTALVSAFSRAGRFRDAVAVFRRMV-DSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 215
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M++ + PD YN +++ C +K VF +++ SG +P
Sbjct: 216 MKEHG---------------VAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDK 260
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
T+ ++ Y + + +EA+ ++ ME+ G + Y L +
Sbjct: 261 VTFNSLLDVYGKA------------RRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKD 308
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
G + A+ + ++++ ++ KP +T+T LI G ID I + M ++ C+PN+ T
Sbjct: 309 GLLEQAVALKQEME-VKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCT 367
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
NA++K++ F + +F+E S+G+ PD T++++L
Sbjct: 368 YNALIKMHGVRGKFPEMMAVFDEF---RSAGFV----------PDIVTWNTLLAVFGQNG 414
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
V+K M +G ++ + L+ SR G L + ++EAG P +
Sbjct: 415 LDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYN 474
Query: 589 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKL 641
+L +E+A L M E ++ L + + DK++ L
Sbjct: 475 AVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKAL 527
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 123/281 (43%), Gaps = 26/281 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD Y A+++A + +++ VF+++ SG++P+ TY + + Y + +
Sbjct: 152 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVP------ 205
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
W+ E V V +M++ GV Y L C +++A V +++K+ +P
Sbjct: 206 WK-----EVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKA-SGFEPD 259
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
++TF L+ D+ I + Q M + C P++ T N+++ Y ++ + +A L +
Sbjct: 260 KVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQ 319
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E +KPD TY++++ A + + Y M +GC+ +
Sbjct: 320 EMEVKG-------------MKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC 366
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ GK + FD AG +P + + +L
Sbjct: 367 TYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLL 407
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/387 (19%), Positives = 141/387 (36%), Gaps = 92/387 (23%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K G +G + + M+V D D+ + LLA+ G+ G E +F M
Sbjct: 371 LIKMHGVRGKFPEMMAVFDEFRSAGFVPDI---VTWNTLLAVFGQNGLDSEVSGVFKEM- 426
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ Y S+ + + GL +++ +RM + + PD+
Sbjct: 427 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG---------------IYPDVS 471
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY---------------- 359
YNAVL+A +W+ +F ++ + KP +Y + +Y
Sbjct: 472 TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDI 531
Query: 360 -------------------------------------RRC-----LLKVLVRAFWEEGKI 377
+RC +L +V + + +
Sbjct: 532 YSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMV 591
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+ + M++ + +A+ Y L G + ++ +IKS +P ++
Sbjct: 592 RKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKS-SGVRPDRYSYNT 650
Query: 438 LIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
+I + G + + +F MK +P++ T N +K Y N MF +A EL
Sbjct: 651 VIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVR------ 704
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEA 523
Y G KP+E TY+S++E
Sbjct: 705 ---YMVTQG----CKPNERTYNSIVEG 724
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 12/116 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ PD YN V+ A Q K +F +++ SGLKP TY + V+
Sbjct: 641 VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTY------------NIFVK 688
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
++ EA+ VR M +G Y + C NG+ DA + V + L
Sbjct: 689 SYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQL 744
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 88/232 (37%), Gaps = 18/232 (7%)
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
A A R + GV+ V + GR +A +++ P +T L+
Sbjct: 107 AAVAARELHGEGVLHHPRVLATAIRVMARAGRLAEASALLDAAPG-----PDAGAYTALV 161
Query: 440 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
+ G D +++F+ M D +P I T N +L VYS+ M KE+ E
Sbjct: 162 SAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSK--MAVPWKEVVELVASMKEH 219
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
G + PD YTY++++ ++ V+ M SG + D+ LL
Sbjct: 220 G----------VAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDV 269
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+A + + G P + + ++ + E+AVAL M
Sbjct: 270 YGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM 321
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 121/318 (38%), Gaps = 70/318 (22%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ R Y L++ + G A++I+ M+E +YPD++ Y++V L + G ++
Sbjct: 432 IPERDTYVSLISSYSRCGLFDLAMQIYKRMME-AGIYPDVSTYNAVLSALARGGRWEQAE 490
Query: 285 KLIERMRQKPSK--------------------RIKNMHRKNWDPVLEP------DLVVYN 318
KL M ++ K ++K + + +EP LV+ N
Sbjct: 491 KLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVN 550
Query: 319 A-------------------------VLNACVP----SHQWKGVFWVFKQLRKSGLKPSA 349
+ VLNA V + + V + +++S + SA
Sbjct: 551 SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSA 610
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
ATY M Y R G + + ++ GV Y +
Sbjct: 611 ATYNSLMHMYSRL------------GDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRK 658
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 468
G+ ++A + ++K KP +T+ + S + ++ I + ++M C+PN T
Sbjct: 659 GQMKEASRLFSEMKC-SGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERT 717
Query: 469 VNAMLKVYSRNDMFSKAK 486
N++++ Y RN + AK
Sbjct: 718 YNSIVEGYCRNGKLTDAK 735
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 177/413 (42%), Gaps = 44/413 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL-KELVKLIER 289
YT L++ +AGR +A+ +F M+ D + P I Y+ V ++ + KE+V+L+
Sbjct: 175 YTALVSAFSRAGRFRDAVAVFRRMV-DSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 233
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M++ + PD YN +++ C +K VF +++ SG +P
Sbjct: 234 MKEHG---------------VAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDK 278
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
T+ ++ Y + + +EA+ ++ ME+ G + Y L +
Sbjct: 279 VTFNSLLDVYGKAR------------RHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKD 326
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
G + A+ + ++++ ++ KP +T+T LI G ID I + M ++ C+PN+ T
Sbjct: 327 GLLEQAVALKQEME-VKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCT 385
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
NA++K++ F + +F+E S+G+ PD T++++L
Sbjct: 386 YNALIKMHGVRGKFPEMMAVFDEF---RSAGFV----------PDIVTWNTLLAVFGQNG 432
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
V+K M +G ++ + L+ SR G L + ++EAG P +
Sbjct: 433 LDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYN 492
Query: 589 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKL 641
+L +E+A L M E ++ L + + DK++ L
Sbjct: 493 AVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKAL 545
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 123/281 (43%), Gaps = 26/281 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD Y A+++A + +++ VF+++ SG++P+ TY + + Y + +
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVP------ 223
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
W+ E V V +M++ GV Y L C +++A V +++K+ +P
Sbjct: 224 WK-----EVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKA-SGFEPD 277
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
++TF L+ D+ I + Q M + C P++ T N+++ Y ++ + +A L +
Sbjct: 278 KVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQ 337
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E +KPD TY++++ A + + Y M +GC+ +
Sbjct: 338 EMEVKG-------------MKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC 384
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ GK + FD AG +P + + +L
Sbjct: 385 TYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLL 425
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 75/387 (19%), Positives = 141/387 (36%), Gaps = 92/387 (23%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K G +G + + M+V D D+ + LLA+ G+ G E +F M
Sbjct: 389 LIKMHGVRGKFPEMMAVFDEFRSAGFVPDI---VTWNTLLAVFGQNGLDSEVSGVFKEM- 444
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ Y S+ + + GL +++ +RM + + PD+
Sbjct: 445 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG---------------IYPDVS 489
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY---------------- 359
YNAVL+A +W+ +F ++ + KP +Y + +Y
Sbjct: 490 TYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDI 549
Query: 360 -------------------------------------RRC-----LLKVLVRAFWEEGKI 377
+RC +L +V + + +
Sbjct: 550 YSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMV 609
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+ + M++ + +A+ Y L G + ++ +IKS +P ++
Sbjct: 610 RKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKS-SGVRPDRYSYNT 668
Query: 438 LIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
+I + G + + +F MK +P++ T N +K Y N MF +A EL
Sbjct: 669 VIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVR------ 722
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEA 523
Y G KP+E TY+S++E
Sbjct: 723 ---YMVTQG----CKPNERTYNSIVEG 742
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 12/116 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ PD YN V+ A Q K +F +++ SGLKP TY + V+
Sbjct: 659 VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTY------------NIFVK 706
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
++ EA+ VR M +G Y + C NG+ DA + V + L
Sbjct: 707 SYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQL 762
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 121/318 (38%), Gaps = 70/318 (22%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ R Y L++ + G A++I+ M+E +YPD++ Y++V L + G ++
Sbjct: 450 IPERDTYVSLISSYSRCGLFDLAMQIYKRMME-AGIYPDVSTYNAVLSALARGGRWEQAE 508
Query: 285 KLIERMRQKPSK--------------------RIKNMHRKNWDPVLEP------DLVVYN 318
KL M ++ K ++K + + +EP LV+ N
Sbjct: 509 KLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVN 568
Query: 319 A-------------------------VLNACVP----SHQWKGVFWVFKQLRKSGLKPSA 349
+ VLNA V + + V + +++S + SA
Sbjct: 569 SKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSA 628
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
ATY M Y R G + + ++ GV Y +
Sbjct: 629 ATYNSLMHMYSRL------------GDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRK 676
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 468
G+ ++A + ++K KP +T+ + S + ++ I + ++M C+PN T
Sbjct: 677 GQMKEASRLFSEMKC-SGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERT 735
Query: 469 VNAMLKVYSRNDMFSKAK 486
N++++ Y RN + AK
Sbjct: 736 YNSIVEGYCRNGKLTDAK 753
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 182/419 (43%), Gaps = 71/419 (16%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
D++SR TKL+ L + GRP EA IFN ++E+ + P I Y ++ L + L
Sbjct: 318 DVRSR---TKLMNGLIERGRPQEAHSIFNTLIEEGH-KPSIITYTTLVTALTRQKHFHSL 373
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ LI ++++ L PD +++NA++NA S +F+++++S
Sbjct: 374 LSLISKVQKNG---------------LRPDTILFNAIINASSESGNLDQAMKIFEKMKES 418
Query: 344 GLKPSAATYGLAMESY--------------------------RRCLLKVLVRAFWEEGKI 377
G KP+A+T+ ++ Y R C +LV+A+ + KI
Sbjct: 419 GCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLRDEMLQPNDRTC--NILVQAWCNQRKI 476
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITF 435
EA V M+ GV A + LA G A ++ I + H+ KP T
Sbjct: 477 EEAWNIVYKMQSFGVKPDAVTFNTLARAYSRIGSTCTAEDMI--IPRMLHNKVKPNVRTC 534
Query: 436 TGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVY-SRNDM--FSKAKELFEE 491
++ + G +++ + F MK+ PN+ N+++K + + NDM + +L EE
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE 594
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
+KPD T+S+++ A ++ + E +Y+ M G D
Sbjct: 595 FG----------------VKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHA 638
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ L +RAG+ E + + + G P+ + +T+++ +KA+ + N M
Sbjct: 639 FSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKM 697
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 166/408 (40%), Gaps = 48/408 (11%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
W +AM +L+ V ++ S Y ++ K GR EA+ + ML + ++ D+
Sbjct: 233 WEEAMDLLEEVI---EQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTN-DIPADVI 288
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
+Y SV G+ KE + L+E+MR + + P+++ YN+ ++AC
Sbjct: 289 SYSSVIAACGRGRRWKEAMDLLEQMRTQG---------------VSPNVISYNSAIDACA 333
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
+WK + +++ GL P+ +Y A + C + G+ EA+ ++
Sbjct: 334 KGDRWKEALDLLREMTTVGLVPTVISYNSATAA---CAVN---------GRWVEALELLK 381
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M +G+ Y G+W+ A+ ++ + ++ S P I+F I + G
Sbjct: 382 EMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTV-GSDPDIISFNSAIDACGRG 440
Query: 446 GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE-TTRANSSGYTFL 503
+ + + + M PN+ T N+ ++ R+ + +A LF E TR
Sbjct: 441 QQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRG-------- 492
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
L P+ TY+SM++A A QWE + GM G D + + +
Sbjct: 493 ------LSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGE 546
Query: 564 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ L + G P + + + + +A+ L+ MA
Sbjct: 547 QWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMA 594
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 170/432 (39%), Gaps = 61/432 (14%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
WR A++ LD D S Y +A + A+R+ M + + PD+
Sbjct: 91 WRTALAALDEFKISGGSLDTTS---YNIAIAACSNGRQWATAVRLLREMPTE-GVTPDVV 146
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y+S + G KE + L+ +M P++ I PD+V YN+ + AC
Sbjct: 147 TYNSAIAACSKGGRWKEAMDLLTQM-VAPTEGIT------------PDVVTYNSAIAACS 193
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY---RRCLLKVLVRAFWEEGKINEAVA 382
+WK + +Q+ G+ P+ TY A+ + RR WE EA+
Sbjct: 194 NGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRR----------WE-----EAMD 238
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIIS 441
+ + ++G + Y + GRW +AM ++ ++ L + P + I+++ +I +
Sbjct: 239 LLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQM--LTNDIPADVISYSSVIAA 296
Query: 442 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN--SS 498
G + + + + M+ PN+ + N+ + ++ D + +A +L E T +
Sbjct: 297 CGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPT 356
Query: 499 GYTFLSGDGA--------------------PLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
++ S A + P+ +Y+S L+A A QWE + +
Sbjct: 357 VISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLR 416
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
GM+ G D + R + + AG P+ + + + +
Sbjct: 417 GMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSA 476
Query: 599 NYEKAVALINAM 610
+++A+ L M
Sbjct: 477 RWQEAMGLFREM 488
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 137/345 (39%), Gaps = 48/345 (13%)
Query: 201 GDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNL 260
GD+ W++A LD + + + + Y A GR EAL + M +
Sbjct: 335 GDR--WKEA---LDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQ-GI 388
Query: 261 YPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAV 320
P+ +Y+S + G ++ VKL+ M S +PD++ +N+
Sbjct: 389 APNTISYNSALDACAKGGQWEKAVKLLRGMSTVGS---------------DPDIISFNSA 433
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA 380
++AC QW+ + +++ +GL P+ TY A+E+ R A W+ EA
Sbjct: 434 IDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGR-------SARWQ-----EA 481
Query: 381 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 440
+ R M RG+ Y + +W+ A+ ++ + + R P I++ I
Sbjct: 482 MGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPA-RGVAPDVISYNSAIE 540
Query: 441 SSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 499
+ G + + + + M +P+I + N+ + +++ + +A L ++
Sbjct: 541 ACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVG--- 597
Query: 500 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
L P+ +Y + + A QW+ + K M G
Sbjct: 598 ----------LTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHG 632
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 19/166 (11%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
++ G W A+ +L + K D+ S Y + K+GR EAL + M
Sbjct: 539 IEACGKGEQWELALQLLKGMPTRGPKPDIIS---YNSAVTACAKSGRWREALGLLKDM-A 594
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
L P+ +Y + G+ V++++ M+ + P+L+
Sbjct: 595 TVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGAT---------------PNLIT 639
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
Y+A ++AC +WK + LR+ GL P A TY + +++RC
Sbjct: 640 YSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAFQRC 685
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/254 (18%), Positives = 99/254 (38%), Gaps = 43/254 (16%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR------F 229
+ +R M +GL ++ G W++AM + R++ +R
Sbjct: 448 ELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLF---------REMPTRGLSPNVV 498
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y ++ K + A+++ M + PD+ +Y+S G+ + ++L++
Sbjct: 499 TYNSMIDACAKGEQWELAVQLLTGMPAR-GVAPDVISYNSAIEACGKGEQWELALQLLKG 557
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + K PD++ YN+ + AC S +W+ + K + GL P+
Sbjct: 558 MPTRGPK---------------PDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNT 602
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+YG A + A + + + AV ++ M+ G Y
Sbjct: 603 VSYGAA------------IHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQ 650
Query: 410 GRWQDAMLVVEKIK 423
GRW++A+ ++ ++
Sbjct: 651 GRWKEAVDLLTDLR 664
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 105/513 (20%), Positives = 217/513 (42%), Gaps = 58/513 (11%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G + + +V+D + K + + YT ++ G+AG+ +AL++FN M + P+
Sbjct: 387 GFYEEGATVIDT---MTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQM-KKSGCVPN 442
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y+S+ LG+ +E++K++ MR N P P+ + +N +L
Sbjct: 443 VCTYNSILALLGKKSRSEEMIKILSDMRI------------NGCP---PNRITWNTLLAM 487
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
C + K V VF++++ G +P T+ + +Y RC ++ ++E
Sbjct: 488 CGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDE--------- 538
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 443
M + G A+ Y L L G W+ A V+ +++ + KP E +F+ ++
Sbjct: 539 ---MMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRN-KGFKPNETSFSLMLHCYA 594
Query: 444 DGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
GG++ I + + D P+ + ++ + + FEE + +GY
Sbjct: 595 KGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMK---NGY-- 649
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
KPD ++SML A + +E + + + SG Q D + L+ +R
Sbjct: 650 --------KPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARR 701
Query: 563 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQW 622
G+C E L+++GE P + + ++ Q ++A+ +++ M +
Sbjct: 702 GECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTY 761
Query: 623 TELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHF 682
R +++++++ + N +E+T + + C++ K +D + F
Sbjct: 762 NTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKII---VDGYCKARKYQD-AMDFIF 817
Query: 683 GSQAIDISPLHGIHEAFDVKETENVPSSSASMM 715
G + ID ++FD T+ + S MM
Sbjct: 818 GIKNID--------DSFDNHSTQRLASHVRDMM 842
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/457 (19%), Positives = 188/457 (41%), Gaps = 50/457 (10%)
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA-ILGKAGRPHEAL 248
E ++ LLK L G +A+ + +WV D+K +L+ ILG+ + AL
Sbjct: 158 EVDIVSLLKALDVLGKSERAILLFEWVVSNSVSGDVKLDSKAVELMIRILGRESKYSIAL 217
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNM---- 301
++ + + D D+ A ++ + G K+ + + ERM+ PS N+
Sbjct: 218 KLLDKIPID-KYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDV 276
Query: 302 ---HRKNWDPVLEP-----------DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
++WD +L+ D + V++AC F +L+ SG +P
Sbjct: 277 YGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEP 336
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
TY L++ F + G +EA+ ++ ME + Y EL
Sbjct: 337 GTVTY------------NALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYV 384
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
G +++ V++ + + + P +T+T +I + G + +F M K C PN+
Sbjct: 385 RAGFYEEGATVIDTM-TRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNV 443
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T N++L + + S+++E+ + + + +G P P+ T++++L
Sbjct: 444 CTYNSILALLGKK---SRSEEMIKILSD--------MRINGCP--PNRITWNTLLAMCGD 490
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
+ ++ +V++ M G + + L+ R G +D +++AG P
Sbjct: 491 KGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATT 550
Query: 587 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 623
+ +L + +++ A +++ M F E ++
Sbjct: 551 YNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFS 587
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 125/318 (39%), Gaps = 27/318 (8%)
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
R C ++ A+ GK +A+A M+ G+ + Y + GR D +L
Sbjct: 233 RAC--TTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKIL-- 288
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDG--GHIDDCISIFQHMKDHC-EPNIGTVNAMLKVY 476
+ + +R+ FT + S G G I++ F +K EP T NA+L+V+
Sbjct: 289 DLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVF 348
Query: 477 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
+ ++S+A + +E N + D TY+ ++ A A +E V
Sbjct: 349 GKAGIYSEALNILKEMEDNNCT-------------LDSVTYNELVAAYVRAGFYEEGATV 395
Query: 537 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 596
M G + + ++ RAGK F+ + ++G +P+ + +L
Sbjct: 396 IDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGK 455
Query: 597 QSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASS 653
+S E+ + +++ M P IT W L D+ + + + NC
Sbjct: 456 KSRSEEMIKILSDMRINGCPPNRIT---WNTLLAMCGDKGKHKFVNHVFREMKNCGFEPG 512
Query: 654 EITVSNLSRALHALCRSE 671
+ T + L A + C SE
Sbjct: 513 KDTFNTLISA-YGRCGSE 529
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 193/460 (41%), Gaps = 52/460 (11%)
Query: 193 MLKLLKGLGDKGSWRQAMSVLDW-VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
++ LLK L G+W +A+ + +W V L + R ++ ILG+ + A ++F
Sbjct: 151 LISLLKALDYSGNWEKALLLFEWSVLNLGIANEKIDRHAIELMVRILGRESQHTVASKLF 210
Query: 252 NLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMH----- 302
+++ L+D L D+ AY ++ + G +++ ERM + PS N+
Sbjct: 211 DVIPLDDYVL--DVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYG 268
Query: 303 --RKNWDPVLEP-----------DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
++WD +LE D + VL+AC F L+ G KP
Sbjct: 269 KMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGT 328
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L+ F + G +EA++ + ME+ A Y E+
Sbjct: 329 VTY------------NALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRA 376
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGT 468
G ++ +V++ + S + P +T+T +I + G ID + +F Q M+ C PN+ T
Sbjct: 377 GFHEEGAVVIDAMAS-KGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVAT 435
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
NA+L + + K L EE + G+ L+G P+ T+++ML
Sbjct: 436 YNAVLGMLGK-------KSLSEEMMKI--LGHMKLNG----CSPNHITWNTMLAMCGKKG 482
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+Y V++ M G + D+ L+ R G + + +++AG P +
Sbjct: 483 MHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYN 542
Query: 589 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
+L + +++ A ++I M F +E ++ + S
Sbjct: 543 ALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHS 582
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 164/407 (40%), Gaps = 82/407 (20%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ K + + YT ++ G+ G +AL +F+ M+E P++A Y++V LG+
Sbjct: 389 MASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMME-LGCVPNVATYNAVLGMLGKKS 447
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
L +E++K++ M+ P+ + +N +L C K V VF+
Sbjct: 448 LSEEMMKILGHMKLNGC---------------SPNHITWNTMLAMCGKKGMHKYVNQVFR 492
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
+++ G +P T+ + +Y RC G N+A M + G +
Sbjct: 493 EMKNCGFEPDRDTFNTLISAYGRC------------GSNNDAAKMHEEMIKAGFSPCINT 540
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD-------- 450
Y L L G W+ A V+ +++ + +P E +++ ++ S GG++
Sbjct: 541 YNALLNALARRGDWKAAESVILDMRN-KGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSI 599
Query: 451 ---------------------CISI------FQHMKDHC-EPNIGTVNAMLKVYSRNDMF 482
C S+ FQ ++ H +P++ N+ML ++++N+M+
Sbjct: 600 YDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMY 659
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
+A E+ A L+PD T++S+++ A E V + +
Sbjct: 660 DRAHEMLRLIHDAG-------------LQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQT 706
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP-HPLFFT 588
SG + D + ++ R G L++ L E I P FT
Sbjct: 707 SGGKPDLVSYNTVIKGFCRKG---LMQEGIRILSEMTSIGVGPCIFT 750
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 122/313 (38%), Gaps = 23/313 (7%)
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR-WQDAMLVVEKIKS 424
++ A+ GK + A+ M + G+ + Y + GR W + ++++++S
Sbjct: 227 TILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRS 286
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFS 483
R E T + ++ + G ID+ F +K + +P T NA+L V+ + +FS
Sbjct: 287 -RGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFS 345
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
+A + E N PD TY+ ++ A A E V MA
Sbjct: 346 EALSVLSEMEENNCP-------------PDAVTYNEVVAAYVRAGFHEEGAVVIDAMASK 392
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
G + + ++ R G FD ++E G +P+ + +L +S E+
Sbjct: 393 GIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEM 452
Query: 604 VALINAM---AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNL 660
+ ++ M +P HIT W + + + ++ + NC T + L
Sbjct: 453 MKILGHMKLNGCSPNHIT---WNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTL 509
Query: 661 SRALHALCRSEKE 673
A + C S +
Sbjct: 510 ISA-YGRCGSNND 521
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 109/524 (20%), Positives = 220/524 (41%), Gaps = 80/524 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L++GL D+G A+S+LD + +R+ + V YT LL + K+ +A+++ + M
Sbjct: 143 LIRGLCDRGRVGDALSLLDDML----RRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEM 198
Query: 255 -LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
+ C P+I Y+ + + + + + +++ R+ +PD
Sbjct: 199 RAKGCT--PNIVTYNVIINGMCREDRVDDARQILNRLSSYG---------------FQPD 241
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR------------ 361
V Y VL + +W+ V +F ++ ++ P+ T+ + + + R
Sbjct: 242 TVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLD 301
Query: 362 ------C-----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
C L +++ + ++G++++A + NM G Y + LC G
Sbjct: 302 RMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAG 361
Query: 411 RWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 468
RW+DA L+ E ++ ++ P E+TF I G ID I + + M ++ C I T
Sbjct: 362 RWEDAKELLNEMVR--KNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVT 419
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
NA++ + A ELF + P +P+ TY+++L A
Sbjct: 420 YNALVNGFCVQGRVDSALELF----------------NSLPCEPNTITYTTLLTGLCHAE 463
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD---SLLEAGEIPHPL 585
+ + + M + C L+ L+ + G +E A + ++E G P+ +
Sbjct: 464 RLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKG---FVEEAIELVQQMMEHGCTPNLI 520
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE--SNEDRISRDKLEKLLN 643
F +L N E+A+ L++ + + ++ + + S EDRI ++ ++ +
Sbjct: 521 TFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRI--EEAVQMFH 578
Query: 644 ALCNCNAASSEITVSNLSRALHALC-RSEKERDLSSSAHFGSQA 686
A+ + + + + L ALC R E +R + AH S +
Sbjct: 579 AVQDMGMRPKAVMYNKI---LSALCKRCETDRAIDFFAHMVSNS 619
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 180/469 (38%), Gaps = 76/469 (16%)
Query: 193 MLKLLKGLGDKGSWRQAMSVLDW---------------------------VYGLKDKRDL 225
+ LLK L G W A+++L W V L D+ L
Sbjct: 107 ITSLLKALELSGHWEWALALLRWAGKEGAADASALEMVVRALGREGQHDAVCALLDETPL 166
Query: 226 K--SRF---VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL- 279
SR YT +L L +AGR AL +F L + P + Y+ V G++G
Sbjct: 167 PPGSRLDVRAYTTVLHALSRAGRYERALELFA-ELRRQGVAPTLVTYNVVLDVYGRMGRS 225
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+V L++ MR +EPD + V+ AC F+
Sbjct: 226 WPRIVALLDEMRAAG---------------VEPDGFTASTVIAACCRDGLVDEAVAFFED 270
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
L+ G P TY L++ F + G EA+ + MEQ G A Y
Sbjct: 271 LKARGHAPCVVTY------------NALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTY 318
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 458
ELA G +++A ++ + S + P T+ ++ + + G +D+ +++F M
Sbjct: 319 NELAGTYARAGFFEEAARCLDTMAS-KGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMK 377
Query: 459 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
K PN+ T N +L + + F+ E+ E +R+ + P+ T++
Sbjct: 378 KTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCT-------------PNRVTWN 424
Query: 519 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 578
+ML +Y V +GM G +L + + L+ R G ++ + A
Sbjct: 425 TMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSA 484
Query: 579 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 627
G P + +L Q ++ A ++++ M F E+ ++ L +
Sbjct: 485 GFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQ 533
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 153/395 (38%), Gaps = 90/395 (22%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
LL+ G G++ +A+ VL G ++ + V Y +L +AG EA R + M
Sbjct: 286 LLQVFGKAGNYTEALRVL----GEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTM 341
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM------HRKN 305
L P+ Y++V G VG + E + L ++M++ P+ N+ +
Sbjct: 342 ASK-GLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSR 400
Query: 306 WDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ +LE P+ V +N +L C V V + +R G++ S TY
Sbjct: 401 FTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNT 460
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
+ +Y RC G A M G + Y L L G W
Sbjct: 461 LIAAYGRC------------GSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWST 508
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI-------------------- 454
A +V K+++ + KP E +++ L+ GG++ +I
Sbjct: 509 AQSIVSKMRT-KGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTL 567
Query: 455 ----------------FQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
FQ +K P++ N+ML +Y++N M+SKA E+F+ R+
Sbjct: 568 VIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSG- 626
Query: 498 SGYTFLSGDGAPLKPDEYTYSSMLEASA-TAHQWE 531
L PD TY+S+++ A + WE
Sbjct: 627 ------------LSPDLITYNSLMDMYAKCSESWE 649
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/439 (19%), Positives = 158/439 (35%), Gaps = 113/439 (25%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M GL+ ++ G+ G +A+++ D +K + + Y +L +LGK
Sbjct: 341 MASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQ---MKKTGFVPNVNTYNLVLGMLGK 397
Query: 241 AGRPHEALRIFNLMLE--------DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
R F +MLE C P+ ++++ G+ G+ + +++E MR
Sbjct: 398 KSR-------FTVMLEMLGEMSRSGCT--PNRVTWNTMLAVCGKRGMEDYVTRVLEGMRS 448
Query: 293 ---KPSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
+ S+ N M+ + P + YNA+LN W
Sbjct: 449 CGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWST 508
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRR------------------------CLLKVLV 368
+ ++R G KP+ +Y L ++ Y + +L+ LV
Sbjct: 509 AQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLV 568
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK----- 423
A ++ +++ A + ++ RG ++ + NG + A V + IK
Sbjct: 569 IANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLS 628
Query: 424 ---------------------------SLRHS---KPLEITFTGLIISSMDGGHIDDCIS 453
L+ S KP +++ +I G + +
Sbjct: 629 PDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQR 688
Query: 454 IFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
+ M D P T + ++ YS +MFS+A+E+ GY G LKP
Sbjct: 689 VLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVI---------GYMVQHG----LKP 735
Query: 513 DEYTYSSMLEASATAHQWE 531
E TY ++E+ A ++E
Sbjct: 736 MELTYRRVVESYCRAKRFE 754
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 55/307 (17%), Positives = 120/307 (39%), Gaps = 17/307 (5%)
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR-WQDAMLVVEKIKS 424
++ A G+ A+ + ++GV T Y + GR W + +++++++
Sbjct: 179 TVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRA 238
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFS 483
+P T + +I + G +D+ ++ F+ +K P + T NA+L+V+ + ++
Sbjct: 239 -AGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYT 297
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
+A + E + +PD TY+ + A A +E MA
Sbjct: 298 EALRVLGEMEQNGC-------------QPDAVTYNELAGTYARAGFFEEAARCLDTMASK 344
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
G + + ++ GK FD + + G +P+ + +L +S +
Sbjct: 345 GLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVM 404
Query: 604 VALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA 663
+ ++ M+ + W + R D + ++L + +C S T + L A
Sbjct: 405 LEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAA 464
Query: 664 LHALCRS 670
+ C S
Sbjct: 465 -YGRCGS 470
>gi|307105412|gb|EFN53661.1| hypothetical protein CHLNCDRAFT_58444 [Chlorella variabilis]
Length = 1131
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 163/374 (43%), Gaps = 54/374 (14%)
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML---EDCNLYPDIAAY 267
VL ++GL D R L ++ LGK G PH ++F+L+ L P + +
Sbjct: 240 GVLQLLHGL-DSRGL------AMVIKDLGKGGLPHRGAQLFDLLRRLGPGSPLAPLLDEF 292
Query: 268 HSVAVTLGQVGL--LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
++ V L + L E MR + +R N+H ++A++N C+
Sbjct: 293 TFTSMISNCVAQQDLGRAMALAEEMRDRGIER--NVH-------------TFSALMNVCI 337
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
Q+K V++ ++ +G + TY L+ + + G+ EA+A +
Sbjct: 338 KCGQYKLALDVYRDMQAAGCPANVVTY------------NTLIDVYGKSGQWEEALAVLE 385
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M++ + + L + +WQ+A+ V E++ + H P T+ LI + G
Sbjct: 386 QMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMAASSH-PPNTTTYNALISAHSKG 444
Query: 446 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G + +++F+ M + CE ++ T ++++ + + A +LFEE +
Sbjct: 445 GDLPKVLAVFKEMVQKGCERSVITYSSLISACEKAGEWKLALQLFEE-----------MR 493
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
G+G P+ +Y+S++ A A QWE V++ M GC+ D + L+ R G+
Sbjct: 494 GEGC--VPNVISYNSLITACAQGAQWEKAAEVFEQMQRQGCRPDVVSYTALIQAYERGGQ 551
Query: 565 CHLLEHAFDSLLEA 578
AF+ ++ A
Sbjct: 552 WRRALAAFEEMIRA 565
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 131/323 (40%), Gaps = 39/323 (12%)
Query: 274 LGQVGLLKELVKLIERMRQ-KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
LG+ GL +L + +R+ P + P+L D + ++++ CV
Sbjct: 260 LGKGGLPHRGAQLFDLLRRLGPGSPLA--------PLL--DEFTFTSMISNCVAQQDLGR 309
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+ +++R G++ + T+ M +C G+ A+ R+M+ G
Sbjct: 310 AMALAEEMRDRGIERNVHTFSALMNVCIKC------------GQYKLALDVYRDMQAAGC 357
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 452
Y L +G+W++A+ V+E++K R +P+ TF L+I+ + +
Sbjct: 358 PANVVTYNTLIDVYGKSGQWEEALAVLEQMKRER-IQPVTRTFNTLMIACNTSNQWQEAL 416
Query: 453 SIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 511
+++ M P N T NA++ +S+ K +F+E +
Sbjct: 417 RVYEQMAASSHPPNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVI--------- 467
Query: 512 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
TYSS++ A A +W+ +++ M GC + + L+ ++ +
Sbjct: 468 ----TYSSLISACEKAGEWKLALQLFEEMRGEGCVPNVISYNSLITACAQGAQWEKAAEV 523
Query: 572 FDSLLEAGEIPHPLFFTEMLIQA 594
F+ + G P + +T LIQA
Sbjct: 524 FEQMQRQGCRPDVVSYTA-LIQA 545
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 84/186 (45%), Gaps = 24/186 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G W +A++VL+ +K +R + L+ + + EALR++ M
Sbjct: 367 LIDVYGKSGQWEEALAVLEQ---MKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMA 423
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR--------IKNMHRKN-W 306
+ P+ Y+++ + G L +++ + + M QK +R I + W
Sbjct: 424 ASSH-PPNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVITYSSLISACEKAGEW 482
Query: 307 DPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
L+ P+++ YN+++ AC QW+ VF+Q+++ G +P +Y
Sbjct: 483 KLALQLFEEMRGEGCVPNVISYNSLITACAQGAQWEKAAEVFEQMQRQGCRPDVVSYTAL 542
Query: 356 MESYRR 361
+++Y R
Sbjct: 543 IQAYER 548
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/235 (17%), Positives = 98/235 (41%), Gaps = 15/235 (6%)
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
+ A+A M RG+ + L G+++ A+ V +++ + +T+
Sbjct: 307 LGRAMALAEEMRDRGIERNVHTFSALMNVCIKCGQYKLALDVYRDMQAAGCPANV-VTYN 365
Query: 437 GLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
LI G ++ +++ + MK + +P T N ++ + ++ + +A ++E+ +
Sbjct: 366 TLIDVYGKSGQWEEALAVLEQMKRERIQPVTRTFNTLMIACNTSNQWQEALRVYEQMAAS 425
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
+ P+ TY++++ A + V+K M GC+ ++ L
Sbjct: 426 SH-------------PPNTTTYNALISAHSKGGDLPKVLAVFKEMVQKGCERSVITYSSL 472
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ +AG+ L F+ + G +P+ + + ++ + +EKA + M
Sbjct: 473 ISACEKAGEWKLALQLFEEMRGEGCVPNVISYNSLITACAQGAQWEKAAEVFEQM 527
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 174/414 (42%), Gaps = 61/414 (14%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S Y +L L A P A R F+ ML D + P++ Y+ + L G KE + +
Sbjct: 122 SVLAYNAVLLALSDASLP-SARRFFDSMLSD-GVAPNVYTYNILVRALCGRGHRKEALSV 179
Query: 287 IERMRQKP-----------------------SKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ MR ++R+ +M R+ L+P+LV +N+V+N
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGG---LKPNLVTFNSVVNG 236
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
+ + + VF ++ K GL P +Y LV + + G +EA++
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSY------------NTLVGGYCKVGCSHEALSV 284
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 443
M ++G++ + L +C G + A+ +V +++ R + EITFT LI
Sbjct: 285 FAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRE-RGLQMNEITFTALIDGFC 343
Query: 444 DGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
G +DD + + M+ +P++ NA++ Y +A+EL E
Sbjct: 344 KKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM---------- 393
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL---LVEA 559
+ +KPD TYS++L A + + M +G D ++ L L E
Sbjct: 394 ---EAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEE 450
Query: 560 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 613
R G H+L F +++ G P + +T ++ + N E+A++L + M A
Sbjct: 451 KRLGDAHVL---FKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKA 501
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/396 (18%), Positives = 145/396 (36%), Gaps = 62/396 (15%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE----PDLVVY 317
P + AY++V + L L PS R + +D +L P++ Y
Sbjct: 121 PSVLAYNAVLLALSDASL--------------PSAR------RFFDSMLSDGVAPNVYTY 160
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N ++ A K V + +R +G P+A TY LV AF G++
Sbjct: 161 NILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTY------------NTLVAAFCRAGEV 208
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+ A V M + G+ + + +C GR +DA V +++ P +++
Sbjct: 209 DRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVK-EGLAPDGVSYNT 267
Query: 438 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA----KELFEET 492
L+ G + +S+F M + P++ T +++ V + +A +E+ E
Sbjct: 268 LVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERG 327
Query: 493 TRANSSGYTFLSGDG-------------------APLKPDEYTYSSMLEASATAHQWEYF 533
+ N +T L DG ++P Y++++ + +
Sbjct: 328 LQMNEITFTALI-DGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEA 386
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 593
+ + M G + D ++ +L + G H +LE G +P + ++ ++
Sbjct: 387 RELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRV 446
Query: 594 AIVQSNYEKAVALINAMAYAPFHITERQWTELFESN 629
+ A L M E +T L + +
Sbjct: 447 LCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGH 482
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 177/413 (42%), Gaps = 44/413 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL-KELVKLIER 289
YT L++ L +A R +A+ +F M+ + + P + Y+ V ++ + KE++ L++
Sbjct: 179 YTALISALSRASRFRDAVAVFRRMVAN-GVCPALVTYNVVLHVYSKIAVPWKEVLALVDS 237
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
MR K+ P+ D YN +++ C +K VF ++R +G +P
Sbjct: 238 MR------------KDGIPL---DRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDK 282
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
T L L+ + + + +EA+ ++ MEQ G + Y L +
Sbjct: 283 VT------------LNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKD 330
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
G ++A + E+++ ++ +P IT+T L+ G ID I + M ++ C+PN+ T
Sbjct: 331 GLLEEATQLKEEME-VKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCT 389
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
NA++K++ F + +F+E S+G+ PD T++++L
Sbjct: 390 YNALIKLHGVRGKFPEMMIVFDEI---RSAGFV----------PDVVTWNTLLAVFGQNG 436
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
V+K M SG ++ + L+ SR G + ++EAG P +
Sbjct: 437 LDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYN 496
Query: 589 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKL 641
+L +E+A L M E ++ L + + DK++ L
Sbjct: 497 AVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSL 549
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/282 (19%), Positives = 124/282 (43%), Gaps = 26/282 (9%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+PD Y A+++A + +++ VF+++ +G+ P+ TY + + Y + +
Sbjct: 173 DPDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSK------IAV 226
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
W+ E +A V +M + G+ Y L C +++A V +++++ +P
Sbjct: 227 PWK-----EVLALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGF-EP 280
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
++T L+ D+ I + + M + C P++ T N+++ Y ++ + +A +L
Sbjct: 281 DKVTLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLK 340
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
EE ++PD TY++++ A + + Y M +GC+ +
Sbjct: 341 EEMEVKG-------------IEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNL 387
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ GK + FD + AG +P + + +L
Sbjct: 388 CTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLL 429
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/432 (17%), Positives = 158/432 (36%), Gaps = 79/432 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K G +G + + M V D + D+ + LLA+ G+ G E +F M
Sbjct: 393 LIKLHGVRGKFPEMMIVFDEIRSAGFVPDV---VTWNTLLAVFGQNGLDTEVSGVFKEM- 448
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ Y S+ + + GL + +++ +RM + + PD+
Sbjct: 449 KKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRM---------------IEAGIHPDIS 493
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YNAVL+A +W+ +F ++ +P +Y + +Y + +
Sbjct: 494 TYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANA------KKLDKMK 547
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
++E + A R G+V T +LV K+ +L ++
Sbjct: 548 SLSEDIYAERIESHNGLVKT-------------------LVLVNSKVNNLSDTEK----- 583
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
+ + + C +I +NAM+ +Y +N M K +E+ +
Sbjct: 584 -----------------AFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKES 626
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
+ + TY+S++ + E E + + S + D+ + +
Sbjct: 627 S-------------INLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTM 673
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
+ R G+ F + +G +P + + + + S +E+A+ L+ M
Sbjct: 674 IYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGC 733
Query: 616 HITERQWTELFE 627
ER + + +
Sbjct: 734 KPNERTYNTILQ 745
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 30/197 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
V +++I GK G + I +LM E NL A Y+S+ ++G ++ ++
Sbjct: 599 VLNAMISIYGKNGMVKKVEEILSLMKESSINL--STATYNSLMHMYSRLGDCEKCENILT 656
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
++ ++ PD YN ++ A Q K +F +++ SGL P
Sbjct: 657 EIKSSRAR---------------PDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPD 701
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY + ++SY + + +EE A+ VR M G Y + C+
Sbjct: 702 IVTYNIFVKSY-------VANSMFEE-----AIDLVRYMVTHGCKPNERTYNTILQEYCS 749
Query: 409 NGRWQDAMLVVEKIKSL 425
+GR D + + L
Sbjct: 750 HGRIADGKSFISNLPEL 766
>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 607
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/475 (20%), Positives = 189/475 (39%), Gaps = 52/475 (10%)
Query: 204 GSWRQAMSVLDWVYGLKDKRD-LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
G WR+A+ +D G+K L + Y + G+ G+ +A+R+ M + P
Sbjct: 11 GDWRKALRAVD---GMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTE-GAAP 66
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKR-----IKNMHRKN-WDPVLE-- 311
D++AY +V + G K V + M K P R I R W L+
Sbjct: 67 DLSAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLL 126
Query: 312 ---------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
P++++YN+ +N+C + QW+ + K++ GL P +Y A+ + R
Sbjct: 127 REMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGR- 185
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
G+ EA+ +M GV Y N GRW++A+ ++ KI
Sbjct: 186 -----------GGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKI 234
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDM 481
++ + P I+++ +I + G + + + MK PNI T NA + ++
Sbjct: 235 PTVGLT-PNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGR 293
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
+ +A +L E L PD +YSS+++A + +W+ + + M
Sbjct: 294 WKEAIDLLREMPTVG-------------LPPDVVSYSSVIDACSKGDRWKEAIDILREMP 340
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 601
G + + + ++ G+ + + AG + + + ++
Sbjct: 341 TVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWK 400
Query: 602 KAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEIT 656
+A+AL+ M H T ++ ++ K ++LL + A +E+
Sbjct: 401 EALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVC 455
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/436 (19%), Positives = 174/436 (39%), Gaps = 53/436 (12%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
+ G G W +A+ + + ++ Y +A GR EA+ + +
Sbjct: 180 ISACGRGGRWEEALELFE---DMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLR-KIP 235
Query: 257 DCNLYPDIAAYHSVAVTL---GQVGLLKELVKLIERMRQKPS-----------------K 296
L P++ +Y SV GQ + +L++ ++ MR P+ K
Sbjct: 236 TVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWK 295
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
++ R+ L PD+V Y++V++AC +WK + +++ GL P+A +Y A+
Sbjct: 296 EAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAI 355
Query: 357 ESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG-RWQDA 415
++ + G+ EA +R M GV + Y A C G +W++A
Sbjct: 356 DACAK------------GGQWKEAKGLLREMPTAGVTQRV-IGYNSAIAACAKGEQWKEA 402
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLK 474
+ ++ ++ ++ + +++ I + G + + M PN N+ +
Sbjct: 403 LALLREMPTVGLHTTV-FSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAID 461
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
R D + +A +L E L PD ++YSS + A A QW+
Sbjct: 462 ACGRGDQWEEAVDLLREMPTVG-------------LSPDVFSYSSAIAACAKGDQWKEAL 508
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 594
V K M+ +G D + + S+ G+ + + AG P+ + ++ +
Sbjct: 509 AVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDAC 568
Query: 595 IVQSNYEKAVALINAM 610
+ +++ +AL+ M
Sbjct: 569 VRGGQWKEGIALLEEM 584
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 123/293 (41%), Gaps = 42/293 (14%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
++G +ALR + M + D +Y G+ G ++ V+L +R+ P++
Sbjct: 9 RSGDWRKALRAVDGMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRL---LREMPTEGAA 65
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
PDL Y+AV++AC QWK + ++ G+ P A +YG A+ +
Sbjct: 66 ------------PDLSAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINAC 113
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
R G+ A+ +R M R V +Y G+W+ A+ +V
Sbjct: 114 AR------------GGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLV 161
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSR 478
+++ ++ + P I+++ I + GG ++ + +F+ M+ P++ T + + +
Sbjct: 162 KEMATVGLA-PDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACAN 220
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
+ +A L + L P+ +YSS++ A A QW+
Sbjct: 221 GGRWKEAVSLLRKIPTVG-------------LTPNVISYSSVITACAKEGQWK 260
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 19/191 (9%)
Query: 162 VDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKD 221
+D + + K + +R M GL E + G W +A+ +L + +
Sbjct: 425 IDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGL 484
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK 281
D+ F Y+ +A K + EAL + M L PD+ Y+S + G K
Sbjct: 485 SPDV---FSYSSAIAACAKGDQWKEALAVLKEM-SAAGLAPDLICYNSAIDACSKGGRWK 540
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
V L+ MR L P+++ Y++ ++ACV QWK + +++R
Sbjct: 541 MAVALLGEMRAAG---------------LTPNIISYSSAIDACVRGGQWKEGIALLEEMR 585
Query: 342 KSGLKPSAATY 352
SG+ P TY
Sbjct: 586 GSGVVPDVITY 596
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 191/490 (38%), Gaps = 88/490 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G G R+A +L+ + G D+ Y +++ KAG + AL + + M
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDV---ITYNVMISGYCKAGEINNALSVLDRM- 198
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ PD+ Y+++ +L G LK+ +++++RM Q+ PD++
Sbjct: 199 ---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY---------------PDVI 240
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y ++ A + ++R G P TY VLV +EG
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY------------NVLVNGICKEG 288
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEIT 434
+++EA+ + +M G + + +C+ GRW DA L+ + ++ + P +T
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR--KGFSPSVVT 346
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
F LI G + I I + M H C+PN + N +L + + +A E E
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE--- 403
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE-------------------YFE 534
R S G PD TY++ML A + E +
Sbjct: 404 RMVSRG----------CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 535 YVYKGMALSG----------------CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 578
V G+A +G + D ++ L+ SR GK F
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 579 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES-NEDRISRDK 637
G P+ + F +++ ++A+ + M E +T L E + ++++
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Query: 638 LEKLLNALCN 647
LE LLN LCN
Sbjct: 574 LE-LLNELCN 582
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 110/529 (20%), Positives = 212/529 (40%), Gaps = 61/529 (11%)
Query: 144 EWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDK 203
E P W ++ L+ RL T + W + + + G + LL LG
Sbjct: 265 EVFPNSIWLTQ------LISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRA 318
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM-LEDCNLY 261
+++ ++L + + D++ V + L+ L K R EAL +F M + N +
Sbjct: 319 REFKRMNTLLAEM----KEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGF 374
Query: 262 ---PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
PD+ Y+++ L +VG +E + L+ERMR +P P+ V YN
Sbjct: 375 LVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPR--------------CMPNTVTYN 420
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKIN 378
+++ + + +F Q+ K G+ P+ T L LV + G+IN
Sbjct: 421 CLIDGYCKASMIEAARELFDQMNKDGVPPNVVT------------LNTLVDGMCKHGRIN 468
Query: 379 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
AV M+ +G+ G A Y L CN + AM + +++ S P I + L
Sbjct: 469 GAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCS-PDAIVYYTL 527
Query: 439 IISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
I G +D + MK+ P+I + N ++ + R + +A E+ +E
Sbjct: 528 ISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEM----- 582
Query: 498 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 557
+ A +KPD TY++++ + + + K M G + L+
Sbjct: 583 --------ENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIH 634
Query: 558 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAMAYAPFH 616
G F + ++P +LI ++ + N + A++L++ M
Sbjct: 635 AYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVK 694
Query: 617 ITERQWTELFESNEDR--ISR--DKLEKLLNALCNCNAASSEITVSNLS 661
+ +F+ +++ +S+ + ++++ CN + + EI LS
Sbjct: 695 PNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLS 743
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 164/409 (40%), Gaps = 45/409 (11%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD ++++ L G + E V L++RM + +PD+V YN+++
Sbjct: 146 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC---------------QPDVVTYNSIV 190
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
N S + +++ + +K TY ++S R +G I+ A+
Sbjct: 191 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR------------DGCIDAAI 238
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
+ + ME +G+ + Y L LC G+W D L+++ + S R P ITF L+
Sbjct: 239 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS-REIVPNVITFNVLLDV 297
Query: 442 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
+ G + + +++ M PNI T N ++ Y + S+A + + R S
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS-- 355
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
PD T++S+++ + + V++ ++ G + ++ L+
Sbjct: 356 -----------PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 404
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 620
++GK L E F ++ G +P + + +L EKA+ + + + +
Sbjct: 405 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 464
Query: 621 QWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 669
+T + E K+E N C+ + V + + LC+
Sbjct: 465 MYTTIIEG---MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 510
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/416 (20%), Positives = 171/416 (41%), Gaps = 46/416 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+KGL +G +A+ ++D + + D+ Y ++ + ++G AL + M
Sbjct: 154 LIKGLFLEGKVSEAVVLVDRMVENGCQPDV---VTYNSIVNGICRSGDTSLALDLLRKM- 209
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ N+ D+ Y ++ +L + G + + L + M K ++ +V
Sbjct: 210 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG---------------IKSSVV 254
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN+++ + +W + K + + P+ T+ VL+ F +EG
Sbjct: 255 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF------------NVLLDVFVKEG 302
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
K+ EA + M RG+ Y L C R +A +++ + + S P +TF
Sbjct: 303 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS-PDIVTF 361
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
T LI +DD + +F+++ K N T + +++ + ++ A+ELF+E
Sbjct: 362 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV- 420
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
S G + PD TY +L+ + E +++ + S L +
Sbjct: 421 --SHG----------VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 468
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
++ + GK + F SL G P+ + +T M+ + + +A L+ M
Sbjct: 469 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 524
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/449 (20%), Positives = 190/449 (42%), Gaps = 47/449 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ LG++G W +A+ +W+ R S+ + +++ LG+ G+ AL +FN
Sbjct: 169 LLRELGNRGEWERALQGYEWMVQQVHLRSEWSKLA-SIMISTLGRLGKVEIALDVFN-RA 226
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ ++ AY ++ G+ G +E +K+ + M++ K P+L+
Sbjct: 227 QKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCK---------------PNLI 271
Query: 316 VYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR-AFWE 373
YN +++AC K +F +++K G++P T+ L+ V R WE
Sbjct: 272 TYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITF--------NSLIAVCSRGGLWE 323
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
+ + M++RG+ + L +C G+ + A ++ ++ ++ P +
Sbjct: 324 DSQ-----RVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRG-KNISPNVV 377
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T++ +I G ++ IS++ MK+ P+ + N ++ +Y++ F A ++
Sbjct: 378 TYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDM 437
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
R LK D TY+++++A +++ ++ M G + +
Sbjct: 438 ERVG-------------LKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTY 484
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 612
+ L+ S+AG + + F AG P + ++ ++ E AV L+ M
Sbjct: 485 SALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQ 544
Query: 613 APFHITERQWTELFESNEDRISRDKLEKL 641
A + L ++ DKLE +
Sbjct: 545 AGIQPNIVTYNSLIDAYGRYGQADKLEAV 573
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 159/437 (36%), Gaps = 110/437 (25%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + L+ + K G+ A I M N+ P++ Y ++ G++G +E + L
Sbjct: 342 FTFNTLIDAVCKGGQMELAASIMTTM-RGKNISPNVVTYSTMIDGYGKLGCFEEAISLYH 400
Query: 289 RMRQ---KPSK---------------------RIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
M++ +P + K+M R L+ D+V YNA+++A
Sbjct: 401 DMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVG----LKADVVTYNALIDAY 456
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAV 384
++K +F +++ GL P+ TY ++SY +
Sbjct: 457 GKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKA---------------------- 494
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
G QD V + K KP + ++ LI S
Sbjct: 495 -------------------------GMHQDVSNVFTEFKR-AGLKPDVVLYSSLIDSCCK 528
Query: 445 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
G ++D + + Q M + +PNI T N+++ Y R + +A +L E +AN
Sbjct: 529 CGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGR---YGQADKL--EAVKANMPNSVQK 583
Query: 504 SGDGA--------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
G+ + P + + ++ +L A + H+ + F + S L+
Sbjct: 584 IGERSMEVVRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAI-LNACSRCAS 642
Query: 556 LVEASRAGKCHLLEHA--FDSLLEAGEIPHPLFF---------TEMLIQAIVQSNYEKAV 604
L EAS LLE FD + I H L + L I + +Y
Sbjct: 643 LQEASV-----LLEQMRFFDGWVYG--IAHGLLMGLREQVWVEAQRLFDEISRMDYATGA 695
Query: 605 ALINAMAYAPFHITERQ 621
A NA+ +H +RQ
Sbjct: 696 AFYNALTDVLWHFGQRQ 712
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/418 (20%), Positives = 164/418 (39%), Gaps = 78/418 (18%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F YT +L+ + G+ A+R+F M P+I ++++ G G E++K+ E
Sbjct: 210 FTYTAMLSGFVRTGKDESAMRVFEEM-RTAGCKPNICTFNALIKMHGNRGKFAEMMKVFE 268
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
++ PD+V +N +L + V VFK++++ G P
Sbjct: 269 EIKI---------------CCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPE 313
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY + +Y RC G ++A+A + M G+ S Y + L
Sbjct: 314 RDTYNTLISAYSRC------------GSFDQAMAMYKRMLDTGITPDLSTYNAVLAALAR 361
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM---------- 458
G W+ + ++ +++ KP E+T L+ + +G I +++ + +
Sbjct: 362 GGLWEQSEKILAEMQD-GMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAV 420
Query: 459 --------KDHCE------------------PNIGTVNAMLKVYSRNDMFSKAKELFEET 492
C+ P++ T+NAM+ +Y R M +K E+
Sbjct: 421 LLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEIL--- 477
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
SG+T P TY+S++ + + +E E V K + G + D +
Sbjct: 478 NFMKESGFT----------PSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISY 527
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
++ R G+ H F + E+G IP + + + S +E+A+ ++ M
Sbjct: 528 NTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYM 585
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 153/369 (41%), Gaps = 45/369 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +R+A+ V ++++ + Y +L + GK G P + +
Sbjct: 39 LITACVSNGRYREAVMVFK---KMEEEGCKPTLITYNVILNVYGKMGMPWNKITGLFEGM 95
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ + PD Y+++ + L +E + E M+ PD V
Sbjct: 96 KNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMG---------------FVPDKV 140
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN +L+ S + K V +++ +G PS TY L+ A+ +G
Sbjct: 141 TYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTY------------NSLISAYARDG 188
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ EA+ M +RG+ Y + G+ + AM V E++++ KP TF
Sbjct: 189 LLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRT-AGCKPNICTF 247
Query: 436 TGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
LI + G + + +F+ +K C P+I T N +L V+ +N M S+ +F+E R
Sbjct: 248 NALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 307
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
G+ P+ TY++++ A + ++ +YK M +G D + +
Sbjct: 308 V---GFV----------PERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNA 354
Query: 555 LLVEASRAG 563
+L +R G
Sbjct: 355 VLAALARGG 363
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 128/295 (43%), Gaps = 30/295 (10%)
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+ N+H+ + EPD+ Y +++ ACV + +++ VFK++ + G KP+ TY + +
Sbjct: 21 LNNLHKDGF----EPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILN 76
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
Y + + W N+ M+ G++ Y L C +++A
Sbjct: 77 VYGKMGMP------W-----NKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAA 125
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVY 476
V E +KS+ P ++T+ L+ I + I + + M+ + C P+I T N+++ Y
Sbjct: 126 VFEDMKSMGFV-PDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAY 184
Query: 477 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
+R+ + +A EL + +K D +TY++ML + E V
Sbjct: 185 ARDGLLEEAMELKNQMVERG-------------IKLDVFTYTAMLSGFVRTGKDESAMRV 231
Query: 537 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
++ M +GC+ + L+ GK + F+ + +P + + +L
Sbjct: 232 FEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLL 286
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 147/355 (41%), Gaps = 54/355 (15%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ Y LL + GK+ R EA+ + M + C+ P I Y+S+ + GLL+E ++L
Sbjct: 139 KVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCS--PSIVTYNSLISAYARDGLLEEAMEL 196
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+M ++ K D+ Y A+L+ V + + + VF+++R +G K
Sbjct: 197 KNQMVERGIKL---------------DVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCK 241
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P+ C L++ GK E + ++ V + L
Sbjct: 242 PNI------------CTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVF 289
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 465
NG + V +++K + P T+ LI + G D +++++ M D P+
Sbjct: 290 GQNGMDSEVSGVFKEMKRVGFV-PERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPD 348
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T NA+L +R ++ +++++ E DG KP+E T+ S+L A A
Sbjct: 349 LSTYNAVLAALARGGLWEQSEKILAEMQ------------DGM-CKPNELTHCSLLHAYA 395
Query: 526 TAHQWEYFEYVYKGMALSG--CQLDQTKHAWLLVEASRAG-KCHLLEHAFDSLLE 577
+ + + +AL+ C HA LL KC LL A + LE
Sbjct: 396 NGKE------IGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLE 444
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 114/255 (44%), Gaps = 22/255 (8%)
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
+ V++ +EGK++ A + + N+ + G Y L +NGR+++A++V +K++
Sbjct: 1 VAVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKME 60
Query: 424 SLRHSKPLEITFTGLI-ISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDM 481
KP IT+ ++ + G + +F+ MK+ P+ T N ++ R +
Sbjct: 61 E-EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSL 119
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
+ +A +FE+ S G+ PD+ TY+++L+ + + + V + M
Sbjct: 120 YEEAAAVFEDM---KSMGFV----------PDKVTYNTLLDVYGKSRRIKEAIEVLREME 166
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQS 598
++GC + L+ +R G LLE A + ++E G +T ML +
Sbjct: 167 VNGCSPSIVTYNSLISAYARDG---LLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTG 223
Query: 599 NYEKAVALINAMAYA 613
E A+ + M A
Sbjct: 224 KDESAMRVFEEMRTA 238
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 87/436 (19%), Positives = 161/436 (36%), Gaps = 71/436 (16%)
Query: 163 DRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDK 222
D L E M KN M + G+ +L G G AM V + + K
Sbjct: 187 DGLLEEAMELKNQ-----MVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCK 241
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
++ + + L+ + G G+ E +++F ++ C PDI ++++ GQ G+ E
Sbjct: 242 PNICT---FNALIKMHGNRGKFAEMMKVFE-EIKICCCVPDIVTWNTLLAVFGQNGMDSE 297
Query: 283 LVKLIERMRQK---PSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLN 322
+ + + M++ P + N M+++ D + PDL YNAVL
Sbjct: 298 VSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLA 357
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR--------------------- 361
A W+ + +++ KP+ T+ + +Y
Sbjct: 358 ALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEP 417
Query: 362 --CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
LLK LV + + EA A ++++G S L + GR Q
Sbjct: 418 HAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLST---LNAMIAIYGRRQMVTKTN 474
Query: 420 EKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVY 476
E + ++ S P T+ L+ + + + + + +P+I + N ++ Y
Sbjct: 475 EILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAY 534
Query: 477 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
RN +A +F E + L PD TY++ + + A +E V
Sbjct: 535 CRNGRMKEASHIFSEMRESG-------------LIPDVITYNTFVASYAADSMFEEAIDV 581
Query: 537 YKGMALSGCQLDQTKH 552
M GC+ +Q +
Sbjct: 582 VCYMIKHGCKPNQNTY 597
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 75/192 (39%), Gaps = 28/192 (14%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
++AI G+ + I N M E P +A Y+S+ Q + + E +++
Sbjct: 460 MIAIYGRRQMVTKTNEILNFMKES-GFTPSLATYNSLMYMHSQS---ENFERSEEVLKEI 515
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+K IK PD++ YN V+ A + + K +F ++R+SGL P TY
Sbjct: 516 LAKGIK------------PDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITY- 562
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
V ++ + EA+ V M + G + Y + C R
Sbjct: 563 -----------NTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRD 611
Query: 414 DAMLVVEKIKSL 425
DA+ + + L
Sbjct: 612 DAIKFISSLHEL 623
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 187/482 (38%), Gaps = 63/482 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL D G +A D + + L + T + L G +A R+F + +
Sbjct: 291 LINGLCDSGRVNEA---FDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLF-VDM 346
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ P++ Y ++ L GLLK + L RM + D V P+ V
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR--------------DGVF-PNTV 391
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL----------- 364
YNA++N V + + K F V + ++G P+ TY ++ Y C+L
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY--CILGDPKKAMLVMN 449
Query: 365 --------------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+++ + + G A+ + M G Y EL C C
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTV 469
+ + A + ++ P E+T+T LI +D S+ +HMK C PN+ T
Sbjct: 510 KMESAFGLFNEMVD-DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 568
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
N ++ ++ + FS A+EL + + P+ TY++M++
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEG-------------IFPNVVTYTAMIDGLCKNGS 615
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
++ M GC + ++ L+ + GK E+ F L G IP + + +
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675
Query: 590 MLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES--NEDRISRDKLEKLLNALCN 647
M+ I+ E A + M A T + L + NE ++ +L L + + N
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPN 735
Query: 648 CN 649
C+
Sbjct: 736 CS 737
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/427 (19%), Positives = 147/427 (34%), Gaps = 66/427 (15%)
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS-------- 327
++GL LI R + + + + + ++P+L++YNAV+NA
Sbjct: 177 RMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAET 236
Query: 328 ---------------------------HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
H VF Q+ K G +P+ TY
Sbjct: 237 IMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY-------- 288
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
L+ + G++NEA +R M G++ TA LC+ G ++DA +
Sbjct: 289 ----STLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 479
+K+ + +P T+T LI G + I +F M +D PN T NA++ + N
Sbjct: 345 DMKN-KGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVEN 403
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
A + R S P+ TY+ M++ + V
Sbjct: 404 RRIKYAFVVLNLMGRNGCS-------------PNIVTYNEMIKGYCILGDPKKAMLVMNN 450
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
M G + + ++ +G D + + G P +TE++ S
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510
Query: 600 YEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL----CNCNAASSEI 655
E A L N M E +T L + D LL + C N + +
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570
Query: 656 TVSNLSR 662
+ L++
Sbjct: 571 LIHGLTK 577
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 96/474 (20%), Positives = 198/474 (41%), Gaps = 52/474 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ LG++G W +A+ +W+ R S+ + +++ LG+ G+ AL +FN
Sbjct: 168 LLRELGNRGEWERALQGYEWMVQQGHLRSEWSKLA-SIMISTLGRLGKVEIALDVFN-RA 225
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ ++ AY ++ G+ G +E +K+ + M++ K P+L+
Sbjct: 226 QKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCK---------------PNLI 270
Query: 316 VYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR-AFWE 373
YN +++AC K +F++++K G++P T+ L+ V R + WE
Sbjct: 271 TYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITF--------NSLIAVCSRGSLWE 322
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
+ + M++RG+ Y L +C G+ + A ++ ++ L++ P +
Sbjct: 323 DSQ-----RVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMR-LKNISPNVV 376
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T++ +I G ++ I ++ MK+ P+ + N ++ +Y++ F A ++
Sbjct: 377 TYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDM 436
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
R LK D TY+++++A +++ ++ M G + +
Sbjct: 437 ERVG-------------LKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTY 483
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 612
+ L+ S+AG F AG P + ++ ++ E AV L+ M
Sbjct: 484 SALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQ 543
Query: 613 A---PFHITERQWTELFESNE--DRISRDKLEKLLNALCNCNAASSEITVSNLS 661
A P +T + + N D + K +N S+EI L+
Sbjct: 544 AGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLT 597
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 162/433 (37%), Gaps = 101/433 (23%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ + K G+ A I + M N+ P++ Y ++ G++G +E + L
Sbjct: 341 FTYNTLIDAVCKGGQMELAASIMSSMRLK-NISPNVVTYSTMIDGYGKLGCFEEAIGLYH 399
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M++ + PD V YN +++ ++ K + + GLK
Sbjct: 400 DMKESG---------------VRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKAD 444
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY L+ A+ ++GK +A M+ G+V Y L
Sbjct: 445 VVTY------------NALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSK 492
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
G QDA + + K KP + ++ LI S G ++D + + Q M + +PNI
Sbjct: 493 AGMHQDATSIFVEFKR-AGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIV 551
Query: 468 TVNAMLKVYSRN---------------DMFSKAKELFEE------TTRANSSGYT----- 501
T N+++ Y RN ++F+K + E T++ N++ +T
Sbjct: 552 TYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLAA 611
Query: 502 ---FLSGDGAPLKPDEYTYSSML----------EASATAHQWEYFEYVYKGMALSGCQLD 548
F LKP+ T+S++L EAS Q +F+ G+A G +
Sbjct: 612 VSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEASVLLEQMRFFDSWVYGIA-HGLLMG 670
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+H W VEA R L I + +Y A N
Sbjct: 671 LREHVW--VEAQR-----------------------------LFDEIARMDYATGAAFYN 699
Query: 609 AMAYAPFHITERQ 621
A+ +H +RQ
Sbjct: 700 ALTDVLWHFGQRQ 712
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 187/482 (38%), Gaps = 63/482 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL D G +A D + + L + T + L G +A R+F + +
Sbjct: 291 LINGLCDSGRVNEA---FDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLF-VDM 346
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ P++ Y ++ L GLLK + L RM + D V P+ V
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR--------------DGVF-PNTV 391
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL----------- 364
YNA++N V + + K F V + ++G P+ TY ++ Y C+L
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY--CILGDPKKAMLVMN 449
Query: 365 --------------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+++ + + G A+ + M G Y EL C C
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTV 469
+ + A + ++ P E+T+T LI +D S+ +HMK C PN+ T
Sbjct: 510 KMESAFGLFNEMVD-DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 568
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
N ++ ++ + FS A+EL + + P+ TY++M++
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEG-------------IFPNVVTYTAMIDGLCKNGS 615
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
++ M GC + ++ L+ + GK E+ F L G IP + + +
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675
Query: 590 MLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES--NEDRISRDKLEKLLNALCN 647
M+ I+ E A + M A T + L + NE ++ +L L + + N
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPN 735
Query: 648 CN 649
C+
Sbjct: 736 CS 737
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 153/438 (34%), Gaps = 88/438 (20%)
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS-------- 327
++GL LI R + + + + + ++P+L++YNAV+NA
Sbjct: 177 RMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAET 236
Query: 328 ---------------------------HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
H VF Q+ K G +P+ TY
Sbjct: 237 IMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY-------- 288
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
L+ + G++NEA +R M G++ TA LC+ G ++DA +
Sbjct: 289 ----STLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 479
+K+ + +P T+T LI G + I +F M +D PN T NA++ + N
Sbjct: 345 DMKN-KGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVEN 403
Query: 480 DMFSKAKELFEETTRANSS-----------GYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
A + R S GY L G P K ++ML+ +A+
Sbjct: 404 RRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCIL---GDP-KKAMLVMNNMLQRGHSAN 459
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
Y + KG SG T A +++ R G C P +T
Sbjct: 460 LVTY-NTIIKGYCDSG----NTTSALRILDLMRDGGCK---------------PDEWSYT 499
Query: 589 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL--- 645
E++ S E A L N M E +T L + D LL +
Sbjct: 500 ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559
Query: 646 -CNCNAASSEITVSNLSR 662
C N + + + L++
Sbjct: 560 GCRPNVQTYNVLIHGLTK 577
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 169/398 (42%), Gaps = 60/398 (15%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G + M+V+D + K + + YT ++ GKAGR +ALR+F+LM +D P+
Sbjct: 370 GFLDEGMAVID---TMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLM-KDLGCAPN 425
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y+SV LG+ ++++K++ M+ P+ +N +L
Sbjct: 426 VYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCA---------------PNRATWNTMLAV 470
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV----------------- 366
C + V V ++++ G +P T+ + +Y RC +V
Sbjct: 471 CSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPC 530
Query: 367 ------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
L+ A G A + +++M +G + Y L C G + + VE
Sbjct: 531 VTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVK-GIEKVE 589
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRN 479
K H P I L++++ H+ F ++ + +P++ +N+ML +++RN
Sbjct: 590 KEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARN 649
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
MFSKA+E+ F+ G L+P+ +TY+ +++ + E V KG
Sbjct: 650 KMFSKAREMLH-----------FIHECG--LQPNLFTYNCLMDLYVREGECWKAEEVLKG 696
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+ SG + D + ++ R G L++ A L E
Sbjct: 697 IQNSGPEPDVVSYNTVIKGFCRKG---LMQEAIGVLSE 731
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 106/506 (20%), Positives = 207/506 (40%), Gaps = 56/506 (11%)
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWV---YGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
E LLK L G+W +A+ + +W +G L ++ V ++ ILG+ +
Sbjct: 140 EADFPSLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQVV-ELMVRILGRESQHSI 198
Query: 247 ALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNM- 301
A ++F+L+ +E +L D+ AY ++ + + G K + L +M++ P+ N+
Sbjct: 199 ASKLFDLIPVEKYSL--DVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVM 256
Query: 302 ------HRKNWDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
++WD + LE D + V++AC +L+ +G
Sbjct: 257 LDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNG 316
Query: 345 LKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
KP TY +++ F + G EA++ ++ ME + Y ELA
Sbjct: 317 YKPGTVTY------------NSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAA 364
Query: 405 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCE 463
G + M V++ + S + P IT+T +I + G DD + +F MKD C
Sbjct: 365 TYVRAGFLDEGMAVIDTMTS-KGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCA 423
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
PN+ T N++L + + S+ +++ + +G P+ T+++ML
Sbjct: 424 PNVYTYNSVLAMLGKK---SRTEDVIKVLCEMKLNG----------CAPNRATWNTMLAV 470
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
+ + Y V + M G + D+ L+ +R G + ++++G P
Sbjct: 471 CSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPC 530
Query: 584 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLN 643
+ +L + +++ A ++I M F E ++ L + +EK+
Sbjct: 531 VTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEK 590
Query: 644 ALCNCNAASSEITVSNLSRALHALCR 669
+ + + S I + L H CR
Sbjct: 591 EIYDGHVFPSWILLRTLVLTNHK-CR 615
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 68/175 (38%), Gaps = 33/175 (18%)
Query: 254 MLEDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL 310
+ +C L P++ Y+ + V G+ +E++K I+ N P
Sbjct: 661 FIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQ----------------NSGP-- 702
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
EPD+V YN V+ + V ++ G++P+ TY + Y L
Sbjct: 703 EPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMEL------ 756
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+EA +R M + + Y L C G++++AM V KIK L
Sbjct: 757 ------FDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFVSKIKEL 805
>gi|298712182|emb|CBJ33054.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 903
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/468 (20%), Positives = 179/468 (38%), Gaps = 96/468 (20%)
Query: 202 DKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNL 260
D G W +A LD ++ +++ ++ V Y ++A GKAG+ +A+ IF M E +
Sbjct: 312 DCGEWEEA---LDLLHFMREVGGVEPDVVTYNIVVAACGKAGQGEKAIEIFREMSE-VGI 367
Query: 261 YPDIAAYHSVAVTLGQVGLLKELVKL---IERMRQKPSKRIKN------MHRKNWDPVLE 311
PD+ ++ + G GL +E + + +ER +P+ N + W+ L+
Sbjct: 368 KPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNIITHNAVMSACIAAGQWEEALD 427
Query: 312 ---------------------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
D YN L+AC QW + + + K G
Sbjct: 428 FFTEVVDGSGAANGGGGGGPPPDPVEVADACSYNTALSACEVGEQWGRALSLLRDMPKRG 487
Query: 345 LKPSAATYGLAMESYRRC--------LLKVL---------------VRAFWEEGKINEAV 381
+KP +Y + + +C LL+ + + A G+ ++AV
Sbjct: 488 VKPVVISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSGRPDDAV 547
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
+R M + GV A Y L + GRW+ A+ ++ +++ S P I +T I +
Sbjct: 548 RLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVS-PTVICYTAAIRA 606
Query: 442 SMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
+ G D+ + + + M PN+ + +A + ++ + + L E
Sbjct: 607 CGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALLNEMPALG---- 662
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
L P+E+ Y++ + QWE ++ M SG Q +
Sbjct: 663 ---------LTPNEFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYT------- 706
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPL-FFTEMLIQAIVQSNYEKAVALI 607
A +L GE+ L +EM +A ++ N + A+I
Sbjct: 707 ---------SAVSALAHCGEVDLALELLSEMKEEAGIEPNEQTYAAVI 745
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 171/426 (40%), Gaps = 60/426 (14%)
Query: 200 LGDKGSWRQAMSVLD----WVYGLKDKRDLKSRFV------YTKLLAILGKAGRPHEALR 249
+ D S+ A+S + W L RD+ R V Y +++ GK G +AL
Sbjct: 454 VADACSYNTALSACEVGEQWGRALSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALA 513
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
+ M E L PD+ ++S L G + V+L MR+ P +
Sbjct: 514 LLREMPER-GLMPDVITFNSAIAALSNSGRPDDAVRL---MREMPRAGVA---------- 559
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
D + Y++ L + +W+ + ++++ +G+ P+ Y A +R
Sbjct: 560 --ADAITYSSALTGLAHAGRWEQALSLLREMQGAGVSPTVICYTAA------------IR 605
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
A E GK +EA+ +R M GV Y +GRW+ + ++ ++ +L +
Sbjct: 606 ACGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALLNEMPALGLT- 664
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P E +T I GG + ++ F+ M +P + + + + A EL
Sbjct: 665 PNEFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTSAVSALAHCGEVDLALEL 724
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
E + A ++P+E TY++++ A Q V + MA +G
Sbjct: 725 LSEMK------------EEAGIEPNEQTYAAVILACGNGGQGHLVAQVQRDMASAGITPR 772
Query: 549 QTKHAWLLVEASRA-GKCHLLEHAFDSL--LEAGEIPHPLFFTEMLIQAIVQSN-YEKAV 604
T + + A RA G+C A L +EA +P + I A +S +++A+
Sbjct: 773 LTGY----LSAIRASGECGNWSEATSLLGEMEAAGVPPTVSCYNAAITACGKSGKWQEAL 828
Query: 605 ALINAM 610
L++ M
Sbjct: 829 DLLDEM 834
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 136/342 (39%), Gaps = 78/342 (22%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S FVY+K ++ + K R EAL I M E P+ ++ G+ G ++E + L
Sbjct: 123 STFVYSKCISRMAKCFRWGEALDILARMAE-LGAMPNSYCVNAALDACGKAGRVQEALGL 181
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-GL 345
+ R +E D+V YN + ACV W+ + +++ G+
Sbjct: 182 MRDARASG---------------IELDVVSYNCAIPACVTGGDWELALSMIREMEAEYGI 226
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY------ 399
KP+ TY A++ RC GK +EA + + M+ GV SVY
Sbjct: 227 KPNHITYQAAIKVCGRC------------GKADEAASLLIEMKDGGVPLKTSVYSAVFNA 274
Query: 400 ----------------------------YELACCLCNN-GRWQDAMLVVEKIKSLRHSKP 430
Y LA C C + G W++A+ ++ ++ + +P
Sbjct: 275 FRRVDHWQAAASTLREIHDWPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEP 334
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+T+ ++ + G + I IF+ M + +P++ + + + +A +F
Sbjct: 335 DVVTYNIVVAACGKAGQGEKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIF 394
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
E RA ++P+ T+++++ A A QWE
Sbjct: 395 REMERAG-------------VRPNIITHNAVMSACIAAGQWE 423
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 124/317 (39%), Gaps = 32/317 (10%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
+ +R M ++G+ L GL G W QA+S+L + G + YT +
Sbjct: 548 RLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVSPTV---ICYTAAI 604
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
G+AG+ EAL + M + P++ +Y + G+ G ++ + L+ M P+
Sbjct: 605 RACGEAGKGDEALLLLREM-PTAGVTPNLFSYSATISACGKDGRWEQGLALLNEM---PA 660
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
L P+ Y A + C QW+ F+ + SG++P+ Y A
Sbjct: 661 LG------------LTPNEFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTSA 708
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+ + C G+++ A+ + M++ + Y C NG
Sbjct: 709 VSALAHC------------GEVDLALELLSEMKEEAGIEPNEQTYAAVILACGNGGQGHL 756
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLK 474
+ V++ + P + I +S + G+ + S+ M+ P + NA +
Sbjct: 757 VAQVQRDMASAGITPRLTGYLSAIRASGECGNWSEATSLLGEMEAAGVPPTVSCYNAAIT 816
Query: 475 VYSRNDMFSKAKELFEE 491
++ + +A +L +E
Sbjct: 817 ACGKSGKWQEALDLLDE 833
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 92/226 (40%), Gaps = 30/226 (13%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
+ G G W Q +++L+ + L + F YT + G G+ A+ F M+
Sbjct: 639 ISACGKDGRWEQGLALLNEMPALGLTPN---EFCYTAAITGCGIGGQWERAVATFRSMIA 695
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
+ P + Y S L G + ++L+ M+++ +EP+
Sbjct: 696 S-GIQPTVVGYTSAVSALAHCGEVDLALELLSEMKEEAG--------------IEPNEQT 740
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGK 376
Y AV+ AC Q V V + + +G+ P Y A +RA E G
Sbjct: 741 YAAVILACGNGGQGHLVAQVQRDMASAGITPRLTGYLSA------------IRASGECGN 788
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
+EA + + ME GV T S Y +G+WQ+A+ +++++
Sbjct: 789 WSEATSLLGEMEAAGVPPTVSCYNAAITACGKSGKWQEALDLLDEM 834
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 90/495 (18%), Positives = 167/495 (33%), Gaps = 132/495 (26%)
Query: 204 GSWRQAMSV---LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALR----------- 249
G W A+S+ ++ YG+K + Y + + G+ G+ EA
Sbjct: 208 GDWELALSMIREMEAEYGIK-----PNHITYQAAIKVCGRCGKADEAASLLIEMKDGGVP 262
Query: 250 --------IFNLM---------------LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+FN + D + P++ Y+ T G +E + L
Sbjct: 263 LKTSVYSAVFNAFRRVDHWQAAASTLREIHDWPVKPNVFNYNLAICTCTDCGEWEEALDL 322
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ MR+ +EPD+V YN V+ AC + Q + +F+++ + G+K
Sbjct: 323 LHFMREVGG--------------VEPDVVTYNIVVAACGKAGQGEKAIEIFREMSEVGIK 368
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P ++ A+ + C L EA++ R ME+ GV + +
Sbjct: 369 PDVISFTTAISACGSCGLS------------EEALSIFREMERAGVRPNIITHNAVMSAC 416
Query: 407 CNNGRWQDAM-----------------------LVVEKIKSLRHSKPLE----------- 432
G+W++A+ VE + ++ L
Sbjct: 417 IAAGQWEEALDFFTEVVDGSGAANGGGGGGPPPDPVEVADACSYNTALSACEVGEQWGRA 476
Query: 433 ----------------ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 475
I++ +I + G D +++ + M + P++ T N+ +
Sbjct: 477 LSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAA 536
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
S + A L E RA + D TYSS L A A +WE
Sbjct: 537 LSNSGRPDDAVRLMREMPRAG-------------VAADAITYSSALTGLAHAGRWEQALS 583
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
+ + M +G + + AGK + AG P+ ++ +
Sbjct: 584 LLREMQGAGVSPTVICYTAAIRACGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACG 643
Query: 596 VQSNYEKAVALINAM 610
+E+ +AL+N M
Sbjct: 644 KDGRWEQGLALLNEM 658
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 92/451 (20%), Positives = 159/451 (35%), Gaps = 77/451 (17%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRI--------------- 250
W +A+ +L + L + + + L GKAGR EAL +
Sbjct: 140 WGEALDILARMAELGA---MPNSYCVNAALDACGKAGRVQEALGLMRDARASGIELDVVS 196
Query: 251 FNLMLEDC--------------------NLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+N + C + P+ Y + G+ G E L+ M
Sbjct: 197 YNCAIPACVTGGDWELALSMIREMEAEYGIKPNHITYQAAIKVCGRCGKADEAASLLIEM 256
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ D + VY+AV NA W+ +++ +KP+
Sbjct: 257 K---------------DGGVPLKTSVYSAVFNAFRRVDHWQAAASTLREIHDWPVKPNVF 301
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN- 409
Y LA+ + C G+ EA+ + M + G V V Y + C
Sbjct: 302 NYNLAICTCTDC------------GEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKA 349
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
G+ + A+ + ++ + KP I+FT I + G ++ +SIF+ M + PNI T
Sbjct: 350 GQGEKAIEIFREMSEV-GIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNIIT 408
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK---PDEYTYSSMLEASA 525
NA++ + +A + F E + + G P D +Y++ L A
Sbjct: 409 HNAVMSACIAAGQWEEALDFFTEVVDGSGAANGGGGGGPPPDPVEVADACSYNTALSACE 468
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA---GEIP 582
QW + + M G + + ++ S GKC + A L E G +P
Sbjct: 469 VGEQWGRALSLLRDMPKRGVKPVVISYNTVI---SACGKCGEGDQALALLREMPERGLMP 525
Query: 583 HPLFFTEMLIQAIVQSNYEKAVALINAMAYA 613
+ F + + AV L+ M A
Sbjct: 526 DVITFNSAIAALSNSGRPDDAVRLMREMPRA 556
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 125/326 (38%), Gaps = 46/326 (14%)
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
P VY+ ++ +W + ++ + G P++ A++
Sbjct: 118 PAAAVSTFVYSKCISRMAKCFRWGEALDILARMAELGAMPNSYCVNAALD---------- 167
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC-NNGRWQDAMLVVEKIKSLR 426
A + G++ EA+ +R+ G+ V Y A C G W+ A+ ++ ++++
Sbjct: 168 --ACGKAGRVQEALGLMRDARASGIE-LDVVSYNCAIPACVTGGDWELALSMIREMEAEY 224
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV-NAMLKVYSRNDMFSKA 485
KP IT+ I G D+ S+ MKD P +V +A+ + R D + A
Sbjct: 225 GIKPNHITYQAAIKVCGRCGKADEAASLLIEMKDGGVPLKTSVYSAVFNAFRRVDHWQAA 284
Query: 486 ----KELFEETTRANSSGYT--------------------FLSGDGAPLKPDEYTYSSML 521
+E+ + + N Y F+ G ++PD TY+ ++
Sbjct: 285 ASTLREIHDWPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGG-VEPDVVTYNIVV 343
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEA 578
A A Q E +++ M+ G + D + S G C L E A F + A
Sbjct: 344 AACGKAGQGEKAIEIFREMSEVGIKPDVISFTTAI---SACGSCGLSEEALSIFREMERA 400
Query: 579 GEIPHPLFFTEMLIQAIVQSNYEKAV 604
G P+ + ++ I +E+A+
Sbjct: 401 GVRPNIITHNAVMSACIAAGQWEEAL 426
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 165/409 (40%), Gaps = 45/409 (11%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD ++++ L G + + V L++RM + +PD+V YN+++
Sbjct: 156 PDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC---------------QPDMVTYNSIV 200
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
N S F + +++ + +K TY ++S R +G I+ A+
Sbjct: 201 NGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCR------------DGCIDAAI 248
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
+ + ME +G+ + Y L LC G+W D L+++ + S R P ITF L+
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS-REIVPNVITFNVLLDV 307
Query: 442 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
+ G + + +++ M PNI T N ++ Y + S+A + + R S
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS-- 365
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
PD T++S+++ + + V++ ++ G + ++ L+
Sbjct: 366 -----------PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 620
++GK L E F ++ G +P + + +L EKA+ + + + +
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 621 QWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 669
+T + E K+E N C+ + V + + LC+
Sbjct: 475 MYTTIIEG---MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 168/404 (41%), Gaps = 49/404 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA---VTLGQVGLLKELVK 285
YT L+A +A + EA+++ M E P++ Y+ + L VG +++VK
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRER-GCPPNLVTYNVLVDALCKLSMVGAAQDVVK 116
Query: 286 LIERMRQKPSKRIKN------MHRKNWDPV-----------LEPDLVVYNAVLNACVPSH 328
+ P+ N R N D + P++V Y+A+++ S
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
++ V ++++ SG+ P A TY L+ + KI EA +R M
Sbjct: 177 KFLEAKEVLEEMKASGVTPDAFTY------------SALIHGLCKADKIEEAEQMLRRMA 224
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
G VY + C +G+ +A +++++ R S P +T+ +I G I
Sbjct: 225 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKS-PDVVTYNTVIDGLCKLGKI 283
Query: 449 DDCISIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
+ I M++ + P++ T + ++ ++DM +A++L + +A +
Sbjct: 284 AEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCN-------- 335
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
PD TY+++++ + E EY+ +GM +GC + + L+ +A K
Sbjct: 336 -----PDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVD 390
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
E + + AG P+ + + M+ V ++A L+ M
Sbjct: 391 EAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 434
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 99/241 (41%), Gaps = 28/241 (11%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
++ +R Y ++ L K G+ EA I + M E ++ PD+ Y +V L +
Sbjct: 258 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSD 317
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+L E KL++RM + PD+V Y +++ + + ++ +
Sbjct: 318 MLVEAQKLLDRMCKAGCN---------------PDVVTYTTIIDGLCKCGRLEEAEYLLQ 362
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
++++G P+ TY L+ + K++EA + M G
Sbjct: 363 GMKRAGCAPNVVTY------------TTLISGLCKARKVDEAERVMEEMRNAGCPPNLVT 410
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLR-HSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y + LC +GR ++A +V+++K R P T+ ++ + M + + + +
Sbjct: 411 YNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQ 470
Query: 458 M 458
M
Sbjct: 471 M 471
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 174/413 (42%), Gaps = 44/413 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL-KELVKLIER 289
YT L++ +AGR +A+ +F M+ D + P + Y+ V ++ + KE+V L++
Sbjct: 187 YTALVSAFSRAGRFRDAVAVFQRMV-DGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDS 245
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M++ +E D YN +++ C + VF +++ +G +P
Sbjct: 246 MKEDG---------------IERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDK 290
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
T+ ++ Y + K EA+ ++ ME G + Y L +
Sbjct: 291 VTFNSLLDVYGKAR------------KHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKD 338
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
G ++A+ + ++++ R KP +T+T LI G ID ++ + M ++ C PN+ T
Sbjct: 339 GLLEEALELKQEME-FRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCT 397
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
NA++K++ F++ +F++ S+GY PD T++++L
Sbjct: 398 YNALIKLHGVRGKFTEMMAVFDDL---RSAGYV----------PDVVTWNTLLSVFGQNG 444
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
V+K M +G ++ + L+ SR G + ++EAG P +
Sbjct: 445 LDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYN 504
Query: 589 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKL 641
+L +E+A L M E ++ L + + DK++ L
Sbjct: 505 AVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTL 557
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 125/281 (44%), Gaps = 26/281 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD Y A+++A + +++ VF+++ G++P+ TY + +Y + +
Sbjct: 182 PDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVP------ 235
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
W+ E VA V +M++ G+ Y L C G ++A V +++K+ +P
Sbjct: 236 WK-----EVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGF-EPD 289
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
++TF L+ ++ I + + M++ C P++ T N+++ Y ++ + +A EL +
Sbjct: 290 KVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQ 349
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E + +KPD TY++++ + + Y M +GC +
Sbjct: 350 EM-------------EFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLC 396
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ GK + FD L AG +P + + +L
Sbjct: 397 TYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLL 437
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 156/387 (40%), Gaps = 92/387 (23%)
Query: 223 RDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLL 280
R +K V YT L++ L + G+ AL ++ M+ + C+ P++ Y+++ G G
Sbjct: 354 RGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCS--PNLCTYNALIKLHGVRGKF 411
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E++ + + +R PD+V +N +L+ + V VFK++
Sbjct: 412 TEMMAVFDDLRSAG---------------YVPDVVTWNTLLSVFGQNGLDSEVSGVFKEM 456
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
+K+G P TY + SY RC G ++A+ + M + G+ S Y
Sbjct: 457 KKAGYIPERDTYVSLISSYSRC------------GLFDQAMEIYKRMIEAGIYPDISTYN 504
Query: 401 ELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI----- 454
+ L GRW+ A L E + R KP E++++ L+ + + +D ++
Sbjct: 505 AVLSALARGGRWEQAEKLFAEMVD--RDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIY 562
Query: 455 ------------------------------FQHM-KDHCEPNIGTVNAMLKVYSRNDMFS 483
FQ + + C +I +NAM+ +Y +N M
Sbjct: 563 AERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVK 622
Query: 484 KAKE----LFEETTRANSSGYTFLS------GD------------GAPLKPDEYTYSSML 521
K +E + E + +++ Y L GD + ++PD Y+Y++++
Sbjct: 623 KVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVI 682
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLD 548
A Q + ++ M SG + D
Sbjct: 683 YAYGRKGQMKEASRLFSEMKCSGVKPD 709
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/395 (19%), Positives = 147/395 (37%), Gaps = 61/395 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K G +G + + M+V D L+ + + LL++ G+ G E +F M
Sbjct: 401 LIKLHGVRGKFTEMMAVFD---DLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEM- 456
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ Y S+ + + GL + +++ +RM + + PD+
Sbjct: 457 KKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRM---------------IEAGIYPDIS 501
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC------------- 362
YNAVL+A +W+ +F ++ KP +Y + +Y
Sbjct: 502 TYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDI 561
Query: 363 ----------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
L+K LV + + E A + + +R +V + N
Sbjct: 562 YAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMV 621
Query: 413 QDAMLVVEKI--KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
+ V+ + S+ HS T+ L+ G + C SI +K P+ +
Sbjct: 622 KKVEEVLSLMMENSINHSA---ATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSY 678
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
N ++ Y R +A LF E SG +KPD TY+ +++
Sbjct: 679 NTVIYAYGRKGQMKEASRLFSEM---KCSG----------VKPDIVTYNIFIKSYVANIM 725
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+E + + + GC+ ++ +L SR G+
Sbjct: 726 FEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGR 760
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 133/331 (40%), Gaps = 40/331 (12%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M ++G + + L+ G + QAM + + D+ + Y +L+ L +
Sbjct: 456 MKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDIST---YNAVLSALAR 512
Query: 241 AGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR-- 297
GR +A ++F M++ DC PD +Y S+ L ++ L E + + +R
Sbjct: 513 GGRWEQAEKLFAEMVDRDCK--PDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHN 570
Query: 298 --IKNM----HRKNWDPVLEP------------DLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+K + ++ N P E D+ V NA+++ + K V V
Sbjct: 571 WLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSL 630
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ ++ + SAATY M Y R G + + + ++ G+ Y
Sbjct: 631 MMENSINHSAATYNSLMHMYSRL------------GDCEKCESILTEIKSSGMRPDRYSY 678
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
+ G+ ++A + ++K KP +T+ I S + ++ I + +++
Sbjct: 679 NTVIYAYGRKGQMKEASRLFSEMKC-SGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLV 737
Query: 460 DH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
C PN T N++L+ YSR+ +AK
Sbjct: 738 TQGCRPNERTFNSILQGYSRHGRMVEAKSFL 768
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 103/482 (21%), Positives = 187/482 (38%), Gaps = 63/482 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL D G +A D + + L + T + L G +A R+F + +
Sbjct: 291 LINGLCDSGRVNEA---FDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLF-VDM 346
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ P++ Y ++ L G+LK + L RM + D V P+ V
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSR--------------DGVF-PNTV 391
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL----------- 364
YNA++N V + + K F V + ++G P+ TY ++ Y C+L
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGY--CILGDPKKAMLVMN 449
Query: 365 --------------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+++ + + G A+ + M G Y EL C C
Sbjct: 450 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 509
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTV 469
+ + A + ++ P E+T+T LI +D S+ +HMK C PN+ T
Sbjct: 510 KMESAFGLFNEMVD-DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 568
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
N ++ ++ + FS A+EL + + P+ TY++M++
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEG-------------IFPNVVTYTAMIDGLCKNGS 615
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
++ M GC + ++ L+ + GK E+ F L G IP + + +
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675
Query: 590 MLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES--NEDRISRDKLEKLLNALCN 647
M+ I+ E A + M A T + L + NE ++ +L L + + N
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPN 735
Query: 648 CN 649
C+
Sbjct: 736 CS 737
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/427 (19%), Positives = 147/427 (34%), Gaps = 66/427 (15%)
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS-------- 327
++GL LI R + + + + + ++P+L++YNAV+NA
Sbjct: 177 RMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAET 236
Query: 328 ---------------------------HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
H VF Q+ K G +P+ TY
Sbjct: 237 IMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY-------- 288
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
L+ + G++NEA +R M G++ TA LC+ G ++DA +
Sbjct: 289 ----STLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 479
+K+ + +P T+T LI G + I +F M +D PN T NA++ + N
Sbjct: 345 DMKN-KGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVEN 403
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
A + R S P+ TY+ M++ + V
Sbjct: 404 RRIKYAFVVLNLMGRNGCS-------------PNIVTYNEMIKGYCILGDPKKAMLVMNN 450
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
M G + + ++ +G D + + G P +TE++ S
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510
Query: 600 YEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL----CNCNAASSEI 655
E A L N M E +T L + D LL + C N + +
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570
Query: 656 TVSNLSR 662
+ L++
Sbjct: 571 LIHGLTK 577
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 168/402 (41%), Gaps = 49/402 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLI 287
YT L+A +A + EA+++ M E P++ Y+ + L VG +++VK +
Sbjct: 182 YTALIAAFARAKKLEEAMKLLEEMRER-GCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 240
Query: 288 ERMRQKPSKRIKN------MHRKNWDPV-----------LEPDLVVYNAVLNACVPSHQW 330
P+ N R N D + P++V Y+A+++ S ++
Sbjct: 241 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 300
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
V ++++ G+ P A TY L+ + KI EA +R M
Sbjct: 301 LEAKEVLEEMKTRGVTPDAFTY------------SALIHGLCKADKIEEAEQMLRRMAGS 348
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
G VY + C +G+ +A +++++ R S P +T+ +I G I +
Sbjct: 349 GCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKS-PDVVTYNTVIDGLCKLGKIAE 407
Query: 451 CISIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
I + M++ + P++ T + ++ ++DM +A++L + +A +
Sbjct: 408 AQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCN---------- 457
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
PD TY+++++ + E EY+ +GM +GC + + L+ +A K
Sbjct: 458 ---PDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEA 514
Query: 569 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
E + + AG P+ + + M+ V ++A L+ M
Sbjct: 515 ERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 556
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 139/345 (40%), Gaps = 50/345 (14%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
+ F + LL +L + + EA +F + +L C PD+ +Y+ V G L ++
Sbjct: 76 TAFSWNSLLQVLVRCKKHREAGDLFRSELLASCE--PDVCSYNIVISGFCNAGDLHAALE 133
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
L+E M+ PD + ++ A + G LR G
Sbjct: 134 LLEEMKSAG---------------FAPDAFTHTPIITAMANAGDLDG---AMDHLRSMGC 175
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
P+ TY L+ AF K+ EA+ + M +RG Y L
Sbjct: 176 DPNVVTY------------TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDA 223
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 464
LC A VV+K+ + P +TF L+ G++DD + M P
Sbjct: 224 LCKLSMVGAAQDVVKKMIEGGFA-PNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRP 282
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
N+ T +A++ ++ F +AKE+ EE + G T PD +TYS+++
Sbjct: 283 NVVTYSALIDGLCKSQKFLEAKEVLEEM---KTRGVT----------PDAFTYSALIHGL 329
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
A + E E + + MA SGC D ++ ++ ++GK LLE
Sbjct: 330 CKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK--LLE 372
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 99/242 (40%), Gaps = 28/242 (11%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
++ +R Y ++ L K G+ EA I M E ++ PD+ Y +V L +
Sbjct: 380 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSD 439
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+L E KL++RM + PD+V Y +++ + + ++ +
Sbjct: 440 MLVEAQKLLDRMCKAGCN---------------PDVVTYTTIIDGLCKCGRLEEAEYLLQ 484
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
++++G P+ TY L+ + K++EA + M G
Sbjct: 485 GMKRAGCAPNVVTY------------TTLISGLCKARKVDEAERVMEEMRNAGCPPNLVT 532
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLR-HSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y + LC +GR ++A +V+++K R P T+ ++ + M + + + +
Sbjct: 533 YNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQ 592
Query: 458 MK 459
MK
Sbjct: 593 MK 594
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 164/409 (40%), Gaps = 45/409 (11%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD ++++ L G + E V L++RM + +PD+V YN+++
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC---------------QPDVVTYNSIV 200
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
N S + +++ + +K TY ++S R +G I+ A+
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR------------DGCIDAAI 248
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
+ + ME +G+ + Y L LC G+W D L+++ + S R P ITF L+
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS-REIVPNVITFNVLLDV 307
Query: 442 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
+ G + + +++ M PNI T N ++ Y + S+A + + R S
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS-- 365
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
PD T++S+++ + + V++ ++ G + ++ L+
Sbjct: 366 -----------PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 620
++GK L E F ++ G +P + + +L EKA+ + + + +
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 621 QWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 669
+T + E K+E N C+ + V + + LC+
Sbjct: 475 MYTTIIEG---MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/510 (20%), Positives = 204/510 (40%), Gaps = 60/510 (11%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+ RL T + W M + G + LL GL +G++ + +++ + +
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEM- 334
Query: 221 DKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLE-------DCNLYPDIAAYHSVAV 272
D++ V + L+ + K R +AL + M ++ PD+ Y+++
Sbjct: 335 ---DIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLID 391
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
L +VG +E + L+ERMR + PD + YN +++ + + +
Sbjct: 392 GLCKVGRQQEGLGLMERMRSQKG--------------CAPDTITYNCLIDGFCKAGEIEK 437
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+F ++ K G+ P+ T + LV G+++ AV ++RG+
Sbjct: 438 GKELFDEMNKEGVAPNVVT------------VNTLVGGMCRTGRVSSAVNFFVEAQRRGM 485
Query: 393 VGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
G A Y L CN ++ AM L E +KS P I + LI G + D
Sbjct: 486 KGDAVTYTALINAFCNVNNFEKAMELFNEMLKS--GCSPDAIVYYTLISGFSQAGRMADA 543
Query: 452 ISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 510
+ +K P+ N ++ + R + F + E+ +E + A L
Sbjct: 544 SFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEM-------------EEAGL 590
Query: 511 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 570
KPD TY++++ ++ ++ + V + M +G + ++ G +
Sbjct: 591 KPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAME 650
Query: 571 AFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK-AVALINAMAYAPFHITERQWTELFESN 629
F + A ++P +LI ++ ++N K AV+L+ M + +F+
Sbjct: 651 IFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGL 710
Query: 630 EDRISRDK----LEKLLNALCNCNAASSEI 655
D +K +++++ CN + + EI
Sbjct: 711 RDEKDLEKVFEFMDRMIEHACNPDYITMEI 740
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 164/409 (40%), Gaps = 45/409 (11%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD ++++ L G + E V L++RM + +PD+V YN+++
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC---------------QPDVVTYNSIV 200
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
N S + +++ + +K TY ++S R +G I+ A+
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR------------DGCIDAAI 248
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
+ + ME +G+ + Y L LC G+W D L+++ + S R P ITF L+
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS-REIVPNVITFNVLLDV 307
Query: 442 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
+ G + + +++ M PNI T N ++ Y + S+A + + R S
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS-- 365
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
PD T++S+++ + + V++ ++ G + ++ L+
Sbjct: 366 -----------PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 620
++GK L E F ++ G +P + + +L EKA+ + + + +
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 621 QWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 669
+T + E K+E N C+ + V + + LC+
Sbjct: 475 MYTTIIEG---MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/472 (21%), Positives = 187/472 (39%), Gaps = 77/472 (16%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M+ G E + L G WR+A+S+L+ + + +YTK+++ L +
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLE------KEEFVPDTVLYTKMISGLCE 54
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSV---AVTLGQVGLLKELVKLIERMRQKPSKR 297
A EA+ M L P++ Y + + ++G K ++ ++ PS R
Sbjct: 55 ASLFEEAMDFLTRMRASSCL-PNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPR 113
Query: 298 IKN-----------------MHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQ 339
I N + +K +P VVYN ++ C K V + ++
Sbjct: 114 IFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEK 173
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
L+ + + ++ RCL + GK +A +R M +G + S Y
Sbjct: 174 AYGEMLEAGVVLNKVNISNFSRCLCGI--------GKFEKAYNVIREMMSKGFIPDTSTY 225
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 458
++ LCN + + A + +++K P +T LI S G I+ + F M
Sbjct: 226 SKVIGYLCNASKVEKAFQLFQEMKR-NGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEME 284
Query: 459 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE----ETTRANSSGYT------------- 501
+D C PN+ T A++ Y ++ SKA E++E + N YT
Sbjct: 285 RDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIE 344
Query: 502 ----------------------FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
F DGA +P+ +TY ++++ A+Q + + K
Sbjct: 345 KASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKS 404
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
M++ GC+ + + L+ +AGK + F ++LE G P+ ++ ++
Sbjct: 405 MSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLI 456
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 29/270 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV---AVTLGQVGLLKELVKLI 287
YT L+ L KAG+ +A +I+ +M ++ PD+ + V A V LV +
Sbjct: 330 YTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGL 389
Query: 288 ERMRQKPSKR--IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ Q R +K+M + EP+ VVY+A+++ C + + VF + + G
Sbjct: 390 CKAYQVKEARDLLKSMSVEGC----EPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGY 445
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
P+ TY L+ +++ +++ A+ + M + +Y E+
Sbjct: 446 DPNVYTY------------SSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDG 493
Query: 406 LCNNGRWQDA---MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH- 461
LC G+ +A M+++E+ + P +T+T +I G ++ C+ + Q M
Sbjct: 494 LCKVGKTDEAYKLMVMMEE----KGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKG 549
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
C PN T ++ + +A +L EE
Sbjct: 550 CAPNFVTYRVLINHCCSTGLLDEAHKLLEE 579
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 113/267 (42%), Gaps = 19/267 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ K+ + +A ++ +ML P+I Y ++ L + G +++ + I ++
Sbjct: 295 YTALIHAYLKSRKVSKANEVYEMMLSK-GCTPNIVTYTALIDGLCKAGKIEKASQ-IYKI 352
Query: 291 RQKPSKRIKN--MHRKNWDPVL-EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+K + I + MH + D EP++ Y A+++ ++Q K + K + G +P
Sbjct: 353 MKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEP 412
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ Y L+ + GK++EA M + G Y L L
Sbjct: 413 NHVVY------------DALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLF 460
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
+ R A+ V+ K+ P + +T +I G D+ + M++ C PN+
Sbjct: 461 KDKRLDLALKVLSKMLE-NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNV 519
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETT 493
T AM+ + ++ K EL ++ +
Sbjct: 520 VTYTAMIDGFGKSGRVEKCLELLQQMS 546
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/142 (19%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT+++ L K G+ EA ++ +M+E+ P++ Y ++ G+ G +++ ++L+++
Sbjct: 486 IYTEMIDGLCKVGKTDEAYKLM-VMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQ 544
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K P+ V Y ++N C + + ++++++
Sbjct: 545 MSSKGCA---------------PNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHV 589
Query: 350 ATYGLAMESYRRCLLKVLVRAF 371
A Y +E + R + L +F
Sbjct: 590 AGYRKVIEGFNREFIASLYLSF 611
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 187/432 (43%), Gaps = 64/432 (14%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VLV+ + E+ + + F + +S L+ T+ ++ L+KGL D G W +A+ + +W+
Sbjct: 117 VLVNSIVEQPLPRLSSFFDSV--KSELLTTD--LVSLVKGLDDSGHWERAVFLFEWLVLS 172
Query: 220 KDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQV 277
+ LK V L+ ILG+ + A ++ + + L+D L D+ AY ++ +
Sbjct: 173 SNSGALKLDHHVIEILVRILGRESQYSVAAKLLDKIPLQDYML--DVRAYTTILHAYSRT 230
Query: 278 GLLKELVKLIERMRQ-KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP-SHQWKGVFW 335
G ++ + L ERM++ PS P LV YN +L+ W+ +
Sbjct: 231 GKYEKAINLFERMKEMGPS----------------PTLVTYNVILDVFGKMGRSWRKILG 274
Query: 336 VFKQLRKSGLK----------PSAATYGLAMES------YRRC-------LLKVLVRAFW 372
V +++R GLK + A GL E+ + C L++ F
Sbjct: 275 VLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFG 334
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
+ G EA++ ++ ME+ + Y EL G ++A +V+E + + P
Sbjct: 335 KAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQ-KGVMPNA 393
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
IT+T +I + G D+ + +F MK+ C PN T NA+L + + S++ E+ +
Sbjct: 394 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKK---SRSNEMIKM 450
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
S+G P+ T++++L ++ V++ M G + D+
Sbjct: 451 LCDMKSNG----------CFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDT 500
Query: 552 HAWLLVEASRAG 563
L+ R G
Sbjct: 501 FNTLISAYGRCG 512
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 181/459 (39%), Gaps = 63/459 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M S + T +L + +G SWR+ + VL+ + K D F + +L+ +
Sbjct: 246 MGPSPTLVTYNVILDVFGKMGR--SWRKILGVLEEMRSKGLKFD---EFTCSTVLSACAR 300
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G EA + F L+ C P Y+++ G+ G+ E + +++ M +
Sbjct: 301 EGLLREA-KDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE-------- 351
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
N P D V YN ++ A + K V + + + G+ P+A TY
Sbjct: 352 ----NNCPA---DSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITY-------- 396
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
++ A+ + GK +EA+ +M++ G V Y + L R + + ++
Sbjct: 397 ----TTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLC 452
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC--EPNIGTVNAMLKVYSR 478
+KS P T+ ++ + G +F+ MK C EP+ T N ++ Y R
Sbjct: 453 DMKS-NGCFPNRATWNTILALCGNKGMDKFVNRVFREMKS-CGFEPDRDTFNTLISAYGR 510
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
A +++ E TRA + TY+++L A A W E V
Sbjct: 511 CGSEVDASKMYGEMTRAGFNACV-------------TTYNALLNALARKGDWRSGENVIS 557
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
M G + +T ++ +L ++ G +E +E G +F + ML++ ++ +
Sbjct: 558 DMKSKGFKPTETSYSLMLQCYAKGGNYLGIER-----IEEGINEGQIFPSWMLLRTLLLA 612
Query: 599 NY--------EKAVALINAMAYAPFHITERQWTELFESN 629
N+ E+A L Y P + +F N
Sbjct: 613 NFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRN 651
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/435 (17%), Positives = 163/435 (37%), Gaps = 70/435 (16%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
+ +M Q G+M ++ G G +A+ + Y +K+ + + Y +L++
Sbjct: 381 IEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLF---YSMKEAGCVPNTCTYNAVLSM 437
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ----- 292
LGK R +E +++ M + +P+ A ++++ G G+ K + ++ M+
Sbjct: 438 LGKKSRSNEMIKMLCDMKSN-GCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEP 496
Query: 293 -------------------KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
SK M R ++ + YNA+LNA W+
Sbjct: 497 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACV----TTYNALLNALARKGDWRSG 552
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRR-----------------------CLLKVLVRA 370
V ++ G KP+ +Y L ++ Y + LL+ L+ A
Sbjct: 553 ENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLA 612
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
++ + + A ++ G ++ + N + A +++ I P
Sbjct: 613 NFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHE-DGLNP 671
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+T+ L+ + G I + + K +P++ + N ++K + R + +A +
Sbjct: 672 DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRML 731
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
E T ++P +TY++ + + E V + MA + C+ ++
Sbjct: 732 SEMTERG-------------IRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNE 778
Query: 550 TKHAWLLVEASRAGK 564
++ RAGK
Sbjct: 779 LTFKMVVDGYCRAGK 793
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 124/306 (40%), Gaps = 57/306 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L KG WR +V+ D+KS K +P E ++LML
Sbjct: 539 LLNALARKGDWRSGENVIS---------DMKS------------KGFKPTET--SYSLML 575
Query: 256 EDCNLYPDIAAYHSV-----AVTLGQV----GLLKELVKLIERMRQ-KPSKRIKNMHRKN 305
+ Y Y + + GQ+ LL+ L+ + R S+R + +K+
Sbjct: 576 Q---CYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKH 632
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
+PD+V++N++L+ ++ + + + + + GL P TY M+ Y R
Sbjct: 633 G---YKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVR---- 685
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
G+ +A ++ +E+ + Y + C G Q+A+ ++ ++
Sbjct: 686 --------RGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTE- 736
Query: 426 RHSKPLEITFTGLI--ISSMDG-GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMF 482
R +P T+ + ++M G I+D I K+ C PN T ++ Y R +
Sbjct: 737 RGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMA--KNDCRPNELTFKMVVDGYCRAGKY 794
Query: 483 SKAKEL 488
S+A +
Sbjct: 795 SEAMDF 800
Score = 39.3 bits (90), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 75/199 (37%), Gaps = 34/199 (17%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA---VTLGQVGLLKELVKL 286
++ +L+I + +A I + ED L PD+ Y+S+ V G+ +E++K
Sbjct: 640 IFNSMLSIFTRNNMYDQAEGILQSIHED-GLNPDLVTYNSLMDMYVRRGECWKAEEILKT 698
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+E+ + L+PDLV YN V+ + + ++ + G++
Sbjct: 699 LEKSQ------------------LKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIR 740
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P TY V + G E + M + + +
Sbjct: 741 PCIFTY------------NTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGY 788
Query: 407 CNNGRWQDAMLVVEKIKSL 425
C G++ +AM V KIK+
Sbjct: 789 CRAGKYSEAMDFVSKIKTF 807
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/457 (20%), Positives = 185/457 (40%), Gaps = 63/457 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M GL E L++G ++G+ A+ + + + S L+ K
Sbjct: 237 MGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCP---SSNVTVNVLVHGYCK 293
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
GR E L + M + PD ++S+ L ++G +K +++++ M Q+
Sbjct: 294 EGRIEEVLSFIDEMSNE-GFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEG------ 346
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+PD+ YN+++ + + + Q+ P+ TY
Sbjct: 347 ---------FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTY-------- 389
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACCLCNNGRWQDAMLV 418
L+ +E ++ EA R + +G++ + L CL NN R AM +
Sbjct: 390 ----NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRL--AMEL 443
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 477
E++K+ + P E T+ LI S G +++ +S+ + M+ C N+ T N ++ +
Sbjct: 444 FEEMKT-KGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFC 502
Query: 478 RNDMFSKAKELFEE-----TTRANSSGYTFLSG-------------------DGAPLKPD 513
+N +A+E+F+E +R + T + G +G LKPD
Sbjct: 503 KNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEG--LKPD 560
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
++TY+S+L A + + + M +GC+ D + L++ S+AG+ L
Sbjct: 561 KFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLR 620
Query: 574 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
++ G + P + ++ + +AV L M
Sbjct: 621 TVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREM 657
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 112/293 (38%), Gaps = 43/293 (14%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY---------- 359
++PD+ +N ++ A +HQ + + +++ GL P T+ M+ +
Sbjct: 207 IKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGAL 266
Query: 360 -------------RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
+ VLV + +EG+I E ++ + M G + L L
Sbjct: 267 RIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGL 326
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEP 464
C G + A+ +++ + P T+ LI G +++ + I M +D P
Sbjct: 327 CRIGHVKHALEILDVMLQ-EGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDF-SP 384
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
N T N ++ + + +A EL T S G + PD T++S+++
Sbjct: 385 NTVTYNTLISTLCKENQVEEATELARVLT---SKG----------ILPDVCTFNSLIQGL 431
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+ +++ M GC D+ + L+ G+ LE A L E
Sbjct: 432 CLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGR---LEEALSLLKE 481
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 86/215 (40%), Gaps = 36/215 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ GL +A ++D + GLK +F Y LL +AG +A I
Sbjct: 532 LIDGLCKNRRVEEAAQLMDQMLMEGLK-----PDKFTYNSLLTYFCRAGDIKKAADIVQT 586
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M + PD Y ++ + L + G V+L R+ + + ++K M VL P
Sbjct: 587 MTSN-GCEPDSVTYGTLILGLSKAGR----VELASRLLR--TVQLKGM-------VLAPQ 632
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
YN V+ A + +F+++ + G P A TY KV+ R
Sbjct: 633 --TYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTY------------KVVFRGLCS 678
Query: 374 -EGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
G I EAV + M +G + S + LA LC
Sbjct: 679 GGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLC 713
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/463 (20%), Positives = 190/463 (41%), Gaps = 58/463 (12%)
Query: 193 MLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA-ILGKAGRPHEALRIF 251
++ +LK L G +A+ + +W+ ++ +L+A ILG+ + A ++F
Sbjct: 138 LIGVLKALDLSGDCERAILLFEWLVLNLGTGNVNLDNQAVELMARILGRESQHSIASKLF 197
Query: 252 NLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL 310
+++ L+D +L D+ AY ++ + + G + V + E+M + L
Sbjct: 198 DVIPLDDYSL--DVRAYTTILHSYSRCGKYERAVAIFEKMNESG---------------L 240
Query: 311 EPDLVVYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAAT------------------ 351
P LV YN +L+ W + + ++R GL T
Sbjct: 241 SPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAK 300
Query: 352 ---YGLAMESYR--RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
GL + Y L++ F + G +EA++ ++ ME A Y EL
Sbjct: 301 EFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAY 360
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 465
G +++ +++ + KP +T+T +I + +D +S++ MK+ C PN
Sbjct: 361 VRAGFYEEGAALIDTMTE-NGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPN 419
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T NA+L + + S+++E+ + G P+ T+++ML
Sbjct: 420 VCTYNAILGMLGKK---SQSEEMMKILCDMKVDG----------CAPNRITWNTMLSMCG 466
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+Y + V++ M G + D+ L+ + R G E +D +LEAG P
Sbjct: 467 NKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVA 526
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
+ +L + ++ A ++I M F +E ++ + S
Sbjct: 527 TYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNS 569
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 97/493 (19%), Positives = 199/493 (40%), Gaps = 69/493 (13%)
Query: 181 MNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
MN+SGL + T ML + +G SW + + +LD ++ K F + +++
Sbjct: 235 MNESGLSPTLVTYNVMLDVYGKMGR--SWNKILGLLDE---MRSKGLGFDEFTCSTVISA 289
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
G+ G EA F + L+ P Y+++ G+ G+ E + +++ M
Sbjct: 290 CGREGLLDEAKEFF-VGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEME------ 342
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
D PD V YN ++ A V + ++ + + ++G+KP+A TY
Sbjct: 343 ---------DNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTY----- 388
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
++ A+ ++++A++ M++ G Y + L + ++ M
Sbjct: 389 -------TTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMK 441
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC--EPNIGTVNAMLKV 475
++ +K + P IT+ ++ + G +FQ MK C EP+ T N ++
Sbjct: 442 ILCDMK-VDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKS-CGFEPDRDTFNTLITA 499
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
R A+++++E A G+T P TY+++L A A W E
Sbjct: 500 SGRCGSDIDAEKIYDEMLEA---GFT----------PSVATYNALLNALARRGDWRTAES 546
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
V K M G + +T ++ +L ++ G + +E +F + ML++ +
Sbjct: 547 VIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINR-----IEKDIYDGHIFPSWMLLRTL 601
Query: 596 VQSNY--------EKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCN 647
+ +N+ E+A + Y P + +F D+ ++++ +
Sbjct: 602 ILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKN---MHDRAHEIMHLIQE 658
Query: 648 CNAASSEITVSNL 660
C +T ++L
Sbjct: 659 CGLQPDLVTYNSL 671
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 99/493 (20%), Positives = 178/493 (36%), Gaps = 121/493 (24%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M GL F E ++ G +G +A ++ GLK + Y LL + GK
Sbjct: 271 MRSKGLGFDEFTCSTVISACGREGLLDEAK---EFFVGLKSQGYAPGTVTYNALLQVFGK 327
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSK- 296
AG EAL I M ED N PD Y+ + + G +E LI+ M + KP+
Sbjct: 328 AGIYSEALSIMKEM-EDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAV 386
Query: 297 ----------------RIKNMHRKNWDPVLEPDLVVYNAVL------------------- 321
+ +++ + + P++ YNA+L
Sbjct: 387 TYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDM 446
Query: 322 --NACVPSH-QW-------------KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
+ C P+ W K V VF++++ G +P T+ + + RC
Sbjct: 447 KVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSD 506
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+ ++E M + G + + Y L L G W+ A V++ +K+
Sbjct: 507 IDAEKIYDE------------MLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKN- 553
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISI------------------------------- 454
+ KP E +++ ++ S GG++ I
Sbjct: 554 KGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAG 613
Query: 455 ----FQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
FQ ++ H +P++ N+ML ++SR +M +A E+
Sbjct: 614 MERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECG------------- 660
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
L+PD TY+S+++ A + E + + + SG + D + ++ R G H
Sbjct: 661 LQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEAL 720
Query: 570 HAFDSLLEAGEIP 582
++ G P
Sbjct: 721 RTLSEMISRGIRP 733
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 116/304 (38%), Gaps = 33/304 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L +G WR A SV+ +K+K S Y+ +L K G RI +
Sbjct: 531 LLNALARRGDWRTAESVIK---DMKNKGFKPSETSYSLILNSYAKGGYVKGINRI-EKDI 586
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D +++P ++ + + L + + + +++ K PDLV
Sbjct: 587 YDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYK---------------PDLV 631
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
V+N++L+ + + +++ GL+P TY M+ Y R G
Sbjct: 632 VFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYAR------------GG 679
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ +A +R ++ G Y + C G +A+ + ++ S R +P +T+
Sbjct: 680 ECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMIS-RGIRPCIVTY 738
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
+ G + + +M H C PN T ++ Y + F +A + T
Sbjct: 739 NTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMDFVSTITD 798
Query: 495 ANSS 498
+ S
Sbjct: 799 IDDS 802
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 173/400 (43%), Gaps = 71/400 (17%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
D++SR TKL+ L + GRP EA IFN ++E+ + P + Y ++ L + L
Sbjct: 341 DVRSR---TKLMNGLIERGRPQEAHSIFNTLIEEGH-KPSLITYTTLVTALTRQKHFHSL 396
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ LI ++ + L+PD +++NA++NA S +F+++++S
Sbjct: 397 LSLISKVEKNG---------------LKPDTILFNAIINASSESGNLDQAMKIFEKMKES 441
Query: 344 GLKPSAATYGLAMESY--------------------------RRCLLKVLVRAFWEEGKI 377
G KP+A+T+ ++ Y R C +LV+A+ + KI
Sbjct: 442 GCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTC--NILVQAWCNQRKI 499
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITF 435
EA V M+ GV + LA G A ++ I + H+ KP T
Sbjct: 500 EEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI--IPRMLHNKVKPNVRTC 557
Query: 436 TGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVY-SRNDM--FSKAKELFEE 491
++ + G +++ + F MK+ PN+ N+++K + + NDM + +L EE
Sbjct: 558 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE 617
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
+KPD T+S+++ A ++ + E +Y M G D
Sbjct: 618 FG----------------VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHA 661
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L +RAG+ E + + + G P+ + +T+++
Sbjct: 662 FSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQII 701
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 162/403 (40%), Gaps = 50/403 (12%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+L+ L + GRP +A R+ C + AY ++ + G L + +++ M
Sbjct: 108 RLVRDLCRRGRPDDAERVVGA----CGPAATVVAYGALTDGYCRAGRLGDARRVVGGMPV 163
Query: 293 KPSKRIKN--MHR-------KNWDPVLE--------PDLVVYNAVLNACVPSHQWKGVFW 335
+P+ N +H ++ VL+ PD+V YN +L A ++
Sbjct: 164 QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 223
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+ +R G P+ TY VL+ EG +++A+ +RN+ G +
Sbjct: 224 LIDLMRAEGCTPNNVTY------------NVLMDGMCGEGDVDDALELLRNLPSHGCKPS 271
Query: 396 ASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
Y + LC+ RW DA LV E ++ + P E TF +I S G + I +
Sbjct: 272 TVNYNTVLKGLCSAERWGDADELVTEMLR--ENCPPNEATFNVVIYSLCRKGLLQQAIQL 329
Query: 455 FQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 513
+ M H C NI T NA++ A L ++ S G KPD
Sbjct: 330 LEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLL---SKMKSYG----------CKPD 376
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
TY+++L+ +A QW E + M +GC D L+ + G F
Sbjct: 377 IVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFK 436
Query: 574 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 616
+ + G P+ + ++ ++ + ++A+ L N M + F+
Sbjct: 437 QMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFN 479
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 150/400 (37%), Gaps = 107/400 (26%)
Query: 122 KDLNWVLDDDVQLGS--DYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVR 179
+D VLDD + G D N+ + R +A+ L+D + T N +
Sbjct: 184 RDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME-LIDLMRAEGCTPNNVTYNV 242
Query: 180 IMNQSGLMFTEGQM---LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
+M+ M EG + L+LL+ L G S Y +L
Sbjct: 243 LMDG---MCGEGDVDDALELLRNLPSHGCK-------------------PSTVNYNTVLK 280
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS- 295
L A R +A + ML + N P+ A ++ V +L + GLL++ ++L+E+M +
Sbjct: 281 GLCSAERWGDADELVTEMLRE-NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCT 339
Query: 296 ------KRIKN--MHRKNWDPVL-----------EPDLVVYNAVLNACVPSHQW------ 330
I N ++N D + +PD+V YN +L + QW
Sbjct: 340 ANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEEL 399
Query: 331 -------------------------KGVFW----VFKQLRKSGLKPSAATY-----GLA- 355
KG+ VFKQ+ G P++ TY GLA
Sbjct: 400 MDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAK 459
Query: 356 -------MESYRRC---------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+E + + ++L ++ I EA+ VR ++ G+ +Y
Sbjct: 460 ATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLY 519
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
+ LC NG+ + A+ ++ + S P ++T+ LI
Sbjct: 520 NAILLGLCRNGKTEFAIDIMAYMVS-SGCMPDDLTYVILI 558
>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
Length = 810
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 177/441 (40%), Gaps = 59/441 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M +SG + ++ L G +AM VLD + + R + VY ++++ L +
Sbjct: 229 MIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGV---IVYNEIISCLAE 285
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
GR EAL +F+ M PDI +Y++V L + G ++ LI M +K
Sbjct: 286 LGRVEEALHLFDQM----PCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCP---- 337
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
PD V +N V++ V +Q+ K G KP TY
Sbjct: 338 -----------PDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTY-------- 378
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD-AMLVV 419
LV A E G +++A+ +R + + Y + LC RW D LV
Sbjct: 379 ----SALVNALSERGCVDDALELLRTIPWK---PNTVCYRSVLKGLCRADRWDDVGKLVA 431
Query: 420 EKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 477
E I++ + E+TF GLII + G +D + + M K C P+I N+++ +S
Sbjct: 432 EMIRNQLNLD--EVTF-GLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFS 488
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
N A ELF+ + K + TY+ ML+ A QWE +
Sbjct: 489 ENGSVDDALELFKNMS----------------CKRNVVTYNYMLKGLCRAEQWEDAGKLV 532
Query: 538 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 597
M C ++ + L+ + G F+ + + +P+ + ++ ++ Q
Sbjct: 533 AEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQ 592
Query: 598 SNYEKAVALINAMAYAPFHIT 618
+ A+ L+N M P I
Sbjct: 593 ECVDDALKLLNDMPCKPDTIC 613
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/375 (19%), Positives = 148/375 (39%), Gaps = 66/375 (17%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PDI Y+S+ + G + + ++L KNM K ++V YN +L
Sbjct: 475 PDIIIYNSLINGFSENGSVDDALELF-----------KNMSCKR-------NVVTYNYML 516
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYG-----LAMESYRRCLLKV---------- 366
+ QW+ + ++ K P+ T+ L + + C ++V
Sbjct: 517 KGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCM 576
Query: 367 --------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-CLCNNGRWQDAM- 416
L+ ++ +++A+ + +M + ++ Y A LC RW+DA
Sbjct: 577 PNVIIYSTLINGLSDQECVDDALKLLNDMPCK----PDTICYSAALKGLCRAERWEDAGE 632
Query: 417 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKV 475
L++E I+ ++ P E+TF+ LI + G ++ + + M K C PN+ ++++
Sbjct: 633 LILEMIR--KNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLING 690
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
++ A +L P +PD YS+ L+ A +WE
Sbjct: 691 FAEQYRAEDALQLLRNM----------------PCEPDTICYSAALKGLCRAKRWEDARE 734
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
+ M C LD+ + L+ + G + F+ + G P+ + ++
Sbjct: 735 LIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNGYS 794
Query: 596 VQSNYEKAVALINAM 610
Q ++ + L+++M
Sbjct: 795 EQRRVDEGLKLLSSM 809
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 107/284 (37%), Gaps = 44/284 (15%)
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
R+ + R D P+ + +L + +W + ++ +SG P+ T+G+ +
Sbjct: 186 RLNDARRLVADMPFAPNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMII 245
Query: 357 ESY------------------RRCLLKVLV-----RAFWEEGKINEAVAAVRNMEQRGVV 393
S RC V+V E G++ EA+ M + +
Sbjct: 246 HSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMPCKPDI 305
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
+ Y + LC +GRW+DA ++ + + P E+TF +I G +D +
Sbjct: 306 FS---YNTVMKGLCRDGRWEDAGTLIAGMVR-KDCPPDEVTFNTVISYLCHRGLVDCAME 361
Query: 454 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
+ + M + C+P+ T +A++ S A EL P KP
Sbjct: 362 VVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTI----------------PWKP 405
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ Y S+L+ A +W+ + M + LD+ ++
Sbjct: 406 NTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLII 449
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 98/257 (38%), Gaps = 23/257 (8%)
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKS 424
LV + EG++N+A V +M T S + LC+N W DA L+ E I+S
Sbjct: 176 TLVAGYCREGRLNDARRLVADMPFAPNSYTNSTLLKG---LCSNKEWDDAEELLSEMIRS 232
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFS 483
P ++TF +I S G D + + M K C + N ++ +
Sbjct: 233 --GCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVE 290
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
+A LF D P KPD ++Y+++++ +WE + GM
Sbjct: 291 EALHLF----------------DQMPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRK 334
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
C D+ ++ G + + + G P ++ ++ + + A
Sbjct: 335 DCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDA 394
Query: 604 VALINAMAYAPFHITER 620
+ L+ + + P + R
Sbjct: 395 LELLRTIPWKPNTVCYR 411
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 173/400 (43%), Gaps = 71/400 (17%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
D++SR TKL+ L + GRP EA IFN ++E+ + P + Y ++ L + L
Sbjct: 318 DVRSR---TKLMNGLIERGRPQEAHSIFNTLIEEGH-KPSLITYTTLVTALTRQKHFHSL 373
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ LI ++ + L+PD +++NA++NA S +F+++++S
Sbjct: 374 LSLISKVEKNG---------------LKPDTILFNAIINASSESGNLDQAMKIFEKMKES 418
Query: 344 GLKPSAATYGLAMESY--------------------------RRCLLKVLVRAFWEEGKI 377
G KP+A+T+ ++ Y R C +LV+A+ + KI
Sbjct: 419 GCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTC--NILVQAWCNQRKI 476
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITF 435
EA V M+ GV + LA G A ++ I + H+ KP T
Sbjct: 477 EEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI--IPRMLHNKVKPNVRTC 534
Query: 436 TGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVY-SRNDM--FSKAKELFEE 491
++ + G +++ + F MK+ PN+ N+++K + + NDM + +L EE
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE 594
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
+KPD T+S+++ A ++ + E +Y M G D
Sbjct: 595 FG----------------VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHA 638
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L +RAG+ E + + + G P+ + +T+++
Sbjct: 639 FSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQII 678
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 187/482 (38%), Gaps = 63/482 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL D G +A D + + L + T + L G +A R+F + +
Sbjct: 461 LINGLCDSGRVNEA---FDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLF-VDM 516
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ P++ Y ++ L GLLK + L RM + D V P+ V
Sbjct: 517 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR--------------DGVF-PNTV 561
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL----------- 364
YNA++N V + + K F V + ++GL + TY ++ Y C+L
Sbjct: 562 TYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGY--CILGDPKKAMLVMN 619
Query: 365 --------------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+++ + + G A+ + M G Y EL C C
Sbjct: 620 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 679
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTV 469
+ + A + ++ P E+T+T LI +D S+ +HMK C PN+ T
Sbjct: 680 KMESAFGLFNEMVD-DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 738
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
N ++ ++ + FS A+EL + + P+ TY++M++
Sbjct: 739 NVLIHGLTKQNNFSGAEELCKVMIEEG-------------IFPNVVTYTAMIDGLCKNGS 785
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
++ M GC + ++ L+ + GK E+ F L G IP + + +
Sbjct: 786 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 845
Query: 590 MLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES--NEDRISRDKLEKLLNALCN 647
M+ I+ E A + M A T + L + NE ++ +L L + + N
Sbjct: 846 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPN 905
Query: 648 CN 649
C+
Sbjct: 906 CS 907
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 160/460 (34%), Gaps = 103/460 (22%)
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
ML L + AY ++ + L ++G+ ++ RM + ++P+
Sbjct: 340 MLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG---------------VQPN 384
Query: 314 LVVYNAVLNACVPS-----------------------------------HQWKGVFWVFK 338
L++YNAV+NA H VF
Sbjct: 385 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 444
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
Q+ K G +P+ TY L+ + G++NEA +R M G++ TA
Sbjct: 445 QMAKEGCEPNTVTY------------STLINGLCDSGRVNEAFDLIREMILHGILPTAHT 492
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
LC+ G ++DA + +K+ + +P T+T LI G + I +F M
Sbjct: 493 CTGPIIALCDMGCYEDAWRLFVDMKN-KGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 551
Query: 459 -KDHCEPNIGTVNAMLKVYSRNDMFSKA---------KELFEETTRANS--SGYTFLSGD 506
+D PN T NA++ + N A LF N GY L
Sbjct: 552 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCIL--- 608
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
G P K ++ML+ +A+ Y + KG SG T A +++ R G C
Sbjct: 609 GDP-KKAMLVMNNMLQRGHSANLVTY-NTIIKGYCDSG----NTTSALRILDLMRDGGCK 662
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 626
P +TE++ S E A L N M E +T L
Sbjct: 663 ---------------PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALI 707
Query: 627 ESNEDRISRDKLEKLLNAL----CNCNAASSEITVSNLSR 662
+ D LL + C N + + + L++
Sbjct: 708 DGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK 747
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 141/330 (42%), Gaps = 48/330 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL + G W +L + G + + ++ L+ + K G+ EA ++N M+
Sbjct: 315 LIGGLCNDGKWDDGAKMLREMIG---RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 371
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD Y+S+ + L E ++ + M K EPD+V
Sbjct: 372 TR-GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC---------------EPDIV 415
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y+ ++N+ + + +F+++ GL P+ TY LV F + G
Sbjct: 416 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY------------NTLVLGFCQSG 463
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
K+N A + M RGV + Y L LC+NG A+ + EK++ R + L I
Sbjct: 464 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT--LGIGI 521
Query: 436 TGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+II M + +DD S+F + D +P++ T N M+ + S+A LF +
Sbjct: 522 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK-- 579
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+ DG PD++TY+ ++ A
Sbjct: 580 ---------MKEDGC--TPDDFTYNILIRA 598
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 153/370 (41%), Gaps = 43/370 (11%)
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
GR EA+ + + M+E PD+ ++ L G + E + LI+RM +
Sbjct: 183 GRVSEAVALVDRMVE-MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG------- 234
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
+PD V Y VLN S +F+++ + +K S Y + ++S
Sbjct: 235 --------FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS--- 283
Query: 362 CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
++G ++A++ ME +G+ Y L LCN+G+W D ++ +
Sbjct: 284 ---------LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 334
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 480
+ R+ P +TF+ LI + G + + ++ M P+ T N+++ + + +
Sbjct: 335 MIG-RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 393
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
+A ++F+ + G +PD TYS ++ + A + + +++ +
Sbjct: 394 CLHEANQMFD-----------LMVSKGC--EPDIVTYSILINSYCKAKRVDDGMRLFREI 440
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 600
+ G + + L++ ++GK + + F ++ G P + + +L
Sbjct: 441 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 500
Query: 601 EKAVALINAM 610
KA+ + M
Sbjct: 501 NKALEIFEKM 510
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/398 (18%), Positives = 156/398 (39%), Gaps = 48/398 (12%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++RL + +A R M + + + Q ++ L GS+ A+S+ + +
Sbjct: 245 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM---- 300
Query: 221 DKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ + +K+ V Y+ L+ L G+ + ++ M+ N+ PD+ + ++ + G
Sbjct: 301 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVVTFSALIDVFVKEGK 359
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L E +L M + + PD + YN++++ + +F
Sbjct: 360 LLEAKELYNEMITRG---------------IAPDTITYNSLIDGFCKENCLHEANQMFDL 404
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ G +P TY +L+ ++ + ++++ + R + +G++ Y
Sbjct: 405 MVSKGCEPDIVTY------------SILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 452
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 458
L C +G+ A + +++ S R P +T+ L+ D G ++ + IF+ M
Sbjct: 453 NTLVLGFCQSGKLNAAKELFQEMVS-RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 511
Query: 459 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
K IG N ++ A LF LS G +KPD TY+
Sbjct: 512 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLF-----------CSLSDKG--VKPDVVTYN 558
Query: 519 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
M+ + +++ M GC D + L+
Sbjct: 559 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 131/320 (40%), Gaps = 48/320 (15%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+E D+ ++N + F V + K G +P T+ LV
Sbjct: 130 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITF------------STLVN 177
Query: 370 AFWEEGKINEAVAAVR---NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
F EG+++EAVA V M+QR + T S L LC GR +A+++++++
Sbjct: 178 GFCLEGRVSEAVALVDRMVEMKQRPDLVTVST---LINGLCLKGRVSEALVLIDRMVEYG 234
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKA 485
+P E+T+ ++ G+ + +F+ M++ + + ++ + ++ ++ F A
Sbjct: 235 F-QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 293
Query: 486 KELFEET----TRANSSGYTFLSG---------DGAPL---------KPDEYTYSSMLEA 523
LF E +A+ Y+ L G DGA + PD T+S++++
Sbjct: 294 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 353
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
+ + +Y M G D + L+ + H FD ++ G P
Sbjct: 354 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP- 412
Query: 584 PLFFTEMLIQAIVQSNYEKA 603
+++ +I+ ++Y KA
Sbjct: 413 -----DIVTYSILINSYCKA 427
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 174/422 (41%), Gaps = 79/422 (18%)
Query: 185 GLMFTEGQMLK-LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGR 243
GL + + + L LLK L G +A + DW+ L D +L
Sbjct: 26 GLFYLDSRALAALLKELHKVGLSNRASELFDWLRSLPDNHELAHL--------------- 70
Query: 244 PHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR 303
C++Y Y ++ G L++ ++L+ MR + N+H
Sbjct: 71 --------------CDVY----TYTTIISQCGSHQQLRKALELVAEMRGH--GVVCNVH- 109
Query: 304 KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCL 363
Y+A++N C+ +++ + V+ QL + G P+ TY
Sbjct: 110 ------------TYSALMNVCIKANELELALDVYGQLLREGCTPNLVTY----------- 146
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
+L+ + G EAV + +E +G Y + +G+ + A+ V E++
Sbjct: 147 -NILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVYERML 205
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMF 482
+ ++P T+T LI + G I++ + IFQ M + CE N+ T ++++ + +
Sbjct: 206 A-DGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRW 264
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
A EL +E R N KP+ T++++L A A QW+ + V++ M
Sbjct: 265 QLALELLDEMHRDNC-------------KPNTVTFNALLSACAQGGQWKAAQDVFEQMPS 311
Query: 543 SGCQLDQTKHAWLLVEASRAGK-CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 601
GC+ D +A L+ R + C L+ A D + G P + ++I+A+ +S
Sbjct: 312 CGCKPDAVSYAILISAFDRGNQWCRALQ-ALDEMQGQGHRPDVGVYN-VVIEALTRSGVL 369
Query: 602 KA 603
A
Sbjct: 370 SA 371
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 107/247 (43%), Gaps = 19/247 (7%)
Query: 434 TFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T++ L+ + ++ + ++ Q +++ C PN+ T N ++ ++ + + +A ++ +
Sbjct: 110 TYSALMNVCIKANELELALDVYGQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDA- 168
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
L G KP+ TY+++L A + Q E+ VY+ M G Q T +
Sbjct: 169 ----------LEDQGT--KPEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTATTY 216
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM-- 610
L+ + GK F ++ G + + ++ ++ ++ A+ L++ M
Sbjct: 217 TALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLALELLDEMHR 276
Query: 611 -AYAPFHIT-ERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALC 668
P +T + + + + ++D E++ + C +A S I +S R + C
Sbjct: 277 DNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAILISAFDRG-NQWC 335
Query: 669 RSEKERD 675
R+ + D
Sbjct: 336 RALQALD 342
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 107/519 (20%), Positives = 206/519 (39%), Gaps = 70/519 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
+++GL D+G A+++LD + + S YT LL + K+ EA+ + + M
Sbjct: 147 IIRGLCDRGRVGDALALLD---DMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMR 203
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C P+I Y+ + + + G + + +++ R+ +PD+
Sbjct: 204 AKGCT--PNIVTYNVIINGMCREGRVDDAKEILNRLSSYG---------------FQPDI 246
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR------------- 361
V Y VL + +W V +F ++ P+ T+ + + + R
Sbjct: 247 VSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQ 306
Query: 362 -----C-----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
C L +++ A ++G++++A + NM G Y + LC GR
Sbjct: 307 MSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGR 366
Query: 412 WQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
W+ A L+ E ++ ++ P E+TF I G I+ I + + M ++ C I T
Sbjct: 367 WEHAKELLPEMVR--KNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTY 424
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
NA++ + A ELF + P +P+ TY+++L A +
Sbjct: 425 NALVHGFCVQGRVDSALELF----------------NNLPCEPNTITYTTLLTGLCHAER 468
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
+ + GM C L+ L+ + G + ++E G P+ + F
Sbjct: 469 LDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNT 528
Query: 590 MLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISR-DKLEKLLNALCNC 648
+L N E+A+ L++ + + T + S D +SR D+ E+ + L
Sbjct: 529 LLDGITKDCNSEEALELLHGLVSKGVSLD----TITYSSVVDVLSREDRTEEAIQMLHAV 584
Query: 649 NAASSEITVSNLSRALHALC-RSEKERDLSSSAHFGSQA 686
V ++ L ALC R E ++ + A+ S
Sbjct: 585 QDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNG 623
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 93/457 (20%), Positives = 170/457 (37%), Gaps = 62/457 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
++ TKL+ L + GR +A R+ E D+ AY+++ + G L +LI
Sbjct: 75 YLCTKLIRNLCRRGRTSDAARVLRTA-EASGAPVDVFAYNTLVAGYCRYGRLDAARRLIA 133
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M PV PD Y ++ + + + + G +PS
Sbjct: 134 SM-----------------PV-PPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPS 175
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY VL+ A + EA+ + M +G Y + +C
Sbjct: 176 VVTY------------TVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCR 223
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 467
GR DA ++ ++ S +P +++T ++ DD +F M D C PN
Sbjct: 224 EGRVDDAKEILNRLSSYGF-QPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV 282
Query: 468 TVNAMLKVYSRNDMFSKAKELFEE---------TTRAN------------SSGYTFLSGD 506
T + +++ + R M +A ++ ++ TT N Y FL+
Sbjct: 283 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 342
Query: 507 GA-PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
G PD +Y+++L A +WE+ + + M C ++ + + G
Sbjct: 343 GMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKG-- 400
Query: 566 HLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ- 621
L+E A + + E G + + ++ VQ + A+ L N + P IT
Sbjct: 401 -LIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTL 459
Query: 622 WTELFESNEDRISRDKLEKLLNALCNCNAASSEITVS 658
T L + + + L ++ C NA + + VS
Sbjct: 460 LTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVS 496
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 170/445 (38%), Gaps = 95/445 (21%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + L+ L GR +AL +F+ ML P + Y + + ++ + L++
Sbjct: 163 FTFNPLIRALCVRGRVPDALAVFDDMLHR-GCSPSVVTYSILLDATCKASGYRQAMVLLD 221
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR K EPD+V YN ++NA + L G KP
Sbjct: 222 EMRAKGC---------------EPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPD 266
Query: 349 AATYGLAMESY------------------RRC-----LLKVLVRAFWEEGKINEAVAAVR 385
A TY ++S +C +V + ++G ++ A+ V
Sbjct: 267 AVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVD 326
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS--------------------- 424
+M + G + Y + LC+ GR DA+ ++ ++KS
Sbjct: 327 HMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIE 386
Query: 425 -------------LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
P E+TF +I S G +D I + + M ++ C P+I T N
Sbjct: 387 QWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYN 446
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
+++ A EL +N Y KPD T++++L+ + +W
Sbjct: 447 SIIDGLCNERCIDDAMELL-----SNLQSYG--------CKPDIVTFNTLLKGLCSVDRW 493
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIPHPLFF 587
E E + M S C D T ++ + G LL A ++L E G IP+ +
Sbjct: 494 EDAEQLMVNMMHSDCPPDATTFNTVITSLCQKG---LLLQAIETLKIMAENGCIPNQSTY 550
Query: 588 TEMLIQAIVQSN-YEKAVALINAMA 611
+++ A++++ ++A+ L++ M
Sbjct: 551 -NIVVDALLKAGKTQEALKLLSGMT 574
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 118/293 (40%), Gaps = 38/293 (12%)
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ RI++ R PD +N ++ A + VF + G PS TY +
Sbjct: 143 AGRIEDARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSI 202
Query: 355 AMES------YRRCLL-----------------KVLVRAFWEEGKINEAVAAVRNMEQRG 391
+++ YR+ ++ VL+ A EG ++EA+ + ++ G
Sbjct: 203 LLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHG 262
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
A Y + LC + RW++ + ++ S P E+TF ++ S G +D
Sbjct: 263 CKPDAVTYTPVLKSLCGSERWKEVEELFAEMAS-NKCAPDEVTFNTIVTSLCQQGLVDRA 321
Query: 452 ISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 510
I + HM +H C P+I T +++L A EL +R S G
Sbjct: 322 IKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELL---SRLKSYG----------C 368
Query: 511 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
KPD Y+++L+ + QWE+ E + M S C D+ ++ + G
Sbjct: 369 KPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKG 421
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 130/331 (39%), Gaps = 37/331 (11%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L ++ + + K V M+++G ++ GL ++ AM +L +
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K D+ + LL L R +A ++ N+M DC PD +++V +L Q GL
Sbjct: 473 CKPDI---VTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCP--PDATTFNTVITSLCQKGL 527
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L + ++ ++ M + P+ YN V++A + + + + +
Sbjct: 528 LLQAIETLKIMAENGCI---------------PNQSTYNIVVDALLKAGKTQEALKLLSG 572
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ P TY ++ + GK+ EA+ +R M G+ Y
Sbjct: 573 MTNG--TPDLITY------------NTVISNITKAGKMEEALDLLRVMVSNGLSPDTITY 618
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 458
LA +C A+ ++ +++ + S P + +++ D I F HM
Sbjct: 619 RSLAYGICREDGTDRAIRMLCRLQDMGLS-PDATFYNDILLGFCQNWRTDIAIDCFAHMV 677
Query: 459 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
C P+ T +L+ + + +AK+L
Sbjct: 678 SSGCMPDESTYIILLEALAYECLLDEAKQLL 708
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 47/248 (18%), Positives = 94/248 (37%), Gaps = 21/248 (8%)
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
+L++ G++ +A R G T Y + C GR +DA ++ S
Sbjct: 102 NILIKRLCSGGRVADAE---RVFATLGASATVVTYNTMVNGYCRAGRIEDA----RRLIS 154
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 483
P TF LI + G + D +++F M C P++ T + +L + +
Sbjct: 155 GMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYR 214
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
+A L +E RA +PD TY+ ++ A + + +
Sbjct: 215 QAMVLLDEM-RAKGC------------EPDIVTYNVLINAMCNEGDVDEALNILSDLPSH 261
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
GC+ D + +L + + +E F + P + F ++ Q ++A
Sbjct: 262 GCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRA 321
Query: 604 VALINAMA 611
+ +++ M+
Sbjct: 322 IKVVDHMS 329
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 168/408 (41%), Gaps = 46/408 (11%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G WR+A+ VLD + K D ++ Y+ +A G A + A+ + M PD
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQN---YSSAIAACGNARQWERAVELLASMAAR-GTPPD 220
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y S +V KE V L+ M+ + K P+++VY+A ++A
Sbjct: 221 VLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVK---------------PNVIVYSAAISA 265
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
C QW+ + K++ GL P TY +++ + R WE A
Sbjct: 266 CRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAK-------RGQWE-----PAFRL 313
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 443
+ M +GVV Y + G+W++A+ ++ +++ P IT++ I +
Sbjct: 314 LMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQE-NGVAPDVITYSSTISACA 372
Query: 444 DGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
G ++ + + + M + PN + ++ ++ + +A +L +E
Sbjct: 373 KKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQE----------- 421
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
+ G P PD YS+ ++A A A +WE ++ + M +G + + + ++
Sbjct: 422 MQAHGVP--PDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKT 479
Query: 563 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
G+ + + G P + ++ ++ + +E+A+ L M
Sbjct: 480 GRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREM 527
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/405 (19%), Positives = 154/405 (38%), Gaps = 78/405 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ +G W A +L + K + + Y+ ++ K G+ EA+ + M
Sbjct: 297 VIDACAKRGQWEPAFRLL---MEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQ 353
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN------------MHR 303
E+ + PD+ Y S + G +E V L +R+ P + + R
Sbjct: 354 EN-GVAPDVITYSSTISACAKKGQWEEAVGL---LREMPMEGVTPNAISYGIVISACAKR 409
Query: 304 KNWDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
W ++ PD++ Y+A ++AC + +W+ W+ +++ +GL P+ +Y
Sbjct: 410 GRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISY 469
Query: 353 GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR- 411
A+++ + G+ AV +R M G+ + Y C GR
Sbjct: 470 NSAIDACAK------------TGRSKIAVELLREMPAHGLAPDV-ITYSAVIASCAMGRQ 516
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNA 471
W++A+ + +++ + P ++ I + GG ++ + + M P +G V
Sbjct: 517 WEEALDLFREMQR-QGITPDVVSCNTAINACAQGGWWEEALDVLGEM-----PTMGLVPD 570
Query: 472 MLKVYSRNDMFSKA---KELFEETTRANSSGYT-----------FLSGDG---------- 507
+ + D +K KE+ + ++ G T S DG
Sbjct: 571 AISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLR 630
Query: 508 ----APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
L PD TY+S + A A +W+ + + M G D
Sbjct: 631 DMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPD 675
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 144/337 (42%), Gaps = 48/337 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ +G WR+A+ +L + D+ Y+ + +A R +AL + M
Sbjct: 402 VISACAKRGRWREAIDLLQEMQAHGVPPDV---INYSAAIDACAQASRWEQALWLLREM- 457
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
L P++ +Y+S + G K V+L +R+ P+ L PD++
Sbjct: 458 PATGLTPNVISYNSAIDACAKTGRSKIAVEL---LREMPAHG------------LAPDVI 502
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y+AV+ +C QW+ +F+++++ G+ P + A+ + + +WEE
Sbjct: 503 TYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQ-------GGWWEE- 554
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG-RWQDAMLVVEKIKSLRHSKPLEIT 434
A+ + M G+V A + Y A C G RW++ + ++ ++ ++ + P I+
Sbjct: 555 ----ALDVLGEMPTMGLVPDA-ISYRTAIDACAKGDRWKEIIDLLREMSTVGLT-PDAIS 608
Query: 435 FT-GLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+ + S+DG + + + + P++ T N+ + ++ + +A L +
Sbjct: 609 YRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMP 668
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
TF L PD ++++ ++A QW
Sbjct: 669 -------TF------GLAPDVNSFNAAIDACGNGDQW 692
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 16/117 (13%)
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
EAL + ML L PD+ Y+S + G KE L +RQ P+
Sbjct: 624 EALVLLRDMLA-VGLSPDVVTYNSAINACAKGGRWKEATVL---LRQMPTFG-------- 671
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
L PD+ +NA ++AC QW V ++R G+ P+ ATY AM + +RC
Sbjct: 672 ----LAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATYLTAMYACKRC 724
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 188/482 (39%), Gaps = 72/482 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G G ++A V++ L+ + Y L++ K+G AL++ + M
Sbjct: 155 LIRGFCRIGKTKKATWVMEI---LEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM- 210
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
N+ PD+ Y+++ TL G LK+ +++++R QK PD++
Sbjct: 211 ---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKEC---------------YPDVI 252
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y ++ A + ++R G KP TY VL+ +EG
Sbjct: 253 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTY------------NVLINGICKEG 300
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS--LRHS-KPLE 432
+++EA+ + NM G + + +C+ GRW DA EK+ S LR P
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDA----EKLLSDMLRKGCSPSV 356
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+TF LI G + I I + M H C PN + N +L + + +A E +
Sbjct: 357 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 416
Query: 492 TTRAN--------SSGYTFLSGDG--------------APLKPDEYTYSSMLEASATAHQ 529
++ T L DG P TY+++++ + +
Sbjct: 417 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 476
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
E + M G + D ++ L+ SR GK F L G P+ + +
Sbjct: 477 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNS 536
Query: 590 MLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEK----LLNAL 645
+++ ++A+ + M TE +T L E I+ + L K LLN L
Sbjct: 537 IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEG----IAYEGLAKEALDLLNEL 592
Query: 646 CN 647
C+
Sbjct: 593 CS 594
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 130/343 (37%), Gaps = 46/343 (13%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-----LLKV 366
PD++ +++ + K WV + L +SG P TY + + Y + L+V
Sbjct: 147 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 206
Query: 367 L---------------VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
L +R + GK+ +A+ + Q+ Y L C
Sbjct: 207 LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESG 266
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
AM +++++++ + SKP +T+ LI G +D+ I +M + C+PN+ T N
Sbjct: 267 VGQAMKLLDEMRN-KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHN 325
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSG--------YTFLSGDG-----------APL- 510
+L+ + A++L + R S FL G P+
Sbjct: 326 IILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH 385
Query: 511 --KPDEYTYSSMLEASATAHQWE-YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
P+ +Y+ +L + + EY+ M GC D + LL + GK +
Sbjct: 386 GCTPNSLSYNPLLHGFCKEKKMDRAIEYL-DIMVSRGCYPDIVTYNTLLTALCKDGKVDV 444
Query: 568 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ L G P + + ++ E+A+ L++ M
Sbjct: 445 AVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM 487
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 186/432 (43%), Gaps = 64/432 (14%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VLV+ + E+ +T + F + +S L+ T+ ++ L+KGL D G W +A+ + +W+
Sbjct: 110 VLVNSIVEQPLTGLSRFFDSV--KSELLRTD--LVSLVKGLDDSGHWERAVFLFEWLVLS 165
Query: 220 KDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQV 277
+ LK V + ILG+ + A ++ + + L++ L D+ AY ++ +
Sbjct: 166 SNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLL--DVRAYTTILHAYSRT 223
Query: 278 GLLKELVKLIERMRQ-KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP-SHQWKGVFW 335
G ++ + L ERM++ PS P LV YN +L+ W+ +
Sbjct: 224 GKYEKAIDLFERMKEMGPS----------------PTLVTYNVILDVFGKMGRSWRKILG 267
Query: 336 VFKQLRKSGLK----------PSAATYGLAMES------YRRC-------LLKVLVRAFW 372
V ++R GLK + A GL E+ + C L++ F
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
+ G EA++ ++ ME+ + Y EL G ++A V+E + + P
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTK-KGVMPNA 386
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
IT+T +I + G D+ + +F MK+ C PN T NA+L + + S++ E+ +
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKK---SRSNEMIKM 443
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
S+G + P+ T+++ML ++ V++ M G + D+
Sbjct: 444 LCDMKSNGCS----------PNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 552 HAWLLVEASRAG 563
L+ R G
Sbjct: 494 FNTLISAYGRCG 505
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 184/459 (40%), Gaps = 63/459 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M S + T +L + +G SWR+ + VLD + K D F + +L+ +
Sbjct: 239 MGPSPTLVTYNVILDVFGKMGR--SWRKILGVLDEMRSKGLKFD---EFTCSTVLSACAR 293
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G EA F L+ C P Y+++ G+ G+ E + +++ M +
Sbjct: 294 EGLLREAKEFFA-ELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE-------- 344
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
N P D V YN ++ A V + K V + + K G+ P+A TY
Sbjct: 345 ----NSCPA---DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITY-------- 389
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
++ A+ + GK +EA+ +M++ G V Y + L R + + ++
Sbjct: 390 ----TTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLC 445
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC--EPNIGTVNAMLKVYSR 478
+KS P T+ ++ + G +F+ MK C EP+ T N ++ Y R
Sbjct: 446 DMKS-NGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKS-CGFEPDRDTFNTLISAYGR 503
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
A +++ E TRA + TY+++L A A W E V
Sbjct: 504 CGSEVDASKMYGEMTRAGFNACV-------------TTYNALLNALARKGDWRSGENVIS 550
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
M G + +T ++ +L ++ G +L ++ ++ G+I F + ML++ ++ +
Sbjct: 551 DMKSKGFKPTETSYSLMLQCYAKGGN-YLGIERIENRIKEGQI----FPSWMLLRTLLLA 605
Query: 599 NY--------EKAVALINAMAYAPFHITERQWTELFESN 629
N+ E+A L Y P + +F N
Sbjct: 606 NFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRN 644
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 162/409 (39%), Gaps = 46/409 (11%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G ++A V++ + K + + YT ++ GKAG+ EAL++F M ++ P+
Sbjct: 365 GFSKEAAGVIEM---MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPN 420
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
Y++V LG+ E++K++ M+ P+ +N +L
Sbjct: 421 TCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGC---------------SPNRATWNTMLAL 465
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
C K V VF++++ G +P T+ + +Y RC +V + E
Sbjct: 466 CGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGE--------- 516
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 443
M + G + Y L L G W+ V+ +KS + KP E +++ ++
Sbjct: 517 ---MTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKS-KGFKPTETSYSLMLQCYA 572
Query: 444 DGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
GG+ I +K+ P+ + +L + + ++ F T GY
Sbjct: 573 KGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAF---TLFKKHGY-- 627
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
KPD ++SML + ++ E + + + G D + L+ R
Sbjct: 628 --------KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRR 679
Query: 563 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
G+C E +L ++ P + + ++ + ++AV +++ M
Sbjct: 680 GECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMT 728
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/435 (17%), Positives = 164/435 (37%), Gaps = 70/435 (16%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
+ +M + G+M ++ G G +A+ + Y +K+ + + Y +L++
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF---YSMKEAGCVPNTCTYNAVLSL 430
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ----- 292
LGK R +E +++ M + P+ A ++++ G G+ K + ++ M+
Sbjct: 431 LGKKSRSNEMIKMLCDMKSN-GCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEP 489
Query: 293 -------------------KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
SK M R ++ + YNA+LNA W+
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACV----TTYNALLNALARKGDWRSG 545
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRR-----------------------CLLKVLVRA 370
V ++ G KP+ +Y L ++ Y + LL+ L+ A
Sbjct: 546 ENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLA 605
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
++ + + A ++ G ++ + N + A ++E I+ S
Sbjct: 606 NFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPD 665
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
L +T+ L+ + G I + + K +P++ + N ++K + R + +A +
Sbjct: 666 L-VTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRML 724
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
E T ++P +TY++ + + E V + MA + C+ ++
Sbjct: 725 SEMTERG-------------IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNE 771
Query: 550 TKHAWLLVEASRAGK 564
++ RAGK
Sbjct: 772 LTFKMVVDGYCRAGK 786
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 119/295 (40%), Gaps = 35/295 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L KG WR +V+ +K K + Y+ +L K G RI N +
Sbjct: 532 LLNALARKGDWRSGENVIS---DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ-KPSKRIKNMHRKNWDPVLEPDL 314
E ++P LL+ L+ + R S+R + +K+ +PD+
Sbjct: 589 EG-QIFPSWM-------------LLRTLLLANFKCRALAGSERAFTLFKKHG---YKPDM 631
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V++N++L+ ++ + + + +R+ GL P TY M+ Y R
Sbjct: 632 VIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR------------R 679
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
G+ +A ++ +E+ + Y + C G Q+A+ ++ ++ R +P T
Sbjct: 680 GECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTE-RGIRPCIFT 738
Query: 435 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
+ + G + + + M K+ C PN T ++ Y R +S+A +
Sbjct: 739 YNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDF 793
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 190/477 (39%), Gaps = 62/477 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL G +A V++ L+D + Y L++ K G AL++ + M
Sbjct: 151 LIRGLCKTGKTWKATRVMEI---LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM- 206
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ PD+ Y+++ TL G LKE +++++R M R+ + PD++
Sbjct: 207 ---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDR----------QMQRECY-----PDVI 248
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y ++ A + ++R G KP TY VL+ +EG
Sbjct: 249 TYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY------------NVLINGICKEG 296
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEIT 434
+++EA+ + +M G + + +C+ GRW DA + E I+ + P +T
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIR--KGCSPSVVT 354
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
F LI G I I + + M H C PN + N +L ++ +A E +
Sbjct: 355 FNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMV 414
Query: 494 RAN--------SSGYTFLSGDG--------------APLKPDEYTYSSMLEASATAHQWE 531
++ T L DG P TY+++++ + + +
Sbjct: 415 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTD 474
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ M G + D ++ L+ SR GK F L E G P+ + + ++
Sbjct: 475 DAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIM 534
Query: 592 IQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES-NEDRISRDKLEKLLNALCN 647
+ +A+ + M TE + L E + ++++ LE LLN LC+
Sbjct: 535 LGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALE-LLNELCS 590
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 119/305 (39%), Gaps = 38/305 (12%)
Query: 312 PDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
PD++ +++ C WK V + L SG P TY VL+
Sbjct: 143 PDIIACTSLIRGLCKTGKTWKAT-RVMEILEDSGAVPDVITY------------NVLISG 189
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ + G+I +A++ +++ V Y + LC++G+ ++AM V+++ + R P
Sbjct: 190 YCKTGEIG---SALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDR-QMQRECYP 245
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
IT+T LI ++ + + + M+D C+P++ T N ++ + +A
Sbjct: 246 DVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFL 305
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
+P+ T++ +L + + +W E M GC
Sbjct: 306 NHMPSYGC-------------QPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSV 352
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
L+ R G L+ A D L + G P+ L + +L E+A+
Sbjct: 353 VTFNILINFLCRKG---LIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEY 409
Query: 607 INAMA 611
++ M
Sbjct: 410 LDIMV 414
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 157/389 (40%), Gaps = 64/389 (16%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
EA+ VL DR +RE + ++ + GQ +KLL + DKG ++
Sbjct: 230 EAMEVL-DRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVL 288
Query: 216 VYGL--KDKRDLKSRFV--------------YTKLLAILGKAGRPHEALRIFNLML-EDC 258
+ G+ + + D RF+ + +L + GR +A + M+ + C
Sbjct: 289 INGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGC 348
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
+ P + ++ + L + GL+ + ++E+M Q P+ + YN
Sbjct: 349 S--PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCT---------------PNSLSYN 391
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKIN 378
+L+A + + + G P TY L+ A ++GK++
Sbjct: 392 PLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTY------------NTLLTALCKDGKVD 439
Query: 379 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
AV + + +G Y + L G+ DA+ +++++K + KP IT++ L
Sbjct: 440 VAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKG-KGLKPDIITYSTL 498
Query: 439 IISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA-N 496
+ G +D+ I+ F +++ +PN T N+++ KA+ +T RA +
Sbjct: 499 VGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIML------GLCKAR----QTVRAID 548
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
Y G KP E +Y ++E A
Sbjct: 549 FLAYMVARG----CKPTETSYMILIEGLA 573
>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 669
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 177/433 (40%), Gaps = 66/433 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y +L L A + +A + M+ + N +P+ + + + Q GLL V+L+E
Sbjct: 211 YTYNTVLKGLCGAKQWEKAEELMEEMIRN-NCHPNEVTFATQIRSFCQNGLLDHAVQLLE 269
Query: 289 RMRQ---KPSKRIKNMHRKNWDP--------------VLEPDLVVYNAVLNACVPSHQWK 331
RM + P I + + + +P+ V YNA L + +WK
Sbjct: 270 RMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTMLCKPNTVCYNAALKGLCMAERWK 329
Query: 332 GVFWVFKQLRKSGLKPSAATYGL-------------AMESYRR----------CLLKVLV 368
V + ++ + P+ AT+ + AME + + L+
Sbjct: 330 DVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLI 389
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRH 427
F E+G++++A+ + +M + ++ + A LC RW D ++ ++ LR
Sbjct: 390 NYFSEQGRVDDALMLLDSM----LCNPDTISFNAALKALCRTERWYDVEELIAQM--LRE 443
Query: 428 SKPL-EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
PL E+TF LI S G ++ I +F+ M K C P+I T ++++ +S + A
Sbjct: 444 DCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESA 503
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
ELF+ P KPD ++Y+++L+ A +WE + MA C
Sbjct: 504 IELFQSM----------------PCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDC 547
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
++ L+ + G F + E G P + ++ Q + A+
Sbjct: 548 PPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALN 607
Query: 606 LINAMAYAPFHIT 618
L++ M+ P I+
Sbjct: 608 LLSTMSCKPDAIS 620
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 145/366 (39%), Gaps = 55/366 (15%)
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALR 249
E L L G AM V++ + + D+ +Y L+ + GR +AL
Sbjct: 347 EATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDV---VIYNTLINYFSEQGRVDDALM 403
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
+ + ML CN PD ++++ L + ++ +LI +M ++ P+
Sbjct: 404 LLDSML--CN--PDTISFNAALKALCRTERWYDVEELIAQMLREDC------------PL 447
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+E + +N ++++ VF+Q+ K P TY L+
Sbjct: 448 IE---MTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTY------------SSLIN 492
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
F E+G + A+ ++M + + + Y + LC RW+DA ++ + + +
Sbjct: 493 GFSEQGLVESAIELFQSMPCKPDIFS---YNAVLKGLCRAARWEDAGELIANM-ARKDCP 548
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P EITF LI S G D I +F+ M ++ P+I T NA++ +S A L
Sbjct: 549 PNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNL 608
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+ KPD +Y+S L+ A +W+ E + M C +
Sbjct: 609 LSTMS----------------CKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPN 652
Query: 549 QTKHAW 554
+ +
Sbjct: 653 EVTFKY 658
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 127/334 (38%), Gaps = 54/334 (16%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-------- 361
+ PD YN VL + QW+ + +++ ++ P+ T+ + S+ +
Sbjct: 206 VAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAV 265
Query: 362 ---------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-C 405
+ LV F E+G++++A+ + M + +V Y A
Sbjct: 266 QLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTM----LCKPNTVCYNAALKG 321
Query: 406 LCNNGRWQD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 463
LC RW+D L+ E ++ + P E TF+ L G +D + + + M+ + C
Sbjct: 322 LCMAERWKDVGELIAEMVR--KDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCR 379
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
P++ N ++ +S A L D PD ++++ L+A
Sbjct: 380 PDVVIYNTLINYFSEQGRVDDALMLL----------------DSMLCNPDTISFNAALKA 423
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGE 580
+W E + M C L + L+ + G L+ HA F+ + +
Sbjct: 424 LCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHG---LVNHAIEVFEQMPKYRC 480
Query: 581 IPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAP 614
P + ++ ++ Q E A+ L +M P
Sbjct: 481 TPDIVTYSSLINGFSEQGLVESAIELFQSMPCKP 514
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 85/212 (40%), Gaps = 24/212 (11%)
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPN 465
LC + R DA V++ +K + ++ L+ G + D + + K N
Sbjct: 120 LCAHRRLADAERVLDALKESGSAD--AVSHNTLVAGYCRDGRLADAERVLEAAKVSGAAN 177
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T A++ Y R+ + A L P+ PD YTY+++L+
Sbjct: 178 VVTYTALINGYCRSGRLADALNLIASM----------------PVAPDTYTYNTVLKGLC 221
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIP 582
A QWE E + + M + C ++ A + + G LL+HA + + G P
Sbjct: 222 GAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNG---LLDHAVQLLERMPRYGCTP 278
Query: 583 HPLFFTEMLIQAIVQSNYEKAVALINAMAYAP 614
+ ++ ++ Q + A+ L+N M P
Sbjct: 279 DVVIYSTLVNGFSEQGRVDDALVLLNTMLCKP 310
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 100/268 (37%), Gaps = 26/268 (9%)
Query: 93 FRQLASESKEFAGDNLKRENLRELKEMFEKDLNWVLDDDVQLGSDYFAKNV-EWHPEKRW 151
+ L + + + L + LRE + E N ++D Q G A V E P+ R
Sbjct: 421 LKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRC 480
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
+ L++ SE+ + + + M +F+ +LKGL W A
Sbjct: 481 TPDIVTYSSLINGFSEQGLVESAIELFQSMPCKPDIFSYN---AVLKGLCRAARWEDAG- 536
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
+ + + K + + L+ L + G A+ +F M E PDI Y+++
Sbjct: 537 --ELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEY-GSTPDIFTYNALI 593
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
+ G L + + L+ M KP D + YN+ L + +WK
Sbjct: 594 NGFSEQGRLDDALNLLSTMSCKP------------------DAISYNSTLKGLCRAERWK 635
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMESY 359
+ ++ + P+ T+ A + +
Sbjct: 636 EAEEIVAEMLRKKCPPNEVTFKYANQLF 663
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 141/330 (42%), Gaps = 48/330 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL + G W +L + G + + ++ L+ + K G+ EA ++N M+
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIG---RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD Y+S+ + L E ++ + M K EPD+V
Sbjct: 343 TR-GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC---------------EPDIV 386
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y+ ++N+ + + +F+++ GL P+ TY LV F + G
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY------------NTLVLGFCQSG 434
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
K+N A + M RGV + Y L LC+NG A+ + EK++ R + L I
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT--LGIGI 492
Query: 436 TGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+II M + +DD S+F + D +P++ T N M+ + S+A LF +
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK-- 550
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+ DG PD++TY+ ++ A
Sbjct: 551 ---------MKEDGC--TPDDFTYNILIRA 569
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/370 (19%), Positives = 151/370 (40%), Gaps = 43/370 (11%)
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
GR EA+ + + M+E PD+ ++ L G + E + LI+RM +
Sbjct: 154 GRVSEAVALVDRMVE-MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG------- 205
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
+PD V Y VLN S +F+++ + +K S Y + ++S
Sbjct: 206 --------FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS--- 254
Query: 362 CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
++G ++A++ ME +G+ Y L LCN+G+W D ++ +
Sbjct: 255 ---------LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 305
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 480
+ R+ P +TF+ LI + G + + ++ M P+ T N+++ + + +
Sbjct: 306 MIG-RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
+A ++F+ +PD TYS ++ + A + + +++ +
Sbjct: 365 CLHEANQMFDLMVSKGC-------------EPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 600
+ G + + L++ ++GK + + F ++ G P + + +L
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471
Query: 601 EKAVALINAM 610
KA+ + M
Sbjct: 472 NKALEIFEKM 481
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/398 (18%), Positives = 156/398 (39%), Gaps = 48/398 (12%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++RL + +A R M + + + Q ++ L GS+ A+S+ + +
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM---- 271
Query: 221 DKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ + +K+ V Y+ L+ L G+ + ++ M+ N+ PD+ + ++ + G
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVVTFSALIDVFVKEGK 330
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L E +L M + + PD + YN++++ + +F
Sbjct: 331 LLEAKELYNEMITRG---------------IAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ G +P TY +L+ ++ + ++++ + R + +G++ Y
Sbjct: 376 MVSKGCEPDIVTY------------SILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 458
L C +G+ A + +++ S R P +T+ L+ D G ++ + IF+ M
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVS-RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 459 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
K IG N ++ A LF LS G +KPD TY+
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLF-----------CSLSDKG--VKPDVVTYN 529
Query: 519 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
M+ + +++ M GC D + L+
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 131/320 (40%), Gaps = 48/320 (15%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+E D+ ++N + F V + K G +P T+ LV
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITF------------STLVN 148
Query: 370 AFWEEGKINEAVAAVR---NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
F EG+++EAVA V M+QR + T S L LC GR +A+++++++
Sbjct: 149 GFCLEGRVSEAVALVDRMVEMKQRPDLVTVST---LINGLCLKGRVSEALVLIDRMVEYG 205
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKA 485
+P E+T+ ++ G+ + +F+ M++ + + ++ + ++ ++ F A
Sbjct: 206 F-QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 486 KELFEET----TRANSSGYTFLSG---------DGAPL---------KPDEYTYSSMLEA 523
LF E +A+ Y+ L G DGA + PD T+S++++
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
+ + +Y M G D + L+ + H FD ++ G P
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP- 383
Query: 584 PLFFTEMLIQAIVQSNYEKA 603
+++ +I+ ++Y KA
Sbjct: 384 -----DIVTYSILINSYCKA 398
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 173/406 (42%), Gaps = 66/406 (16%)
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
+ G D + ++SR TK++ IL K+G+P EA+ IF ++E + P +A Y ++ L
Sbjct: 62 FCMGKNDCQIVRSR---TKVMNILIKSGKPQEAIVIFQNLIEGGH-QPSLATYTTLLNAL 117
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
K + ++ + +K ++PD + +NA++NA S +
Sbjct: 118 TTQKYFKPIHSIVSLVEEKQ---------------MKPDSIFFNALINAFAESGNMEDAK 162
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRC------------------------LLKVLVRA 370
V +++++SGLKPSA TY ++ Y +L+RA
Sbjct: 163 KVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIRA 222
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-K 429
+ I+EA V M G+ + +A NG+ A ++ +++ R+S K
Sbjct: 223 LCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQ--RNSLK 280
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSR---NDMFSKA 485
P E T T +I G + + + MKD +PN+ +N+++ + D +
Sbjct: 281 PNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEV 340
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+L EE ++PD TYS+++ A + A E + +Y M SG
Sbjct: 341 LKLMEEFQ----------------IRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGV 384
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ D ++ L RA + E + ++G P+ + FT ++
Sbjct: 385 KPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVI 430
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/432 (18%), Positives = 166/432 (38%), Gaps = 82/432 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ + G+ A V V +K+ S Y L+ G AG+P E++++ +LM
Sbjct: 148 LINAFAESGNMEDAKKV---VQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMS 204
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N+ P++ Y+ + L ++ + E ++ +M ++PD+V
Sbjct: 205 TEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASG---------------MQPDVV 249
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+N + A + + + +++++ LKP+ R C +++ + EG
Sbjct: 250 TFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNE----------RTC--TIIISGYCREG 297
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
K+ EA+ V M+ G+ Q ++V+ +
Sbjct: 298 KVQEALRFVYRMKDLGM--------------------QPNLIVLN-------------SL 324
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
+ MD +D+ + + + + P++ T + ++ +S+ K KE++ ++
Sbjct: 325 VNGFVDMMDRDGVDEVLKLMEEFQ--IRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKS 382
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
+KPD + YS + + A + E E + M SG + +
Sbjct: 383 G-------------VKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTV 429
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE-KAVALINAMAYAP 614
+ G+ FD + E G P+ F E LI ++ KA ++ M
Sbjct: 430 ISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTF-ETLIWGYAEAKQPWKAEGMLQIM--EE 486
Query: 615 FHITERQWTELF 626
FH+ ++ T L
Sbjct: 487 FHVQPKKSTILL 498
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 145/354 (40%), Gaps = 43/354 (12%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
EK+ + ++ L++ +E K V+ M +SGL + L+KG G G
Sbjct: 135 EKQMKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPD 194
Query: 208 QAMSVLDWVYGLKD-KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++M +LD + + K +LK+ Y L+ L K EA + M + PD+
Sbjct: 195 ESMKLLDLMSTEGNVKPNLKT---YNMLIRALCKMENISEAWNVVYKMTAS-GMQPDVVT 250
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKNW----------------- 306
++++A Q G + +I M++ KP++R + +
Sbjct: 251 FNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMK 310
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
D ++P+L+V N+++N V GV V K + + ++P TY M ++ +
Sbjct: 311 DLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQA---- 366
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA--MLVVEKIKS 424
F E+ K NM + GV A Y LA + A ML V KS
Sbjct: 367 ---GFLEKCK-----EIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTV-MTKS 417
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 477
H P + FT +I G +D+ + +F M + PN+ T ++ Y+
Sbjct: 418 GVH--PNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYA 469
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 159/397 (40%), Gaps = 47/397 (11%)
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
E V LI+RM K +PDLV Y V+N F + ++
Sbjct: 204 EAVALIDRMVAKGC---------------QPDLVTYGVVVNGLCKRGDTDLAFILLNKME 248
Query: 342 KSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
+ L+P Y ++ + +++A+ + ME +G+ Y
Sbjct: 249 QGKLEPGVLIY------------TTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KD 460
L CLCN GRW DA ++ + R P TF+ LI + + G + + ++ M K
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 461 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 520
+P+I T ++++ + +D +AK++FE S + F PD +YS++
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV----SKHCF---------PDVVSYSTL 402
Query: 521 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 580
++ A + + +++ M+ G + + L+ +AG C + + F ++ G
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 581 IPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEK 640
P+ + + +L EKA+ + + + T + + E K+E
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG---MCKAGKVED 519
Query: 641 LLNALCNCNAASSEITVSNLSRALHALCR--SEKERD 675
+ CN + + V + + CR S++E D
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 151/411 (36%), Gaps = 89/411 (21%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+YT ++ L K +AL +F M E + P++ Y S+ L G + +L+
Sbjct: 257 LIYTTIIDGLCKNKHMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M + RK + PD+ ++A+++A V + ++ ++ K + PS
Sbjct: 316 DM----------IERK-----INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 349 AATYGLAMESY------------------RRCLLKV-----LVRAFWEEGKINEAVAAVR 385
TY + + + C V L++ F + +++E + R
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFR 420
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M QRG+VG +T+T LI
Sbjct: 421 EMSQRGLVGNT------------------------------------VTYTTLIQGLFQA 444
Query: 446 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G D IF+ M D PNI T N +L +N KA +FE R+
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-------- 496
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
++P YTY+ M+E A + E ++ ++L G + D + ++ R G
Sbjct: 497 -----MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
+ F + E G +P+ + ++ + + E + LI M F
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/312 (19%), Positives = 126/312 (40%), Gaps = 37/312 (11%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
EP++V +++LN S + + Q+ +G +P+ T+ L+
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF------------NTLIHG 195
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ K +EAVA + M +G Y + LC G A +++ K++ + +P
Sbjct: 196 LFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKL-EP 254
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+ +T +I H+DD +++F+ M+ PN+ T ++++ +S A L
Sbjct: 255 GVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314
Query: 490 EETT--RANSSGYTFLSGDGAPLK--------------------PDEYTYSSMLEASATA 527
+ + N +TF + A +K P TYSS++
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
+ + + +++ M C D ++ L+ +A + F + + G + + + +
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 588 TEMLIQAIVQSN 599
T LIQ + Q+
Sbjct: 435 TT-LIQGLFQAG 445
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 168/399 (42%), Gaps = 57/399 (14%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
L+ ++ TKL+ L G+PHEA +FN + E+ + P + Y ++ L
Sbjct: 13 LRGNNSCQTVHARTKLMNTLIGKGKPHEAQAVFNNLTEEGH-KPTLITYTTLVAAL---- 67
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
RQK K I + K D ++PD ++ NA++NA S + +F+
Sbjct: 68 -----------TRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSESGKVDEAMKIFQ 116
Query: 339 QLRKSGLKPSAATY-------GLAMESYRRCLL-----------------KVLVRAFWEE 374
++++ G KP+ +TY G+A Y L +L++A+ +
Sbjct: 117 KMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTK 176
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
K+ EA + M G+ Y +A NG + A ++ K+ KP E T
Sbjct: 177 KKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKM-PYNIVKPNERT 235
Query: 435 FTGLIISS-MDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
G+IIS G++ + + MK+ +PN N+++K Y +T
Sbjct: 236 -CGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYL-------------DT 281
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
T N + +KPD T+S+++ A ++A E E ++ M +G + D +
Sbjct: 282 TDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAY 341
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L RAG+ E S+ + G P+ + FT ++
Sbjct: 342 SILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTII 380
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 130/306 (42%), Gaps = 44/306 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
++ + G +AM + + YG K Y L+ G AGRP+E++++ +
Sbjct: 98 MINAFSESGKVDEAMKIFQKMKEYGCKPTTS-----TYNTLIKGFGIAGRPYESMKLLEM 152
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M +D N+ P+ Y+ + L+E ++ +M ++PD
Sbjct: 153 MGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASG---------------IQPD 197
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
+V YN + A + + + + ++ + +KP+ T G +++ + +
Sbjct: 198 VVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCG------------IIISGYCK 245
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN----NGRWQDAMLVVEKIKSLRHSK 429
EG + EA+ + M++ GV V+ L + NG +A+ ++E+ K
Sbjct: 246 EGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNG-VDEALTLMEEF----GIK 300
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P +TF+ ++ + G +++C IF M K EP+I + + K Y R KA+ L
Sbjct: 301 PDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEAL 360
Query: 489 FEETTR 494
++
Sbjct: 361 LTSMSK 366
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 127/325 (39%), Gaps = 47/325 (14%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
+ +++ SE + K + M + G T L+KG G G ++M +L+ +
Sbjct: 95 LNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMG 154
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+D+ + Y L+ + EA + + M+ + PD+ Y+++A Q
Sbjct: 155 --QDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVAS-GIQPDVVTYNTMARAYAQN 211
Query: 278 GLLKELVKLIERMRQ---KPSKR-----IKNMHRKNWDP------------VLEPDLVVY 317
G + +LI +M KP++R I ++ P ++P+ VV+
Sbjct: 212 GETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVF 271
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL------------- 364
N+++ + + GV + + G+KP T+ M ++ L
Sbjct: 272 NSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVK 331
Query: 365 ----------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
+L + + G+ +A A + +M + GV ++ + C G+
Sbjct: 332 AGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDR 391
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLI 439
A + EK+ + S L+ T+ LI
Sbjct: 392 AFRLCEKMHEMGTSPNLK-TYETLI 415
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 190/479 (39%), Gaps = 66/479 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G G ++A V++ L+ + Y L++ K+G AL++ + M
Sbjct: 98 LIRGFCRIGKTKKATWVMEI---LEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM- 153
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
N+ PD+ Y+++ TL G LK+ +++++R QK PD++
Sbjct: 154 ---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECY---------------PDVI 195
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y ++ A + ++R G KP TY VL+ +EG
Sbjct: 196 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTY------------NVLINGICKEG 243
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS--LRHS-KPLE 432
+++EA+ + NM G + + +C+ GRW DA EK+ S LR P
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDA----EKLLSDMLRKGCSPSV 299
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+TF LI G + I I + M H C PN + N +L + + +A E +
Sbjct: 300 VTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDI 359
Query: 492 TTRAN--------SSGYTFLSGDG--------------APLKPDEYTYSSMLEASATAHQ 529
++ T L DG P TY+++++ + +
Sbjct: 360 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGK 419
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
E + M G + D ++ L+ SR GK F L G P+ + +
Sbjct: 420 TERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNS 479
Query: 590 MLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES-NEDRISRDKLEKLLNALCN 647
+++ ++A+ + M TE +T L E + ++++ L+ LLN LC+
Sbjct: 480 IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALD-LLNELCS 537
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 130/343 (37%), Gaps = 46/343 (13%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-----LLKV 366
PD++ +++ + K WV + L +SG P TY + + Y + L+V
Sbjct: 90 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 149
Query: 367 L---------------VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
L +R + GK+ +A+ + Q+ Y L C
Sbjct: 150 LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESG 209
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
AM +++++++ + SKP +T+ LI G +D+ I +M + C+PN+ T N
Sbjct: 210 VGQAMKLLDEMRN-KGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHN 268
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSG--------YTFLSGDG-----------APL- 510
+L+ + A++L + R S FL G P+
Sbjct: 269 IILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH 328
Query: 511 --KPDEYTYSSMLEASATAHQWE-YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
P+ +Y+ +L + + EY+ M GC D + LL + GK +
Sbjct: 329 GCTPNSLSYNPLLHGFCKEKKMDRAIEYL-DIMVSRGCYPDIVTYNTLLTALCKDGKVDV 387
Query: 568 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ L G P + + ++ E+A+ L++ M
Sbjct: 388 AVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEM 430
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/419 (20%), Positives = 175/419 (41%), Gaps = 48/419 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF--VYTKLLAILGKAGRPHEALRIFNL 253
+++ LG G W + + DW + +++L+S++ V + +++ LG+ GR A IF+
Sbjct: 89 IVRELGHSGQWEKVVKSFDW---MVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDR 145
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
+ ++ Y S+ G+ G L + V++ E M+ V +P+
Sbjct: 146 AV-GAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV----------------VCKPN 188
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
LVVYNAV++AC + +F+++ + G+ P T+ L+ A
Sbjct: 189 LVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITF------------NTLISAAGR 236
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
+ E ME+RG+ Y L C G+ ++E + +P I
Sbjct: 237 ANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVI 296
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T++ +I G + I++FQ M++ + EP+ N M+ +++R F +A +
Sbjct: 297 TYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAM 356
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
A D TY+++L++ ++ + + M G + +
Sbjct: 357 EEAG-------------FAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTY 403
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ L+ + G F + +AG P + ++ ++ + ++A+AL+ MA
Sbjct: 404 SALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMA 462
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 22/157 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y ++ I + G EA I M E+ DI Y+++ + G+ G +E + L+E
Sbjct: 331 ICYNTMVDIHARLGNFDEAHSIRRAM-EEAGFAKDIVTYNALLDSYGKQGKFREAMSLLE 389
Query: 289 RMRQK-PSKRI------------KNMHRKNW-------DPVLEPDLVVYNAVLNACVPSH 328
M+Q+ S I HR L+PD+V+Y+ +++ C +
Sbjct: 390 EMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNG 449
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESY-RRCLL 364
+ +++ +G++P+ TY +++Y R+CL+
Sbjct: 450 SPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLM 486
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 124/581 (21%), Positives = 233/581 (40%), Gaps = 100/581 (17%)
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
R EA R+ L REM+ + N G +T G + LL G WR+A++
Sbjct: 240 RVFLEADRLDTAYLVHREMSDSGF------NMDG--YTLGCFVHLL---CKAGRWREALA 288
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
+++ K++ L + +YT++++ L +A EA+ + M + P++ Y +
Sbjct: 289 LIE-----KEEFKLDT-VIYTQMISGLCEASLFEEAMDFLSRM-RSSSCIPNVVTYRILL 341
Query: 272 VTL---GQVGLLKELVKLIERMRQKPSKRIKN-----------------MHRKNWDPVLE 311
Q+G K ++ ++ PS+RI N + +K D +
Sbjct: 342 CGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQ 401
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY---RRCLLKVLV 368
P VVYN ++ + + + L+ + YG ++++ + + L
Sbjct: 402 PGYVVYNILIGGICGNEKLPSL---------DVLELAEKAYGEMLDAHVVLNKVNVSNLA 452
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
R GK +A + +R M +G + S Y ++ LCN + +A L+ E++KS H
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKS-NHV 511
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
P T+T LI S G + F M +D C PN+ T A++ Y + S A E
Sbjct: 512 VPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANE 571
Query: 488 LFE----ETTRANSSGYTFL------SG----------------------------DGAP 509
LFE E N YT L SG DG
Sbjct: 572 LFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNI 631
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
P+ +TY ++++ AH+ + + M++ GC+ + + L+ + GK +
Sbjct: 632 RDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691
Query: 570 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELF 626
F + E G P+ ++ ++ + + A+ +++ M + AP I +TE+
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII---YTEMI 748
Query: 627 ESNEDRISRDKLEKLLNAL----CNCNAASSEITVSNLSRA 663
+ D+ +L++ + C+ N + + +A
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKA 789
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 113/313 (36%), Gaps = 52/313 (16%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N ++ C + W +L+ G KPS TY LVR F E ++
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTY------------NALVRVFLEADRL 248
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELAC---CLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
+ A R M G Y L C LC GRW++A+ ++EK K +
Sbjct: 249 DTAYLVHREMSDSGFNMDG---YTLGCFVHLLCKAGRWREALALIEK----EEFKLDTVI 301
Query: 435 FTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+T +I + ++ + M+ C PN+ T +L R + K +
Sbjct: 302 YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRIL---- 357
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
+ + +G P ++S++ A + + Y + K M GCQ +
Sbjct: 358 -------SMMITEGC--YPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYN 408
Query: 554 WLLVEASRAGKC-----------HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
L+ G C L E A+ +L+A + + + + + +EK
Sbjct: 409 ILI-----GGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEK 463
Query: 603 AVALINAMAYAPF 615
A ++I M F
Sbjct: 464 AYSIIREMMSKGF 476
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 16/133 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+YT+++ L K G+ EA R+ + M+E+ +P++ Y ++ G+ G ++ K +E
Sbjct: 742 IIYTEMIDGLCKVGKTDEAYRLMS-MMEEKGCHPNVVTYTAMIDGFGKAG---KVDKCLE 797
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MRQ +K P+ V Y ++N C + + +++++
Sbjct: 798 LMRQMGAKGCA------------PNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845
Query: 349 AATYGLAMESYRR 361
A Y +E + R
Sbjct: 846 MAGYRKVIEGFNR 858
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 124/581 (21%), Positives = 233/581 (40%), Gaps = 100/581 (17%)
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
R EA R+ L REM+ + N G +T G + LL G WR+A++
Sbjct: 240 RVFLEADRLDTAYLVHREMSDSGF------NMDG--YTLGCFVHLL---CKAGRWREALA 288
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
+++ K++ L + +YT++++ L +A EA+ + M + P++ Y +
Sbjct: 289 LIE-----KEEFKLDT-VIYTQMISGLCEASLFEEAMDFLSRM-RSSSCIPNVVTYRILL 341
Query: 272 VTL---GQVGLLKELVKLIERMRQKPSKRIKN-----------------MHRKNWDPVLE 311
Q+G K ++ ++ PS+RI N + +K D +
Sbjct: 342 CGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQ 401
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY---RRCLLKVLV 368
P VVYN ++ + + + L+ + YG ++++ + + L
Sbjct: 402 PGYVVYNILIGGICGNEKLPSL---------DVLELAEKAYGEMLDAHVVLNKVNVSNLA 452
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
R GK +A + +R M +G + S Y ++ LCN + +A L+ E++KS H
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKS-NHV 511
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
P T+T LI S G + F M +D C PN+ T A++ Y + S A E
Sbjct: 512 VPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANE 571
Query: 488 LFE----ETTRANSSGYTFL------SG----------------------------DGAP 509
LFE E N YT L SG DG
Sbjct: 572 LFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNI 631
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
P+ +TY ++++ AH+ + + M++ GC+ + + L+ + GK +
Sbjct: 632 RDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691
Query: 570 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELF 626
F + E G P+ ++ ++ + + A+ +++ M + AP I +TE+
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII---YTEMI 748
Query: 627 ESNEDRISRDKLEKLLNAL----CNCNAASSEITVSNLSRA 663
+ D+ +L++ + C+ N + + +A
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKA 789
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 113/313 (36%), Gaps = 52/313 (16%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N ++ C + W +L+ G KPS TY LVR F E ++
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTY------------NALVRVFLEADRL 248
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELAC---CLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
+ A R M G Y L C LC GRW++A+ ++EK K +
Sbjct: 249 DTAYLVHREMSDSGFNMDG---YTLGCFVHLLCKAGRWREALALIEK----EEFKLDTVI 301
Query: 435 FTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+T +I + ++ + M+ C PN+ T +L R + K +
Sbjct: 302 YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRIL---- 357
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
+ + +G P ++S++ A + + Y + K M GCQ +
Sbjct: 358 -------SMMITEGC--YPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYN 408
Query: 554 WLLVEASRAGKC-----------HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
L+ G C L E A+ +L+A + + + + + +EK
Sbjct: 409 ILI-----GGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEK 463
Query: 603 AVALINAMAYAPF 615
A ++I M F
Sbjct: 464 AYSIIREMMSKGF 476
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 16/133 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+YT+++ L K G+ EA R+ + M+E+ +P++ Y ++ G+ G ++ K +E
Sbjct: 742 IIYTEMIDGLCKVGKTDEAYRLMS-MMEEKGCHPNVVTYTAMIDGFGKAG---KVDKCLE 797
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MRQ +K P+ V Y ++N C + + +++++
Sbjct: 798 LMRQMGAKGCA------------PNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845
Query: 349 AATYGLAMESYRR 361
A Y +E + R
Sbjct: 846 MAGYRKVIEGFNR 858
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 173/400 (43%), Gaps = 71/400 (17%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
D++SR TKL+ L + GRP EA IFN ++E+ + P + Y ++ L + L
Sbjct: 318 DVRSR---TKLMNGLIERGRPQEAHSIFNTLIEEGH-KPSLITYTTLVTALTRQKHFHSL 373
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ LI ++ + L+PD +++NA++NA S +F+++++S
Sbjct: 374 LSLISKVEKNG---------------LKPDTILFNAIINASSESGNLDQAMKIFEKMKES 418
Query: 344 GLKPSAATYGLAMESY--------------------------RRCLLKVLVRAFWEEGKI 377
G KP+A+T+ ++ Y R C +LV+A+ + KI
Sbjct: 419 GCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTC--NILVQAWCNQRKI 476
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITF 435
EA V M+ GV + LA G A ++ I + H+ KP T
Sbjct: 477 EEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI--IPRMLHNKVKPNVRTC 534
Query: 436 TGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVY-SRNDM--FSKAKELFEE 491
++ + G +++ + F MK+ PN+ N+++K + + NDM + +L EE
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE 594
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
+KPD T+S+++ A ++ + E +Y M G D
Sbjct: 595 FG----------------VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHA 638
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L +RAG+ + + + + G P+ + +T+++
Sbjct: 639 FSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQII 678
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 124/581 (21%), Positives = 233/581 (40%), Gaps = 100/581 (17%)
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
R EA R+ L REM+ + N G +T G + LL G WR+A++
Sbjct: 240 RVFLEADRLDTAYLVHREMSDSGF------NMDG--YTLGCFVHLL---CKAGRWREALA 288
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
+++ K++ L + +YT++++ L +A EA+ + M + P++ Y +
Sbjct: 289 LIE-----KEEFKLDT-VIYTQMISGLCEASLFEEAMDFLSRM-RSSSCIPNVVTYRILL 341
Query: 272 VTL---GQVGLLKELVKLIERMRQKPSKRIKN-----------------MHRKNWDPVLE 311
Q+G K ++ ++ PS+RI N + +K D +
Sbjct: 342 CGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQ 401
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY---RRCLLKVLV 368
P VVYN ++ + + + L+ + YG ++++ + + L
Sbjct: 402 PGYVVYNILIGGICGNEKLPSL---------DVLELAEKAYGEMLDAHVVLNKVNVSNLA 452
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
R GK +A + +R M +G + S Y ++ LCN + +A L+ E++KS H
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKS-NHV 511
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
P T+T LI S G + F M +D C PN+ T A++ Y + S A E
Sbjct: 512 VPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANE 571
Query: 488 LFE----ETTRANSSGYTFL------SG----------------------------DGAP 509
LFE E N YT L SG DG
Sbjct: 572 LFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNI 631
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
P+ +TY ++++ AH+ + + M++ GC+ + + L+ + GK +
Sbjct: 632 RDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691
Query: 570 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELF 626
F + E G P+ ++ ++ + + A+ +++ M + AP I +TE+
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII---YTEMI 748
Query: 627 ESNEDRISRDKLEKLLNAL----CNCNAASSEITVSNLSRA 663
+ D+ +L++ + C+ N + + +A
Sbjct: 749 DGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKA 789
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 113/313 (36%), Gaps = 52/313 (16%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N ++ C + W +L+ G KPS TY LVR F E ++
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTY------------NALVRVFLEADRL 248
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELAC---CLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
+ A R M G Y L C LC GRW++A+ ++EK K +
Sbjct: 249 DTAYLVHREMSDSGFNMDG---YTLGCFVHLLCKAGRWREALALIEK----EEFKLDTVI 301
Query: 435 FTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+T +I + ++ + M+ C PN+ T +L R + K +
Sbjct: 302 YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRIL---- 357
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
+ + +G P ++S++ A + + Y + K M GCQ +
Sbjct: 358 -------SMMITEGC--YPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYN 408
Query: 554 WLLVEASRAGKC-----------HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
L+ G C L E A+ +L+A + + + + + +EK
Sbjct: 409 ILI-----GGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEK 463
Query: 603 AVALINAMAYAPF 615
A ++I M F
Sbjct: 464 AYSIIREMMSKGF 476
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 16/133 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+YT+++ L K G+ EA R+ + M+E+ +P++ Y ++ G+ G ++ K +E
Sbjct: 742 IIYTEMIDGLCKVGKTDEAYRLMS-MMEEKGCHPNVVTYTAMIDGFGKAG---KVDKCLE 797
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MRQ +K P+ V Y ++N C + + +++++
Sbjct: 798 LMRQMGAKGCA------------PNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845
Query: 349 AATYGLAMESYRR 361
A Y +E + R
Sbjct: 846 MAGYRKVIEGFNR 858
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 177/429 (41%), Gaps = 89/429 (20%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
LD + +KDK + F YT+ + LGKAGR +A R+F M++D PD+ +S+
Sbjct: 289 LDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKD-GCKPDVVLINSLIN 347
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA---C-VPSH 328
LG+VG L+ +KL +M ++W +P++V YN V+ A C P+
Sbjct: 348 ILGKVGRLEVTLKLFRKM-------------ESWQ--CKPNVVTYNTVIKALFECKAPAS 392
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ W F++++ G+ PS+ TY +L+ F + +I +A+ + M+
Sbjct: 393 E--AASW-FEKMKGCGIAPSSFTYS------------ILIDGFCKTNRIEKALLLLEEMD 437
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
++G + Y C L N+ + K+K + L
Sbjct: 438 EKGFPPCPAAY----CSLINS---------LGKVKRYEAANEL----------------- 467
Query: 449 DDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
F +K++C + V A M+K + + S+A +LF E + S
Sbjct: 468 ------FLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGS---------- 511
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
KPD Y Y++++ A + + + + M +GC D H +L +R G
Sbjct: 512 ---KPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDR 568
Query: 568 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 627
F + + P + + +L +E+A L+ M F +T + E
Sbjct: 569 AIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILE 628
Query: 628 S----NEDR 632
+ +EDR
Sbjct: 629 AVGKVDEDR 637
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 160/380 (42%), Gaps = 48/380 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++KGL +G A V+D ++ ++ + +L L K R +A +F L
Sbjct: 177 IIKGLCKEGEIEAAFRVVDEMFMIESGLS-PDVITFNSVLDGLCKEQRILDAHNVFKRAL 235
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E P++ Y ++ L ++ + E ++L+ +M + + + V
Sbjct: 236 ER-GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCR---------------ANTV 279
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y+ V++ + + + V +Q+R +G P A TY L+ F++
Sbjct: 280 TYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTY------------NTLIDGFFKRQ 327
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
++ EAV +R M + G + Y L LC +GR+ +A+ +++ + + R P IT+
Sbjct: 328 RLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA-RGCAPNAITY 386
Query: 436 TGLIISSMDGGHIDDCISIFQHMK--DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+ ++ G + + + F+ M + P++ +A++ + +A E E
Sbjct: 387 SSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMI 446
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
RA PD T+S ++ A + + +++GMA GC D +A
Sbjct: 447 RAGRI-------------PDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYA 493
Query: 554 WLLVEASRAGKCHLLEHAFD 573
L+ RA + ++ AFD
Sbjct: 494 TLVDRLCRASR---VDEAFD 510
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 88/441 (19%), Positives = 179/441 (40%), Gaps = 53/441 (12%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L K+ + +A+ +F M+ D +YPD+ Y ++ LG+ +KE L E R K
Sbjct: 5 LCKSRKVDKAITLFKQMV-DKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGC-- 61
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR-KSGLKPSAATYGLAM 356
P +V YN +++ + + ++ + G +P+ TY
Sbjct: 62 -------------HPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTY---- 104
Query: 357 ESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
L+ + ++++ + M RG A Y L L GR ++A
Sbjct: 105 --------STLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAF 156
Query: 417 LVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHM---KDHCEPNIGTVNAM 472
++E++ + + P E+ GLII + G I+ + M + P++ T N++
Sbjct: 157 SLLEQMAA--NGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSV 214
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA-SATAHQWE 531
L + A +F+ RA G +P+ TYS++++ S A E
Sbjct: 215 LDGLCKEQRILDAHNVFK---RALERG----------CRPNVVTYSTLIDGLSKMAKMDE 261
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + K + L GC+ + ++ ++ + G+ + +AG +P + + ++
Sbjct: 262 ALQLLAKMVEL-GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLI 320
Query: 592 IQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAA 651
+ +AV L+ M A FH + +T L D+ ++L+ + A
Sbjct: 321 DGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCA 380
Query: 652 SSEITVSNLSRALHALCRSEK 672
+ IT S++ + LC++ +
Sbjct: 381 PNAITYSSI---VDGLCKAGR 398
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 82/198 (41%), Gaps = 27/198 (13%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S YT L L ++GR EA+ I + M P+ Y S+ L + G + E +
Sbjct: 347 SVVTYTTLCHGLCRSGRFDEAVEILDYMAAR-GCAPNAITYSSIVDGLCKAGRVTEALGY 405
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
E+M + D V+ P ++ Y+A+++ + + + +++ ++G
Sbjct: 406 FEKMAR--------------DEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRI 451
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P T+ +L+ + G+I+ + R M +RG V Y L L
Sbjct: 452 PDVVTF------------SILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRL 499
Query: 407 CNNGRWQDAMLVVEKIKS 424
C R +A + ++++S
Sbjct: 500 CRASRVDEAFDLFQQMRS 517
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/456 (20%), Positives = 183/456 (40%), Gaps = 63/456 (13%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
FT G + L LG +A L + G+ + +Y ++ L G EA
Sbjct: 176 FTFGVAARALCRLG------RANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEA 229
Query: 248 LRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK---------- 296
+ N ++L C D+ + V + +G ++E +L++RM K
Sbjct: 230 ATLLNEMLLMGC--AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 287
Query: 297 ------RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R + R V E ++V++N V+ C+ + +++ + G +P A
Sbjct: 288 QGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAH 347
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY +L+ + G+I+ AV +R ME++G Y + C NG
Sbjct: 348 TY------------SILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNG 395
Query: 411 RWQDAMLVVEKIKSLRHSKPLEIT---FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
W D ++E++ + K L + + G+I + G +D+ + + Q M+ C P+I
Sbjct: 396 MWDDTRALLEEMSA----KGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDI 451
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
+ N ++ N+ +A+ +FE + + TY++++ A
Sbjct: 452 CSYNTIIYHLCNNEQMEEAEHMFENLLEEG-------------VVANGITYNTIIHALLR 498
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH----LLEHAFDSLLEAGEIP 582
+W+ + K M L GC LD + L+ + G LLE + ++ +
Sbjct: 499 DGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVS 558
Query: 583 HPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 618
+ + +E+ + V+ E + ++N AP +T
Sbjct: 559 YNILISELCKERRVRDALELSKQMLN-QGLAPDIVT 593
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 90/455 (19%), Positives = 166/455 (36%), Gaps = 60/455 (13%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ F + L + GR +EAL + M PD Y +V L G + E L
Sbjct: 174 TTFTFGVAARALCRLGRANEALALLRGMARH-GCVPDAVLYQTVIHALCDQGGVTEAATL 232
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ M D+ ++ V+ + + + ++ G
Sbjct: 233 LNEMLLMGCA---------------ADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCM 277
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P TYG ++ R VR + +EA A + + + VV +V + CL
Sbjct: 278 PGVMTYGFLLQGLCR------VR------QADEARAMLGRVPELNVVLFNTV---IGGCL 322
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 465
G+ +A + E + L+ +P T++ L+ G I + + + M K PN
Sbjct: 323 AE-GKLAEATELYETM-GLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPN 380
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T +L + +N M+ + L EE + + G T + Y+ M+ A
Sbjct: 381 VVTYTIVLHSFCKNGMWDDTRALLEEMS---AKGLTL----------NSQGYNGMIYALC 427
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+ + + + M GC D + ++ + EH F++LLE G + + +
Sbjct: 428 KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 487
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF-----ESNEDRISRDKLEK 640
+ ++ + ++ AV L M + + L + N DR S LE+
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR-SLVLLEE 546
Query: 641 LLNALCNCNAASSEITVSNLSRALHALCRSEKERD 675
+ N S I +S LC+ + RD
Sbjct: 547 MAEKGIKPNNVSYNILISE-------LCKERRVRD 574
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 167/444 (37%), Gaps = 95/444 (21%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + L+ L GR +AL +F+ ML P + Y + + ++ + L++
Sbjct: 252 FTFNPLIRALCVRGRIPDALAVFDDMLHR-GCSPSVVTYSILLDATCKESGYRQAMALLD 310
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR K EPD+V YN ++NA + L G KP
Sbjct: 311 EMRAKGC---------------EPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPD 355
Query: 349 AATYG------------------LAMESYRRC-----LLKVLVRAFWEEGKINEAVAAVR 385
A TY LA + C +V + ++G ++ A+ V
Sbjct: 356 AVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVD 415
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS--------------------- 424
+M + G V Y + LC+ GR DA+ ++ ++KS
Sbjct: 416 HMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTE 475
Query: 425 -------------LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
P E+TF ++ S G +D I + + M ++ C P+I T N
Sbjct: 476 QWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYN 535
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
++ A EL + S G KPD T++++L+ +W
Sbjct: 536 CIIDGLCNESCIDDAMELLSDL---QSCG----------CKPDIVTFNTLLKGLCGVDRW 582
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGEIPHPLFF 587
E E + M S C D+ ++ + G LL A ++L E G +P+ +
Sbjct: 583 EDAEQLMANMMRSNCPPDELTFNTVITSLCQKG---LLTQAIETLKIMAENGCVPNSSTY 639
Query: 588 TEMLIQAIVQSN-YEKAVALINAM 610
+ +++ A++++ + A+ L++ M
Sbjct: 640 S-IVVDALLKAGKAQAALELLSGM 662
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 166/436 (38%), Gaps = 61/436 (13%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
L+ L +G +A+ + D + R+ L+ L GR +A R+F +
Sbjct: 157 LRSLVQRGEIDEALVLFDSMAS-GGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGP 215
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
+ Y+++ + G +++ +LI M PD
Sbjct: 216 SAT----VVTYNTMVNGYCRAGRIEDARRLINGMP------------------FPPDTFT 253
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES------YRRCL------- 363
+N ++ A + VF + G PS TY + +++ YR+ +
Sbjct: 254 FNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMR 313
Query: 364 ----------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
VL+ A EG ++EA+ + N+ G A Y + LC + RW+
Sbjct: 314 AKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWK 373
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAM 472
+ ++ ++ S + P E+TF ++ S G +D I + HM +H C +I T +++
Sbjct: 374 EVEELLAEMTS-NNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSI 432
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
L A EL +R S G KPD Y+++L+ + QWE
Sbjct: 433 LDGLCDVGRVDDAVELL---SRLKSYG----------CKPDTIAYTTVLKGLCSTEQWER 479
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 592
E + M S C D+ ++ + G + + E G P + + ++
Sbjct: 480 AEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIID 539
Query: 593 QAIVQSNYEKAVALIN 608
+S + A+ L++
Sbjct: 540 GLCNESCIDDAMELLS 555
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 154/416 (37%), Gaps = 76/416 (18%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV--Y 217
+V L ++ + + + V M++ G + +L GL D G A+ +L + Y
Sbjct: 396 TIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSY 455
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQ 276
G K YT +L L + A + ML DC PD +++V +L Q
Sbjct: 456 GCK-----PDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCP--PDEVTFNTVVASLCQ 508
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
GL+ ++++E+M + PD+V YN +++ +
Sbjct: 509 KGLVDRAIRVVEQMSENGCS---------------PDIVTYNCIIDGLCNESCIDDAMEL 553
Query: 337 FKQLRKSGLKPSAATY-----GLA-----------MESYRR--C-----LLKVLVRAFWE 373
L+ G KP T+ GL M + R C ++ + +
Sbjct: 554 LSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQ 613
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
+G + +A+ ++ M + G V +S Y + L G+ Q A+ E + + + P I
Sbjct: 614 KGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAAL---ELLSGMTNGTPDLI 670
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
T+ +I + G +++ + + + M + C P+ T ++ R D +A +
Sbjct: 671 TYNTVISNLTKAGKMEEALDLLRVMVSNGLC-PDTTTYRSLAYGVCREDGTDRAVRMLRR 729
Query: 492 TTRANSSGYTFLSGD----------------------GAPLKPDEYTYSSMLEASA 525
S T D + PDE TY +LEA A
Sbjct: 730 VQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALA 785
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 123/310 (39%), Gaps = 37/310 (11%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+V L ++ + + + V M+++G ++ GL ++ AM +L +
Sbjct: 501 TVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSC 560
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVG 278
K D+ + LL L R +A ++ N+M +C PD +++V +L Q G
Sbjct: 561 GCKPDI---VTFNTLLKGLCGVDRWEDAEQLMANMMRSNCP--PDELTFNTVITSLCQKG 615
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE------------------PDLVVYNAV 320
LL + ++ ++ M + + + D +L+ PDL+ YN V
Sbjct: 616 LLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTV 675
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA 380
++ + + + + + + +GL P TY + L E + A
Sbjct: 676 ISNLTKAGKMEEALDLLRVMVSNGLCPDTTTY------------RSLAYGVCREDGTDRA 723
Query: 381 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 440
V +R ++ G+ + Y ++ C + R A+ + S P E T+ L+
Sbjct: 724 VRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVS-SGCMPDESTYVILLE 782
Query: 441 SSMDGGHIDD 450
+ GG +D+
Sbjct: 783 ALAYGGLLDE 792
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/419 (20%), Positives = 175/419 (41%), Gaps = 48/419 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF--VYTKLLAILGKAGRPHEALRIFNL 253
+++ LG G W + + DW + +++L+S++ V + +++ LG+ GR A IF+
Sbjct: 90 IVRELGHSGQWEKVVKSFDW---MVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDR 146
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
+ ++ Y S+ G+ G L + V++ E M+ V +P+
Sbjct: 147 AV-GAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV----------------VCKPN 189
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
LVVYNAV++AC + +F+++ + G+ P T+ L+ A
Sbjct: 190 LVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITF------------NTLISAAGR 237
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
+ E ME+RG+ Y L C G+ ++E + +P I
Sbjct: 238 ANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVI 297
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T++ +I G + I++FQ M++ + EP+ N M+ +++R F +A +
Sbjct: 298 TYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAM 357
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
A D TY+++L++ ++ + + M G + +
Sbjct: 358 EEAG-------------FAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTY 404
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ L+ + G F + +AG P + ++ ++ + ++A+AL+ MA
Sbjct: 405 SALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMA 463
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 128/312 (41%), Gaps = 64/312 (20%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y ++ I + G EA I M E+ DI Y+++ + G+ G +E + L+E
Sbjct: 332 ICYNTMVDIHARLGNFDEAHSIRRAM-EEAGFAKDIVTYNALLDSYGKQGKFREAMSLLE 390
Query: 289 RMRQK-PSKRI------------KNMHRKNW-------DPVLEPDLVVYNAVLNACVPSH 328
M+Q+ S I HR L+PD+V+Y+ +++ C +
Sbjct: 391 EMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNG 450
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESY-RRCLLKVLVRA------FWEEGKINEAV 381
+ +++ +G++P+ TY +++Y R+CL +VR F+ ++ +
Sbjct: 451 SPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCL---MVRKNFPKLRFFLLPRVTMLL 507
Query: 382 AAVRNMEQRG----------VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ +Q+ V+ A V+ E+A NG KP
Sbjct: 508 KPSVDYDQQSLVDPKQKQALVLAAARVFREMA----KNG-----------------VKPN 546
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+TF+ ++ + ++D S+ + M+ G + +L + R ++ A+ LF E
Sbjct: 547 VVTFSSILNACSHCASVEDASSLLEAMRVFDGRVYGVTHGLLMGF-RIRVWRDAETLFNE 605
Query: 492 -TTRANSSGYTF 502
TT +++ F
Sbjct: 606 LTTLGHNTAVAF 617
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 169/384 (44%), Gaps = 46/384 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT ++++LG+ G + IF M + + +Y ++ + G+ G + ++L+ER
Sbjct: 145 IYTIMISLLGREGLLEKCSDIFEEMGAH-GVSRSVFSYTALINSYGRNGKYEVSLELLER 203
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKPS 348
M+++ + P ++ YN V+N+C W+G+ +F ++R G++P
Sbjct: 204 MKKER---------------VSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPD 248
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY L+ A G +EA R M + GVV + Y L
Sbjct: 249 IVTY------------NTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGK 296
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 467
R +++++ S + + ++ L+ + G+I+D +F+ M++ C PN
Sbjct: 297 LNRLDKVSELLKEMASTGNVPEIS-SYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAE 355
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T + +L +Y ++ + + +ELF E +N+ +PD TY+++++
Sbjct: 356 TYSILLGLYGKHGRYDEVRELFLEMKVSNT-------------EPDAATYNTLIDVFGEG 402
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
++ ++ MA + + + L+ + G + + E G IP +
Sbjct: 403 GYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAY 462
Query: 588 TEMLIQAIVQSN-YEKAVALINAM 610
T +I+A Q+ YE+A+ +N M
Sbjct: 463 TG-VIEAYGQAAMYEEALVTLNTM 485
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 142/352 (40%), Gaps = 44/352 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ LL + GK GR E +F L ++ N PD A Y+++ G+ G KE+V L
Sbjct: 356 TYSILLGLYGKHGRYDEVRELF-LEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHD 414
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M ++ +EP++ Y ++ AC + + + G+ PS+
Sbjct: 415 MAEEN---------------VEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSS 459
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
Y +E+Y + A +E EA+ + M + G T Y L
Sbjct: 460 KAYTGVIEAYGQA-------AMYE-----EALVTLNTMNEMGSKPTIETYNTLIYMFARG 507
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
G +++ ++ K+ ++ + +F G+I GG ++ I + M K P+ T
Sbjct: 508 GLYKETEAILLKMGDFGVARERD-SFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERT 566
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
+ A+L VY + ++ E F+E +SG + P+ Y ML A +
Sbjct: 567 LEAVLSVYCIAGLVDESVEQFQEI---KASG----------ILPNVMCYCMMLAVYAKSD 613
Query: 529 QW-EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 579
+W E +E + + + + Q + + ++E+ FD L G
Sbjct: 614 RWNEAYELLDEMLTNRASNIHQVIGQMIKGDFDDDSNWQMVEYVFDKLNSEG 665
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 131/340 (38%), Gaps = 39/340 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL G EA +F M E + PDI Y + T G++ L ++ +L++
Sbjct: 251 TYNTLLCACSNRGLGDEAEMVFRTMNEG-GVVPDITTYTYLVDTFGKLNRLDKVSELLKE 309
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + P++ YN +L A + VF+ ++++G P+A
Sbjct: 310 MASTGNV---------------PEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNA 354
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY +L+ + + G+ +E M+ A+ Y L
Sbjct: 355 ETY------------SILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEG 402
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGT 468
G +++ + + + + +P T+ GLI + GG DD I HM + P+
Sbjct: 403 GYFKEVVTLFHDMAE-ENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKA 461
Query: 469 VNAMLKVYSRNDMFSKA-------KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
+++ Y + M+ +A E+ + T + ++ G K E M
Sbjct: 462 YTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMG 521
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
+ A + + F V +G G Q ++ A++ +E SR
Sbjct: 522 DF-GVARERDSFNGVIEGFR-QGGQFEEAIKAYVEMEKSR 559
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 86/228 (37%), Gaps = 24/228 (10%)
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 468
G WQ ++ + + ++ KP E +T +I G ++ C IF+ M H ++ +
Sbjct: 121 GDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFS 180
Query: 469 VNAMLKVYSRNDMFSKAKELFEE-------------TTRANSSGYTFLSGDG-------- 507
A++ Y RN + + EL E T NS L +G
Sbjct: 181 YTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAEM 240
Query: 508 --APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
++PD TY+++L A + + E V++ M G D T + +L+ + +
Sbjct: 241 RHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRL 300
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 613
+ + G +P + +L N E A + M A
Sbjct: 301 DKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEA 348
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 90/232 (38%), Gaps = 34/232 (14%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ +K + S YT ++ G+A EAL N M + P I Y+++ + G
Sbjct: 450 MSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTM-NEMGSKPTIETYNTLIYMFARGG 508
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
L KE ++ +M R ++ +N V+ Q++ +
Sbjct: 509 LYKETEAILLKMGDFGVARERD---------------SFNGVIEGFRQGGQFEEAIKAYV 553
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
++ KS L P T L+ ++ + G ++E+V + ++ G++
Sbjct: 554 EMEKSRLVPDERT------------LEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMC 601
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
Y + + RW +A +++++ + R S + +I M G DD
Sbjct: 602 YCMMLAVYAKSDRWNEAYELLDEMLTNRASNIHQ------VIGQMIKGDFDD 647
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/463 (21%), Positives = 181/463 (39%), Gaps = 54/463 (11%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
L+ K L S FV+ L+++ + G +A++ F L H++ +
Sbjct: 153 LETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRL-----------TKKHNLKIPFNGCK 201
Query: 279 LLKELVKLIERMRQKPSKRIK-NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
L +ERM + S + + + D P++ +N ++N + K +F
Sbjct: 202 CL------LERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIF 255
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
++RK+GL+P+A ++ L+ + + G + E ME+ V
Sbjct: 256 DEIRKTGLQPTAVSF------------NTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVF 303
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y L LC + +DA + +++ R P ++TFT LI G +D + I+Q
Sbjct: 304 TYSALIDGLCKECQLEDANHLFKEMCD-RGLVPNDVTFTTLINGQCKNGRVDLALEIYQQ 362
Query: 458 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
M + ++ N ++ + F +A++ E T+ L PD++T
Sbjct: 363 MFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRG-------------LIPDKFT 409
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
Y+++L+ S E + K M G QLD ++ R GK E +L
Sbjct: 410 YTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREML 469
Query: 577 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRI 633
AG P +T ++ + + + L+ M + P IT + L +
Sbjct: 470 RAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVIT---YNVLMNGLCKQG 526
Query: 634 SRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDL 676
+ LLNA+ N +IT + L L C+ K D
Sbjct: 527 QVKNADMLLNAMLNLGVVPDDITYNIL---LQGHCKHGKLGDF 566
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 150/368 (40%), Gaps = 32/368 (8%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+PDLV Y V+N F + ++ + L+P Y ++
Sbjct: 832 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY------------NTIIDG 879
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ +++A+ + ME +G+ Y L CLCN GRW DA ++ + R P
Sbjct: 880 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE-RKINP 938
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
TF+ LI + + G + + ++ M K +P+I T ++++ + +D +AK++F
Sbjct: 939 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 998
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
E S + F PD TY+++++ + E V++ M+ G +
Sbjct: 999 EFMV----SKHCF---------PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 1045
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
+ L+ +AG C + + F ++ G P+ + + +L EKA+ +
Sbjct: 1046 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 1105
Query: 610 MAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 669
+ + T + + E K+E + CN + + V + + CR
Sbjct: 1106 LQRSKMEPTIYTYNIMIEG---MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 1162
Query: 670 --SEKERD 675
S++E D
Sbjct: 1163 KGSKEEAD 1170
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 162/402 (40%), Gaps = 52/402 (12%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
DL+ R T+L I + ++A+ +F+ M++ +P I ++ LL +
Sbjct: 154 DLRERLSKTRLRDI-----KLNDAIDLFSDMVKS-RPFPSIVDFNR---------LLSAI 198
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
VKL K + ++ +K + DL +N V+N Q + ++ K
Sbjct: 199 VKL------KKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKL 252
Query: 344 GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
G +P T G LV F ++++AV+ V M + G Y +
Sbjct: 253 GYEPDRVTIG------------SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAII 300
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHC 462
LC R DA ++I+ + +P +T+T L+ + D + M K
Sbjct: 301 DSLCKTKRVNDAFDFFKEIER-KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 359
Query: 463 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
PN+ T +A+L + +N +AKELFEE R + + PD TYSS++
Sbjct: 360 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS-------------IDPDIVTYSSLIN 406
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ + ++ M GC D + L+ +A + F + + G +
Sbjct: 407 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 466
Query: 583 HPLFFTEMLIQAIVQS-NYEKAVALINAMAYAPFHITERQWT 623
+ + + LIQ Q+ + +KA + M + F I+ WT
Sbjct: 467 NTVTYNT-LIQGFFQAGDVDKAQEFFSQMDF--FGISPDIWT 505
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 136/372 (36%), Gaps = 55/372 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G + A+S++D + + K D+ + Y ++ L K R ++A F +
Sbjct: 264 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA---YNAIIDSLCKTKRVNDAFDFFK-EI 319
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + P++ Y ++ L + +L+ M +K + P+++
Sbjct: 320 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK---------------ITPNVI 364
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y+A+L+A V + + +F+++ + + P TY L+
Sbjct: 365 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY------------SSLINGLCLHD 412
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+I+EA M +G + Y L C R +D M + ++ S R +T+
Sbjct: 413 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLVSNTVTY 471
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE--- 491
LI G +D F M P+I T N +L N KA +FE+
Sbjct: 472 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 531
Query: 492 -------------------TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
T + + F S LKPD TY++M+ T
Sbjct: 532 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 591
Query: 533 FEYVYKGMALSG 544
E +Y M G
Sbjct: 592 VEALYTKMKQEG 603
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/384 (19%), Positives = 147/384 (38%), Gaps = 46/384 (11%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A+S+L + L + D R L+ + R +A+ + + M+E PDI AY+
Sbjct: 242 ALSILGKMLKLGYEPD---RVTIGSLVNGFCRRNRVSDAVSLVDKMVE-IGYKPDIVAYN 297
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ +L + + + + + +K + P++V Y A++N S
Sbjct: 298 AIIDSLCKTKRVNDAFDFFKEIERKG---------------IRPNVVTYTALVNGLCNSS 342
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+W + + K + P+ TY L+ AF + GK+ EA M
Sbjct: 343 RWSDAARLLSDMIKKKITPNVITY------------SALLDAFVKNGKVLEAKELFEEMV 390
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
+ + Y L LC + R +A + + + S + +++ LI +
Sbjct: 391 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS-KGCLADVVSYNTLINGFCKAKRV 449
Query: 449 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
+D + +F+ M N T N +++ + + KA+E F + D
Sbjct: 450 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-------------DF 496
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
+ PD +TY+ +L + E +++ M LD + ++ + GK
Sbjct: 497 FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 556
Query: 568 LEHAFDSLLEAGEIPHPLFFTEML 591
F SL G P + +T M+
Sbjct: 557 AWSLFCSLSLKGLKPDIVTYTTMM 580
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 98/488 (20%), Positives = 188/488 (38%), Gaps = 99/488 (20%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIF-NL 253
LL GL D G +A+ + + + KR++ V YT ++ + K G+ EA +F +L
Sbjct: 509 LLGGLCDNGELEKALVIFEDM----QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 564
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK----------------PSKR 297
L+ L PDI Y ++ L GLL E+ L +M+Q+ ++
Sbjct: 565 SLK--GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAEL 622
Query: 298 IKNMHRKNWDPVLEPDL---VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK-----PSA 349
IK M + P L D+ V A+ + + + K + ++L ++GL +
Sbjct: 623 IKKMLSCGYAPSLLKDIKSGVCKKAL--SLLRAFSGKTSYDYREKLSRNGLSELKLDDAV 680
Query: 350 ATYGLAMES--YRRCL-LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
A +G ++S + + L+ A + K + ++ M+ G+ Y L C
Sbjct: 681 ALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCF 740
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI 466
C R PL + G + MK EPNI
Sbjct: 741 CR-----------------RSQLPLALAVLG------------------KMMKLGYEPNI 765
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T++++L Y + S+A L ++ F++G +P+ T+++++
Sbjct: 766 VTLSSLLNGYCHSKRISEAVALVDQ---------MFVTG----YQPNTVTFNTLIHGLFL 812
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL--LEAGEIPHP 584
++ + M GCQ D + ++ + G L AF+ L +E G++
Sbjct: 813 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL---AFNLLNKMEQGKLEPG 869
Query: 585 LFFTEMLIQAIVQSNY-EKAVALINAMAYAPFHITERQWTELFE--------SNEDRISR 635
+ +I + + + + A+ L M ++ L S+ R+
Sbjct: 870 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 929
Query: 636 DKLEKLLN 643
D +E+ +N
Sbjct: 930 DMIERKIN 937
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 163/378 (43%), Gaps = 50/378 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAIL 238
M +SG E L+ + G W A VL + G++ + +V++++LA
Sbjct: 352 MERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVR-----PNSYVFSRILASY 406
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
G+ ++ ++ M + + PD Y+ + T G+ L + +RMR +
Sbjct: 407 RDRGKWQKSFQVLREM-RNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEG---- 461
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
++PD V +N +++ S +F+ +++SG P TY
Sbjct: 462 -----------VQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTY------ 504
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
+++ +F E+ + + + M+ +G++ Y L +GR++DA+
Sbjct: 505 ------NIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIEC 558
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYS 477
+E +KS+ KP + LI + G + I+ F+ M+ D +P++ +N+++ +
Sbjct: 559 LEVMKSV-GLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFG 617
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+ ++A + + + LKPD TY+++++A +++ VY
Sbjct: 618 EDRRDAEAFSVLQYMKEND-------------LKPDVVTYTTLMKALIRVEKFDKVPAVY 664
Query: 538 KGMALSGCQLDQTKHAWL 555
+ M LSGC D+ A L
Sbjct: 665 EEMTLSGCTPDRKARAML 682
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 139/345 (40%), Gaps = 44/345 (12%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
DK +L + + ++ K+G + A+ F M++ L P A +V LG G
Sbjct: 250 DKIELDGQLL-NDIIVGFAKSGDVNRAMS-FLAMVQGNGLSPKTATLVAVITALGNAGRT 307
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+E + E +++ L P YNA+L V + K + ++
Sbjct: 308 EEAEAIFEELKEGG---------------LMPRTRAYNALLKGYVKTGSLKDAESIVSEM 352
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
+SG P TY L +++Y WE +I ++ ME GV + V+
Sbjct: 353 ERSGFSPDEHTYSLLIDAYANA-------GRWESARI-----VLKEMEASGVRPNSYVFS 400
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK- 459
+ + G+WQ + V+ ++++ S P + +I + +D ++ F M+
Sbjct: 401 RILASYRDRGKWQKSFQVLREMRNSGVS-PDRHFYNVMIDTFGKCNCLDHALATFDRMRM 459
Query: 460 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
+ +P+ T N ++ + ++ +KA+ELFE + S P TY+
Sbjct: 460 EGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCS-------------PCTTTYNI 506
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
M+ + +WE + + M G + + L+ ++G+
Sbjct: 507 MINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGR 551
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 133/346 (38%), Gaps = 27/346 (7%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+ YNA++ AC + + + ++R+ G Y ++S L R +
Sbjct: 185 LTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQS--------LTRTNKSD 236
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
+ + + A +E + + ++ +G AM + ++ S P T
Sbjct: 237 SSMLQKIYA--EIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLS-PKTAT 293
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+I + + G ++ +IF+ +K+ P NA+LK Y + A+ + E
Sbjct: 294 LVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEME 353
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
R SG++ PDE+TYS +++A A A +WE V K M SG + + +
Sbjct: 354 R---SGFS----------PDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFS 400
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 613
+L GK + +G P F+ M+ + + A+A + M
Sbjct: 401 RILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRME 460
Query: 614 PFHITERQWTELFESNEDRISRDKLEKLLNAL--CNCNAASSEITV 657
W L + + +K E+L A+ C+ ++ +
Sbjct: 461 GVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNI 506
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/503 (20%), Positives = 199/503 (39%), Gaps = 59/503 (11%)
Query: 116 LKEMFEKDLNWVLDDDVQLGSDYFA----KNVEWHPEKRWRSEAE-AIRVLVDRLSEREM 170
+KEM EK ++ D G + + VE+ P ++S E L+
Sbjct: 485 IKEMVEKGGECIISRDSNAGHEGTIEGADRTVEY-PSLGFKSLGEITYNTLMSAFIHNGH 543
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
+ K + +M + + T L+ GLG G +A+S+L + +K+ + V
Sbjct: 544 VDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREM----EKQGCEPSVV 599
Query: 231 -YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ L+A K + E+L +F+ M+ D++ Y V L + + + + + R
Sbjct: 600 TYSSLMASFYKRDQEEESLSLFDEMVRK-GCVADVSTYSLVINCLCKSDDVDQALDVFGR 658
Query: 290 MRQKP------------SKRIKN--------MHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
M+++ S +K+ + + + L PD VYN ++N V S++
Sbjct: 659 MKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNR 718
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+ ++ + P TY L+ + G++ EA M +
Sbjct: 719 VDEACKLVDSMKNQNILPDLFTY------------TSLLDGLGKSGRLEEAFNMFTKMTE 766
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
G Y L L G+ A+++ + R P +T++ LI S G ++
Sbjct: 767 EGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKR-CVPDVVTYSSLIDSLGKEGRVE 825
Query: 450 DCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
+ F++ + C PN+G ++++ + + M +A ELFEE R
Sbjct: 826 EAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCP---------- 875
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
P+ TY+++L A A + E + + M GC D + L+ + G
Sbjct: 876 ---PNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEA 932
Query: 569 EHAFDSLLEAGEIPHPLFFTEML 591
E F + E G +P + FT ++
Sbjct: 933 ESYFKRMKEKGIVPDVITFTSLI 955
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 122/593 (20%), Positives = 233/593 (39%), Gaps = 100/593 (16%)
Query: 67 MFRRAVAAKSGDPLV---GKPWERIERLKFRQLASESKEFAGDNLKRENLRELKEMFEKD 123
M +R A+ D +V W+ R+ L S + F N N+ E+F +
Sbjct: 188 MIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTN----NVSGALEIFNQM 243
Query: 124 -----------LNWVLDDDVQLGSDYFAKNVEWHPEKRWR--SEAEAIRVLVDRLSEREM 170
N+VL+ V+ G Y + + + ++R +A+ R+ V +
Sbjct: 244 KSFGCNPSTNMYNFVLELLVK-GGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGR 302
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
+ ++ M +SG+ L+ L G+ +A + G+K+ R +
Sbjct: 303 LDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFN---GMKNLRCSPNVVT 359
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L KAGR EA +F M E+ N PD AY+++ LG+ G L + M
Sbjct: 360 YTTLVNGLAKAGRLEEACEVFVEMKEN-NCSPDAIAYNTLIDGLGKAGEADMACGLFKEM 418
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ D L P+L YN +++ + + + +F L++ G P
Sbjct: 419 K---------------DRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVF 463
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG------------------- 391
TY L+ + G++++ +A ++ M ++G
Sbjct: 464 TY------------NTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEG 511
Query: 392 --------VVGTASV----YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
+G S+ Y L +NG +A+ ++E +K P +T+T L+
Sbjct: 512 ADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKK-HECIPTVVTYTTLV 570
Query: 440 ISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
G +D+ +S+ + M K CEP++ T ++++ + + D ++ LF+E R
Sbjct: 571 DGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCV 630
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
D TYS ++ + + V+ M G + + LL
Sbjct: 631 A-------------DVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSS 677
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAM 610
+ K F+ L E+ +P F +++ +V+SN ++A L+++M
Sbjct: 678 LVKDEKIDFALQIFNELQESSLVPDT-FVYNIMVNGLVKSNRVDEACKLVDSM 729
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 140/331 (42%), Gaps = 43/331 (12%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K++ L F YT LL LGK+GR EA +F M E+ + PD+ AY S+ LG+ G
Sbjct: 729 MKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGH-EPDVVAYTSLMDVLGKGG 787
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
L + + M +K PD+V Y++++++ + + ++ F+
Sbjct: 788 KLSHALIIFRAMAKKRCV---------------PDVVTYSSLIDSLGKEGRVEEAYYFFE 832
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
G P+ Y L+ +F ++G ++ A+ M++R
Sbjct: 833 NSISKGCTPNVGVY------------SSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVT 880
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
Y L L GR A ++E+++ + P +T+ LI G +D+ S F+ M
Sbjct: 881 YNNLLSGLAKAGRLNVAEKLLEEMEKV-GCVPDLVTYNILIDGVGKMGMVDEAESYFKRM 939
Query: 459 KDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
K+ P++ T ++++ + D +A ELF+ GY P TY
Sbjct: 940 KEKGIVPDVITFTSLIESLGKVDKLLEACELFDSM---EEEGYN----------PSVVTY 986
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+ +++ A + ++ M + GC D
Sbjct: 987 NVLIDILGRAGKVHEAAMIFHEMKVKGCMPD 1017
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 149/364 (40%), Gaps = 47/364 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y LL+ L K + AL+IFN L++ +L PD Y+ + L + + E KL++ M
Sbjct: 671 YKTLLSSLVKDEKIDFALQIFN-ELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSM 729
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + + PDL Y ++L+ S + + F +F ++ + G +P
Sbjct: 730 KNQN---------------ILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVV 774
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
Y L+ VL + GK++ A+ R M ++ V Y L L G
Sbjct: 775 AY--------TSLMDVLGKG----GKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEG 822
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
R ++A E S + P ++ LI S G +D + +F+ M + C PNI T
Sbjct: 823 RVEEAYYFFENSIS-KGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTY 881
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
N +L ++ + A++L EE + PD TY+ +++
Sbjct: 882 NNLLSGLAKAGRLNVAEKLLEEMEKVGCV-------------PDLVTYNILIDGVGKMGM 928
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA--FDSLLEAGEIPHPLFF 587
+ E +K M G D L+ + K LLE FDS+ E G P + +
Sbjct: 929 VDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDK--LLEACELFDSMEEEGYNPSVVTY 986
Query: 588 TEML 591
++
Sbjct: 987 NVLI 990
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/472 (18%), Positives = 187/472 (39%), Gaps = 95/472 (20%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GLG G A + +KD+ + + Y ++++LGKAGR EA ++F+ +
Sbjct: 398 LIDGLGKAGEADMACGLFKE---MKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLK 454
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---------------------- 293
E PD+ Y+++ LG+ G + +++ +I+ M +K
Sbjct: 455 EQ-GAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGAD 513
Query: 294 -----PSKRIKNMHRKNWDPVLE------------------------PDLVVYNAVLNAC 324
PS K++ ++ ++ P +V Y +++
Sbjct: 514 RTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGL 573
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAV 384
+ + + +++ K G +PS TY M S F++ + E+++
Sbjct: 574 GKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMAS------------FYKRDQEEESLSLF 621
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
M ++G V S Y + CLC + A+ V ++K +PL + L+ S +
Sbjct: 622 DEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKE-EGMEPLLGNYKTLLSSLVK 680
Query: 445 GGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKA-------------KELFE 490
ID + IF +++ P+ N M+ +++ +A +LF
Sbjct: 681 DEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFT 740
Query: 491 ETTRANSSG-----------YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
T+ + G +T ++ +G +PD Y+S+++ + + +++
Sbjct: 741 YTSLLDGLGKSGRLEEAFNMFTKMTEEGH--EPDVVAYTSLMDVLGKGGKLSHALIIFRA 798
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
MA C D ++ L+ + G+ + F++ + G P+ ++ ++
Sbjct: 799 MAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLI 850
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 147/391 (37%), Gaps = 46/391 (11%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC--------- 362
P +YN VL V + VF +L + ++P A T+ + + S+ R
Sbjct: 250 PSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEP 309
Query: 363 --------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
VL+ A + G I+EA M+ Y L L
Sbjct: 310 IQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAK 369
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 467
GR ++A V ++K + P I + LI G D +F+ MKD PN+
Sbjct: 370 AGRLEEACEVFVEMKE-NNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLR 428
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T N M+ V + +A +LF + L GA PD +TY+++++
Sbjct: 429 TYNIMISVLGKAGRQPEAWQLFHD-----------LKEQGAV--PDVFTYNTLIDVLGKG 475
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
Q + + K M G + ++ + E + G +E+ GEI +
Sbjct: 476 GQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITY---- 531
Query: 588 TEMLIQAIVQSNY-EKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALC 646
L+ A + + + ++AV L+ M T +T L + D+ LL +
Sbjct: 532 -NTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREME 590
Query: 647 NCNAASSEITVSNLSRALHALCRSEKERDLS 677
S +T S+L + + R ++E LS
Sbjct: 591 KQGCEPSVVTYSSLMASFYK--RDQEEESLS 619
>gi|298712189|emb|CBJ33061.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 531
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/473 (21%), Positives = 187/473 (39%), Gaps = 76/473 (16%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
EA+R+L D + + W + + L+LL+ + ++G A +
Sbjct: 91 EALRLLRD-MPSVGLVPDGWSYGATLGACAGTGQASTALRLLREMEERGIEATASNYKHA 149
Query: 216 VYGLKDKRD----------------LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
+Y D + L++ F Y +++ +AG+ +AL + M
Sbjct: 150 LYACCDSKTGENWEAAAALLRRSETLRNNFFYGRVIMACRRAGQWQKALEVLREM-SRVG 208
Query: 260 LYPDIAAYHSV--AVTLGQVG--------LLKELVK------LIE--------RMRQKPS 295
L PDI Y +V + VG LL+E K LI + +P
Sbjct: 209 LAPDIFCYDTVISVACMSSVGAQWKIARDLLREQAKTGVPCSLISYNLVLSACKKAGRPR 268
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK--SGLKPSAATYG 353
+ + ++ R PD++ YN ++ACV +W+ +V + +++ S L+P+ +YG
Sbjct: 269 QAV-SLLRAMRGHGCSPDVISYNTAISACVKRREWELALFVLRDMQRPDSRLEPNTYSYG 327
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
+ C G++++AV M + GV A Y +A +GRW+
Sbjct: 328 SVITVCATC------------GEVDQAVGLFDEMPEAGVKVDAFTYNSVAMAYARDGRWR 375
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNA 471
A+ + + L H + +++T I + G D +S+ + M++ +PN T A
Sbjct: 376 QAISTLSDMSELGHVGDV-VSYTAAIRACGWAGECDRALSLLREMREEKGVKPNEKTFAA 434
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
+ + + EL E R S+G+ PD Y+S ++A QWE
Sbjct: 435 AISACGHGGRWERGLELLSEMPR--STGFL----------PDADCYTSAIKACGKGGQWE 482
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
+ + A G D + + V + + + L AF G +P+P
Sbjct: 483 QAFTLLREAAAEGTTPDAKTYEFHRVSSPSSPEVKLRRGAFF----VGAMPYP 531
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 80/436 (18%), Positives = 169/436 (38%), Gaps = 66/436 (15%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
WR+A+ +L + L ++KS + L G+AG+ L + E +++
Sbjct: 19 WREALGLLYHIRALGITPNVKS---VSAALNACGQAGQWQRCLELLGEAREWGTELNEVS 75
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y++ + +E ++L +R PS L PD Y A L AC
Sbjct: 76 -YNTAISACARRDRFEEALRL---LRDMPSVG------------LVPDGWSYGATLGACA 119
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV------------------- 366
+ Q + +++ + G++ +A+ Y A+ Y C K
Sbjct: 120 GTGQASTALRLLREMEERGIEATASNYKHAL--YACCDSKTGENWEAAAALLRRSETLRN 177
Query: 367 ------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY---YELACCLCNNGRWQDAM- 416
++ A G+ +A+ +R M + G+ Y +AC +W+ A
Sbjct: 178 NFFYGRVIMACRRAGQWQKALEVLREMSRVGLAPDIFCYDTVISVACMSSVGAQWKIARD 237
Query: 417 LVVEKIKSLRHSKPLEITFTGLIISSMD-GGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 474
L+ E+ K+ P + L++S+ G +S+ + M+ H C P++ + N +
Sbjct: 238 LLREQAKT---GVPCSLISYNLVLSACKKAGRPRQAVSLLRAMRGHGCSPDVISYNTAIS 294
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
+ + A + + R +S L+P+ Y+Y S++ AT + +
Sbjct: 295 ACVKRREWELALFVLRDMQRPDSR-----------LEPNTYSYGSVITVCATCGEVDQAV 343
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 594
++ M +G ++D + + + +R G+ + E G + + +T +
Sbjct: 344 GLFDEMPEAGVKVDAFTYNSVAMAYARDGRWRQAISTLSDMSELGHVGDVVSYTAAIRAC 403
Query: 595 IVQSNYEKAVALINAM 610
++A++L+ M
Sbjct: 404 GWAGECDRALSLLREM 419
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 150/368 (40%), Gaps = 32/368 (8%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+PDLV Y V+N F + ++ + L+P Y ++
Sbjct: 13 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY------------NTIIDG 60
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ +++A+ + ME +G+ Y L CLCN GRW DA ++ + R P
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE-RKINP 119
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
TF+ LI + + G + + ++ M K +P+I T ++++ + +D +AK++F
Sbjct: 120 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 179
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
E S + F PD TY+++++ + E V++ M+ G +
Sbjct: 180 EFMV----SKHCF---------PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 226
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
+ L+ +AG C + + F ++ G P+ + + +L EKA+ +
Sbjct: 227 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 286
Query: 610 MAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 669
+ + T + + E K+E + CN + + V + + CR
Sbjct: 287 LQRSKMEPTIYTYNIMIEG---MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 343
Query: 670 --SEKERD 675
S++E D
Sbjct: 344 KGSKEEAD 351
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 191/470 (40%), Gaps = 74/470 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
+++GL D+G +A+S+LD + + S YT LL + K+ +A+ + + M
Sbjct: 182 IIRGLCDRGRVGEALSLLD---DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 238
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C P+I Y+ + + + G + + + + R+ +PD
Sbjct: 239 AKGCT--PNIVTYNVIINGMCREGRVDDAREFLNRLSSYG---------------FQPDT 281
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR------------- 361
V Y VL + +W+ V +F ++ + P+ T+ + + + R
Sbjct: 282 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 341
Query: 362 -----C-----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
C L +++ ++G++++A + NM G Y + LC R
Sbjct: 342 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 401
Query: 412 WQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
W+DA L+ E ++ ++ P E+TF I G I+ + + M +H CE NI T
Sbjct: 402 WEDAKELLKEMVR--KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 459
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
NA++ + A ELF Y+ P KP+ TY+++L A +
Sbjct: 460 NALVNGFCVQGRVDSALELF----------YSM------PCKPNTITYTTLLTGLCNAER 503
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLF 586
+ + M C + L+ + G L++ A + ++E G P+ +
Sbjct: 504 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKG---LMDEAIELVEQMMEHGCTPNLIT 560
Query: 587 FTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRI 633
+ +L N E+A+ L++ + +P +T + S EDR+
Sbjct: 561 YNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL-SREDRV 609
>gi|299471432|emb|CBN79384.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 962
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 136/337 (40%), Gaps = 40/337 (11%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L L+K G +G+WR+ +++ + G + ++ ++Y +A + + GRP EA + +
Sbjct: 26 LHLIKAAGFRGNWREVAALVSEMGGKGVEGNV---YIYNTAIAAMARCGRPREAEALLTV 82
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
MLE ++ PD +Y+S + G L +L+ RM + S +L PD
Sbjct: 83 MLERDSIAPDTISYNSAINGHARCGDLDAARRLLGRMTELASG----------GALLHPD 132
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
YNAV NA V K + ++G+ P+ T Y CL A
Sbjct: 133 QFTYNAVANAAAKRGDAVAAAEVLKMMAEAGVTPNIIT-------YNSCLA-----ACKA 180
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
+G + AV + M + G+ Y G W++ +E ++ P +
Sbjct: 181 KGDLRRAVVLLEIMREDGIDPDQRSYSAAIATAGIRGLWEEVQGFLETMRE-EDLTPDTV 239
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
TF I + D G D S+ MK+ P+ + N +L + A L E+
Sbjct: 240 TFNTAIKAVADNGQCDVAFSLLAEMKNEGLTPDQISYNGVLGACGNAGEWKAALRLLEDM 299
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
+A + P+ Y YS+ ++A A +
Sbjct: 300 RQAG-------------VTPNAYNYSAAMDACGKAGR 323
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 37/217 (17%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y LA G A+ + +M ED + PD +Y + T G GL +E+ +E
Sbjct: 169 ITYNSCLAACKAKGDLRRAVVLLEIMRED-GIDPDQRSYSAAIATAGIRGLWEEVQGFLE 227
Query: 289 RMRQKP--------SKRIKNMHRKNWDPV------------LEPDLVVYNAVLNACVPSH 328
MR++ + IK + V L PD + YN VL AC +
Sbjct: 228 TMREEDLTPDTVTFNTAIKAVADNGQCDVAFSLLAEMKNEGLTPDQISYNGVLGACGNAG 287
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+WK + + +R++G+ P+A Y AM+ A + G+ EA+A + +M
Sbjct: 288 EWKAALRLLEDMRQAGVTPNAYNYSAAMD------------ACGKAGRQREALALLGHMR 335
Query: 389 QRGVVGTASVYYEL--ACCLCNNGRWQDAMLVVEKIK 423
+ GV + Y AC + + W A+ +++++K
Sbjct: 336 KAGVRADTACYNAAIDACSVAMD--WTAAVQLLQEMK 370
>gi|403366299|gb|EJY82949.1| hypothetical protein OXYTRI_19434 [Oxytricha trifallax]
Length = 1420
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 137/307 (44%), Gaps = 52/307 (16%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV-----AVTLGQVGL----- 279
Y L+ + R + A ++ + M ++ N+ PD Y ++ A Q G+
Sbjct: 621 TYNSLIDACVRCNRLNSAWQLLSEMQQN-NIVPDNFTYSTLIKGIRAENQSQNGISNPMD 679
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L++ L+E+M+Q + ++PD ++YN +++ACV H VF++
Sbjct: 680 LEKAFALLEQMKQS-------------NGGVKPDEILYNCLIDACVRFHDVNRAVAVFQE 726
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
++ S +KPS+ TYG +L++A+ +++ A + M+ ++ + Y
Sbjct: 727 MQFSNIKPSSVTYG------------ILIKAYGSANQLDNAFFVFKKMKDNCLIPNSVTY 774
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHM 458
L N + + AM V E +K R L I FT LI +D + ++Q M
Sbjct: 775 GCLIDACVKNNQIERAMEVFETMK--RDGVQLNTIIFTTLIKGFAKSFKLDQALEVYQIM 832
Query: 459 K--DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
K D +PN T N+++ R + KA E+FEE + S KPD T
Sbjct: 833 KMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFEEMKQPISH-----------TKPDLIT 881
Query: 517 YSSMLEA 523
YS+M++
Sbjct: 882 YSTMIKG 888
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 87/222 (39%), Gaps = 39/222 (17%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC------- 362
+ PD + +N ++ C + + F +F ++ LKP+ TY +++ RC
Sbjct: 580 MRPDEISFNTIIKGCAQEKKLQLAFEMFNLMKMQCLKPNDVTYNSLIDACVRCNRLNSAW 639
Query: 363 ----------------LLKVLVRAFWEEGK----------INEAVAAVRNMEQ-RGVVGT 395
L++ E + + +A A + M+Q G V
Sbjct: 640 QLLSEMQQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKP 699
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCIS 453
+ Y C R+ D V + ++ S KP +T+ LI + +D+
Sbjct: 700 DEILYNCLIDAC--VRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKAYGSANQLDNAFF 757
Query: 454 IFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
+F+ MKD+C PN T ++ +N+ +A E+FE R
Sbjct: 758 VFKKMKDNCLIPNSVTYGCLIDACVKNNQIERAMEVFETMKR 799
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 138/317 (43%), Gaps = 39/317 (12%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++PD V+YN++++ C ++Q F ++ ++ G+ P+ T+ L+ VR
Sbjct: 397 IKPDEVLYNSIIDGCSKNNQIAKAFLLYDEMLGEGVTPTTITFN--------SLIDCCVR 448
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD---AMLVVEKIKSLR 426
+ G ++A + M+++ V Y L + + + QD A ++ ++++
Sbjct: 449 S----GNQDQAWRVLEQMKEKQVKPDNYTYSTLFKGIKSENQRQDLEKAFVLYNQLQNSN 504
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
P EI F L+ + ++ +D + +F+ +K +P I N D +
Sbjct: 505 DFTPDEILFNVLLDACINCKQLDRAVELFKQLKPQSQPQIQVSNT--------DDADNSL 556
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
L + A ++ S + ++PDE +++++++ A + + ++ M + +
Sbjct: 557 SLEDSPDSAKNAPAVVNSSNHHFMRPDEISFNTIIKGCAQEKKLQLAFEMFNLMKMQCLK 616
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE---IPHPLFFTEML--IQAIVQS--- 598
+ + L+ R C+ L A+ L E + +P ++ ++ I+A QS
Sbjct: 617 PNDVTYNSLIDACVR---CNRLNSAWQLLSEMQQNNIVPDNFTYSTLIKGIRAENQSQNG 673
Query: 599 -----NYEKAVALINAM 610
+ EKA AL+ M
Sbjct: 674 ISNPMDLEKAFALLEQM 690
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 19/157 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++KG + + +QA+ +L+ ++ + +Y LL KA AL+++ M
Sbjct: 885 MIKGFCREKNIQQALIMLN---DMEKNNIMADEVLYNSLLDGCCKANEIEMALKVYKNM- 940
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + P Y + G+ L + + ++E M++ + P L+
Sbjct: 941 EILKIKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDG---------------IRPGLI 985
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
VY +L C+ S Q K +F +R G++ TY
Sbjct: 986 VYTCLLQTCIKSRQLKTAEQLFHDMRIQGIRGDQLTY 1022
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 167/397 (42%), Gaps = 64/397 (16%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
R ++SR TKL+ IL + G+P EA IFN + E+ + P + Y ++ L
Sbjct: 69 RTVRSR---TKLMNILIEKGKPQEAQLIFNSLTEEGH-RPTLITYTTLLAAL-------- 116
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
RQK K I ++ K L+PD V +NA++NA S K +F++++
Sbjct: 117 -------TRQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMKD 169
Query: 343 SGLKPSAATYGLAMESY------RRCL------------------LKVLVRAFWEEGKIN 378
G KP+ +T+ ++ Y CL L+RA+ + +I
Sbjct: 170 RGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRIT 229
Query: 379 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
EA V M G+ Y LA NG A ++ ++++ R P E T +
Sbjct: 230 EAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNR-VMPNERTCGII 288
Query: 439 IISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY---SRNDMFSKAKELFEETTR 494
I G + D + M+++ PN+ N+++K + + D +A L EE
Sbjct: 289 INGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFG- 347
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
+KPD T+S+++ A ++ + + ++ M +G + D +
Sbjct: 348 ---------------VKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSI 392
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
L RAG+ E ++ ++G P+ + FT ++
Sbjct: 393 LAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTII 429
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 149/356 (41%), Gaps = 57/356 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ + G+ ++AM + +KD+ + + L+ G AG P E L++ +LM
Sbjct: 147 MINAFSESGNVKEAMKIF---RKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMS 203
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK---NMHRKNWDPVLEP 312
++ N+ P+ ++S LI K KRI N+ K L+P
Sbjct: 204 QEENVKPNDRTFNS----------------LIRAWCNK--KRITEAWNVVYKMAASGLQP 245
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
D+V YN + A + + + +++ + + P+ T G +++ +
Sbjct: 246 DVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCG------------IIINGYC 293
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELA---CCLCNNGRWQDAMLVVEKIKSLRHSK 429
+EGK+ +A+ + M GV ++ L + + +A+ ++E+ K
Sbjct: 294 KEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEF----GVK 349
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P +TF+ ++ + G +D C IF M K EP+I + + K Y R KA+ L
Sbjct: 350 PDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESL 409
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
T SG ++P+ +++++ +A + EY VY+ M G
Sbjct: 410 L---TAMGKSG----------VQPNVVIFTTIISGWCSAGKMEYASRVYEKMCEMG 452
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 191/470 (40%), Gaps = 74/470 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
+++GL D+G +A+S+LD + + S YT LL + K+ +A+ + + M
Sbjct: 151 IIRGLCDRGRVGEALSLLD---DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 207
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C P+I Y+ + + + G + + + + R+ +PD
Sbjct: 208 AKGCT--PNIVTYNVIINGMCREGRVDDAREFLNRLSSYG---------------FQPDT 250
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR------------- 361
V Y VL + +W+ V +F ++ + P+ T+ + + + R
Sbjct: 251 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 310
Query: 362 -----C-----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
C L +++ ++G++++A + NM G Y + LC R
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 370
Query: 412 WQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
W+DA L+ E ++ ++ P E+TF I G I+ + + M +H CE NI T
Sbjct: 371 WEDAKELLKEMVR--KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 428
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
NA++ + A ELF Y+ P KP+ TY+++L A +
Sbjct: 429 NALVNGFCVQGRVDSALELF----------YSM------PCKPNTITYTTLLTGLCNAER 472
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLF 586
+ + M C + L+ + G L++ A + ++E G P+ +
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKG---LMDEAIELVEQMMEHGCTPNLIT 529
Query: 587 FTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRI 633
+ +L N E+A+ L++ + +P +T + S EDR+
Sbjct: 530 YNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL-SREDRV 578
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 189/486 (38%), Gaps = 67/486 (13%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L + K L +G RQA S L+ +++ + + + Y L+ L ++G EAL ++
Sbjct: 163 LIIFKSLFIRGGLRQAPSALEK---MREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRR 219
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ--------------------- 292
M+ + L P + + ++ V G+ +K ++ L+E M
Sbjct: 220 MVSE-GLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDG 278
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
K + + M R + D PD+V Y +++A + + +F +++ S KP TY
Sbjct: 279 KIDEAYRIMKRMDDDGC-GPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTY 337
Query: 353 GLAMESYRRC-----------------------LLKVLVRAFWEEGKINEAVAAVRNMEQ 389
++ + C +LV A + G+INEA + M +
Sbjct: 338 VTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRK 397
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
+GV+ Y L L R DA+ + ++SL +P T+ LI GH
Sbjct: 398 QGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESL-GVEPTAYTYILLIDYHGKSGHPG 456
Query: 450 DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
+ F+ MK PNI NA L + +AK +F E SSG
Sbjct: 457 KALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNEL---KSSG--------- 504
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
L PD TY+ M++ + Q + + M+ C+ D L+ +AG+
Sbjct: 505 -LAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEA 563
Query: 569 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTEL 625
F + E P + + +L + +KAV L +M +P IT +
Sbjct: 564 WQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDC 623
Query: 626 FESNED 631
N++
Sbjct: 624 LCKNDE 629
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 163/399 (40%), Gaps = 56/399 (14%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ L KAGR +EA + + M + + P++ Y+++ L + L + + L M
Sbjct: 372 FTILVNALCKAGRINEAFDLLDTMRKQ-GVLPNLHTYNTLISGLLRANRLDDALDLFSNM 430
Query: 291 RQ---KPSKR----IKNMHRKNWDPV-------------LEPDLVVYNAVLNACVPSHQW 330
+P+ + + H K+ P + P++V NA L + +
Sbjct: 431 ESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRL 490
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
+F +L+ SGL P + TY + M+ Y + G+++EA+ + M +
Sbjct: 491 GEAKAMFNELKSSGLAPDSVTYNMMMKCYSKV------------GQVDEAIKLLSEMSKV 538
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
V L L GR ++A + +++ + + P +T+ L+ G I
Sbjct: 539 QCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLA-PTVVTYNILLAGLGKEGQIQK 597
Query: 451 CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
+ +F+ M H C PN T N +L +ND A ++F + T N
Sbjct: 598 AVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNC------------ 645
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
+PD T+++++ +Q + +++ M +L + H L K +E
Sbjct: 646 -RPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK----KLLRPDHVTLCTLLPGVIKSGQIE 700
Query: 570 HAF----DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
AF D + G F+ +++ + ++ EKA+
Sbjct: 701 DAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAI 739
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 171/418 (40%), Gaps = 65/418 (15%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK 281
+R++ + + K L I G + AL + + + +Y+ + L Q G K
Sbjct: 156 RRNVDTYLIIFKSLFIRGGLRQAPSALE----KMREAGFVLNAYSYNGLIHFLLQSGFCK 211
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
E +++ RM + L+P L ++A++ A K V + +++
Sbjct: 212 EALEVYRRMVSEG---------------LKPSLKTFSALMVASGKRRNIKTVMGLLEEME 256
Query: 342 KSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
GL+P+ TY + +R +GKI+EA ++ M+ G Y
Sbjct: 257 SMGLRPNIYTY------------TICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTV 304
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-D 460
L LC + DAM + K+KS H KP ++T+ L+ D GH+D I+ M+ D
Sbjct: 305 LIDALCTARKLDDAMCLFTKMKSSSH-KPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEAD 363
Query: 461 HCEPNIGT----VNAMLKVYSRNDMFSKAKELFEETTRANSSGY-TFLSG---------- 505
P++ T VNA+ K N+ F + ++ N Y T +SG
Sbjct: 364 GYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDA 423
Query: 506 -------DGAPLKPDEYTYSSMLE----ASATAHQWEYFEYV-YKGMALSGCQLDQTKHA 553
+ ++P YTY +++ + E FE + +G+A + + + ++
Sbjct: 424 LDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYS 483
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
L E R G+ + F+ L +G P + + M+ ++A+ L++ M+
Sbjct: 484 --LAEMGRLGEAKAM---FNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMS 536
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 147/379 (38%), Gaps = 76/379 (20%)
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC----------NLY-------- 261
K K+ +R V+ K LG +P L+++NL+++ NL+
Sbjct: 766 KHKKTSVARNVFVKFTKELGV--KP--TLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGC 821
Query: 262 -PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAV 320
PD Y+S+ G+ G + EL L + M + K P+ + YN V
Sbjct: 822 APDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCK---------------PNTITYNMV 866
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR------------------- 361
++ V S++ ++ L P+ T+G ++ +
Sbjct: 867 ISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGC 926
Query: 362 ----CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
+ +LV + + G ++ A + M + G+ Y L LC GR DA+
Sbjct: 927 RPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALH 986
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 476
EK+K P + + +I ++ +S+F M++ P++ T N+++
Sbjct: 987 YFEKLKQ-AGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNL 1045
Query: 477 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
M +A +++EE F+ LKP+ +TY++++ + E +
Sbjct: 1046 GIVGMIEEAGKIYEEL--------QFIG-----LKPNVFTYNALIRGYTLSGNSELAYGI 1092
Query: 537 YKGMALSGCQLDQTKHAWL 555
YK M + GC + A L
Sbjct: 1093 YKKMMVGGCDPNTGTFAQL 1111
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/423 (20%), Positives = 160/423 (37%), Gaps = 73/423 (17%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
V L+ L KAGR EA ++F M E+ NL P + Y+ + LG+ G +++ V+L E
Sbjct: 545 IVINSLIDTLYKAGRVEEAWQMFCRM-EEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFE 603
Query: 289 RMRQ---KPSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M P+ N M K PD++ +N +++ + +
Sbjct: 604 SMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQN 663
Query: 329 QWKGVFWVFKQLRK---------SGLKPSAATYGLAMESYRRC---LLKV---LVRAFWE 373
Q K W+F Q++K L P G +++R +V + R+FWE
Sbjct: 664 QIKNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWE 723
Query: 374 --------EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
E +A+ + R + SV + LC + + A V K
Sbjct: 724 DVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKE 783
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSR----ND 480
KP + LI ++ +++ ++F+ MK C P+ T N+++ + + N+
Sbjct: 784 LGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINE 843
Query: 481 MFSKAKELFEETTRANSSG---------------------YTFLSGDGAPLKPDEYTYSS 519
+F E+ + N+ Y +SGD P T+
Sbjct: 844 LFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGD---FSPTPCTFGP 900
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 579
+++ + + + ++ GM GC+ + + L+ + G F +++ G
Sbjct: 901 LIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG 960
Query: 580 EIP 582
P
Sbjct: 961 IRP 963
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 23/159 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ GL G A + D + YG + + +Y L+ GK G A F
Sbjct: 901 LIDGLLKSGRLDDAHEMFDGMVHYGCR-----PNSAIYNILVNGYGKLGHVDTACEFFKR 955
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M+++ + PD+ +Y + L G + + + E+++Q L+PD
Sbjct: 956 MVKE-GIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAG---------------LDPD 999
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
LV YN ++N S + + +F +++ G+ P TY
Sbjct: 1000 LVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTY 1038
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 191/470 (40%), Gaps = 74/470 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
+++GL D+G +A+S+LD + + S YT LL + K+ +A+ + + M
Sbjct: 151 IIRGLCDRGRVGEALSLLD---DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 207
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C P+I Y+ + + + G + + + + R+ +PD
Sbjct: 208 AKGCT--PNIVTYNVIINGMCREGRVDDAREFLNRLSSYG---------------FQPDT 250
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR------------- 361
V Y VL + +W+ V +F ++ + P+ T+ + + + R
Sbjct: 251 VSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQ 310
Query: 362 -----C-----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
C L +++ ++G++++A + NM G Y + LC R
Sbjct: 311 MSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAER 370
Query: 412 WQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
W+DA L+ E ++ ++ P E+TF I G I+ + + M +H CE NI T
Sbjct: 371 WEDAKELLKEMVR--KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 428
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
NA++ + A ELF Y+ P KP+ TY+++L A +
Sbjct: 429 NALVNGFCVQGRVDSALELF----------YSM------PCKPNTITYTTLLTGLCNAER 472
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLF 586
+ + M C + L+ + G L++ A + ++E G P+ +
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKG---LMDEAIELVEQMMEHGCTPNLIT 529
Query: 587 FTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRI 633
+ +L N E+A+ L++ + +P +T + S EDR+
Sbjct: 530 YNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVL-SREDRV 578
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 163/387 (42%), Gaps = 63/387 (16%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G + M+V+D + K + + YT ++ GKAGR +ALR+F+ M +D P+
Sbjct: 371 GFLDEGMAVID---TMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKM-KDLGCAPN 426
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y+SV LG+ ++++K++ M+ P+ +N +L
Sbjct: 427 VYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCA---------------PNRATWNTMLAV 471
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV----------------- 366
C + V V ++++ G +P T+ + SY RC +V
Sbjct: 472 CSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPC 531
Query: 367 ------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
L+ A G A + +++M+ +G + Y L C G + +E
Sbjct: 532 VTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRG----IE 587
Query: 421 KIKSLRHSK---PLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVY 476
K++ + P I L++S+ H+ F ++ + +P++ +N+ML ++
Sbjct: 588 KVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMF 647
Query: 477 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
SRN MFSKA+E+ F+ G L+P+ +TY+ +++ + E V
Sbjct: 648 SRNKMFSKAREMLH-----------FIHECG--LQPNLFTYNCLMDLYVREDECWKAEEV 694
Query: 537 YKGMALSGCQLDQTKHAWLLVEASRAG 563
KG+ S + D + ++ R G
Sbjct: 695 LKGIQNSVPEPDVVSYNTVIKGFCRKG 721
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 187/466 (40%), Gaps = 61/466 (13%)
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWV---YGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
E LLK L G+W +A+ + +W +G L ++ V ++ ILG+ +
Sbjct: 141 EADFPSLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQVV-ELMVRILGRESQHSI 199
Query: 247 ALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
A ++F+L+ +E +L D+ AY ++ + G K + L ++M
Sbjct: 200 ASKLFDLIPVEKYSL--DVRAYTTILHAYARSGKYKRAIDLFDKMEGIG----------- 246
Query: 306 WDPVLEPDLVVYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR--- 361
L+P LV YN +L+ W + + ++R GL+ T + + R
Sbjct: 247 ----LDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGM 302
Query: 362 --------------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
+ +++ F + G EA++ ++ ME + Y E
Sbjct: 303 LDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNE 362
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD- 460
LA G + M V++ + S + P IT+T +I + G DD + +F MKD
Sbjct: 363 LAATYVRAGFLDEGMAVIDTMTS-KGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDL 421
Query: 461 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 520
C PN+ T N++L + + S+ +++ + +G P+ T+++M
Sbjct: 422 GCAPNVYTYNSVLAMLGKK---SRTEDVIKVLCEMKLNG----------CAPNRATWNTM 468
Query: 521 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 580
L + + Y V + M G + D+ L+ +R G + ++++G
Sbjct: 469 LAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGF 528
Query: 581 IPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 626
P + +L + +++ A ++I M F E ++ L
Sbjct: 529 TPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLL 574
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 105/472 (22%), Positives = 178/472 (37%), Gaps = 79/472 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
+L G +++A+ + D + G+ L + Y +L + GK GR RI L+
Sbjct: 222 ILHAYARSGKYKRAIDLFDKMEGIGLDPTLVT---YNVMLDVYGKMGRSWG--RILELLD 276
Query: 255 -LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
+ L D +V G+ G+L E K + ++ K P
Sbjct: 277 EMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYK---------------PG 321
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
V+YN++L + + + K++ + P + TY +Y VRA
Sbjct: 322 TVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATY--------VRA--- 370
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
G ++E +A + M +GV+ A Y + GR DA+ + K+K L P
Sbjct: 371 -GFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDL-GCAPNVY 428
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYS--------------- 477
T+ ++ +D I + MK + C PN T N ML V S
Sbjct: 429 TYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREM 488
Query: 478 RNDMFSKAKELFE-----------ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
+N F K+ F E A G SG P TY+++L A A
Sbjct: 489 KNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSG----FTPCVTTYNALLNALAH 544
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
W+ E V + M G + ++T ++ LL S+AG +E + + P
Sbjct: 545 RGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFP---- 600
Query: 587 FTEMLIQAIVQSNY--------EKAVALINAMAYAPFHITERQWTELFESNE 630
+ +L++ +V SN+ E+A + Y P + +F N+
Sbjct: 601 -SWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNK 651
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 163/416 (39%), Gaps = 46/416 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ G G AM + +K K + Y L+ LGKAGR EA F+ ML
Sbjct: 106 LIRYFGRSGQLDSAMEMFRE---MKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAML 162
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E L P+I Y+ + +VG L + L M+++ +P +V
Sbjct: 163 ER-GLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRG---------------FQPSVV 206
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN +L+A + + +F ++ G P + TY LV + G
Sbjct: 207 TYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTY------------STLVNGLGKSG 254
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
++ EA R M RGV Y L L G D + + K S + P +F
Sbjct: 255 RVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNM-DRVWKLMKEMSRKGFHPDAFSF 313
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
++ + D +F M + C+P++ + N ++ Y+R ++A+++ EE
Sbjct: 314 NTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVE 373
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
A G+ P+ TY+S++ AT Q + V + M +GC+ D +
Sbjct: 374 A---GFI----------PETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNR 420
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L+ + G+ F + + G P L + + ++A+ L M
Sbjct: 421 LMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDM 476
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 161/385 (41%), Gaps = 45/385 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+TKL+ IL +G A ++ L+ + C L D AY+ + G+ G L +++
Sbjct: 68 FTKLIDILVNSGEFERAELVYKKLVQKGCQL--DRFAYNVLIRYFGRSGQLDSAMEMFRE 125
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ K S EPD Y ++NA + + + F + + GL P+
Sbjct: 126 MKIKGS---------------EPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNI 170
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L M+++R+ G+++ A+ M++RG + Y L LC+
Sbjct: 171 PTYNLLMDAFRKV------------GQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSA 218
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 468
GR A + K+ P T++ L+ G +++ +F+ M D ++
Sbjct: 219 GRVGAARKLFHKMTG-DGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVN 277
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
N++L ++ + +L +E +R PD ++++++++A A+
Sbjct: 278 YNSLLATLAKAGNMDRVWKLMKEMSRKG-------------FHPDAFSFNTIMDALGKAN 324
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ + V+ M SGC+ D + L+ +R G + ++EAG IP +
Sbjct: 325 KPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYN 384
Query: 589 EMLIQAIVQSNYEKAVALINAMAYA 613
++ ++A A++ M A
Sbjct: 385 SLIHWLATDGQVDEAFAVLEEMETA 409
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/301 (18%), Positives = 118/301 (39%), Gaps = 19/301 (6%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L+ G+ A + + Q+G Y L +G+ AM + ++K ++
Sbjct: 71 LIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMK-IK 129
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 485
S+P E T+ L+ + G + + S F M + PNI T N ++ + + A
Sbjct: 130 GSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMA 189
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
LF E R +P TY+ +L+A +A + ++ M GC
Sbjct: 190 LGLFAEMKRRG-------------FQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGC 236
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
D ++ L+ ++G+ F +++ G + + +L N ++
Sbjct: 237 SPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWK 296
Query: 606 LINAMAYAPFHITERQWTELFE----SNEDRISRDKLEKLLNALCNCNAASSEITVSNLS 661
L+ M+ FH + + + +N+ +R+ +++ + C + S I + + +
Sbjct: 297 LMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYA 356
Query: 662 R 662
R
Sbjct: 357 R 357
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 160/381 (41%), Gaps = 45/381 (11%)
Query: 214 DWVYGLKDKRDLKSR---FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
D V + R LK R YT L+ L +A RP AL + M ++ + + ++
Sbjct: 162 DAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQM-QEVGYEVGVHLFTTL 220
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
L + G + + + L++ ++ LEPD+V+YN ++ +
Sbjct: 221 VRALAREGQVADALALVDEVKGS---------------CLEPDIVLYNVCIDCFGKAGNV 265
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
+ F +L+ GLKP +Y ++ VL +A G++ EA ME
Sbjct: 266 DMAWKFFHELKAQGLKPDDVSY--------TSMIWVLCKA----GRLGEAEELFAQMEAE 313
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
V A Y + + GR++DA ++E+++ R P ++F ++ +D+
Sbjct: 314 RSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRE-RGCIPSVVSFNSILTCLGKKRKVDE 372
Query: 451 CISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 510
+S+F+ MK EPN T N ++ + +A + +E A+ L
Sbjct: 373 ALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHAS-------------L 419
Query: 511 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 570
P+ T + M++ A + E +++ + GC D + L+ + G+
Sbjct: 420 FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYR 479
Query: 571 AFDSLLEAGEIPHPLFFTEML 591
F+ +L+AG +P+ +T ++
Sbjct: 480 LFEKMLDAGHNANPVVYTSLI 500
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 95/473 (20%), Positives = 183/473 (38%), Gaps = 87/473 (18%)
Query: 150 RWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQA 209
++R A VL+ L+E + + +R M + G L++ L +G A
Sbjct: 174 KFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADA 233
Query: 210 MSVLDWV------------------YGLKDKRDLKSRFV--------------YTKLLAI 237
++++D V +G D+ +F YT ++ +
Sbjct: 234 LALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWV 293
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L KAGR EA +F M + ++ P AY+++ + G G ++ KL+ER+R++
Sbjct: 294 LCKAGRLGEAEELFAQMEAERSV-PCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCI- 351
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM- 356
P +V +N++L + +F+ ++K +P+++TY + +
Sbjct: 352 --------------PSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIID 396
Query: 357 ---------ESYR-------------RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
E+YR + ++V + K+ EA + QRG
Sbjct: 397 MLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNP 456
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
Y L L G+ +A + EK+ H+ + +T LI + G +D I
Sbjct: 457 DCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN-PVVYTSLIRNFFIHGRKEDGHKI 515
Query: 455 FQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 513
F+ + + C+P++ +N + + K + +FE+ Y FL PD
Sbjct: 516 FKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDI-----RSYGFL--------PD 562
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
+YS ++ A Q ++ M G LD + ++ ++GK H
Sbjct: 563 VRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 615
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 94/471 (19%), Positives = 182/471 (38%), Gaps = 91/471 (19%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
+ ++VDRL + + +K +Q G L+ GLG KG +A + +
Sbjct: 426 VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFE--- 482
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN------------------------- 252
+ D + VYT L+ GR + +IF
Sbjct: 483 KMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAG 542
Query: 253 ------LMLEDCNLY---PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR 303
++ ED Y PD+ +Y + L + G +E + M+Q+
Sbjct: 543 EVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG--------- 593
Query: 304 KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCL 363
D YNAV++ S + + + +++++ ++P+ ATYG
Sbjct: 594 ------FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYG---------- 637
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
+V + +++EA + +G+ +Y L GR +A L++E++
Sbjct: 638 --AIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 695
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT----VNAMLKVYSR 478
+ P T+ L+ + + I++ + FQ MK+ C PN T +N + +V
Sbjct: 696 K-KGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKY 754
Query: 479 NDMFSKAKELFEETTRANSSGYT-FLSG--------DGAPL---------KPDEYTYSSM 520
N F +++ ++ N YT +SG D L PD +++++
Sbjct: 755 NKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNAL 814
Query: 521 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
+E + A++ V++ L GC+++ K L++A +C LE A
Sbjct: 815 IEGMSNANRAMEAYQVFEETRLRGCRIN-IKSCISLLDALNKSEC--LEQA 862
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 107/260 (41%), Gaps = 20/260 (7%)
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
YGL ++ L LVRA ++++AV AV M + S Y L L R
Sbjct: 140 YGLPNQACAH-LAAALVRA----RRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARR 194
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVN 470
+ A+ ++ +++ + + + + FT L+ + G + D +++ +K C EP+I N
Sbjct: 195 PERALELLRQMQEVGYEVGVHL-FTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYN 253
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
+ + + A + F E L G LKPD+ +Y+SM+ A +
Sbjct: 254 VCIDCFGKAGNVDMAWKFFHE-----------LKAQG--LKPDDVSYTSMIWVLCKAGRL 300
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
E ++ M + +++ AG+ + L E G IP + F +
Sbjct: 301 GEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSI 360
Query: 591 LIQAIVQSNYEKAVALINAM 610
L + ++A++L M
Sbjct: 361 LTCLGKKRKVDEALSLFEVM 380
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 170/417 (40%), Gaps = 51/417 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G G R+A +++ L++ + Y L+ K+G +AL++ L
Sbjct: 148 LIRGFCRSGKTRKATRIMEI---LENSGAVPDVITYNVLIGGYCKSGEIDKALQV----L 200
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E ++ PD+ Y+++ +L G LKE +++++R M R+ + PD++
Sbjct: 201 ERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDR----------QMQRECY-----PDVI 245
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y ++ A + ++RK G KP TY VL+ +EG
Sbjct: 246 TYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY------------NVLINGICKEG 293
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEIT 434
+++EA+ + NM G + + +C+ GRW DA L+ + ++ + P +T
Sbjct: 294 RLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLR--KGCSPSVVT 351
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
F LI + I + + M H C PN + N +L + + +A E E
Sbjct: 352 FNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLE--- 408
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
+ G PD TY+++L A + + + ++ GC +
Sbjct: 409 --------IMVSRGC--YPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYN 458
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
++ ++ GK + + G P + ++ +L + ++A+ + + M
Sbjct: 459 TVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDM 515
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/355 (19%), Positives = 140/355 (39%), Gaps = 58/355 (16%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD++ +++ S + + + + L SG P TY VL+ +
Sbjct: 140 PDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITY------------NVLIGGY 187
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ G+I++A+ +E+ V Y + LC++G+ ++AM V+++ + R P
Sbjct: 188 CKSGEIDKALQV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDR-QMQRECYPD 243
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
IT+T LI ++ + + + + M K C+P++ T N ++ + +A +
Sbjct: 244 VITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFL- 302
Query: 491 ETTRANSSGYTFLSGDGAPL---KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
+ PL +P+ T++ +L + + +W E + M GC
Sbjct: 303 ---------------NNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAV 604
L+ R LL A D L + G +P+ L + +L + ++A+
Sbjct: 348 SVVTFNILINFLCRK---RLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAI 404
Query: 605 ALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSN 659
+ M ++ + ++ N LL ALC A + + + N
Sbjct: 405 EYLEIM------VSRGCYPDIVTYN----------TLLTALCKDGKADAAVEILN 443
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 36/183 (19%)
Query: 261 YPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAV 320
YPDI Y+++ L + G V+++ ++ K P L+ YN V
Sbjct: 416 YPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGC---------------SPVLITYNTV 460
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA 380
++ + + + +++R+ GLKP TY L+R EGK++EA
Sbjct: 461 IDGLTKVGKTEYAAELLEEMRRKGLKPDIITY------------STLLRGLGCEGKVDEA 508
Query: 381 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM----LVVEKIKSLRHSKPLEITFT 436
+ +ME + +A Y + LC + A+ +VEK KP + T+T
Sbjct: 509 IKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEK-----GCKPTKATYT 563
Query: 437 GLI 439
LI
Sbjct: 564 ILI 566
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 75/390 (19%), Positives = 142/390 (36%), Gaps = 94/390 (24%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L+ L D G ++AM VLD + D+ YT L+ +A+++ + M
Sbjct: 215 ILRSLCDSGKLKEAMEVLDRQMQRECYPDV---ITYTILIEATCNDSGVGQAMKLLDEMR 271
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV--LEPD 313
+ PD+ Y+ + + + G L E +K + M P+ +P+
Sbjct: 272 KK-GCKPDVVTYNVLINGICKEGRLDEAIKFLNNM-----------------PLYGCQPN 313
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR------------ 361
++ +N +L + + +W + + + G PS T+ + + R
Sbjct: 314 VITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLE 373
Query: 362 ------CL-----LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
C+ L+ F +E K++ A+ + M RG Y L LC +G
Sbjct: 374 KMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDG 433
Query: 411 RWQDAMLVVEKIKSLRHS----------------------------------KPLEITFT 436
+ A+ ++ ++ S S KP IT++
Sbjct: 434 KADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYS 493
Query: 437 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
L+ G +D+ I IF M+ +P+ T NA++ + S+A +
Sbjct: 494 TLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFL------ 547
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
Y G KP + TY+ ++E A
Sbjct: 548 ---AYMVEKG----CKPTKATYTILIEGIA 570
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 86/221 (38%), Gaps = 28/221 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L++ L + + + + M + G M LL G + +A+ L+ +
Sbjct: 354 ILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 413
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVG 278
D+ Y LL L K G+ A+ I N L + C+ P + Y++V L +VG
Sbjct: 414 GCYPDI---VTYNTLLTALCKDGKADAAVEILNQLSSKGCS--PVLITYNTVIDGLTKVG 468
Query: 279 LLKELVKLIERMRQKPSK---------------------RIKNMHRKNWDPVLEPDLVVY 317
+ +L+E MR+K K IK H + +P V Y
Sbjct: 469 KTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSI-KPSAVTY 527
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
NA++ + Q + + G KP+ ATY + +E
Sbjct: 528 NAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 148/348 (42%), Gaps = 51/348 (14%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
K GR +AL M +PD ++++ L + G +K +++++ M Q+
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE------ 324
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+DP D+ YN+V++ + K V Q+ P+ TY
Sbjct: 325 -----GYDP----DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY------- 368
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
L+ +E ++ EA R + +G++ + L LC + AM +
Sbjct: 369 -----NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSR 478
E+++S + +P E T+ LI S G +D+ +++ + M+ C ++ T N ++ + +
Sbjct: 424 EEMRS-KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 479 NDMFSKAKELFEE-----TTRANSSGYTFLSG--------DGAPL---------KPDEYT 516
+ +A+E+F+E +R + + T + G D A L KPD+YT
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
Y+S+L + + + M +GC+ D + L+ +AG+
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 139/340 (40%), Gaps = 41/340 (12%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIM-NQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
++ V+V + F++ M NQ G + L+ GL G + A+ ++D
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTL 274
+ L++ D + Y +++ L K G EA+ + + M+ DC+ P+ Y+++ TL
Sbjct: 321 M--LQEGYD-PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS--PNTVTYNTLISTL 375
Query: 275 GQVGLLKELVKLIERMRQKP--------SKRIKNM-----HRKNWDPV-------LEPDL 314
+ ++E +L + K + I+ + HR + EPD
Sbjct: 376 CKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDE 435
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
YN ++++ + + KQ+ SG S TY L+ F +
Sbjct: 436 FTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY------------NTLIDGFCKA 483
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
K EA ME GV + Y L LC + R +DA +++++ + KP + T
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM-IMEGQKPDKYT 542
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 473
+ L+ GG I I Q M + CEP+I T ++
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/430 (19%), Positives = 158/430 (36%), Gaps = 70/430 (16%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
++L LG GS+ +L+ +K R + L+ + E L + + M
Sbjct: 88 EILLRLGRSGSFDDMKKILE---DMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWM 144
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+++ L PD Y+ + L LK L+E I + W ++PD+
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLK----LVE---------ISHAKMSVWG--IKPDV 189
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY--------------- 359
+N ++ A +HQ + + + + GL P T+ M+ Y
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 360 --------RRCLLKVLVRAFWEEGKINEAVAAVRNM-EQRGVVGTASVYYELACCLCNNG 410
+ V+V F +EG++ +A+ ++ M Q G + L LC G
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
+ A+ +++ + + P T+ +I G + + + + M C PN T
Sbjct: 310 HVKHAIEIMDVMLQEGYD-PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368
Query: 470 NAMLKVYSRNDMFSKAKELFEETT------------------------RANSSGYTFLSG 505
N ++ + + +A EL T R + +
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
G +PDE+TY+ ++++ + + + + K M LSGC + L+ +A K
Sbjct: 429 KGC--EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 566 HLLEHAFDSL 575
E FD +
Sbjct: 487 REAEEIFDEM 496
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/501 (18%), Positives = 178/501 (35%), Gaps = 120/501 (23%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
KLL L ALR+FNL + N P+ A Y + + LG+ G ++ K++E M+
Sbjct: 51 VKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMK 110
Query: 292 QKPSKRIKN------------------MHRKNW---DPVLEPDLVVYNAVLNACVPSHQW 330
+ + + +W + L+PD YN +LN V +
Sbjct: 111 SSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSL 170
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
K V ++ G+KP +T+ VL++A ++ A+ + +M
Sbjct: 171 KLVEISHAKMSVWGIKPDVSTF------------NVLIKALCRAHQLRPAILMLEDMPSY 218
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
G+V P E TFT ++ ++ G +D
Sbjct: 219 GLV------------------------------------PDEKTFTTVMQGYIEEGDLDG 242
Query: 451 CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
+ I + M + C + +VN ++ + + A +E +N G+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM--SNQDGFF-------- 292
Query: 510 LKPDEYTYSSML----EASATAHQWEYFE-----------YVYKGMALSGCQLDQTKHAW 554
PD+YT+++++ +A H E + Y Y + C+L + K A
Sbjct: 293 --PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 555 LLVEASRAGKCHLLEHAFDSLLEA--------------------GEIPHPLFFTEMLIQA 594
+++ C +++L+ G +P F ++
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 595 IVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSE 654
+ N+ A+ L M E + L +S S+ KL++ LN L +
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS---LCSKGKLDEALNMLKQMELSGCA 467
Query: 655 ITVSNLSRALHALCRSEKERD 675
+V + + C++ K R+
Sbjct: 468 RSVITYNTLIDGFCKANKTRE 488
>gi|422293946|gb|EKU21246.1| hypothetical protein NGA_2092600 [Nannochloropsis gaditana CCMP526]
Length = 659
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 162/390 (41%), Gaps = 54/390 (13%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
+K G WR+A+ VL + + DL S + + LGKAG+ AL +F +E
Sbjct: 233 IKACGQARRWREALGVLREMQARGLRPDLVS---FNTAMDALGKAGQYDLALELFT-EIE 288
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLK---ELVKLIERMRQKPSKRIKN-----MHRKN-WD 307
D P++ +Y++ G+ G++ EL++ ++ + +P N +KN W
Sbjct: 289 DHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAKKNQWK 348
Query: 308 ------------PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
P ++PDL+ YN ++ C + +W+ + + GL+P +Y
Sbjct: 349 AALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVSYNTV 408
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG-RWQD 414
M + R G+ +A+ ME+ GV V + A CN +WQ
Sbjct: 409 MHACGRA------------GEYLQALDLFGMMEEVGVA-PDRVSFNTAMHACNRALKWQA 455
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAML 473
A+ ++ ++++ R P ++T + + G + + + + M+ P N+ T A +
Sbjct: 456 ALQILREMEA-RSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHTYTAAM 514
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
R + L EE DG ++P+ +Y+ ++A +W+
Sbjct: 515 DACCRGGAVDRVLVLLEEM-------------DGKGVEPNVVSYTIAMDAMNRVGKWDRA 561
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
V + M G +LD + L A RAG
Sbjct: 562 SAVLEQMVQRGLRLDSVSYRTALSTAGRAG 591
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/241 (18%), Positives = 100/241 (41%), Gaps = 38/241 (15%)
Query: 301 MHRKNWD--------PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
M R++W P++E D+V + + AC + +W+ V ++++ GL+P ++
Sbjct: 205 MRRRDWTRALTVLDAPLIEVDVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSF 264
Query: 353 GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
AM+ A + G+ + A+ +E G V Y A C
Sbjct: 265 NTAMD------------ALGKAGQYDLALELFTEIEDHGFAPNL-VSYNTAIHACGRAGM 311
Query: 413 QD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD--HCEPNIGTV 469
D A ++ +++ L +P +++ ++ + + + MK+ +P++ +
Sbjct: 312 VDRAHELLREMQGL-SVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEAPGVDPDLISY 370
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
N + V ++ + +A EL E G L+PD +Y++++ A A +
Sbjct: 371 NTAMHVCAKAGRWERATELLTEAL-------------GQGLQPDVVSYNTVMHACGRAGE 417
Query: 530 W 530
+
Sbjct: 418 Y 418
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 183/460 (39%), Gaps = 71/460 (15%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
FT G + L LG +A L + G+ + +Y ++ L G EA
Sbjct: 160 FTFGVAARALCRLG------RADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEA 213
Query: 248 LRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK---------- 296
+ N ++L C D+ + V + +G ++E +L++RM K
Sbjct: 214 ATLLNEMLLMGCAA--DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 271
Query: 297 ------RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R + R V E ++V++N V+ C+ + +++ + G +P A
Sbjct: 272 QGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAH 331
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY +L+ + G+I AV +R ME++G Y + C NG
Sbjct: 332 TY------------SILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNG 379
Query: 411 RWQDAMLVVEKIKSLRHSKPLEIT---FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
W D ++E++ +K L + + G+I + G +D+ + + Q M+ C P+I
Sbjct: 380 MWDDTRALLEEMS----AKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDI 435
Query: 467 GTVNAMLKVYSRNDMFSKAKELF----EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
+ N ++ N+ +A+ +F EE AN TY++++
Sbjct: 436 CSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG-----------------ITYNTIIH 478
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH----LLEHAFDSLLEA 578
A +W+ + K M L GC LD + L+ + G LLE + ++
Sbjct: 479 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 538
Query: 579 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 618
+ + + +E+ + V+ E + ++N AP +T
Sbjct: 539 NNVSYNILISELCKERRVRDALELSKQMLN-QGLAPDIVT 577
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 90/455 (19%), Positives = 165/455 (36%), Gaps = 60/455 (13%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ F + L + GR EAL + M PD Y +V L G + E L
Sbjct: 158 TTFTFGVAARALCRLGRADEALALLRGMARH-GCVPDAVLYQTVIHALCDQGGVTEAATL 216
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ M D+ ++ V+ + + + ++ G
Sbjct: 217 LNEMLLMGCAA---------------DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCM 261
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P TYG ++ R VR + +EA A + + + VV +V + CL
Sbjct: 262 PGVMTYGFLLQGLCR------VR------QADEARAMLGRVPELNVVLFNTV---IGGCL 306
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 465
G+ +A + E + L+ +P T++ L+ G I + + + M K PN
Sbjct: 307 AE-GKLAEATELYETM-GLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPN 364
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T +L + +N M+ + L EE + + G T + Y+ M+ A
Sbjct: 365 VVTYTIVLHSFCKNGMWDDTRALLEEMS---AKGLTL----------NSQGYNGMIYALC 411
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+ + + + M GC D + ++ + EH F++LLE G + + +
Sbjct: 412 KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 471
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF-----ESNEDRISRDKLEK 640
+ ++ + ++ AV L M + + L + N DR S LE+
Sbjct: 472 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR-SLVLLEE 530
Query: 641 LLNALCNCNAASSEITVSNLSRALHALCRSEKERD 675
+ N S I +S LC+ + RD
Sbjct: 531 MAEKGIKPNNVSYNILISE-------LCKERRVRD 558
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 150/368 (40%), Gaps = 32/368 (8%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+PDLV Y V+N F + ++ + L+P Y ++
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY------------NTIIDG 265
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ +++A+ + ME +G+ Y L CLCN GRW DA ++ + R P
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE-RKINP 324
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
TF+ LI + + G + + ++ M K +P+I T ++++ + +D +AK++F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
E S + F PD TY+++++ + E V++ M+ G +
Sbjct: 385 EFMV----SKHCF---------PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
+ L+ +AG C + + F ++ G P+ + + +L EKA+ +
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 610 MAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 669
+ + T + + E K+E + CN + + V + + CR
Sbjct: 492 LQRSKMEPTIYTYNIMIEG---MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Query: 670 --SEKERD 675
S++E D
Sbjct: 549 KGSKEEAD 556
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/421 (19%), Positives = 173/421 (41%), Gaps = 54/421 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL---KSRFVYTKLLAILGKAGRPHEALRIFN 252
+ K +G W++++ + ++ +R + + +YT ++++LG+ G + L +F+
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYM-----QRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFD 165
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
M + + +Y ++ G+ G + ++L++RM+ + + P
Sbjct: 166 EMPSQ-GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK---------------ISP 209
Query: 313 DLVVYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
++ YN V+NAC W+G+ +F ++R G++P TY L+ A
Sbjct: 210 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY------------NTLLSAC 257
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
G +EA R M G+V + Y L R + ++ ++ S S P
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS-GGSLPD 316
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
++ L+ + G I + + +F M+ C PN T + +L ++ ++ + ++LF
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E +N+ PD TY+ ++E ++ ++ M + D
Sbjct: 377 EMKSSNTD-------------PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINA 609
+ ++ + G + +P +T +I+A Q+ YE+A+ N
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTG-VIEAFGQAALYEEALVAFNT 482
Query: 610 M 610
M
Sbjct: 483 M 483
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 144/386 (37%), Gaps = 54/386 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL+ G EA +F M D + PD+ Y + T G++ L+++ L+
Sbjct: 249 TYNTLLSACAIRGLGDEAEMVFRTM-NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGE 307
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M S PD+ YN +L A S K VF Q++ +G P+A
Sbjct: 308 MASGGSL---------------PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNA 352
Query: 350 ATYGLAMESY---------RRCLLK--------------VLVRAFWEEGKINEAVAAVRN 386
TY + + + R+ L+ +L+ F E G E V +
Sbjct: 353 NTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
M + + Y + G +DA +++ + + P +TG+I +
Sbjct: 413 MVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTA-NDIVPSSKAYTGVIEAFGQAA 471
Query: 447 HIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
++ + F M + P+I T +++L ++R + +++ + L
Sbjct: 472 LYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSR-----------LVD 520
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
G P D T+++ +EA ++E Y M S C D+ +L S A
Sbjct: 521 SGIPRNRD--TFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLV 578
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEML 591
F+ + + +P + + ML
Sbjct: 579 DECREQFEEMKASDILPSIMCYCMML 604
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 142/376 (37%), Gaps = 56/376 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ GS ++AM V + ++ + Y+ LL + G++GR + ++F L +
Sbjct: 323 LLEAYAKSGSIKEAMGVF---HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF-LEM 378
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N PD A Y+ + G+ G KE+V L M ++ +EPD+
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN---------------IEPDME 423
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL----------- 364
Y ++ AC + + + + + + PS+ Y +E++ + L
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 365 ------------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
L+ +F G + E+ A + + G+ + G++
Sbjct: 484 HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKF 543
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 471
++A+ ++ R P E T ++ +D+C F+ MK P+I
Sbjct: 544 EEAVKTYVDMEKSR-CDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCM 602
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
ML VY + + + EL EE S + G + +Y S W+
Sbjct: 603 MLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQ---MIKGDYDDDS---------NWQ 650
Query: 532 YFEYVYKGMALSGCQL 547
EYV + GC L
Sbjct: 651 IVEYVLDKLNSEGCGL 666
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 96/245 (39%), Gaps = 34/245 (13%)
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
A V+ E A G WQ ++ + + ++ KP E +T +I G +D C+ +F
Sbjct: 109 ALVFKEFA----GRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVF 164
Query: 456 QHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE-------------TTRANSSGYT 501
M ++ + A++ Y RN + + EL + T N+
Sbjct: 165 DEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARG 224
Query: 502 FLSGDG----------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
L +G ++PD TY+++L A A + E V++ M G D T
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLE---AGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
++ L+ GK LE D L E G +P + +L + ++A+ + +
Sbjct: 285 YSHLV---ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 609 AMAYA 613
M A
Sbjct: 342 QMQAA 346
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 167/384 (43%), Gaps = 68/384 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL---KSRFVYTKLLAILGKAGRPHEALRIFN 252
+ K +G W++++ + ++ +R + + +YT ++++LG+ G ++ IF
Sbjct: 112 VFKEFAQRGDWQRSLRLFKYM-----QRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFE 166
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRK----- 304
M + + +Y ++ + G+ G + ++L+ERM+++ PS N
Sbjct: 167 EM-PTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARG 225
Query: 305 --NWDPVL-----------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
NW+ +L +PD++ YN +LNAC VF+ + + G+ P T
Sbjct: 226 GLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITT 285
Query: 352 YGLAMESYRRC--------LLK---------------VLVRAFWEEGKINEAVAAVRNME 388
Y +E++ + LLK VL+ A+ +G I A+ R M+
Sbjct: 286 YRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQ 345
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
+ V A Y L +GR+ D + ++K + +++P T+ LI +GG+
Sbjct: 346 EARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMK-VSNTEPDVGTYNVLIEVFGEGGYF 404
Query: 449 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
+ +++F M +++ EPN+GT ++ + + AK++ L D
Sbjct: 405 KEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKI-------------LLHMDE 451
Query: 508 APLKPDEYTYSSMLEASATAHQWE 531
+ P Y+ ++EA A +E
Sbjct: 452 KGIVPSTKAYTGVIEAYGQAASYE 475
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 161/422 (38%), Gaps = 56/422 (13%)
Query: 159 RVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG 218
R LV+ + K + ++ M SG + LL+ KG R AM V
Sbjct: 287 RNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQ--- 343
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+++ R + + Y+ LL + G GR + +F L ++ N PD+ Y+ + G+ G
Sbjct: 344 MQEARCVPNAVTYSMLLNLYGGHGRYDDVRELF-LEMKVSNTEPDVGTYNVLIEVFGEGG 402
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
KE+V L M ++ +EP++ Y ++ AC + +
Sbjct: 403 YFKEVVTLFHDMVEEN---------------VEPNMGTYEGLIYACGKGGLHEDAKKILL 447
Query: 339 QLRKSGLKPSAATYGLAMESYRRC-----------------------LLKVLVRAFWEEG 375
+ + G+ PS Y +E+Y + L+ F G
Sbjct: 448 HMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGG 507
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
E+ A + M + GV + + G++++A+ +++ R +P E TF
Sbjct: 508 LYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARF-QPDERTF 566
Query: 436 TGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
++ G +D+ F+ ++ P++ M+ VY+R++ + A E+ +E
Sbjct: 567 EAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMVT 626
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
S + G D+Y+ W+ EYV+ + GC L +
Sbjct: 627 NKVSNIHQVVGKMMKGDYDDYS------------NWQMVEYVFDKLNSEGCGLGMRFYNT 674
Query: 555 LL 556
LL
Sbjct: 675 LL 676
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 134/345 (38%), Gaps = 63/345 (18%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y LL G EA +F M E + PDI Y ++ T G++ L+++ +L++
Sbjct: 249 ITYNTLLNACANRGLGDEAEMVFRTMNEG-GMVPDITTYRNLVETFGKLNKLEKVSELLK 307
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M + PD+ YN +L A + VF+Q++++ P+
Sbjct: 308 EMESSGNL---------------PDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPN 352
Query: 349 AATYGLAMESY---------RRCLLK--------------VLVRAFWEEGKINEAVAAVR 385
A TY + + Y R L+ VL+ F E G E V
Sbjct: 353 AVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFH 412
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
+M + V Y L G +DA ++ + + P +TG+I +
Sbjct: 413 DMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDE-KGIVPSTKAYTGVIEAYGQA 471
Query: 446 GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS------ 498
++ + +F M + +P + T N+++ +++R ++ +++ + + + +
Sbjct: 472 ASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSF 531
Query: 499 -----GY-----------TFLSGDGAPLKPDEYTYSSMLEASATA 527
GY T++ + A +PDE T+ ++L TA
Sbjct: 532 NGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTA 576
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 101/231 (43%), Gaps = 16/231 (6%)
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
+ +++ EG + ++ M GV + Y L +G+++ ++ ++E++
Sbjct: 144 IYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERM 203
Query: 423 KSLRHSKPLEITFTGLIISSMDGG-HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRND 480
K + + P +T+ +I S GG + + +S+F M+ + +P+I T N +L +
Sbjct: 204 KKEKVT-PSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRG 262
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
+ +A+ +F N G + PD TY +++E ++ E + K M
Sbjct: 263 LGDEAEMVFRTM---NEGG----------MVPDITTYRNLVETFGKLNKLEKVSELLKEM 309
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
SG D + + LL + G F + EA +P+ + ++ +L
Sbjct: 310 ESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLL 360
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 81/199 (40%), Gaps = 28/199 (14%)
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG--GHIDDCISIFQHMKDHCEP-NI 466
G WQ ++ + + ++ KP E +T II S+ G G ++ IF+ M H P ++
Sbjct: 120 GDWQRSLRLFKYMQRQIWCKPNEHIYT--IIISLLGREGLLEKSTEIFEEMPTHGVPRSV 177
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEE-------------TTRANSSGYTFLSGDG------ 507
+ A++ Y R+ + + EL E T NS L+ +G
Sbjct: 178 FSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFA 237
Query: 508 ----APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
++PD TY+++L A A + E V++ M G D T + L+ +
Sbjct: 238 EMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLN 297
Query: 564 KCHLLEHAFDSLLEAGEIP 582
K + + +G +P
Sbjct: 298 KLEKVSELLKEMESSGNLP 316
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 183/460 (39%), Gaps = 71/460 (15%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
FT G + L LG +A L + G+ + +Y ++ L G EA
Sbjct: 176 FTFGVAARALCRLG------RADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEA 229
Query: 248 LRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK---------- 296
+ N ++L C D+ + V + +G ++E +L++RM K
Sbjct: 230 ATLLNEMLLMGCAA--DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 287
Query: 297 ------RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R + R V E ++V++N V+ C+ + +++ + G +P A
Sbjct: 288 QGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAH 347
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY +L+ + G+I AV +R ME++G Y + C NG
Sbjct: 348 TY------------SILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNG 395
Query: 411 RWQDAMLVVEKIKSLRHSKPLEIT---FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
W D ++E++ +K L + + G+I + G +D+ + + Q M+ C P+I
Sbjct: 396 MWDDTRALLEEMS----AKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDI 451
Query: 467 GTVNAMLKVYSRNDMFSKAKELF----EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
+ N ++ N+ +A+ +F EE AN TY++++
Sbjct: 452 CSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG-----------------ITYNTIIH 494
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH----LLEHAFDSLLEA 578
A +W+ + K M L GC LD + L+ + G LLE + ++
Sbjct: 495 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 554
Query: 579 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 618
+ + + +E+ + V+ E + ++N AP +T
Sbjct: 555 NNVSYNILISELCKERRVRDALELSKQMLN-QGLAPDIVT 593
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 90/455 (19%), Positives = 165/455 (36%), Gaps = 60/455 (13%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ F + L + GR EAL + M PD Y +V L G + E L
Sbjct: 174 TTFTFGVAARALCRLGRADEALALLRGMARH-GCVPDAVLYQTVIHALCDQGGVTEAATL 232
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ M D+ ++ V+ + + + ++ G
Sbjct: 233 LNEMLLMGCAA---------------DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCM 277
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P TYG ++ R VR + +EA A + + + VV +V + CL
Sbjct: 278 PGVMTYGFLLQGLCR------VR------QADEARAMLGRVPELNVVLFNTV---IGGCL 322
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 465
G+ +A + E + L+ +P T++ L+ G I + + + M K PN
Sbjct: 323 AE-GKLAEATELYETM-GLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPN 380
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T +L + +N M+ + L EE + + G T + Y+ M+ A
Sbjct: 381 VVTYTIVLHSFCKNGMWDDTRALLEEMS---AKGLTL----------NSQGYNGMIYALC 427
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+ + + + M GC D + ++ + EH F++LLE G + + +
Sbjct: 428 KDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGI 487
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF-----ESNEDRISRDKLEK 640
+ ++ + ++ AV L M + + L + N DR S LE+
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR-SLVLLEE 546
Query: 641 LLNALCNCNAASSEITVSNLSRALHALCRSEKERD 675
+ N S I +S LC+ + RD
Sbjct: 547 MAEKGIKPNNVSYNILISE-------LCKERRVRD 574
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/476 (19%), Positives = 193/476 (40%), Gaps = 60/476 (12%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
+R R + +L+ L + + M GL E +++G + G+
Sbjct: 197 RRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDG 256
Query: 209 AMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
A+ + + + YG + L+ K GR +AL + + PD
Sbjct: 257 ALRIKEQMVEYGCP-----CTDVTVNVLINGFCKQGRIDQALSFIQEAVSE-GFRPDQFT 310
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y+++ L ++G K +++++ M L+PD+ YN++++
Sbjct: 311 YNTLVNGLCKIGHAKHAMEVVDAMLLGG---------------LDPDIYTYNSLISGLCK 355
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRN 386
+ + + Q+ P+A TY ++ + +E +++EA R
Sbjct: 356 LGEIEEAVKILDQMVSRDCSPNAVTY------------NAIISSLCKENRVDEATEIARL 403
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
+ +G++ + L LC + + AM + E++K + +P E T+ LI S
Sbjct: 404 LTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKG-KGCRPDEFTYNMLIDSLCSSR 462
Query: 447 HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE-----TTRANSSGY 500
+++ +++ + M+ + C N+ N ++ + +N +A+E+F+E +R + +
Sbjct: 463 KLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYN 522
Query: 501 TFLSG--------DGAPL---------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
T + G D A L +PD++TY+S+L + + + M S
Sbjct: 523 TLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSS 582
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
GC D +A L+ +AG+ + S+ G + P + +IQA+ + N
Sbjct: 583 GCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNP-VIQALFKRN 637
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 109/548 (19%), Positives = 207/548 (37%), Gaps = 80/548 (14%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
FT Q+++ L+ D+ + A+ V +W K + S VY ++L LGKAG
Sbjct: 62 FTPKQLIETLRRQTDEVA---ALRVFNWAS--KQPNFVPSSSVYEEILRKLGKAGSFEYM 116
Query: 248 LRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM----RQKPSKRIKNM- 301
R+ M L C D + + G+ L E+V +++ M R KP R N+
Sbjct: 117 RRVLEEMKLSGCEF--DRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVL 174
Query: 302 ----------------HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
H + D+ +N ++ A +HQ + + +++ GL
Sbjct: 175 LNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGL 234
Query: 346 KPSAATYGLAMESY-----------------------RRCLLKVLVRAFWEEGKINEAVA 382
P T+ M+ Y + VL+ F ++G+I++A++
Sbjct: 235 SPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALS 294
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 442
++ G Y L LC G + AM VV+ + L P T+ LI
Sbjct: 295 FIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAML-LGGLDPDIYTYNSLISGL 353
Query: 443 MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN----- 496
G I++ + I M C PN T NA++ + + +A E+ T
Sbjct: 354 CKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDV 413
Query: 497 -----------------SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
S+ F G +PDE+TY+ ++++ ++ + E + K
Sbjct: 414 CTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKE 473
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
M L+GC + + L+ + + E FD + G + + ++
Sbjct: 474 MELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKR 533
Query: 600 YEKAVALINAMAYAPFHITERQWTELF----ESNEDRISRDKLEKLLNALCNCNAASSEI 655
E A L++ M + + L ++ + + + D ++ + ++ CN + +
Sbjct: 534 VEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYAT 593
Query: 656 TVSNLSRA 663
+S L +A
Sbjct: 594 LISGLCKA 601
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/430 (20%), Positives = 178/430 (41%), Gaps = 55/430 (12%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M + G T+ + L+ G +G QA+S + + D +F Y L+ L K
Sbjct: 264 MVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPD---QFTYNTLVNGLCK 320
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR--- 297
G A+ + + ML L PDI Y+S+ L ++G ++E VK++++M +
Sbjct: 321 IGHAKHAMEVVDAMLLG-GLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAV 379
Query: 298 -----IKNMHRKN-WDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
I ++ ++N D E PD+ +N+++ S K +F+++
Sbjct: 380 TYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEM 439
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
+ G +P TY + L+ + K+ EA+ ++ ME G +Y
Sbjct: 440 KGKGCRPDEFTYNM------------LIDSLCSSRKLEEALNLLKEMELNGCARNVVIYN 487
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMK 459
L C N R ++A + ++++ L+ +T+ LI ++D + Q +
Sbjct: 488 TLIDGFCKNKRIEEAEEIFDEME-LQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIM 546
Query: 460 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
+ P+ T N++L + + KA ++ + T SSG PD TY++
Sbjct: 547 EGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMT---SSG----------CNPDIVTYAT 593
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW--LLVEASRAGKCHLLEHAFDSLLE 577
++ A + + + + + + G L T HA+ ++ + + H F +L+
Sbjct: 594 LISGLCKAGRVQVASRLLRSIQMKGMVL--TPHAYNPVIQALFKRNRTHEAMRLFREMLD 651
Query: 578 AGEIPHPLFF 587
E P + +
Sbjct: 652 KSEPPDAITY 661
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/421 (18%), Positives = 174/421 (41%), Gaps = 54/421 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL---KSRFVYTKLLAILGKAGRPHEALRIFN 252
+ K +G W++++ + ++ +R + + +YT ++++LG+ G + L +F+
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYM-----QRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFD 165
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
M + + +Y ++ G+ G + ++L++RM+ + P
Sbjct: 166 EMPSQ-GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDK---------------ISP 209
Query: 313 DLVVYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
++ YN V+NAC W+G+ +F ++R G++P TY + + C ++
Sbjct: 210 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA---CAIR------ 260
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
G +EA R M G+V + Y L R + ++ ++ S S P
Sbjct: 261 ---GLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMAS-GGSLPD 316
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
++ L+ + G I + + +F M+ C PN T + +L ++ ++ + ++LF
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E +N+ PD TY+ ++E ++ ++ M + D
Sbjct: 377 EMKSSNTD-------------PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINA 609
+ ++ + G + +P +T +I+A Q+ YE+A+ N
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTG-VIEAFGQAALYEEALVAFNT 482
Query: 610 M 610
M
Sbjct: 483 M 483
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 144/386 (37%), Gaps = 54/386 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL+ G EA +F M D + PD+ Y + T G++ L+++ L+
Sbjct: 249 TYNTLLSACAIRGLGDEAEMVFRTM-NDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSE 307
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M S PD+ YN +L A S K VF Q++ +G P+A
Sbjct: 308 MASGGSL---------------PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNA 352
Query: 350 ATYGLAMESY---------RRCLLK--------------VLVRAFWEEGKINEAVAAVRN 386
TY + + + R+ L+ +L+ F E G E V +
Sbjct: 353 NTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
M + + Y + G +DA +++ + + P +TG+I +
Sbjct: 413 MVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTA-NDIVPSSKAYTGVIEAFGQAA 471
Query: 447 HIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
++ + F M + P+I T +++L ++R + +++ + L
Sbjct: 472 LYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSR-----------LVD 520
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
G P D T+++ +EA ++E Y M S C D+ +L S A
Sbjct: 521 SGIPRNRD--TFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLV 578
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEML 591
F+ + + +P + + ML
Sbjct: 579 DECREQFEEMKASDILPSIMCYCMML 604
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 142/376 (37%), Gaps = 56/376 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ GS ++AM V + ++ + Y+ LL + G++GR + ++F L +
Sbjct: 323 LLEAYAKSGSIKEAMGVF---HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF-LEM 378
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N PD A Y+ + G+ G KE+V L M ++ +EPD+
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN---------------IEPDME 423
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL----------- 364
Y ++ AC + + + + + + PS+ Y +E++ + L
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 365 ------------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
L+ +F G + E+ A + + G+ + G++
Sbjct: 484 HEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKF 543
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 471
++A+ ++ R P E T ++ +D+C F+ MK P+I
Sbjct: 544 EEAVKTYVDMEKSR-CDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCM 602
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
ML VY + + + EL EE S + G + +Y S W+
Sbjct: 603 MLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQ---MIKGDYDDDS---------NWQ 650
Query: 532 YFEYVYKGMALSGCQL 547
EYV + GC L
Sbjct: 651 IVEYVLDKLNSEGCGL 666
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 96/245 (39%), Gaps = 34/245 (13%)
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
A V+ E A G WQ ++ + + ++ KP E +T +I G +D C+ +F
Sbjct: 109 ALVFKEFA----GRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVF 164
Query: 456 QHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE-------------TTRANSSGYT 501
M ++ + A++ Y RN + + EL + T N+
Sbjct: 165 DEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARG 224
Query: 502 FLSGDG----------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
L +G ++PD TY+++L A A + E V++ M G D T
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLE---AGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
++ L+ GK LE D L E G +P + +L + ++A+ + +
Sbjct: 285 YSHLV---ETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 609 AMAYA 613
M A
Sbjct: 342 QMQAA 346
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 156/371 (42%), Gaps = 55/371 (14%)
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
+ L V +K K + F YT+L+ LGK GR +A +F ML+D PD+ +++
Sbjct: 283 AALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKD-GCKPDVVLINNL 341
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH-- 328
LG+ G L++ +KL +M P++V YN V+ A S
Sbjct: 342 INILGRAGRLEDALKLFGKMDSLQCA---------------PNVVTYNTVIKAIFESKAP 386
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ W F++++ +G+ PS+ TY +L+ F + ++ +A+ + M+
Sbjct: 387 ASEAALW-FEKMKANGIAPSSFTYA------------ILIDGFCKTNRVEKALLLLEEMD 433
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
++G + Y L L R++ A + +++K + + +I + G +
Sbjct: 434 EKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKE-NCGRSSARVYAVMIKHFGNCGRL 492
Query: 449 DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE-----TTRANSSGYTF 502
D + +F MK C P++ T NA++ R M +A L T S
Sbjct: 493 SDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNII 552
Query: 503 LSG---DGAP--------------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
L+G G P + PD +Y+++L + A +E + + M L G
Sbjct: 553 LNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGF 612
Query: 546 QLDQTKHAWLL 556
+ D ++ +L
Sbjct: 613 EYDSITYSSIL 623
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 102/560 (18%), Positives = 213/560 (38%), Gaps = 89/560 (15%)
Query: 127 VLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSG 185
VLD DV++ + + +W +++ ++ ++ L+ L E + + W+ ++ M +S
Sbjct: 97 VLDIDVEIRAKI--QFFKWAGKRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSP 154
Query: 186 LMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH 245
+ ++LK LG +A+SV Y +K ++ + VY L+ +L G
Sbjct: 155 CSVGPAEWSEILKILGKAKMVNKALSVF---YQIKGRKCNPTATVYNTLILMLMHEGHHE 211
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRI---- 298
+ ++N + + N PD Y ++ G++ +L + M++ P+++I
Sbjct: 212 KIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTI 271
Query: 299 -----------------KNMHRKNWDPVL------------------------------- 310
+ M K P +
Sbjct: 272 LAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGC 331
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+PD+V+ N ++N + + + +F ++ P+ TY +++A
Sbjct: 332 KPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYN------------TVIKA 379
Query: 371 FWE-EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+E + +EA M+ G+ ++ Y L C R + A+L++E++ +
Sbjct: 380 IFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDE-KGFP 438
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKEL 488
P + LI S + +FQ +K++C + V A M+K + S A +L
Sbjct: 439 PCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDL 498
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F E + S PD YTY++++ A + + + M +GC D
Sbjct: 499 FCEMKKLGCS-------------PDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPD 545
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
H +L ++ G F + E+ +P + + +L +E A L+
Sbjct: 546 IKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMR 605
Query: 609 AMAYAPFHITERQWTELFES 628
M F ++ + E+
Sbjct: 606 EMKLKGFEYDSITYSSILEA 625
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 98/478 (20%), Positives = 188/478 (39%), Gaps = 68/478 (14%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
+S F Y ++ L K G A +F M ++ PDI Y+S+ G++GLL E +
Sbjct: 54 RSVFTYNIMIDYLCKEGDLEMARSLFTQM-KEAGFTPDIVTYNSLIDGHGKLGLLDECIC 112
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ E+M+ D +PD++ YNA++N + F +++ +GL
Sbjct: 113 IFEQMK---------------DADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL 157
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
KP+ TY + AF +EG + EA+ +M + + Y L
Sbjct: 158 KPNVVTY------------STFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA 205
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHMKD-HCE 463
C G +A+ +VE+I L+ L +T+T L+ + G + + +F+ M +
Sbjct: 206 NCKAGNLAEALKLVEEI--LQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVA 263
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
PN T A++ + + AK++ +E +KPD Y ++L
Sbjct: 264 PNQETYTALVHGFIKAKEMEYAKDILKEMKE-------------KCIKPDLLLYGTILWG 310
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC----HLLEHA-------- 571
+ E + + + SG + + L+ ++G+ LLE
Sbjct: 311 LCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLC 370
Query: 572 -----------FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 620
FD +L+ G +P + +T ++ + N ++A+ L + M +
Sbjct: 371 KNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLH 430
Query: 621 QWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSS 678
+T L K LL+ + E+ L + +AL + ++ +L +
Sbjct: 431 AYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQN 488
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 159/381 (41%), Gaps = 45/381 (11%)
Query: 214 DWVYGLKDKRDLKSR---FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
D V + R LK R YT L+ L +A RP AL + M ++ + + ++
Sbjct: 28 DAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQM-QEVGYEVGVHLFTTL 86
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
L + G + + + L++ ++ LEPD+V+YN ++ +
Sbjct: 87 VRALAREGQVADALALVDEVK---------------GSCLEPDIVLYNVCIDCFGKAGNV 131
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
F +L+ GLKP +Y ++ VL +A G++ EA ME
Sbjct: 132 DMACKFFHELKAQGLKPDDVSY--------TSMIWVLCKA----GRLGEAEELFAQMEAE 179
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
V A Y + + GR++DA ++E+++ R P ++F ++ +D+
Sbjct: 180 RSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRE-RGCIPSVVSFNSILTCLGKKRKVDE 238
Query: 451 CISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 510
+S+F+ MK EPN T N ++ + +A + +E A+ L
Sbjct: 239 ALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHAS-------------L 285
Query: 511 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 570
P+ T + M++ A + E +++ + GC D + L+ + G+
Sbjct: 286 FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYR 345
Query: 571 AFDSLLEAGEIPHPLFFTEML 591
F+ +L+AG +P+ +T ++
Sbjct: 346 LFEKMLDAGHNANPVVYTSLI 366
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 94/473 (19%), Positives = 183/473 (38%), Gaps = 87/473 (18%)
Query: 150 RWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQA 209
++R A VL+ L+E + + +R M + G L++ L +G A
Sbjct: 40 KFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADA 99
Query: 210 MSVLDWV------------------YGLKDKRDLKSRFV--------------YTKLLAI 237
++++D V +G D+ +F YT ++ +
Sbjct: 100 LALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWV 159
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L KAGR EA +F M + ++ P AY+++ + G G ++ KL+ER+R++
Sbjct: 160 LCKAGRLGEAEELFAQMEAERSV-PCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCI- 217
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM- 356
P +V +N++L + +F+ ++K +P+++TY + +
Sbjct: 218 --------------PSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIID 262
Query: 357 ---------ESYR-------------RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
E+YR + ++V + K+ EA + QRG
Sbjct: 263 MLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNP 322
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
Y L L G+ +A + EK+ H+ + +T LI + G +D +
Sbjct: 323 DCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN-PVVYTSLIRNFFIHGRKEDGHKV 381
Query: 455 FQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 513
F+ + + C+P++ +N + + K + +FE+ Y FL PD
Sbjct: 382 FKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDI-----RSYGFL--------PD 428
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
+YS ++ A Q ++ M G LD + ++ ++GK H
Sbjct: 429 VRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 481
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 138/315 (43%), Gaps = 39/315 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G R+ ++ + +K + Y ++ K+G+ H+A I M
Sbjct: 435 LIHGLTKAGQARETSNIF---HAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 491
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E C + P +A Y ++ L ++ L E L E + K +E ++V
Sbjct: 492 EKC-VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKG---------------IELNVV 535
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+Y+++++ + + + +++ K GL P+ T+ LL LV+A EE
Sbjct: 536 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTW--------NSLLDALVKA--EE- 584
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
INEA+ ++M++ Y L LC ++ A + + ++ + P +T+
Sbjct: 585 -INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQK-QGLVPNVVTY 642
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETT- 493
T +I G+I D S+F+ K + P+ + NA+++ S + +A E ++ T
Sbjct: 643 TTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNAN---RAMEAYQTTVY 699
Query: 494 --RANSSGYTFLSGD 506
++S + FL D
Sbjct: 700 QLSSSSCSWNFLVPD 714
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 102/249 (40%), Gaps = 19/249 (7%)
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
L LVRA ++++AV AV M + S Y L L R + A+ ++ ++
Sbjct: 16 LAAALVRA----RRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQM 71
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDM 481
+ + + + + FT L+ + G + D +++ +K C EP+I N + + +
Sbjct: 72 QEVGYEVGVHL-FTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGN 130
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
A + F E L G LKPD+ +Y+SM+ A + E ++ M
Sbjct: 131 VDMACKFFHE-----------LKAQG--LKPDDVSYTSMIWVLCKAGRLGEAEELFAQME 177
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 601
+ +++ AG+ + L E G IP + F +L + +
Sbjct: 178 AERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 237
Query: 602 KAVALINAM 610
+A++L M
Sbjct: 238 EALSLFEVM 246
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 97/458 (21%), Positives = 190/458 (41%), Gaps = 70/458 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL---KSRFVYTKLLAILGKAGRPHEALRIFN 252
+ K +G W++++ + ++ +R + + +YT ++++LG+ G + IF+
Sbjct: 118 VFKEFAARGDWQRSLRLFKYM-----QRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFD 172
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM-RQKPSKRIKNMHRK------- 304
M + + +Y ++ G+ G + ++L+ERM R++ S I +
Sbjct: 173 EMASQ-GVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARG 231
Query: 305 --NWDPVL-----------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+W+ +L +PDLV YN +L+AC VFK + + G+ P T
Sbjct: 232 DLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITT 291
Query: 352 YGLAMESYRRC--------LLK---------------VLVRAFWEEGKINEAVAAVRNME 388
Y +E++ + LLK VL+ A + G I EA+ + M+
Sbjct: 292 YSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQ 351
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
G V AS Y L +GR+ D + ++K ++P T+ LI +GG+
Sbjct: 352 AAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKE-SSAEPDATTYNILIRVFGEGGYF 410
Query: 449 DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
+ +++F + D + +PN+ T ++ + + AK++ +G
Sbjct: 411 KEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKI-------------LFHMNG 457
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
+ P YS ++EA A ++ + M G + + L+ +R G
Sbjct: 458 KGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKE 517
Query: 568 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAV 604
E + E G + F+ +I+ QS YE+A+
Sbjct: 518 FEAILSRMREYGISRNAKSFSG-IIEGYRQSGQYEEAI 554
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/389 (19%), Positives = 142/389 (36%), Gaps = 80/389 (20%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
GS ++AM V ++ + + Y+ LL + GK GR + +F L +++ + PD
Sbjct: 338 GSIKEAMDVFKQ---MQAAGCVPNASTYSILLNLYGKHGRYDDVRELF-LQMKESSAEPD 393
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
Y+ + G+ G KE+V L + D ++P++ Y ++ A
Sbjct: 394 ATTYNILIRVFGEGGYFKEVVTLFHDLV---------------DENIDPNMETYEGLVFA 438
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
C + + + G+ PS+ Y +E+Y + L +EA+ A
Sbjct: 439 CGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAAL------------YDEALVA 486
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 443
M + G T Y L G +++ ++ +++ S+ + +F+G+I
Sbjct: 487 FNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAK-SFSGIIEGYR 545
Query: 444 DGGHIDDCISIFQHM-KDHCE-----------------------------------PNIG 467
G ++ I F M K CE P++
Sbjct: 546 QSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVL 605
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
ML VY++N + A EL +E + S + G + +Y S
Sbjct: 606 CYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIGQ---MIKGDYDDDS-------- 654
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
W+ EYV+ + GC + LL
Sbjct: 655 -NWQMVEYVFDKLNAEGCGFGMRFYNTLL 682
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/409 (18%), Positives = 164/409 (40%), Gaps = 45/409 (11%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD ++++ L + E V L+ RM + +P++V YN+++
Sbjct: 133 PDTTTFNTLINGLCLESKVSEAVVLVARMVENGC---------------QPNVVTYNSIV 177
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
N S + +++ + +K TY ++S R +G I+ A+
Sbjct: 178 NGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCR------------DGCIDAAI 225
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
+ + ME +G+ + Y L LC G+W D + +++ + S R P ITF LI
Sbjct: 226 SLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTS-RKIIPNVITFNVLIDV 284
Query: 442 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
+ G + + +++ M PN T N+++ Y + S+A + + R N S
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCS-- 342
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
PD T++S+++ + + +++ ++ G + ++ L+
Sbjct: 343 -----------PDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFC 391
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 620
++GK + E F ++ G +P + + +L EKA+ + + + ++
Sbjct: 392 QSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIV 451
Query: 621 QWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 669
+T + E K+E N C+ + V + + LC+
Sbjct: 452 MYTIIIEG---MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 497
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 39/292 (13%)
Query: 304 KNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ W+P++ PD++ YN +++A Q ++ L ++ P+ T
Sbjct: 143 RQWEPIITVCEWILYRSSFRPDIICYNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDT 202
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y L L+RA+ G+++ A + M++ G+ TA+VY L
Sbjct: 203 YAL------------LLRAYCNSGQLHRAEGVISEMQKNGLPPTATVYNAYLDGLLKARC 250
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 470
+ A+ V +++K R E T+T +I + +F MK C+PNI T
Sbjct: 251 SEKAVEVYQRMKKERCRTNTE-TYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYT 309
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
A++ ++R + KA+E+FEE +A +PD Y Y++++EA + A
Sbjct: 310 ALVNAFAREGLCEKAEEVFEEMQQAGH-------------EPDVYAYNALMEAYSRAGLP 356
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ ++ M GC+ D+ + L+ RAG E AF L + G P
Sbjct: 357 QGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRP 408
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 137/353 (38%), Gaps = 56/353 (15%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K +R + YT ++ + GKA +P +L++FN M + P+I Y ++ + G
Sbjct: 261 MKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEM-KTIGCKPNICTYTALVNAFAREG 319
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
L ++ ++ E M+Q EPD+ YNA++ A + +G +F
Sbjct: 320 LCEKAEEVFEEMQQAGH---------------EPDVYAYNALMEAYSRAGLPQGASEIFS 364
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
+ G +P A+Y +LV A+ G EA AA + ++Q+G+ T
Sbjct: 365 LMEHMGCEPDRASY------------NILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKS 412
Query: 399 YYELACCLCNNG---RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
+ L +G R ++ M + K LR P ++ + G +DD +
Sbjct: 413 HMLLLSAHAKSGNVARCEEVMAQLHK-SGLR---PDTFALNAMLNAYGRAGRLDDMERLL 468
Query: 456 QHMK--------DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
M+ P+ T N ++ VY R + + F +
Sbjct: 469 GAMERGGDDDAGGGAAPDTSTYNVLVNVYGRAGYLDRMEAAFRALAARGLA--------- 519
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
D T++S + A A ++ +++ M +GC D LL S
Sbjct: 520 ----ADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYPDAGTAKVLLAACS 568
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 97/458 (21%), Positives = 190/458 (41%), Gaps = 70/458 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL---KSRFVYTKLLAILGKAGRPHEALRIFN 252
+ K +G W++++ + ++ +R + + +YT ++++LG+ G + IF+
Sbjct: 118 VFKEFAARGDWQRSLRLFKYM-----QRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFD 172
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM-RQKPSKRIKNMHRK------- 304
M + + +Y ++ G+ G + ++L+ERM R++ S I +
Sbjct: 173 EMASQ-GVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARG 231
Query: 305 --NWDPVL-----------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+W+ +L +PDLV YN +L+AC VFK + + G+ P T
Sbjct: 232 DLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITT 291
Query: 352 YGLAMESYRRC--------LLK---------------VLVRAFWEEGKINEAVAAVRNME 388
Y +E++ + LLK VL+ A + G I EA+ + M+
Sbjct: 292 YSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQ 351
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
G V AS Y L +GR+ D + ++K ++P T+ LI +GG+
Sbjct: 352 AAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKE-SSAEPDATTYNILIRVFGEGGYF 410
Query: 449 DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
+ +++F + D + +PN+ T ++ + + AK++ +G
Sbjct: 411 KEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKI-------------LFHMNG 457
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
+ P YS ++EA A ++ + M G + + L+ +R G
Sbjct: 458 KGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKE 517
Query: 568 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAV 604
E + E G + F+ +I+ QS YE+A+
Sbjct: 518 FEAILSRMREYGISRNAKSFSG-IIEGYRQSGQYEEAI 554
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/389 (19%), Positives = 142/389 (36%), Gaps = 80/389 (20%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
GS ++AM V ++ + + Y+ LL + GK GR + +F L +++ + PD
Sbjct: 338 GSIKEAMDVFKQ---MQAAGCVPNASTYSILLNLYGKHGRYDDVRELF-LQMKESSAEPD 393
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
Y+ + G+ G KE+V L + D ++P++ Y ++ A
Sbjct: 394 ATTYNILIRVFGEGGYFKEVVTLFHDLV---------------DENIDPNMETYEGLVFA 438
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
C + + + G+ PS+ Y +E+Y + L +EA+ A
Sbjct: 439 CGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAAL------------YDEALVA 486
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 443
M + G T Y L G +++ ++ +++ S+ + +F+G+I
Sbjct: 487 FNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAK-SFSGIIEGYR 545
Query: 444 DGGHIDDCISIFQHM-KDHCE-----------------------------------PNIG 467
G ++ I F M K CE P++
Sbjct: 546 QSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVL 605
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
ML VY++N + A EL +E + S + G + +Y S
Sbjct: 606 CYCMMLAVYAKNGRWDDASELLDEMIKTRVSSIHQVIGQ---MIKGDYDDDS-------- 654
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
W+ EYV+ + GC + LL
Sbjct: 655 -NWQMVEYVFDKLNAEGCGFGMRFYNTLL 682
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 166/372 (44%), Gaps = 61/372 (16%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
L+ V+ ++ +R + + + YT+L+ LGK+GR +A ++ ML+D PD+ +++
Sbjct: 286 LNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKD-GCKPDVVLMNNLIN 344
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV-----PS 327
LG+ LKE V+L E M R+ N P++V YN ++ + PS
Sbjct: 345 ILGRSDRLKEAVELFEEM------RLLN---------CTPNVVTYNTIIKSLFEDKAPPS 389
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
W+ ++++K G+ PS+ TY +L+ F + ++ +A+ + M
Sbjct: 390 EASS---WL-ERMKKDGVVPSSFTYS------------ILIDGFCKTNRVEKALLLLEEM 433
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+++G + Y L L R++ A + +++K S + + + +I G
Sbjct: 434 DEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRV-YAVMIKHFGKCGR 492
Query: 448 IDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFE--ETTRAN---SSGYT 501
++ + +F MK C P++ NA++ R DM +A LF E N +S
Sbjct: 493 FNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNI 552
Query: 502 FLSG---DGAP--------------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
L+G G P +KPD +Y+++L + A +E + K M G
Sbjct: 553 ILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKG 612
Query: 545 CQLDQTKHAWLL 556
+ D ++ +L
Sbjct: 613 FEYDLITYSSIL 624
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/555 (18%), Positives = 220/555 (39%), Gaps = 71/555 (12%)
Query: 128 LDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL 186
+D +V + +F +W +KR + ++ L+ L E + + W+ ++ M +S
Sbjct: 101 IDVEVHVKIQFF----KWAGKKRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPC 156
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
++ +++K LG +A+S+ Y +K ++ + Y ++ +L + G +
Sbjct: 157 AIGPSELSEIVKILGRVKMVNKALSIF---YQVKGRKCRPTAGTYNSVILMLMQEGHHEK 213
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHR 303
++N M + + +PD Y ++ G++ V+L + M++ +P+ +I
Sbjct: 214 VHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLM 273
Query: 304 KNW---DPVLEPDLVVYNAVLNACVP--------------SHQWKGVFWVFKQLRKSGLK 346
+ V E +V+ + CVP S + + + V+K + K G K
Sbjct: 274 GIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCK 333
Query: 347 PSAATYGLAMESYRR------------------CLLKV-----LVRAFWEE-GKINEAVA 382
P + R C V ++++ +E+ +EA +
Sbjct: 334 PDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASS 393
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 442
+ M++ GVV ++ Y L C R + A+L++E++ + P + LI S
Sbjct: 394 WLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDE-KGFPPCPAAYCSLINSL 452
Query: 443 MDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
+ +FQ +K++C ++ M+K + + F++A LF E +
Sbjct: 453 GKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCI--- 509
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
PD Y Y++++ A + +++ M +GC D H +L +R
Sbjct: 510 ----------PDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLAR 559
Query: 562 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 621
G F + + P + + +L +E+A L+ M F
Sbjct: 560 TGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLIT 619
Query: 622 WTELFES----NEDR 632
++ + E+ +EDR
Sbjct: 620 YSSILEAVGKVDEDR 634
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 184/426 (43%), Gaps = 63/426 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ LG++G W +A+ ++ + +R+ + + + +++ILG+ G+ A +F L
Sbjct: 154 LLRELGNRGEWAKAIRCFEFAVRREQRRNEQGKLA-SAMISILGRLGQVELAKNVFETAL 212
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + A+ ++ G+ G E +K+ E M+ L+P+LV
Sbjct: 213 NE-GYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSG---------------LKPNLV 256
Query: 316 VYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR-AFWE 373
YNAV++AC + +F ++ ++G++P T+ LL V R WE
Sbjct: 257 TYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITF--------NSLLAVCGRGGLWE 308
Query: 374 EGKINEAVAAVRN----MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
A RN M RG+ Y L +C G+ A ++ ++ +H
Sbjct: 309 ---------AARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPR-KHIM 358
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIG----TVNAMLKVYSRNDMFSKA 485
P +T++ +I G +D+ +++F MK +IG + N +L +Y++ F +A
Sbjct: 359 PNVVTYSTVIDGYAKAGRLDEALNLFNEMK---FASIGLDRVSYNTLLSIYAKLGRFEEA 415
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+ +E SSG +K D TY+++L ++E + V++ M
Sbjct: 416 LNVCKEM---ESSG----------IKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERI 462
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAV 604
+ ++ L+ S+ G F +AG + + LI A+ ++ E AV
Sbjct: 463 FPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAG-LKADVVLYSALIDALCKNGLVESAV 521
Query: 605 ALINAM 610
+ ++ M
Sbjct: 522 SFLDEM 527
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 159/371 (42%), Gaps = 50/371 (13%)
Query: 155 AEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
A A+ ++ RL + E+ AKN F +N+ G T L+ G G +A+ V +
Sbjct: 188 ASAMISILGRLGQVEL-AKN-VFETALNE-GYGNTVYAFSALISAYGRSGYCDEAIKVFE 244
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRP-HEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+ K +L Y ++ GK G + A IF+ ML + + PD ++S+
Sbjct: 245 TMKSSGLKPNL---VTYNAVIDACGKGGVDFNRAAEIFDEMLRN-GVQPDRITFNSLLAV 300
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
G+ GL + L M ++R +E D+ YN +L+A Q
Sbjct: 301 CGRGGLWEAARNLFSEM----------LYRG-----IEQDIFTYNTLLDAVCKGGQMDLA 345
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
F + ++ + + P+ TY ++ Y + G+++EA+ M+ +
Sbjct: 346 FQIMSEMPRKHIMPNVVTYSTVIDGYAKA------------GRLDEALNLFNEMKFASIG 393
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
Y L GR+++A+ V ++++S K +T+ L+ G ++
Sbjct: 394 LDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKD-AVTYNALLGGYGKQGKYEEVKR 452
Query: 454 IFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
+F+ MK + PN+ T + ++ VYS+ ++ +A E+F E +A LK
Sbjct: 453 VFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAG-------------LKA 499
Query: 513 DEYTYSSMLEA 523
D YS++++A
Sbjct: 500 DVVLYSALIDA 510
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 82/194 (42%), Gaps = 15/194 (7%)
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM-FSKAKELFEET 492
F+ LI + G+ D+ I +F+ MK +PN+ T NA++ + + F++A E+F+E
Sbjct: 223 FSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEM 282
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
R ++PD T++S+L WE ++ M G + D +
Sbjct: 283 LRNG-------------VQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTY 329
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 612
LL + G+ L + +P+ + ++ ++ ++A+ L N M +
Sbjct: 330 NTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKF 389
Query: 613 APFHITERQWTELF 626
A + + L
Sbjct: 390 ASIGLDRVSYNTLL 403
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ ++ KAGR EAL +FN M + ++ D +Y+++ ++G +E + + +
Sbjct: 363 TYSTVIDGYAKAGRLDEALNLFNEM-KFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKE 421
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K+ D V YNA+L +++ V VF++++ + P+
Sbjct: 422 MESSGIKK---------------DAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNL 466
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L+ + + G EA+ R ++ G+ +Y L LC N
Sbjct: 467 LTY------------STLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKN 514
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
G + A+ ++++ +P +T+ +I
Sbjct: 515 GLVESAVSFLDEMTK-EGIRPNVVTYNSII 543
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 53/289 (18%), Positives = 123/289 (42%), Gaps = 33/289 (11%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
K Y LL GK G+ E R+F M + ++P++ Y ++ + GL +E ++
Sbjct: 429 KDAVTYNALLGGYGKQGKYEEVKRVFEEMKAE-RIFPNLLTYSTLIDVYSKGGLYQEAME 487
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ ++ L+ D+V+Y+A+++A + + ++ K G+
Sbjct: 488 VFREFKKAG---------------LKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGI 532
Query: 346 KPSAATYGLAMESYRRC-LLKVLVRAFWEEGKINEAVAAVRNME--QRGVVG------TA 396
+P+ TY ++++ R + ++ +E + ++++ +E VG
Sbjct: 533 RPNVVTYNSIIDAFGRSGSAECVIDPPYETNVSKMSSSSLKVVEDATESEVGDKEDNQII 592
Query: 397 SVYYELA----CCLCNNGRWQDAMLVVEKIKSLRHS---KPLEITFTGLIISSMDGGHID 449
++ +LA C R + +L + + H KP +TF+ ++ + +
Sbjct: 593 KIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFE 652
Query: 450 DCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
D + + ++ G + +L Y N ++ +A+ LF+E + +SS
Sbjct: 653 DASMLLEELRLFDNQVYGVAHGLLMGYGDN-VWVQAQSLFDEVKQMDSS 700
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 39/292 (13%)
Query: 304 KNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ W+P++ PD++ YN +++A Q + L ++ P+ T
Sbjct: 150 RQWEPIITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDT 209
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y L L+RA+ G+++ A + M++ G+ TA+VY L
Sbjct: 210 YAL------------LLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARC 257
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 470
+ A+ V +++K R E T+T +I + +F+ MK C+PNI T
Sbjct: 258 SEKAVEVYQRMKKERCRTNTE-TYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYT 316
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
A++ ++R + KA+E+FEE +A +PD Y Y++++EA + A
Sbjct: 317 ALVNAFAREGLCEKAEEVFEEMQQAGH-------------EPDVYAYNALMEAYSRAGLP 363
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ ++ M GC+ D+ + L+ RAG E AF L + G P
Sbjct: 364 QGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRP 415
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 147/394 (37%), Gaps = 76/394 (19%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K +R + YT ++ + GKA +P +LR+F M + P+I Y ++ + G
Sbjct: 268 MKKERCRTNTETYTLMINVYGKANQPMSSLRVFREM-KSVGCKPNICTYTALVNAFAREG 326
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
L ++ ++ E M+Q EPD+ YNA++ A + +G +F
Sbjct: 327 LCEKAEEVFEEMQQAGH---------------EPDVYAYNALMEAYSRAGLPQGASEIFS 371
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
+ G +P A+Y +LV AF G EA AA + ++Q+G+
Sbjct: 372 LMEHMGCEPDRASY------------NILVDAFGRAGLHQEAEAAFQELKQQGM------ 413
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
+P + L+ + G++ C + +
Sbjct: 414 ------------------------------RPTMKSHMLLLSAHARSGNVARCEEVMAQL 443
Query: 459 -KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA-PLKPDEYT 516
K P+ +NAML Y R + LF R GDGA PD T
Sbjct: 444 HKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMER----------GDGAIAGAPDTST 493
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
Y+ M+ A A + E ++ +A G D + +R + F+ ++
Sbjct: 494 YNVMVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMV 553
Query: 577 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+AG P +L + E+ A++ +M
Sbjct: 554 DAGCYPDAGTAKVLLAACSDERQVEQVKAIVRSM 587
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 185/455 (40%), Gaps = 52/455 (11%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
V +D L + E ++ ++ M++ + T L+ GL G +AM++L+ +
Sbjct: 81 VFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEK 140
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ LK+ YT ++ L KAGR EA RIF ML + PD Y ++ L ++G
Sbjct: 141 GNSPTLKT---YTVVIDGLSKAGRVEEARRIFVDMLGN-GCRPDAFVYTALISGLAKIGK 196
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L E + + +M + R +EPD+V++N V+ S + F +
Sbjct: 197 LDEALVYLNQMVENGCAR-----------GVEPDVVIHNLVIRQLCASGNLEDALAYFDE 245
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
L S L + T+ LV A + + EA+A V+ M +R T Y
Sbjct: 246 LDDS-LDLTHFTF------------NPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTY 292
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
L GR +A+L +++ R P +T+T +I G +++ F M+
Sbjct: 293 TSLVDGFLKLGRLDEALLQLKEAVE-RGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 351
Query: 460 DHC-EPNIGTVNAMLKVYSRNDMFSKA----KELFEETTRANSSGY-------------- 500
+ EP+ T A++ + + M KA +++ + T ++ Y
Sbjct: 352 NRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVA 411
Query: 501 ----TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
TFL+ + TYS++++ + +++ M GC+ + + ++
Sbjct: 412 EAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIII 471
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
RAGK F+ LL+ P F L
Sbjct: 472 RGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFL 506
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 141/383 (36%), Gaps = 87/383 (22%)
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
+V + ++R + F YT L+ K GR EAL +E PD Y S+ L
Sbjct: 276 FVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVER-GFIPDAVTYTSIIDGL 334
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
++G ++E +R M + + EPD V Y A+++ + +
Sbjct: 335 CKLGRVEE-----------GCERFHEMRNRGY----EPDAVTYAALIDGFMKAKMIPKAH 379
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
V++Q+ +SG S TY + ++ + G++ EA A ME+RG V
Sbjct: 380 RVYRQMLQSGTVVSTVTYNIILD------------GLCKAGRVAEAYATFLAMEERGCVA 427
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
T +T++ L+ G++ + +
Sbjct: 428 TV------------------------------------VTYSALMDGFCSEGNVSAAVEL 451
Query: 455 FQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 513
F+ M D CEPN+ + N +++ R +KA FE+ + L PD
Sbjct: 452 FRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR-------------LCPD 498
Query: 514 EYTYSSMLEA-----SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
YT++S L E FE M G + ++ L+ RAG +
Sbjct: 499 VYTFNSFLHGLCQRLDTVGDGVELFE----SMVSQGTSPNLHSYSILMDGICRAGGLEVT 554
Query: 569 EHAFDSLLEAGEIPHPLFFTEML 591
F ++ G P + F ++
Sbjct: 555 LEIFHEMVSRGVAPDVVVFNTLI 577
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 110/276 (39%), Gaps = 38/276 (13%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D++ + +R V T LL L K G+ A+ L+L++ PD+ A+ V L + L
Sbjct: 3 DRKLVDTR-VCTALLNGLCKTGQLDRAM----LLLDEMPCSPDMVAFTVVINGLCREKRL 57
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E ++ER + EPD V YN ++ + + F + K++
Sbjct: 58 DEAFSVLERAVRAGC---------------EPDYVTYNVFIDGLCKAERVDDAFQLLKKM 102
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
+ P+ TY LV + G+++EA+A + M ++G T Y
Sbjct: 103 DEKKCLPTTVTY------------TALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYT 150
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 460
+ L GR ++A + + +P +T LI G +D+ + M +
Sbjct: 151 VVIDGLSKAGRVEEARRIFVDMLG-NGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVE 209
Query: 461 H-----CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+ EP++ N +++ + A F+E
Sbjct: 210 NGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE 245
Score = 46.6 bits (109), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 128/331 (38%), Gaps = 46/331 (13%)
Query: 111 ENLRELKEMFEKDL-------NWVLDDDVQLGSDYFAKNVEWHPEKRWRS-EAEAIR--V 160
E L +LKE E+ ++D +LG + E E R R E +A+
Sbjct: 307 EALLQLKEAVERGFIPDAVTYTSIIDGLCKLGR--VEEGCERFHEMRNRGYEPDAVTYAA 364
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D + +M K + R M QSG + + +L GL G +A + ++
Sbjct: 365 LIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATF---LAME 421
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
++ + + Y+ L+ G A+ +F ML D P++ +Y+ + L + G L
Sbjct: 422 ERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML-DRGCEPNLVSYNIIIRGLCRAGKL 480
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQ 339
+ E++ Q+ L PD+ +N+ L+ C +F+
Sbjct: 481 AKAYFYFEKLLQRR---------------LCPDVYTFNSFLHGLCQRLDTVGDGVELFES 525
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ G P+ +Y + M+ R G + + M RGV V+
Sbjct: 526 MVSQGTSPNLHSYSILMDGICR------------AGGLEVTLEIFHEMVSRGVAPDVVVF 573
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
L LC GR +A+ V +++ R S P
Sbjct: 574 NTLIRWLCIAGRVDEALEVFRELE--RRSAP 602
>gi|159465707|ref|XP_001691064.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
gi|158279750|gb|EDP05510.1| predicted mitochondrial protein [Chlamydomonas reinhardtii]
Length = 630
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/366 (19%), Positives = 148/366 (40%), Gaps = 81/366 (22%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL------------------------------ 225
LLK L G R+AM + DW+ ++ L
Sbjct: 33 LLKDLSRLGKDRRAMELFDWLRSANERSPLRQLCDVYSYTATISLCIYSQDVDRAMELMN 92
Query: 226 --------KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
++ +T L+ + K G+ AL I+N M N P++ Y+++ G++
Sbjct: 93 EMRQRNIERNVHTFTALMNVCIKCGKLPLALEIYNNM-RAANCMPNVVTYNTLVDVYGKL 151
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G + + +++ M+Q+ +EP L YN ++ AC +Q + V+
Sbjct: 152 GRWERAIHVLDLMKQEG---------------VEPVLRTYNTLIIACNMCNQPREALAVY 196
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
++L G P++ TY L+ A+ + ++ +A+ + M ++ + +
Sbjct: 197 QRLLSDGYTPNSTTY------------NALISAYGKTMQLGKALEVYQEMLRQNMERSVI 244
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y L G+W+ A+ + +++ + P +T+ L+ + GG + +F+
Sbjct: 245 TYSSLISACEKAGQWETALRIFNEMQQ-DNCVPNTVTYNSLVTACAQGGQWEKATEVFEQ 303
Query: 458 MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
M H C P++ T A++ Y R + KA + F G + G KPD
Sbjct: 304 MTAHGCTPDVVTYTALISAYERGGQWQKALQAF---------GKMCMQG----CKPDAIV 350
Query: 517 YSSMLE 522
Y+++++
Sbjct: 351 YNAIID 356
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 124/315 (39%), Gaps = 41/315 (13%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
D+ Y A ++ C+ S + ++R+ ++ + T+ M +C
Sbjct: 67 DVYSYTATISLCIYSQDVDRAMELMNEMRQRNIERNVHTFTALMNVCIKC---------- 116
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
GK+ A+ NM + Y L GRW+ A+ V++ +K +P+
Sbjct: 117 --GKLPLALEIYNNMRAANCMPNVVTYNTLVDVYGKLGRWERAIHVLDLMKQ-EGVEPVL 173
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
T+ LII+ + ++++Q + D PN T NA++ Y + KA E+++E
Sbjct: 174 RTYNTLIIACNMCNQPREALAVYQRLLSDGYTPNSTTYNALISAYGKTMQLGKALEVYQE 233
Query: 492 TTRAN--SSGYTFLSGDGAPLK--------------------PDEYTYSSMLEASATAHQ 529
R N S T+ S A K P+ TY+S++ A A Q
Sbjct: 234 MLRQNMERSVITYSSLISACEKAGQWETALRIFNEMQQDNCVPNTVTYNSLVTACAQGGQ 293
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
WE V++ M GC D + L+ R G+ AF + G P + +
Sbjct: 294 WEKATEVFEQMTAHGCTPDVVTYTALISAYERGGQWQKALQAFGKMCMQGCKPDAIVYN- 352
Query: 590 MLIQAIVQSNYEKAV 604
AI+ + +E +
Sbjct: 353 ----AIIDTLWETGI 363
>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
Length = 552
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 184/442 (41%), Gaps = 51/442 (11%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+F Y+ +++ L AGR +A+ + + M+ D + + A++ V + + G +K KL
Sbjct: 119 KFTYSTVVSALADAGRVDDAVALVHEMVADGVVAAE--AFNPVLRAMLRAGDVKGAAKLF 176
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E M+ K P YN +++ + + V +++ + G+ P
Sbjct: 177 EFMQLKGCV---------------PTAATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVP 221
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
TYG ++ RC G++ +A ME+ G+ VY + C
Sbjct: 222 GVMTYGAVVDGLVRC------------GRVKDAWKVAEEMERNGLARNEFVYSTVITGFC 269
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
+G A+ V E + + +P + ++ +I + G + + +F+ M D C PNI
Sbjct: 270 KSGEIDCALKVWEAMVA-SPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNI 328
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T +M++ Y + S+A ++EE GA P+ +YS ++
Sbjct: 329 ITYGSMIQGYFKIGDTSRALSVWEEMI-------------GAGCMPNAVSYSILINGLCN 375
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI-PHPL 585
+ + V+K M GC D + ++ +G F +L +G P +
Sbjct: 376 VGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVI 435
Query: 586 FFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRISRDKLEKLL 642
+ +L ++ + +A+ L+N M P +T + F + E R R+ LE L+
Sbjct: 436 SYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIFLREFGAGE-RKGREFLEGLV 494
Query: 643 NALCN--CNAASSEITVSNLSR 662
LC+ N A+ E+ + L++
Sbjct: 495 VRLCDRRRNMAAGEVLMVMLAK 516
>gi|212274769|ref|NP_001130292.1| uncharacterized protein LOC100191386 [Zea mays]
gi|194688764|gb|ACF78466.1| unknown [Zea mays]
Length = 510
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 152/354 (42%), Gaps = 45/354 (12%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ + + PD +Y ++ L + G L + + M D + PDL
Sbjct: 1 MRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPLME---------------DDAVAPDL 45
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-LLKVLVRAFWE 373
++++ +++ + +F +LR +G++P Y A+ +Y + LL+ R
Sbjct: 46 ILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLLRDAKRML-- 103
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
+ +M GV A Y + L GR A+ + ++++ KP +I
Sbjct: 104 ----------LHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKP-DI 152
Query: 434 TFTGLIISSMDGGHID---DCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+ +I+++ G +D + +F M+ P++ T N ML+VY +F +A LF
Sbjct: 153 SVFNIILNAY--GQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLF 210
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
+ R+ S G G G+ +KP+ TY++M+ + + E + + M G Q D
Sbjct: 211 D-LMRSTSDGN---GGAGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDA 266
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
++ +L +AGK F+ L EAG P+ + M++ YE+A
Sbjct: 267 ITYSTILSIWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVA------YERA 314
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 137/353 (38%), Gaps = 60/353 (16%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ +LA L + GR A+ +F+ M + PDI+ ++ + GQ+ L +E +L
Sbjct: 118 TYSPILAALARRGRHLAAVSLFSHMRAVARVKPDISVFNIILNAYGQLDLAREADRLFWS 177
Query: 290 MRQK---PSKRIKN-MHRKNWDPVL-------------------------EPDLVVYNAV 320
MR+ PS N M R D L +P++V YN +
Sbjct: 178 MRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSTSDGNGGAGSSVKPNVVTYNTM 237
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA 380
+ S + + + ++++ G++P A TY +L + V+A GK++ A
Sbjct: 238 ITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYS--------TILSIWVKA----GKLDRA 285
Query: 381 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 440
+ + G +Y + G A ++ +K P E I+
Sbjct: 286 ARLFEKLREAGTEIDPVLYQTMVVAYERAGLASQAKRLLRDLKD-PEGIPKETAIK--IL 342
Query: 441 SSMDGGHIDDCISIFQHMKDHCEPNIGTVN-AMLKVYSRNDMFSKAKELFEETTRANSSG 499
+S G +++ +F+ + E +V+ AM+ +Y++N E+F+E +
Sbjct: 343 AS--AGRLEEAAWLFRRAVNTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQ-- 398
Query: 500 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
PD ++ + A +++ +Y+ M +GC H
Sbjct: 399 -----------LPDSEIIATAMNAYGKLKEFDKAAALYQAMREAGCVFSDRVH 440
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 159/380 (41%), Gaps = 50/380 (13%)
Query: 216 VYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
++ L + L+ V YT LL G++G+P +A F M ++ + P+I +Y+++
Sbjct: 389 IFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKN-SCRPNIVSYNALIDAY 447
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
G G+ KE + L+ M + + PD+V + +L AC Q +
Sbjct: 448 GSAGMFKEAISLLHEMEKDG---------------IPPDVVSISTLLTACGRCRQITKID 492
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
+ + + G+K + Y + SY F + GK E A M V
Sbjct: 493 TILEAAKSRGIKLNIVCYNSGIGSYLN---------FGDYGKALELYAV---MMASNVNP 540
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
A Y L LC G++ +++ E + LR E+ ++ LI S + G + + S
Sbjct: 541 DAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEV-YSSLICSYVKQGKLTEAEST 599
Query: 455 FQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 513
F MK+ C P++ T AM++ Y+ + + A +LF+E +G ++PD
Sbjct: 600 FSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEM-------------EGNTVQPD 646
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR----AGKCHLLE 569
SS++EA Q E + + M L+Q + ++ S ++E
Sbjct: 647 AIICSSLMEALNRGSQHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIE 706
Query: 570 HAFDSL--LEAGEIPHPLFF 587
H SL + G + H L F
Sbjct: 707 HLDSSLSSISVGTLNHLLTF 726
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/404 (20%), Positives = 176/404 (43%), Gaps = 52/404 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLM 254
L++ + GS + A+ V W +K++ + +R +Y ++ + + + +A +F
Sbjct: 125 LIREITFAGSLQHAVHVFRW---MKNQENYCARNDIYGMMIRLHARHSQIDQARGLF-FE 180
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+++ PD Y+S+ + G + + +++ M + + P
Sbjct: 181 MQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLR---------------AAIPPSR 225
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
YN V+NAC + WK + K++ ++G+ P T+ +++ AF
Sbjct: 226 TTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTH------------NIVLSAFKNG 273
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE-I 433
+ ++A+A M+ + + CL +G++ +A+ ++ ++ R P + +
Sbjct: 274 SQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVV 333
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T+T ++ S G ++DC ++F M + +PNI + NA+L Y+ M + A +F+
Sbjct: 334 TYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFK-- 391
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
L +G L+PD +Y+++L A + Q E +K M + C+ + +
Sbjct: 392 ---------LLKQNG--LRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSY 440
Query: 553 AWLLVEASRAGKCHLLEHAFDSL--LEAGEIPHPLFFTEMLIQA 594
L+ AG + + A L +E IP + L+ A
Sbjct: 441 NALIDAYGSAG---MFKEAISLLHEMEKDGIPPDVVSISTLLTA 481
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 129/348 (37%), Gaps = 48/348 (13%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G WR A++++D + SR Y ++ G AG +AL + M + + PD
Sbjct: 204 GQWRWAINIMD---DMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRN-GVGPD 259
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ ++ V + + E M+ + PD N V++
Sbjct: 260 LVTHNIVLSAFKNGSQYSKAIAYFEMMKGAN---------------IAPDTFTLNIVIHC 304
Query: 324 CVPSHQWKGVFWVFKQLR--KSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
V Q+ + +R ++ P TY M SY C GK+ +
Sbjct: 305 LVKDGQYGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVC------------GKVEDCK 352
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
A M GV Y L + G DA+ + + +K +P +++T L+ +
Sbjct: 353 AVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQ-NGLRPDVVSYTTLLNA 411
Query: 442 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
G + F+ M K+ C PNI + NA++ Y MF +A L E +
Sbjct: 412 YGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEK------ 465
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
DG P PD + S++L A Q + + + G +L+
Sbjct: 466 -----DGIP--PDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLN 506
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/421 (19%), Positives = 171/421 (40%), Gaps = 57/421 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G+W++A+ + + DL + + +L+ + +A+ F +M
Sbjct: 231 VINACGAAGNWKKALELCKKMTRNGVGPDLVTHNI---VLSAFKNGSQYSKAIAYFEMM- 286
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N+ PD + V L + G E ++L+ MR+K ++ PD+V
Sbjct: 287 KGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQ-------------CPPDVV 333
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y +++++ + + VF + G+KP+ +Y L+ A+ G
Sbjct: 334 TYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSY------------NALLGAYASRG 381
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEI 433
+A+ + ++Q G+ Y L +G+ + A E K +R + +P +
Sbjct: 382 MHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAR---EAFKEMRKNSCRPNIV 438
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
++ LI + G + IS+ M KD P++ +++ +L R +K + E
Sbjct: 439 SYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAA 498
Query: 493 -TRA--------NSSGYTFLS-GD------------GAPLKPDEYTYSSMLEASATAHQW 530
+R NS ++L+ GD + + PD TY+ ++ ++
Sbjct: 499 KSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKY 558
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
++ M L + ++ L+ + GK E F S+ E+G +P L +T M
Sbjct: 559 AESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAM 618
Query: 591 L 591
+
Sbjct: 619 I 619
>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 168/399 (42%), Gaps = 56/399 (14%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDI 264
WR + V W K + +YT+L+ LG+ GR H A +F ++LE C D
Sbjct: 26 WRCTLEVFSW--SKKQSWYCPNSRLYTRLIGFLGREGRVHNATLLFQEMLLEKCQ--ADQ 81
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
Y ++ G+ + +E + + M++ +P +P+ V NA+++A
Sbjct: 82 YTYTALVNAYGKAKMFEEALAVFSHMKESN------------EPNCQPNTVTCNALIDAL 129
Query: 325 VPSHQWKGVFWVFKQLRKS------GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKIN 378
V + VF +R G +P+ TY VL+ A +EG ++
Sbjct: 130 VKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVITY------------NVLIDALCKEGLLD 177
Query: 379 EAVAAVRNME----QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEI 433
+ ++ M + V ++ Y L G ++ A +V+ + + H +P I
Sbjct: 178 IGMKVLQYMRDGNTDQSVQPNSATYNTLINACGKGGLYEKAEELVDLM--VEHGVQPDHI 235
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T+T LI + G ++ + F+ MK + ++ AM+ Y R ++ KA+E+F+
Sbjct: 236 TYTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMM 295
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
+ L+P++ TY S++EA A E V+ M SG + + +
Sbjct: 296 QHSG-------------LRPNQVTYLSLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIY 342
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ +AG D + AG P+ + ++ +L
Sbjct: 343 SSLIDAYGKAGNYLEAARMLDMMRRAGCQPNLITYSAIL 381
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 16/118 (13%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
++ Y L+ GKAG P E+ +FN+M E ++ Y S+ G+ G E ++
Sbjct: 303 NQVTYLSLMEAYGKAGLPEESRNVFNIMRES-GYEGNVLIYSSLIDAYGKAGNYLEAARM 361
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
++ MR+ +P+L+ Y+A+L++C S+ W + ++L+ G
Sbjct: 362 LDMMRRAGC---------------QPNLITYSAILSSCCKSNCWVEAQVLLRRLQVFG 404
>gi|414879860|tpg|DAA56991.1| TPA: hypothetical protein ZEAMMB73_837882 [Zea mays]
Length = 677
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 153/356 (42%), Gaps = 45/356 (12%)
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
L + + + PD +Y ++ L + G L + + M D + P
Sbjct: 166 LEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPLME---------------DDAVAP 210
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-LLKVLVRAF 371
DL++++ +++ + +F +LR +G++P Y A+ +Y + LL+ R
Sbjct: 211 DLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLLRDAKRML 270
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ +M GV A Y + L GR A+ + ++++ KP
Sbjct: 271 ------------LHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKP- 317
Query: 432 EITFTGLIISSMDGGHID---DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKE 487
+I+ +I+++ G +D + +F M+ P++ T N ML+VY +F +A
Sbjct: 318 DISVFNIILNAY--GQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVH 375
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
LF+ R+ S G G G+ +KP+ TY++M+ + + E + + M G Q
Sbjct: 376 LFD-LMRSTSDGN---GGAGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQP 431
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
D ++ +L +AGK F+ L EAG P+ + M++ YE+A
Sbjct: 432 DAITYSTILSIWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVA------YERA 481
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 138/354 (38%), Gaps = 62/354 (17%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ +LA L + GR A+ +F+ M + PDI+ ++ + GQ+ L +E +L
Sbjct: 285 TYSPILAALARRGRHLAAVSLFSHMRAVARVKPDISVFNIILNAYGQLDLAREADRLFWS 344
Query: 290 MRQ---KPSKRIKN-MHRKNWDPVL-------------------------EPDLVVYNAV 320
MR+ PS N M R D L +P++V YN +
Sbjct: 345 MRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSTSDGNGGAGSSVKPNVVTYNTM 404
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA 380
+ S + + + ++++ G++P A TY +L + V+A GK++ A
Sbjct: 405 ITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYS--------TILSIWVKA----GKLDRA 452
Query: 381 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK-PLEITFTGLI 439
+ + G +Y + ++ A LV + + LR K P I I
Sbjct: 453 ARLFEKLREAGTEIDPVLYQTMVVA------YERAGLVSQAKRLLRDLKDPEGIPKETAI 506
Query: 440 ISSMDGGHIDDCISIFQHMKDHCEPNIGTVN-AMLKVYSRNDMFSKAKELFEETTRANSS 498
G +++ +F+ + E +V+ AM+ +Y++N E+F+E +
Sbjct: 507 KILASAGRLEEAAWLFRRAVNTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQ- 565
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
PD ++ + A +++ +Y+ M +GC H
Sbjct: 566 ------------LPDSEIIATAMNAYGKLKEFDKAAALYQAMREAGCVFSDRVH 607
>gi|384249299|gb|EIE22781.1| hypothetical protein COCSUDRAFT_47692 [Coccomyxa subellipsoidea
C-169]
Length = 1226
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 160/369 (43%), Gaps = 57/369 (15%)
Query: 234 LLAILGKAGRPHEALRIFN--LMLED-------CNLYPDIAAYHSVAVTLGQVGLLKELV 284
LL L + G H A F+ L L D ++Y AA S+ V+ Q L+ +
Sbjct: 101 LLKELARTGLAHRAQEFFDHVLALGDSTEAARLADVYTYTAAI-SICVSAQQ---LERAL 156
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+L M+++ +R N+H ++A++N C+ Q K V++ +++ G
Sbjct: 157 ELSADMQRRGVQR--NVH-------------THSALMNVCIKCGQLKLALDVWEDMQRDG 201
Query: 345 LKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
+ P+ TY L+ + + G+ +A+ +R M+ +G+ Y L
Sbjct: 202 IVPNVVTY------------NTLIDVYGKLGQWEQALQVLRRMKFQGIEPVTRTYNTLMI 249
Query: 405 CLCNNGRWQDAMLVVEKIKSLRHSKPLEIT-FTGLIISSMDGGHIDDCISIFQHM-KDHC 462
+G+WQ A+ + E++++ H+ L T + LI + G + + ++ M + C
Sbjct: 250 ACNTSGQWQTALQLYEEMRAAGHA--LNTTSYNALISAHSKAGDLPQVLDTYRQMVQQGC 307
Query: 463 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
E ++ T ++++ ++ + A F+E + N +P+ T++S++
Sbjct: 308 ERSVITYSSLISACEKSGEWQLALRFFDECLKDN-------------CRPNVITFNSLIT 354
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
A A QWE +++ M GC D + L+ R GK L AF ++ G P
Sbjct: 355 ACAQGAQWEKARELFELMQQQGCTPDVVTYTALISAYERGGKWQLALQAFQAMQAKGCKP 414
Query: 583 HPLFFTEML 591
+ + ++
Sbjct: 415 DSIVYNAII 423
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
VLD + + +S Y+ L++ K+G ALR F+ L+D N P++ ++S+
Sbjct: 295 VLDTYRQMVQQGCERSVITYSSLISACEKSGEWQLALRFFDECLKD-NCRPNVITFNSLI 353
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
Q ++ +L E M+Q+ PD+V Y A+++A +W+
Sbjct: 354 TACAQGAQWEKARELFELMQQQGCT---------------PDVVTYTALISAYERGGKWQ 398
Query: 332 GVFWVFKQLRKSGLKPSAATY 352
F+ ++ G KP + Y
Sbjct: 399 LALQAFQAMQAKGCKPDSIVY 419
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/298 (18%), Positives = 111/298 (37%), Gaps = 60/298 (20%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
D+ Y A ++ CV + Q + + +++ G++ + T+ M +C L W
Sbjct: 135 DVYTYTAAISICVSAQQLERALELSADMQRRGVQRNVHTHSALMNVCIKCGQLKLALDVW 194
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
E+ M++ G+V Y L G+W+ A+ V+ ++K
Sbjct: 195 ED------------MQRDGIVPNVVTYNTLIDVYGKLGQWEQALQVLRRMK--------- 233
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
F G+ EP T N ++ + + + A +L+EE
Sbjct: 234 --FQGI------------------------EPVTRTYNTLMIACNTSGQWQTALQLYEEM 267
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
++G+ + +Y++++ A + A Y+ M GC+ +
Sbjct: 268 ---RAAGHAL----------NTTSYNALISAHSKAGDLPQVLDTYRQMVQQGCERSVITY 314
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ L+ ++G+ L FD L+ P+ + F ++ + +EKA L M
Sbjct: 315 SSLISACEKSGEWQLALRFFDECLKDNCRPNVITFNSLITACAQGAQWEKARELFELM 372
>gi|145524846|ref|XP_001448245.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415789|emb|CAK80848.1| unnamed protein product [Paramecium tetraurelia]
Length = 967
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 147/331 (44%), Gaps = 43/331 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+KG G K +A+S+ + + + K +R + LL K + + A R F M
Sbjct: 415 LIKGCGRKKRLNEAISLFEEMKQIGIK---PNRISFNSLLDSCVKCNKMNVAWRYFEEMR 471
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ ++PD Y +L +K R + + I + + +PD +
Sbjct: 472 KQYGIFPDNFTY----------SILVNGIKTNHSNRDELLRAITLLEQIQETGQFKPDEI 521
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+YN++++ACV ++ + +FK+++ ++PS+ TYG +L++A+ +
Sbjct: 522 LYNSLIDACVKFNEIQKGMQLFKEMKNKSIEPSSVTYG------------ILIKAYGKMN 569
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE-IT 434
+N A M+Q+ + Y L N R A+ +E++KS + P+ +
Sbjct: 570 DLNGAFRMFEEMKQKKIPINDVTYGCLVDACVRNDRLDQALQFIEQMKS--QNLPINTVL 627
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
+T +I ++ + F MK + PN+ T N++L +N + ++A +LF+E
Sbjct: 628 YTTIIKGFCKLNQTEEAMKYFSLMKQNQRTYPNLITYNSLLDGLVKNGLMNQADKLFQEL 687
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+ +KPD T+S++L+
Sbjct: 688 VE-------------STIKPDLITFSTLLKG 705
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 135/336 (40%), Gaps = 40/336 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY--PDIAAYHSVAVTLGQVGLLKELVKL 286
F YT L+ G + LR+ + E+ Y PD Y+ + G L +L
Sbjct: 338 FTYTTLIN--GLKNSDNMDLRLAFQLFEEYKQYNQPDQIIYNCLLDACINAGDLNRGFQL 395
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ M+Q S ++ D + YN ++ C + +F+++++ G+K
Sbjct: 396 LNEMKQSQS--------------IQLDEITYNTLIKGCGRKKRLNEAISLFEEMKQIGIK 441
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P+ ++ ++S +C + ++EE + +Q G+ Y L +
Sbjct: 442 PNRISFNSLLDSCVKCNKMNVAWRYFEEMR-----------KQYGIFPDNFTYSILVNGI 490
Query: 407 CNNGRWQDAML----VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH- 461
N +D +L ++E+I+ KP EI + LI + + I + +F+ MK+
Sbjct: 491 KTNHSNRDELLRAITLLEQIQETGQFKPDEILYNSLIDACVKFNEIQKGMQLFKEMKNKS 550
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR----ANSSGYTFLSGDGAPLKPDEYTY 517
EP+ T ++K Y + + + A +FEE + N Y L A ++ D
Sbjct: 551 IEPSSVTYGILIKAYGKMNDLNGAFRMFEEMKQKKIPINDVTYGCLV--DACVRNDRLDQ 608
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
+ + +Y + C+L+QT+ A
Sbjct: 609 ALQFIEQMKSQNLPINTVLYTTIIKGFCKLNQTEEA 644
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 101/268 (37%), Gaps = 58/268 (21%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-----GLA--------- 355
++P +V N +++ ++Q + F+ L+ + KP TY GL
Sbjct: 298 IQPTIVTINTMIDQYFKNNQKDKAWKTFENLKLTSTKPDNFTYTTLINGLKNSDNMDLRL 357
Query: 356 ----MESYRR----------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
E Y++ CLL + A G +N + M+Q + + Y
Sbjct: 358 AFQLFEEYKQYNQPDQIIYNCLLDACINA----GDLNRGFQLLNEMKQSQSIQLDEITYN 413
Query: 402 LACCLCN-NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 460
C R +A+ + E++K + KP I+F L+ S + ++ F+ M+
Sbjct: 414 TLIKGCGRKKRLNEAISLFEEMKQI-GIKPNRISFNSLLDSCVKCNKMNVAWRYFEEMRK 472
Query: 461 H--CEPNIGT----VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 514
P+ T VN + +S D +A L E+ + KPDE
Sbjct: 473 QYGIFPDNFTYSILVNGIKTNHSNRDELLRAITLLEQIQ------------ETGQFKPDE 520
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMAL 542
Y+S+++A F + KGM L
Sbjct: 521 ILYNSLIDACVK------FNEIQKGMQL 542
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 162/378 (42%), Gaps = 50/378 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAIL 238
M+Q G+ E L+ G W A +L + G+K S +V++++LA
Sbjct: 325 MSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK-----PSSYVFSRILAGF 379
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
G +A + M + + PD Y+ + T G+ L + +RMR++
Sbjct: 380 RDRGDWQKAFAVLREM-QASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEE---- 434
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
+EPD+V +N +++A + +F+++R+S P TY
Sbjct: 435 -----------IEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTY------ 477
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
+++ E+ + A + M+++G+V Y L +GR+++A+
Sbjct: 478 ------NIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDC 531
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYS 477
+E +K+ KP + L+ + G D +++ + MK D E +I +N+++ +
Sbjct: 532 IEAMKA-DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFG 590
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+ +A + + F+ +G L+PD TY+++++A Q++ +Y
Sbjct: 591 EDRRVVEAFSVLQ-----------FMKENG--LRPDVITYTTLMKALIRVEQFDKVPVIY 637
Query: 538 KGMALSGCQLDQTKHAWL 555
+ M SGC D+ A L
Sbjct: 638 EEMITSGCAPDRKARAML 655
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 140/330 (42%), Gaps = 47/330 (14%)
Query: 172 AKNWKFVRI----MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
A W+ RI M G+ + ++L G D+G W++A +VL + + D
Sbjct: 347 AGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPD--- 403
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y ++ GK A+ F+ M E+ + PD+ ++++ + G ++L
Sbjct: 404 RHFYNVMIDTFGKYNCLGHAMDAFDRMREE-EIEPDVVTWNTLIDAHCKGGRHDRAMELF 462
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E MR+ P YN ++N +W+GV + ++++ GL P
Sbjct: 463 EEMRESNCP---------------PGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVP 507
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ TY LV + G+ EA+ + M+ G+ + ++Y+ L
Sbjct: 508 NIITY------------TTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYA 555
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD-----CISIFQHMKDH- 461
G A+ VV+ +K + LE++ L+++S+ +D S+ Q MK++
Sbjct: 556 QRGLADHALNVVKAMK----ADGLEVSI--LVLNSLINAFGEDRRVVEAFSVLQFMKENG 609
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
P++ T ++K R + F K ++EE
Sbjct: 610 LRPDVITYTTLMKALIRVEQFDKVPVIYEE 639
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 125/307 (40%), Gaps = 37/307 (12%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++P YNA+L V K V ++ + G+ P ATY L +++Y R
Sbjct: 295 IKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRA------- 347
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
WE +I ++ ME GV ++ V+ + + G WQ A V+ ++++ +
Sbjct: 348 GRWESARI-----LLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQA-SGVR 401
Query: 430 PLEITFTGLIISSMDG----GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSK 484
P + F ++I + GH D F M+ + EP++ T N ++ + + +
Sbjct: 402 P-DRHFYNVMIDTFGKYNCLGHAMDA---FDRMREEEIEPDVVTWNTLIDAHCKGGRHDR 457
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A ELFEE +N P TY+ M+ +WE E + M G
Sbjct: 458 AMELFEEMRESNC-------------PPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQG 504
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKA 603
+ + L+ R+G+ +++ G P P + L+ A Q + A
Sbjct: 505 LVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMY-HALVNAYAQRGLADHA 563
Query: 604 VALINAM 610
+ ++ AM
Sbjct: 564 LNVVKAM 570
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 135/341 (39%), Gaps = 55/341 (16%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
T L++ LG AGR EA +F + P AY+++ ++G LK ++++ M
Sbjct: 267 TALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMS 326
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
Q + PD Y+ +++A + +W+ + K++ G+KPS+
Sbjct: 327 QCG---------------VAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYV 371
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
+ + +R + G +A A +R M+ GV Y +
Sbjct: 372 FSRILAGFR------------DRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNC 419
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 470
AM ++++ +P +T+ LI + GG D + +F+ M++ +C P T N
Sbjct: 420 LGHAMDAFDRMRE-EEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYN 478
Query: 471 AMLKVYSRND-------MFSKAKE------LFEETTRANSSGYT-----------FLSGD 506
M+ + + M S+ KE + TT + G + + D
Sbjct: 479 IMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD 538
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
G LKP Y +++ A A ++ V K M G ++
Sbjct: 539 G--LKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEV 577
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 179/417 (42%), Gaps = 48/417 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL +G +AM LD++ + + + +T ++ L K G+ A+ M+
Sbjct: 180 LINGLCIEGRIVEAMEQLDYIM---SRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMV 236
Query: 256 E-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E DC P++ +Y + +L + L+ E V L MR + P +
Sbjct: 237 ELDCE--PEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIG---------------ISPTV 279
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V YN+++ S QWK +FK++ + +KP T+ +LV A +E
Sbjct: 280 VTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTF------------SILVDALCKE 327
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
G + EA++ M Q + Y L +C + W+++ ++ ++ S R+ +P +T
Sbjct: 328 GVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLS-RNIRPDVVT 386
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
F+ + G + + SI M + PN+ T N+++ Y + +A+++F+
Sbjct: 387 FSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMV 446
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
+ PD +Y+ +++ + + + + ++ M+ G + H
Sbjct: 447 NKGCA-------------PDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHT 493
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L+ +AG+ + + F + G P + ++ +L + ++A+AL A+
Sbjct: 494 TLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEAL 550
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 145/359 (40%), Gaps = 42/359 (11%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
E + +++D L + + + M G+ T L+ G+ + G W+QA +
Sbjct: 243 EVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILF 302
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+ K D+ + ++ L+ L K G EAL +F M++ + PDI Y S+
Sbjct: 303 KEMLEWNMKPDVVT---FSILVDALCKEGVVLEALSVFGKMIQ-IAMEPDIVTYSSLIHG 358
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV---------------------LEP 312
+ + L KE L+ M + + R + W V L P
Sbjct: 359 VCKSSLWKESSTLLNEMLSR-NIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRP 417
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
++V YN++++ Q VF + G P +Y +L++ +
Sbjct: 418 NVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSY------------NILIKGYC 465
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
+ +I+EA M +G+ + + L LC GR A + +K+ S H P +
Sbjct: 466 KSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGS--HGCPPD 523
Query: 433 -ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
IT++ L+ GH+D+ +++F+ + K +PN +L + AKELF
Sbjct: 524 LITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELF 582
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 154/379 (40%), Gaps = 58/379 (15%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN------WDPVLEPDLV 315
PD+ Y ++ + G + + ++L+ M KP+ N K W+ V + +
Sbjct: 280 PDVVIYSTLVNGFSEQGRVDDAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQ---L 336
Query: 316 VYNAVLNACVPSHQWKGVFW--------------VFKQLRKSGLKPSAATYGLAMESYRR 361
+ V C+P+ + V +Q+ K G +P A Y
Sbjct: 337 IVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIY--------- 387
Query: 362 CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
L+ +F E+G++++A+ + +M V + + + LC RW DA ++
Sbjct: 388 ---NTLIYSFSEQGRVDDALKLLNSMPCSPDVISFNAALKG---LCRAERWDDAEELI-- 439
Query: 422 IKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 479
++ LR PL E+TF LI S G +++ I +F+ M + C P+I T ++++ S
Sbjct: 440 VQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQ 499
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
+ A ELF+ P KPD + Y+++L+ A +WE +
Sbjct: 500 GLVESAIELFQSM----------------PCKPDIFGYNAVLKGLCRAARWEDAGELISN 543
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
MA C ++ L+ + G F+ + + G P + ++ Q
Sbjct: 544 MARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGR 603
Query: 600 YEKAVALINAMAYAPFHIT 618
+ A L++ M+ P ++
Sbjct: 604 LDDARRLLSTMSCKPDAVS 622
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 148/367 (40%), Gaps = 57/367 (15%)
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALR 249
E L L G AM VL+ ++ + D +Y L+ + GR +AL+
Sbjct: 349 EATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPD---AVIYNTLIYSFSEQGRVDDALK 405
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
+ N M C+ PD+ ++++ L + + +LI +M ++ P+
Sbjct: 406 LLNSM--PCS--PDVISFNAALKGLCRAERWDDAEELIVQMLREDC------------PL 449
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+E + +N ++++ + + VF+Q+ K G P TY L+
Sbjct: 450 IE---MTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTY------------SSLIN 494
Query: 370 AFWEEGKINEAVAAVRNMEQR-GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
E+G + A+ ++M + + G +V L C RW+DA ++ + + +
Sbjct: 495 GLSEQGLVESAIELFQSMPCKPDIFGYNAVLKGL----CRAARWEDAGELISNM-ARKDC 549
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKE 487
P EITF LI S G +D I +F+ M + P+I T NA++ +S A+
Sbjct: 550 PPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARR 609
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
L + KPD +Y+S L+ A +W+ E V M C
Sbjct: 610 LLSTMS----------------CKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPP 653
Query: 548 DQTKHAW 554
++ +
Sbjct: 654 NEVTFKY 660
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 123/326 (37%), Gaps = 38/326 (11%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ PD YN VL + QW+ + ++ ++ P+ T+ +R
Sbjct: 208 VAPDTYTYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQ------------IR 255
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
AF + G ++ AV + M Q G +Y L GR DA+ ++ + ++
Sbjct: 256 AFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGMLCKPNTI 315
Query: 430 PLEITFTGLIISSM--DGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
GL I+ D G + I + ++ C PN T + + +N + A E
Sbjct: 316 CYNAALKGLCIAQRWEDVGQL-----IVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAME 370
Query: 488 LFEETTR---------ANSSGYTFLSG----------DGAPLKPDEYTYSSMLEASATAH 528
+ E+ + N+ Y+F + P PD ++++ L+ A
Sbjct: 371 VLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPCSPDVISFNAALKGLCRAE 430
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+W+ E + M C L + L+ + G+ + F+ + + G P + ++
Sbjct: 431 RWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYS 490
Query: 589 EMLIQAIVQSNYEKAVALINAMAYAP 614
++ Q E A+ L +M P
Sbjct: 491 SLINGLSEQGLVESAIELFQSMPCKP 516
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 78/213 (36%), Gaps = 18/213 (8%)
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPN 465
LC R DA V++ +K+ + P ++ L+ G + D + N
Sbjct: 122 LCAQRRLADAERVLDALKAAGAADP--VSHNTLVAGYCRDGRLADAERLLAAAGLSGAAN 179
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T ++ Y R+ + A L P+ PD YTY+++L
Sbjct: 180 VVTYTTLINGYCRSGRLADALALIASM----------------PVAPDTYTYNTVLMGLC 223
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
A QWE E + M + C ++ A + + G D + + G P +
Sbjct: 224 GARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVV 283
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 618
++ ++ Q + A+ L+N M P I
Sbjct: 284 IYSTLVNGFSEQGRVDDAIELLNGMLCKPNTIC 316
>gi|302782654|ref|XP_002973100.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
gi|300158853|gb|EFJ25474.1| hypothetical protein SELMODRAFT_442013 [Selaginella moellendorffii]
Length = 674
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 130/318 (40%), Gaps = 43/318 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ ++ L+ + +P EAL+ F M + + PD Y+SV G+VG + E V+L E
Sbjct: 179 YTFSTLINCAKRCRQPEEALKWFERMKSE-GIVPDEVTYNSVIDMYGRVGRVNEAVELYE 237
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+++ NW + D V Y A+ N + ++ + + +++R SG P+
Sbjct: 238 KLKSV-----------NW----KLDTVTYGAIANVYARAGDYQSIIQLVQEMRDSGSSPN 282
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
A ++ L+ + GK+N+A M GV T L
Sbjct: 283 AV------------IMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTR 330
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIG 467
G + A V E +K+ + + + L+ + ++GG ++ I + MK C P+
Sbjct: 331 VGAYDQAFEVYETLKTEGWKCDVAV-YNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHL 389
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T + Y+ M A+ +F++ N KPD ++ M+ A A
Sbjct: 390 TYRTAMNTYATKGMVDPARRMFDKVVALNG-------------KPDTPLFTVMIRACKLA 436
Query: 528 HQWEYFEYVYKGMALSGC 545
+ E ++ M SGC
Sbjct: 437 GEIEQASKIFDEMMESGC 454
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 120/302 (39%), Gaps = 27/302 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++PD ++ ++N Q + F++++ G+ P TY ++ Y R
Sbjct: 174 IQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRV------- 226
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
G++NEAV ++ Y +A G +Q + +V++++ S
Sbjct: 227 -----GRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIIQLVQEMRD-SGSS 280
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P + L+ + G ++ +F M+ P T++ ++++Y+R + +A E+
Sbjct: 281 PNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEV 340
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+E L +G K D Y+S+++A + E E + K M +GC D
Sbjct: 341 YET-----------LKTEG--WKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPD 387
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+ + + G FD ++ P FT M+ + E+A + +
Sbjct: 388 HLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFD 447
Query: 609 AM 610
M
Sbjct: 448 EM 449
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
S++ V ++D + + L+ L KAG+ ++A ++FN M + P +
Sbjct: 266 SIIQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEM-RTSGVSPTPVTLSIL 324
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
+VG + ++ E ++ + W + D+ VYN+++ ACV +
Sbjct: 325 VEMYTRVGAYDQAFEVYETLKTE-----------GW----KCDVAVYNSLMKACVEGGRV 369
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+ + K+++++G P TY AM +Y
Sbjct: 370 EQAEDILKEMKRAGCNPDHLTYRTAMNTY 398
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 157/375 (41%), Gaps = 47/375 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
+L+D + + K K M G +FT M+ GLG G +A + +
Sbjct: 164 ILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMID---GLGKSGHVDKAFFLFEE- 219
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
+ + + +R VY L+ LG++GR A ++F ML L PD + S+ LG
Sbjct: 220 --MTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSK-GLQPDHVTFTSLVYGLGV 276
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G R ++RI R D D+ +YN +++ S + + +
Sbjct: 277 AG------------RASEARRIFQEAR---DVGCALDVNLYNVLIDTLCKSKRLDEAWEI 321
Query: 337 FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
F +L + GL P T+ M+ + G+I++A + +M++ G
Sbjct: 322 FGELEEDGLVPDVYTFNALMD------------GLCKSGRIHDAFILLGDMKRAGCTPDV 369
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
+VY L L +GR ++A ++ +++SL + +P +T+ LI S GG I+D + +F+
Sbjct: 370 TVYNTLIDGLRKSGRVEEAGQLLLEMQSLGY-EPDVVTYNTLIDESCKGGRIEDALRLFE 428
Query: 457 HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
+ N T N +L +A +LF + G + PD T
Sbjct: 429 EISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGV---------IDPDFVT 479
Query: 517 YSSMLEASATAHQWE 531
Y+++L + A E
Sbjct: 480 YTTLLNGARQAGLSE 494
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 142/345 (41%), Gaps = 44/345 (12%)
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
++R L PD +N ++NA + + V+ +F++++ P+ TY + +++
Sbjct: 111 VYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVC 170
Query: 361 RC-----LLKV------------------LVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
+C LKV ++ + G +++A M G+V T
Sbjct: 171 KCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRV 230
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
VY L L +GR A + ++ S + +P +TFT L+ G + IFQ
Sbjct: 231 VYNSLIHGLGRSGRADAAAKLFREMLS-KGLQPDHVTFTSLVYGLGVAGRASEARRIFQE 289
Query: 458 MKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
+D C ++ N ++ ++ +A E+F E L DG L PD YT
Sbjct: 290 ARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGE-----------LEEDG--LVPDVYT 336
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
++++++ + + + M +GC D T + L+ ++G+ +E A LL
Sbjct: 337 FNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGR---VEEAGQLLL 393
Query: 577 EA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 618
E G P + + ++ ++ E A+ L ++ F T
Sbjct: 394 EMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANT 438
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 110/276 (39%), Gaps = 27/276 (9%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGK 376
YN++++A V + + V++ + +SGL+P T+ VL+ AF + +
Sbjct: 92 YNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTF------------NVLMNAFKKAKR 139
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
++ M+ + Y L +C G + A+ V +KS R +P T+T
Sbjct: 140 VDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKS-RGCRPNIFTYT 198
Query: 437 GLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV-NAMLKVYSRNDMFSKAKELFEETTRA 495
+I GH+D +F+ M V N+++ R+ A +LF E
Sbjct: 199 SMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREML-- 256
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
S G L+PD T++S++ A + +++ GC LD + L
Sbjct: 257 -SKG----------LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVL 305
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ ++ + F L E G +P F ++
Sbjct: 306 IDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALM 341
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 175/425 (41%), Gaps = 63/425 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
L+ GL G QA++VL+ + G D+ + Y L+ L KAG EA R+ M
Sbjct: 713 LVDGLWKSGQTEQAITVLEEMVGKGHHPDVVT---YNTLIDSLCKAGDLEEARRLHGDMS 769
Query: 255 --LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
+ C + P++ Y + L +VG + E +LI+ M RK+ D + P
Sbjct: 770 SRVSRCCV-PNVVTYSVLINGLCKVGRIDEARELIQEMM-----------RKSCDVL--P 815
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK--PSAATYGLAMESYRRCLLKVLVRA 370
+++ YN+ L+ + + LR L+ P T+ ++ +C
Sbjct: 816 NIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKC-------- 867
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
G+ +EA +M G V Y L LC + + A ++E + + P
Sbjct: 868 ----GQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVD-KGVTP 922
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
IT++ L+ + H+D+ + + M C PN+ T N+++ ++D +A ++F
Sbjct: 923 DVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMF 982
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA--LSGCQL 547
++ T + L PD+ TY ++++ F + G A L
Sbjct: 983 DDMTLKHG------------LAPDKITYCTLIDG--------LFRTGWAGQAEVLLDAMP 1022
Query: 548 DQTKHAW--LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
D +A+ + S+ G + A +LE +P + F ++ A N+E+A A
Sbjct: 1023 DPDTYAFNCCINGLSKLGD---VSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASA 1079
Query: 606 LINAM 610
L M
Sbjct: 1080 LFEEM 1084
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 172/421 (40%), Gaps = 47/421 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G++ QA ++ + + + D+ + + L+ L KAG+ A I +LM
Sbjct: 573 LIAGACKAGNFEQASALFEEMVAKNLQPDVMT---FGALIDGLCKAGQVEAARDILDLM- 628
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + P++ Y+++ L + G ++E + +E M PD +
Sbjct: 629 GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCV---------------PDSI 673
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y +++ A + + + +L+ G P TY +LV W+ G
Sbjct: 674 TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTY------------NILVDGLWKSG 721
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL--RHSKPLEI 433
+ +A+ + M +G Y L LC G ++A + + S R P +
Sbjct: 722 QTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVV 781
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCE--PNIGTVNAMLKVYSRNDMFSKAKELFE 490
T++ LI G ID+ + Q M + C+ PNI T N+ L + M ++A EL
Sbjct: 782 TYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELM- 840
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
R+ G +S PD T+S++++ Q + V+ M G +
Sbjct: 841 ---RSLRDGSLRVS-------PDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVV 890
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ L+ + K +S+++ G P + ++ ++ S+ ++A+ L++ M
Sbjct: 891 TYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGM 950
Query: 611 A 611
A
Sbjct: 951 A 951
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 109/560 (19%), Positives = 214/560 (38%), Gaps = 104/560 (18%)
Query: 161 LVDRLSEREMTAKNWKFVRIMN-QSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
++D L + + + + ++ M + GL+ + L+ GL G QA ++LD +
Sbjct: 471 IIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLD---AM 527
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
D + + + L K G AL+++N MLE L PD ++ + + G
Sbjct: 528 PDP----DTYAFNCCINGLSKLGDVSRALQVYNRMLE-LELVPDKVTFNILIAGACKAGN 582
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
++ L E M K L+PD++ + A+++ + Q + +
Sbjct: 583 FEQASALFEEMVAKN---------------LQPDVMTFGALIDGLCKAGQVEAARDILDL 627
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ G+ P+ TY LV + G+I EA + M G V + Y
Sbjct: 628 MGNLGVPPNVVTY------------NALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITY 675
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 458
L LC R DA+ +V ++KS P +T+ L+ G + I++ + M
Sbjct: 676 GSLVYALCRASRTDDALQLVSELKSFGW-DPDTVTYNILVDGLWKSGQTEQAITVLEEMV 734
Query: 459 -KDH-------------------------------------CEPNIGTVNAMLKVYSRND 480
K H C PN+ T + ++ +
Sbjct: 735 GKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVG 794
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA----SATAHQWEYFEYV 536
+A+EL +E R + + P+ TY+S L+ S A E +
Sbjct: 795 RIDEARELIQEMMRKSCD-----------VLPNIITYNSFLDGLCKQSMMAEACELMRSL 843
Query: 537 YKG-MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
G + +S D + L+ + G+ + FD ++ G +P+ + + ++
Sbjct: 844 RDGSLRVSP---DTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLC 900
Query: 596 VQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAAS 652
E+A A+I +M P IT ++ L ++ D+ +LL+ + +
Sbjct: 901 KTDKMERAHAMIESMVDKGVTPDVIT---YSVLVDAFCKASHVDEALELLHGMASRGCTP 957
Query: 653 SEITVSNLSRALHALCRSEK 672
+ +T +++ + LC+S++
Sbjct: 958 NVVTFNSI---IDGLCKSDQ 974
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 162/416 (38%), Gaps = 69/416 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y+ LL KAG E R + +A Y+ V +L + G E + +E
Sbjct: 147 FTYSTLLRATYKAGGDVE--RTLGFFRRIRSSSRSVADYNIVLQSLCRAG---ETARALE 201
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
R + M R + P +V YN ++N S++ +F++L + G P
Sbjct: 202 IFRGE-------MARDG----VAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPD 250
Query: 349 AATYGLAMESY------------------RRCL-----LKVLVRAFWEEGKINEAVAAVR 385
TY ++S R C+ VL+ + G+I+EA ++
Sbjct: 251 VVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQ 310
Query: 386 NMEQRG--VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS----KPLEITFTGLI 439
M ++ V+ Y LC +A E ++SLR P +TF+ LI
Sbjct: 311 EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEA---CELMRSLRDGSLRVSPDTVTFSTLI 367
Query: 440 ISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
G ID+ S+F M PN+ T NA++ + D +A + E
Sbjct: 368 DGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV---DK 424
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL--- 555
G T PD TYS +++A A + + + GMA GC + +
Sbjct: 425 GVT----------PDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDG 474
Query: 556 LVEASRAGKCHLLEHAFDSL-LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L ++ R+G+ FD + L+ G +P + + ++ +A AL++AM
Sbjct: 475 LCKSDRSGEAF---QMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM 527
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 91/453 (20%), Positives = 173/453 (38%), Gaps = 96/453 (21%)
Query: 224 DLKSR------FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQ 276
D+ SR Y+ L+ L K GR EA + M + C++ P+I Y+S L +
Sbjct: 276 DMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCK 335
Query: 277 VGLLKELVKLIERMRQKP----------SKRIKNMHRKN--------WDPVLE----PDL 314
+ E +L+ +R S I + + +D ++ P++
Sbjct: 336 QSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNV 395
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+ YNA++N + + + + + + G+ P TY VLV AF +
Sbjct: 396 ITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY------------SVLVDAFCKA 443
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEI 433
+++EA+ + M RG + + LC + R +A + + + +L+H P +I
Sbjct: 444 SRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDM-ALKHGLVPDKI 502
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKD------HCEPN----IGTVNAMLKVYSR----- 478
T+ LI G ++ M D +C N +G V+ L+VY+R
Sbjct: 503 TYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELE 562
Query: 479 -----------------NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
F +A LFEE N L+PD T+ +++
Sbjct: 563 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN-------------LQPDVMTFGALI 609
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK----CHLLEHAFDSLLE 577
+ A Q E + M G + + L+ ++G+ C LE ++
Sbjct: 610 DGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE----MVS 665
Query: 578 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+G +P + + ++ S + A+ L++ +
Sbjct: 666 SGCVPDSITYGSLVYALCRASRTDDALQLVSEL 698
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 121/299 (40%), Gaps = 28/299 (9%)
Query: 317 YNAVLNACVPSHQWKGVFWVFK-QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN VL + + + +F+ ++ + G+ P+ TY ++ +
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTY------------NTIINGLCKSN 230
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
++ + + +RG Y L LC G ++A + + S R P +T+
Sbjct: 231 ELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSS-RSCVPNVVTY 289
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCE--PNIGTVNAMLKVYSRNDMFSKAKELFEET 492
+ LI G ID+ + Q M + C+ PNI T N+ L + M ++A EL
Sbjct: 290 SVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM--- 346
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
R+ G +S PD T+S++++ Q + V+ M G + +
Sbjct: 347 -RSLRDGSLRVS-------PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITY 398
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
L+ +A K +S+++ G P + ++ ++ S ++A+ L++ MA
Sbjct: 399 NALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 457
>gi|302789998|ref|XP_002976767.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
gi|300155805|gb|EFJ22436.1| hypothetical protein SELMODRAFT_105248 [Selaginella moellendorffii]
Length = 669
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 130/318 (40%), Gaps = 43/318 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ ++ L+ + +P EAL+ F M + + PD Y+SV G+VG + E V+L E
Sbjct: 179 YTFSTLINCAKRCRQPEEALKWFERMKSE-GIVPDEVTYNSVIDMYGRVGRVNEAVELYE 237
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+++ NW + D V Y A+ N + ++ + + +++R SG P+
Sbjct: 238 KLKSV-----------NW----KLDTVTYGAIANVYARAGDYQSIMQLVQEMRDSGSSPN 282
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
A ++ L+ + GK+N+A M GV T L
Sbjct: 283 AV------------IMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTR 330
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIG 467
G + A V E +K+ + + + L+ + ++GG ++ I + MK C P+
Sbjct: 331 VGAYDQAFEVYETLKTEGWKCDVAV-YNSLMKACVEGGRVEQAEDILKEMKRAGCNPDHL 389
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T + Y+ M A+ +F++ N KPD ++ M+ A A
Sbjct: 390 TYRTAMNTYATKGMVDPARRMFDKVVALNG-------------KPDTPLFTVMIRACKLA 436
Query: 528 HQWEYFEYVYKGMALSGC 545
+ E ++ M SGC
Sbjct: 437 GEIEQASKIFDEMMESGC 454
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 120/302 (39%), Gaps = 27/302 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++PD ++ ++N Q + F++++ G+ P TY ++ Y R
Sbjct: 174 IQPDNYTFSTLINCAKRCRQPEEALKWFERMKSEGIVPDEVTYNSVIDMYGRV------- 226
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
G++NEAV ++ Y +A G +Q M +V++++ S
Sbjct: 227 -----GRVNEAVELYEKLKSVNWKLDTVTYGAIANVYARAGDYQSIMQLVQEMRD-SGSS 280
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P + L+ + G ++ +F M+ P T++ ++++Y+R + +A E+
Sbjct: 281 PNAVIMNTLMGTLSKAGKVNQAKKVFNEMRTSGVSPTPVTLSILVEMYTRVGAYDQAFEV 340
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+E L +G K D Y+S+++A + E E + K M +GC D
Sbjct: 341 YET-----------LKTEG--WKCDVAVYNSLMKACVEGGRVEQAEDILKEMKRAGCNPD 387
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+ + + G FD ++ P FT M+ + E+A + +
Sbjct: 388 HLTYRTAMNTYATKGMVDPARRMFDKVVALNGKPDTPLFTVMIRACKLAGEIEQASKIFD 447
Query: 609 AM 610
M
Sbjct: 448 EM 449
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
S++ V ++D + + L+ L KAG+ ++A ++FN M + P +
Sbjct: 266 SIMQLVQEMRDSGSSPNAVIMNTLMGTLSKAGKVNQAKKVFNEM-RTSGVSPTPVTLSIL 324
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
+VG + ++ E ++ + W + D+ VYN+++ ACV +
Sbjct: 325 VEMYTRVGAYDQAFEVYETLKTE-----------GW----KCDVAVYNSLMKACVEGGRV 369
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+ + K+++++G P TY AM +Y
Sbjct: 370 EQAEDILKEMKRAGCNPDHLTYRTAMNTY 398
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 125/307 (40%), Gaps = 29/307 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+V YN +L A ++ + +R G P+ TY VL+
Sbjct: 40 PDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTY------------NVLMDGM 87
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKP 430
EG +++A+ +RN+ G + Y + LC+ RW DA LV E ++ + P
Sbjct: 88 CGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLR--ENCPP 145
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
E TF +I S G + I + + M H C NI T NA++ A L
Sbjct: 146 NEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLL 205
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
++ S G KPD TY+++L+ +A +W E + M +GC D
Sbjct: 206 ---SKMKSYG----------CKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDN 252
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
L+ + G F + + G P+ + ++ ++ + ++A+ L N
Sbjct: 253 VTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNE 312
Query: 610 MAYAPFH 616
M + F+
Sbjct: 313 MGHKGFN 319
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 126/321 (39%), Gaps = 46/321 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
L+ L ++G R A+SVLD + D+ Y LL K +A+ + +LM
Sbjct: 13 LIHTLCERGQVRDALSVLDDMLCRGCAPDV---VTYNILLEATCKGRGYRQAMELIDLMR 69
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E C P+ Y+ + + G ++ +E +R PS K P
Sbjct: 70 AEGCT--PNNVTYNVLMDGMCGEG---DVDDALELLRNLPSHGCK------------PST 112
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY-RRCLLK-------- 365
V YN VL + +W + ++ + P+ AT+ + + S R+ LL+
Sbjct: 113 VNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEK 172
Query: 366 --------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
++ E+ ++ A+ + M+ G Y L LC+ R
Sbjct: 173 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAR 232
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
W DA +++ + P +TF LI G + D I +F+ M D C PN T +
Sbjct: 233 WVDAEELMDNMTQ-NGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYS 291
Query: 471 AMLKVYSRNDMFSKAKELFEE 491
++ ++ +A ELF E
Sbjct: 292 TIISGLAKATKLDQALELFNE 312
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 153/400 (38%), Gaps = 107/400 (26%)
Query: 122 KDLNWVLDDDVQLGS--DYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVR 179
+D VLDD + G D N+ + R +A+ L+D + T N +
Sbjct: 24 RDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME-LIDLMRAEGCTPNNVTYNV 82
Query: 180 IMNQSGLMFTEGQM---LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
+M+ M EG + L+LL+ L G ++ Y +L
Sbjct: 83 LMDG---MCGEGDVDDALELLRNLPSHGCKPSTVN-------------------YNTVLK 120
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS- 295
L A R +A + ML + N P+ A ++ V +L + GLL++ ++L+E+M +
Sbjct: 121 GLCSAERWGDADELVTEMLRE-NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCT 179
Query: 296 ------KRIKN--MHRKNWDPVL-----------EPDLVVYNAVL--------------- 321
I N ++N D + +PD+V YN +L
Sbjct: 180 ANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEEL 239
Query: 322 ------NACVPSHQW----------KGVFW----VFKQLRKSGLKPSAATY-----GLA- 355
N C+P + KG+ VFKQ+ G P++ TY GLA
Sbjct: 240 MDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAK 299
Query: 356 -------MESYRRC---------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+E + + ++L ++ I EA+ VR ++ G+ +Y
Sbjct: 300 ATKLDQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLY 359
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
+ LC NG+ + A+ ++ + S P ++T+ LI
Sbjct: 360 NAILLGLCRNGKTEFAIDIMAYMVS-SGCMPDDLTYVILI 398
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/503 (20%), Positives = 190/503 (37%), Gaps = 70/503 (13%)
Query: 173 KNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYT 232
++ ++++N+S + L L+ + KG + + G + R+LK
Sbjct: 61 RDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLK------ 114
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
KA R E L + PD+ +Y+++ + + ++ +RMR
Sbjct: 115 -------KAMRVMEILETYG--------DPDVYSYNAMISGFSKANQIDSANQVFDRMRS 159
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+ PD+V YN ++ + + + F V +L K G KPS TY
Sbjct: 160 RG---------------FSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITY 204
Query: 353 GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
+L+ A EG+INEA+ + RG+ Y + +C G
Sbjct: 205 ------------TILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGME 252
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 471
A+ V + S R P +++ L+ S ++ +D + + M CEPN+ T +
Sbjct: 253 DRALDFVRHL-SARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSI 311
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
++ + R +A + E L PD Y+Y ++ A + +
Sbjct: 312 LISSFCREGRVREAVNVLEVMKEKG-------------LTPDSYSYDPLISAFCKEGRLD 358
Query: 532 Y-FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
EY+ K M GC D + +L + G L F+ L E G P + M
Sbjct: 359 LAIEYLEK-MVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTM 417
Query: 591 LIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKL-EKLLNALCNCN 649
N KA+ +I+ M E + L + RD L ++ + L +
Sbjct: 418 FSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISC----LCRDGLVDEAIGLLVDME 473
Query: 650 AASSEITVSNLSRALHALCRSEK 672
A + TV + + L +C++ +
Sbjct: 474 ATRFQPTVISFNIVLLGMCKAHR 496
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 96/236 (40%), Gaps = 30/236 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
++ L++ + GR EA+ + +M E L PD +Y + + G L ++ +E+M
Sbjct: 309 HSILISSFCREGRVREAVNVLEVMKEK-GLTPDSYSYDPLISAFCKEGRLDLAIEYLEKM 367
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
D L PD+V YN +L VF++L + G P+
Sbjct: 368 VS--------------DGCL-PDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVR 412
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
Y + A W G +A+ + M ++G+ Y L CLC +G
Sbjct: 413 AY------------NTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDG 460
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 465
+A+ ++ +++ R +P I+F +++ + + I + M + C PN
Sbjct: 461 LVDEAIGLLVDMEATRF-QPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPN 515
>gi|302833221|ref|XP_002948174.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
gi|300266394|gb|EFJ50581.1| hypothetical protein VOLCADRAFT_116752 [Volvox carteri f.
nagariensis]
Length = 1001
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 146/337 (43%), Gaps = 53/337 (15%)
Query: 197 LKGLGDKGSWRQAMSVL----DWVYGLKDKRDLKSRFV------YTKLLAILGKAGRPHE 246
L+ L D S+ +S+ D L+ ++++SR + YT L+ + K G+
Sbjct: 138 LRALCDVYSYTATISLCIHGQDVDRALELMQEMRSRNIERNVHTYTALMNVCIKCGKLPL 197
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
AL I+N M N P++ Y+++ G++G + + +++ M+ +
Sbjct: 198 ALDIYNSM-RAVNCMPNVVTYNTLVDVYGKLGQWERAIHVLDVMKHEG------------ 244
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
+EP L YN ++ AC +Q + V+++L G P++ TY
Sbjct: 245 ---VEPVLRTYNTLIIACNMCNQPREALAVYQRLLSDGFTPNSTTY------------NA 289
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L+ A+ + ++ +A+ + M ++ + + Y L G+W+ A+ + +++ +
Sbjct: 290 LISAYGKTTQLGKALEVYQEMLRQNMDRSVITYSSLISACEKAGQWETALRIFNEMQQDK 349
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 485
P +T+ L+ + GG + +F+ M H C P++ T A++ Y R + KA
Sbjct: 350 -CVPNTVTYNSLVTACAQGGQWEKAAEVFEQMNAHGCTPDVVTYTALISAYERGGQWQKA 408
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
+ F + KPD Y+++++
Sbjct: 409 LQAFHKMCVQGC-------------KPDAIVYNAIID 432
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 118/302 (39%), Gaps = 36/302 (11%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
D+ Y A ++ C+ + +++R ++ + TY M +C
Sbjct: 143 DVYSYTATISLCIHGQDVDRALELMQEMRSRNIERNVHTYTALMNVCIKC---------- 192
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
GK+ A+ +M + Y L G+W+ A+ V++ +K +P+
Sbjct: 193 --GKLPLALDIYNSMRAVNCMPNVVTYNTLVDVYGKLGQWERAIHVLDVMKH-EGVEPVL 249
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
T+ LII+ + ++++Q + D PN T NA++ Y + KA E+++E
Sbjct: 250 RTYNTLIIACNMCNQPREALAVYQRLLSDGFTPNSTTYNALISAYGKTTQLGKALEVYQE 309
Query: 492 TTRAN--SSGYTFLSGDGAPLK--------------------PDEYTYSSMLEASATAHQ 529
R N S T+ S A K P+ TY+S++ A A Q
Sbjct: 310 MLRQNMDRSVITYSSLISACEKAGQWETALRIFNEMQQDKCVPNTVTYNSLVTACAQGGQ 369
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
WE V++ M GC D + L+ R G+ AF + G P + +
Sbjct: 370 WEKAAEVFEQMNAHGCTPDVVTYTALISAYERGGQWQKALQAFHKMCVQGCKPDAIVYNA 429
Query: 590 ML 591
++
Sbjct: 430 II 431
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G W +A+ VLD + + L++ Y L+ +P EAL ++ +L
Sbjct: 220 LVDVYGKLGQWERAIHVLDVMKHEGVEPVLRT---YNTLIIACNMCNQPREALAVYQRLL 276
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM-RQKPSKRIKNMHR--------KNW 306
D P+ Y+++ G+ L + +++ + M RQ + + W
Sbjct: 277 SD-GFTPNSTTYNALISAYGKTTQLGKALEVYQEMLRQNMDRSVITYSSLISACEKAGQW 335
Query: 307 DPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ L P+ V YN+++ AC QW+ VF+Q+ G P TY
Sbjct: 336 ETALRIFNEMQQDKCVPNTVTYNSLVTACAQGGQWEKAAEVFEQMNAHGCTPDVVTYTAL 395
Query: 356 MESYRR 361
+ +Y R
Sbjct: 396 ISAYER 401
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 140/340 (41%), Gaps = 45/340 (13%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S F Y ++ L K G + R+F + + + L PD+ Y+S+ G+VG L+E+ L
Sbjct: 229 SVFTYNVMIDYLCKEGDLENSRRLF-VQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASL 287
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
M+ D PD++ YN ++N + F F +++ +GLK
Sbjct: 288 FNEMK---------------DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLK 332
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P+ TY L+ AF +EG + A+ + +M + G++ Y L
Sbjct: 333 PNVVTY------------STLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDAN 380
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 464
C G +A ++ + L+ L I T+T L+ G + + +F+ M KD P
Sbjct: 381 CKAGNLTEAWKLLNDM--LQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISP 438
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
N A++ Y + + A ++ ++ T N +KPD Y S++
Sbjct: 439 NQQVYTALVHGYIKAERMEDAMKILKQMTECN-------------IKPDLILYGSIIWGH 485
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+ + E + + + M G + ++ +AGK
Sbjct: 486 CSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGK 525
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 123/298 (41%), Gaps = 36/298 (12%)
Query: 337 FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
F ++R P A + + + LVR F+ N+ + A G+ +
Sbjct: 183 FSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFF-----NDMIGA-------GIAPSV 230
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
Y + LC G +++ + +++ + S P +T+ LI G +++ S+F
Sbjct: 231 FTYNVMIDYLCKEGDLENSRRLFVQMREMGLS-PDVVTYNSLIDGYGKVGSLEEVASLFN 289
Query: 457 HMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFLSG------ 505
MKD C P+I T N ++ Y + + +A E F E + N Y+ L
Sbjct: 290 EMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEG 349
Query: 506 --DGA----------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
GA L P+E+TY+S+++A+ A + M +G +L+ +
Sbjct: 350 MMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYT 409
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
LL +AG+ E F S+L+ G P+ +T ++ I E A+ ++ M
Sbjct: 410 ALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 467
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/387 (18%), Positives = 153/387 (39%), Gaps = 43/387 (11%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
L + F YT L+ KAG EA ++ N ML+ + +I Y ++ L + G + E
Sbjct: 367 LPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQ-AGVKLNIVTYTALLDGLCKAGRMIEAE 425
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
++ M + + P+ VY A+++ + + + + + KQ+ +
Sbjct: 426 EVFRSMLKDG---------------ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 470
Query: 345 LKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
+KP YG ++ + K+ E + M+ RG+ + +
Sbjct: 471 IKPDLILYG------------SIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIID 518
Query: 405 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCE 463
G+ DA+ ++++ + + +T+ LI + G ++ + F M +
Sbjct: 519 AYFKAGKSSDALNFFQEMQDVGVEATI-VTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQ 577
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
PN+ +++ N+ AK+LF+E G T PD ++++++
Sbjct: 578 PNVAVYTSLIDGLCXNNCIESAKKLFDEM---QCRGMT----------PDITAFTALIDG 624
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
+ + + M + D + L+ S+ G+ H F+ ++E G +P
Sbjct: 625 NLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPE 684
Query: 584 PLFFTEMLIQAIVQSNYEKAVALINAM 610
+ +L + + ++A+ L N M
Sbjct: 685 EVLCICLLREYYKRGQLDEAIELKNEM 711
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 132/318 (41%), Gaps = 33/318 (10%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
WK + M Q+G+ LL GL G +A V + LKD + VYT L
Sbjct: 390 WKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM--LKDGISPNQQ-VYTAL 446
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ KA R +A++I M E CN+ PD+ Y S+ L+E ++E M+ +
Sbjct: 447 VHGYIKAERMEDAMKILKQMTE-CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 505
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ + V+ +++A + + F++++ G++ + TY
Sbjct: 506 ---------------ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTY-- 548
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
C VL+ E G + AV M G+ +VY L LC N +
Sbjct: 549 -------C---VLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIES 598
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAML 473
A + ++++ R P FT LI ++ G++ + + + M + E ++ +++
Sbjct: 599 AKKLFDEMQC-RGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLV 657
Query: 474 KVYSRNDMFSKAKELFEE 491
+S+ +A++ F E
Sbjct: 658 SGFSQCGELHQARKFFNE 675
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/459 (20%), Positives = 173/459 (37%), Gaps = 58/459 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G G ++A +++ L++ + Y L+ K+G +AL + L
Sbjct: 147 LIRGFCRSGKTKKATRIMEI---LENSGAVPDVITYNVLIGGYCKSGEIDKALEV----L 199
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E ++ PD+ Y+++ +L G LKE +++++R Q+ PD++
Sbjct: 200 ERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECY---------------PDVI 244
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y ++ A + ++RK G KP TY VL+ +EG
Sbjct: 245 TYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY------------NVLINGICKEG 292
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+++EA+ + NM G + + +C+ GRW DA ++ + + P +TF
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLR-KGCSPSVVTF 351
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
LI + I + + M H C PN + N +L + + +A E E
Sbjct: 352 NILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS 411
Query: 495 AN--------SSGYTFLSGDG--------------APLKPDEYTYSSMLEASATAHQWEY 532
++ T L DG P TY+++++ + EY
Sbjct: 412 RGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEY 471
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 592
+ + M G + D ++ LL R GK F + P + + +++
Sbjct: 472 AVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIML 531
Query: 593 QAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNED 631
+A+ + M TE +T L E D
Sbjct: 532 GLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIAD 570
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 123/304 (40%), Gaps = 36/304 (11%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD++ +++ S + K + + L SG P TY VL+ +
Sbjct: 139 PDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITY------------NVLIGGY 186
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ G+I++A+ +E+ V Y + LC++G+ ++AM V+++ + R P
Sbjct: 187 CKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDR-QLQRECYPD 242
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
IT+T LI ++ + + + + M K C+P++ T N ++ + +A +
Sbjct: 243 VITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLN 302
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
N Y KP+ T++ +L + + +W E + M GC
Sbjct: 303 -----NMPSYG--------CKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVV 349
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALI 607
L+ R LL A D L + G +P+ L + +L + ++A+ +
Sbjct: 350 TFNILINFLCRK---RLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYL 406
Query: 608 NAMA 611
M
Sbjct: 407 EIMV 410
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 87/221 (39%), Gaps = 28/221 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L++ L + + + + M + G + LL G + +A+ L+ +
Sbjct: 353 ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 412
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVG 278
D+ Y LL L K G+ A+ I N L + C+ P + Y++V L +VG
Sbjct: 413 GCYPDI---VTYNTLLTALCKDGKVDAAVEILNQLSSKGCS--PVLITYNTVIDGLTKVG 467
Query: 279 LLKELVKLIERMRQKPSK---------------------RIKNMHRKNWDPVLEPDLVVY 317
+ V+L+E MR+K K IK H + +P V Y
Sbjct: 468 KTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSI-KPSAVTY 526
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
NA++ + Q + + G KP+ ATY + +E
Sbjct: 527 NAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/434 (20%), Positives = 173/434 (39%), Gaps = 61/434 (14%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVY-TKLLAILGKAGRPHE 246
FT G + L LG G L + G+ + +Y T + A++ + G
Sbjct: 178 FTFGVAARALCRLGRAGD------ALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEA 231
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSK-----RI 298
A+ + ++L C D+ ++ + + L +G ++E +L++RM + PS +
Sbjct: 232 AMLLDEMLLMGC--AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLL 289
Query: 299 KNMHRKN--------WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + R + E ++V+ N V+ C+ + +++ + G P
Sbjct: 290 QGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVH 349
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY +L+ + G+ AV + ME++G Y L C NG
Sbjct: 350 TY------------SILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNG 397
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
W DA +++++ + S + + G+I + G +D + Q MK C+P+I T
Sbjct: 398 MWDDARAMLDQMLAKGFSMNSQ-GYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTY 456
Query: 470 NAMLKVYSRNDMFSKAKELF----EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
N M+ ND+ +A+ +F EE AN TY++++ A
Sbjct: 457 NTMIYHLCNNDLMEEAEHIFRNLIEEGVVANG-----------------ITYNTLIHALL 499
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+W+ + M L GCQLD + L+ + G + ++ G P+
Sbjct: 500 RNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNN- 558
Query: 586 FFTEMLIQAIVQSN 599
F MLI + ++
Sbjct: 559 FSYNMLINELCKAG 572
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/318 (16%), Positives = 120/318 (37%), Gaps = 31/318 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ P YN VL+ + +++++ + + P+ T+G+A R
Sbjct: 138 VSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA------------AR 185
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
A G+ +A+A +R M + G V A +Y + L G +A ++++++ + +
Sbjct: 186 ALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAA 245
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
+ TF L++ G + + + M C P++ T +L+ R +A +
Sbjct: 246 DVN-TFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
N ++++ T + +Y+ M GC D
Sbjct: 305 LGRLPEVNV-----------------VMLNTVIRGCLTEGKLARATELYEMMGSKGCPPD 347
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
++ L+ + G+ D + E G P+ + ++ +L ++ A A+++
Sbjct: 348 VHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLD 407
Query: 609 AMAYAPFHITERQWTELF 626
M F + + + +
Sbjct: 408 QMLAKGFSMNSQGYNGII 425
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 23/168 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+K L +G+ ++M++L+ + G+K + F Y L+ L KAG+ +AL +
Sbjct: 529 LIKALCKEGNVDRSMALLEEMVTKGIK-----PNNFSYNMLINELCKAGKVRDALELSKE 583
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
ML L PDI Y+++ L +VG + L+E++ +N+H PD
Sbjct: 584 MLNQ-GLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPN------ENVH---------PD 627
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
+V YN +++ + + G+ P+ T+G+ ++++ R
Sbjct: 628 IVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVR 675
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 166/400 (41%), Gaps = 61/400 (15%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
TKL+ IL + G+P EA IFN ++E + P Y ++ L R
Sbjct: 61 TKLMNILVERGKPQEAQFIFNSLVEQGH-RPTTVTYTALVAAL---------------TR 104
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
QK K I + + + ++PD ++ NA++NA S K +F+++ +SG KP+ +T
Sbjct: 105 QKRFKAISGLLSEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTST 164
Query: 352 YGLAMESY-----------------RRCLLK-------VLVRAFWEEGKINEAVAAVRNM 387
+ ++ Y R LK +LV A ++ I EA V M
Sbjct: 165 FNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQM 224
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
GV Y LA +G A ++ + + + P E T ++ + G+
Sbjct: 225 LASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLN-KKVNPNERTCGIIVGGYCEQGN 283
Query: 448 IDDCISIFQHMKD-HCEPNIGTVNAMLKVY---SRNDMFSKAKELFEETTRANSSGYTFL 503
+ + + + M+D PN+ N+++K + +D KA + EE+
Sbjct: 284 LAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESG---------- 333
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
+KPD T+S+++ ++A + + + ++ M SG + D + L RAG
Sbjct: 334 ------VKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAG 387
Query: 564 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
+ E + + + G P+ + FT ++ EKA
Sbjct: 388 EPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKA 427
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 139/348 (39%), Gaps = 53/348 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ + G+ ++AM + +++ + + L+ G +P E++++ LM
Sbjct: 133 IINAFSESGNVKEAMEIFQ---KMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMT 189
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
NL P+ Y+ + L + +KE ++ +M ++PD+V
Sbjct: 190 RTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASG---------------VQPDVV 234
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN + A + + + + P+ T G ++V + E+G
Sbjct: 235 TYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTCG------------IIVGGYCEQG 282
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEI 433
+ EA+ V M G+ ++ L + G D+ V + + + S KP I
Sbjct: 283 NLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIG---DSDGVDKALTMMEESGVKPDVI 339
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
TF+ ++ G +D C IF M K EP+I + + K + R KA+ L
Sbjct: 340 TFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLL--- 396
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ----WEYFEYV 536
F+S G ++P+ +++++ TA + W+ FE++
Sbjct: 397 --------NFMSKYG--VRPNVVIFTTIISGWCTAGKMEKAWKVFEHM 434
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 137/355 (38%), Gaps = 39/355 (10%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
+ +++ SE + + + M +SG T L+KG G ++M +L+
Sbjct: 130 LNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLEL-- 187
Query: 218 GLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
+ +LK + Y L+ L K EA + + ML + PD+ Y+++A Q
Sbjct: 188 -MTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLAS-GVQPDVVTYNTLARAYAQ 245
Query: 277 VGLLKELVKLIERMRQK---PSKRIKNMHRKNW-----------------DPVLEPDLVV 316
G + +I M K P++R + + D + P+LV+
Sbjct: 246 DGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVI 305
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGK 376
+N+++ + GV + +SG+KP T+ M + G+
Sbjct: 306 FNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSA------------GR 353
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
+++ +M + G+ V+ LA G A ++ S +P + FT
Sbjct: 354 MDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLL-NFMSKYGVRPNVVIFT 412
Query: 437 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+I G ++ +F+HM D PN+ T ++ Y +A+E+ +
Sbjct: 413 TIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEAKQPWRAEEILQ 467
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 158/406 (38%), Gaps = 54/406 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y LL G EA +F M E + PDI Y + T G++ L+++ +L+
Sbjct: 241 ITYNTLLGACAHRGLGDEAEMVFRTMNES-GIVPDINTYSYLVQTFGKLNRLEKVSELLR 299
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M + PD+ YN +L A K VF+Q++ +G +
Sbjct: 300 EMECGGNL---------------PDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVAN 344
Query: 349 AATYGLAMESY---------RRCLLK--------------VLVRAFWEEGKINEAVAAVR 385
AATY + + Y R L+ +L++ F E G E V
Sbjct: 345 AATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFH 404
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
+M + V Y L G ++DA ++ + + P +TG+I +
Sbjct: 405 DMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNE-KGVVPSSKAYTGVIEAFGQA 463
Query: 446 GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
++ + +F M + P + T N+++ ++R ++ +A+ + +R N SG
Sbjct: 464 ALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAIL---SRMNESG----- 515
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
LK D ++++ ++EA Q+E Y M + C+ ++ +L AG
Sbjct: 516 -----LKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGL 570
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
E F + +G +P + + ML A LI+AM
Sbjct: 571 VDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDRLNDAYNLIDAM 616
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/424 (19%), Positives = 180/424 (42%), Gaps = 60/424 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL---KSRFVYTKLLAILGKAGRPHEALRIFN 252
+ K +G W++++ + ++ +R + + ++T ++ +LG+ G + +F+
Sbjct: 104 VFKEFAQRGDWQRSLRLFKYM-----QRQIWCKPNEHIHTIMITLLGREGLLDKCREVFD 158
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
M + + + +Y ++ G+ G ++L+ M+Q+ + P
Sbjct: 159 EMPSN-GVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQER---------------VSP 202
Query: 313 DLVVYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
++ YN V+NAC W+G+ +F ++R G++P TY L+ A
Sbjct: 203 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITY------------NTLLGAC 250
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
G +EA R M + G+V + Y L R + ++ +++ + P
Sbjct: 251 AHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMEC-GGNLPD 309
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
++ L+ + + G I + + +F+ M+ C N T + +L +Y ++ + ++LF
Sbjct: 310 ITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFL 369
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E +N+ PD TY+ +++ ++ ++ MA + +
Sbjct: 370 EMKVSNTD-------------PDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQ 416
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLL---EAGEIPHPLFFTEMLIQAIVQSN-YEKAVAL 606
+ L+ + G L E A LL E G +P +T +I+A Q+ YE+A+ +
Sbjct: 417 TYEGLIFACGKGG---LYEDAKKILLHMNEKGVVPSSKAYTG-VIEAFGQAALYEEALVM 472
Query: 607 INAM 610
N M
Sbjct: 473 FNTM 476
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 151/398 (37%), Gaps = 82/398 (20%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ + GS ++AM V ++ + + Y+ LL + GK GR ++ +R L +
Sbjct: 316 LLEAYAELGSIKEAMGVFRQ---MQAAGCVANAATYSVLLNLYGKHGR-YDDVRDLFLEM 371
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N PD Y+ + G+ G KE+V L M ++ +EP++
Sbjct: 372 KVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEEN---------------VEPNMQ 416
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y ++ AC ++ + + + G+ PS+ Y +E AF +
Sbjct: 417 TYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIE------------AFGQAA 464
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
EA+ M + G T Y L G +++A ++ ++ + + +F
Sbjct: 465 LYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVH-SF 523
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
G+I + GG ++ + + M K +CEPN T+ A+L +Y + + +E F+E
Sbjct: 524 NGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEI-- 581
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT---------------------AHQ---- 529
+SG + P Y ML A HQ
Sbjct: 582 -KASG----------ILPSVMCYCMMLALYAKNDRLNDAYNLIDAMITMRVSDIHQVIGQ 630
Query: 530 -----------WEYFEYVYKGMALSGCQLDQTKHAWLL 556
W+ EYV+ + GC L + LL
Sbjct: 631 MIKGDFDDESNWQIVEYVFDKLNSEGCGLGMRFYNALL 668
>gi|297797974|ref|XP_002866871.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
gi|297312707|gb|EFH43130.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
Length = 561
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 194/474 (40%), Gaps = 106/474 (22%)
Query: 158 IRVLVDRLSEREMTAKNW-KFVRIM--NQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
+R L+ R+S++E K K+V+++ + L+F E LG W Q + V
Sbjct: 71 VRSLMSRISDKEPLVKTLDKYVKVVRCDHCFLLFEE---------LGKSDKWLQCLEVFR 121
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
W+ K + + VY+KL++++GK G+ A+ +F+ M ++ PD + Y+++
Sbjct: 122 WMQ--KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEM-KNSGCRPDASVYNALITAH 178
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
++ K +E++R K +K M R +P++V YN +L A S + V
Sbjct: 179 LHT---RDKAKALEKVRGYFDK-MKGMER------CQPNVVTYNILLRAFAQSGKVDQVN 228
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM---EQRG 391
+FK L S + P T+ M++Y + G I E A + M E +
Sbjct: 229 ALFKDLDMSPVSPDVYTFNGVMDAYGK------------NGMIKEMEAVLTRMRSNECKP 276
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEITFTGLIISSMDGGHID 449
+ T +V + + G+ Q+ + + KSL SK P TF +II+ ID
Sbjct: 277 DIITFNVLID------SYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMID 330
Query: 450 DCISIFQHMKD------------------HCEP------------------NIGTVNAML 473
+F+ M D +C T+NAML
Sbjct: 331 KAEWVFKKMNDMNYMPSFITYECMIMMYGYCGSVSRAREIFEEVVDSERVLKASTLNAML 390
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
+VY RN ++ +A +LF N+S + + PD TY + +A A E+
Sbjct: 391 EVYCRNGLYMEADKLFH-----NASAFR--------VHPDASTYKFLYKAYTKADMKEHV 437
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEAS---RAG------KCHLLEHAFDSLLEA 578
+ + K M G Q +L + RAG C L H DS + A
Sbjct: 438 QILMKKMEKDGIFSGQDYLVRILKTGNNLVRAGHETVLRTCPFLSHDDDSTVIA 491
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 35/246 (14%)
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM---- 443
+QR + VY +L + G+ + AM + ++K+ +P + LI + +
Sbjct: 125 KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN-SGCRPDASVYNALITAHLHTRD 183
Query: 444 DGGHIDDCISIFQHMK--DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
++ F MK + C+PN+ T N +L+ ++++ + LF++
Sbjct: 184 KAKALEKVRGYFDKMKGMERCQPNVVTYNILLRAFAQSGKVDQVNALFKDL--------- 234
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
D +P+ PD YT++ +++A + E V M + C+ D L+ +
Sbjct: 235 ----DMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGK 290
Query: 562 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL---------INAMAY 612
+ +E F SL+ + E P F M+I NY KA + +N M Y
Sbjct: 291 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMII------NYGKARMIDKAEWVFKKMNDMNY 344
Query: 613 APFHIT 618
P IT
Sbjct: 345 MPSFIT 350
>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 104/481 (21%), Positives = 185/481 (38%), Gaps = 61/481 (12%)
Query: 153 SEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSV 212
++A A+RV ++L+ E ++I+N++GL M ++ LG +W A V
Sbjct: 151 AKAVAVRVASEKLNSDE------DVMKIVNETGLRVDVRSMNVVVWQLGQMQNWYAATKV 204
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
+ + +V T L+A LG R +AL++F M E + I ++++ V
Sbjct: 205 FR---AFRSAGVEPNAYVCTTLIAALGCGRRLSQALKLFRWM-EKAGIERPIFTFNALMV 260
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
G+ V+L E M + + PD + + +++A + W
Sbjct: 261 ACGRCASGDTAVELFEEMEKLG---------------IVPDRITFTGLVSATTAAGLWDR 305
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
++ G Y +E C RA K EA + M ++G
Sbjct: 306 AQSFIDMMQARGFSIGLHEY---IEMQWAC-----ARA----RKPREAYGLFQVMLEQGY 353
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 452
Y L C +W+DAM I+ + P ++++ LI + + G + +
Sbjct: 354 ELKLESYNALLCAYERTAQWEDAMRTFIWIQD-KGLTPDVMSWSSLISACANAGQAERAL 412
Query: 453 SIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELF---------------------- 489
+ + MK C+PN+ + +LK Y + + KA+E+F
Sbjct: 413 EVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAY 472
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
E+ + YT + +K D +S+ + A A A QWE E +K M SGC +
Sbjct: 473 EKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNI 532
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
++ L+ G E F +L G P+P +L EK + +
Sbjct: 533 VTYSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFES 592
Query: 610 M 610
M
Sbjct: 593 M 593
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 131/330 (39%), Gaps = 48/330 (14%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y LL + + +A+R F + ++D L PD+ ++ S+ G + ++++ERM
Sbjct: 360 YNALLCAYERTAQWEDAMRTF-IWIQDKGLTPDVMSWSSLISACANAGQAERALEVLERM 418
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ +P++V + +L A + W+ +F + SG P+
Sbjct: 419 KTSDC---------------QPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEV 463
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGK-INEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+ + +Y E+G+ + + + +E+ G+ + L
Sbjct: 464 AWCSLLSAY-------------EKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKA 510
Query: 410 GRWQDAMLVVEKIKSLRHSK--PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
G+W+ L EK K + S P +T++ LI + D G + S+F+ M + PN
Sbjct: 511 GQWE---LAEEKFKQMTKSGCLPNIVTYSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNP 567
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
A+L+ Y + K FE ++PD+Y Y+++ A T
Sbjct: 568 QACCALLRAYGKGKELEKVIIFFESMEPQYG------------VEPDKYAYAAIFWACWT 615
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+W+ M ++GC D + L+
Sbjct: 616 CGEWQRAVKYIDRMEMAGCTPDSVIYTTLI 645
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 153/400 (38%), Gaps = 79/400 (19%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L D+ N V+ W VF+ R +G++P+A + L+
Sbjct: 178 LRVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAY------------VCTTLIA 225
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACCLCNNGRWQDAMLVVEKIKSLRH 427
A ++++A+ R ME+ G+ + L AC C +G A+ + E+++ L
Sbjct: 226 ALGCGRRLSQALKLFRWMEKAGIERPIFTFNALMVACGRCASG--DTAVELFEEMEKL-G 282
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHMK---------DHCEPNIGTVNAM------ 472
P ITFTGL+ ++ G D S M+ ++ E A
Sbjct: 283 IVPDRITFTGLVSATTAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPREAY 342
Query: 473 ------------LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 520
LK+ S N + +E T + + TF+ L PD ++SS+
Sbjct: 343 GLFQVMLEQGYELKLESYNALLCA----YERTAQWEDAMRTFIWIQDKGLTPDVMSWSSL 398
Query: 521 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 580
+ A A A Q E V + M S CQ + LL + G E F ++L++G
Sbjct: 399 ISACANAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGC 458
Query: 581 IPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEK 640
P+ + + +L S YEK RQW ++ + E KLE+
Sbjct: 459 PPNEVAWCSLL------SAYEKG----------------RQWKKVLYTIE------KLEE 490
Query: 641 LLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSA 680
L L + + T+S L++A EK + ++ S
Sbjct: 491 LGMKL---DVVAWSTTISALAKAGQWELAEEKFKQMTKSG 527
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/424 (19%), Positives = 179/424 (42%), Gaps = 60/424 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL---KSRFVYTKLLAILGKAGRPHEALRIFN 252
+ K +G W++++ + ++ +R + + +YT ++ +LG+ G + +F+
Sbjct: 106 VFKEFAQRGDWQRSLRLFKYM-----QRQIWCKPNEHIYTIMITLLGREGLLDKCREVFD 160
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
M + + + Y +V G+ G ++L+ M+Q+ + P
Sbjct: 161 EMPSN-GVARTVYVYTAVINAYGRNGQFHASLELLNGMKQER---------------VSP 204
Query: 313 DLVVYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
++ YN V+NAC W+G+ +F ++R G++P TY L+ A
Sbjct: 205 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITY------------NTLLGAC 252
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
G +EA R M + G+V + Y L R + ++ +++S + P
Sbjct: 253 AHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMES-GGNLPD 311
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
++ L+ + + G I + + +F+ M+ C N T + +L +Y ++ + +++F
Sbjct: 312 ITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFL 371
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E +N+ PD TY+ +++ ++ ++ M + +
Sbjct: 372 EMKVSNTD-------------PDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNME 418
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLL---EAGEIPHPLFFTEMLIQAIVQSN-YEKAVAL 606
+ L+ + G L E A LL E G +P +T +I+A Q+ YE+A+ +
Sbjct: 419 TYEGLIFACGKGG---LYEDAKKILLHMNEKGIVPSSKAYTG-VIEAFGQAALYEEALVV 474
Query: 607 INAM 610
N M
Sbjct: 475 FNTM 478
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 156/406 (38%), Gaps = 54/406 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y LL G EA +F M E + PDI Y + T G++ L+++ +L+
Sbjct: 243 ITYNTLLGACAHRGLGDEAEMVFRTMNES-GIVPDINTYSYLVQTFGKLNRLEKVSELLR 301
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M + PD+ YN +L A K VF+Q++ +G +
Sbjct: 302 EMESGGNL---------------PDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVAN 346
Query: 349 AATYGLAMESY---------RRCLLK--------------VLVRAFWEEGKINEAVAAVR 385
AATY + + Y R L+ +L++ F E G E V
Sbjct: 347 AATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFH 406
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
+M + V Y L G ++DA ++ + + P +TG+I +
Sbjct: 407 DMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNE-KGIVPSSKAYTGVIEAFGQA 465
Query: 446 GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
++ + +F M + P + T N+ + ++R ++ +A+ + +R N SG
Sbjct: 466 ALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAIL---SRMNESG----- 517
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
LK D ++++ +++A Q+E Y M + C+ ++ +L AG
Sbjct: 518 -----LKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGL 572
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
E F + +G +P + + ML A LI+ M
Sbjct: 573 VDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDEM 618
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 149/398 (37%), Gaps = 82/398 (20%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ + GS ++AM V ++ + + Y+ LL + GK GR + IF L +
Sbjct: 318 LLEAYAELGSIKEAMDVFRQ---MQAAGCVANAATYSVLLNLYGKHGRYDDVRDIF-LEM 373
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N PD Y+ + G+ G KE+V L M ++ +EP++
Sbjct: 374 KVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEEN---------------VEPNME 418
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y ++ AC ++ + + + G+ PS+ Y +E AF +
Sbjct: 419 TYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIE------------AFGQAA 466
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
EA+ M + G T Y G +++A ++ ++ + + +F
Sbjct: 467 LYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVH-SF 525
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
G+I + GG ++ + + M K +CEPN T+ +L VY + +++E F+E
Sbjct: 526 NGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEI-- 583
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT---------------------AHQ---- 529
+SG + P Y ML A HQ
Sbjct: 584 -KASG----------ILPSVMCYCLMLALYAKNDRLNDAYNLIDEMITMRVSDIHQGIGQ 632
Query: 530 -----------WEYFEYVYKGMALSGCQLDQTKHAWLL 556
W+ EYV+ + GC L + LL
Sbjct: 633 MIKGDFDDESNWQIVEYVFDKLNSEGCGLGMRFYNALL 670
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 157/369 (42%), Gaps = 55/369 (14%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
L V +KDK + F YT+L+ LGK+GR +A +F ML+D PD+ +++
Sbjct: 256 LGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKD-GCKPDVVLINNLIN 314
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH--QW 330
G+ G L++ +KL ++MR P++V YN V+ A S
Sbjct: 315 IFGKAGRLEDALKLFDQMRSLKCA---------------PNVVTYNTVIKALFESKAPAS 359
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
+ W F++++ +G+ PS+ TY +L+ F + ++ +A+ + M+++
Sbjct: 360 EAASW-FEKMKANGVTPSSFTYS------------ILIDGFCKTNRVEKALLLLEEMDEK 406
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
G + Y L L R++ A + ++K I + +I + G +
Sbjct: 407 GFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARI-YAVMIKNLGKCGRPSE 465
Query: 451 CISIFQHMKD-HCEPNIGTVNAMLKVYSRNDM----FSKAKELFEE-------------- 491
+ +F MK C P++ NA++ R M FS + + E
Sbjct: 466 AVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILN 525
Query: 492 ----TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
T R + F+ + +KPD +Y+++L + + + +E + + M G +
Sbjct: 526 GLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEY 585
Query: 548 DQTKHAWLL 556
D ++ +L
Sbjct: 586 DHITYSSIL 594
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 158/401 (39%), Gaps = 45/401 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT LLAI K+G +AL + M +D P + Y + LG+ G +++ +
Sbjct: 239 IYTTLLAIYFKSGD-EKALGLVQEM-KDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLN 296
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + K PD+V+ N ++N + + + +F Q+R P+
Sbjct: 297 MLKDGCK---------------PDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNV 341
Query: 350 ATYGLAMESYRRCLLKVLVRAFWE-EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY +++A +E + +EA + M+ GV ++ Y L C
Sbjct: 342 VTYN------------TVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCK 389
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 468
R + A+L++E++ + P + LI + + +F +K++C +
Sbjct: 390 TNRVEKALLLLEEMDE-KGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSAR 448
Query: 469 VNA-MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
+ A M+K + S+A +LF E + + PD Y Y++++ A
Sbjct: 449 IYAVMIKNLGKCGRPSEAVDLFNEMKKIGCN-------------PDVYAYNALMSGLVRA 495
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
E + M +GC D H +L +R G+ F + ++ P + +
Sbjct: 496 GMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSY 555
Query: 588 TEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
+L +E+A L+ M F ++ + E+
Sbjct: 556 NTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEA 596
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 129/302 (42%), Gaps = 44/302 (14%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
++++ ILGKA ++AL +F ++ P + Y+S+ + L Q G +++ +L M
Sbjct: 135 SEVVKILGKAKMVNKALSVF-YQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMC 193
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ PD + Y+ +++A V + +F +++ +GL P+A
Sbjct: 194 NEGD--------------CFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKI 239
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y L+ +++ G +A+ V+ M+ +G T Y EL L +GR
Sbjct: 240 Y------------TTLLAIYFKSGD-EKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGR 286
Query: 412 WQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTV 469
+DA V + L+ KP + LI G ++D + +F M+ C PN+ T
Sbjct: 287 VEDAYSVF--LNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTY 344
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
N ++K LFE A+ + F + P +TYS +++ ++
Sbjct: 345 NTVIKA------------LFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNR 392
Query: 530 WE 531
E
Sbjct: 393 VE 394
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 149/380 (39%), Gaps = 66/380 (17%)
Query: 173 KNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKD--KRDLKSRFV 230
K V+ M G T +L+KGLG G A SV ++ LKD K D+ +
Sbjct: 254 KALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSV--FLNMLKDGCKPDV---VL 308
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
L+ I GKAGR +AL++F+ M P++ Y++V L +
Sbjct: 309 INNLINIFGKAGRLEDALKLFDQM-RSLKCAPNVVTYNTVIKALFE-------------- 353
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ P+ + K + P Y+ +++ +++ + + +++ + G P A
Sbjct: 354 SKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPA 413
Query: 351 TYG-----------------LAMESYRRC------LLKVLVRAFWEEGKINEAVAAVRNM 387
Y L +E C + V+++ + G+ +EAV M
Sbjct: 414 AYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEM 473
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL---EITFTGLIISSMD 444
++ G Y L L G ++A + ++ + L I GL +
Sbjct: 474 KKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLART--- 530
Query: 445 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
G + +F MKD +P+ + N +L SR+ MF +A +L E S G+ +
Sbjct: 531 -GRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREM---GSRGFEY- 585
Query: 504 SGDGAPLKPDEYTYSSMLEA 523
D TYSS+LEA
Sbjct: 586 ---------DHITYSSILEA 596
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 164/404 (40%), Gaps = 47/404 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L +G ++A+S+L + G ++ Y L+A +AG A R+ +M
Sbjct: 196 LVRALCGRGHRKEALSILRDMRGAGCGPNV---VTYNTLVAAFFRAGEVDGAERLVGMMR 252
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E L P++ ++S+ + + G +++ K+ + M ++ L PD V
Sbjct: 253 EG-GLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREG---------------LAPDGV 296
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN ++ + VF ++ + G+ P T+ L+ + G
Sbjct: 297 SYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTF------------TSLIHVMCKAG 344
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ AV VR M +RG+ + L C G DA+L V +K R KP + +
Sbjct: 345 NLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCR-IKPSVVCY 403
Query: 436 TGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
LI G +D+ + M+ +P++ T + ++ Y +N A EL ++
Sbjct: 404 NALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLE 463
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
+ PD TYSS++ + ++K M G Q D+ +
Sbjct: 464 KG-------------VLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTS 510
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
L+ + G D +++AG +P + ++ +LI + +S
Sbjct: 511 LIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYS-VLINGLSKS 553
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 78/200 (39%), Gaps = 14/200 (7%)
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+ L+ + GH + +SI + M+ C PN+ T N ++ + R A+ L
Sbjct: 188 PNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERL 247
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
LKP+ T++SM+ A + E V+ M G D
Sbjct: 248 VGMMREGG-------------LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPD 294
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+ L+ +AG H F + + G +P + FT ++ N E+AV L+
Sbjct: 295 GVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVR 354
Query: 609 AMAYAPFHITERQWTELFES 628
M + E +T L +
Sbjct: 355 QMRERGLQMNEVTFTALIDG 374
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/356 (17%), Positives = 133/356 (37%), Gaps = 44/356 (12%)
Query: 303 RKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
R+ +D +L P++ YN ++ A K + + +R +G P+ TY
Sbjct: 175 RRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTY------ 228
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
LV AF+ G+++ A V M + G+ + + +C G+ +DA V
Sbjct: 229 ------NTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKV 282
Query: 419 VEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVY 476
+++ +R P +++ L+ G + +S+F M + P++ T +++ V
Sbjct: 283 FDEM--VREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVM 340
Query: 477 SRNDMFSKA----KELFEETTRANSSGYTFLSGDG-------------------APLKPD 513
+ +A +++ E + N +T L DG +KP
Sbjct: 341 CKAGNLERAVTLVRQMRERGLQMNEVTFTALI-DGFCKKGFLDDALLAVRGMKQCRIKPS 399
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
Y++++ + + + M G + D ++ ++ + H
Sbjct: 400 VVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQ 459
Query: 574 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESN 629
+LE G +P + ++ ++ + A L M E +T L + +
Sbjct: 460 QMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGH 515
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 139/340 (40%), Gaps = 45/340 (13%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S F Y ++ L K G + R+F + + + L PD+ Y+S+ G+VG L+E+ L
Sbjct: 288 SVFTYNVMIDYLCKEGDLENSRRLF-VQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASL 346
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
M+ D PD++ YN ++N + F F +++ +GLK
Sbjct: 347 FNEMK---------------DVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLK 391
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P+ TY L+ AF +EG + A+ +M + G++ Y L
Sbjct: 392 PNVVTY------------STLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDAN 439
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 464
C G +A ++ + L+ L I T+T L+ G + + +F+ M KD P
Sbjct: 440 CKAGNLTEAWKLLNDM--LQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISP 497
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
N A++ Y + + A ++ ++ T N +KPD Y S++
Sbjct: 498 NQQVYTALVHGYIKAERMEDAMKILKQMTECN-------------IKPDLILYGSIIWGH 544
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+ + E + + + M G + ++ +AGK
Sbjct: 545 CSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGK 584
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 36/268 (13%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
LVR F+ N+ + A G+ + Y + LC G +++ + +++ +
Sbjct: 272 LVRKFF-----NDMIGA-------GIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMG 319
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKA 485
S P +T+ LI G +++ S+F MKD C P+I T N ++ Y + + +A
Sbjct: 320 LS-PDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRA 378
Query: 486 KELFEET----TRANSSGYT------------------FLSGDGAPLKPDEYTYSSMLEA 523
E F E + N Y+ F+ L P+E+TY+S+++A
Sbjct: 379 FEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDA 438
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
+ A + M +G +L+ + LL +AG+ E F S+L+ G P+
Sbjct: 439 NCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPN 498
Query: 584 PLFFTEMLIQAIVQSNYEKAVALINAMA 611
+T ++ I E A+ ++ M
Sbjct: 499 QQVYTALVHGYIKAERMEDAMKILKQMT 526
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/387 (18%), Positives = 153/387 (39%), Gaps = 43/387 (11%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
L + F YT L+ KAG EA ++ N ML+ + +I Y ++ L + G + E
Sbjct: 426 LPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQ-AGVKLNIVTYTALLDGLCKAGRMIEAE 484
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
++ M + + P+ VY A+++ + + + + + KQ+ +
Sbjct: 485 EVFRSMLKDG---------------ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 529
Query: 345 LKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
+KP YG ++ + K+ E + M+ RG+ + +
Sbjct: 530 IKPDLILYG------------SIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIID 577
Query: 405 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCE 463
G+ DA+ ++++ + + +T+ LI G ++ + F M +
Sbjct: 578 AYFKAGKSSDALNFFQEMQDVGVEATI-VTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQ 636
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
PN+ +++ +N+ AK+LF+E G T PD ++++++
Sbjct: 637 PNVAVYTSLIDGLCKNNCIESAKKLFDEM---QCRGMT----------PDITAFTALIDG 683
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
+ + + M + D + L+ S+ G+ H F+ ++E G +P
Sbjct: 684 NLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPE 743
Query: 584 PLFFTEMLIQAIVQSNYEKAVALINAM 610
+ +L + + ++A+ L N M
Sbjct: 744 EVLCICLLREYYKRGQLDEAIELKNEM 770
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 131/318 (41%), Gaps = 33/318 (10%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
WK + M Q+G+ LL GL G +A V + LKD + VYT L
Sbjct: 449 WKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM--LKDGISPNQQ-VYTAL 505
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ KA R +A++I M E CN+ PD+ Y S+ L+E ++E M+ +
Sbjct: 506 VHGYIKAERMEDAMKILKQMTE-CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 564
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ + V+ +++A + + F++++ G++ + TY
Sbjct: 565 ---------------ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYC- 608
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
VL+ + G + AV M G+ +VY L LC N +
Sbjct: 609 -----------VLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIES 657
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAML 473
A + ++++ R P FT LI ++ G++ + + + M + E ++ +++
Sbjct: 658 AKKLFDEMQC-RGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLV 716
Query: 474 KVYSRNDMFSKAKELFEE 491
+S+ +A++ F E
Sbjct: 717 SGFSQCGELHQARKFFNE 734
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 147/348 (42%), Gaps = 51/348 (14%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
K GR +AL M +PD ++++ L + G +K +++++ M Q+
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE------ 324
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+DP D+ YN+V++ + K Q+ P+ TY
Sbjct: 325 -----GYDP----DVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTY------- 368
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
L+ +E ++ EA R + +G++ + L LC + AM +
Sbjct: 369 -----NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSR 478
E+++S + +P E T+ LI S G +D+ +++ + M+ C ++ T N ++ + +
Sbjct: 424 EEMRS-KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 479 NDMFSKAKELFEE-----TTRANSSGYTFLSG--------DGAPL---------KPDEYT 516
+ +A+E+F+E +R + + T + G D + L KPD++T
Sbjct: 483 ANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFT 542
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
Y+S+L + + + M +GC+ D + L+ +AG+
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 122/290 (42%), Gaps = 46/290 (15%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
++ + L+ L KAG A+ I ++ML++ PD+ Y+SV L ++G +KE V+ +
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQE-GYDPDVYTYNSVISGLCKLGEVKEAVEFL 353
Query: 288 ERMRQK---PSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLNACVPS 327
++M + P+ N + R + PD+ +N+++ +
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMES------------------YRRCLLKV--- 366
+ +F+++R G +P TY + ++S C V
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 367 --LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
L+ F + KI EA ME GV + Y L LC + R +DA +++++
Sbjct: 474 NTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQM-I 532
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 473
+ KP + T+ L+ GG I I Q M + CEP+I T ++
Sbjct: 533 MEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/448 (18%), Positives = 154/448 (34%), Gaps = 106/448 (23%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
KLL L ALR+FNL + N P+ A Y + + LG+ G ++ K++E M+
Sbjct: 51 VKLLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMK 110
Query: 292 QKPSKR---------------------IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
+ + +H D L+PD YN +LN V +
Sbjct: 111 NSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNL 170
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-----------------------LLKVL 367
K V ++ G+KP +T+ + +++ R +
Sbjct: 171 KLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTI 230
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
++ + EEG ++ A+ M + G + + C GR +DA+ ++++ +
Sbjct: 231 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 290
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIF-------------------------------- 455
P + TF L+ GH+ I I
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 456 ----QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT------------------ 493
Q + C PN T N ++ + + +A EL T
Sbjct: 351 EFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 494 ------RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
R + + G +PDE+TY+ ++++ + + + + K M LSGC
Sbjct: 411 CLTRNHRVAMELFEEMRSKGC--EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSL 575
+ L+ +A K E FD +
Sbjct: 469 SVITYNTLIDGFCKANKIREAEEIFDEM 496
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/384 (20%), Positives = 162/384 (42%), Gaps = 46/384 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
VYT ++ I+G+ G +A +F M L D ++ ++ ++ G+ G + + L+
Sbjct: 76 VYTIMIGIMGREGMLDKASELFEDMPLNDVEW--NVYSFTALINAYGRNGQHEASLHLLA 133
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH-QWKGVFWVFKQLRKSGLKP 347
RM+++ + P+L+ YN V+NAC +W+G+ +F Q+R G++P
Sbjct: 134 RMKREK---------------VTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQP 178
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
TY L+ A G + EA R M + GVV + Y L
Sbjct: 179 DIITY------------NTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYG 226
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI 466
R + ++ +++ ++ P + + LI + G +F+ M++ C P++
Sbjct: 227 QADRHEGVGELLREMEQAGNA-PDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDV 285
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T + +L+ Y ++ + + + LF + + +PD TY+++++
Sbjct: 286 VTFSTLLEAYGKHGCYDEVRLLFTDMKERGT-------------EPDVNTYNTLIQVFGQ 332
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
++ ++ + G + D + +A LL + G + +L++ P
Sbjct: 333 GGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDG 392
Query: 587 FTEMLIQAIVQSNYEKAVALINAM 610
FT ++ + Y +A N+M
Sbjct: 393 FTGLITAYGNAALYSEATYAFNSM 416
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 147/378 (38%), Gaps = 54/378 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y LL+ G EA +F M E + PD Y+++ GQ + + +L+
Sbjct: 181 ITYNTLLSACSSRGLVEEAGMVFRTMNE-AGVVPDSITYNALVDIYGQADRHEGVGELLR 239
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M Q + PD+V YN ++ A + +++ +FKQ++++G P
Sbjct: 240 EMEQAGNA---------------PDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPD 284
Query: 349 AATYGLAMESYRR--CLLKV---------------------LVRAFWEEGKINEAVAAVR 385
T+ +E+Y + C +V L++ F + G E++
Sbjct: 285 VVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFW 344
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
++ GV S Y L C G A + + + P FTGLI + +
Sbjct: 345 DLLDGGVEPDMSTYAGLLYS-CGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNA 403
Query: 446 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+ F MK+ C+P++ T NA++ ++ ++ +A S Y +
Sbjct: 404 ALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEA-----------GSAYLTMI 452
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+G + D TY+S++EA ++ + M + C ++ + L+ AG
Sbjct: 453 DEG--ISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGL 510
Query: 565 CHLLEHAFDSLLEAGEIP 582
+ F L GE+P
Sbjct: 511 FDEAKAQFLDLQVGGELP 528
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 156/371 (42%), Gaps = 55/371 (14%)
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
+ L V +K K + F YT+L+ LGK GR +A +F ML+D PD+ +++
Sbjct: 283 AALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKD-GCKPDVVLINNL 341
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH-- 328
LG+ G L++ +KL +M P++V YN V+ A S
Sbjct: 342 INILGRAGRLEDALKLFGKMDSLQCA---------------PNVVTYNTVIKAIFESKAP 386
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ W F++++ +G+ PS+ TY +L+ F + ++ +A+ + M+
Sbjct: 387 ASEAALW-FEKMKANGIAPSSFTYA------------ILIDGFCKTNRVEKALLLLEEMD 433
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
++G + Y L L R++ A + +++K + + +I + G +
Sbjct: 434 EKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKE-NCGRSSARVYAVMIKHFGNCGRL 492
Query: 449 DDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE-----TTRANSSGYTF 502
D + +F + K C P++ T NA++ R M +A L T S
Sbjct: 493 SDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNII 552
Query: 503 LSG---DGAP--------------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
L+G G P + PD +Y+++L + A +E + + M L G
Sbjct: 553 LNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGF 612
Query: 546 QLDQTKHAWLL 556
+ D ++ +L
Sbjct: 613 EYDSITYSSIL 623
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 102/560 (18%), Positives = 213/560 (38%), Gaps = 89/560 (15%)
Query: 127 VLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSG 185
VLD DV++ + + +W +++ ++ ++ L+ L E + + W+ ++ M +S
Sbjct: 97 VLDIDVEIRAKI--QFFKWAGKRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSP 154
Query: 186 LMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH 245
+ ++LK LG +A+SV Y +K ++ + VY L+ +L G
Sbjct: 155 CSVGPAEWSEILKILGKAKMVNKALSVF---YQIKGRKCNPTATVYNTLILMLMHEGHHE 211
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRI---- 298
+ ++N + + N PD Y ++ G++ +L + M++ P+++I
Sbjct: 212 KIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTI 271
Query: 299 -----------------KNMHRKNWDPVL------------------------------- 310
+ M K P +
Sbjct: 272 LAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGC 331
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+PD+V+ N ++N + + + +F ++ P+ TY +++A
Sbjct: 332 KPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYN------------TVIKA 379
Query: 371 FWE-EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+E + +EA M+ G+ ++ Y L C R + A+L++E++ +
Sbjct: 380 IFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDE-KGFP 438
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKEL 488
P + LI S + +FQ +K++C + V A M+K + S A +L
Sbjct: 439 PCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDL 498
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F E + S PD YTY++++ A + + + M +GC D
Sbjct: 499 FCEXEKLGCS-------------PDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPD 545
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
H +L ++ G F + E+ +P + + +L +E A L+
Sbjct: 546 IKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMR 605
Query: 609 AMAYAPFHITERQWTELFES 628
M F ++ + E+
Sbjct: 606 EMKLKGFEYDSITYSSILEA 625
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 166/404 (41%), Gaps = 47/404 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L +G ++A+S+L + G ++ + Y L+A +AG A R+ +ML
Sbjct: 156 LIRALCGRGHRKEALSILRDMRGAGCGPNVVT---YNTLVAAFFRAGEVDGAERLVGMML 212
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D L P++ ++S+ + + G +++ K+ + M ++ L PD V
Sbjct: 213 -DGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREG---------------LAPDGV 256
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN ++ + VF ++ + G+ P T+ L+ + G
Sbjct: 257 SYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTF------------TSLIHVMCKAG 304
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ AV VR M +RG+ + L C G DA+L V ++ R KP + +
Sbjct: 305 NLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCR-IKPSVVCY 363
Query: 436 TGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
LI G +D+ + M+ +P++ T + ++ Y +N A EL ++
Sbjct: 364 NALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLE 423
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
+ PD TYSS++ + ++K M G Q D+ +
Sbjct: 424 KG-------------VLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTS 470
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
L+ + G D +++AG +P + ++ +LI + +S
Sbjct: 471 LIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYS-VLINGLSKS 513
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 14/200 (7%)
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+ LI + GH + +SI + M+ C PN+ T N ++ + R A+ L
Sbjct: 148 PNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERL 207
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
DG LKP+ T++SM+ A + E V+ M G D
Sbjct: 208 VGMML------------DGG-LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPD 254
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+ L+ +AG H F + + G +P + FT ++ N E AV L+
Sbjct: 255 GVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVR 314
Query: 609 AMAYAPFHITERQWTELFES 628
M + E +T L +
Sbjct: 315 QMRERGLQMNEVTFTALIDG 334
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 136/378 (35%), Gaps = 85/378 (22%)
Query: 303 RKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
R+ +D +L P++ YN ++ A K + + +R +G P+ TY + +
Sbjct: 135 RRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAA 194
Query: 359 YRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+ R +V + GK+ +A M + G+
Sbjct: 195 FFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPD 254
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI---------------- 439
Y L C G +A+ V ++ + P +TFT LI
Sbjct: 255 GVSYNTLVGGYCKAGCSHEALSVFAEMTQ-KGIMPDVVTFTSLIHVMCKAGNLEWAVTLV 313
Query: 440 ---------------ISSMDG----GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRN 479
+ +DG G +DD + + M+ +P++ NA++ Y
Sbjct: 314 RQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMV 373
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA-TAHQWEYFEYVYK 538
+A+EL E + LKPD TYS+++ A FE + +
Sbjct: 374 GRMDEARELLHEM-------------EAKGLKPDVVTYSTIISAYCKNCDTHSAFE-LNQ 419
Query: 539 GMALSGCQLDQTKHAWL---LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
M G D ++ L L E R H+L F ++++ G P +T ++
Sbjct: 420 QMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVL---FKNMIKLGLQPDEFTYTSLIDGHC 476
Query: 596 VQSNYEKAVALINAMAYA 613
+ N E+A++L + M A
Sbjct: 477 KEGNVERALSLHDKMVKA 494
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/436 (19%), Positives = 170/436 (38%), Gaps = 80/436 (18%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
YT L++ L +AG+ A+ ++ ML + C P++ Y+++ G G E++ +
Sbjct: 355 ITYTTLISGLDRAGKIDAAIGTYDEMLRNGCK--PNLCTYNALIKLHGVRGKFPEMMAVF 412
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ +R PD+V +N +L + V VFK+++KSG P
Sbjct: 413 DDLRSAG---------------FVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVP 457
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
TY + SY RC G ++++ + M + G+ S Y + L
Sbjct: 458 ERDTYVSLISSYSRC------------GLFDQSMEIYKRMIEAGIYPDISTYNAVLSALA 505
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--------- 458
GRW+ A + ++++L +P E++++ L+ + + +D ++ + +
Sbjct: 506 RGGRWEQAEKLFAEMENL-DCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHH 564
Query: 459 ---------------------------KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+ C +I +NAM+ VY +N M K +E+
Sbjct: 565 GLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSL 624
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
G+ + TY+S++ + E E + + SG + D+
Sbjct: 625 M-------------KGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYS 671
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ ++ R G+ F + +G IP + + + + S +E+A+ L+ M
Sbjct: 672 YNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMV 731
Query: 612 YAPFHITERQWTELFE 627
ER + + +
Sbjct: 732 TRGCKPNERTYNSILQ 747
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 179/438 (40%), Gaps = 97/438 (22%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL-KELVKLIER 289
YT L++ +A R +A+ +F M+ + + P I Y+ V ++ + K++V L++
Sbjct: 181 YTALVSAFSRASRFRDAVAVFRRMVAN-GIQPAIVTYNVVLHVYSKIAVPWKDVVALVDS 239
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ + P+ D YN +++ C +K VF ++R +G +P
Sbjct: 240 MKN------------DGIPL---DRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDK 284
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
T+ ++ Y + + +EA+ ++ ME G + Y L +
Sbjct: 285 VTFNSLLDVYGKARMH------------DEAIGVLKEMELGGCPPSVVTYNSLISSYVKD 332
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
G ++A + E+++ ++ +P IT+T LI G ID I + M ++ C+PN+ T
Sbjct: 333 GLLKEAAELKEEME-VKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCT 391
Query: 469 VNAM-----------------------------------LKVYSRNDMFSKAKELFEETT 493
NA+ L V+ +N + S+ +F+E
Sbjct: 392 YNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMK 451
Query: 494 RANSSGY-----TFLSGDG--------------------APLKPDEYTYSSMLEASATAH 528
+ SGY T++S A + PD TY+++L A A
Sbjct: 452 K---SGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGG 508
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH-AFDSLLEAGEIPHPLFF 587
+WE E ++ M C+ D+ ++ LL + A K ++ + D E E H L
Sbjct: 509 RWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVK 568
Query: 588 TEMLIQAIVQ--SNYEKA 603
T +L+ + V S EKA
Sbjct: 569 TLVLVNSKVNNLSETEKA 586
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 126/282 (44%), Gaps = 26/282 (9%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
EPD Y A+++A + +++ VF+++ +G++P+ TY + + Y + +
Sbjct: 175 EPDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSK------IAV 228
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
W+ + VA V +M+ G+ Y L C +++A V +++++ +P
Sbjct: 229 PWK-----DVVALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGF-EP 282
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
++TF L+ D+ I + + M+ C P++ T N+++ Y ++ + +A EL
Sbjct: 283 DKVTFNSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELK 342
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
EE ++PD TY++++ A + + Y M +GC+ +
Sbjct: 343 EEMEVKG-------------IQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNL 389
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ GK + FD L AG +P + + +L
Sbjct: 390 CTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLL 431
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 12/104 (11%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD YN ++ A Q K +F +++ SGL P TY + ++SY + +
Sbjct: 667 PDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSY-------VANSM 719
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+E EA+ VR M RG Y + C +G+ DA
Sbjct: 720 FE-----EAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKIADA 758
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 151/365 (41%), Gaps = 43/365 (11%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
R +A+ + + M+E PD ++++ L E V L+++M Q+
Sbjct: 165 RISDAVALVDQMVE-MGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGC------- 216
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
+PDLV Y AV+N + K++ K ++ Y
Sbjct: 217 --------QPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY---------- 258
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
++ + I++A A ME +G+ Y L CLCN GRW DA ++ +
Sbjct: 259 --NTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNM 316
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 481
R P +TF+ LI + + G + + ++ M K +P+I T ++++ + +D
Sbjct: 317 IE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
+AK +FE +S D P+ TY+++++ A + E +++ M+
Sbjct: 376 LDEAKHMFE----------LMISKDCF---PNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 601
G + + L+ +AG C + + F ++ G P + ++ +L E
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 602 KAVAL 606
KA+ +
Sbjct: 483 KALVV 487
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/312 (20%), Positives = 123/312 (39%), Gaps = 37/312 (11%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
EPD+V +++LN S + + Q+ + G KP T+ L+
Sbjct: 147 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTF------------NTLIHG 194
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ K +EAVA V M QRG Y + LC G A+ +++K++ +
Sbjct: 195 LFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEAD 254
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+ + + +I HIDD ++F M+ P++ T N+++ +S A L
Sbjct: 255 V-VIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLL 313
Query: 490 EETT--RANSSGYTFLSGDGAPLK--------------------PDEYTYSSMLEASATA 527
+ N + TF + A +K PD +TYSS++
Sbjct: 314 SNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
+ + +++++ M C + + L+ +A + F + + G + + + +
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 588 TEMLIQAIVQSN 599
LIQ + Q+
Sbjct: 434 NT-LIQGLFQAG 444
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 55/293 (18%), Positives = 111/293 (37%), Gaps = 72/293 (24%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y+ L+ R EA +F LM+ +DC +P++ Y+++ + ++E ++L
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDC--FPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 288 ERMRQK--------------------PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
M Q+ + + +K + PD++ Y+ +L+
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ + VF+ L+KS ++P TY +++ + GK+ +
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTY------------NIMIEGMCKAGKVEDG------- 519
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
++L C L SL+ KP I +T +I G
Sbjct: 520 ------------WDLFCSL-----------------SLKGVKPNVIIYTTMISGFCRKGL 550
Query: 448 IDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 499
++ ++F+ MK D P+ G N +++ R+ + + EL +E G
Sbjct: 551 KEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVG 603
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 126/292 (43%), Gaps = 39/292 (13%)
Query: 304 KNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ W+P++ PD++ YN +++A Q + L ++ P+ T
Sbjct: 150 RQWEPIITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDT 209
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y L L+RA+ G+++ A + M++ G+ TA+VY L
Sbjct: 210 YAL------------LLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARC 257
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 470
+ A+ V +++K R Z T+ +I + +F+ MK C+PNI T
Sbjct: 258 SEKAVEVYQRMKKERCRTNTZ-TYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYT 316
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
A++ ++R + KA+E+FEE +A +PD Y Y++++EA + A
Sbjct: 317 ALVNAFAREGLCEKAEEVFEEMQQAGH-------------EPDVYAYNALMEAYSRAGLP 363
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ ++ M GC+ D+ + L+ RAG E AF L + G P
Sbjct: 364 QGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRP 415
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 146/394 (37%), Gaps = 76/394 (19%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K +R + Y ++ + GKA +P +LR+F M + P+I Y ++ + G
Sbjct: 268 MKKERCRTNTZTYXLMINVYGKANQPMSSLRVFREM-KSVGCKPNICTYTALVNAFAREG 326
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
L ++ ++ E M+Q EPD+ YNA++ A + +G +F
Sbjct: 327 LCEKAEEVFEEMQQAGH---------------EPDVYAYNALMEAYSRAGLPQGASEIFS 371
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
+ G +P A+Y +LV AF G EA AA + ++Q+G+
Sbjct: 372 LMEHMGCEPDRASY------------NILVDAFGRAGLHQEAEAAFQELKQQGM------ 413
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
+P + L+ + G++ C + +
Sbjct: 414 ------------------------------RPTMKSHMLLLSAHARSGNVARCEEVMAQL 443
Query: 459 -KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL-KPDEYT 516
K P+ +NAML Y R + LF R GDGA PD T
Sbjct: 444 HKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMER----------GDGASAGAPDTST 493
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
Y+ ++ A A + E ++ +A G D + +R + F+ ++
Sbjct: 494 YNVLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMV 553
Query: 577 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+AG P +L + E+ A++ +M
Sbjct: 554 DAGCYPDAGTAKVLLAACSDERQVEQVTAIVRSM 587
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 141/347 (40%), Gaps = 48/347 (13%)
Query: 304 KNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K WD ++ PD++ YN +++A +K + +L ++ P+ T
Sbjct: 184 KQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDT 243
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y L L++A+ G + +A A M + G +A VY L G
Sbjct: 244 YAL------------LLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGD 291
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
Q A+ + E++K R +P T+T LI + +F M+ C+PNI T
Sbjct: 292 TQKAVEIFERMKRDR-CQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFT 350
Query: 471 AMLKVYSRNDMFSKAKELFEETTRA----------------NSSGYTFLSGDGAPL---- 510
A++ ++R + KA+E+FE+ A + +G+ + + + L
Sbjct: 351 ALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 410
Query: 511 --KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
+PD +Y+ M++A A E + V++ M G H LL SRAGK
Sbjct: 411 GCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKC 470
Query: 569 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
E + + ++G P ML +EK ++ AM P+
Sbjct: 471 EEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPY 517
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 148/366 (40%), Gaps = 48/366 (13%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML- 255
+ GL G ++A+ + + +K R S YT L+ + GKA + + AL++F+ M
Sbjct: 283 IDGLMKGGDTQKAVEIFER---MKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRS 339
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ C P+I + ++ + GL ++ ++ E++++ LEPD+
Sbjct: 340 QKCK--PNICTFTALVNAFAREGLCEKAEEIFEQLQEAG---------------LEPDVY 382
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YNA++ A + G +F ++ G +P A+Y + +++Y R G
Sbjct: 383 AYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR------------AG 430
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+A A M++ G+ T + L G+ +V ++ KP
Sbjct: 431 LHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHK-SGIKPDTFVL 489
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
++ G + + M+ P +I T N ++ +Y R F++ +ELF
Sbjct: 490 NSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPA 549
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
N L PD T++S + A + Q+ V++ M +GC D
Sbjct: 550 RN-------------LIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKV 596
Query: 555 LLVEAS 560
LL S
Sbjct: 597 LLSACS 602
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 121/323 (37%), Gaps = 38/323 (11%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR---------- 361
P VVYNA ++ + + +F+++++ +PS ATY + + Y +
Sbjct: 274 PSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKV 333
Query: 362 -------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
C LV AF EG +A +++ G+ Y L
Sbjct: 334 FHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSR 393
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 467
G A + ++ + +P ++ ++ + G +D ++F+ MK P +
Sbjct: 394 AGFPYGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMK 452
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
+ +L YSR +K +E+ + ++ +KPD + +SML
Sbjct: 453 SHMLLLSAYSRAGKVAKCEEIVNQMHKSG-------------IKPDTFVLNSMLNLYGRL 499
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
Q+E E V M D + + L+ RAG +E F SL IP + +
Sbjct: 500 GQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTW 559
Query: 588 TEMLIQAIVQSNYEKAVALINAM 610
T + + Y + + + M
Sbjct: 560 TSRIGAYSRRKQYNRCLEVFEEM 582
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 103/485 (21%), Positives = 188/485 (38%), Gaps = 65/485 (13%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L + K L +G RQ +VL+ ++ + + + Y L+ +L ++G EAL ++
Sbjct: 161 LTIFKALSIRGGLRQMTTVLN---KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRR 217
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQ-------VGLLKELVKLIER-------------MRQK 293
M+ + L P + Y ++ V LG+ + LLKE+ L R R
Sbjct: 218 MVSE-GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAG 276
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ R+ D PDLV Y +++A + Q + +F +++ +G KP Y
Sbjct: 277 KIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYI 336
Query: 354 LAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
++ + +LV + +EA A M ++
Sbjct: 337 TLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQ 396
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
G++ Y L C L GR +DA+ +++ ++S+ +P T+ I G
Sbjct: 397 GILPNLHTYNTLICGLLRAGRIEDALKLLDTMESV-GVQPTAYTYITFIDYFGKSGETGK 455
Query: 451 CISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
+ F+ MK PNI NA L + +AK +F R N
Sbjct: 456 AVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFN-GLRENG------------ 502
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
L PD TY+ M++ + Q + + M +GC+ D L+ +AG+
Sbjct: 503 LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562
Query: 570 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY---APFHITERQWTELF 626
FD + + P + + +L + +KA+ L +M +P I+ + F
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCF 622
Query: 627 ESNED 631
N++
Sbjct: 623 CKNDE 627
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 126/318 (39%), Gaps = 53/318 (16%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD ++ + G+ G + EL +L + M S+R K PD + YN V+
Sbjct: 821 PDAFTFNMLLAVHGKSGKITELFELYKEM---ISRRCK------------PDAITYNIVI 865
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC------------------- 362
++ S+ F L S +P+ TYG ++ +
Sbjct: 866 SSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK 925
Query: 363 ----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
+ +L+ + + G A + M G+ Y L CLC GR +A+
Sbjct: 926 PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY 985
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 477
++KS P I + +I +++ ++++ M++ P++ T N+++
Sbjct: 986 FNELKS-TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLG 1044
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
M +AK ++EE A L+PD +TY++++ + + E+ VY
Sbjct: 1045 LAGMVEQAKRMYEELQLAG-------------LEPDVFTYNALIRGYSLSENPEHAYTVY 1091
Query: 538 KGMALSGCQLDQTKHAWL 555
K M + GC + +A L
Sbjct: 1092 KNMMVDGCNPNIGTYAQL 1109
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 143/347 (41%), Gaps = 60/347 (17%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
V L+ L KAGR EA ++F+ M +D L P + Y+++ LG+ G +++ ++L E
Sbjct: 544 VVNSLIDSLYKAGRVDEAWQMFDRM-KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 602
Query: 290 MRQK---PSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
M K P+ N M K +PD++ YN V+ + ++
Sbjct: 603 MIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK 662
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-------------LLKV---LVRAFWE 373
FW F QL+KS + P T + +C + +V + R+FWE
Sbjct: 663 VNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWE 721
Query: 374 --------EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
E ++++A+ + G+ S L LC + R A + +K
Sbjct: 722 DLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKK 781
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSK 484
P ++ LI ++ + + +F+ MK+ C P+ T N +L V+ ++ ++
Sbjct: 782 LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE 841
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
EL++E KPD TY+ ++ + A ++ +
Sbjct: 842 LFELYKEMISRRC-------------KPDAITYNIVISSLAKSNNLD 875
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 105/257 (40%), Gaps = 30/257 (11%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
LD+ Y L + Y L+ L K GR EA+R+F M D P+ A ++ +
Sbjct: 878 LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM-SDYGCKPNCAIFNILIN 936
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
G++G + +L +RM + + PDL Y +++ + +
Sbjct: 937 GYGKIGDTETACQLFKRMVNEG---------------IRPDLKSYTILVDCLCLAGRVDE 981
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+ F +L+ +GL P Y ++ + ++ EA+A M RG+
Sbjct: 982 ALYYFNELKSTGLDPDFIAY------------NRIINGLGKSQRMEEALALYNEMRNRGI 1029
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 452
V Y L L G + A + E+++ L +P T+ LI + +
Sbjct: 1030 VPDLYTYNSLMLNLGLAGMVEQAKRMYEELQ-LAGLEPDVFTYNALIRGYSLSENPEHAY 1088
Query: 453 SIFQHMK-DHCEPNIGT 468
+++++M D C PNIGT
Sbjct: 1089 TVYKNMMVDGCNPNIGT 1105
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 74/178 (41%), Gaps = 24/178 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G G A + + + DLKS YT L+ L AGR EAL FN L
Sbjct: 934 LINGYGKIGDTETACQLFKRMVNEGIRPDLKS---YTILVDCLCLAGRVDEALYYFN-EL 989
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP--------------------S 295
+ L PD AY+ + LG+ ++E + L MR +
Sbjct: 990 KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
++ K M+ + LEPD+ YNA++ S + + V+K + G P+ TY
Sbjct: 1050 EQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYA 1107
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 115/324 (35%), Gaps = 36/324 (11%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ P L YN ++ + H + + +FK ++ G P A T+ + L+
Sbjct: 784 ISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNM------------LLA 831
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+ GKI E + M R A Y + L + A+ + S +
Sbjct: 832 VHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVS-SDFR 890
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+ LI G +++ + +F+ M D+ C+PN N ++ Y + A +L
Sbjct: 891 PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950
Query: 489 FE----ETTRANSSGYTFLSG------------------DGAPLKPDEYTYSSMLEASAT 526
F+ E R + YT L L PD Y+ ++
Sbjct: 951 FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
+ + E +Y M G D + L++ AG + ++ L AG P
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFT 1070
Query: 587 FTEMLIQAIVQSNYEKAVALINAM 610
+ ++ + N E A + M
Sbjct: 1071 YNALIRGYSLSENPEHAYTVYKNM 1094
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 83/210 (39%), Gaps = 23/210 (10%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
+R + +A +++ L++ K F + S T L+ GL G +
Sbjct: 852 RRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEE 911
Query: 209 AMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
AM + + + YG K + ++ L+ GK G A ++F M+ + + PD+ +
Sbjct: 912 AMRLFEEMSDYGCK-----PNCAIFNILINGYGKIGDTETACQLFKRMVNE-GIRPDLKS 965
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y + L G + E + ++ L+PD + YN ++N
Sbjct: 966 YTILVDCLCLAGRVDEALYYFNELKSTG---------------LDPDFIAYNRIINGLGK 1010
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
S + + ++ ++R G+ P TY M
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040
>gi|145517919|ref|XP_001444837.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412270|emb|CAK77440.1| unnamed protein product [Paramecium tetraurelia]
Length = 981
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 96/457 (21%), Positives = 196/457 (42%), Gaps = 66/457 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDW--VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+KG G K A+++ + + G+K +R + LL K + + A R F
Sbjct: 434 LIKGCGRKKRLNDALNLFEEMKLIGIK-----PNRISFNSLLDSCVKCNKMNIAWRYFEE 488
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M + ++PD Y +L +K R + + I + + +PD
Sbjct: 489 MRKQYGIFPDNFTY----------SILVNGIKTNHSNRDELLRAITLLEQIQETGQFKPD 538
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
++YN++++ACV ++ + +F++++ ++PS+ TYG +L++A+ +
Sbjct: 539 EILYNSLIDACVKFNEIQKGMELFREMKNKQIEPSSVTYG------------ILIKAYGK 586
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE- 432
+ +N A M+Q+ + Y L N R A+ ++++KS + P+
Sbjct: 587 QNDLNGAFKIFEEMKQKKIPINDVTYGCLVDACVRNDRLDQALQFIDQMKS--QNLPINT 644
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKD--HCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ +T +I ++ I F MK PN+ T N++L +N + ++A +LF+
Sbjct: 645 VLYTTIIKGFCKLNQTEEAIKYFDLMKQSPKTYPNLITYNSLLDGMVKNGLLNQADKLFQ 704
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL--D 548
E + +KPD T+S++L+ + + M +G Q+ D
Sbjct: 705 ELV-------------DSKIKPDLITFSTLLKGHCRKGNMKRLNETVQIM--TGLQISPD 749
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
++ +L + H+ FD +IP T++L+ I +K L+
Sbjct: 750 ESLLQLILEACLNQQQYHIGVQIFDQF--CHQIPQS---TQLLLTIIRLHCLDK--KLVQ 802
Query: 609 AMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL 645
AM+ + R + + +E+R+ LE+ +N+L
Sbjct: 803 AMS-----LLNRLYQLM---DENRVQHQFLEQTINSL 831
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 114/270 (42%), Gaps = 34/270 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY--PDIAAYHSVAVTLGQVGLLKELVKL 286
F YT L+ G + L++ + E+ Y PD Y+ + G L +L
Sbjct: 357 FTYTTLIN--GLKNSDNMDLKLAFSLFEEYKQYNQPDQIIYNCLLDACINAGDLNRGFQL 414
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ M+Q + ++ D + YN ++ C + +F++++ G+K
Sbjct: 415 LNEMKQSQT--------------IQLDEITYNTLIKGCGRKKRLNDALNLFEEMKLIGIK 460
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P+ ++ ++S +C + ++EE + +Q G+ Y L +
Sbjct: 461 PNRISFNSLLDSCVKCNKMNIAWRYFEEMR-----------KQYGIFPDNFTYSILVNGI 509
Query: 407 CNNGRWQDAML----VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-H 461
N +D +L ++E+I+ KP EI + LI + + I + +F+ MK+
Sbjct: 510 KTNHSNRDELLRAITLLEQIQETGQFKPDEILYNSLIDACVKFNEIQKGMELFREMKNKQ 569
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
EP+ T ++K Y + + + A ++FEE
Sbjct: 570 IEPSSVTYGILIKAYGKQNDLNGAFKIFEE 599
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 102/268 (38%), Gaps = 58/268 (21%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-----GLA--------- 355
++P +V N +++ ++Q + + F+ L+ + KP TY GL
Sbjct: 317 IQPTIVTINTMIDQYFKNNQREKAWKTFENLKLTQTKPDNFTYTTLINGLKNSDNMDLKL 376
Query: 356 ----MESYRR----------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
E Y++ CLL + A G +N + M+Q + + Y
Sbjct: 377 AFSLFEEYKQYNQPDQIIYNCLLDACINA----GDLNRGFQLLNEMKQSQTIQLDEITYN 432
Query: 402 LACCLCN-NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 460
C R DA+ + E++K L KP I+F L+ S + ++ F+ M+
Sbjct: 433 TLIKGCGRKKRLNDALNLFEEMK-LIGIKPNRISFNSLLDSCVKCNKMNIAWRYFEEMRK 491
Query: 461 H--CEPNIGT----VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 514
P+ T VN + +S D +A L E+ + KPDE
Sbjct: 492 QYGIFPDNFTYSILVNGIKTNHSNRDELLRAITLLEQIQ------------ETGQFKPDE 539
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMAL 542
Y+S+++A F + KGM L
Sbjct: 540 ILYNSLIDACVK------FNEIQKGMEL 561
>gi|428186270|gb|EKX55120.1| hypothetical protein GUITHDRAFT_53115, partial [Guillardia theta
CCMP2712]
Length = 363
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 120/258 (46%), Gaps = 30/258 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ +T ++ K G AL++ M+ + P++ AY + + + + L+E
Sbjct: 134 YTFTAAISSCEKLGDWQRALKLLEEMIAK-GIQPNLQAYSAAISACEKAAEARPALGLLE 192
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
RM +++IK PD++VY+AV+ AC + W+ +F+++++ GL P
Sbjct: 193 RM---TNEKIK------------PDIIVYSAVMAACGKAGLWEPAARIFQKMKREGLTPD 237
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
Y +++Y+R G+ + A+ + ME+ GV Y E
Sbjct: 238 VVAYSTLIQAYQRA------------GEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAK 285
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
G W+ ++ ++E++K+ + +P + + +I + GG D +++ Q + +D +PNI
Sbjct: 286 AGEWRRSLGLLERMKADKL-RPDAVAYNFVISALSRGGQWDAGLTLLQMLEEDEAQPNIS 344
Query: 468 TVNAMLKVYSRNDMFSKA 485
T ++K N + KA
Sbjct: 345 TYCTVIKACGDNGQWEKA 362
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 138/313 (44%), Gaps = 37/313 (11%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+E L P +Y++ L + G +E + + + + + ++R K R L PD
Sbjct: 10 IEKEGLTPTRVSYNAAMSALTRNGRWREALSMFDSVFSQ-TERNKVAARS-----LRPDT 63
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V ++ ++AC +W+ ++ ++ G++P+ T+ L+ A +
Sbjct: 64 VTFSTAISACAKGGEWQRAMNMYHEMEAQGIEPNEFTFA------------ALITACEKG 111
Query: 375 GKINEAVAAVRNMEQRGVVGTASVY-YELACCLCNN-GRWQDAMLVVEKIKSLRHSKPLE 432
G++++A M+ RG+VG +VY + A C G WQ A+ ++E++ + + +P
Sbjct: 112 GQVSKAFEVFERMQARGIVG--NVYTFTAAISSCEKLGDWQRALKLLEEMIA-KGIQPNL 168
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
++ I + + + + M + +P+I +A++ + ++ A +F++
Sbjct: 169 QAYSAAISACEKAAEARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQK 228
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
R L PD YS++++A A +W V++ M +G + +
Sbjct: 229 MKREG-------------LTPDVVAYSTLIQAYQRAGEWSRALEVFQLMEKAGVRPNVIA 275
Query: 552 HAWLLVEASRAGK 564
+ + ++AG+
Sbjct: 276 YTEAIAACAKAGE 288
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 124/307 (40%), Gaps = 45/307 (14%)
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA---AVRNMEQRGV 392
V K + K GL P+ +Y AM + R G+ EA++ +V + +R
Sbjct: 6 VLKSIEKEGLTPTRVSYNAAMSALTR------------NGRWREALSMFDSVFSQTERNK 53
Query: 393 VGTAS-----VYYELACCLC-NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
V S V + A C G WQ AM + ++++ + +P E TF LI + GG
Sbjct: 54 VAARSLRPDTVTFSTAISACAKGGEWQRAMNMYHEMEA-QGIEPNEFTFAALITACEKGG 112
Query: 447 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT----RANSSGYT 501
+ +F+ M+ N+ T A + + + +A +L EE + N Y+
Sbjct: 113 QVSKAFEVFERMQARGIVGNVYTFTAAISSCEKLGDWQRALKLLEEMIAKGIQPNLQAYS 172
Query: 502 FL------SGDGAP------------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
+ + P +KPD YS+++ A A WE +++ M
Sbjct: 173 AAISACEKAAEARPALGLLERMTNEKIKPDIIVYSAVMAACGKAGLWEPAARIFQKMKRE 232
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
G D ++ L+ RAG+ F + +AG P+ + +TE + + ++
Sbjct: 233 GLTPDVVAYSTLIQAYQRAGEWSRALEVFQLMEKAGVRPNVIAYTEAIAACAKAGEWRRS 292
Query: 604 VALINAM 610
+ L+ M
Sbjct: 293 LGLLERM 299
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 150/395 (37%), Gaps = 89/395 (22%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ L Y ++A L KA +A+ + N M+++ + PD Y+S+ G
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYNSILHGYCSSGQP 282
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
KE + +++MR +EPD+V Y+ +++ + + +F +
Sbjct: 283 KEAIGFLKKMRSDG---------------VEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 341 RKSGLKPSAATYGLAMESY--------RRCLLKVLVR---------------AFWEEGKI 377
K GLKP TYG ++ Y LL ++VR A+ ++GK+
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
++A+ M Q+G+ A Y + LC +GR +DAML E++ S P I +
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS-PGNIVYNS 446
Query: 438 ----------------LIISSMDGGHIDDCISIFQHMKDHC------------------- 462
LI+ +D G + I + HC
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 463 -EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
+PN+ T N ++ Y +A +L LKP+ TYS+++
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG-------------LKPNTVTYSTLI 553
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ E ++K M SG D + +L
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/455 (20%), Positives = 167/455 (36%), Gaps = 83/455 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL AM ++ + + + + + F Y LL L R EAL + ++M
Sbjct: 128 LLKGLCADKRTSDAMDIV--LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMA 185
Query: 256 ED--CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
+D PD+ +Y +V G KE S + + + + D + PD
Sbjct: 186 DDRGGGSPPDVVSYTTVIN-----GFFKE----------GDSDKAYSTYHEMLDRGILPD 230
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
+V YN+++ A + V + K+G+ P TY ++ +
Sbjct: 231 VVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY------------NSILHGYCS 278
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
G+ EA+ ++ M GV Y L LC NGR +A + + + R KP EI
Sbjct: 279 SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK-RGLKP-EI 336
Query: 434 T------------------------------------FTGLIISSMDGGHIDDCISIFQH 457
T F+ LI + G +D + +F
Sbjct: 337 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSK 396
Query: 458 MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
M+ PN T A++ + ++ A FE+ L P
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG-------------LSPGNIV 443
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
Y+S++ T ++WE E + M G L+ ++ + G+ E F+ ++
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503
Query: 577 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
G P+ + + ++ + ++A+ L++ M
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 96/467 (20%), Positives = 183/467 (39%), Gaps = 98/467 (20%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D L + + K M + GL LL+G KG+ + +LD +
Sbjct: 306 LLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 365
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
D +V++ L+ K G+ +A+ +F+ M + L P+ Y +V L + G
Sbjct: 366 GIHPD---HYVFSILICAYAKQGKVDQAMLVFSKMRQQ-GLNPNAVTYGAVIGILCKSGR 421
Query: 280 LKELVKLIERMRQK---PSKRIKN--MHR----KNWD-------PVLEPDLVVYNAVLNA 323
+++ + E+M + P + N +H W+ +L+ + + N+
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 324 CVPSHQWKGVFW----VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
+ SH +G +F+ + + G+KP+ TY L+ + GK++E
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITY------------NTLINGYCLAGKMDE 529
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL---EITFT 436
A+ + M G+ Y L C R +DA+++ ++++S S + I
Sbjct: 530 AMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589
Query: 437 GLIIS-------------SMDGGHI------------------DDCISIFQHMKDHCEPN 465
GL + + G I DD + +FQ++ C +
Sbjct: 590 GLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL---CLMD 646
Query: 466 IG--------TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
+ ++A+LKV RND +AK+LF S +G L P+ +TY
Sbjct: 647 LKLEARTFNIMIDALLKV-GRND---EAKDLF-----------VAFSSNG--LVPNYWTY 689
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
M E E + ++ M +GC +D +++ E + G+
Sbjct: 690 RLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 141/347 (40%), Gaps = 48/347 (13%)
Query: 304 KNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K WD ++ PD++ YN +++A +K + +L ++ P+ T
Sbjct: 146 KQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDT 205
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y L L++A+ G + +A A M + G +A VY L G
Sbjct: 206 YAL------------LLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGD 253
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
Q A+ + E++K R +P T+T LI + +F M+ C+PNI T
Sbjct: 254 TQKAVEIFERMKRDR-CQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFT 312
Query: 471 AMLKVYSRNDMFSKAKELFEETTRA----------------NSSGYTFLSGDGAPL---- 510
A++ ++R + KA+E+FE+ A + +G+ + + + L
Sbjct: 313 ALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 372
Query: 511 --KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
+PD +Y+ M++A A E + V++ M G H LL SRAGK
Sbjct: 373 GCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKC 432
Query: 569 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
E + + ++G P ML +EK ++ AM P+
Sbjct: 433 EEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPY 479
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 148/368 (40%), Gaps = 48/368 (13%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML- 255
+ GL G ++A+ + + +K R S YT L+ + GKA + + AL++F+ M
Sbjct: 245 IDGLMKGGDTQKAVEIFER---MKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRS 301
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ C P+I + ++ + GL ++ ++ E++++ LEPD+
Sbjct: 302 QKCK--PNICTFTALVNAFAREGLCEKAEEIFEQLQEAG---------------LEPDVY 344
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YNA++ A + G +F ++ G +P A+Y + +++Y R G
Sbjct: 345 AYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR------------AG 392
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+A A M++ G+ T + L G+ +V ++ KP
Sbjct: 393 LHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHK-SGIKPDTFVL 451
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
++ G + + M+ P +I T N ++ +Y R F++ +ELF
Sbjct: 452 NSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPA 511
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
N L PD T++S + A + Q+ V++ M +GC D
Sbjct: 512 RN-------------LIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKV 558
Query: 555 LLVEASRA 562
LL S
Sbjct: 559 LLSACSNG 566
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 121/323 (37%), Gaps = 38/323 (11%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR---------- 361
P VVYNA ++ + + +F+++++ +PS ATY + + Y +
Sbjct: 236 PSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMALKV 295
Query: 362 -------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
C LV AF EG +A +++ G+ Y L
Sbjct: 296 FHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSR 355
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 467
G A + ++ + +P ++ ++ + G +D ++F+ MK P +
Sbjct: 356 AGFPYGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMK 414
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
+ +L YSR +K +E+ + ++ +KPD + +SML
Sbjct: 415 SHMLLLSAYSRAGKVAKCEEIVNQMHKSG-------------IKPDTFVLNSMLNLYGRL 461
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
Q+E E V M D + + L+ RAG +E F SL IP + +
Sbjct: 462 GQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTW 521
Query: 588 TEMLIQAIVQSNYEKAVALINAM 610
T + + Y + + + M
Sbjct: 522 TSRIGAYSRRKQYNRCLEVFEEM 544
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 149/376 (39%), Gaps = 69/376 (18%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ YT ++ L R HEA + M NL P++ Y + L + G + E V L+
Sbjct: 47 YTYTAVIHALCVENRLHEARKFLEEMANR-NLTPNVVTYTVLIDGLCKGGRVDEAVALLS 105
Query: 289 RMRQK--PSKRIKN----------MHRKNWDPVLE-------PDLVVYNAVLNACVPSHQ 329
+MR+K P+ N + +D + E PD+ Y ++ S +
Sbjct: 106 KMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 165
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
VF+QL G +P TY L+ +EG++ EA+ M +
Sbjct: 166 SDDALRVFEQLVARGFRPDVVTY------------SCLIDGLCKEGRLKEAIDLFGRMIK 213
Query: 390 RGVVGTASVYYE-LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
G +V Y L C G+ +AM ++E++ S P +T+T L+ +
Sbjct: 214 SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE-TGSSPDVVTYTTLMNGFCKLARL 272
Query: 449 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
DD + M + P++ T +++ R + S A + E R + S
Sbjct: 273 DDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCS--------- 323
Query: 508 APLKPDEYTYSSMLEASATAHQWE-----------------YFEYVYKGMALSGCQLDQT 550
P YTY+++L+ A+Q E F + +G+ C+++++
Sbjct: 324 ----PTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGL----CKVNRS 375
Query: 551 KHAWLLVEASRAGKCH 566
A LVE +R +C+
Sbjct: 376 SEAMELVEEARRRRCN 391
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/396 (19%), Positives = 155/396 (39%), Gaps = 55/396 (13%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
K+ A L+ L + E ++ + + M SG + L+ G
Sbjct: 109 KKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDD 168
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A+ V + + + D+ + Y+ L+ L K GR EA+ +F M++ + P+ Y+
Sbjct: 169 ALRVFEQLVARGFRPDVVT---YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 225
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSK------------------------RIKNMHRK 304
S+ ++G + E + L+ERM + S + M RK
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 285
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY----- 359
L PD+V + ++++ ++ + ++R+ P+ TY ++ Y
Sbjct: 286 G----LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341
Query: 360 ----RRCLLK------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
R+ +L+ +++R + + +EA+ V +R +Y +
Sbjct: 342 LEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVI 401
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE 463
LC + +A V K+ P IT++ LI + G +D +++ C
Sbjct: 402 DGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLD---RARGYIEKGCV 458
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 499
PNIGT N ++ + + + A+EL ++ + G
Sbjct: 459 PNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFGG 494
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/317 (18%), Positives = 130/317 (41%), Gaps = 21/317 (6%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L++ + ++ +A+ + M +G Y + LC R +A +E++ + R
Sbjct: 17 LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMAN-R 75
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
+ P +T+T LI GG +D+ +++ M+ C P T N+++ + + S+A
Sbjct: 76 NLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAY 135
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
+L EE + PD +TY++++ + + + V++ + G +
Sbjct: 136 DLLEEMVYSGCI-------------PDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE-IPHPLFFTEMLIQAIVQSNYEKAVA 605
D ++ L+ + G+ F ++++G +P+ + + ++ ++A+
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242
Query: 606 LINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALH 665
L+ MA +T L D LLN + +T ++L +
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL---MD 299
Query: 666 ALCRSEKERDLSSSAHF 682
LCR E LS + H
Sbjct: 300 GLCR---ENRLSDAVHI 313
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 122/305 (40%), Gaps = 37/305 (12%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+ Y AV++A ++ +++ L P+ TY VL+
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTY------------TVLIDGL 91
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ G+++EAVA + M ++ V TA Y L LC R +A ++E++ P
Sbjct: 92 CKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAERASEAYDLLEEM-VYSGCIPD 149
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFE 490
T+T LI DD + +F+ + P++ T + ++ + +A +LF
Sbjct: 150 IFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFG 209
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
++ S P+ TY+S++ + + + + MA +G D
Sbjct: 210 RMIKSGSC------------MPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVV 257
Query: 551 KHAWLLVEASRAGKCHL--LEHAFDSL---LEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
+ L+ G C L L+ A+D L G P + FT ++ ++ AV
Sbjct: 258 TYTTLM-----NGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVH 312
Query: 606 LINAM 610
++ M
Sbjct: 313 ILGEM 317
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 164/389 (42%), Gaps = 61/389 (15%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
TKL++ L + G+PHEA+ IFN + E+ + P I Y ++ L ++ + L+ ++
Sbjct: 47 TKLMSTLIRKGKPHEAVTIFNSLTEEGH-KPTIITYTTLVAALTRLKRFNSIPSLLSKVE 105
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ K PD +++NA++NA S + +F+++++ G KP+ +T
Sbjct: 106 ENGVK---------------PDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTST 150
Query: 352 YGLAMESY------------------------RRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ ++ + +L++A+ + ++ EA + M
Sbjct: 151 FNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKM 210
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGG 446
G+ Y LA NG +A ++ K++ + KP E T +I G
Sbjct: 211 VNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEG 270
Query: 447 HIDDCISIFQHMKD-HCEPNIGTVNAMLKVY---SRNDMFSKAKELFEETTRANSSGYTF 502
++ + + MK+ PN N+++K Y + D +A L EE
Sbjct: 271 NMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFG--------- 321
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
+KPD TYS+++ A +++ + E ++ M + + D ++ L RA
Sbjct: 322 -------IKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRA 374
Query: 563 GKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
G+ E +S+ + G + + FT ++
Sbjct: 375 GQPDKAEALLNSMTKYGLQANVVIFTTII 403
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 149/371 (40%), Gaps = 53/371 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
++ ++ +G+ HEA++IF M ++C P + ++++ G VG E +KL+E
Sbjct: 114 ILFNAMINAFSDSGKVHEAMKIFRKM-KECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLE 172
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M Q D ++P+ YN ++ A ++ + + V ++ SG++P
Sbjct: 173 MMIQ--------------DGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPD 218
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL-- 406
TY L RAF + G+ + A + M+Q E C +
Sbjct: 219 IVTY------------NTLARAFAQNGETDNAERLILKMQQ---YNNKVKPNERTCGIII 263
Query: 407 ---CNNGRWQDAMLVVEKIKSLR-HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH- 461
C G +A+ + K+K L H P + F LI +D D M++
Sbjct: 264 RGYCKEGNMTEALRFLYKMKELGVHPNP--VVFNSLIKGYLDITDTDGVEEALTLMEEFG 321
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
+P++ T + ++ +S + + +E+F++ +A ++PD YS +
Sbjct: 322 IKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAE-------------IEPDIQAYSILA 368
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
+ A Q + E + M G Q + ++ AGK ++ + E G
Sbjct: 369 KGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMG-T 427
Query: 582 PHPLFFTEMLI 592
P L E LI
Sbjct: 428 PLNLKTYETLI 438
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 133/305 (43%), Gaps = 40/305 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ D G +AM + +K+ + + L+ G GRPHEA+++ +M+
Sbjct: 119 MINAFSDSGKVHEAMKIFR---KMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMI 175
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+D N+ P+ Y+ + L+E ++ +M + ++PD+V
Sbjct: 176 QDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKM---------------VNSGMQPDIV 220
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRK--SGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
YN + A + + + ++++ + +KP+ T G +++R + +
Sbjct: 221 TYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCG------------IIIRGYCK 268
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELA---CCLCNNGRWQDAMLVVEKIKSLRHSKP 430
EG + EA+ + M++ GV V+ L + + ++A+ ++E+ KP
Sbjct: 269 EGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEF----GIKP 324
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+T++ ++ + G +D+C IF M K EP+I + + K Y R KA+ L
Sbjct: 325 DVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALL 384
Query: 490 EETTR 494
T+
Sbjct: 385 NSMTK 389
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 127/325 (39%), Gaps = 51/325 (15%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ S+ + K R M + G T L+KG G G +AM +L+ + ++
Sbjct: 119 MINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMM--IQ 176
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D + Y L+ EA + + M+ + + PDI Y+++A Q G
Sbjct: 177 DGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMV-NSGMQPDIVTYNTLARAFAQNGET 235
Query: 281 KELVKLIERMRQ-----KPSKRIKNMHRKNW-----------------DPVLEPDLVVYN 318
+LI +M+Q KP++R + + + + + P+ VV+N
Sbjct: 236 DNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFN 295
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL-------------- 364
+++ + GV + + G+KP TY M ++ L
Sbjct: 296 SLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKA 355
Query: 365 ---------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+L + + G+ ++A A + +M + G+ ++ + C G+ A
Sbjct: 356 EIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCA 415
Query: 416 MLVVEKIKSLRHSKPLEI-TFTGLI 439
+ + EK+ + PL + T+ LI
Sbjct: 416 LRLYEKMNEM--GTPLNLKTYETLI 438
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 149/376 (39%), Gaps = 69/376 (18%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ YT ++ L R HEA + M NL P++ Y + L + G + E V L+
Sbjct: 47 YTYTAVIHALCVENRLHEARKFLEEMANR-NLTPNVVTYTVLIDGLCKGGRVDEAVALLS 105
Query: 289 RMRQK--PSKRIKN----------MHRKNWDPVLE-------PDLVVYNAVLNACVPSHQ 329
+MR+K P+ N + +D + E PD+ Y ++ S +
Sbjct: 106 KMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 165
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
VF+QL G +P TY L+ +EG++ EA+ M +
Sbjct: 166 SDDALRVFEQLVARGFRPDVVTY------------SCLIDGLCKEGRLKEAIDLFGRMIK 213
Query: 390 RGVVGTASVYYE-LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
G +V Y L C G+ +AM ++E++ S P +T+T L+ +
Sbjct: 214 SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE-TGSSPDVVTYTTLMNGFCKLARL 272
Query: 449 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
DD + M + P++ T +++ R + S A + E R + S
Sbjct: 273 DDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCS--------- 323
Query: 508 APLKPDEYTYSSMLEASATAHQWE-----------------YFEYVYKGMALSGCQLDQT 550
P YTY+++L+ A+Q E F + +G+ C+++++
Sbjct: 324 ----PTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGL----CKVNRS 375
Query: 551 KHAWLLVEASRAGKCH 566
A LVE +R +C+
Sbjct: 376 SEAMELVEEARRRRCN 391
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/388 (19%), Positives = 153/388 (39%), Gaps = 55/388 (14%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
K+ A L+ L + E ++ + + M SG + L+ G
Sbjct: 109 KKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDD 168
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A+ V + + + D+ + Y+ L+ L K GR EA+ +F M++ + P+ Y+
Sbjct: 169 ALRVFEQLVARGFRPDVVT---YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 225
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSK------------------------RIKNMHRK 304
S+ ++G + E + L+ERM + S + M RK
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 285
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY----- 359
L PD+V + ++++ ++ + ++R+ P+ TY ++ Y
Sbjct: 286 G----LTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341
Query: 360 ----RRCLLK------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
R+ +L+ +++R + + +EA+ V +R +Y +
Sbjct: 342 LEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVI 401
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE 463
LC + +A V K+ P IT++ L+ + G +D +++ C
Sbjct: 402 DGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLD---RARGYIEKGCV 458
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEE 491
PNIGT N ++ + + + A+EL ++
Sbjct: 459 PNIGTYNLLIDAFRKANRDEDARELLDD 486
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/317 (18%), Positives = 130/317 (41%), Gaps = 21/317 (6%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L++ + ++ +A+ + M +G Y + LC R +A +E++ + R
Sbjct: 17 LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMAN-R 75
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
+ P +T+T LI GG +D+ +++ M+ C P T N+++ + + S+A
Sbjct: 76 NLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAY 135
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
+L EE + PD +TY++++ + + + V++ + G +
Sbjct: 136 DLLEEMVYSGCI-------------PDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE-IPHPLFFTEMLIQAIVQSNYEKAVA 605
D ++ L+ + G+ F ++++G +P+ + + ++ ++A+
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242
Query: 606 LINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALH 665
L+ MA +T L D LLN + +T ++L +
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL---MD 299
Query: 666 ALCRSEKERDLSSSAHF 682
LCR E LS + H
Sbjct: 300 GLCR---ENRLSDAVHI 313
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 122/305 (40%), Gaps = 37/305 (12%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+ Y AV++A ++ +++ L P+ TY VL+
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTY------------TVLIDGL 91
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ G+++EAVA + M ++ V TA Y L LC R +A ++E++ P
Sbjct: 92 CKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAERASEAYDLLEEM-VYSGCIPD 149
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFE 490
T+T LI DD + +F+ + P++ T + ++ + +A +LF
Sbjct: 150 IFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFG 209
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
++ S P+ TY+S++ + + + + MA +G D
Sbjct: 210 RMIKSGSC------------MPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVV 257
Query: 551 KHAWLLVEASRAGKCHL--LEHAFDSL---LEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
+ L+ G C L L+ A+D L G P + FT ++ ++ AV
Sbjct: 258 TYTTLM-----NGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVH 312
Query: 606 LINAM 610
++ M
Sbjct: 313 ILGEM 317
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 91/434 (20%), Positives = 173/434 (39%), Gaps = 61/434 (14%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVY-TKLLAILGKAGRPHE 246
FT G + L LG +A L + G+ + +Y T + A++ + G
Sbjct: 181 FTFGVAARALCRLG------RARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEA 234
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSK-----RI 298
A + ++L C D+ ++ V + L +G ++E +L++RM PS +
Sbjct: 235 ATLLDEMLLMGC--AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLL 292
Query: 299 KNMHRKN--------WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + R V E ++V+ N V+ C+ + +++ + G P
Sbjct: 293 RGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVH 352
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY +L+ + G+ AV + ME++G Y L C NG
Sbjct: 353 TY------------NILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNG 400
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
W DA +++++ + S + + G+I + G +D+ + + Q MK C+P+I T
Sbjct: 401 MWDDARAMLDQMSAKGFSMNSQ-GYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTY 459
Query: 470 NAMLKVYSRNDMFSKAKELF----EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
N ++ ND +A+ +F EE AN TY++++ A
Sbjct: 460 NTIIYHLCNNDQMDEAEHIFGNLLEEGVVANG-----------------ITYNTLIHALL 502
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+ +W+ + M L GC LD + L+ + G + ++ G P+
Sbjct: 503 HSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNN- 561
Query: 586 FFTEMLIQAIVQSN 599
F MLI + ++
Sbjct: 562 FSYNMLINELCKAG 575
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/318 (17%), Positives = 125/318 (39%), Gaps = 31/318 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ P YNAVL+ + +++++ + + P+ T+G+A R
Sbjct: 141 VTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA------------AR 188
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
A G+ +A+A +R M + G V A +Y + L G +A +++++ + +
Sbjct: 189 ALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAA 248
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
+ TF +++ GH+ + + M H C P++ T +L+ R
Sbjct: 249 DVN-TFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCR---------- 297
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
TR Y L G + + ++++ + +Y+ M GC D
Sbjct: 298 ----TRQADEAYAML---GRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPD 350
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+ L+ + G+C D + E G P+ + ++ +L ++ A A+++
Sbjct: 351 VHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLD 410
Query: 609 AMAYAPFHITERQWTELF 626
M+ F + + + +
Sbjct: 411 QMSAKGFSMNSQGYNGII 428
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 91/457 (19%), Positives = 168/457 (36%), Gaps = 64/457 (14%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ F + L + GR +AL + M PD Y +V L G + E L
Sbjct: 179 TTFTFGVAARALCRLGRARDALALLRGMARH-GCVPDAVLYQTVIHALVAQGGVAEAATL 237
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN-AVLNACVPSHQWKGVFWVFKQLRKSGL 345
++ M D+ +N VL C H + V + + G
Sbjct: 238 LDEMLLMGCAA---------------DVNTFNDVVLGLCGLGHVREAARLVDRMMMH-GC 281
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
PS TYG + C + A+ G++ E + N RG +
Sbjct: 282 TPSVVTYGFLLRGL--CRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLA----------- 328
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 464
G+ A + E + S + P T+ L+ G + + M++ C P
Sbjct: 329 ---EGKLARATELYEMMGS-KGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAP 384
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
NI T + +L + RN M+ A+ + ++ + + G++ + Y+ ++ A
Sbjct: 385 NIVTYSTLLHSFCRNGMWDDARAMLDQMS---AKGFSM----------NSQGYNGIIYAL 431
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
+ + + + M GC+ D + ++ + EH F +LLE G + +
Sbjct: 432 GKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANG 491
Query: 585 LFFTEMLIQAIVQSN-YEKAVALINAMAYAPFHITERQWTELF-----ESNEDRISRDKL 638
+ + LI A++ S +++ + L N M + + L E N DR S L
Sbjct: 492 ITYNT-LIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDR-SMMLL 549
Query: 639 EKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 675
E+++ N S + ++ LC++ K RD
Sbjct: 550 EEMMTKGIKPNNFSYNMLINE-------LCKAGKVRD 579
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 167/404 (41%), Gaps = 68/404 (16%)
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
G R + SR TKL+ IL G+PHEA IF+ ++ED + P + Y ++ L ++
Sbjct: 51 GKNSCRTVHSR---TKLMNILIGKGKPHEANLIFDNLVEDGH-RPTLITYTTLVAALTKL 106
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
+ + LI ++ + K PD ++YNA++NA S K +F
Sbjct: 107 KHFESIFLLISKVEENGMK---------------PDSILYNAMINAFSESGNVKEAMKIF 151
Query: 338 KQLRKSGLKPSAATYGLAMESYRRC------------------------LLKVLVRAFWE 373
++++ +G KP+ +T+ ++ Y +LVRA+
Sbjct: 152 QKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCS 211
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG---RWQDAMLVVEKIKSLRHSKP 430
+ I EA + M G+ Y LA G R +D +L ++ K + +
Sbjct: 212 KKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERT 271
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVY---SRNDMFSKAKE 487
I G +G I+ +++ + PN+ N+++K + + D +A
Sbjct: 272 CGIIVNGY---CKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALT 328
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
L EE +KPD T+S+++ A ++A + + ++ MA +G +
Sbjct: 329 LMEEYG----------------VKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEP 372
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
D + L RAG+ E S+ ++G P+ + T ++
Sbjct: 373 DIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTII 416
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/401 (18%), Positives = 149/401 (37%), Gaps = 88/401 (21%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ + G+ ++AM + +KD + + L+ G AG+P E L++ +LM
Sbjct: 134 MINAFSESGNVKEAMKIFQ---KMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMS 190
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D G V KP+ R
Sbjct: 191 LD-----------------GSV---------------KPNDR------------------ 200
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN ++ A + + V ++ SG++P TY +L RA+ ++G
Sbjct: 201 TYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTY------------NILARAYAQKG 248
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ A + M+ V + C G +A+ V ++K L P + F
Sbjct: 249 ETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKEL-GVHPNLVIF 307
Query: 436 TGLI-----ISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
LI I+ DG +D+ +++ + +P++ T + ++ +S + K +E+F
Sbjct: 308 NSLIKGFLDITDTDG--VDEALTLMEEY--GVKPDVITFSTIMNAWSSAGLMDKCQEIFN 363
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ +A ++PD + +S + + A + E E V MA SG + +
Sbjct: 364 DMAKAG-------------IEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVV 410
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
++ AGK + ++ + E G P+ F ++
Sbjct: 411 ICTTIISGWCSAGKMENAKMVYEKMCEIGISPNLKTFETLI 451
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 63/322 (19%), Positives = 123/322 (38%), Gaps = 47/322 (14%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ SE + K + M +G T L+KG G+ G + + +L + L
Sbjct: 134 MINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLH-LMSLD 192
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
R Y L+ EA + + M+ + PD+ Y+ +A Q G
Sbjct: 193 GSVKPNDR-TYNILVRAWCSKKNIEEAWNVLHKMVAS-GIQPDVVTYNILARAYAQKGET 250
Query: 281 KELVKLIERMRQK---PSKR----IKNMHRKNWDPV-------------LEPDLVVYNAV 320
LI M+ + P++R I N + K + + + P+LV++N++
Sbjct: 251 LRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSL 310
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR------RC------------ 362
+ + GV + + G+KP T+ M ++ +C
Sbjct: 311 IKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGI 370
Query: 363 -----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
+L + + G+ A + + +M + GV + + C+ G+ ++A +
Sbjct: 371 EPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKM 430
Query: 418 VVEKIKSLRHSKPLEITFTGLI 439
V EK+ + S L+ TF LI
Sbjct: 431 VYEKMCEIGISPNLK-TFETLI 451
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 113/509 (22%), Positives = 209/509 (41%), Gaps = 78/509 (15%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R +A A L+ L + T+ V R M Q G + LLKGL D+
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
++A+ +L + D D V YT ++ K G +A ++ ML D + P++
Sbjct: 179 QEALELLQMMP--DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML-DRGILPNVV 235
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQ---------------------KPSKRIKNMHRK 304
Y S+ L + + + ++++ M + +P + I + +
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY----- 359
+ D V EPD+V YN++++ + + +F + K GLKP TYG ++ Y
Sbjct: 296 HSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 360 ---RRCLLKVLVR---------------AFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
LL ++VR A+ ++GK+++A+ M Q+G+ Y
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 461
+ LC +GR +DAM E++ R S P I + LI S D + M D
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLS-PGNIVYNSLIHSLCIFDKWDKAKELILEMLDR 473
Query: 462 --CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
C I N+++ + + ++++LF+ R +KPD TYS+
Sbjct: 474 GICLDTI-FFNSIIDSHCKEGRVIESEKLFDLMVRIG-------------VKPDIITYST 519
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL--LEHA---FDS 574
+++ A + + + M G + D + L+ G C + +E A F
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI-----NGYCKISRMEDALVLFRE 574
Query: 575 LLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
+ +G P + + +++Q + Q+ A
Sbjct: 575 MESSGVSPDIITY-NIILQGLFQTRRTAA 602
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 165/423 (39%), Gaps = 63/423 (14%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L + + K + + M ++G+M ++ G G ++A+ L ++
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D+ Y L+ L K GR EA ++F+ M + L P+I Y ++ G L
Sbjct: 300 VEPDV---VTYNSLMDYLCKNGRCTEARKMFDSMTKR-GLKPEITTYGTLLQGYATKGAL 355
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E+ L++ M ++N + P+ V++ ++ A + VF ++
Sbjct: 356 VEMHGLLDLM-------VRNG--------IHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 341 RKSGLKPSAATYGL-------------AMESYRRCL----------LKVLVRAFWEEGKI 377
R+ GL P TYG AM + + + L+ + K
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR---HSKPLEIT 434
++A + M RG+ + + C GR ++ EK+ L KP IT
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES----EKLFDLMVRIGVKPDIIT 516
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
++ LI G +D+ + M +P+ T N ++ Y + A LF E
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM- 575
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
SSG + PD TY+ +L+ + + +Y G+ SG QL+ + +
Sbjct: 576 --ESSG----------VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 554 WLL 556
+L
Sbjct: 624 IIL 626
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 188/457 (41%), Gaps = 67/457 (14%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R +A A L+ L + T+ V R M Q G + LLKGL D+
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
++A+ +L + D D V YT ++ K G +A ++ ML D + P++
Sbjct: 179 QEALELLQMMP--DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML-DRGILPNVV 235
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQ---------------------KPSKRIKNMHRK 304
Y S+ L + + + ++++ M + +P + I + +
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY----- 359
+ D V EPD+V YN++++ + + +F + K GLKP TYG ++ Y
Sbjct: 296 HSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 360 ---RRCLLKVLVR---------------AFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
LL ++VR A+ ++GK+++A+ M Q+G+ Y
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 461
+ LC +GR +DAM E++ R S P I + LI S D + M D
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLS-PGNIVYNSLIHSLCIFDKWDKAKELILEMLDR 473
Query: 462 --CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
C I N+++ + + ++++LF+ R +KPD TYS+
Sbjct: 474 GICLDTI-FFNSIIDSHCKEGRVIESEKLFDLMVRIG-------------VKPDIITYST 519
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+++ A + + + M G + D + L+
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 165/423 (39%), Gaps = 63/423 (14%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L + + K + + M ++G+M ++ G G ++A+ L ++
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D+ Y L+ L K GR EA ++F+ M + L P+I Y ++ G L
Sbjct: 300 VEPDV---VTYNSLMDYLCKNGRCTEARKMFDSMTKR-GLKPEITTYGTLLQGYATKGAL 355
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E+ L++ M ++N + P+ V++ ++ A + VF ++
Sbjct: 356 VEMHGLLDLM-------VRNG--------IHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 341 RKSGLKPSAATYGL-------------AMESYRRCL----------LKVLVRAFWEEGKI 377
R+ GL P TYG AM + + + L+ + K
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR---HSKPLEIT 434
++A + M RG+ + + C GR ++ EK+ L KP IT
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES----EKLFDLMVRIGVKPDIIT 516
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
++ LI G +D+ + M +P+ T N ++ Y + A LF E
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM- 575
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
SSG + PD TY+ +L+ + + +Y G+ SG QL+ + +
Sbjct: 576 --ESSG----------VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 554 WLL 556
+L
Sbjct: 624 IIL 626
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/283 (17%), Positives = 107/283 (37%), Gaps = 29/283 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG--LKPSAATYGLAMESYRRCLLKVLVR 369
P++ YN +L ++ + + + + G P +Y ++
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSY------------TTVIN 207
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
F++EG +++A M RG++ Y + LC AM V+ +
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK-NGVM 266
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+ ++ G + I + M D EP++ T N+++ +N ++A+++
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F+ T+ LKP+ TY ++L+ AT + M +G +
Sbjct: 327 FDSMTKRG-------------LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ ++ GK F + + G P + + ++
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416
>gi|242054883|ref|XP_002456587.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
gi|241928562|gb|EES01707.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
Length = 655
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 153/356 (42%), Gaps = 45/356 (12%)
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
L + + + PD +Y ++ L + G L + + M D + P
Sbjct: 144 LEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPLME---------------DDAVAP 188
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-LLKVLVRAF 371
DL++++ +++ + +F +LR +G++P Y A+ +Y + L++ R
Sbjct: 189 DLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLIRDAKRLL 248
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ +M GV A Y + L GR A+ + ++++ KP
Sbjct: 249 ------------LHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKP- 295
Query: 432 EITFTGLIISSMDGGHID---DCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
+++ +I+++ G +D + +F M+ P++ T N ML+VY +F +A
Sbjct: 296 DLSVFNIILNAY--GQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVH 353
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
LF+ R+ S G G G+ +KP+ TY++M+ + + E + + M G Q
Sbjct: 354 LFD-LMRSASDGN---GGAGSSVKPNVVTYNTMIAIYGKSLEDEKAGKLVQDMQAIGVQP 409
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
D ++ +L +AGK F+ L EAG P+ + M++ YE+A
Sbjct: 410 DAITYSTILSIWVKAGKLDRAAKLFEKLREAGTEIDPVLYQTMVVA------YERA 459
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 136/354 (38%), Gaps = 62/354 (17%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ +LA L + GR A+ +F+ M + PD++ ++ + GQ+ L +E +L
Sbjct: 263 TYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIILNAYGQLDLAREADRLFWS 322
Query: 290 MRQ---KPSKRIKN-MHRKNWDPVL-------------------------EPDLVVYNAV 320
MR+ PS N M R D L +P++V YN +
Sbjct: 323 MRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSASDGNGGAGSSVKPNVVTYNTM 382
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA 380
+ S + + + + ++ G++P A TY +L + V+A GK++ A
Sbjct: 383 IAIYGKSLEDEKAGKLVQDMQAIGVQPDAITYS--------TILSIWVKA----GKLDRA 430
Query: 381 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK-PLEITFTGLI 439
+ + G +Y + ++ A LV + + LR K P I I
Sbjct: 431 AKLFEKLREAGTEIDPVLYQTMVVA------YERAGLVSQAKRLLRDLKDPEGIPKETAI 484
Query: 440 ISSMDGGHIDDCISIFQHMKDHCEPNIGTVN-AMLKVYSRNDMFSKAKELFEETTRANSS 498
G +++ +F+ + E +V+ AM+ +Y++N E+F+E +
Sbjct: 485 KILASAGRLEEAAWLFRRAANTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQ- 543
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
PD T ++ + A ++ +Y+ M GC H
Sbjct: 544 ------------LPDSETIATAMNAYGKLKDFDKAAALYQAMREEGCVFSDRVH 585
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 149/395 (37%), Gaps = 89/395 (22%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ L Y ++A L KA +A+ + N M+++ + PD Y+S+ G
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYNSILHGYCSSGQP 282
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
KE + +++MR +EPD+V Y+ +++ + + +F +
Sbjct: 283 KEAIGFLKKMRSDG---------------VEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 341 RKSGLKPSAATYGLAMESY--------RRCLLKVLVR---------------AFWEEGKI 377
K GLKP TYG ++ Y LL ++VR A+ +GK+
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKV 387
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
++A+ M Q+G+ A Y + LC +GR +DAML E++ S P I +
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS-PGNIVYNS 446
Query: 438 ----------------LIISSMDGGHIDDCISIFQHMKDHC------------------- 462
LI+ +D G + I + HC
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 463 -EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
+PN+ T N ++ Y +A +L LKP+ TYS+++
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG-------------LKPNTVTYSTLI 553
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ E ++K M SG D + +L
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 92/455 (20%), Positives = 168/455 (36%), Gaps = 83/455 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL AM ++ + + + + + F Y LL L R EAL + ++M
Sbjct: 128 LLKGLCADKRTSDAMDIV--LRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMA 185
Query: 256 ED--CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
+D PD+ +Y +V G KE S + + + + D + PD
Sbjct: 186 DDRGGGSPPDVVSYTTVIN-----GFFKE----------GDSDKAYSTYHEMLDRGILPD 230
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
+V YN+++ A + V + K+G+ P TY ++ +
Sbjct: 231 VVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY------------NSILHGYCS 278
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
G+ EA+ ++ M GV Y L LC NGR +A + + + R KP EI
Sbjct: 279 SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK-RGLKP-EI 336
Query: 434 T------------------------------------FTGLIISSMDGGHIDDCISIFQH 457
T F+ LI + + G +D + +F
Sbjct: 337 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSK 396
Query: 458 MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
M+ PN T A++ + ++ A FE+ L P
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG-------------LSPGNIV 443
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
Y+S++ T ++WE E + M G L+ ++ + G+ E F+ ++
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503
Query: 577 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
G P+ + + ++ + ++A+ L++ M
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 95/467 (20%), Positives = 182/467 (38%), Gaps = 98/467 (20%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D L + + K M + GL LL+G KG+ + +LD +
Sbjct: 306 LLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 365
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
D +V++ L+ G+ +A+ +F+ M + L P+ Y +V L + G
Sbjct: 366 GIHPD---HYVFSILICAYANQGKVDQAMLVFSKMRQQ-GLNPNAVTYGAVIGILCKSGR 421
Query: 280 LKELVKLIERMRQK---PSKRIKN--MHR----KNWD-------PVLEPDLVVYNAVLNA 323
+++ + E+M + P + N +H W+ +L+ + + N+
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 324 CVPSHQWKGVFW----VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
+ SH +G +F+ + + G+KP+ TY L+ + GK++E
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITY------------NTLINGYCLAGKMDE 529
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL---EITFT 436
A+ + M G+ Y L C R +DA+++ ++++S S + I
Sbjct: 530 AMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589
Query: 437 GLIIS-------------SMDGGHI------------------DDCISIFQHMKDHCEPN 465
GL + + G I DD + +FQ++ C +
Sbjct: 590 GLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL---CLMD 646
Query: 466 IG--------TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
+ ++A+LKV RND +AK+LF S +G L P+ +TY
Sbjct: 647 LKLEARTFNIMIDALLKV-GRND---EAKDLF-----------VAFSSNG--LVPNYWTY 689
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
M E E + ++ M +GC +D +++ E + G+
Sbjct: 690 RLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGE 736
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 154/378 (40%), Gaps = 49/378 (12%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
+S F Y ++ L K G A +F M ++ PDI Y+S+ G++GLL E +
Sbjct: 253 RSVFTYNIMIDYLCKEGDLEMARSLFTQM-KEAGFTPDIVTYNSLIDGHGKLGLLDECIC 311
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ E+M+ D +PD++ YNA++N + F +++ +GL
Sbjct: 312 IFEQMK---------------DADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL 356
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
KP+ TY + AF +EG + EA+ +M + + Y L
Sbjct: 357 KPNVVTY------------STFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA 404
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHMKD-HCE 463
C G +A+ +VE+I L+ L +T+T L+ + G + + +F+ M +
Sbjct: 405 NCKAGNLAEALKLVEEI--LQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVA 462
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
PN T A++ + + AK++ +E +KPD Y ++L
Sbjct: 463 PNQETYTALVHGFIKAKEMEYAKDILKEMKE-------------KCIKPDLLLYGTILWG 509
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC----HLLEHAFDSLLEAG 579
+ E + + + SG + + L+ ++G+ LLE D L A
Sbjct: 510 LCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIAT 569
Query: 580 EIPHPLFFTEMLIQAIVQ 597
E+ + + +VQ
Sbjct: 570 EVTYCALIDGLCKSGLVQ 587
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/452 (18%), Positives = 182/452 (40%), Gaps = 46/452 (10%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L++ + E K ++F+ M +GL + +G ++A+ + ++
Sbjct: 331 LINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIK---FFVDMR 387
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ F YT L+ KAG EAL++ +L+ + L V
Sbjct: 388 RVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQ-------------AGIKLNVVTYT 434
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
L L E R K ++ + R + + P+ Y A+++ + + + + + K++
Sbjct: 435 ALLDGLCEEGRMKEAEEV---FRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM 491
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
++ +KP YG ++ E ++ EA + +++ G+ A +Y
Sbjct: 492 KEKCIKPDLLLYG------------TILWGLCNESRLEEAKLLIGEIKESGINTNAVIYT 539
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 460
L +G+ +A+ ++E++ L E+T+ LI G + + + F M +
Sbjct: 540 TLMDAYFKSGQATEALTLLEEMLDLGLIAT-EVTYCALIDGLCKSGLVQEAMHHFGRMSE 598
Query: 461 -HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
+PN+ A++ +N+ F AK+LF+E + PD+ Y++
Sbjct: 599 IGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKG-------------MMPDKIAYTA 645
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 579
+++ + + + M G +LD + L+ S +G+ + D ++ G
Sbjct: 646 LIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKG 705
Query: 580 EIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+P + + ++ + ++A+ L N MA
Sbjct: 706 VLPDEVVYMCLIKKYYALGKVDEALELQNEMA 737
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/422 (19%), Positives = 173/422 (40%), Gaps = 43/422 (10%)
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+R+K ++ ++ + + + PD + Y+ ++N + ++ + + ++ K G+ P
Sbjct: 143 VRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHN 202
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
A Y +++ + G+++ A+ R+M QR + Y L LC +
Sbjct: 203 AVY------------NTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKS 249
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGT 468
R DA L++E + P +T+ LI G++D+ + +F Q +++ C P++ T
Sbjct: 250 ARISDASLILEDMIE-AGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 308
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTR----ANSSGYTFL------SG---DGAPL----- 510
N ++ Y + + +L +E + N Y L SG D L
Sbjct: 309 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 368
Query: 511 ----KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
KP +T++ M++ Q + +++ M GC D + ++ A RA +
Sbjct: 369 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 428
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 626
+ + EAG P + + ++ S ++A + + + + + L
Sbjct: 429 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 488
Query: 627 ESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQA 686
+ D EKLL + +A + + L +H C++++ L S F S+
Sbjct: 489 DGLCKSRRLDDAEKLLREMERNGSAPDVVAYTIL---IHGFCKADQ---LDKSLAFFSEM 542
Query: 687 ID 688
+D
Sbjct: 543 LD 544
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 173/450 (38%), Gaps = 59/450 (13%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D ++E K ++ M + G L+ L G + A ++ +
Sbjct: 311 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML-- 368
Query: 220 KDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+RD K S F + ++ + K G+ A +F LM D PDI Y+ + +
Sbjct: 369 --RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM-TDRGCLPDIYTYNIMISGACRAN 425
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ + +L+ERM + PD+V YN++++ + Q + V++
Sbjct: 426 RIDDARQLLERMTEAGCP---------------PDVVTYNSIVSGLCKASQVDEAYEVYE 470
Query: 339 QLRKSGLKPSAATYGLAMESY---RRC-----LLK---------------VLVRAFWEEG 375
LR G T ++ RR LL+ +L+ F +
Sbjct: 471 VLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKAD 530
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
++++++A M +G V T Y + LC + R +D ++++ + R P I +
Sbjct: 531 QLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLE-RGVTPDAIVY 589
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
T +I D+ +++ MK C P + T N ++ + +A L E
Sbjct: 590 TSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLE---- 645
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
+ DG PD TY+S+ + + + + +++ M GC ++
Sbjct: 646 -------VMESDGC--LPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSL 696
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
LL + K ++ LEAG P
Sbjct: 697 LLTKLVAEEKMDQAMEIWEEALEAGADVDP 726
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/481 (18%), Positives = 190/481 (39%), Gaps = 81/481 (16%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-----SRF 229
++ + M + G++ ++KGL D G A L RD++ S
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSA---------LVHYRDMQRNCAPSVI 237
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT L+ L K+ R +A I M+E P++ Y+++ ++G + E V L +
Sbjct: 238 TYTILVDALCKSARISDASLILEDMIEA-GCAPNVVTYNTLINGFCKLGNMDEAVVLFNQ 296
Query: 290 M---------------------RQKP---SKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
M +++P +K ++ M + EP+ + YN ++++ V
Sbjct: 297 MLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC----EPNFITYNTLMDSLV 352
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
S ++ F + + + + KPS T+ L ++ F + G+++ A +
Sbjct: 353 KSGKYIDAFNLAQMMLRRDCKPSHFTFNL------------MIDMFCKVGQLDLAYELFQ 400
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M RG + Y + C R DA ++E++ P +T+ ++
Sbjct: 401 LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTE-AGCPPDVVTYNSIVSGLCKA 459
Query: 446 GHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+D+ +++ +++ ++ T + ++ ++ A++L E R S+
Sbjct: 460 SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSA------ 513
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
PD Y+ ++ A Q + + M GC ++ ++ + ++ +
Sbjct: 514 -------PDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSAR 566
Query: 565 ----CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHI 617
C LL+ ++LE G P + +T ++ +Y++A L M AP +
Sbjct: 567 VRDGCMLLK----TMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVV 622
Query: 618 T 618
T
Sbjct: 623 T 623
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 104/248 (41%), Gaps = 28/248 (11%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N +L+A V + + + +FK R P + TY L+ F +
Sbjct: 136 NCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITY------------STLINGFCKARDF 183
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+A + ME+RG+V +VY + LC+NGR A++ ++ R+ P IT+T
Sbjct: 184 QQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ--RNCAPSVITYTI 241
Query: 438 LIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
L+ + I D I + M + C PN+ T N ++ + + +A LF + +
Sbjct: 242 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 301
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
S PD +TY+ +++ + + + + M GC+ + + L+
Sbjct: 302 CS-------------PDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLM 348
Query: 557 VEASRAGK 564
++GK
Sbjct: 349 DSLVKSGK 356
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 172/406 (42%), Gaps = 59/406 (14%)
Query: 232 TKLL-AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
TKL+ A++GK G+PHEA +F+ + E+ + P + Y ++ L
Sbjct: 64 TKLMNALIGK-GKPHEAQAVFHNLTEEGH-KPTLITYTTLVAAL---------------T 106
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
RQK K I + K D ++PD ++ NA++NA S + +F+++++ G KP+ +
Sbjct: 107 RQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTS 166
Query: 351 TY-------GLAMESYRRCLL-----------------KVLVRAFWEEGKINEAVAAVRN 386
TY G+ Y L +L++A+ + K+ EA +
Sbjct: 167 TYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHK 226
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS-MDG 445
M G+ Y +A NG + A ++ K++ KP E T G+IIS
Sbjct: 227 MVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQ-YNKVKPNERT-CGIIISGYCKE 284
Query: 446 GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G++ + + MK+ PN N+++K Y L T T +
Sbjct: 285 GNMTEALRFLYRMKELGVHPNPVVFNSLIKGY-----------LDATDTNGVDEALTLME 333
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
G +KPD T+S+++ A ++A + E ++ M +G + D ++ L RAG+
Sbjct: 334 EFG--IKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQ 391
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
E S+ + G + + FT ++ ++A +L M
Sbjct: 392 PRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKM 437
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 131/306 (42%), Gaps = 44/306 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
++ D G +AM + + YG K + Y L+ G GRP+E++++ +
Sbjct: 136 MINAFSDSGKVDEAMKIFQKMKEYGCK-----PTTSTYNTLIKGFGIVGRPYESMKLLEM 190
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M +D N+ P+ Y+ + L+E ++ +M ++PD
Sbjct: 191 MGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASG---------------IQPD 235
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
+V YN + A + + + + +++ + +KP+ T G +++ + +
Sbjct: 236 VVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTCG------------IIISGYCK 283
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN----NGRWQDAMLVVEKIKSLRHSK 429
EG + EA+ + M++ GV V+ L + NG +A+ ++E+ K
Sbjct: 284 EGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNG-VDEALTLMEEF----GIK 338
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P +TF+ ++ + G +D+C IF M K EP+I + + K Y R KA+ L
Sbjct: 339 PDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESL 398
Query: 489 FEETTR 494
++
Sbjct: 399 LTSMSK 404
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 59/326 (18%), Positives = 130/326 (39%), Gaps = 49/326 (15%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
+ +++ S+ + K + M + G T L+KG G G ++M +L+ +
Sbjct: 133 LNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMG 192
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+D+ + Y L+ + EA + + M+ + PD+ Y+++A Q
Sbjct: 193 --QDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVAS-GIQPDVVTYNTMARAYAQN 249
Query: 278 GLLKELVKLIERM---RQKPSKR------------------IKNMHRKNWDPVLEPDLVV 316
G ++ +LI +M + KP++R ++ ++R + + P+ VV
Sbjct: 250 GETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMK-ELGVHPNPVV 308
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL------------ 364
+N+++ + + GV + + G+KP T+ M ++ L
Sbjct: 309 FNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMV 368
Query: 365 -----------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
+L + + G+ +A + + +M + GV ++ + C G+
Sbjct: 369 KAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMD 428
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLI 439
A + EK+ + S L+ T+ LI
Sbjct: 429 RAFSLCEKMHEMGTSPNLK-TYETLI 453
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 110/510 (21%), Positives = 196/510 (38%), Gaps = 78/510 (15%)
Query: 96 LASESKEFAGDNLKRENLRELKEMFEKDLNW-------VLDDDVQLGSDYFAKNVEWHPE 148
LA S F G R R +E E + W +L QLG A ++ E
Sbjct: 223 LARLSNSFDG---IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQME 279
Query: 149 KRWR-SEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDKG 204
R + + V+VD + E K K + + + GL +T ++ L G
Sbjct: 280 FRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVV 339
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI 264
Q + V+ K++R VYT L++ GK+G ++F+ M + PD
Sbjct: 340 EAEQVLRVM------KNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRK-KIVPDF 392
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
Y S+ L Q G + E KL M K L+PD V Y A+++
Sbjct: 393 VTYTSMIHGLCQAGKVVEARKLFSEMLSKG---------------LKPDEVTYTALIDGY 437
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAV 384
+ + K F + Q+ + GL P+ TY ++ +C G+++ A +
Sbjct: 438 CKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC------------GEVDIANELL 485
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
M ++G+ Y L LC G + A+ ++E++ L P IT+T ++ +
Sbjct: 486 HEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEM-DLAGFFPDTITYTTIMDAYCK 544
Query: 445 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
G + + + M D +P I T N ++ + + M + L + ++
Sbjct: 545 MGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIK-----------WM 593
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG---------------CQLD 548
G + P+ T++S+++ + +YKGM G C+
Sbjct: 594 LDKG--IMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKAR 651
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEA 578
K AW L + L +++SL++
Sbjct: 652 NMKEAWFLHKEMVEKGFSLTAASYNSLIKG 681
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 87/453 (19%), Positives = 168/453 (37%), Gaps = 77/453 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML--------EDCNLYPD---------------IA 265
V+ +L +AG EA ++F+ +L + CNL+
Sbjct: 182 LVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFR 241
Query: 266 AYHSVAVTLGQV--GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
Y V V V ++ L+ + ++++ S I+ R N PD+V Y+ +++
Sbjct: 242 EYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNV-----PDVVSYSVIVDG 296
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATY----------GLAMESYR------------- 360
Q V + ++L++ GLKP+ TY G +E+ +
Sbjct: 297 YCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPD 356
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
+ L+ F + G ++ M+++ +V Y + LC G+ +A +
Sbjct: 357 NVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFS 416
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 479
++ S + KP E+T+T LI G + + S+ M + PN+ T A++ +
Sbjct: 417 EMLS-KGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475
Query: 480 DMFSKAKELFEETT----RANSSGYTFLSG------------------DGAPLKPDEYTY 517
A EL E + + N Y L D A PD TY
Sbjct: 476 GEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITY 535
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+++++A + + + M G Q L+ +G E +L+
Sbjct: 536 TTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLD 595
Query: 578 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
G +P+ F ++ Q +++N + + M
Sbjct: 596 KGIMPNATTFNSLMKQYCIRNNMRATIEIYKGM 628
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/359 (19%), Positives = 140/359 (38%), Gaps = 30/359 (8%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
+ V YN +L+ + K + Q+ G P +Y V+V +
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYS------------VIVDGYC 298
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
+ ++ + + + ++++G+ Y + LC GR +A V+ +K+ R P
Sbjct: 299 QVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIF-PDN 357
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+ +T LI G++ +F MK P+ T +M+ + +A++LF E
Sbjct: 358 VVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSE 417
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
S G LKPDE TY+++++ A + + ++ M G +
Sbjct: 418 ML---SKG----------LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVT 464
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ L+ + G+ + + E G P+ + ++ N E+AV L+ M
Sbjct: 465 YTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMD 524
Query: 612 YAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRS 670
A F +T + ++ K +LL + + + +T + L ++ C S
Sbjct: 525 LAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVL---MNGFCMS 580
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 100/263 (38%), Gaps = 50/263 (19%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF----VYTKLL- 235
M++ GL L+ GL G+ QA+ +++ + DL F YT ++
Sbjct: 488 MSEKGLQPNVCTYNALINGLCKVGNIEQAVKLME-------EMDLAGFFPDTITYTTIMD 540
Query: 236 --AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
+G+ + HE LRI + D L P I ++ + G+L++ +LI+ M K
Sbjct: 541 AYCKMGEMAKAHELLRI----MLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDK 596
Query: 294 ---PSKRIKN------MHRKNWDPVLE-----------PDLVVYNAVLNACVPSHQWKGV 333
P+ N R N +E PD YN ++ + K
Sbjct: 597 GIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEA 656
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
+++ K++ + G +AA+Y L++ F++ K EA M G +
Sbjct: 657 WFLHKEMVEKGFSLTAASY------------NSLIKGFYKRKKFEEARKLFEEMRTHGFI 704
Query: 394 GTASVYYELACCLCNNGRWQDAM 416
+Y G W++ +
Sbjct: 705 AEKEIYDIFVDVNYEEGNWENTL 727
>gi|255582522|ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528289|gb|EEF30336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 478
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 192/488 (39%), Gaps = 73/488 (14%)
Query: 134 LGSDYFAKN--------VEWHPEKRWR------------------SEAEAIRVLVDRLSE 167
LGS F N + WHP K R SE LV R
Sbjct: 15 LGSSNFTNNFPQIHNPTLSWHPCKNLRQTHITCVSTRPRKKRFPISEESETEDLV-RYVL 73
Query: 168 REMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
R ++ VR +++ + L + LG + W Q + V W+ K + +
Sbjct: 74 RSFSSDKVPLVRTLDKYVRVVRTEHCFLLFEELGRRDKWLQCLEVFRWMQ--KQRWYIAD 131
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS-VAVTLGQVGLLKELVKL 286
VY+KL++++GK G+ A+ +F+ M + PD + Y++ + L K L+K
Sbjct: 132 SGVYSKLISVMGKKGQTRMAMWLFSEM-RNSGCRPDSSVYNALITAHLHSKDKAKALIKA 190
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +++K M R +P++V YN +L A + V +FK L +S +
Sbjct: 191 LGYF-----EKMKGMQR------CQPNVVTYNILLRAFAQARNVNQVNALFKDLDQSIVS 239
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P TY M++Y + G I E + + M+ + L +
Sbjct: 240 PDIYTYNGVMDAYGK------------NGMIREMESVLSRMKSNQCKPDIITFNLL---I 284
Query: 407 CNNGRWQDAMLVVEKIKSLRHSK--PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCE 463
+ G+ QD + + KSL HSK P TF +I + ++ S+ Q M K
Sbjct: 285 DSYGKKQDFDKMEQVFKSLLHSKERPTLPTFNSMITNYGKARQKENAESVLQKMTKMKYT 344
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
PN T +++ +Y D SKA+E+F++ + G +K T ++ML+
Sbjct: 345 PNFITYESLIMMYGFCDSVSKAREIFDDMIES-----------GKEVKVS--TLNAMLDV 391
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
+ ++ G D T + L ++A L++ + G IP+
Sbjct: 392 YCLNGLPMEADLLFDNARNVGLLPDSTTYKLLYKAYTKANMKKLVQKLLKHMDRDGIIPN 451
Query: 584 PLFFTEML 591
FF + L
Sbjct: 452 KRFFLDAL 459
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 153/365 (41%), Gaps = 57/365 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT ++ L K GR EA++I +M +D L PD+ Y++V + + G ++E +
Sbjct: 479 IYTTIVKGLVKEGRFEEAIKILGVM-KDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVE 537
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K L+P++ Y A ++ + + + F ++ SG+ P+
Sbjct: 538 MIAKG---------------LKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPND 582
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+ L+ + ++G +A A R M +GV+ + L L N
Sbjct: 583 V------------ICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKN 630
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE----PN 465
G+ Q+AM V ++ + P T+T LI + G D + F+ D C+ PN
Sbjct: 631 GKLQEAMGVFSELLD-KGLVPDVFTYTSLISNLCKEG---DLKAAFELHDDMCKKGINPN 686
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP---LKPDEYTYSSMLE 522
I T NA++ + +KA+ELF DG P L + TYS+++
Sbjct: 687 IVTYNALINGLCKLGEIAKARELF----------------DGIPEKGLARNSVTYSTIIA 730
Query: 523 ASA-TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
+A+ E F+ ++ GM L G D + L+ +AG F ++E G
Sbjct: 731 GYCKSANLTEAFQ-LFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIA 789
Query: 582 PHPLF 586
P F
Sbjct: 790 STPAF 794
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 148/377 (39%), Gaps = 59/377 (15%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D + T K + R M G++ L+ GL G ++AM V L
Sbjct: 588 LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSE---LL 644
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
DK + F YT L++ L K G A + + M + + P+I Y+++ L ++G
Sbjct: 645 DKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKK-GINPNIVTYNALINGLCKLG-- 701
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E+ K E P K L + V Y+ ++ S F +F +
Sbjct: 702 -EIAKARELFDGIPEKG------------LARNSVTYSTIIAGYCKSANLTEAFQLFHGM 748
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV-- 398
+ G+ P + Y C L+ + G +A++ M + G+ T +
Sbjct: 749 KLVGVPPDSFVY---------C---ALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNA 796
Query: 399 ----YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
+++L G+ +A +VE + H P +T+T LI G+I + +
Sbjct: 797 LIDGFFKL-------GKLIEAYQLVEDMVD-NHITPNHVTYTILIEYHCTVGNIKEAEQL 848
Query: 455 FQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 513
F M K + PN+ T ++L Y+R S+ LF+E +KPD
Sbjct: 849 FMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMV-------------ARGIKPD 895
Query: 514 EYTYSSMLEASATAHQW 530
+ +S M++A W
Sbjct: 896 DLAWSVMVDAHLKEGNW 912
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 88/474 (18%), Positives = 159/474 (33%), Gaps = 118/474 (24%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ YT L+ + G+ E + +E+ P++ Y V L + G + E ++L
Sbjct: 233 YTYTNLINAYCRVGKVEEGKHVL-FDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKR 291
Query: 289 RM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M RQK S K+M + + L+PD V Y A++N V
Sbjct: 292 SMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQS 351
Query: 329 QWKGVFWV-----------------------------------FKQLRKSGLKPSAATYG 353
G F V F ++ G+KP TY
Sbjct: 352 DIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYN 411
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
+E Y ++ + +A + +++ + A + + LC+ G
Sbjct: 412 CLIEGY------------YKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLT 459
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAM 472
A + +++ S KP + +T ++ + G ++ I I MKD P++ N +
Sbjct: 460 RANELFQEMISW-GLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTV 518
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
+ + + + K E LKP+ YTY + + A + +
Sbjct: 519 IIGFCKAGKMEEGKSYLVEMI-------------AKGLKPNVYTYGAFIHGYCRAGEMQA 565
Query: 533 FEYVYKGMALSG-----------------------------CQLDQT------KHAWLLV 557
E + M SG C LDQ H+ L+
Sbjct: 566 AERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIH 625
Query: 558 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
S+ GK F LL+ G +P +T ++ + + + A L + M
Sbjct: 626 GLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMC 679
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 99/254 (38%), Gaps = 43/254 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
FVY L+ KAG +AL +F M+E+ A++++ ++G L E +L+E
Sbjct: 758 FVYCALIDGCCKAGNTEKALSLFLGMVEEG--IASTPAFNALIDGFFKLGKLIEAYQLVE 815
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M D + P+ V Y ++ K +F +++K + P+
Sbjct: 816 DM---------------VDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPN 860
Query: 349 AATYGLAMESYRRCLLK-----------------------VLVRAFWEEGKINEAVAAVR 385
TY + Y R + V+V A +EG +A+ V
Sbjct: 861 VLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVD 920
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD- 444
+M GV ++Y L LC + + + V+++++ + L + G ++
Sbjct: 921 DMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVE--KQGSKLSLATCGTLVCCFHR 978
Query: 445 GGHIDDCISIFQHM 458
G D+ + + + M
Sbjct: 979 AGRTDEALRVLESM 992
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 189/463 (40%), Gaps = 85/463 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY-GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
L+K G G + + WV+ G+K+ S F Y LL L + A R+ +M
Sbjct: 138 LIKSFGSLGMVEELL----WVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVM 193
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E+ + PD+ Y+++ QVG QK ++ ++M +N + PD
Sbjct: 194 -ENGKIGPDVVTYNTMIKGYCQVG-----------KTQKAFEKFRDMELRN----VAPDK 237
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+ Y ++ AC + ++ ++ ++GL+ Y L ++ +E
Sbjct: 238 ITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSL------------VIGGLCKE 285
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
GK E A M Q+G ++Y L G +AML+ E++K +P +T
Sbjct: 286 GKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKK-EGLEPDVVT 344
Query: 435 FTGLIISSM-DGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYS-------RNDMFSKAK 486
+ G++++ M G +D+ + + C N VNAML YS + +A+
Sbjct: 345 Y-GVVVNCMCKSGRLDEAMEYLE----FCRVNGVAVNAML--YSSLIDGLGKAGRVHEAE 397
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
+LFEE + G P PD Y Y+++++A A + + +K M GC
Sbjct: 398 KLFEEMVK-----------KGCP--PDSYCYNALIDALAKCGKTDEALAFFKRMEDEGC- 443
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
DQT + + ++ + + H E A D +++ G P F + I + +A
Sbjct: 444 -DQTVYTYTIM-INGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARA 501
Query: 604 VALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALC 646
L++ + AP + I E +LN LC
Sbjct: 502 CKLLDEL--APMGV---------------IPETAFEDMLNVLC 527
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 29/186 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y+ L+ LGKAGR HEA ++F M++ PD Y+++ L + G E + +R
Sbjct: 379 LYSSLIDGLGKAGRVHEAEKLFEEMVKK-GCPPDSYCYNALIDALAKCGKTDEALAFFKR 437
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M D + + Y ++N H+ + ++ + G+ P+A
Sbjct: 438 ME---------------DEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTA 482
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
A + + L GK+ A + + GV+ + + ++ LC
Sbjct: 483 AAF------------RALSIGLCLSGKVARACKLLDELAPMGVI-PETAFEDMLNVLCKA 529
Query: 410 GRWQDA 415
GR ++A
Sbjct: 530 GRIKEA 535
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 142/363 (39%), Gaps = 78/363 (21%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VY L+A L K G+ A + +MLE + PD+ Y S+ V Q L E KL+E+
Sbjct: 129 VYNCLIAGLCKMGKIDAARNVLKMMLER-SCVPDVITYTSLIVGCCQTNALDEARKLMEK 187
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M++ L PD V YNA+LN +Q + V + +++ ++G +P
Sbjct: 188 MKESG---------------LTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDT 232
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+Y N VA CLC +
Sbjct: 233 FSY-------------------------NTVVA----------------------CLCES 245
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 468
G++++A ++EK+ + P +T+ L+ +D+ + + M C P + T
Sbjct: 246 GKYEEAGKILEKMIE-KKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVIT 304
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
++ +SR D + A + E+ +A S PD TY+ +L+ A
Sbjct: 305 YTTLIGGFSRADRLADAYRVMEDMFKAGIS-------------PDLVTYNCLLDGLCKAG 351
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ E + + M C D ++ L+ + GK + +LE G P+ + F
Sbjct: 352 KLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFN 411
Query: 589 EML 591
M+
Sbjct: 412 TMI 414
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 117/556 (21%), Positives = 211/556 (37%), Gaps = 94/556 (16%)
Query: 116 LKEMFEKDL-------NWVLDDDVQLGSDYFAKNV-EWHPEKRWRSEAEAIRVLVDRLSE 167
L EM +KD N ++ ++G A+NV + E+ + L+ +
Sbjct: 115 LDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQ 174
Query: 168 REMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
+ K + M +SGL LL GL + + +L+ + + D
Sbjct: 175 TNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPD--- 231
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y ++A L ++G+ EA +I M+E PD+ Y+S+ +V + E +L+
Sbjct: 232 TFSYNTVVACLCESGKYEEAGKILEKMIEK-KCGPDVVTYNSLMDGFCKVSKMDEAERLL 290
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E M + P ++ Y ++ + + + V + + K+G+ P
Sbjct: 291 EDMVGRRCA---------------PTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISP 335
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
TY CLL L +A GK+ EA + M ++ Y L LC
Sbjct: 336 DLVTY--------NCLLDGLCKA----GKLEEAHELLEVMVEKDCAPDVVTYSILVNGLC 383
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI 466
G+ DA L++E + R +P +TF +I G +D+ + + MK+ C P++
Sbjct: 384 KLGKVDDARLLLEMMLE-RGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDV 442
Query: 467 GTVNAMLKVYSR----NDMFS-------------------------KAKELFEETTR--- 494
T + ++ Y + D F+ +A+E+ + T+
Sbjct: 443 VTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGC 502
Query: 495 -ANSSGYTFLSGDGAPLK------------------PDEYTYSSMLEASATAHQWEYFEY 535
SS Y + G ++ P+ YTYS ++ + E
Sbjct: 503 PPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAIN 562
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
V M GC D + L+ + K F ++ ++G P L + +LI
Sbjct: 563 VLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYN-ILISGF 621
Query: 596 VQS-NYEKAVALINAM 610
QS N EKA+ ++ M
Sbjct: 622 CQSGNVEKAIEVMQLM 637
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 113/289 (39%), Gaps = 45/289 (15%)
Query: 312 PDLVVYNAVLNA-C-------VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCL 363
PD++ +N +L A C SH ++G W P+A TY
Sbjct: 57 PDVITHNTILKAYCQIGDLDRALSH-FRGKMWC---------SPTAFTYC---------- 96
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
+L+ + +I+EA + M Q+ A+VY L LC G+ DA V K+
Sbjct: 97 --ILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKI-DAARNVLKMM 153
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMF 482
R P IT+T LI+ +D+ + + MK+ P+ NA+L + +
Sbjct: 154 LERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQL 213
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
+ +L EE A +PD ++Y++++ + ++E + + M
Sbjct: 214 EEVSKLLEEMVEAGR-------------EPDTFSYNTVVACLCESGKYEEAGKILEKMIE 260
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
C D + L+ + K E + ++ P + +T ++
Sbjct: 261 KKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLI 309
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 19/179 (10%)
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILG 239
+M + G T ++ GL D +A+ +L + ++ + + Y+ L+ L
Sbjct: 496 LMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQV---MSERGCEPNLYTYSILINGLC 552
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
K R +A+ + ++MLE PD+A Y S+ ++ + + + MR
Sbjct: 553 KTKRVEDAINVLDVMLEK-GCVPDVATYTSLIDGFCKINKMDAAYQCFKTMR-------- 603
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
D EPD + YN +++ S + V + + + G P AATY M S
Sbjct: 604 -------DSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRS 655
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 160/417 (38%), Gaps = 46/417 (11%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ D N+ ++ Y S+ +K LVK E ++ K ++ M +P D+
Sbjct: 1 MRDKNIAANVFTYSSI---------IKSLVK--EAKPEESYKVLEEMMAAGCNP----DV 45
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+N V+ S+ + V++ + +SG KP +Y +L+ +
Sbjct: 46 FAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSY------------HILIHGLAKI 93
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEI 433
GK++E++ + M RG + Y L L R A L E I+ H P +
Sbjct: 94 GKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHH--PDRL 151
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
F LI+ G + D F+ M H C+PN+ N +L + +A LF E
Sbjct: 152 MFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEM 211
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
+ S PD TY+++L+A A + E +++ M +G +
Sbjct: 212 KSHSCS-------------PDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITF 258
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 612
+ L+ R G+ F S+LEAG P+ +T ++ +A L M
Sbjct: 259 STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQ 318
Query: 613 APFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 669
A + L R S D+ EKL + A + T+ + + C+
Sbjct: 319 ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM--SGGAGLQPTIVTFNTLIDGFCK 373
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/423 (19%), Positives = 165/423 (39%), Gaps = 55/423 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G +++ +L + +++ Y+ L+ L KA R A +F+ M+
Sbjct: 86 LIHGLAKIGKLDESLKILSEMVMRGQTPSMQA---YSSLVRALAKARRVDHASSLFDEMI 142
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKN--MHRKNWDPVL 310
+ +PD ++ + + L Q G +K+ + ++M + +P+ + N +H L
Sbjct: 143 RGGH-HPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQL 201
Query: 311 E---------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
E PD+V YN +L+A + + + +F+ +R +G P+ T+
Sbjct: 202 EQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITF--- 258
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+ G++ +A+ +M + G Y L LC + A
Sbjct: 259 ---------STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQA 309
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC--EPNIGTVNAML 473
+ EK+ + P + + LI G +D+ +++ M +P I T N ++
Sbjct: 310 RELFEKM-TQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 368
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
+ + +A EL E L D TY ++ + A + +
Sbjct: 369 DGFCKLGKLGRANELVAEMGTKG-------------LAADSCTYRILIAGLSRATKLDEA 415
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF---TEM 590
VYK M LD + + G F++ ++G +P+P F +E
Sbjct: 416 LEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSES 475
Query: 591 LIQ 593
LI+
Sbjct: 476 LIK 478
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 173/431 (40%), Gaps = 47/431 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
V++D +R M + ++ M + G + ++ GL G +A+ + + + L
Sbjct: 85 VIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERL 144
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ +S + ++ L + + +A ++F+ M E ++ PD +Y + L + G
Sbjct: 145 GCTPNRRS---HNTIILGLCQQSKIDQACQVFHEM-EARDIPPDSWSYGILIDGLAKAGK 200
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L E KL RM D + P V YN V++ ++ +FK
Sbjct: 201 LNEAYKLFRRM---------------LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+R G +PS T+ +L+ A + GK++EA ++ M G V Y
Sbjct: 246 MRSKGCRPSRFTF------------NILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTY 293
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
L LC+ R DA ++E + R KP +T LI G I + + M
Sbjct: 294 STLISGLCSIARVDDARHLLEDMVK-RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV 352
Query: 460 DHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
+ P++ T N ++ + R +A+EL + L P+ TY+
Sbjct: 353 SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG-------------LAPNVVTYT 399
Query: 519 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 578
+++ A++ V+ M SGC + + L++ AG+ F ++ A
Sbjct: 400 ALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCA 459
Query: 579 GEIP-HPLFFT 588
G P H ++ T
Sbjct: 460 GISPDHVVYGT 470
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/416 (19%), Positives = 163/416 (39%), Gaps = 51/416 (12%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S Y ++ K G EA + M+ED ++ PD+ Y++V L + G ++E + L
Sbjct: 79 SPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHV-PDVVTYNTVMDGLCKSGRVEEALLL 137
Query: 287 ---IERMRQKPSKRIKNM------HRKNWDPVLE-----------PDLVVYNAVLNACVP 326
+ER+ P++R N + D + PD Y +++
Sbjct: 138 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAK 197
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRN 386
+ + + +F+++ SG+ PSA TY + + CL L +EA+ ++
Sbjct: 198 AGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGM--CLAYTL----------DEALELFKS 245
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
M +G + + L C G+ +A +++++ H P +T++ LI
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHV-PDVVTYSTLISGLCSIA 304
Query: 447 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
+DD + + M K C+P + T N ++ + +A+E+ + + S
Sbjct: 305 RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS------- 357
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
PD TY++++ A Q E + M G + + L+ +A +
Sbjct: 358 ------PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 411
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA---PFHIT 618
F + +G P+ +T +++ + + L M A P H+
Sbjct: 412 PEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVV 467
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/430 (19%), Positives = 163/430 (37%), Gaps = 69/430 (16%)
Query: 215 WVYG-----------LKDKRDL----------KSRFVYTKLLAILGKAGRPHEALRIF-N 252
W YG L D RDL S YT L+ L A +A +F +
Sbjct: 11 WSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFAD 70
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
+ C P Y+ + + G+L+E LI++M I++ H P
Sbjct: 71 MNRRGCP--PSPVTYNVIIDASCKRGMLEEACDLIKKM-------IEDGH--------VP 113
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
D+V YN V++ S + + +F ++ + G P+ ++ ++
Sbjct: 114 DVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSH------------NTIILGLC 161
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
++ KI++A ME R + + Y L L G+ +A + ++ P
Sbjct: 162 QQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLD-SGITPSA 220
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+T+ +I +D+ + +F+ M+ C P+ T N ++ + + K E F
Sbjct: 221 VTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKR---GKMDEAFRL 277
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
R G+ PD TYS+++ + + + ++ + M C+
Sbjct: 278 LKRMTDDGHV----------PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVT 327
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM- 610
L+ +AG+ D+++ +G+ P + + ++ E+A L++ M
Sbjct: 328 QNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMV 387
Query: 611 --AYAPFHIT 618
AP +T
Sbjct: 388 ARGLAPNVVT 397
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/347 (17%), Positives = 138/347 (39%), Gaps = 19/347 (5%)
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+L+ + GK+N+A + + GV + Y L LC + DA + +
Sbjct: 15 ILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR- 73
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 484
R P +T+ +I +S G +++ + + M +D P++ T N ++ ++ +
Sbjct: 74 RGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEE 133
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A LF E R + P+ ++++++ + + V+ M
Sbjct: 134 ALLLFNEMERLGCT-------------PNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
D + L+ ++AGK + F +L++G P + + ++ + ++A+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 605 ALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 664
L +M + + L +++ R D+ +LL + + +T S L L
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 665 HALCRSEKER----DLSSSAHFGSQAIDISPLHGIHEAFDVKETENV 707
++ R + R D+ + + +HG+ +A +KE V
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 78/403 (19%), Positives = 161/403 (39%), Gaps = 58/403 (14%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-----GLAMESY----- 359
+ PD Y +++ + + +F++L SG+ PS Y GL M +
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 360 --------RRC-----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
R C V++ A + G + EA ++ M + G V Y + L
Sbjct: 66 ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 465
C +GR ++A+L+ +++ L P + +I+ ID +F M+ P+
Sbjct: 126 CKSGRVEEALLLFNEMERL-GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPD 184
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ ++ ++ ++A +LF R SG T P TY+ ++
Sbjct: 185 SWSYGILIDGLAKAGKLNEAYKLFR---RMLDSGIT----------PSAVTYNVVIHGMC 231
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIP 582
A+ + ++K M GC+ + L+ + GK ++ AF + + G +P
Sbjct: 232 LAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK---MDEAFRLLKRMTDDGHVP 288
Query: 583 HPLFFTEMLIQAIVQSNYEKAVALINAMA---YAPFHITERQWTE-LFESNEDRISRDKL 638
+ ++ ++ + + A L+ M P +T+ L ++ + +R+
Sbjct: 289 DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEARE-- 346
Query: 639 EKLLNALCNCNAASSEITVSNLSRALHALCR---SEKERDLSS 678
+L+A+ + + +T + L +H CR +E+ R+L S
Sbjct: 347 --VLDAMVSSGQSPDVVTYNTL---VHGHCRAGQTERARELLS 384
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 96/258 (37%), Gaps = 44/258 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G ++A VLD + D+ Y L+ +AG+ A + + M+
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDV---VTYNTLVHGHCRAGQTERARELLSDMV 387
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
L P++ Y ++ L + L E + +M+ P+L
Sbjct: 388 AR-GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA---------------PNLF 431
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL-------------AMESYRRC 362
Y A++ + Q G +F ++ +G+ P YG A+E R
Sbjct: 432 TYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREG 491
Query: 363 ------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+ + V + GK+ A+ VR+M + G + L LC +G
Sbjct: 492 RESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSG 551
Query: 411 RWQDAMLVVEKIKSLRHS 428
+ +A V+E+I L +
Sbjct: 552 QGGEARAVLEEIMDLAYG 569
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 146/367 (39%), Gaps = 60/367 (16%)
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
++GL LI+ + + + + + + L+P+L++YN+V+NA +
Sbjct: 190 KMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAES 249
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRR-----------------------CLLKVLVRAFW 372
+ ++ KSG+KP TY + Y R L+
Sbjct: 250 IINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLC 309
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
G++NEA+ + M + GV+ T + LC+ GR +DA + +K + KP
Sbjct: 310 NSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKK-KGCKPNV 368
Query: 433 ITFTGLI----ISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
T+T LI +S M I +F M +D PN T NA++ V N A
Sbjct: 369 YTYTSLISGQRVSRM-------AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALI 421
Query: 488 LFEETTR----ANSSGYTFL------SGD-------------GAPLKPDEYTYSSMLEAS 524
+F + N+S Y L GD G P P TY+ +++
Sbjct: 422 VFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRP-TPTLVTYNIIIKGY 480
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
+ + V + M +GCQ D+ + L+ + K L F+ +++ G P+
Sbjct: 481 CDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNE 540
Query: 585 LFFTEML 591
+ +T ++
Sbjct: 541 VTYTALI 547
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 28/245 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ ++ L G AL +FN M++ L P++ Y S+ LGQ G ++E ++
Sbjct: 612 TYSTVINGLCNNGAIPLALEMFNKMVKHGCL-PNLHTYSSLIQALGQEGRVEEAEEMFSE 670
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
++++ L PD V Y ++ CV S + F ++ +G +P+
Sbjct: 671 LKKQG---------------LIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTL 715
Query: 350 ATYGLAMESYRR--------CLLKVLVRAFWEEGKINEAVAAV--RNMEQRGVVGTASVY 399
TY + ++ + L + +++ IN+ V +V + + + +Y
Sbjct: 716 QTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLY 775
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
L L +GRW +A + + S + P + T+ +IS + +D + +F+HM
Sbjct: 776 DALLSRLSRSGRWFEANNLYRSMVS-QSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMS 834
Query: 460 DH-CE 463
D CE
Sbjct: 835 DQRCE 839
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 69/369 (18%), Positives = 135/369 (36%), Gaps = 83/369 (22%)
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILG 239
+M + G + +L++G G +AMS+L + R + Y ++
Sbjct: 425 MMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLT---NMLKGRPTPTLVTYNIIIKGYC 481
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
+G A+R+ LM + PD +Y + ++ + EL
Sbjct: 482 DSGDTDVAIRVLELMKAN-GCQPDEWSYTELISGFCKISKM-ELAS-------------- 525
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
M + D L P+ V Y A+++ + + +++++SG +P+ TY
Sbjct: 526 GMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTY------- 578
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
VL+ ++ + A + M + + Y + LCNNG
Sbjct: 579 -----NVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNG--------- 624
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSR 478
+ PL + +F M H C PN+ T +++++ +
Sbjct: 625 --------AIPLA-------------------LEMFNKMVKHGCLPNLHTYSSLIQALGQ 657
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE-YFEYVY 537
+A+E+F E + L PDE TY M+E + + + F+++
Sbjct: 658 EGRVEEAEEMFSELKKQG-------------LIPDEVTYVKMIEVCVMSGKVDRAFDFLG 704
Query: 538 KGMALSGCQ 546
+ M +GCQ
Sbjct: 705 E-MINAGCQ 712
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 106/489 (21%), Positives = 183/489 (37%), Gaps = 59/489 (12%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
+LLKGL +AM VL + + + + YT LL L R EAL + ++M
Sbjct: 130 QLLKGLCHGKRVGEAMDVL--LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMM 187
Query: 255 LED----CNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWD 307
+D C P++ +Y V T GQV KP N+ + D
Sbjct: 188 ADDHGRRCP--PNVVSYSIVINGFFTEGQV--------------DKP----YNLFLEMID 227
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
+ PD+V Y V++ + + VF+Q+ +G KP+ TY L
Sbjct: 228 RGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTY------------NCL 275
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
+ + GK E V + M RG+ Y L LC NGR ++A + + +
Sbjct: 276 IHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIR-KG 334
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
KP T+ LI G + + S M ++ P+ N Y++ M KA
Sbjct: 335 IKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAM 394
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
++F + + L P+ Y ++++A + + E + M G
Sbjct: 395 DIFNKMRQHG-------------LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVT 441
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
+ L+ K E +L+ G P+ +FF ++ + L
Sbjct: 442 PNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRL 501
Query: 607 INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 666
I+ M + +T L D+ EK+ + + + + +E+T + L LH
Sbjct: 502 IDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTL---LHG 558
Query: 667 LCRSEKERD 675
C + + D
Sbjct: 559 YCSASRIDD 567
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/419 (20%), Positives = 168/419 (40%), Gaps = 52/419 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ G KG+ + S LD + GL ++ + K G +A+ IFN
Sbjct: 345 LIHGYATKGALSEMHSFLDLMVENGLS-----PDHHIFNIFFSAYAKCGMIDKAMDIFNK 399
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKEL-VKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
M + L P++ Y ++ L ++G + + VK + + + + P
Sbjct: 400 MRQH-GLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG----------------VTP 442
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
++VV+N+++ +W+ + ++ G+ P+A + L+
Sbjct: 443 NIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFF------------NTLICNLC 490
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
G++ E + ME GV A Y L C GR +A V + + S+ S P E
Sbjct: 491 NVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLS-PTE 549
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+T+ L+ IDD +F+ M + P + T N +L + FS+AKEL+
Sbjct: 550 VTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLN 609
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
+ + K D YTY+ +L ++ + +++ + G QL+
Sbjct: 610 MINSGT-------------KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIIT 656
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
++ + G+ F ++ G +P+ + + + I + + E+ +L +AM
Sbjct: 657 FTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAM 715
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 108/249 (43%), Gaps = 20/249 (8%)
Query: 341 RKSGLKPSAATYGLAMESYRR---CLLKVLVRAFWEEGKINEAV-AAVRNMEQRGVVGTA 396
R L+ A +GL +++ R + L++ ++ EA+ ++ M + G +
Sbjct: 102 RMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDT 161
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKS--LRHSKPLEITFTGLIISSMDGGHIDDCISI 454
Y L LCN R ++A+ ++ + R P ++++ +I G +D ++
Sbjct: 162 VSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNL 221
Query: 455 FQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 513
F M D P++ T ++ + +F +A+ +F++ +G+ KP+
Sbjct: 222 FLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMI---DNGF----------KPN 268
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
YTY+ ++ + +W+ + + M+ G + D + LL + G+C FD
Sbjct: 269 NYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFD 328
Query: 574 SLLEAGEIP 582
S++ G P
Sbjct: 329 SMIRKGIKP 337
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/558 (18%), Positives = 218/558 (39%), Gaps = 89/558 (15%)
Query: 128 LDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL 186
+D +V + +F +W ++R + ++ L+ L E M + WK ++ M +
Sbjct: 94 IDVEVSVKIQFF----KWAGKRRNFEHDSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSC 149
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
++ ++++ LG +A+SV Y +K ++ + Y ++ +L + G +
Sbjct: 150 AMAPAELSEIVRILGKAKMVNRALSVF---YQVKGRKCRPTASTYNSIILMLMQEGHHEK 206
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLG------------------------------- 275
++N M + + +PD Y ++
Sbjct: 207 VHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLM 266
Query: 276 ----QVGLLKELVKLIERMRQK-----------------PSKRIKN--MHRKNW-DPVLE 311
+VG ++E + L++ MR + S R+++ M KN +
Sbjct: 267 GIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCK 326
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+V+ N ++N S+ + +F +++ P+ TY ++S F
Sbjct: 327 PDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSL-----------F 375
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ ++EA + M++ G+V ++ Y L C R + A+L++E++ + P
Sbjct: 376 EAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDE-KGFPPC 434
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFE 490
+ LI + D +FQ +K++C + V A M+K + + ++A LF
Sbjct: 435 PAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFN 494
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E + + PD Y Y++++ A + + +++ M +GC D
Sbjct: 495 EMKKLGCT-------------PDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDIN 541
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
H +L +R G F + + P + F +L +E+A L+ M
Sbjct: 542 SHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEM 601
Query: 611 AYAPFHITERQWTELFES 628
+ F ++ + E+
Sbjct: 602 SSKGFQYDLITYSSILEA 619
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 170/394 (43%), Gaps = 79/394 (20%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
L V ++ +R L + F YT+L+ LGK+GR +A + ML+D PD+ +++
Sbjct: 279 LGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKD-GCKPDVVLMNNLIN 337
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ--W 330
LG+ L++ +KL + M ++ N P++V YN ++ + +
Sbjct: 338 ILGRSNHLRDAIKLFDEM------KLLN---------CAPNVVTYNTIIKSLFEAKAPLS 382
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
+ W F++++K G+ PS+ TY +L+ + + ++ +A+ + M+++
Sbjct: 383 EASSW-FERMKKDGIVPSSFTYS------------ILIDGYCKTNRVEKALLLLEEMDEK 429
Query: 391 GVVGTASVY------------YELA---------CCLCNNGRWQDAML--------VVEK 421
G + Y Y++A C C++ R M+ + E
Sbjct: 430 GFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEA 489
Query: 422 IKSLRHSKPLEIT-----FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 475
I K L T + L+ + +D+ S+F+ M+++ C P+I + N +L
Sbjct: 490 INLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNG 549
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
+R A E+F T NS+ +KPD +++++L + A +E
Sbjct: 550 LARTGGPKGALEMF--TKMKNST-----------IKPDVVSFNTILGCLSRAGLFEEAAK 596
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
+ + M+ G Q D ++ +L + C ++E
Sbjct: 597 LMQEMSSKGFQYDLITYSSILEAVGKVDDCKMVE 630
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 165/379 (43%), Gaps = 57/379 (15%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKL-LKGLGDKGSWRQAMSVLDWVYGL 219
++D L ++ T K + +R+M Q G+ + + + + G A S+L+ +
Sbjct: 184 VMDGLCKKGHTQKAFDLLRLMEQ-GITKPDTCIYNIVIDAFCKDGMLDGATSLLNE---M 239
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K K YT L+ LGK + E +R L + N+YPD+ ++SV L + G
Sbjct: 240 KQKNIPPDIITYTSLIDGLGKLSQ-WEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGK 298
Query: 280 LKELVKLIERMRQK---PSKRIKNM-------------HRKNWDPVL----EPDLVVYNA 319
+++ +++ M +K P++ N+ R+ +D ++ EPD++ Y A
Sbjct: 299 VEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTA 358
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES--------------------- 358
++N V + +F+++ ++GLKPS T + +
Sbjct: 359 LINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAG 418
Query: 359 -----YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
Y C L+ +++ G + EA++ +E+R +Y + LC NG+
Sbjct: 419 HIPNLYTHC---TLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLD 475
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAM 472
A EK+ L P IT+T +I G +D+ + + M+D+ C P+ T N +
Sbjct: 476 KAHATFEKL-PLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVI 534
Query: 473 LKVYSRNDMFSKAKELFEE 491
++ + R+ S+ K +E
Sbjct: 535 VRGFFRSSKVSEMKAFLKE 553
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 131/325 (40%), Gaps = 40/325 (12%)
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
K + R+N + EPD V+Y V++ C H K F + + + + KP
Sbjct: 166 KKLVREN---ICEPDEVMYGTVMDGLCKKGHTQKA-FDLLRLMEQGITKPDT-------- 213
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
C+ +++ AF ++G ++ A + + M+Q+ + Y L L +W+
Sbjct: 214 ----CIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRT 269
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 476
+ ++ L + P TF +I G ++D I +M + EPN T N ++ Y
Sbjct: 270 LFLEMIHL-NIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGY 328
Query: 477 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
+A+ +F+ ++PD +Y++++ + + +
Sbjct: 329 CLRGQMGRARRIFDSMIDKG-------------IEPDIISYTALINGYVEKKKMDKAMQL 375
Query: 537 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 596
++ ++ +G + + LL G+ + FD + AG IP+ + +
Sbjct: 376 FREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPN------LYTHCTL 429
Query: 597 QSNYEKAVALINAMAYAPFHITERQ 621
Y K + AM++ FH ER+
Sbjct: 430 LGGYFKNGLVEEAMSH--FHKLERR 452
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/301 (18%), Positives = 118/301 (39%), Gaps = 28/301 (9%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
D + V+N+C H+ F V K G+ + T+ L+R +
Sbjct: 106 DAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTF------------TTLIRGLF 153
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRHSKPL 431
E K+ +AV + + + + V Y LC G Q A ++ ++ +KP
Sbjct: 154 AENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLL-RLMEQGITKPD 212
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ +I + G +D S+ MK + P+I T +++ + + K + LF
Sbjct: 213 TCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFL 272
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E N + PD T++S+++ + E E + M G + ++
Sbjct: 273 EMIHLN-------------IYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEI 319
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ ++ G+ FDS+++ G P + +T ++ + + +KA+ L +
Sbjct: 320 TYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREI 379
Query: 611 A 611
+
Sbjct: 380 S 380
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 157/388 (40%), Gaps = 46/388 (11%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+R+ + +L K G+ + ++F ML++ + PD Y+ + + G + E +L
Sbjct: 7 NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDN-GISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
E M LEP + YN++LNA + K +FK + + G +
Sbjct: 66 YEEMVSVG---------------LEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFE 110
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACC 405
P TY ++ + GK+ EA+ + M +RG Y L
Sbjct: 111 PDVVTY------------STIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALING 158
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EP 464
LC + + A ++E++ S + P IT+ ++ G + + F M P
Sbjct: 159 LCKDENIERAYKLLEEMAS-KGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSP 217
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
++ N +L + +A +LF++ + GY PD TY+S+L
Sbjct: 218 DVVAYNGLLDALYKEGKTDEAMKLFKDVI---AKGYM----------PDTVTYNSILLGL 264
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
A + E ++K M SGC + ++ +L RA K + + + G +P
Sbjct: 265 ARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDV 324
Query: 585 LFFTEMLIQAIVQSN-YEKAVALINAMA 611
+ + +L+ + ++N +KA L + M
Sbjct: 325 VTYN-ILLDGLCKTNLVDKAHELFSTMV 351
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/420 (18%), Positives = 158/420 (37%), Gaps = 45/420 (10%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S + Y LL K + EA+ +F M E PD+ Y ++ L + G + E +++
Sbjct: 77 SIYTYNSLLNAFCKETKMKEAMELFKTMAEK-GFEPDVVTYSTIISGLCKTGKVTEALEM 135
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ K + + V YNA++N + + + +++ G
Sbjct: 136 --------------LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P TY ++ GK++EA +M RG Y L L
Sbjct: 182 PDNITY------------NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDAL 229
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 465
G+ +AM + + + + + P +T+ +++ ++D+ +F+ M C PN
Sbjct: 230 YKEGKTDEAMKLFKDVIA-KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPN 288
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
T + +L + R A ++ EE ++ + PD TY+ +L+
Sbjct: 289 GATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAV-------------PDVVTYNILLDGLC 335
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+ + ++ M +GC D ++ +L + K H FD ++E +P +
Sbjct: 336 KTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVV 395
Query: 586 FFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRISRDKLEKLL 642
F ++ ++A L++ M AP ++ I D+L + +
Sbjct: 396 TFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAM 455
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 67/372 (18%), Positives = 135/372 (36%), Gaps = 57/372 (15%)
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV------------------------- 392
S R +V++++F ++GK+ + M G+
Sbjct: 5 SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64
Query: 393 -------VG---TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 442
VG + Y L C + ++AM + K + + +P +T++ +I
Sbjct: 65 LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELF-KTMAEKGFEPDVVTYSTIISGL 123
Query: 443 MDGGHIDDCISIFQH--MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
G + + + + H ++ C N NA++ +++ +A +L EE S GY
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMA---SKGY 180
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
PD TY+++L + + + M G D + LL
Sbjct: 181 V----------PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALY 230
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 620
+ GK F ++ G +P + + +L+ +SN ++A + M +
Sbjct: 231 KEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGA 290
Query: 621 QWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRS---EKERDLS 677
++ + + D K+L + A +T + L L LC++ +K +L
Sbjct: 291 TYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNIL---LDGLCKTNLVDKAHELF 347
Query: 678 SSAHFGSQAIDI 689
S+ A DI
Sbjct: 348 STMVDNGCAPDI 359
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 153/407 (37%), Gaps = 54/407 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ L K GR EA+R+ M L D+ Y ++ G L L +
Sbjct: 46 FTYCILMDGLCKEGRVEEAMRLLGEMKRK-GLEVDVVVYSTLISGFCSKGCLDRGKALFD 104
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +K + P++VVY+ ++N W+ V + + G++P
Sbjct: 105 EMLEKG---------------ISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPD 149
Query: 349 AATY-----GLAMESYRRCLL------------------KVLVRAFWEEGKINEAVAAVR 385
TY GL + R L VL+ +EG I +A
Sbjct: 150 VYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFE 209
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMD 444
M ++G Y L LCNNG+ +AM L ++ + +P ITF +I
Sbjct: 210 TMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCK 269
Query: 445 GGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
G +D + I+ M + N+ T + ++ Y ++ + KA EL++ R + G
Sbjct: 270 EGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWK---RVHKLG---- 322
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
L P TYS M++ H + + ++ M +SG + L+ +
Sbjct: 323 ------LVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKES 376
Query: 564 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
F + E+ P + F M+ + + A L+N M
Sbjct: 377 SLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDM 423
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/419 (20%), Positives = 170/419 (40%), Gaps = 48/419 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G KG WR+A +VL + + ++ + YT ++ L K GR +AL +F+LM
Sbjct: 121 LINGFCKKGLWREATAVL---HTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMT 177
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E P Y+ + L + G + + K+ E M +K KR+ ++V
Sbjct: 178 EK-GEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEK-GKRL--------------EVV 221
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSG--LKPSAATYGLAMESYRRCLLKVLVRAFWE 373
YN ++ + + +F L + G ++P T+ +++ +
Sbjct: 222 SYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITF------------NTVIQGLCK 269
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
EG++++AV M +RG G + L +G AM + +++ L P
Sbjct: 270 EGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLV-PSST 328
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T++ +I ++ +F MK P + N ++ + +A+ LF+E
Sbjct: 329 TYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEM 388
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
+N +PD +++ M++ + A + + M G D +
Sbjct: 389 KESNC-------------EPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTY 435
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ + S+ G+ + AFDS++ +G P + ++ + E+ + L+ MA
Sbjct: 436 SSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMA 494
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 119/302 (39%), Gaps = 29/302 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+V YN ++N + + + ++ S +P++ TY + M+
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMD------------GL 55
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+EG++ EA+ + M+++G+ VY L C+ G + +++ + P
Sbjct: 56 CKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLE-KGISPN 114
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ ++ LI G + ++ M + +P++ T M+ ++ KA +LF+
Sbjct: 115 VVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFD 174
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
T +P TY+ ++ +++ M G +L+
Sbjct: 175 LMTEKGE-------------EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVV 221
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT-EMLIQAIV-QSNYEKAVALIN 608
+ L++ GK F SLLE G P T +IQ + + +KAV + +
Sbjct: 222 SYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYD 281
Query: 609 AM 610
M
Sbjct: 282 TM 283
Score = 39.3 bits (90), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 78/211 (36%), Gaps = 32/211 (15%)
Query: 210 MSVLDWVYGLKDKRDLK----SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
M +L++ GL + + + F Y L+A L K +A R+F M E N PD
Sbjct: 340 MHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKES-NCEPDTI 398
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
+++ + + G + +L+ M+Q L PD Y++ +N
Sbjct: 399 SFNIMIDGTLKAGDIHSAKELLNDMQQMG---------------LTPDAYTYSSFINRLS 443
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
Q + F + SG+ P Y L++ F +I E + +R
Sbjct: 444 KLGQMEEAKGAFDSMIASGITPDNHVY------------DSLIKGFGLNDEIEEVINLLR 491
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
M GV+ + + LCN+ M
Sbjct: 492 QMADMGVILDLEITNSILTFLCNSAEHLHVM 522
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 116/555 (20%), Positives = 217/555 (39%), Gaps = 77/555 (13%)
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWV---YGLKDKR--DLKSRFVYTKLLAILGKAGRP 244
E + LLKGL G+W +A + +WV +G ++ + D F ++ +LG+ +
Sbjct: 163 ESDITGLLKGLDLSGNWERAFLLFEWVWLNFGSENMKVDDQSVEF----MVKMLGRESQY 218
Query: 245 HEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKN 300
A ++F+++ +E+ +L D+ A +V + G K +++ E+M++ P+ N
Sbjct: 219 SIASKLFDIIPVEEYSL--DVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYN 276
Query: 301 M-------HRKNWDPVLEP-----------DLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
+ + W +LE D V++AC F L+
Sbjct: 277 VMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKL 336
Query: 343 SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
+G KP ATY +++ F + G EA+ ++ ME A Y EL
Sbjct: 337 NGYKPGTATY------------NSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNEL 384
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-H 461
G + V++ + S + P IT+T +I + G D + +F MK+
Sbjct: 385 VAAYVRAGFHDEGAAVIDTMAS-KGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELG 443
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
C PN+ T N +L + + S+++++ + + +G P PD T+++ML
Sbjct: 444 CVPNVCTYNNVLVLLGKR---SRSEDMIKILCD--------MKLNGCP--PDRITWNTML 490
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
+ ++ V + M G + D+ L+ R G + + ++ AG
Sbjct: 491 AVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFT 550
Query: 582 PHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEK- 640
P + +L + N++ A +++ M F E ++ L + LEK
Sbjct: 551 PCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKV 610
Query: 641 --------------LLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQA 686
LL L N ++ + RA H L + + D+ S
Sbjct: 611 EMEIYDGHVFPSWMLLRTLVLTNYKCRQL--KGMERAFHQLQNNGYKLDMVVINSMLSMF 668
Query: 687 IDISPLHGIHEAFDV 701
+ L HE DV
Sbjct: 669 VRNQKLEKAHEMLDV 683
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 175/427 (40%), Gaps = 60/427 (14%)
Query: 181 MNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
M ++GL + T ML + +G +W + +LD ++ K F T +++
Sbjct: 263 MKETGLDPTLVTYNVMLDVYGKMGR--AWSMILELLDE---MRSKGLEFDEFTCTTVISA 317
Query: 238 LGKAGRPHEALRIFNLMLEDCNLY-PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
G+ G EA R F+ + N Y P A Y+S+ G+ G+ E + +++ M
Sbjct: 318 CGREGILDEARRFFDDL--KLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEME----- 370
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
D EPD + YN ++ A V + V + G+ P+A TY
Sbjct: 371 ----------DNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITY---- 416
Query: 357 ESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
++ A+ + G ++A+ M++ G V Y + L R +D +
Sbjct: 417 --------TTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMI 468
Query: 417 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC--EPNIGTVNAMLK 474
++ +K L P IT+ ++ + G + + MK+ C EP+ T N ++
Sbjct: 469 KILCDMK-LNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKN-CGFEPDKETFNTLIS 526
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
Y R +++ E A G+T P TY+++L A A W+ E
Sbjct: 527 AYGRCGSEVDVAKMYGEMVAA---GFT----------PCITTYNALLNALARRGNWKAAE 573
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 594
V M G + ++T ++ LL S+AG LE + + P + ML++
Sbjct: 574 SVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFP-----SWMLLRT 628
Query: 595 IVQSNYE 601
+V +NY+
Sbjct: 629 LVLTNYK 635
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 165/429 (38%), Gaps = 86/429 (20%)
Query: 199 GLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC 258
G D+G+ +V+D + K + + YT ++ GKAG +AL +F M ++
Sbjct: 392 GFHDEGA-----AVID---TMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQM-KEL 442
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
P++ Y++V V LG+ ++++K++ M+ N P PD + +N
Sbjct: 443 GCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKL------------NGCP---PDRITWN 487
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKIN 378
+L C + K V V ++++ G +P T+ + +Y RC +V V +
Sbjct: 488 TMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMY-----G 542
Query: 379 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
E VAA G + Y L L G W+ A VV ++ + KP E +++ L
Sbjct: 543 EMVAA-------GFTPCITTYNALLNALARRGNWKAAESVVLDMRK-KGFKPNETSYSLL 594
Query: 439 IISSMDGGHIDDCISIFQHMKD-HCEP--------------------------------- 464
+ G++ + + D H P
Sbjct: 595 LHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGY 654
Query: 465 --NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
++ +N+ML ++ RN KA E+ + +SG L+P+ TY+S+++
Sbjct: 655 KLDMVVINSMLSMFVRNQKLEKAHEMLD---------VIHVSG----LQPNLVTYNSLID 701
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
A E + K + SG D + ++ + G + G P
Sbjct: 702 LYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQP 761
Query: 583 HPLFFTEML 591
P+ F +
Sbjct: 762 CPITFNTFM 770
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 149/377 (39%), Gaps = 71/377 (18%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
+ M G+M ++ G G +A+ V +K+ + + Y +L +
Sbjct: 401 IDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQ---MKELGCVPNVCTYNNVLVL 457
Query: 238 LGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---K 293
LGK R + ++I ++ L C PD ++++ G+ G K + +++ M+ +
Sbjct: 458 LGKRSRSEDMIKILCDMKLNGCP--PDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFE 515
Query: 294 PSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
P K N M+ + P + YNA+LNA WK V
Sbjct: 516 PDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESV 575
Query: 337 FKQLRKSGLKPSAATYGLAMESYR-----RCLLKVLVRAFWEEGKINEAVAAVR-----N 386
+RK G KP+ +Y L + Y R L KV + + +G + + +R N
Sbjct: 576 VLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIY--DGHVFPSWMLLRTLVLTN 633
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
+ R + G +++L NNG D +++ + ++ LE L + + G
Sbjct: 634 YKCRQLKGMERAFHQLQ----NNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSG- 688
Query: 447 HIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
+PN+ T N+++ +Y+R KA+E+ ++ + S
Sbjct: 689 ---------------LQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGIS-------- 725
Query: 507 GAPLKPDEYTYSSMLEA 523
PD +Y+++++
Sbjct: 726 -----PDVVSYNTVIKG 737
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 108/268 (40%), Gaps = 45/268 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L +G+W+ A SV V ++ K + Y+ LL KAG L + +
Sbjct: 559 LLNALARRGNWKAAESV---VLDMRKKGFKPNETSYSLLLHCYSKAGNVR-GLEKVEMEI 614
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D +++P ++ +T + LK + + +++ K D+V
Sbjct: 615 YDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKL---------------DMV 659
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC--------LLK-- 365
V N++L+ V + + + + + SGL+P+ TY ++ Y R +LK
Sbjct: 660 VINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDI 719
Query: 366 -------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
+++ F ++G + EA+ + M GV + C NG +
Sbjct: 720 QNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLF 779
Query: 413 QDAMLVVEKIKSLRHS-KPLEITFTGLI 439
+A V+ + + H P E+T+ +I
Sbjct: 780 AEADEVIRYM--IEHGCMPNELTYKIVI 805
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 109/504 (21%), Positives = 197/504 (39%), Gaps = 100/504 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G+WR+A+ V + DL + + +L+ + +AL F LM
Sbjct: 106 LINACGSCGNWREALRVCKKMTDNGVGPDLVTHNI---VLSAYKSGAQYSKALSYFELM- 161
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK------------------- 296
+ N+ PD + V L +V + +++ MR+K S+
Sbjct: 162 KGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRG 221
Query: 297 ---RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
K + ++P++V YNA+++A K F VF ++++SG P +Y
Sbjct: 222 QIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYT 281
Query: 354 LAMESYRRC-----------LLK------------VLVRAFWEEGKINEAVAAVRNMEQR 390
+ ++ R ++K L+ A+ G + +AV +R MEQ
Sbjct: 282 SLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQD 341
Query: 391 GV-VGTASVYYELACC--------------------------LCNN--------GRWQDA 415
G+ S+ LA C CN+ G ++ A
Sbjct: 342 GIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKA 401
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV-NAMLK 474
+ + +++ + +KP +TFT LI ++ + F+ M D P + ++M+
Sbjct: 402 INLYRSMEN-KTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMIC 460
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
YS+ KA+ LF L G G PD TY++M+ A + + WE
Sbjct: 461 AYSKQGQLVKAESLFNS-----------LKGSGCC--PDLVTYTAMINAYSASEMWEKVC 507
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 594
+Y+ M + QLD + L+ ++ + + + + E G + F EML
Sbjct: 508 ALYQEMEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSAC 567
Query: 595 IVQSNYEKAVALINAMAYAPFHIT 618
+ ++ KA LIN M FH+
Sbjct: 568 SILRDWRKATDLINLME-PSFHLV 590
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 154/363 (42%), Gaps = 47/363 (12%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLML 255
+K L GS + V DW +K++R+ +R +Y ++ + + R +A +F +
Sbjct: 1 MKELTQIGSIEHCVQVFDW---MKNQRNYCARNDIYNMMIRLHARHNRIDQARGLF-FEM 56
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD+ Y+++ G+ G + ++E M + + P
Sbjct: 57 QKWRCKPDVETYNALINAHGRAGQWRWATNIMEDMLR---------------AAIPPSRS 101
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+N ++NAC W+ V K++ +G+ P T+ + + +Y+
Sbjct: 102 TFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYK------------SGA 149
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR-HSKPLEIT 434
+ ++A++ M+ + + + CL ++ A+ + ++ R +P +T
Sbjct: 150 QYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVT 209
Query: 435 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
FT +I G I+DC ++F M + +PNI + NA++ Y+ + M +A +F+E
Sbjct: 210 FTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMK 269
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
R SG+ PD +Y+S++ + Q V+ M + C+ + +
Sbjct: 270 R---SGFC----------PDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYN 316
Query: 554 WLL 556
L+
Sbjct: 317 ALM 319
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 175/432 (40%), Gaps = 60/432 (13%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
WK R++ +S + + ++ GL G ++M + + + + DL F ++ +
Sbjct: 242 WK--RLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDL---FTFSSM 296
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L KAG + A ++F M+E L PD+ Y+++ L + G L + +L M +
Sbjct: 297 IHGLSKAGNFNAAEKVFQEMIES-GLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNN 355
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
I V YN ++ + + + + ++ L + GLK + TYGL
Sbjct: 356 CCNI----------------VSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGL 399
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
L+ + G +N+A+ + E G Y + LC G +
Sbjct: 400 ------------LINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQ 447
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 473
A+ ++ ++K R + F LI + +++ IS+ + MK C P + + N ++
Sbjct: 448 AVELIHQMKKNRRKLNSHV-FNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTII 506
Query: 474 KVYSRNDMFSKA----KELFEETTRANSSGYTFLSGDGAP-------------------L 510
+ + FS A KE+ EE + + Y+ L DG L
Sbjct: 507 NGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLI-DGLCRGEKVDMALNLWHQCINKRL 565
Query: 511 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 570
KPD ++ ++ TA + + ++ M C D H ++ +AG C
Sbjct: 566 KPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALK 625
Query: 571 AFDSLLEAGEIP 582
+D +LEAG P
Sbjct: 626 IWDRILEAGLQP 637
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 141/370 (38%), Gaps = 36/370 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L PD++ Y ++NA S +F ++ G+ P Y + ++ + R V
Sbjct: 180 LNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKAN 239
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
W+ R + + V + Y + LC G+ ++M + ++K S
Sbjct: 240 EIWK-----------RLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSP 288
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
L TF+ +I G+ + +FQ M + P++ T NAML R +K EL
Sbjct: 289 DL-FTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFEL 347
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+ ++ N +Y+ +++ + E ++ + G + D
Sbjct: 348 WNVMSKNNCCNIV--------------SYNMLIQGLLDNKKVEQAICYWQLLHERGLKAD 393
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVA 605
T + L+ + G L A L EA G ++ M+ + E+AV
Sbjct: 394 STTYGLLINGLCKNG---YLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVE 450
Query: 606 LINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALH 665
LI+ M + + L + KLE+ ++ L + TV + + ++
Sbjct: 451 LIHQMKKNRRKLNSHVFNSLING---YVRAFKLEEAISVLREMKSKDCAPTVVSYNTIIN 507
Query: 666 ALCRSEKERD 675
LC++E+ D
Sbjct: 508 GLCKAERFSD 517
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 105/255 (41%), Gaps = 28/255 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P + +N++LNA + S+QW+ F + +G+ P+ TY +L++
Sbjct: 112 PGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTY------------NILIKIS 159
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
++ + + + M + G+ Y L L +G DA+ + +++ S+R P
Sbjct: 160 CKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEM-SVRGVNPD 218
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+ + LI + G I++ + + P++ T N M+ + ++ E++
Sbjct: 219 VMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMW 278
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
+ S PD +T+SSM+ + A + E V++ M SG D
Sbjct: 279 NRMKKNEKS-------------PDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDV 325
Query: 550 TKHAWLLVEASRAGK 564
+ +L R GK
Sbjct: 326 RTYNAMLSGLFRTGK 340
Score = 39.7 bits (91), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 105/261 (40%), Gaps = 45/261 (17%)
Query: 449 DDCISIFQHMKD--HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
D +++FQ+M D C P I + N+ML + ++ + +A ELF +T+
Sbjct: 95 DQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREA-ELF----------FTYFQTA 143
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
G + P+ TY+ +++ S Q+E + + M +G D + L+ +++G
Sbjct: 144 G--MSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSG--- 198
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 626
+LL+A E+ F EM ++ + + + + F W L
Sbjct: 199 -------NLLDAVEL-----FDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLL 246
Query: 627 ESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQA 686
+ S + ++N LC + + N + ++EK DL + +
Sbjct: 247 TESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMK------KNEKSPDLFTFS------ 294
Query: 687 IDISPLHGIHEAFDVKETENV 707
S +HG+ +A + E V
Sbjct: 295 ---SMIHGLSKAGNFNAAEKV 312
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/461 (20%), Positives = 183/461 (39%), Gaps = 65/461 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLK L G W A+++L W + D + F ++ LG+ GR H+A+ +L
Sbjct: 118 LLKALELSGHWEWALALLRWARA-EGAADGPAPF--EMVVRALGREGR-HDAV---CALL 170
Query: 256 EDCNLYP----DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
++ L P D+ AY +V L + G + ++L + +R++ +
Sbjct: 171 DEMPLPPGARLDVRAYTTVLHALSREGRYERALRLFDELRREG---------------VA 215
Query: 312 PDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR--------- 361
P V YN VL+ W V + +R +G++P T + + R
Sbjct: 216 PTRVTYNVVLDVYGRMGRSWPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVA 275
Query: 362 ------------CLL--KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
C++ L++ F + G EA+ +R ME G A Y ELA
Sbjct: 276 FFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYA 335
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNI 466
G +Q+A ++ + + P T+ ++ + + G +D+ +++F MK + P
Sbjct: 336 RAGFYQEAAKCIDTMIG-KGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYT 394
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T N +L + + F+ E+ E +R+ + P+ T++++L
Sbjct: 395 NTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCT-------------PNRVTWNTLLAVCGK 441
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
Y V +GM +L + + L+ R G +D + AG P
Sbjct: 442 RGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTT 501
Query: 587 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 627
+ +L Q ++ A ++++ M F + ++ L +
Sbjct: 502 YNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQ 542
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 149/394 (37%), Gaps = 101/394 (25%)
Query: 224 DLKSR------FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
DLK+R Y LL + GKAG EALR+ M ED PD Y+ +A + +
Sbjct: 279 DLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLREM-EDAGCKPDAVTYNELAGSYARA 337
Query: 278 GLLKELVKLIERMRQK---PSKRIKNMHRKNW------DPVLE-----------PDLVVY 317
G +E K I+ M K P+ N + D L P Y
Sbjct: 338 GFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTY 397
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL--------AMESY--------RR 361
N VL ++ + + ++ +SG P+ T+ MESY +
Sbjct: 398 NLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKS 457
Query: 362 CLLKV-------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
C +++ L+ A+ G A M G + Y L L G W
Sbjct: 458 CKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTA 517
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI-------------------- 454
A +V K+KS KP +++++ L+ GG+ +I
Sbjct: 518 ARSIVSKMKS-EGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLV 576
Query: 455 ---------------FQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
FQ +K +P++ +N+ML +Y++N ++SKA E+FE +
Sbjct: 577 IANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLG-- 634
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQ-WE 531
L PD TY+S+++ A +++ WE
Sbjct: 635 -----------LSPDLITYNSLMDMYAKSNEPWE 657
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 76/443 (17%), Positives = 155/443 (34%), Gaps = 104/443 (23%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
K + M GL+ ++ G+ G +A+++ D +K + Y +L
Sbjct: 345 KCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDR---MKKNGFIPYTNTYNLVL 401
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
+LGK R L + M P+ ++++ G+ G+ + +++E M+
Sbjct: 402 GMLGKKSRFAAMLEMLGEM-SRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKV 460
Query: 296 KRIKNMHR----------------KNWDPV----LEPDLVVYNAVLNACVPSHQWKGVFW 335
+ ++ + K +D + P L YNA+LN W
Sbjct: 461 ELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARS 520
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRR-----------------------CLLKVLVRAFW 372
+ +++ G KP+ +Y L ++ + + +L+ LV A +
Sbjct: 521 IVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANF 580
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS---- 428
+ ++ A + ++ RG + + NG + AM + E I+ L S
Sbjct: 581 KCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLI 640
Query: 429 ---------------------------------------KPLEITFTGLIISSMDGGHID 449
KP +++ +I G I
Sbjct: 641 TYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIK 700
Query: 450 DCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
+ + M D P + T + ++ Y+ +MF++A+E+ GY
Sbjct: 701 EAQRVLSEMIADGVAPCVITYHTLVGGYASREMFAEAREVV---------GYMIQR---- 747
Query: 509 PLKPDEYTYSSMLEASATAHQWE 531
LKP E TY ++++ A ++E
Sbjct: 748 KLKPMELTYRRVVDSYCRAKRYE 770
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 72/186 (38%), Gaps = 19/186 (10%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+ +L+I K G +A+ +F +E L PD+ Y+S+ + E K++ R
Sbjct: 606 ILNSMLSIYAKNGLYSKAMEMFE-SIEQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNR 664
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+R S++ + L+PD+V YN V+N K V ++ G+ P
Sbjct: 665 LRSSQSQQQQQQQ------QLKPDVVSYNTVINGFCKEGLIKEAQRVLSEMIADGVAPCV 718
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY LV + EA V M QR + Y + C
Sbjct: 719 ITY------------HTLVGGYASREMFAEAREVVGYMIQRKLKPMELTYRRVVDSYCRA 766
Query: 410 GRWQDA 415
R++DA
Sbjct: 767 KRYEDA 772
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/509 (20%), Positives = 208/509 (40%), Gaps = 64/509 (12%)
Query: 198 KGLGDKGSWRQAMSVLDW-VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LML 255
KGL G+W++A+ + W + L + + + ++ ILG+ + ALR+ + + +
Sbjct: 143 KGLDLSGNWKRAVLLFKWAILNLYSRNEKIDNQLVELMVRILGRESQHSVALRLLDEISV 202
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ +L D+ A+ ++ ++G + + + E+MR+ L P LV
Sbjct: 203 EEYSL--DVRAWTTILHAYSRIGKYERAITMFEKMRKTG---------------LSPTLV 245
Query: 316 VYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY-RRCLL--------- 364
YN +L+ W + + ++R +GL+ T + + R LL
Sbjct: 246 TYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFAR 305
Query: 365 -------------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
L++ F + G +EA++ ++ ME+ Y EL G
Sbjct: 306 LKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGF 365
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
++ ++ + + P IT+T +I + G D +S F+ MK+ C PN+ T N
Sbjct: 366 HEEGADFIDTMIR-KGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYN 424
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
A+L + + S+ +E+ + S+G P+ T+++ML
Sbjct: 425 AILGMLGKK---SRLEEMIDMLCDMRSNG----------CAPNSVTWNTMLAMCGNKGMH 471
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
+Y V++ M G + ++ L+ R G + ++ +++AG P + +
Sbjct: 472 KYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNAL 531
Query: 591 LIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNA 650
L + ++E A ++I M F E ++ + + +EK+ + N +
Sbjct: 532 LNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHI 591
Query: 651 ASSEITVSNL------SRALHALCRSEKE 673
S I + L RAL + R+ +E
Sbjct: 592 FPSWILLRTLVLANFKRRALMGMERAFQE 620
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 164/399 (41%), Gaps = 43/399 (10%)
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
D++ + K + + YT ++ GKAG+ +AL F M E P++ Y+++
Sbjct: 371 DFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKES-GCVPNVCTYNAILGM 429
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
LG+ L+E++ ++ MR P+ V +N +L C K V
Sbjct: 430 LGKKSRLEEMIDMLCDMRSNGCA---------------PNSVTWNTMLAMCGNKGMHKYV 474
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
VF++++ G +P+ T+ + +Y RC ++ V +EE M + G
Sbjct: 475 NRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEE------------MIKAGFT 522
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
+ Y L L G W+ A V+ +KS + KP E +++ ++ GG+
Sbjct: 523 PCVTTYNALLNALARRGDWEAAESVILDMKS-KGFKPNETSYSLMLNCYAKGGNGRGIEK 581
Query: 454 IFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
I + + + H P+ + ++ + + F+E + GY KP
Sbjct: 582 IEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCK---HGY----------KP 628
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
D ++SML A ++ + + + SG Q D + L+ +R G+C E
Sbjct: 629 DLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEIL 688
Query: 573 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ ++G P + + ++ Q ++A+ ++ M
Sbjct: 689 KGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMT 727
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 106/488 (21%), Positives = 183/488 (37%), Gaps = 124/488 (25%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M +GL F E ++ G +G +A + LK + + F Y LL + GK
Sbjct: 271 MRSNGLEFDEFTCSTVISACGREGLLDEARK---FFARLKSEGYVAGTFTYNSLLQVFGK 327
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSK- 296
AG EAL I M E N PD+ Y+ + + G +E I+ M +K P+
Sbjct: 328 AGIYSEALSILKEM-EKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAI 386
Query: 297 ----------------RIKNMHRKNWDPVLEPDLVVYNAVL------------------- 321
+ + R+ + P++ YNA+L
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDM 446
Query: 322 --NACVP-SHQW-------------KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
N C P S W K V VF++++ G +P+ T+ + +Y RC +
Sbjct: 447 RSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQ 506
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+ V +EE M + G + Y L L G W+ A V+ +KS
Sbjct: 507 IDVVKMYEE------------MIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKS- 553
Query: 426 RHSKPLEITFTGLIISSMDGGH------IDDCI--------------------------- 452
+ KP E +++ ++ GG+ I++ I
Sbjct: 554 KGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMG 613
Query: 453 --SIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
FQ H +P++ N+ML ++++N M+ +A E+ +
Sbjct: 614 MERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESG------------- 660
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
L+PD TY+S+++ A + E + KG+ SG + D + ++ R G L++
Sbjct: 661 LQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQG---LMQ 717
Query: 570 HAFDSLLE 577
A +L E
Sbjct: 718 EAIRTLSE 725
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 79/189 (41%), Gaps = 14/189 (7%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+PDLV++N++L+ + + + + +R+SGL+P TY M+ Y R
Sbjct: 627 KPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYAR--------- 677
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
G+ + ++ +++ G Y + C G Q+A+ + ++ ++ +P
Sbjct: 678 ---GGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEM-TISGIRP 733
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+T+ + G + + +M H C PN T ++ Y + + +A +
Sbjct: 734 CIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFV 793
Query: 490 EETTRANSS 498
T + S
Sbjct: 794 SNITEMDKS 802
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 155/383 (40%), Gaps = 59/383 (15%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+R + Y ++A L KA +A+ + M++ + PD Y+S+ G
Sbjct: 109 DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS-GVMPDCMTYNSIVHGFCSSGQP 167
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
KE + +++MR +EPD+V YN++++ + + +F +
Sbjct: 168 KEAIVFLKKMRSDG---------------VEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 212
Query: 341 RKSGLKPSAATYGLAMESY-----------------------RRCLLKVLVRAFWEEGKI 377
K GLKP TYG ++ Y + +LV A+ ++ K+
Sbjct: 213 TKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKV 272
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI--KSLRHSKPLEITF 435
EA+ M Q+G+ A Y + LC +GR +DAML E++ + LR P I +
Sbjct: 273 EEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLR---PDSIVY 329
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
LI S + +F M D C I N+++ + + ++ +LF+
Sbjct: 330 NSLIHSLCIFDKWEKAEELFLEMLDRGICLSTI-FFNSIIDSHCKEGRVIESGKLFDLMV 388
Query: 494 RA------------NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
R + + F++ L P+ +TY M E E + ++ M
Sbjct: 389 RIGVKPDIITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 448
Query: 542 LSGCQLDQTKHAWLLVEASRAGK 564
+GC +D +++ E + G+
Sbjct: 449 DNGCTVDSGMLNFIVRELLQRGE 471
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 135/351 (38%), Gaps = 64/351 (18%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQVGLL 280
+R + F Y LL L R EAL + ++M +D + PD+ +Y +V + G L
Sbjct: 45 RRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL 104
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+++ D + P++V YN+++ A + V +
Sbjct: 105 DKML----------------------DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 142
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
KSG+ P TY +V F G+ EA+ ++ M GV Y
Sbjct: 143 VKSGVMPDCMTY------------NSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYN 190
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-K 459
L LC NGR +A + + + R KP T+ L+ G + + + M +
Sbjct: 191 SLMDYLCKNGRCTEARKIFDSMTK-RGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVR 249
Query: 460 DHCEPNIGTVNAMLKVYSRND-------MFSKAKE---------------LFEETTRANS 497
+ PN + ++ Y++ + +FSK ++ + ++ R
Sbjct: 250 NGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVED 309
Query: 498 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE-----YFEYVYKGMALS 543
+ F L+PD Y+S++ + +WE + E + +G+ LS
Sbjct: 310 AMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLS 360
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/466 (19%), Positives = 188/466 (40%), Gaps = 56/466 (12%)
Query: 131 DVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLM--- 187
+V +F + VE ++ +++ +++D L R K + + M G++
Sbjct: 195 EVDFCVRFFHRMVE---SNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPN 251
Query: 188 -FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
FT +L G D+ + + +++ ++ + S Y+ L+ +G E
Sbjct: 252 VFTYNTLLNAYVGRKDRKGVDEILKLME------KEQVVFSVATYSILIQWYSSSGDIEE 305
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
A +IF M E N+ D+ Y S+ ++G +K L + M Q+
Sbjct: 306 AEKIFEEMREK-NIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRD------------ 352
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
+ P+ Y A++ + Q + + +++ G+ + + M+ Y R
Sbjct: 353 ---IVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCR----- 404
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
GK++EA+ ME++G+ Y LA LC R+ +A ++ + +
Sbjct: 405 -------RGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVE-K 456
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKA 485
KP +TFT I G++ + +F+ M+ E PNI T N ++ Y + + +A
Sbjct: 457 GVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQA 516
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
++ E L PD YTYSS++ + + ++ M L G
Sbjct: 517 HKIKSEMINKG-------------LLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGI 563
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + ++ S+ G+ +D +++ G IP FT ++
Sbjct: 564 TRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLV 609
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/509 (20%), Positives = 208/509 (40%), Gaps = 64/509 (12%)
Query: 198 KGLGDKGSWRQAMSVLDW-VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN-LML 255
KGL G+W++A+ + W + L + + + ++ ILG+ + ALR+ + + +
Sbjct: 143 KGLDLSGNWKRAVLLFKWAILNLYSRNEKIDNQLVELMVRILGRESQHSVALRLLDEISV 202
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ +L D+ A+ ++ ++G + + + E+MR+ L P LV
Sbjct: 203 EEYSL--DVRAWTTILHAYSRIGKYERAITMFEKMRKTG---------------LSPTLV 245
Query: 316 VYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY-RRCLL--------- 364
YN +L+ W + + ++R +GL+ T + + R LL
Sbjct: 246 TYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFAR 305
Query: 365 -------------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
L++ F + G +EA++ ++ ME+ Y EL G
Sbjct: 306 LKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGF 365
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
++ ++ + + P IT+T +I + G D +S F+ MK+ C PN+ T N
Sbjct: 366 HEEGADFIDTMIR-KGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYN 424
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
A+L + + S+ +E+ + S+G P+ T+++ML
Sbjct: 425 AILGMLGKK---SRLEEMIDMLCDMRSNG----------CAPNSVTWNTMLAMCGNKGMH 471
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
+Y V++ M G + ++ L+ R G + ++ +++AG P + +
Sbjct: 472 KYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNAL 531
Query: 591 LIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNA 650
L + ++E A ++I M F E ++ + + +EK+ + N +
Sbjct: 532 LNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHI 591
Query: 651 ASSEITVSNL------SRALHALCRSEKE 673
S I + L RAL + R+ +E
Sbjct: 592 FPSWILLRTLVLANFKRRALMGMERAFQE 620
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 164/399 (41%), Gaps = 43/399 (10%)
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
D++ + K + + YT ++ GKAG+ +AL F M E P++ Y+++
Sbjct: 371 DFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKES-GCVPNVCTYNAILGM 429
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
LG+ L+E++ ++ MR P+ V +N +L C K V
Sbjct: 430 LGKKSRLEEMIDMLCDMRSNGCA---------------PNSVTWNTMLAMCGNKGMHKYV 474
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
VF++++ G +P+ T+ + +Y RC ++ V +EE M + G
Sbjct: 475 NRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEE------------MIKAGFT 522
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
+ Y L L G W+ A V+ +KS + KP E +++ ++ GG+
Sbjct: 523 PCVTTYNALLNALARRGDWEAAESVILDMKS-KGFKPNETSYSLMLNCYAKGGNGRGIEK 581
Query: 454 IFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
I + + + H P+ + ++ + + F+E + GY KP
Sbjct: 582 IEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCK---HGY----------KP 628
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
D ++SML A ++ + + + SG Q D + L+ +R G+C E
Sbjct: 629 DLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEIL 688
Query: 573 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ ++G P + + ++ Q ++A+ ++ M
Sbjct: 689 KGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMT 727
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 106/488 (21%), Positives = 183/488 (37%), Gaps = 124/488 (25%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M +GL F E ++ G +G +A + LK + + F Y LL + GK
Sbjct: 271 MRSNGLEFDEFTCSTVISACGREGLLDEARK---FFARLKSEGYVAGTFTYNSLLQVFGK 327
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSK- 296
AG EAL I M E N PD+ Y+ + + G +E I+ M +K P+
Sbjct: 328 AGIYSEALSILKEM-EKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAI 386
Query: 297 ----------------RIKNMHRKNWDPVLEPDLVVYNAVL------------------- 321
+ + R+ + P++ YNA+L
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDM 446
Query: 322 --NACVP-SHQW-------------KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
N C P S W K V VF++++ G +P+ T+ + +Y RC +
Sbjct: 447 RSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQ 506
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+ V +EE M + G + Y L L G W+ A V+ +KS
Sbjct: 507 IDVVKMYEE------------MIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKS- 553
Query: 426 RHSKPLEITFTGLIISSMDGGH------IDDCI--------------------------- 452
+ KP E +++ ++ GG+ I++ I
Sbjct: 554 KGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMG 613
Query: 453 --SIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
FQ H +P++ N+ML ++++N M+ +A E+ +
Sbjct: 614 MERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESG------------- 660
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
L+PD TY+S+++ A + E + KG+ SG + D + ++ R G L++
Sbjct: 661 LQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQG---LMQ 717
Query: 570 HAFDSLLE 577
A +L E
Sbjct: 718 EAIRTLSE 725
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 79/189 (41%), Gaps = 14/189 (7%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+PDLV++N++L+ + + + + +R+SGL+P TY M+ Y R
Sbjct: 627 KPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYAR--------- 677
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
G+ + ++ +++ G Y + C G Q+A+ + ++ ++ +P
Sbjct: 678 ---GGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEM-TISGIRP 733
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+T+ + G + + +M H C PN T ++ Y + + +A +
Sbjct: 734 CIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFV 793
Query: 490 EETTRANSS 498
T + S
Sbjct: 794 SNITEMDKS 802
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 168/411 (40%), Gaps = 74/411 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G W +A + + +K + L + + L+A + G+ A R+ + M
Sbjct: 107 LMDAYGRTKQWTEAENTF---HLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMK 163
Query: 256 EDCNLYPDIAAYHSVAVTLGQVG---LLKELVKLIERMRQKP-----------------S 295
E N P + Y++ L + G L +++ + ++ P S
Sbjct: 164 ES-NCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHS 222
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNA------CVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ +++ + + P L Y A++NA CV + + +F +L+ G P
Sbjct: 223 AKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEE------IFAELQSVGFVPDI 276
Query: 350 ATYGLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRN 386
TY +E+Y R +L+ AF G I++A A +
Sbjct: 277 YTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDS 336
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
M++ G T + L GR DA V +++S+ +P F L+ + + G
Sbjct: 337 MKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESM-GVEPDTFMFNSLLGAYGNSG 395
Query: 447 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
+D S+++ M+ C+P+I T+N ++ VY++ +A+E+F S G+T
Sbjct: 396 RMDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSL---ESKGFT---- 448
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
PD +++S++ A + + VY+ M ++GC D+ LL
Sbjct: 449 ------PDVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAGCIPDRATAKVLL 493
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 161/433 (37%), Gaps = 58/433 (13%)
Query: 206 WRQAMSVLDWVY-GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI 264
WR A+ + +W+ G K D+ + L+ G+ + EA F+LM + P
Sbjct: 81 WRSAIVIYEWILQGSMFKPDVG---CFNMLMDAYGRTKQWTEAENTFHLM-KKFQCLPTE 136
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
+++ + + G L+ +++ M++ P LV YN L
Sbjct: 137 TSFNVLMAAYSRGGQLERAERVLHEMKESNCS---------------PGLVTYNTYLEVL 181
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY----------------RRCLL---- 364
S W+ VF++++ G+ P+ T+ L + Y R+ L
Sbjct: 182 NKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSL 241
Query: 365 ---KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
L+ A EG A ++ G V Y L G A V E
Sbjct: 242 FTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFET 301
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRND 480
+ K +++ LI + G I D +I+ MK +P + + +L + +
Sbjct: 302 MLEA-GVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAG 360
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
+ A+ R S G ++PD + ++S+L A + + + E +Y+ M
Sbjct: 361 RVTDAENFVR---RLESMG----------VEPDTFMFNSLLGAYGNSGRMDKMESLYESM 407
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 600
S C+ D L+ ++ G E F+SL G P + +T ++ + Y
Sbjct: 408 QGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLY 467
Query: 601 EKAVALINAMAYA 613
K V++ M A
Sbjct: 468 RKCVSVYQKMLIA 480
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 122/296 (41%), Gaps = 35/296 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLM 254
L+ GL G W++ + W L R F +T L+ L K G+ EA +I LM
Sbjct: 1161 LIHGLSRAGLWKE----VTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELM 1216
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
PDI Y+++ L VG L++ KL E + D ++ ++
Sbjct: 1217 RHKGK-EPDILTYNTLMNGLCLVGQLEDATKLFESLA---------------DRGIKLNV 1260
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
YN ++N + F F+++R GLKPS TY L+ A +
Sbjct: 1261 FSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTY------------NTLIGALCQS 1308
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
G++ A M+ G S Y L LC NG ++AM + + IK H +E+
Sbjct: 1309 GRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEV- 1367
Query: 435 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
F+ L+ G +++ F + K+ EP+ N ++ M S+A +L
Sbjct: 1368 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 1423
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 107/264 (40%), Gaps = 30/264 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++ L K G EAL +F+ M+ + PD+ Y S+ L + G LKE ++ +
Sbjct: 1086 FTYGMIIDALCKDGMTTEALDMFSEMI-GAGILPDVVVYSSLMDGLCRFGRLKEALEFFK 1144
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M + + D+ YN++++ + WK V W + G P
Sbjct: 1145 EMEGRG---------------ISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 1189
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
A T+ +L+ +EGK+ EA + M +G Y L LC
Sbjct: 1190 AFTF------------TILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCL 1237
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 467
G+ +DA + E + R K ++ LI ID+ F+ M+ +P+
Sbjct: 1238 VGQLEDATKLFESLAD-RGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTV 1296
Query: 468 TVNAMLKVYSRNDMFSKAKELFEE 491
T N ++ ++ A++LF E
Sbjct: 1297 TYNTLIGALCQSGRVRTAQKLFVE 1320
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 122/312 (39%), Gaps = 28/312 (8%)
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
M+RK D ++PDL N +++ C F VF K G +P A T
Sbjct: 968 MYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVT--------- 1018
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
+ LV+ W E I +AV M ++G++G A Y L LC + A+ + E
Sbjct: 1019 ---VTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHE 1075
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 479
K+K + K T+ +I + G + + +F M P++ ++++ R
Sbjct: 1076 KMKG--NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRF 1133
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
+A E F+E +G + D YTY+S++ + A W+ +
Sbjct: 1134 GRLKEALEFFKEM-------------EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL 1180
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
M G D L+ + GK + + + G+ P L + ++ +
Sbjct: 1181 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQ 1240
Query: 600 YEKAVALINAMA 611
E A L ++A
Sbjct: 1241 LEDATKLFESLA 1252
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S Y L+ L ++GR A ++F + ++ C + ++ Y + L + G L+E + L
Sbjct: 1294 STVTYNTLIGALCQSGRVRTAQKLF-VEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDL 1352
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +++ K P++ V++ +L+ + + + + F ++ K+GL+
Sbjct: 1353 FQSIKKTEHK---------------PNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 1397
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P Y +L+ +G ++EAV + ME++G + + + + L
Sbjct: 1398 PDTIAY------------NILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 1445
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
+A+ ++E++++ S +T L ++S D
Sbjct: 1446 LKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFD 1483
>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
Length = 495
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 148/387 (38%), Gaps = 33/387 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
E + YNA LNA V +F + P+ TYG +++R
Sbjct: 33 FEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYG------------IVLR 80
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
++ K + A+ +++ME + + T + L CLC NG+ A E K L
Sbjct: 81 GLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAY---ELYKRLSDEC 137
Query: 430 PLE-ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKE 487
L+ I++ L ID +++F M+++ P++ T N +L Y R +A
Sbjct: 138 SLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMT 197
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
L EE G+ + PD Y+Y++++ A Q YV + M SGC
Sbjct: 198 LLEEMIEGKK---------GSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSP 248
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 607
+ LL GK F+ ++E P + +T ++ +KA
Sbjct: 249 NVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYF 308
Query: 608 NAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHAL 667
M +T L D +K+E L L ++ E V +R + AL
Sbjct: 309 VDMLRRGVEPNVYTYTALIGGLCD---ANKVEDALEILKRMSSTGREPNVVTYTRVIGAL 365
Query: 668 CRS---EKERDLSSSAHFGSQAIDISP 691
C+ E+ L + A GS+ P
Sbjct: 366 CKGGQIERATKLFNDA-MGSRTAKCKP 391
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 169/434 (38%), Gaps = 78/434 (17%)
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
M TE ++ +L+ + S + A V W +D + F Y L L K G +
Sbjct: 1 MATEDDVIHVLENIK---SPKLASRVFKWAARQEDFE--HTVFTYNAYLNALVKGGHGSK 55
Query: 247 ALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM- 301
A +IF+ ML ++C P+I Y V L ++L++ M K P+ I NM
Sbjct: 56 ARKIFDDMLYKEC--LPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNML 113
Query: 302 -----HRKNWDPVLE----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
D E D + YN + + Q VF ++ ++ +
Sbjct: 114 VSCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVV 173
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM--EQRG--VVGTASVYYEL 402
PS TY + Y R G++ +A+ + M ++G VV Y +
Sbjct: 174 PSLLTYNGLLYGYCR------------AGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTV 221
Query: 403 ACCLCNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD- 460
C + A V+ + IKS P +TF L+ G +D+ ++F++M +
Sbjct: 222 ISGFCKARQLPTARYVLRRMIKS--GCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVER 279
Query: 461 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 520
+CEP T ++ ++R KA + F + R ++P+ YTY+++
Sbjct: 280 NCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRG-------------VEPNVYTYTAL 326
Query: 521 LEASATAHQWEYFEYVYKGMALSG---------------CQLDQTKHAWLLVE---ASRA 562
+ A++ E + K M+ +G C+ Q + A L SR
Sbjct: 327 IGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRT 386
Query: 563 GKCHLLEHAFDSLL 576
KC +A+ +++
Sbjct: 387 AKCKPDSYAYSTII 400
>gi|449523013|ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like, partial [Cucumis sativus]
Length = 594
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 109/504 (21%), Positives = 197/504 (39%), Gaps = 100/504 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G+WR+A+ V + DL + + +L+ + +AL F LM
Sbjct: 11 LINACGSCGNWREALRVCKKMTDNGVGPDLVTHNI---VLSAYKSGAQYSKALSYFELM- 66
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK------------------- 296
+ N+ PD + V L +V + +++ MR+K S+
Sbjct: 67 KGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRG 126
Query: 297 ---RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
K + ++P++V YNA+++A K F VF ++++SG P +Y
Sbjct: 127 QIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYT 186
Query: 354 LAMESYRRC-----------LLK------------VLVRAFWEEGKINEAVAAVRNMEQR 390
+ ++ R ++K L+ A+ G + +AV +R MEQ
Sbjct: 187 SLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQD 246
Query: 391 GV-VGTASVYYELACC--------------------------LCNN--------GRWQDA 415
G+ S+ LA C CN+ G ++ A
Sbjct: 247 GIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKA 306
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV-NAMLK 474
+ + +++ + +KP +TFT LI ++ + F+ M D P + ++M+
Sbjct: 307 INLYRSMEN-KTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMIC 365
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
YS+ KA+ LF L G G PD TY++M+ A + + WE
Sbjct: 366 AYSKQGQLVKAESLFNS-----------LKGSGCC--PDLVTYTAMINAYSASEMWEKVC 412
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 594
+Y+ M + QLD + L+ ++ + + + + E G + F EML
Sbjct: 413 ALYQEMEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSAC 472
Query: 595 IVQSNYEKAVALINAMAYAPFHIT 618
+ ++ KA LIN M FH+
Sbjct: 473 SILRDWRKATDLINLME-PSFHLV 495
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 108/249 (43%), Gaps = 27/249 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ P +N ++NAC W+ V K++ +G+ P T+ + + +Y+
Sbjct: 1 IPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYK--------- 51
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR-HS 428
+ ++A++ M+ + + + CL ++ A+ + ++ R
Sbjct: 52 ---SGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSEC 108
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
+P +TFT +I G I+DC ++F M + +PNI + NA++ Y+ + M +A
Sbjct: 109 RPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFS 168
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
+F+E R SG+ PD +Y+S++ + Q V+ M + C+
Sbjct: 169 VFDEMKR---SGFC----------PDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKP 215
Query: 548 DQTKHAWLL 556
+ + L+
Sbjct: 216 NLVSYNALM 224
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 123/292 (42%), Gaps = 39/292 (13%)
Query: 304 KNWD---PVLE---------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K WD PV E PD++ YN ++ + Q ++ L ++ P+ T
Sbjct: 153 KKWDLIIPVCEWILYRSSFRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDT 212
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y L L+RA+ G ++ A + M + G+ A+VY L
Sbjct: 213 YAL------------LLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARC 260
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 470
+ A+ V +++K R E TFT +I + +F MK C+PNI T
Sbjct: 261 TEKAVEVYQRMKRERCRANTE-TFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYT 319
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
A++ ++R + KA+E+FEE +A +PD Y Y++++EA + A
Sbjct: 320 ALVNAFAREGLCEKAEEVFEEMQQAGH-------------EPDVYAYNALMEAYSRAGLP 366
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ ++ M GC+ D+ + L+ RAG E F+ L + G P
Sbjct: 367 QGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSP 418
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 113/262 (43%), Gaps = 33/262 (12%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K +R + +T ++ + GKA +P ++++FN M + P+I Y ++ + G
Sbjct: 271 MKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEM-KSIGCKPNICTYTALVNAFAREG 329
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
L ++ ++ E M+Q EPD+ YNA++ A + +G +F
Sbjct: 330 LCEKAEEVFEEMQQAGH---------------EPDVYAYNALMEAYSRAGLPQGASEIFS 374
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
++ G +P A+Y + +++Y R L A +EE ++QRG+ T
Sbjct: 375 LMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEE------------LKQRGMSPTMKS 422
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQ 456
+ L L + R +A E + L S P ++ + G +DD +F
Sbjct: 423 HMLL---LAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFA 479
Query: 457 HMKDHCEPNIGTVNAMLKVYSR 478
M+ + ++GT N + Y R
Sbjct: 480 AMERRGDADVGTYNVAVNAYGR 501
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/445 (20%), Positives = 173/445 (38%), Gaps = 54/445 (12%)
Query: 124 LNWVLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMN 182
LN +++ +G F +V KR + + + L+ L + K F +
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156
Query: 183 QSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAG 242
G + L+ G+ G R A+ L + G K D+ +Y ++ + K
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDV---VMYNTIIDAMCKYQ 213
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM------------ 290
EA +F+ M + D+ Y+++ VG LKE + L+ M
Sbjct: 214 LVSEAYGLFSEMAVK-GISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTY 272
Query: 291 --------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
++ K K++ ++PD++ Y+ +++ ++ K VF +
Sbjct: 273 NILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL 332
Query: 343 SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
G+ P TY +L+ F + ++EA+ + M Q+ +V Y L
Sbjct: 333 MGVTPDVHTY------------TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHMKDH 461
LC +GR ++++++ +P + IT++ LI GH+D I++F MKD
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRD--RGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438
Query: 462 -CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 520
PNI T +L + A+E+F++ + GY + YTY+ M
Sbjct: 439 EIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLL---TKGYHL----------NVYTYNVM 485
Query: 521 LEASATAHQWEYFEYVYKGMALSGC 545
+ E + M +GC
Sbjct: 486 INGHCKQGLLEEALTMLSKMEDNGC 510
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 146/363 (40%), Gaps = 60/363 (16%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++D + + ++ ++ + M G+ L+ G G ++A+ GL
Sbjct: 205 IIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAI-------GLL 257
Query: 221 DKRDLKS----RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV------ 270
++ LK+ + Y L+ L K G+ EA + +ML+ C + PD+ Y ++
Sbjct: 258 NEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKAC-VKPDVITYSTLMDGYFL 316
Query: 271 ------------AVTLGQVG--------LLKELVKLIERMRQKPSKRIKNMHRKNWDPVL 310
A++L V L+ K +M + K MH+KN +
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK--NKMVDEALNLFKEMHQKN----M 370
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
P +V Y+++++ S + V+ + ++R G TY L+
Sbjct: 371 VPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYS------------SLIDG 418
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ G ++ A+A M+ + + + L LC GR +DA V + + L
Sbjct: 419 LCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDL--LTKGYH 476
Query: 431 LEI-TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
L + T+ +I G +++ +++ M+D+ C PN T ++ + D KA++L
Sbjct: 477 LNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKL 536
Query: 489 FEE 491
+
Sbjct: 537 LRQ 539
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 104/270 (38%), Gaps = 36/270 (13%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++PDL+ N ++N Q F V ++ K G P T L L++
Sbjct: 90 IQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVT------------LNTLIK 137
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+G++ +A+ + +G Y L +C G + A+ + KI R +K
Sbjct: 138 GLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDG-RLTK 196
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P + + +I + + + +F M ++ T N ++ + +A L
Sbjct: 197 PDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGL 256
Query: 489 FEETT--RANSSGYTF------LSGDG--------------APLKPDEYTYSSMLEASAT 526
E N + YT+ L +G A +KPD TYS++++
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFL 316
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
++ + ++V+ M+L G D + L+
Sbjct: 317 VYEVKKAQHVFNAMSLMGVTPDVHTYTILI 346
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/496 (20%), Positives = 192/496 (38%), Gaps = 76/496 (15%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
V++D +R M + ++ M + G + ++ GL +A+ + + + L
Sbjct: 85 VMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERL 144
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ +S + ++ L + + +A ++F+ M E ++ PD +Y + L + G
Sbjct: 145 GCTPNRRS---HNTIILGLCQQSKIDQACQVFHEM-EAKDIPPDSWSYGILIDGLAKAGK 200
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L E KL +RM D + P V YN V++ ++ +FK
Sbjct: 201 LNEAYKLFQRM---------------LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+R G +PS T+ +L+ A + GK++EA ++ M G V Y
Sbjct: 246 MRSKGCRPSRFTF------------NILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTY 293
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
L LC+ R DA ++E + R KP +T LI G I + + M
Sbjct: 294 STLISGLCSIARVDDARHLLEDMVK-RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV 352
Query: 460 DHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETT----RANSSGYTFL----------- 503
+ P++ T N ++ + R +A+EL + N YT L
Sbjct: 353 SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 412
Query: 504 --SGDGAPLK-----PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
G A +K P+ +TY++++ +A Q + ++ M +G D + L
Sbjct: 413 EACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLA 472
Query: 557 VEASRAGKC---------------------HLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
E ++G+ + A D LLEAG++ L F +++
Sbjct: 473 AELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGG 532
Query: 596 VQSNYEKAVALINAMA 611
E+ +L+ +
Sbjct: 533 QLPAPERCASLVAGLC 548
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/416 (19%), Positives = 162/416 (38%), Gaps = 51/416 (12%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S Y ++ K G EA + M+ED ++ PD+ Y++V L + ++E + L
Sbjct: 79 SPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHV-PDVVTYNTVMDGLCKSSRVEEALLL 137
Query: 287 ---IERMRQKPSKRIKNM------HRKNWDPVLE-----------PDLVVYNAVLNACVP 326
+ER+ P++R N + D + PD Y +++
Sbjct: 138 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAK 197
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRN 386
+ + + +F+++ SG+ PSA TY + + CL L +EA+ ++
Sbjct: 198 AGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGM--CLAYTL----------DEALELFKS 245
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
M +G + + L C G+ +A +++++ H P +T++ LI
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHV-PDVVTYSTLISGLCSIA 304
Query: 447 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
+DD + + M K C+P + T N ++ + +A+E+ + + S
Sbjct: 305 RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS------- 357
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
PD TY++++ A Q E + M G + + L+ +A +
Sbjct: 358 ------PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 411
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA---PFHIT 618
F + +G P+ +T +++ + + L M A P H+
Sbjct: 412 PEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVV 467
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/397 (18%), Positives = 156/397 (39%), Gaps = 48/397 (12%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
S YT L+ L A +A +F ++ C P Y+ + + G+L+E
Sbjct: 44 STVAYTSLIHGLCMANSFDDARELFADMNRRGCP--PSPVTYNVMIDASCKRGMLEEACD 101
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
LI++M I++ H PD+V YN V++ S + + +F ++ + G
Sbjct: 102 LIKKM-------IEDGH--------VPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGC 146
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
P+ ++ ++ ++ KI++A ME + + + Y L
Sbjct: 147 TPNRRSH------------NTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDG 194
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 464
L G+ +A + +++ P +T+ +I +D+ + +F+ M+ C P
Sbjct: 195 LAKAGKLNEAYKLFQRMLD-SGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRP 253
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
+ T N ++ + + K E F R G+ PD TYS+++
Sbjct: 254 SRFTFNILIDAHCKR---GKLDEAFRLLKRMTDDGHV----------PDVVTYSTLISGL 300
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
+ + + ++ + M C+ L+ +AG+ D+++ +G+ P
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHIT 618
+ + ++ E+A L++ M AP +T
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVT 397
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/391 (18%), Positives = 160/391 (40%), Gaps = 47/391 (12%)
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
+N+ +K + P V Y ++++ ++ + +F + + G PS TY
Sbjct: 30 RNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTY------ 83
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
V++ A + G + EA ++ M + G V Y + LC + R ++A+L+
Sbjct: 84 ------NVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLL 137
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYS 477
+++ L P + +I+ ID +F M+ P+ + ++ +
Sbjct: 138 FNEMERL-GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLA 196
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+ ++A +LF+ R SG T P TY+ ++ A+ + ++
Sbjct: 197 KAGKLNEAYKLFQ---RMLDSGIT----------PSAVTYNVVIHGMCLAYTLDEALELF 243
Query: 538 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQA 594
K M GC+ + L+ + GK L+ AF + + G +P + ++ ++
Sbjct: 244 KSMRSKGCRPSRFTFNILIDAHCKRGK---LDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 595 IVQSNYEKAVALINAMA---YAPFHITERQWTE-LFESNEDRISRDKLEKLLNALCNCNA 650
+ + A L+ M P +T+ L ++ + +R+ +L+A+ +
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEARE----VLDAMVSSGQ 356
Query: 651 ASSEITVSNLSRALHALCR---SEKERDLSS 678
+ +T + L +H CR +E+ R+L S
Sbjct: 357 SPDVVTYNTL---VHGHCRAGQTERARELLS 384
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 96/258 (37%), Gaps = 44/258 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G ++A VLD + D+ Y L+ +AG+ A + + M+
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDV---VTYNTLVHGHCRAGQTERARELLSDMV 387
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
L P++ Y ++ L + L E + +M+ P+L
Sbjct: 388 AR-GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA---------------PNLF 431
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL-------------AMESYRRC 362
Y A++ + Q G +F ++ +G+ P YG A+E R
Sbjct: 432 TYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREG 491
Query: 363 ------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+ + V E GK+ A+ VR+M + G + L LC +G
Sbjct: 492 RESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSG 551
Query: 411 RWQDAMLVVEKIKSLRHS 428
+ +A V+E+I L +
Sbjct: 552 QGGEARAVLEEIMDLAYG 569
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 163/399 (40%), Gaps = 53/399 (13%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LL L KAG A+ IF + ++ A H +A +L V ++ + + Q+
Sbjct: 175 LLKDLSKAGLGFRAVEIFEWLR-------NLDANHPLA-SLCDVYTYTAMISMC--IYQQ 224
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
R ++ ++ +E ++ Y A++N C+ + +R+ G P+ TY
Sbjct: 225 DVDRAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTYNHMRQDGACPNVVTYN 284
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACCLCNNGR 411
++ Y + WE+G + + M+ GV Y L AC +C R
Sbjct: 285 TLIDVYGK-------MGLWEQG-----IKVLTLMKTEGVEPVLRTYNTLIIACNMCGQPR 332
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 470
+AM V +++ +S P T+ LI + G +D + +FQ M CE ++ T +
Sbjct: 333 --EAMAVYKRMLDEGYS-PNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYS 389
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
+++ + + A ELF E ++G+G P+ TY+S++ A A QW
Sbjct: 390 SLISACEKAGQWELALELFNE-----------MAGEGC--IPNTVTYNSLITACAQGAQW 436
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
E V++ M GC D L+ + G+ A++ + P + F
Sbjct: 437 EKASEVFEQMQKGGCTPDVVTFTALISSYEKGGQWRRALGAYEQMRLQRCKPDAIVF--- 493
Query: 591 LIQAIVQSNYEKAVALINAMAYAPF-------HITERQW 622
AI+ + +E V A A F H +++W
Sbjct: 494 --NAIIDTLWETGVIWAQRKALALFQQAVEDGHFKQQRW 530
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 24/186 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G W Q + VL + + L++ Y L+ G+P EA+ ++ ML
Sbjct: 286 LIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRT---YNTLIIACNMCGQPREAMAVYKRML 342
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK---------NW 306
++ P+ Y+++ G+ G L +++++ + M K +R + W
Sbjct: 343 DE-GYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQW 401
Query: 307 DPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ LE P+ V YN+++ AC QW+ VF+Q++K G P T+
Sbjct: 402 ELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGGCTPDVVTFTAL 461
Query: 356 MESYRR 361
+ SY +
Sbjct: 462 ISSYEK 467
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 177/451 (39%), Gaps = 68/451 (15%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGL------KDKRDLKSRF-----VYTKLLAILGKAGR 243
KL + +KG A++ V L D R+L RF VY L+ + K GR
Sbjct: 200 KLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGR 259
Query: 244 PHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR 303
A+++ M+++ + P++ +Y + +L G ++ L +M + N+H
Sbjct: 260 IEVAIKLLGEMMDN-GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCD--ANIH- 315
Query: 304 KNWDPVL------------------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ P++ EP++V YN +++ + + V Q
Sbjct: 316 -TFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQ 374
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+++SG P+ TY +L+ F + G + A M G Y
Sbjct: 375 MQRSGCLPNVTTY------------SILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 422
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
+ LC N + A +VEK+ +L P ITF I G ++ + + + M+
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKM-TLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQ 481
Query: 460 DH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
H C PNI T N +L R + + +A LF+E N L+P+ TY+
Sbjct: 482 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN-------------LQPNLVTYN 528
Query: 519 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 578
++L + A ++ + G D + ++ + GK + + +
Sbjct: 529 TVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSM 588
Query: 579 GEI-PHPLFFTEMLIQAIVQSNYEKAVALIN 608
E P + +T ++ A N E+A+A ++
Sbjct: 589 KEWHPDIITYTSLIWGACNWMNIEEAMAFLD 619
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 157/409 (38%), Gaps = 51/409 (12%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC------- 362
L P++ YN +L A + + +F ++ G P A TY + S +
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR 234
Query: 363 -----------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
+ L+ +EG+I A+ + M GV Y + LC +G
Sbjct: 235 ELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGN 294
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 470
+ A + ++ LR TFT LI G + + + +++ M +D CEPN+ N
Sbjct: 295 VELAFALFAQM-FLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYN 353
Query: 471 AMLKVYSRNDMFSKAKELFEETTRA----NSSGYTFL------SGD--GAP--------- 509
++ N +A ++ ++ R+ N + Y+ L SGD GA
Sbjct: 354 TLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH 413
Query: 510 -LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
+P+ TY+ M++ ++ + + M L GC + + G+
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWA 473
Query: 569 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL---INAMAYAPFHITERQWTEL 625
+ + G +P+ + E+L + YE+A L I A P +T T L
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN--TVL 531
Query: 626 FESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKER 674
+ + + + L+ AL A S IT + + +HA C+ K +
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDS-ITYNTM---IHAYCKQGKVK 576
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 126/302 (41%), Gaps = 37/302 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL GS +A+ V D ++ L + Y+ L+ K+G A +N M+
Sbjct: 355 LIHGLCSNGSLEEALQVCDQ---MQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS-----------KRIKNMHRK 304
P++ Y + L + + + L+E+M + K + R
Sbjct: 412 SH-GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRV 470
Query: 305 NWD-PVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
W +LE P++ YN +L+A ++++ F +F+++ L+P+ TY
Sbjct: 471 EWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTV 530
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+ + R G + EA+ RG + Y + C G+ + A
Sbjct: 531 LYGFSR------------AGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIA 578
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLK 474
+VE++ S++ P IT+T LI + + +I++ ++ + + PN T NA+++
Sbjct: 579 AQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR 638
Query: 475 VY 476
+
Sbjct: 639 CF 640
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 134/326 (41%), Gaps = 45/326 (13%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+P + +YN +L+A + ++++ + ++ ++K GL P+ TY +L++A
Sbjct: 141 KPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY------------NILLKA 188
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ +++ A M +G A Y + LC G+ DA + + KP
Sbjct: 189 LCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF------KP 242
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT----VNAMLKVYSRNDMFSKA 485
+ LI G I+ I + M D+ +PN+ + +N++ + F+
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF 302
Query: 486 KELFEETTRANSSGYT------FLSG--------------DGAPLKPDEYTYSSMLEASA 525
++F AN +T F+ G DG +P+ Y++++
Sbjct: 303 AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGC--EPNVVAYNTLIHGLC 360
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+ E V M SGC + T ++ L+ +++G ++ ++ G P+ +
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMA 611
+T M+ S +++A +L+ M
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMT 446
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 152/384 (39%), Gaps = 33/384 (8%)
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+ L++ + R+R +R ++ + D P + +N +++ + VF ++
Sbjct: 215 ENLLRRVVRLRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEI 274
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
K GL+P+ ++ L+ + G + E ME GV +
Sbjct: 275 PKRGLRPTVVSF------------NTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFS 322
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-K 459
L LC GR + L+ +++ R P +TFT LI GG +D + FQ M
Sbjct: 323 ALINGLCKEGRLDEGSLLFDEMCG-RGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLA 381
Query: 460 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
P++ T NA++ + +A+ L E T +SG LKPD+ T+++
Sbjct: 382 QGVRPDLVTYNALINGLCKVGDLKEARRLVNEMT---ASG----------LKPDKITFTT 428
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 579
+++ E + + M G +LD L+ R G+ H +L AG
Sbjct: 429 LIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAG 488
Query: 580 EIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRISRD 636
P +T ++ + + + L+ M + P +T + L +
Sbjct: 489 FKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVT---YNALMNGLCKQGQMK 545
Query: 637 KLEKLLNALCNCNAASSEITVSNL 660
+ LL+A+ N A ++IT + L
Sbjct: 546 NAKMLLDAMLNVGVAPNDITYNIL 569
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/352 (17%), Positives = 138/352 (39%), Gaps = 39/352 (11%)
Query: 147 PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
P++ R + L+ + + ++ +M G+ L+ GL +G
Sbjct: 275 PKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRL 334
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+ + D + G + + + +T L+ K G+ AL+ F +ML + PD+
Sbjct: 335 DEGSLLFDEMCG---RGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQ-GVRPDLVT 390
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y+++ L +VG LKE +L+ M L+PD + + +++ C
Sbjct: 391 YNALINGLCKVGDLKEARRLVNEMTASG---------------LKPDKITFTTLIDGCCK 435
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRN 386
+ + +++ + G++ + L+ EG++++A + +
Sbjct: 436 DGDMESALEIKRRMVEEGIELDDVAF------------TALISGLCREGRVHDAGRMLTD 483
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
M G Y + C C G + ++++++S H P +T+ L+ G
Sbjct: 484 MLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHV-PGVVTYNALMNGLCKQG 542
Query: 447 HIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRN------DMFSKAKELFEE 491
+ + + M + PN T N +L +S++ D+F+ K L +
Sbjct: 543 QMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDIFNSEKGLVTD 594
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/510 (20%), Positives = 208/510 (40%), Gaps = 63/510 (12%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
+A+A L++ + + ++ + M + ++ + ++KG+ G A +++
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+ + ++ +YT L+ + R +A+R+ M E + PDI Y+S+ +
Sbjct: 441 KEMIASGCRPNV---VIYTTLIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSLIIG 496
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
L + + E + M + L+P+ Y A ++ + + ++
Sbjct: 497 LSKAKRMDEARSFLVEMVENG---------------LKPNAFTYGAFISGYIEASEFASA 541
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
K++R+ G+ P+ + L L+ + ++GK+ EA +A R+M +G++
Sbjct: 542 DKYVKEMRECGVLPN------------KVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
G A Y L L N + DA + +++ + P ++ LI G++ S
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRG-KGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 454 IFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT----RANSSGYTFL----- 503
IF M ++ PN+ N +L + R+ KAKEL +E + N+ Y +
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708
Query: 504 -SGDGA------------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
SGD A L PD + Y+++++ + E ++ G GC
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTA 767
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEA-----GEIPHPLFFTEMLIQAIVQSNYEKAVA 605
L+ + GK L + L++ G+ P+ + + M+ + N E A
Sbjct: 768 PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK-PNDVTYNIMIDYLCKEGNLEAAKE 826
Query: 606 LINAMAYAPFHITERQWTELFESNEDRISR 635
L + M A T +T L + D++ R
Sbjct: 827 LFHQMQNANLMPTVITYTSLL-NGYDKMGR 855
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/275 (18%), Positives = 109/275 (39%), Gaps = 31/275 (11%)
Query: 322 NACVPSHQWKGVF----WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
+ C+ +GV +F + SGL P A Y +E Y R E +
Sbjct: 351 DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR------------EKNV 398
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+ + M++R +V + Y + +C++G A +V+++ + +P + +T
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA-SGCRPNVVIYTT 457
Query: 438 LIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
LI + + D + + + MK+ P+I N+++ S+ +A+ E
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
LKP+ +TY + + A ++ + K M G ++ L+
Sbjct: 518 -------------LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
E + GK A+ S+++ G + +T ++
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/510 (20%), Positives = 208/510 (40%), Gaps = 63/510 (12%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
+A+A L++ + + ++ + M + ++ + ++KG+ G A +++
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+ + ++ +YT L+ + R +A+R+ M E + PDI Y+S+ +
Sbjct: 441 KEMIASGCRPNV---VIYTTLIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSLIIG 496
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
L + + E + M + L+P+ Y A ++ + + ++
Sbjct: 497 LSKAKRMDEARSFLVEMVENG---------------LKPNAFTYGAFISGYIEASEFASA 541
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
K++R+ G+ P+ + L L+ + ++GK+ EA +A R+M +G++
Sbjct: 542 DKYVKEMRECGVLPN------------KVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
G A Y L L N + DA + +++ + P ++ LI G++ S
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRG-KGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 454 IFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT----RANSSGYTFL----- 503
IF M ++ PN+ N +L + R+ KAKEL +E + N+ Y +
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708
Query: 504 -SGDGAP------------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
SGD A L PD + Y+++++ + E ++ G GC
Sbjct: 709 KSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTA 767
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEA-----GEIPHPLFFTEMLIQAIVQSNYEKAVA 605
L+ + GK L + L++ G+ P+ + + M+ + N E A
Sbjct: 768 PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK-PNDVTYNIMIDYLCKEGNLEAAKE 826
Query: 606 LINAMAYAPFHITERQWTELFESNEDRISR 635
L + M A T +T L + D++ R
Sbjct: 827 LFHQMQNANLMPTVITYTSLL-NGYDKMGR 855
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/275 (18%), Positives = 109/275 (39%), Gaps = 31/275 (11%)
Query: 322 NACVPSHQWKGVF----WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
+ C+ +GV +F + SGL P A Y +E Y R E +
Sbjct: 351 DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR------------EKNV 398
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+ + M++R +V + Y + +C++G A +V+++ + +P + +T
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA-SGCRPNVVIYTT 457
Query: 438 LIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
LI + + D + + + MK+ P+I N+++ S+ +A+ E
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
LKP+ +TY + + A ++ + K M G ++ L+
Sbjct: 518 -------------LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
E + GK A+ S+++ G + +T ++
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 160/376 (42%), Gaps = 46/376 (12%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M +SG++ E L+ G+ W A VL ++ + +V++++LA
Sbjct: 367 MERSGVLPNEQTYSLLIDAYGNAERWESARIVLK---EMEASNVQPNAYVFSRILASYRD 423
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G + ++ M ED + PD Y+ + T G+ L + +RM +
Sbjct: 424 KGEWQKTFQVLREM-EDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEG------ 476
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+EPD + +N +++ + + +F+++ + G P T+
Sbjct: 477 ---------IEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFN------- 520
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
+++ +F ++ + ++ + NM +G++ A Y L +GR+ DA+ ++
Sbjct: 521 -----IMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLD 575
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 479
+K+ KP + L+ + G D +S F M+D +P++ +N+++ + ++
Sbjct: 576 DMKA-AGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKD 634
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
+A + + + LKPD TY+++++A +++ VY+
Sbjct: 635 RRDVEAFVVLQYMKEND-------------LKPDVVTYTTLMKALILVEKFDKVPSVYEE 681
Query: 540 MALSGCQLDQTKHAWL 555
M LSGC D+ A L
Sbjct: 682 MILSGCTPDRKARAML 697
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 150/387 (38%), Gaps = 44/387 (11%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
R S+L +Y D+ L+ ++ ++ KAG +AL + ++ L A
Sbjct: 249 RANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGV-VQGSGLSVKTA 307
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
+V LG G +E + E MR D L+P YNA+L V
Sbjct: 308 TLVTVIWGLGNCGRTEEAEAIFEEMR---------------DNGLQPRTRAYNALLRGYV 352
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
+ + +V ++ +SG+ P+ TY L +++Y WE +I ++
Sbjct: 353 KAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNA-------ERWESARI-----VLK 400
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
ME V A V+ + + G WQ V+ +++ +P I + LI +
Sbjct: 401 EMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMED-SGVRPDRIFYNVLIDTFGKF 459
Query: 446 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+D ++ F M + EP+ T N ++ + + +A+ELFEE GY
Sbjct: 460 NCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMME---KGYL--- 513
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
P T++ M+ + +W+ + + M G + + L+ ++G+
Sbjct: 514 -------PCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGR 566
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEML 591
D + AG P + +L
Sbjct: 567 FDDAIECLDDMKAAGLKPSSTMYNALL 593
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/332 (18%), Positives = 130/332 (39%), Gaps = 31/332 (9%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+ YNA+++AC ++ + + ++R+ G Y L ++R+ +
Sbjct: 200 LTYNALISACARNNDIEKALNLICRMREDGYPSDLVNYSL------------IIRSLMKN 247
Query: 375 GKINEAV--AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
+ N ++ R +++ + ++ ++ G A+ + ++ S
Sbjct: 248 NRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVK-T 306
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
T +I + G ++ +IF+ M+D+ +P NA+L+ Y + + A+ + E
Sbjct: 307 ATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSE 366
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
R+ + P+E TYS +++A A +WE V K M S Q +
Sbjct: 367 MERSG-------------VLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYV 413
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAM 610
+ +L G+ + ++G P +F+ +LI + N + A+A + M
Sbjct: 414 FSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYN-VLIDTFGKFNCLDHAMATFDRM 472
Query: 611 AYAPFHITERQWTELFESNEDRISRDKLEKLL 642
W L + + D+ E+L
Sbjct: 473 LSEGIEPDTITWNTLVDCHCKAGKHDRAEELF 504
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 159/378 (42%), Gaps = 50/378 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAIL 238
M+Q G+ E L+ G W A +L + G+K S +V++++LA
Sbjct: 318 MSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK-----PSSYVFSRILAGF 372
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
G +A + M + PD Y+ + T G+ L + +RMR++
Sbjct: 373 RDRGEWQKAFAVLREM-HASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEG---- 427
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
+EPD+V +N +++A + +F ++R+S TY
Sbjct: 428 -----------IEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTY------ 470
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
+++ EE + A + M+++G+V Y L +GR+++A+
Sbjct: 471 ------NIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDC 524
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYS 477
+E +K+ KP + L+ + G D +++ + M+ D E + +N+++ +
Sbjct: 525 IEAMKA-DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFG 583
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+ ++A + + F+ +G L+PD TY+++++A Q+E +Y
Sbjct: 584 EDRRIAEAFSVLQ-----------FMKENG--LRPDVITYTTLMKALIRVEQFEKVPVIY 630
Query: 538 KGMALSGCQLDQTKHAWL 555
+ M SGC D+ A L
Sbjct: 631 EEMITSGCAPDRKARAML 648
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 124/312 (39%), Gaps = 47/312 (15%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++P YNA+L V K V ++ + G+ P ATY L +++Y R
Sbjct: 288 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRA------- 340
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK-----IKS 424
WE +I ++ ME GV ++ V+ + + G WQ A V+ + ++
Sbjct: 341 GRWESARI-----LLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRP 395
Query: 425 LRHSKPLEITFTGLIISSMDG----GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 479
RH F ++I + GH D F M++ EP++ T N ++ + +
Sbjct: 396 DRH-------FYNVMIDTFGKYNCLGHAMDA---FDRMREEGIEPDVVTWNTLIDAHCKG 445
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
+A ELF+E +N PL TY+ M+ +WE E +
Sbjct: 446 GRHDRAIELFDEMRESN-----------CPL--GTTTYNIMINLLGEEQRWEGVEAMLAE 492
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
M G + + L+ R+G+ +++ G P P + L+ A Q
Sbjct: 493 MKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMY-HALVNAYAQRG 551
Query: 600 Y-EKAVALINAM 610
+ A+ ++ AM
Sbjct: 552 LADHALNVVKAM 563
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 121/293 (41%), Gaps = 39/293 (13%)
Query: 303 RKNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
RK WD ++ +PD++ YN ++ A +K + QL ++ P+
Sbjct: 132 RKQWDSIISICRWILLRSSFKPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTED 191
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY L L++A+ G + +A A M G+ +A VY L G
Sbjct: 192 TYAL------------LIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGG 239
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
A + +++K KP T+T LI G + +F M H C+PNI T
Sbjct: 240 NSDKAEEIFKRMKK-DACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTY 298
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
A++ ++R + KA+E+FE+ A L+PD Y Y++++EA + A
Sbjct: 299 TALVNAFAREGLCEKAEEVFEQMQEAG-------------LEPDVYAYNALMEAYSRAGY 345
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
++ M GC+ D+ + L+ +AG E F + G P
Sbjct: 346 PYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITP 398
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 140/339 (41%), Gaps = 62/339 (18%)
Query: 230 VYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
YT L+ + GKAG+ AL++F+ +M DC P+I Y ++ + GL ++ ++ E
Sbjct: 262 TYTMLINLYGKAGKSFMALKLFHEMMSHDCK--PNICTYTALVNAFAREGLCEKAEEVFE 319
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M++ LEPD+ YNA++ A + G +F ++ G +P
Sbjct: 320 QMQEAG---------------LEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPD 364
Query: 349 AATYGLAMESYRRCLLK-----------------------VLVRAFWEEGKINEAVAAVR 385
A+Y + +++Y + + VL+ A+ + G +N+ +
Sbjct: 365 RASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILN 424
Query: 386 NMEQRGVVGTASVY---YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 442
M + G+ V L L G+ ++ + V+EK + T+ LI
Sbjct: 425 QMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADIS----TYNILINRY 480
Query: 443 MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
G I+ +FQ + +P++ T + + YS+ ++ K E+FEE
Sbjct: 481 GQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEE---------- 530
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
+ DG PD T +L A + Q E V + M
Sbjct: 531 -MIDDGC--YPDGGTAKVLLAACSNEDQTEQVTTVIRTM 566
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 109/298 (36%), Gaps = 38/298 (12%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR------------- 361
VVYNA +N + +FK+++K KP+ TY + + Y +
Sbjct: 226 VVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHE 285
Query: 362 ----------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
C LV AF EG +A M++ G+ Y L G
Sbjct: 286 MMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGY 345
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 470
A + ++ + +P ++ L+ + G DD ++F+ MK P + +
Sbjct: 346 PYGAAEIFSLMQHM-GCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHM 404
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
+L YS+ +K +E+ + ++ LK D Y +SML Q+
Sbjct: 405 VLLSAYSKMGSVNKCEEILNQMCKSG-------------LKLDTYVLNSMLNLYGRLGQF 451
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
E V + M D + + L+ +AG +E F L G P + +T
Sbjct: 452 GKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWT 509
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 50/263 (19%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y L+ +AG P+ A IF+LM + PD A+Y+ + G+ G
Sbjct: 331 YAYNALMEAYSRAGYPYGAAEIFSLM-QHMGCEPDRASYNILVDAYGKAGF--------- 380
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAV-----LNACVPSHQWKGVFWVFKQLRKS 343
+ K+M R P ++ +V+ +A +N C + Q+ KS
Sbjct: 381 --QDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEE---------ILNQMCKS 429
Query: 344 GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
GLK +++Y +L ++ + G+ + +R ME+ V S Y L
Sbjct: 430 GLK---------LDTY---VLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILI 477
Query: 404 CCLCNNGRWQDAMLV--VEKIKSLRHSKPLE---ITFTGLIISSMDGGHIDDCISIFQHM 458
R+ A + +E + L SK L+ +T+T I + C+ IF+ M
Sbjct: 478 ------NRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEM 531
Query: 459 -KDHCEPNIGTVNAMLKVYSRND 480
D C P+ GT +L S D
Sbjct: 532 IDDGCYPDGGTAKVLLAACSNED 554
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 106/491 (21%), Positives = 190/491 (38%), Gaps = 100/491 (20%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R +A A L+ L + T+ V R M Q G + LLKGL D+
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
++A+ +L + D D V YT ++ K G +A ++ ML D + P++
Sbjct: 179 QEALELLQMMP--DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML-DRGILPNVV 235
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQ---------------------KPSKRIKNMHRK 304
Y+S+ L + + + ++++ M + +P + I + +
Sbjct: 236 TYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY----- 359
+ D V EPD+V YN++++ + + +F + K GLKP TYG ++ Y
Sbjct: 296 HSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 360 ---RRCLLKVLVR---------------AFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
LL ++VR A+ ++GK+++A+ M Q+G+ Y
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG----------------LIISSMDG 445
+ LC +GR +DAM E++ R S P I + LI+ +D
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLS-PGNIVYNSLIHSLCIFDKWDKAKELILEMLDR 473
Query: 446 GHIDDCISIFQHMKDHC--------------------EPNIGTVNAMLKVYSRNDMFSKA 485
G D I + HC +PNI T + ++ Y +A
Sbjct: 474 GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEA 533
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+L +KPD TY++++ + E +++ M SG
Sbjct: 534 TKLLASMVSVG-------------MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580
Query: 546 QLDQTKHAWLL 556
D + +L
Sbjct: 581 SPDIITYNIIL 591
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 169/426 (39%), Gaps = 102/426 (23%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--G 218
L+D L + + K M + GL LL+G KG+ + +LD + G
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ + +V++ L+ K G+ +A+ +F+ M + L PD Y +V L + G
Sbjct: 370 IH-----PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ-GLNPDTVTYGTVIGILCKSG 423
Query: 279 LLKELVKLIERM---RQKPSKRIKN--MHR----KNWDP-------VLEPDLVVYNAVLN 322
+++ ++ E+M R P + N +H WD +L+ + + N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483
Query: 323 ACVPSHQWKGVFW----VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKIN 378
+ + SH +G +F + + G+KP+ TY ++ Y CL GK++
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGY--CL----------AGKMD 531
Query: 379 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS-------------- 424
EA + +M G+ Y L C R +DA+++ +++S
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591
Query: 425 -------------------LRHSKPLEITFTGLIISSMDGGHI-DDCISIFQHMKDHCEP 464
LE++ +I+ + ++ D+ + +FQ++ C
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL---CLT 648
Query: 465 NIG--------TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
++ + A+LKV RND +AK+LF LS +G L PD T
Sbjct: 649 DLQLETRTFNIMIGALLKV-GRND---EAKDLFAA-----------LSANG--LVPDVRT 691
Query: 517 YSSMLE 522
YS M E
Sbjct: 692 YSLMAE 697
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 188/457 (41%), Gaps = 67/457 (14%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R +A A L+ L + T+ V R M Q G + LLKGL D+
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
++A+ +L + D D V YT ++ K G +A ++ ML D + P++
Sbjct: 179 QEALELLQMMP--DDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML-DRGILPNVV 235
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQ---------------------KPSKRIKNMHRK 304
Y S+ L + + + ++++ M + +P + I + +
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY----- 359
+ D V EPD+V YN++++ + + +F + K GLKP TYG ++ Y
Sbjct: 296 HSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 360 ---RRCLLKVLVR---------------AFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
LL ++VR A+ ++GK+++A+ M Q+G+ Y
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 461
+ LC +GR +DAM E++ R S P I + LI S D + M D
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLS-PGNIVYNSLIHSLCIFDKWDKAKELILEMLDR 473
Query: 462 --CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
C I N+++ + + ++++LF+ R +KPD TYS+
Sbjct: 474 GICLDTI-FFNSIIDSHCKEGRVIESEKLFDLMVRIG-------------VKPDIITYST 519
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+++ A + + + M G + D + L+
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 164/423 (38%), Gaps = 63/423 (14%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L + + K + + M ++G+M ++ G G ++A+ L ++
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D+ + Y L+ L K GR EA ++F+ M + L P+I Y ++ G L
Sbjct: 300 VEPDVVT---YNSLMDYLCKNGRCTEARKMFDSMTKR-GLKPEITTYGTLLQGYATKGAL 355
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E+ L++ M + + P+ V++ ++ A + VF ++
Sbjct: 356 VEMHGLLDLMVRNG---------------IHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 341 RKSGLKPSAATYGL-------------AMESYRRCL----------LKVLVRAFWEEGKI 377
R+ GL P TYG AM + + + L+ + K
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR---HSKPLEIT 434
++A + M RG+ + + C GR ++ EK+ L KP IT
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES----EKLFDLMVRIGVKPDIIT 516
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
++ LI G +D+ + M +P+ T N ++ Y + A LF E
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM- 575
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
SSG + PD TY+ +L+ + + +Y G+ SG QL+ + +
Sbjct: 576 --ESSG----------VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 554 WLL 556
+L
Sbjct: 624 IIL 626
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/283 (17%), Positives = 107/283 (37%), Gaps = 29/283 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG--LKPSAATYGLAMESYRRCLLKVLVR 369
P++ YN +L ++ + + + + G P +Y ++
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSY------------TTVIN 207
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
F++EG +++A M RG++ Y + LC AM V+ +
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK-NGVM 266
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+ ++ G + I + M D EP++ T N+++ +N ++A+++
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F+ T+ LKP+ TY ++L+ AT + M +G +
Sbjct: 327 FDSMTKRG-------------LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ ++ GK F + + G P + + ++
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 109/516 (21%), Positives = 197/516 (38%), Gaps = 112/516 (21%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL + A+ +LD + + + D+ Y LL KAG + +R+++ ++
Sbjct: 199 LMCGLAKQDRLDHALDLLDEMPRSRVQPDV---VCYNALLGGCFKAGEFEKVMRVWDKLV 255
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+D P++A Y+ + L + G KE+ ++ ERM + N L+PD++
Sbjct: 256 KDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERM-------VANN--------LQPDVI 300
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY----------GLAMESYR----- 360
Y +++ S G V+ ++ K+GL AA Y G E+++
Sbjct: 301 TYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSA 360
Query: 361 -----RCL--LKVLVRAFWEEGKINEAV--------------------AAVRNMEQRGVV 393
R L ++++ ++ G ++EA+ + + Q G
Sbjct: 361 GFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFA 420
Query: 394 GTASVYYE----------------LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
A +E + LCN GR DA+ V EK+ KP +
Sbjct: 421 NKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDK-DGCKPNSHIYNA 479
Query: 438 LIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
LI D + I+ M D+ C P + T N ++ + + + +A + E
Sbjct: 480 LISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE-- 537
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+G+T PD TY S++ + + + ++K + G ++D H L+
Sbjct: 538 -NGFT----------PDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILI 586
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAMAYAPF 615
AGK H F + E P L L+ + ++ Y +KA L
Sbjct: 587 HGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATL--------- 637
Query: 616 HITERQWTELFESN--EDRISRDKLEKLLNALCNCN 649
WT + E D IS + K LC+C+
Sbjct: 638 ------WTSITEDGLEPDIISYNTRIK---GLCSCD 664
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 144/321 (44%), Gaps = 42/321 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++KGL D G +A+ + D + KD + + L+ L + G ++A IF
Sbjct: 374 MIKGLFDSGMVDEAIELWDLLE--KDVACIPDTVTFGTLIHGLCQNGFANKAFTIF---- 427
Query: 256 EDCNLYP---DIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKN--------- 300
E+ + D+ +Y S+ L VG L + VK+ E+M + KP+ I N
Sbjct: 428 EEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQV 487
Query: 301 --------MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
++ K D P ++ YN +++ + +++ V +++ ++G P TY
Sbjct: 488 YRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTY 547
Query: 353 GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
G L+R + + KI++A++ + + +G+ ++ L LC+ G+
Sbjct: 548 G------------SLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 471
+A+ V +K ++ P +T+ L+ + G+ID +++ + +D EP+I + N
Sbjct: 596 DEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNT 655
Query: 472 MLKVYSRNDMFSKAKELFEET 492
+K D + +L +E
Sbjct: 656 RIKGLCSCDRIHEGIQLLDEV 676
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/430 (21%), Positives = 165/430 (38%), Gaps = 59/430 (13%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
KL++ L +G A VL G D+ F Y L+A + G A R+ M
Sbjct: 80 KLIRNLCRRGRTSDAARVLRAAEGSGSPVDV---FAYNTLVAGYCRYGHLDAARRLIGSM 136
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ PD Y + L G + + + L++ M ++ +P++
Sbjct: 137 ----PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGC---------------QPNV 177
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V Y +L A + ++ V ++R G P+ TY V++ E
Sbjct: 178 VTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTY------------NVIINGMCRE 225
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEI 433
G++++A + + G Y L LC + RW D L E ++ ++ P E+
Sbjct: 226 GRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMME--KNCMPNEV 283
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
TF LI GG ++ I + Q M +H C N N ++ + A
Sbjct: 284 TFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDA------- 336
Query: 493 TRANSSGYTFLSGDGA-PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
+ FL+ G+ PD +Y+++L+ A +W + + K M + C ++
Sbjct: 337 -------FKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVT 389
Query: 552 HAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+ + G L+E A + + E G + + ++ VQ + + A+ L
Sbjct: 390 FNTFICILCQKG---LIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFR 446
Query: 609 AMAYAPFHIT 618
+M P IT
Sbjct: 447 SMPCKPNTIT 456
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 96/471 (20%), Positives = 185/471 (39%), Gaps = 76/471 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L++ L D+G A+S+LD + +R + V YT LL + K +A+ + + M
Sbjct: 148 LIRVLCDRGRVADALSLLDDML----RRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEM 203
Query: 255 -LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
+ C P+I Y+ + + + G + + L+ R+ + +PD
Sbjct: 204 RAKGCT--PNIVTYNVIINGMCREGRVDDARDLLNRL---------------FSYGCQPD 246
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR------------ 361
V Y +L S +W V +F ++ + P+ T+ + + + R
Sbjct: 247 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQ 306
Query: 362 ------C-----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
C L +++ + ++G++++A + NM G Y + LC
Sbjct: 307 QMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAE 366
Query: 411 RWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 468
RW DA L+ E +++ + P E+TF I G I+ I + + M++H C + T
Sbjct: 367 RWNDAKELLKEMVRN--NCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVT 424
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
NA++ + A ELF P KP+ TY+++L A
Sbjct: 425 YNALVNGFCVQGHIDSALELFRSM----------------PCKPNTITYTTLLTGLCNAE 468
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPL 585
+ + + M C + L+ + G L+ A + ++E G P+ +
Sbjct: 469 RLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKG---FLDEAIELVEQMMEHGCTPNLI 525
Query: 586 FFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRI 633
+ + + E A+ L++ + +P IT + S EDR+
Sbjct: 526 TYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGIL-SKEDRV 575
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 103/254 (40%), Gaps = 45/254 (17%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT +L L +A R ++A + M+ + N P+ +++ L Q GL+++ + LIE+M
Sbjct: 355 YTTVLKGLCRAERWNDAKELLKEMVRN-NCPPNEVTFNTFICILCQKGLIEQAIMLIEQM 413
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSA 349
++ +V YNA++N CV H + + R KP+
Sbjct: 414 QEHGCTV---------------GVVTYNALVNGFCVQGH----IDSALELFRSMPCKPNT 454
Query: 350 ATYGLAMES------------------YRRC-----LLKVLVRAFWEEGKINEAVAAVRN 386
TY + +R C VLV F ++G ++EA+ V
Sbjct: 455 ITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQ 514
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
M + G Y L + + +DA+ ++ + S + P ITF+ +I
Sbjct: 515 MMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVS-KGVSPDVITFSSIIGILSKED 573
Query: 447 HIDDCISIFQHMKD 460
+++ I +F +D
Sbjct: 574 RVEEAIQMFHLAQD 587
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 159/378 (42%), Gaps = 50/378 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAIL 238
M+Q G+ E L+ G W A +L + G+K S +V++++LA
Sbjct: 318 MSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK-----PSSYVFSRILAGF 372
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
G +A + M + PD Y+ + T G+ L + +RMR++
Sbjct: 373 RDRGEWQKAFAVLREM-HASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEG---- 427
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
+EPD+V +N +++A + +F ++R+S TY
Sbjct: 428 -----------IEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTY------ 470
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
+++ EE + A + M+++G+V Y L +GR+++A+
Sbjct: 471 ------NIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDC 524
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYS 477
+E +K+ KP + L+ + G D +++ + M+ D E + +N+++ +
Sbjct: 525 IEAMKA-DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFG 583
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+ ++A + + F+ +G L+PD TY+++++A Q+E +Y
Sbjct: 584 EDRRIAEAFSVLQ-----------FMKENG--LRPDVITYTTLMKALIRVEQFEKVPVIY 630
Query: 538 KGMALSGCQLDQTKHAWL 555
+ M SGC D+ A L
Sbjct: 631 EEMITSGCAPDRKARAML 648
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 124/312 (39%), Gaps = 47/312 (15%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++P YNA+L V K V ++ + G+ P ATY L +++Y R
Sbjct: 288 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRA------- 340
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK-----IKS 424
WE +I ++ ME GV ++ V+ + + G WQ A V+ + ++
Sbjct: 341 GRWESARI-----LLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRP 395
Query: 425 LRHSKPLEITFTGLIISSMDG----GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 479
RH F ++I + GH D F M++ EP++ T N ++ + +
Sbjct: 396 DRH-------FYNVMIDTFGKYNCLGHAMDA---FDRMREEGIEPDVVTWNTLIDAHCKG 445
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
+A ELF+E +N PL TY+ M+ +WE E +
Sbjct: 446 GRHDRAIELFDEMRESN-----------CPL--GTTTYNIMINLLGEEQRWEGVEAMLAE 492
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
M G + + L+ R+G+ +++ G P P + L+ A Q
Sbjct: 493 MKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMY-HALVNAYAQRG 551
Query: 600 Y-EKAVALINAM 610
+ A+ ++ AM
Sbjct: 552 LADHALNVVKAM 563
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 71/389 (18%), Positives = 148/389 (38%), Gaps = 52/389 (13%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
ALR+ L+ E L PD+A+Y + L L+ + + +
Sbjct: 167 ALRLLGLLREHSFL-PDLASYSHL------------LASLLNTRDPPDAALLDRLLGDLR 213
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP-SAATYGL--AMESYRRC- 362
+ LEPD +++ +++A + + + GL P S A L ++ S RR
Sbjct: 214 ESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVA 273
Query: 363 --------------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
L++ + + G + A + M Q GV + Y L
Sbjct: 274 EAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLL 333
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDH 461
GRW+ A ++++++++ KP F+ ++ D G ++ + M
Sbjct: 334 VDAYTRAGRWESARILLKEMEA-DGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASG 392
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
P+ N M+ + + + A + F+ R G ++PD T+++++
Sbjct: 393 VRPDRHFYNVMIDTFGKYNCLGHAMDAFD---RMREEG----------IEPDVVTWNTLI 439
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
+A + + ++ M S C L T + ++ + +E + E G +
Sbjct: 440 DAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLV 499
Query: 582 PHPLFFTEMLIQAIVQSNYEKAVALINAM 610
P+ + +T ++ +++AV I AM
Sbjct: 500 PNIITYTTLVDVYGRSGRFKEAVDCIEAM 528
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 103/485 (21%), Positives = 187/485 (38%), Gaps = 65/485 (13%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L + K L +G RQ +VL+ ++ + + + Y L+ +L ++G EAL ++
Sbjct: 161 LTIFKALSIRGGLRQMTTVLN---KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRR 217
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQ-------VGLLKELVKLIER-------------MRQK 293
M+ + L P + Y ++ V LG+ + LLKE+ L R R
Sbjct: 218 MVSE-GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAG 276
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ R+ D PDLV Y +++A + Q + +F +++ +G KP Y
Sbjct: 277 KIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYI 336
Query: 354 LAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
++ + +LV + +EA A M ++
Sbjct: 337 TLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQ 396
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
G++ Y L C L GR +DA+ ++ ++S+ +P T+ I G
Sbjct: 397 GILPNLHTYNTLICGLLRAGRIEDALKLLGTMESV-GVQPTAYTYNIFIDYFGKSGETGK 455
Query: 451 CISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
+ F+ MK PNI NA L + +AK +F R N
Sbjct: 456 AVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFN-GLRENG------------ 502
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
L PD TY+ M++ + Q + + M +GC+ D L+ +AG+
Sbjct: 503 LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562
Query: 570 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA---YAPFHITERQWTELF 626
FD + + P + + +L + +KA+ L +M +P I+ + F
Sbjct: 563 QMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCF 622
Query: 627 ESNED 631
N++
Sbjct: 623 CKNDE 627
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 126/318 (39%), Gaps = 53/318 (16%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD ++ + G+ G + EL +L + M S+R K PD + YN V+
Sbjct: 821 PDAFTFNMLLAVHGKSGKITELFELYKEM---ISRRCK------------PDAITYNIVI 865
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC------------------- 362
++ S+ F L S +P+ TYG ++ +
Sbjct: 866 SSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK 925
Query: 363 ----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
+ +L+ + + G A + M G+ Y L CLC GR +A+
Sbjct: 926 PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY 985
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 477
++KS P I + +I +++ ++++ M++ P++ T N+++
Sbjct: 986 FNELKS-TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLG 1044
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
M +AK ++EE A L+PD +TY++++ + + E+ VY
Sbjct: 1045 LAGMVEQAKRMYEELQLAG-------------LEPDVFTYNALIRGYSLSENPEHAYTVY 1091
Query: 538 KGMALSGCQLDQTKHAWL 555
K M + GC + +A L
Sbjct: 1092 KNMMVDGCNPNIGTYAQL 1109
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 144/347 (41%), Gaps = 60/347 (17%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
V L+ L KAGR EA ++F+ M +D L P + Y+++ LG+ G +++ ++L E
Sbjct: 544 VVNSLIDSLYKAGRVDEAWQMFDRM-KDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 602
Query: 290 MRQK---PSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
M +K P+ N M K +PD++ YN V+ + ++
Sbjct: 603 MIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENK 662
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-------------LLKV---LVRAFWE 373
FW F QL+KS + P T + +C + +V + R+FWE
Sbjct: 663 VNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWE 721
Query: 374 --------EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
E ++++A+ + G+ S L LC + R A + +K
Sbjct: 722 DLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKK 781
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSK 484
P ++ LI ++ + + +F+ MK+ C P+ T N +L V+ ++ ++
Sbjct: 782 LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE 841
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
EL++E KPD TY+ ++ + A ++ +
Sbjct: 842 LFELYKEMISRRC-------------KPDAITYNIVISSLAKSNNLD 875
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 105/257 (40%), Gaps = 30/257 (11%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
LD+ Y L + Y L+ L K GR EA+R+F M D P+ A ++ +
Sbjct: 878 LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM-SDYGCKPNCAIFNILIN 936
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
G++G + +L +RM + + PDL Y +++ + +
Sbjct: 937 GYGKIGDTETACQLFKRMVNEG---------------IRPDLKSYTILVDCLCLAGRVDE 981
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+ F +L+ +GL P Y ++ + ++ EA+A M RG+
Sbjct: 982 ALYYFNELKSTGLDPDFIAY------------NRIINGLGKSQRMEEALALYNEMRNRGI 1029
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 452
V Y L L G + A + E+++ L +P T+ LI + +
Sbjct: 1030 VPDLYTYNSLMLNLGLAGMVEQAKRMYEELQ-LAGLEPDVFTYNALIRGYSLSENPEHAY 1088
Query: 453 SIFQHMK-DHCEPNIGT 468
+++++M D C PNIGT
Sbjct: 1089 TVYKNMMVDGCNPNIGT 1105
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 74/178 (41%), Gaps = 24/178 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G G A + + + DLKS YT L+ L AGR EAL FN L
Sbjct: 934 LINGYGKIGDTETACQLFKRMVNEGIRPDLKS---YTILVDCLCLAGRVDEALYYFN-EL 989
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP--------------------S 295
+ L PD AY+ + LG+ ++E + L MR +
Sbjct: 990 KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
++ K M+ + LEPD+ YNA++ S + + V+K + G P+ TY
Sbjct: 1050 EQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYA 1107
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 115/324 (35%), Gaps = 36/324 (11%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ P L YN ++ + H + + +FK ++ G P A T+ + L+
Sbjct: 784 ISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNM------------LLA 831
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+ GKI E + M R A Y + L + A+ + S +
Sbjct: 832 VHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVS-SDFR 890
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+ LI G +++ + +F+ M D+ C+PN N ++ Y + A +L
Sbjct: 891 PTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQL 950
Query: 489 FE----ETTRANSSGYTFLSG------------------DGAPLKPDEYTYSSMLEASAT 526
F+ E R + YT L L PD Y+ ++
Sbjct: 951 FKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGK 1010
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
+ + E +Y M G D + L++ AG + ++ L AG P
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFT 1070
Query: 587 FTEMLIQAIVQSNYEKAVALINAM 610
+ ++ + N E A + M
Sbjct: 1071 YNALIRGYSLSENPEHAYTVYKNM 1094
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 83/210 (39%), Gaps = 23/210 (10%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
+R + +A +++ L++ K F + S T L+ GL G +
Sbjct: 852 RRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEE 911
Query: 209 AMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
AM + + + YG K + ++ L+ GK G A ++F M+ + + PD+ +
Sbjct: 912 AMRLFEEMSDYGCK-----PNCAIFNILINGYGKIGDTETACQLFKRMVNE-GIRPDLKS 965
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y + L G + E + ++ L+PD + YN ++N
Sbjct: 966 YTILVDCLCLAGRVDEALYYFNELKSTG---------------LDPDFIAYNRIINGLGK 1010
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
S + + ++ ++R G+ P TY M
Sbjct: 1011 SQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 151/363 (41%), Gaps = 59/363 (16%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT L+ + R +A+R+ M E + PD Y+S+ + L + + E +
Sbjct: 457 IYTTLIKTFLQKSRFGDAVRVLKEMREQ-GIAPDTFCYNSLIIGLSKAKKMDEARSFLLE 515
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + K PD Y A ++ + + ++ K++ + G+ P+
Sbjct: 516 MVENGFK---------------PDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPN- 559
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+ L L+ + ++GK+ EA +A R+M ++G++G A Y L L N
Sbjct: 560 -----------KVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKN 608
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
G+ DA + +++ + P ++ LI G++ SIF M + N+
Sbjct: 609 GKVNDAEEIFHEMRG-KGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVII 667
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA--- 525
N +L + R+ KAKEL +E +SG G P P+ TY ++++
Sbjct: 668 YNMLLGGFCRSGEIEKAKELLDE-----------MSGKGFP--PNAVTYCTIIDGYCKSG 714
Query: 526 -TAHQWEYFE-----------YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
A ++ F+ +VY + C+L+ + A + E + G C F+
Sbjct: 715 DLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKG-CASSSAPFN 773
Query: 574 SLL 576
+L+
Sbjct: 774 ALI 776
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/407 (20%), Positives = 152/407 (37%), Gaps = 66/407 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L K G+ ++A IF+ M + PD+ +Y ++ ++G +++ + + M
Sbjct: 598 YTVLMNGLVKNGKVNDAEEIFHEM-RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEM 656
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q L ++++YN +L S + + + ++ G P+A
Sbjct: 657 VQAG---------------LTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAV 701
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACCLCN 408
TY ++ Y + G + EA M+ +G+V + VY L CC N
Sbjct: 702 TYCTIIDGY------------CKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLN 749
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-----E 463
+ + + S P F LI G + + + D +
Sbjct: 750 DVERAITIFETNEKGCASSSAP----FNALINWVFKFGKTELTTDMINRLMDGSFDKFGK 805
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN-----------SSGY-----------T 501
PN T N M+ + AKELF +AN +GY
Sbjct: 806 PNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSV 865
Query: 502 FLSGDGAPLKPDEYTYSSMLEA----SATAHQWEYFEYVYKGMAL-SGCQLDQTKHAWLL 556
F A ++PD YS ++ A T + ++ A+ GC+L + LL
Sbjct: 866 FDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALL 925
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
++ G+ + E ++++ IP E++ ++ + SN A
Sbjct: 926 SGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMA 972
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 70/391 (17%), Positives = 145/391 (37%), Gaps = 51/391 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y + ++ K G +A +F+ M+ + P AY S L++ + E+
Sbjct: 352 MYDYFICVMSKEGAMEKAKALFDGMIT-FGVTPGARAYAS---------LIEGFFR--EK 399
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+K + + + ++N V+ P Y + S G + + K++ SG +P+
Sbjct: 400 NVRKGYELLVEIKKRNI--VISP--YTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNV 455
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
Y L++ F ++ + +AV ++ M ++G+ Y L L
Sbjct: 456 VIY------------TTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKA 503
Query: 410 GRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE----P 464
+ +A ++E +++ KP T+ I ++ G S +++K+ E P
Sbjct: 504 KKMDEARSFLLEMVEN--GFKPDAFTYGAFISGYIEAGEF---ASADKYVKEMLECGVIP 558
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
N ++ Y + +A F G D TY+ ++
Sbjct: 559 NKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILG-------------DAKTYTVLMNGL 605
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
+ E ++ M G D + L+ S+ G FD +++AG +
Sbjct: 606 VKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNV 665
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
+ + +L EKA L++ M+ F
Sbjct: 666 IIYNMLLGGFCRSGEIEKAKELLDEMSGKGF 696
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 147/383 (38%), Gaps = 33/383 (8%)
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
+ YNA LNA V +F + P+ TYG +++R +
Sbjct: 37 VFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYG------------IVLRGLCD 84
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE- 432
+ K + A+ +++ME + + T + L CLC NG+ A E K L L+
Sbjct: 85 DAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAY---ELYKRLSDECSLDR 141
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
I++ L ID +++F M+++ P++ T N +L Y R +A L EE
Sbjct: 142 ISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEE 201
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
G+ + PD Y+Y++++ A Q YV + M SGC +
Sbjct: 202 MIEGKK---------GSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVT 252
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
LL GK F+ ++E P + +T ++ +KA M
Sbjct: 253 FNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDML 312
Query: 612 YAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRS- 670
+T L D +K+E L L ++ E V +R + ALC+
Sbjct: 313 RRGVEPNVYTYTALIGGLCD---ANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGG 369
Query: 671 --EKERDLSSSAHFGSQAIDISP 691
E+ L + A GS+ P
Sbjct: 370 QIERATKLFNDA-MGSRTAKCKP 391
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 149/375 (39%), Gaps = 62/375 (16%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y L L KA + AL +F M E+ + P + Y+ + + G +++ + L+
Sbjct: 141 RISYNMLTYGLCKADQIDRALAVFGEMEENA-VVPSLLTYNGLLYGYCRAGRMEQAMTLL 199
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E M + +K D V PD+ YN V++ + Q +V +++ KSG P
Sbjct: 200 EEMIEG---------KKGSDVV--PDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSP 248
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ T+ ++ CL GK++EA A M +R TA Y L
Sbjct: 249 NVVTFNTLLDGL--CL----------TGKLDEANAMFEYMVERNCEPTAVTYTVLITGHA 296
Query: 408 NNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPN 465
R A V+ ++ R +P T+T LI D ++D + I + M EPN
Sbjct: 297 RALRIDKANDYFVDMLR--RGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPN 354
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML---- 521
+ T ++ + +A +LF + + + A KPD Y YS+++
Sbjct: 355 VVTYTRVIGALCKGGQIERATKLFNDAMGSRT----------AKCKPDSYAYSTIVYWLC 404
Query: 522 EASATAHQWEYF-----------EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 570
S +EYF ++YK MA G +L Q E + + L
Sbjct: 405 RQSKFLEAYEYFLRMVESKLVAKPHIYKAMA-DGLELVQ--------ETEKVERVCLEAS 455
Query: 571 AFDSLLEAGEIPHPL 585
A L+ + P PL
Sbjct: 456 AHGIELQQKDAPQPL 470
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 170/434 (39%), Gaps = 78/434 (17%)
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
M TE ++ +L+ + S + A V W +D + + F Y L L K G +
Sbjct: 1 MATEDDVIHVLENIK---SPKLASRVFKWAARQEDFQ--HTVFTYNAYLNALVKGGHGSK 55
Query: 247 ALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM- 301
A +IF+ ML ++C P+I Y V L ++L++ M K P+ I NM
Sbjct: 56 ARKIFDDMLYKEC--LPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNML 113
Query: 302 -----HRKNWDPVLEP----------DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
D E D + YN + + Q VF ++ ++ +
Sbjct: 114 VSCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVV 173
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM--EQRG--VVGTASVYYEL 402
PS TY + Y R G++ +A+ + M ++G VV Y +
Sbjct: 174 PSLLTYNGLLYGYCR------------AGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTV 221
Query: 403 ACCLCNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD- 460
C + A V+ + IKS P +TF L+ G +D+ ++F++M +
Sbjct: 222 ISGFCKARQLPTARYVLRRMIKS--GCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVER 279
Query: 461 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 520
+CEP T ++ ++R KA + F + R ++P+ YTY+++
Sbjct: 280 NCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRG-------------VEPNVYTYTAL 326
Query: 521 LEASATAHQWEYFEYVYKGMALSG---------------CQLDQTKHAWLLVE---ASRA 562
+ A++ E + K M+ +G C+ Q + A L SR
Sbjct: 327 IGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRT 386
Query: 563 GKCHLLEHAFDSLL 576
KC +A+ +++
Sbjct: 387 AKCKPDSYAYSTIV 400
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 118/520 (22%), Positives = 208/520 (40%), Gaps = 82/520 (15%)
Query: 172 AKNWK----FVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRD 224
A NWK + M ++G+ + T +L LK + + +A+S + + G D
Sbjct: 94 AGNWKKALELCKKMTENGVGPDLVTHNIVLSALK---NGAQYSKAISYFEIMKGANVTSD 150
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVA---VTLGQVGLL 280
F ++ L K G+ EA+ +FN M E PD+ Y S+ GQV
Sbjct: 151 ---TFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENC 207
Query: 281 KELVKLIERMRQKPSKRIKN----------MHRKNWDPV-------LEPDLVVYNAVLNA 323
K + L+ KP+ N MHR+ L PD+V Y ++LNA
Sbjct: 208 KAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNA 267
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
S Q + VF +++K+ KP+ +Y L+ A+ G + EAV
Sbjct: 268 YGRSAQPEKAREVFNKMKKNSCKPNKVSY------------NALIDAYGSAGMLKEAVGL 315
Query: 384 VRNMEQRGV-VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE---ITFTGLI 439
+ ME+ G+ S+ LA C GR + + +E I S+ ++ + + I
Sbjct: 316 LHEMEKDGIQPDVVSISTLLAAC----GRCRQ-ITRIETILEAARSRGIDLNTVAYNSGI 370
Query: 440 ISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
S + G + + ++ M++ + +P+ T N ++ S+ ++++ FE+ + S
Sbjct: 371 KSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVS 430
Query: 499 GY----------TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
TF S + PD TY+++++A W+ ++K M ++G D
Sbjct: 431 STKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPD 490
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
A C L AF+ + GE L E + + + N + +I
Sbjct: 491 -------------AIICSSLMEAFN---KGGEPERVLQLMEFMKKKSIPLNQKSYFEIIA 534
Query: 609 AMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNC 648
+ T + E +S+ IS L +LN L C
Sbjct: 535 SCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKC 574
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 112/256 (43%), Gaps = 27/256 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ P YN V+NAC + WK + K++ ++G+ P T+ +++
Sbjct: 77 IPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTH------------NIVLS 124
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
A + ++A++ M+ V + CL G+ +A+ + ++ R
Sbjct: 125 ALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKC 184
Query: 430 PLE-ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
P + +T+T ++ S G +++C +IF M + +PNI N++L Y+ M +A
Sbjct: 185 PPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALA 244
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
+F + +G L+PD +Y+S+L A + Q E V+ M + C+
Sbjct: 245 IFN-----------LIKKNG--LRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKP 291
Query: 548 DQTKHAWLLVEASRAG 563
++ + L+ AG
Sbjct: 292 NKVSYNALIDAYGSAG 307
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/420 (19%), Positives = 177/420 (42%), Gaps = 55/420 (13%)
Query: 148 EKRWRSEAEAIRVL-VDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
++ W+ A RVL + R + A ++N F L++ + GS
Sbjct: 81 QRDWKVSQVAARVLALPRADPHAVDA-------VLNCWAGRFARRNFPLLIREMAFSGSL 133
Query: 207 RQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
A+ V W +K++ + +R +Y ++ + + + +A +F +++ PD
Sbjct: 134 EHAVYVFCW---MKNQENYCARNDIYGMMIQLHARHNQVDQARGLF-FEMQEWRCKPDAD 189
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y+S+ + GL + + +++ M + + P YN V+NAC
Sbjct: 190 IYNSLINAHARAGLWRWAINIMDDMLRA---------------AIPPSRATYNNVVNACG 234
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
+ WK + K++ ++G+ P T+ + + +++ + +A
Sbjct: 235 AAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGF------------QYTKATGYFE 282
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR-HSKPLEITFTGLIISSMD 444
M+ + + CL G+ DA+ ++ ++ R P +T+T +I S
Sbjct: 283 MMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSIIHSYYV 342
Query: 445 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
G +++C ++F M + +PNI + NA+L Y+ + M ++A +F+ L
Sbjct: 343 CGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFK-----------LL 391
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
+G L+PD +Y+++L A + Q E V+ M + C+ ++ + L+ AG
Sbjct: 392 KQNG--LRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAG 449
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 95/474 (20%), Positives = 173/474 (36%), Gaps = 83/474 (17%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F ++ L K G+ +A+ + N M E PD+ Y S+ + G ++ +
Sbjct: 294 FTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVF 353
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ M + K P++V YNA+L A F +FK L+++GL+P
Sbjct: 354 DMMVAEGVK---------------PNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRP 398
Query: 348 SAATYGLAMESYRRCL-----------------------LKVLVRAFWEEGKINEAVAAV 384
+Y + +Y R L+ A+ G EA++ +
Sbjct: 399 DVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLL 458
Query: 385 RNMEQRGV-VGTASVYYELACC-LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 442
ME+ G+ S+ LA C C D +L K + + + + + I S
Sbjct: 459 HEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNI---VAYNSGIGSY 515
Query: 443 MDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE--------TT 493
+ G + + ++ M + P+ T N ++ + ++++ + FE+ T
Sbjct: 516 LSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTK 575
Query: 494 RANSS---GY-----------TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
SS Y TF++ + PD TY++M++A W ++K
Sbjct: 576 EVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKE 635
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
M + D A C L A + + G + L + + +Q N
Sbjct: 636 MEGNAILPD-------------AIICSSLMEALNKGNQYGRV---LQLMKFMHDQCIQLN 679
Query: 600 YEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASS 653
+ +I + + T + E +S+ IS KL LLN L C S
Sbjct: 680 QKAYFEIIASCSMLRDWKTASEIIEHLDSSLPSISVGKLNYLLNFLGKCGKTES 733
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/403 (19%), Positives = 173/403 (42%), Gaps = 47/403 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+ ++ L KAGR A ++F+ M+ + L PD+ +Y+++ +VG L E + + M
Sbjct: 84 FNSMVNGLCKAGRMEGARKVFDEMVRE-GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 142
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q+ L PD+V + ++++A + + + Q+R+ GL+ +
Sbjct: 143 TQRG---------------LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 187
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
T+ L+ F ++G +++A+ AV M + G+ + Y L C G
Sbjct: 188 TF------------TALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 235
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
R A ++ ++++ R KP +T++ +I G++D + Q M K P+ T
Sbjct: 236 RMDLARELIREMEAKR-VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITY 294
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
+++++ + A ELFE + ++PDE+TY+++++
Sbjct: 295 SSLIRGLCEEKRLNDACELFENMLQLG-------------VQPDEFTYTTLIDGHCKEGN 341
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
E ++ M G D ++ L+ S++ + L +P + + +
Sbjct: 342 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKY-D 400
Query: 590 MLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDR 632
L+ ++ ++ VAL+ ++ ++++S DR
Sbjct: 401 ALMLCCSKAEFKSVVALLKGFCMKGLM---KEADKVYQSMLDR 440
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 165/408 (40%), Gaps = 46/408 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L +G +A+ V+ + G + Y L+A +AG A R+ +LM
Sbjct: 16 LVRALCARGRLEEAVGVVGDMRGAGCA---PNAVTYNTLVAAFCRAGELDGAERVVSLMR 72
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ N P++ ++S+ L + G ++ K+ + M ++ L PD+V
Sbjct: 73 EEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG---------------LAPDVV 117
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN +L+ VF ++ + GL P T+ L+ A + G
Sbjct: 118 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTF------------TSLIHATCKAG 165
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ +AVA V M +RG+ + L C G DA+L VE+++ +P + +
Sbjct: 166 NLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC-GIQPSVVCY 224
Query: 436 TGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
LI G +D + + M+ +P++ T + ++ Y + A +L ++ +
Sbjct: 225 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 284
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
+ PD TYSS++ + +++ M G Q D+ +
Sbjct: 285 KG-------------VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 331
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
L+ + G D ++ G +P + ++ +LI + +S K
Sbjct: 332 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS-VLINGLSKSARTK 378
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 26/216 (12%)
Query: 342 KSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
+ G+ P+ TY +LVRA G++ EAV V +M G A Y
Sbjct: 3 RHGVAPNVYTY------------NILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNT 50
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KD 460
L C G A VV ++ ++KP +TF ++ G ++ +F M ++
Sbjct: 51 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 110
Query: 461 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 520
P++ + N +L Y + ++ +F E T+ L PD T++S+
Sbjct: 111 GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG-------------LVPDVVTFTSL 157
Query: 521 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ A+ A E + M G ++++ L+
Sbjct: 158 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALI 193
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 80/206 (38%), Gaps = 14/206 (6%)
Query: 425 LRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMF 482
+RH P T+ L+ + G +++ + + M+ C PN T N ++ + R
Sbjct: 2 VRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGEL 61
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
A+ + ++ KP+ T++SM+ A + E V+ M
Sbjct: 62 DGAERVVSLMREEGNA------------KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR 109
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
G D + LL + G H F + + G +P + FT ++ N E+
Sbjct: 110 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 169
Query: 603 AVALINAMAYAPFHITERQWTELFES 628
AVAL+ M + E +T L +
Sbjct: 170 AVALVAQMRERGLRMNEVTFTALIDG 195
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/403 (19%), Positives = 173/403 (42%), Gaps = 47/403 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+ ++ L KAGR A ++F+ M+ + L PD+ +Y+++ +VG L E + + M
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVRE-GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q+ L PD+V + ++++A + + + Q+R+ GL+ +
Sbjct: 285 TQRG---------------LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 329
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
T+ L+ F ++G +++A+ AV M + G+ + Y L C G
Sbjct: 330 TF------------TALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 377
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
R A ++ ++++ R KP +T++ +I G++D + Q M K P+ T
Sbjct: 378 RMDLARELIREMEAKR-VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITY 436
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
+++++ + A ELFE + ++PDE+TY+++++
Sbjct: 437 SSLIRGLCEEKRLNDACELFENMLQLG-------------VQPDEFTYTTLIDGHCKEGN 483
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
E ++ M G D ++ L+ S++ + L +P + + +
Sbjct: 484 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKY-D 542
Query: 590 MLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDR 632
L+ ++ ++ VAL+ ++ ++++S DR
Sbjct: 543 ALMLCCSKAEFKSVVALLKGFCMKGLM---KEADKVYQSMLDR 582
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 165/408 (40%), Gaps = 46/408 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L +G +A+ V+ + G + Y L+A +AG A R+ +LM
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCA---PNAVTYNTLVAAFCRAGELDGAERVVSLMR 214
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ N P++ ++S+ L + G ++ K+ + M ++ L PD+V
Sbjct: 215 EEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG---------------LAPDVV 259
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN +L+ VF ++ + GL P T+ L+ A + G
Sbjct: 260 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTF------------TSLIHATCKAG 307
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ +AVA V M +RG+ + L C G DA+L VE+++ +P + +
Sbjct: 308 NLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC-GIQPSVVCY 366
Query: 436 TGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
LI G +D + + M+ +P++ T + ++ Y + A +L ++ +
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 426
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
+ PD TYSS++ + +++ M G Q D+ +
Sbjct: 427 KG-------------VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 473
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
L+ + G D ++ G +P + ++ +LI + +S K
Sbjct: 474 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS-VLINGLSKSARTK 520
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 35/250 (14%)
Query: 312 PDLVVYNAVL----NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
P + YNAVL +A +PS + + + G+ P+ TY +L
Sbjct: 116 PSVPAYNAVLLALSDASLPSARR-----FLSSMLRHGVAPNVYTY------------NIL 158
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
VRA G++ EAV V +M G A Y L C G A VV ++ +
Sbjct: 159 VRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGN 218
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
+KP +TF ++ G ++ +F M ++ P++ + N +L Y + ++
Sbjct: 219 AKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESL 278
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
+F E T+ L PD T++S++ A+ A E + M G +
Sbjct: 279 AVFSEMTQRG-------------LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 325
Query: 547 LDQTKHAWLL 556
+++ L+
Sbjct: 326 MNEVTFTALI 335
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 80/206 (38%), Gaps = 14/206 (6%)
Query: 425 LRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMF 482
LRH P T+ L+ + G +++ + + M+ C PN T N ++ + R
Sbjct: 144 LRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGEL 203
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
A+ + ++ KP+ T++SM+ A + E V+ M
Sbjct: 204 DGAERVVSLMREEGNA------------KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR 251
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
G D + LL + G H F + + G +P + FT ++ N E+
Sbjct: 252 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 311
Query: 603 AVALINAMAYAPFHITERQWTELFES 628
AVAL+ M + E +T L +
Sbjct: 312 AVALVAQMRERGLRMNEVTFTALIDG 337
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 168/385 (43%), Gaps = 50/385 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLM 254
L++ + GS + A+ V W +K++ + +R +Y ++ + + + +A +F
Sbjct: 123 LIREIAISGSLKHAVHVFRW---MKNQENYCARNDIYGMMIRLHARHNKVDQARGLF-FE 178
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+++ P+ Y+S+ + G + +++ M++ + P
Sbjct: 179 MQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQR---------------AAIPPSR 223
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
YN V+NAC + WK + K++ ++G+ P T+ +++ AF
Sbjct: 224 TTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITH------------NIVLSAFKNG 271
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEI 433
+ ++A+A M+ V + CL G + +A+ + ++ R + P +
Sbjct: 272 AQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVV 331
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T+T ++ S G ++C ++F M + PNI + NA+L Y+ + M ++A E F+
Sbjct: 332 TYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFK-- 389
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
L +G L+PD +Y+S+L A + Q E V+ M + C+ ++ +
Sbjct: 390 ---------LLKQNG--LRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSY 438
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLE 577
L+ AG +L+ A L E
Sbjct: 439 NALIDAYGSAG---MLKEAISLLHE 460
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/460 (20%), Positives = 172/460 (37%), Gaps = 94/460 (20%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT ++ G+ +F++M+ + + P+I +Y+++ G+ E ++ +
Sbjct: 332 TYTSIMYSYSVCGQAENCKAVFDIMVAE-GVRPNIVSYNALLGAYASHGMHTEALETFKL 390
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
++Q L PD+V Y ++LNA S Q + VF ++RK+ KP+
Sbjct: 391 LKQNG---------------LRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNK 435
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG----VVGTASVYYELACC 405
+Y L+ A+ G + EA++ + MEQ G V+ +++ AC
Sbjct: 436 VSY------------NALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLL--TACG 481
Query: 406 LCNNGRWQDAMLVVEKIKSLR--------------------------------HSKPLEI 433
C D +L K + ++ + KP +
Sbjct: 482 RCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAV 541
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
T+ LI S G + + F+ M D L ++ +++S + +
Sbjct: 542 TYNILISGSCKLGRYVESLKFFEDMLD------------LNIHLTKEVYSSVICSYVKQG 589
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
+ + TF S PD TY+++++A + W ++K M +G Q D
Sbjct: 590 KLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPD----- 644
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 613
A C L A + + G+ L E + Q +Q N + +I++
Sbjct: 645 --------AIVCSSLMEALN---KGGQPERVLQLIEFMKQKKIQLNQKAYFEIISSCTML 693
Query: 614 PFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASS 653
T Q E +S+ IS L +LN L C S
Sbjct: 694 RDWKTASQIIEHLDSSLSSISFGTLNHILNFLGKCGRTES 733
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 115/284 (40%), Gaps = 30/284 (10%)
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
Q +G+F+ ++ R KP+ TY L+ A G+ A+ + +M+
Sbjct: 171 QARGLFFEMQEWR---CKPNTDTY------------NSLIHAHARAGQWCWAINIMDDMQ 215
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
+ + + + Y + G W+ A+ + +K+ P IT ++ + +G
Sbjct: 216 RAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTE-NGVGPDLITHNIVLSAFKNGAQY 274
Query: 449 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
I+ F+ MK P+ T+N ++ + ++ +A ELF ++ +
Sbjct: 275 SKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCH------- 327
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL-VEASRAGKCH 566
PD TY+S++ + + Q E + V+ M G + + + LL AS
Sbjct: 328 ----PDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTE 383
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
LE F L + G P + +T +L + EKA + N M
Sbjct: 384 ALE-TFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEM 426
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/377 (19%), Positives = 162/377 (42%), Gaps = 48/377 (12%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M +SG+ E L+ G+ G W A VL ++ + +V++++L+
Sbjct: 366 MERSGVSPNEQTYSFLIDAYGNAGRWESARIVLK---EMEASNVQPNAYVFSRILSSYRD 422
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G ++ ++ M E+ + PD Y+ + T G+ L + +RM +
Sbjct: 423 KGEWQKSFQVLREM-ENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEG------ 475
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+EPD V +N +++ + + +F+++ + G P T+
Sbjct: 476 ---------IEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTF-------- 518
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
+++ +F ++ + ++ + +M +G+V + Y L +GR+ DA+ ++
Sbjct: 519 ----NIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLD 574
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRN 479
+K+ KP + LI + G + +S F+ M+ D +P++ +N+++ + +
Sbjct: 575 DMKA-AGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGED 633
Query: 480 DMFSKAKELFEETTRANSSGYTFLS-GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
R ++ +T L LKPD TY+++++A +++ VY+
Sbjct: 634 --------------RRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSVYE 679
Query: 539 GMALSGCQLDQTKHAWL 555
M LSGC D+ A L
Sbjct: 680 EMILSGCTPDRKARAML 696
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 149/379 (39%), Gaps = 45/379 (11%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
++ KAG +AL + ++ L A +V LG G E + E MR
Sbjct: 276 IIVGFAKAGDLSKALEFLGV-VQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMR-- 332
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
D L+P YNA+L V + K +V ++ +SG+ P+ TY
Sbjct: 333 -------------DNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYS 379
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
+++Y WE +I ++ ME V A V+ + + G WQ
Sbjct: 380 FLIDAYGNA-------GRWESARI-----VLKEMEASNVQPNAYVFSRILSSYRDKGEWQ 427
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAM 472
+ V+ ++++ +P + + +I + +D ++ F M + EP+ T N +
Sbjct: 428 KSFQVLREMEN-SGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTL 486
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
+ + R +A+ELFEE GY+ P T++ M+ + +W+
Sbjct: 487 IDCHCRAGKHDRAEELFEEMMEG---GYS----------PCNTTFNIMINSFGDQERWDD 533
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 592
+ + M G + + L+ ++G+ + D + AG P + LI
Sbjct: 534 VKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNA-LI 592
Query: 593 QAIVQSNY-EKAVALINAM 610
A Q E+AV+ AM
Sbjct: 593 NAYAQRGLSEQAVSAFRAM 611
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/391 (18%), Positives = 154/391 (39%), Gaps = 58/391 (14%)
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
R+N P+ YNA+++AC ++ + + ++R+ G Y L + S R
Sbjct: 192 QRQNLTPL------TYNALISACARNNDLEKALNLITRMRQDGYPSDFVNYSLIIRSLMR 245
Query: 362 ------CLLKVLVR-------------------AFWEEGKINEAVAAVRNMEQRGVVGTA 396
+L+ L R F + G +++A+ + ++ G+
Sbjct: 246 KNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVKT 305
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
+ + L N GR +A + E+++ KP + L+ + G + D +
Sbjct: 306 ATLVAVIWALGNCGRTVEAEAIFEEMRD-NGLKPRTRAYNALLRGYVKAGLLKDAEFVVS 364
Query: 457 HM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
M + PN T + ++ Y + A+ + +E +N ++P+ Y
Sbjct: 365 EMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASN-------------VQPNAY 411
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---F 572
+S +L + +W+ V + M SG + D+ + ++ GK + L+HA F
Sbjct: 412 VFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMI---DTFGKFNCLDHAMATF 468
Query: 573 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESN 629
D +L G P + + ++ +++A L M Y+P + T + + S
Sbjct: 469 DRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTT---FNIMINSF 525
Query: 630 EDRISRDKLEKLLNALCNCNAASSEITVSNL 660
D+ D ++ LL + + + +T + L
Sbjct: 526 GDQERWDDVKNLLAHMRSQGLVPNSVTYTTL 556
>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/453 (20%), Positives = 175/453 (38%), Gaps = 81/453 (17%)
Query: 205 SWRQAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
SW+ A+S+ W L+ +++ + + Y +L +L + + + +I M+ + + PD
Sbjct: 22 SWKVALSLFKW---LQAEQNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDMI-NAGIRPD 77
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
Y ++ + + +RM D PD V Y+ +++
Sbjct: 78 NITYSTLISCANRCNYQDAAMAWFDRMH---------------DAQCVPDAVTYSTMIDV 122
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
++ +++ ++KSG KP TYG +VR F G I+ AV+
Sbjct: 123 YGKVGKYDEAVALYESVKKSGWKPDKVTYG------------TMVRLFGRAGYISAAVSI 170
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 443
M+ G+ + VY + CL GR A+ V +++K KP +T + ++
Sbjct: 171 FDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQ-AGVKPNAVTLSTVMEIYS 229
Query: 444 DGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
G + + + IF HM+ +I NA++K+ + +A++ E
Sbjct: 230 RSGKVMEGLGIFHHMRQDLACDIIVYNAVIKMCREAGLVPEAEQYLREMVEYGH------ 283
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
+P+++TY +M+ Y GMA VEA R
Sbjct: 284 -------QPNDWTYRNMISL-----------YAKNGMA---------------VEAQRM- 309
Query: 564 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 623
F L+EAG P + +T +L +YEK +++ M A ER W
Sbjct: 310 --------FSQLVEAGYQPDVMSYTSLLQGYGNAKDYEKVQEILHEMVSANCAPDERLWC 361
Query: 624 ELFESNEDRISRDKLEKLLNALCNCNAASSEIT 656
+ + + + E L + L CN I
Sbjct: 362 VILNLLDACDTDVEFEILRSCLRMCNPTMDNIV 394
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 164/382 (42%), Gaps = 44/382 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+ ++ L KAGR A ++F+ M+ + L PD+ +Y+++ +VG L E + + M
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVRE-GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM 284
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q+ L PD+V + ++++A + + + Q+R+ GL+ +
Sbjct: 285 TQRG---------------LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 329
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
T+ L+ F ++G +++A+ AV M + G+ + Y L C G
Sbjct: 330 TF------------TALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 377
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
R A ++ ++++ R KP +T++ +I G++D + Q M K P+ T
Sbjct: 378 RMDLARELIREMEAKR-VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITY 436
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
+++++ + A ELFE + ++PDE+TY+++++
Sbjct: 437 SSLIRGLCEEKRLNDACELFENMLQLG-------------VQPDEFTYTTLIDGHCKEGN 483
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
E ++ M G D ++ L+ S++ + L +P + + +
Sbjct: 484 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKY-D 542
Query: 590 MLIQAIVQSNYEKAVALINAMA 611
L+ ++ ++ VAL+
Sbjct: 543 ALMLCCSKAEFKSVVALLKGFC 564
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 165/408 (40%), Gaps = 46/408 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L +G +A+ V V ++ + Y L+A +AG A R+ +LM
Sbjct: 158 LVRALCARGRLEEAVGV---VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR 214
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ N P++ ++S+ L + G ++ K+ + M ++ L PD+V
Sbjct: 215 EEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG---------------LAPDVV 259
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN +L+ VF ++ + GL P T+ L+ A + G
Sbjct: 260 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTF------------TSLIHATCKAG 307
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ +AVA V M +RG+ + L C G DA+L VE+++ +P + +
Sbjct: 308 NLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC-GIQPSVVCY 366
Query: 436 TGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
LI G +D + + M+ +P++ T + ++ Y + A +L ++ +
Sbjct: 367 NALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLK 426
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
+ PD TYSS++ + +++ M G Q D+ +
Sbjct: 427 KG-------------VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 473
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
L+ + G D ++ G +P + ++ +LI + +S K
Sbjct: 474 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS-VLINGLSKSARTK 520
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 35/225 (15%)
Query: 312 PDLVVYNAVL----NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
P + YNAVL +A +PS + + + G+ P+ TY +L
Sbjct: 116 PSVPAYNAVLLALSDASLPSARR-----FLSSMLRHGVAPNVYTY------------NIL 158
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
VRA G++ EAV V +M G A Y L C G A VV ++ +
Sbjct: 159 VRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGN 218
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
+KP +TF ++ G ++ +F M ++ P++ + N +L Y + ++
Sbjct: 219 AKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESL 278
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
+F E T+ L PD T++S++ A+ A E
Sbjct: 279 AVFSEMTQRG-------------LVPDVVTFTSLIHATCKAGNLE 310
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 80/206 (38%), Gaps = 14/206 (6%)
Query: 425 LRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMF 482
LRH P T+ L+ + G +++ + + M+ C PN T N ++ + R
Sbjct: 144 LRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGEL 203
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
A+ + ++ KP+ T++SM+ A + E V+ M
Sbjct: 204 DGAERVVSLMREEGNA------------KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVR 251
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
G D + LL + G H F + + G +P + FT ++ N E+
Sbjct: 252 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQ 311
Query: 603 AVALINAMAYAPFHITERQWTELFES 628
AVAL+ M + E +T L +
Sbjct: 312 AVALVAQMRERGLRMNEVTFTALIDG 337
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 195/459 (42%), Gaps = 66/459 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL GL G R A+ +L + +D+ + +Y ++ L K +EA +++ M
Sbjct: 121 LLNGLCKIGETRCAVKLLRMI---EDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM- 176
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ ++PD Y ++ +G L L++ M +KN++ P +
Sbjct: 177 DARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMI------LKNIN---------PGVY 221
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+YN ++NA K + + K G+KP TY M+ Y CL+ G
Sbjct: 222 IYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGY--CLV----------G 269
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
++ A M Q GV Y + LC R +AM ++ ++ ++ P +T+
Sbjct: 270 EVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLH-KNMVPDTVTY 328
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
LI G I +++ M +P ++ T ++L +N KA LF +
Sbjct: 329 NSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 388
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
++P YTY+++++ + + + +++ + + GC +D +
Sbjct: 389 RG-------------IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTV 435
Query: 555 LLVEASRAGKCHLLEHAFDSLL-------EAGEIPHPLFFTEMLIQAIVQSN-YEKAVAL 606
++ +G C E FD L + G IP+ + F E++I+++ + + +KA L
Sbjct: 436 MI-----SGLCK--EGMFDEALAIKSKMEDNGCIPNAVTF-EIIIRSLFEKDENDKAEKL 487
Query: 607 INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL 645
++ M + + + ++F NE+ DK EKLL+ +
Sbjct: 488 LHEMIAKGLLVLDFKVADVFVQNEN----DKAEKLLHEM 522
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 123/292 (42%), Gaps = 39/292 (13%)
Query: 304 KNWD---PVLE---------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K WD PV E PD++ YN ++ + Q ++ L ++ P+ T
Sbjct: 296 KKWDLIIPVCEWILYRSSFRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDT 355
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y L L+RA+ G ++ A + M + G+ A+VY L
Sbjct: 356 YAL------------LLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARC 403
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 470
+ A+ V +++K R E TFT +I + +F MK C+PNI T
Sbjct: 404 TEKAVEVYQRMKRERCRANTE-TFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYT 462
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
A++ ++R + KA+E+FEE +A +PD Y Y++++EA + A
Sbjct: 463 ALVNAFAREGLCEKAEEVFEEMQQAGH-------------EPDVYAYNALMEAYSRAGLP 509
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ ++ M GC+ D+ + L+ RAG E F+ L + G P
Sbjct: 510 QGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSP 561
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 33/262 (12%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K +R + +T ++ + GKA +P ++++FN M + P+I Y ++ + G
Sbjct: 414 MKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEM-KSIGCKPNICTYTALVNAFAREG 472
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
L ++ ++ E M+Q EPD+ YNA++ A + +G +F
Sbjct: 473 LCEKAEEVFEEMQQAGH---------------EPDVYAYNALMEAYSRAGLPQGASEIFS 517
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
++ G +P A+Y + +++Y R L A +EE ++QRG+ T
Sbjct: 518 LMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEE------------LKQRGMSPTMKS 565
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQ 456
+ L L + R +A E + L S P ++ + G +DD +
Sbjct: 566 HMLL---LAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLLA 622
Query: 457 HMKDHCEPNIGTVNAMLKVYSR 478
M+ + ++GT N + Y R
Sbjct: 623 AMERRGDADVGTYNVAVNAYGR 644
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 138/317 (43%), Gaps = 49/317 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLI 287
F ++ L++ GK+G EA+++F M + L P++ Y++V G+ G+ K +V++
Sbjct: 223 FAFSALISAYGKSGYFDEAIKVFESM-KVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIF 281
Query: 288 ERMRQKPSK--RI------------------KNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
E M + + RI +N+ + D ++ D+ YN +L+A
Sbjct: 282 EEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKG 341
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
Q + + ++ + P+ TY + Y + G++ +A+ M
Sbjct: 342 GQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKA------------GRLEDALNLYNEM 389
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+ G+ Y L GR++DA+ V +++ S K + +T+ L+ G
Sbjct: 390 KFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDV-VTYNALLDGYGKQGK 448
Query: 448 IDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
++ +F+ MK D PN+ T + ++ VYS+ ++ +A E+F E +A
Sbjct: 449 FNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAG---------- 498
Query: 507 GAPLKPDEYTYSSMLEA 523
LK D YS ++ A
Sbjct: 499 ---LKADVVLYSELINA 512
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ K+ L + Y+ + KAGR +AL ++N M + + D +Y+++ ++G
Sbjct: 354 MPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEM-KFLGIGLDRVSYNTLLSIYAKLG 412
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
++ +K+ + M K+ D+V YNA+L+ ++ V VFK
Sbjct: 413 RFEDALKVCKEMGSSGVKK---------------DVVTYNALLDGYGKQGKFNEVTRVFK 457
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
+++K + P+ TY ++ Y + L EA+ R +Q G+ +
Sbjct: 458 EMKKDRVFPNLLTYSTLIDVYSKGSL------------YEEAMEVFREFKQAGLKADVVL 505
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
Y EL LC NG A+L+++++ +P +T+ +I
Sbjct: 506 YSELINALCKNGLVDSAVLLLDEMTK-EGIRPNVVTYNSII 545
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 104/252 (41%), Gaps = 41/252 (16%)
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
RC LVR EG+ NE RG + +A + L G+ + A V E
Sbjct: 171 RCFDFALVR----EGRKNE----------RGKLASAMI-----STLGRLGKVELAKGVFE 211
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRN 479
S + + F+ LI + G+ D+ I +F+ MK +PN+ T NA++ +
Sbjct: 212 TALSEGYGNTV-FAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKG 270
Query: 480 DM-FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
+ F + E+FEE R ++PD TY+S+L + WE ++
Sbjct: 271 GVEFKRVVEIFEEMLRNG-------------VQPDRITYNSLLAVCSRGGLWEAARNLFN 317
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
M G D + LL + G+ L A++ +L E+P ++ + +
Sbjct: 318 EMIDRGIDQDVFTYNTLLDAVCKGGQMDL---AYEIML---EMPGKKILPNVVTYSTMAD 371
Query: 599 NYEKAVALINAM 610
Y KA L +A+
Sbjct: 372 GYAKAGRLEDAL 383
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 110/279 (39%), Gaps = 47/279 (16%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLKELV 284
R Y LLA+ + G A +FN M+ D + D+ Y+++ + GQ+ L E+
Sbjct: 293 RITYNSLLAVCSRGGLWEAARNLFNEMI-DRGIDQDVFTYNTLLDAVCKGGQMDLAYEI- 350
Query: 285 KLIERMRQKPSKRI-----------------------KNMHRKNWDPVLEPDLVVYNAVL 321
M + P K+I N++ + + D V YN +L
Sbjct: 351 -----MLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLL 405
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
+ +++ V K++ SG+K TY ++ Y + +GK NE
Sbjct: 406 SIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGK------------QGKFNEVT 453
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
+ M++ V Y L +++AM V + K K + ++ LI +
Sbjct: 454 RVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQ-AGLKADVVLYSELINA 512
Query: 442 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 479
G +D + + M K+ PN+ T N+++ + R+
Sbjct: 513 LCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRS 551
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 25/229 (10%)
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
R L ++ GK+ A G T + L +G + +A+ V
Sbjct: 186 RGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVF 245
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGG-HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 477
E +K + KP +T+ +I + GG + IF+ M ++ +P+ T N++L V S
Sbjct: 246 ESMK-VSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCS 304
Query: 478 RNDMFSKAKELFEETT--RANSSGYTF--------------------LSGDGAPLKPDEY 515
R ++ A+ LF E + +T+ L G + P+
Sbjct: 305 RGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVV 364
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
TYS+M + A A + E +Y M G LD+ + LL ++ G+
Sbjct: 365 TYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGR 413
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 62/136 (45%), Gaps = 16/136 (11%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
K Y LL GK G+ +E R+F M +D ++P++ Y ++ + L +E ++
Sbjct: 431 KDVVTYNALLDGYGKQGKFNEVTRVFKEMKKD-RVFPNLLTYSTLIDVYSKGSLYEEAME 489
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ +Q L+ D+V+Y+ ++NA + + ++ K G+
Sbjct: 490 VFREFKQAG---------------LKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGI 534
Query: 346 KPSAATYGLAMESYRR 361
+P+ TY ++++ R
Sbjct: 535 RPNVVTYNSIIDAFGR 550
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/422 (18%), Positives = 174/422 (41%), Gaps = 43/422 (10%)
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+R+K ++ ++ + + + PD + Y+ ++N + ++ + + ++ K G+ P
Sbjct: 9 VRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHN 68
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
A Y +++ + G+++ A+ R+M QR + Y L LC +
Sbjct: 69 AVY------------NTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKS 115
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGT 468
R DA L++E + P +T+ LI G++D+ + +F Q +++ C P++ T
Sbjct: 116 ARISDASLILEDMIE-AGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 174
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTR----ANSSGYTFL------SG---DGAPL----- 510
N ++ Y + + +L +E + N Y L SG D L
Sbjct: 175 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 234
Query: 511 ----KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
KP +T++ M++ Q + +++ M GC D + ++ A RA +
Sbjct: 235 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 294
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 626
+ + EAG P + + ++ S ++A + + + + + L
Sbjct: 295 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 354
Query: 627 ESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQA 686
+ D EKLL + N ++ ++ + +H C++++ L S F S+
Sbjct: 355 DGLCKSRRLDDAEKLLREM-ERNGSAPDVVAYTI--LIHGFCKADQ---LDKSLAFFSEM 408
Query: 687 ID 688
+D
Sbjct: 409 LD 410
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 28/248 (11%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N +L+A V + + + +FK P + TY L+ F +
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITY------------STLINGFCKARDF 49
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+A + ME+RG+V +VY + LC+NGR A++ ++ RH P IT+T
Sbjct: 50 QQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ--RHCAPSVITYTI 107
Query: 438 LIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
L+ + I D I + M + C PN+ T N ++ + + +A LF + +
Sbjct: 108 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 167
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
S PD +TY+ +++ + + + + M GC+ + + L+
Sbjct: 168 CS-------------PDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLM 214
Query: 557 VEASRAGK 564
++GK
Sbjct: 215 DSLVKSGK 222
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 79/439 (17%), Positives = 173/439 (39%), Gaps = 78/439 (17%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-----SRF 229
++ + M + G++ ++KGL D G A L RD++ S
Sbjct: 53 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSA---------LVHYRDMQRHCAPSVI 103
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT L+ L K+ R +A I M+E P++ Y+++ ++G + E V L +
Sbjct: 104 TYTILVDALCKSARISDASLILEDMIEA-GCAPNVVTYNTLINGFCKLGNMDEAVVLFNQ 162
Query: 290 M---------------------RQKP---SKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
M +++P +K ++ M + EP+ + YN ++++ V
Sbjct: 163 MLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC----EPNFITYNTLMDSLV 218
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
S ++ F + + + + KPS T+ L ++ F + G+++ A +
Sbjct: 219 KSGKYIDAFNLAQMMLRRDCKPSHFTFNL------------MIDMFCKVGQLDLAYELFQ 266
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M RG + Y + C R DA ++E++ P +T+ ++
Sbjct: 267 LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTE-AGCPPDVVTYNSIVSGLCKA 325
Query: 446 GHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+D+ +++ +++ ++ T + ++ ++ A++L E R S+
Sbjct: 326 SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSA------ 379
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
PD Y+ ++ A Q + + M GC ++ ++ + ++ +
Sbjct: 380 -------PDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSAR 432
Query: 565 ----CHLLEHAFDSLLEAG 579
C LL+ ++LE G
Sbjct: 433 VRDGCMLLK----TMLERG 447
>gi|414874087|tpg|DAA52644.1| TPA: hypothetical protein ZEAMMB73_282844 [Zea mays]
Length = 282
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 126/291 (43%), Gaps = 58/291 (19%)
Query: 557 VEASRAGKC------HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ ++A +C +LLEHA DS+LE GEIP TE + Q+I +Y + + L+N M
Sbjct: 44 IPLTKAPRCAEKENPYLLEHALDSILERGEIPDVQLITESICQSIAHRDYGRTLQLLNIM 103
Query: 611 AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRS 670
A I E +W L + N + S D LE L+ L + N ++ +L RAL + CR
Sbjct: 104 TQASIKIKEVEWDYLLQQNMHQFSIDALEGLIKYL-STNGTTNADPAVDLVRALQSQCRD 162
Query: 671 EKERDLSSSAHFGSQAIDISPLHGIHEAFDVKETENVPSSSASMMFENADLGADPLPQKT 730
+ +Q ++S HG + S S + E L L T
Sbjct: 163 DT----------STQQFELS-FHGSGNKY-----------SCSSLAELDQLTCKNL--CT 198
Query: 731 DVAVDIDSINHSSLSRQADADTEMFSKALSYIHSNDRPSNLCIDMEGLADDWASSEHSDY 790
D+ +D+ +D EM +S + +C D+ L ++H
Sbjct: 199 DIILDV-----------PGSDREMPQLGVSAL--------MCRDI-SLNGQRVENKH--- 235
Query: 791 LDKELAALYLSKQSQDNDVVDLQKSMNRVGGSRRSELPSASEILEAWKESR 841
EL+ L + Q + + + SMN G + E+PSAS+ILE W+ R
Sbjct: 236 ---ELSDLG-QRGPQVSAIDKVLDSMNSYGDNSYGEMPSASKILELWEHER 282
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 163/420 (38%), Gaps = 52/420 (12%)
Query: 124 LNWVLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMN 182
LN +++ +G F +V KR + + L+ L + K F +
Sbjct: 345 LNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLL 404
Query: 183 QSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAG 242
G + L+ G+ G R A+ +L + G K +++ +Y+ ++ L K
Sbjct: 405 AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVE---MYSTIIDALCKYQ 461
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM------------ 290
EA +F+ M + D+ Y ++ VG LKE + L+ M
Sbjct: 462 LVSEAYGLFSEMTVK-GISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTY 520
Query: 291 --------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
++ K K++ ++PD+ YN ++N + ++ K VF +
Sbjct: 521 TILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSL 580
Query: 343 SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
G+ P TY +L+ F + ++EA+ + M Q+ +V Y L
Sbjct: 581 MGVTPDVHTY------------TILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSL 628
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH- 461
LC +GR ++++++ R IT+ LI GH+D I++F MKD
Sbjct: 629 VDGLCKSGRISYVWDLIDEMRD-RGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQG 687
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
PN T +L + A+E+F++ + GY D Y Y+ M+
Sbjct: 688 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLL---TKGYHL----------DVYIYNVMI 734
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 154/367 (41%), Gaps = 50/367 (13%)
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
+ E ++D L + ++ ++ + M G+ L+ G G ++A+
Sbjct: 444 KPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIG 503
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV- 270
+L+ + D+++ YT L+ LGK G+ EA + +ML+ C + PD+ Y+++
Sbjct: 504 LLNEMVLKTINPDVRT---YTILVDALGKEGKVKEAKSVLAVMLKAC-VKPDVFTYNTLM 559
Query: 271 -----------------AVTLGQVG--------LLKELVKLIERMRQKPSKRIKNMHRKN 305
A++L V L+ K +M + K MH+KN
Sbjct: 560 NGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCK--SKMVDEALNLFKEMHQKN 617
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
+ PD V Y+++++ S + V+ + ++R G TY
Sbjct: 618 ----MVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITY------------N 661
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
L+ + G +++A+A M+ +G+ + L LC GR +DA V + + +
Sbjct: 662 SLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTK 721
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
+ + I + +I G +++ +++ M+++ C PN T + ++ + D K
Sbjct: 722 GYHLDVYI-YNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDK 780
Query: 485 AKELFEE 491
A++L +
Sbjct: 781 AEKLLRQ 787
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 58/317 (18%), Positives = 126/317 (39%), Gaps = 29/317 (9%)
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
K+ + H K + + V Y ++N +G + +++ KP+ Y
Sbjct: 394 KKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYS-- 451
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
++ A + ++EA M +G+ Y L C G+ ++A
Sbjct: 452 ----------TIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEA 501
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLK 474
+ ++ ++ L+ P T+T L+ + G + + S+ M C +P++ T N ++
Sbjct: 502 IGLLNEM-VLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMN 560
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
Y KA+ +F + L G + PD +TY+ ++ + +
Sbjct: 561 GYLLVYEVKKAQHVFNAMS---------LMG----VTPDVHTYTILINGFCKSKMVDEAL 607
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 594
++K M D ++ L+ ++G+ + D + + G+ P + LI
Sbjct: 608 NLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQ-PADVITYNSLIDG 666
Query: 595 IVQSNY-EKAVALINAM 610
+ ++ + +KA+AL N M
Sbjct: 667 LCKNGHLDKAIALFNKM 683
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 24/187 (12%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+P++ +YN +++A + +F ++ G+ + TY L+
Sbjct: 130 KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYS------------TLIYG 177
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE-KIKSLRHSK 429
F GK+ EA+ + M + + Y L LC G+ ++A V+ +K+ S
Sbjct: 178 FCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSN 237
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKD-----HCEPNIGTVNAMLKVYSRNDMFSK 484
IT++ L MDG + + QH+ + P++ + N M+ + + K
Sbjct: 238 --VITYSTL----MDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDK 291
Query: 485 AKELFEE 491
A LF+E
Sbjct: 292 ALNLFKE 298
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 122/296 (41%), Gaps = 35/296 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLM 254
L+ GL G W++ + W L R F +T L+ L K G+ EA +I LM
Sbjct: 222 LIHGLSRAGLWKE----VTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELM 277
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
PDI Y+++ L VG L++ KL E + + K ++
Sbjct: 278 HHKGK-EPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKL---------------NV 321
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
YN ++N + F +F+++R GLKPS TY L+ A +
Sbjct: 322 FSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTY------------NTLIGALCQS 369
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
G++ A M+ G S Y L LC NG ++A+ + + IK H +E+
Sbjct: 370 GRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEV- 428
Query: 435 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
F+ L+ G +++ F + K+ EP+ N ++ M S+A +L
Sbjct: 429 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 484
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 164/404 (40%), Gaps = 66/404 (16%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIM--NQSGLMFTEGQMLKLLKGLGDKGS 205
EK +A+ +L++ L + T K M N G +FT G ++ L G
Sbjct: 105 EKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGM---IIDSLCKDGM 161
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
+A+ + + G D+ VY+ L+ L + GR EAL F M E + D+
Sbjct: 162 TTEALDMFSEMIGAGILPDV---VVYSSLMDGLCRFGRLKEALEFFKEM-EGRGISADVY 217
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQK------------------------PSKRIKNM 301
Y+S+ L + GL KE+ + M + + ++ M
Sbjct: 218 TYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELM 277
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
H K EPD++ YN ++N Q + +F+ L G+K + +Y
Sbjct: 278 HHKGK----EPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSY--------- 324
Query: 362 CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
+L+ + ++ KI+EA M +G+ + Y L LC +GR + A + +
Sbjct: 325 ---NILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 381
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK--DHCEPNIGTVNAMLKVYSRN 479
+++ L T+ L+ GH+++ I +FQ +K +H +PNI + +L R
Sbjct: 382 MQTCGQFLKLS-TYCVLLDGLCKNGHLEEAIDLFQSIKKTEH-KPNIEVFSILLDGMCRA 439
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+A + F+E ++ L+PD Y+ ++
Sbjct: 440 GKLEEAWKQFDEISKNG-------------LEPDTIAYNILING 470
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 103/485 (21%), Positives = 178/485 (36%), Gaps = 89/485 (18%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+ L KA + A+++ M +C D+ Y + +L + G+ E + +
Sbjct: 114 TYGILINGLCKARKTGLAIKLHEKMKGNCK--GDVFTYGMIIDSLCKDGMTTEALDMFSE 171
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + PD+VVY+++++ + K FK++ G+
Sbjct: 172 M---------------IGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADV 216
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L+ G E + M RG A + L LC
Sbjct: 217 YTY------------NSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 264
Query: 410 GRWQDAMLVVEKIKSLRHSK---PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 465
G+ +A ++E L H K P +T+ L+ G ++D +F+ + D + N
Sbjct: 265 GKVGEAQQILE----LMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLN 320
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ + N ++ Y ++ +A LFEE LKP TY++++ A
Sbjct: 321 VFSYNILINGYCKDQKIDEAFRLFEEMRPKG-------------LKPSTVTYNTLIGALC 367
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+ + + ++ M G L + + LL + G LE A D + H
Sbjct: 368 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGH---LEEAIDLFQSIKKTEH-- 422
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEK----- 640
+ N E L++ M A E W + D IS++ LE
Sbjct: 423 -----------KPNIEVFSILLDGMCRA--GKLEEAWKQF-----DEISKNGLEPDTIAY 464
Query: 641 --LLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQAIDISPLHGIHEA 698
L+N LCN LS A+ L + E++ L S F ++ + IHEA
Sbjct: 465 NILINGLCN---------KGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEA 515
Query: 699 FDVKE 703
+ E
Sbjct: 516 IQLLE 520
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 127/335 (37%), Gaps = 33/335 (9%)
Query: 342 KSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
K G +P A T + LV+ W E I +AV M ++G+ G A Y
Sbjct: 70 KRGFEPDAVT------------VTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGI 117
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHM-K 459
L LC + A+ + EK+K + K T+ G+II S+ G + + +F M
Sbjct: 118 LINGLCKARKTGLAIKLHEKMKG--NCKGDVFTY-GMIIDSLCKDGMTTEALDMFSEMIG 174
Query: 460 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
P++ ++++ R +A E F+E +G + D YTY+S
Sbjct: 175 AGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM-------------EGRGISADVYTYNS 221
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 579
++ + A W+ + M G D L+ + GK + + + G
Sbjct: 222 LIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKG 281
Query: 580 EIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLE 639
+ P L + ++ + E A L ++A + + L D+
Sbjct: 282 KEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAF 341
Query: 640 KLLNALCNCNAASSEITVSNLSRALHALCRSEKER 674
+L + S +T + L + ALC+S + R
Sbjct: 342 RLFEEMRPKGLKPSTVTYNTL---IGALCQSGRVR 373
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S Y L+ L ++GR A ++F + ++ C + ++ Y + L + G L+E + L
Sbjct: 355 STVTYNTLIGALCQSGRVRTAQKLF-VEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDL 413
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +++ K P++ V++ +L+ + + + + F ++ K+GL+
Sbjct: 414 FQSIKKTEHK---------------PNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 458
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P Y +L+ +G ++EAV + ME++G + + + + L
Sbjct: 459 PDTIAY------------NILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 506
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
+A+ ++E++++ S +T L ++S D
Sbjct: 507 LKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFD 544
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 138/317 (43%), Gaps = 49/317 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLI 287
F ++ L++ GK+G EA+++F M + L P++ Y++V G+ G+ K +V++
Sbjct: 223 FAFSALISAYGKSGYFDEAIKVFESM-KVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIF 281
Query: 288 ERMRQKPSK--RI------------------KNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
E M + + RI +N+ + D ++ D+ YN +L+A
Sbjct: 282 EEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKG 341
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
Q + + ++ + P+ TY + Y + G++ +A+ M
Sbjct: 342 GQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKA------------GRLEDALNLYNEM 389
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+ G+ Y L GR++DA+ V +++ S K + +T+ L+ G
Sbjct: 390 KFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDV-VTYNALLDGYGKQGK 448
Query: 448 IDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
++ +F+ MK D PN+ T + ++ VYS+ ++ +A E+F E +A
Sbjct: 449 FNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAG---------- 498
Query: 507 GAPLKPDEYTYSSMLEA 523
LK D YS ++ A
Sbjct: 499 ---LKADVVLYSELINA 512
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ K+ L + Y+ + KAGR +AL ++N M + + D +Y+++ ++G
Sbjct: 354 MPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEM-KFLGIGLDRVSYNTLLSIYAKLG 412
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
++ +K+ + M K+ D+V YNA+L+ ++ V VFK
Sbjct: 413 RFEDALKVCKEMGSSGVKK---------------DVVTYNALLDGYGKQGKFNEVTRVFK 457
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
+++K + P+ TY ++ Y + L EA+ R +Q G+ +
Sbjct: 458 EMKKDRVFPNLLTYSTLIDVYSKGSL------------YEEAMEVFREFKQAGLKADVVL 505
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
Y EL LC NG A+L+++++ +P +T+ +I
Sbjct: 506 YSELINALCKNGLVDSAVLLLDEMTK-EGIRPNVVTYNSII 545
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 104/252 (41%), Gaps = 41/252 (16%)
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
RC LVR EG+ NE RG + +A + L G+ + A V E
Sbjct: 171 RCFDFALVR----EGRKNE----------RGKLASAMI-----STLGRLGKVELAKGVFE 211
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRN 479
S + + F+ LI + G+ D+ I +F+ MK +PN+ T NA++ +
Sbjct: 212 TALSEGYGNTV-FAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKG 270
Query: 480 DM-FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
+ F + E+FEE R ++PD TY+S+L + WE ++
Sbjct: 271 GVEFKRVVEIFEEMLRNG-------------VQPDRITYNSLLAVCSRGGLWEAARNLFN 317
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
M G D + LL + G+ L A++ +L E+P ++ + +
Sbjct: 318 EMIDRGIDQDVFTYNTLLDAVCKGGQMDL---AYEIML---EMPGKKILPNVVTYSTMAD 371
Query: 599 NYEKAVALINAM 610
Y KA L +A+
Sbjct: 372 GYAKAGRLEDAL 383
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 110/279 (39%), Gaps = 47/279 (16%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLKELV 284
R Y LLA+ + G A +FN M+ D + D+ Y+++ + GQ+ L E+
Sbjct: 293 RITYNSLLAVCSRGGLWEAARNLFNEMI-DRGIDQDVFTYNTLLDAVCKGGQMDLAYEI- 350
Query: 285 KLIERMRQKPSKRI-----------------------KNMHRKNWDPVLEPDLVVYNAVL 321
M + P K+I N++ + + D V YN +L
Sbjct: 351 -----MLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLL 405
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
+ +++ V K++ SG+K TY ++ Y + +GK NE
Sbjct: 406 SIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGK------------QGKFNEVT 453
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
+ M++ V Y L +++AM V + K K + ++ LI +
Sbjct: 454 RVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQ-AGLKADVVLYSELINA 512
Query: 442 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 479
G +D + + M K+ PN+ T N+++ + R+
Sbjct: 513 LCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRS 551
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 25/229 (10%)
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
R L ++ GK+ A G T + L +G + +A+ V
Sbjct: 186 RGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVF 245
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGG-HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 477
E +K + KP +T+ +I + GG + IF+ M ++ +P+ T N++L V S
Sbjct: 246 ESMK-VSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCS 304
Query: 478 RNDMFSKAKELFEETT--RANSSGYTF--------------------LSGDGAPLKPDEY 515
R ++ A+ LF E + +T+ L G + P+
Sbjct: 305 RGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVV 364
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
TYS+M + A A + E +Y M G LD+ + LL ++ G+
Sbjct: 365 TYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGR 413
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 62/136 (45%), Gaps = 16/136 (11%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
K Y LL GK G+ +E R+F M +D ++P++ Y ++ + L +E ++
Sbjct: 431 KDVVTYNALLDGYGKQGKFNEVTRVFKEMKKD-RVFPNLLTYSTLIDVYSKGSLYEEAME 489
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ +Q L+ D+V+Y+ ++NA + + ++ K G+
Sbjct: 490 VFREFKQAG---------------LKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGI 534
Query: 346 KPSAATYGLAMESYRR 361
+P+ TY ++++ R
Sbjct: 535 RPNVVTYNSIIDAFGR 550
>gi|167998294|ref|XP_001751853.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696951|gb|EDQ83288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 657
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 162/399 (40%), Gaps = 57/399 (14%)
Query: 208 QAMSVLDWVYGLKDKRDLKSRF--------------VYTKLLAILGKAGRPHEALRIFNL 253
++M+V+ W G D SR V T L+A+LG R EAL++F
Sbjct: 174 RSMNVVVWQLGQMRNWDAASRVFRAFRSASVEPNAHVCTTLIAVLGYGRRLPEALKLFRW 233
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M E + I ++++ V G+ G V+L E M++ L PD
Sbjct: 234 M-EKQGIERPIYTFNALMVACGRCGAGDTAVELFEEMKELG---------------LAPD 277
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
+ + +++A + +WK ++ G + + E C R
Sbjct: 278 NITFRGLVSATTAAGKWKAAQSFINLMQAGGFSFAIGEF---TEMQWACARARNSR---- 330
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
E++ ++ M ++G Y L C W++A+ V I+ + P I
Sbjct: 331 -----ESLGLLQAMIEQGCEPRLENYNALLCAYEKTANWEEAVRTVVWIQE-KGFTPDFI 384
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T++ L+ + + G + +++ + MK ++ PN+ + +LK Y + + K +E+F
Sbjct: 385 TWSSLLGACANAGQAEKAVAVMEKMKENNFTPNVVSWCYLLKAYQKTGNWEKTEEIFHS- 443
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
+ G P P+E ++S+L A QW+ Y + G +LD
Sbjct: 444 ----------MLNSGCP--PNEVAWNSLLSAYEKGRQWKRVLYTIEKQEELGVKLDVVAW 491
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + ++AG+ L E + ++G P+ + ++ ++
Sbjct: 492 STTISALAKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLI 530
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 156/394 (39%), Gaps = 55/394 (13%)
Query: 172 AKNWK----FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
A WK F+ +M G F G+ ++ + R+++ +L + + L++
Sbjct: 291 AGKWKAAQSFINLMQAGGFSFAIGEFTEMQWACARARNSRESLGLLQAMIEQGCEPRLEN 350
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
Y LL K EA+R + +++ PD + S+ G ++ V ++
Sbjct: 351 ---YNALLCAYEKTANWEEAVRTV-VWIQEKGFTPDFITWSSLLGACANAGQAEKAVAVM 406
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E+M++ P++V + +L A + W+ +F + SG P
Sbjct: 407 EKMKENN---------------FTPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLNSGCPP 451
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGK-INEAVAAVRNMEQRGVVGTASVYYELACCL 406
+ + + +Y E+G+ + + E+ GV + L
Sbjct: 452 NEVAWNSLLSAY-------------EKGRQWKRVLYTIEKQEELGVKLDVVAWSTTISAL 498
Query: 407 CNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCE 463
G+WQ L +KI+ ++ S +P +T++ LI + D G + S+F+ M +
Sbjct: 499 AKAGQWQ---LAEKKIRQMKQSGCQPNIVTYSSLIKAYGDVGLWNKAESVFKSMLLEGIR 555
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
P+ A+L+ Y++ K F+ + + G +KPD+Y Y+++ A
Sbjct: 556 PDSKACCALLRAYAKGRQLDKVMFFFD----------SMMPRYG--IKPDKYAYAAIFWA 603
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 557
T +W+ + M +GC D + L+
Sbjct: 604 CWTCGEWQRAADYMENMEAAGCTPDTMIYTTLIT 637
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 102/494 (20%), Positives = 192/494 (38%), Gaps = 69/494 (13%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D L + + + + R M SG++ LL GL + QA+++L + +
Sbjct: 49 ILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAIL---HEM 105
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+D + Y L+ L K P A +F M + P + Y+++ L + G
Sbjct: 106 RDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHM-KSVECSPSMVTYNTLLDGLFRTGK 164
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L+ + L + M + S + D P+++ Y+ +++ +++ + +
Sbjct: 165 LERAMALFQEMLDRRSH--------DMDDRCSPNVITYSVLIDGLCKANRVSQAVELLES 216
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
++ G P TY +LV +E K+ A +R M G V Y
Sbjct: 217 MKARGCSPDVITY------------TILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTY 264
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
L LC R DA+ ++ + + R P +T+ LI G + D ++ M
Sbjct: 265 NSLLHGLCRARRVSDALALMRDM-TCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMI 323
Query: 460 DHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY------------------ 500
D P++ N ++ + D ++ L RA S G
Sbjct: 324 DKGGTPDLMIYNMLINGLCKADQVDESIALLR---RAVSGGIKPDVVTYSSVIYGLCRSN 380
Query: 501 ---------TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
++ G P PD YS++++ A + + +Y+ MA GC D
Sbjct: 381 RLDEACRLLLYVKSRGCP--PDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVT 438
Query: 552 HAWL---LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALI 607
++ L L +A R + HLL ++ G P + + LI+ + N+ ++A+ L+
Sbjct: 439 YSTLIDGLCKAGRVDEAHLL---LARMVRMGTPPSTMTYNS-LIKGLCDLNHLDEAIELV 494
Query: 608 NAMA---YAPFHIT 618
M AP +T
Sbjct: 495 EEMERSNCAPSAVT 508
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 134/355 (37%), Gaps = 58/355 (16%)
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY-------- 359
P+ +PD+ Y A+L + F ++R L P+ + ++
Sbjct: 3 PICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSID 62
Query: 360 -RRC--------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
RC + L+ W+E ++++A+A + M G Y L
Sbjct: 63 ALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLID 122
Query: 405 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH------- 457
LC N A + E +KS+ S P +T+ L+ G ++ +++FQ
Sbjct: 123 GLCKNNEPDRAQELFEHMKSVECS-PSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSH 181
Query: 458 -MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS----GYTFLSGDG----- 507
M D C PN+ T + ++ + + S+A EL E S YT L DG
Sbjct: 182 DMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILV-DGLCKES 240
Query: 508 --------------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
A P+ TY+S+L A + + + M GC + +
Sbjct: 241 KVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYG 300
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALI 607
L+ + G+ +++ G P + + MLI + +++ ++++AL+
Sbjct: 301 TLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIY-NMLINGLCKADQVDESIALL 354
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 56/291 (19%), Positives = 113/291 (38%), Gaps = 42/291 (14%)
Query: 196 LLKGLGDKGSWRQAMSVL-DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
L+ GL G + A ++L D + DK +Y L+ L KA + E++ +
Sbjct: 302 LIDGLCKVGRVKDACAMLADMI----DKGGTPDLMIYNMLINGLCKADQVDESIALLRRA 357
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL---- 310
+ + PD+ Y SV L + L E +L+ ++ + ++ D +
Sbjct: 358 VSG-GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGK 416
Query: 311 ----------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ D+V Y+ +++ + + + ++ + G PS TY
Sbjct: 417 VDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTY-- 474
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
L++ + ++EA+ V ME+ +A Y L +C R
Sbjct: 475 ----------NSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDS 524
Query: 415 AMLVVEKIKS---LRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHMKDH 461
A++++E+ K+ L+ I ++ LI G + + + FQ M D+
Sbjct: 525 AVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDN 575
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 160/378 (42%), Gaps = 50/378 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAIL 238
M+Q G+ E L+ G W A +L + G+K S +V++++LA
Sbjct: 325 MSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK-----PSSYVFSRILAGF 379
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
G +A + M + + PD Y+ + T G+ L + +MR++
Sbjct: 380 RDRGDWQKAFAVLREM-QASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEG---- 434
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
+EPD+V +N +++A + +F+++R+S P TY
Sbjct: 435 -----------IEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTY------ 477
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
+++ E+ A + M+++G+V Y L +GR+++A+
Sbjct: 478 ------NIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDC 531
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYS 477
+E +K+ KP + L+ + G D +++ + MK D E +I +N+++ +
Sbjct: 532 IEAMKA-DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFG 590
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+ +A + + F+ +G L+PD TY+++++A Q++ +Y
Sbjct: 591 EDRRVVEAFSVLQ-----------FMRENG--LRPDVITYTTLMKALIRVEQFDKVPVIY 637
Query: 538 KGMALSGCQLDQTKHAWL 555
+ M SGC D+ A L
Sbjct: 638 EEMITSGCAPDRKARAML 655
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 138/330 (41%), Gaps = 47/330 (14%)
Query: 172 AKNWKFVRI----MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
A W+ RI M G+ + ++L G D+G W++A +VL + + D
Sbjct: 347 AGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPD--- 403
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y ++ GK A+ FN M E+ + PD+ ++++ + G +L
Sbjct: 404 RHFYNVMIDTFGKYNCLGHAMDAFNKMREE-GIEPDVVTWNTLIDAHCKGGRHDRAAELF 462
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E MR+ P YN ++N W+GV + ++++ GL P
Sbjct: 463 EEMRESNCP---------------PGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVP 507
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ TY LV + G+ EA+ + M+ G+ + ++Y+ L
Sbjct: 508 NIITY------------TTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYA 555
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD-----CISIFQHMKDH- 461
G A+ VV+ +K + LE++ L+++S+ +D S+ Q M+++
Sbjct: 556 QRGLADHALNVVKAMK----ADGLEVSI--LVLNSLINAFGEDRRVVEAFSVLQFMRENG 609
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
P++ T ++K R + F K ++EE
Sbjct: 610 LRPDVITYTTLMKALIRVEQFDKVPVIYEE 639
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 124/307 (40%), Gaps = 37/307 (12%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++P YNA+L V K V ++ + G+ P ATY L +++Y R
Sbjct: 295 IKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRA------- 347
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
WE +I ++ ME GV ++ V+ + + G WQ A V+ ++++ +
Sbjct: 348 GRWESARI-----LLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQA-SGVR 401
Query: 430 PLEITFTGLIISSMDG----GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
P + F ++I + GH D F M++ EP++ T N ++ + + +
Sbjct: 402 P-DRHFYNVMIDTFGKYNCLGHAMDA---FNKMREEGIEPDVVTWNTLIDAHCKGGRHDR 457
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A ELFEE +N P TY+ M+ WE E + M G
Sbjct: 458 AAELFEEMRESNC-------------PPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQG 504
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKA 603
+ + L+ R+G+ +++ G P P + L+ A Q + A
Sbjct: 505 LVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMY-HALVNAYAQRGLADHA 563
Query: 604 VALINAM 610
+ ++ AM
Sbjct: 564 LNVVKAM 570
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 131/340 (38%), Gaps = 53/340 (15%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
T L++ LG AGR EA +F + P AY+++ ++ LK ++++ M
Sbjct: 267 TALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMS 326
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
Q + PD Y+ +++A + +W+ + K++ G+KPS+
Sbjct: 327 QCG---------------VAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYV 371
Query: 352 YGLAMESYR-----------------------RCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ + +R R V++ F + + A+ A M
Sbjct: 372 FSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMR 431
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
+ G+ + L C GR A + E+++ + P T+ +I + H
Sbjct: 432 EEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRE-SNCPPGTTTYNIMINLLGEQEHW 490
Query: 449 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
+ ++ MK+ PNI T ++ VY R+ + +A + E + DG
Sbjct: 491 EGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEA-----------MKADG 539
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
LKP Y +++ A A ++ V K M G ++
Sbjct: 540 --LKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEV 577
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/361 (20%), Positives = 153/361 (42%), Gaps = 42/361 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L +A +P AL + M +D + + ++ L + G ++ + L++ +
Sbjct: 179 YTVLIGALAEARQPERALELLRQM-QDVGYEVSVPLFTTLVRALAREGQMEPALALVDEV 237
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ LEPD+V+YN ++ + + F +L+ GL+P
Sbjct: 238 KGS---------------CLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDV 282
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+Y ++ VL +A G++ EA ME V A Y + +
Sbjct: 283 SY--------TSMVWVLCKA----GRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAE 330
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVN 470
R+ DA ++E+++ R P ++F ++ +D+ +++F MK +PNI T N
Sbjct: 331 RFDDAYKLLERLRE-RGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYN 389
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
++ + ++A ++ +E A L P+ + + M++ A+Q
Sbjct: 390 IIIDMLCMAGRVNEAYKIRDEMELAG-------------LFPNLLSVNIMVDRLCKANQL 436
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
E +++ + GC + + L+ + GK F+ +L+AG +P+ +T +
Sbjct: 437 EEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSL 496
Query: 591 L 591
+
Sbjct: 497 I 497
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 94/472 (19%), Positives = 178/472 (37%), Gaps = 91/472 (19%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
++ ++VDRL + + + ++ G L+ GLG KG A + +
Sbjct: 422 SVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFE-- 479
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE--------------DC---- 258
+ D + +YT L+ GR + +I+ M+ DC
Sbjct: 480 -KMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKA 538
Query: 259 ----------------NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
PD+ +Y + L + G +E + + M Q+
Sbjct: 539 GEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQG-------- 590
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
D YNAV++ S + + V ++++ + P+ ATYG
Sbjct: 591 -------FALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYG--------- 634
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
+V + +++EA + +G+ +Y L GR +A L++E++
Sbjct: 635 ---SIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEM 691
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT----VNAMLKVYS 477
+ P T+ L+ + + ID+ + FQ MK+ C PN T +N + +V
Sbjct: 692 MK-KGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 750
Query: 478 RNDMFSKAKELFEETTRANSSGYT-FLSG--------DGAPL---------KPDEYTYSS 519
N F +E+ ++ N YT +SG D L PD ++++
Sbjct: 751 YNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNA 810
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
++E + A++ V++ L GC+L+ K L++A +C LE A
Sbjct: 811 LIEGMSNANRPMEAYQVFEETRLRGCRLN-VKTCISLLDALNKTEC--LEQA 859
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 91/479 (18%), Positives = 178/479 (37%), Gaps = 106/479 (22%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G + A +L+ L+++ + S + +L LGK + EAL +F++M
Sbjct: 322 MIMGYGSAERFDDAYKLLER---LRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMK 378
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+D P+I+ Y+ + L G + E K+ + M L P+L+
Sbjct: 379 KDAK--PNISTYNIIIDMLCMAGRVNEAYKIRDEMELAG---------------LFPNLL 421
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY----------GLAMESYR----- 360
N +++ ++Q + +F+ + G P++ TY G ++YR
Sbjct: 422 SVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKM 481
Query: 361 --------RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
+ L+R F+ G+ + + M +RG ++ C+ G
Sbjct: 482 LDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEV 541
Query: 413 QDAMLVVEKIKS---LRHSKPLEITFTGL-----------IISSM--------------- 443
+ + E +KS L + I GL I +M
Sbjct: 542 EKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAV 601
Query: 444 -DG----GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
DG G +D + + MK H P + T +++ ++ D +A LFEE A S
Sbjct: 602 VDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEE---AKS 658
Query: 498 SGY--------TFLSGDG-----------------APLKPDEYTYSSMLEASATAHQWEY 532
G + + G G L P+ YT++S+++A + +
Sbjct: 659 KGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDE 718
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
++ M C + ++ L+ R K + + + + G IP+ + +T M+
Sbjct: 719 ALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMI 777
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 186/463 (40%), Gaps = 66/463 (14%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
V++ L + + F M GL FT G L+ GL G ++A ++LD +
Sbjct: 285 VMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYG---ALMNGLCKGGRLKEAKALLDEM 341
Query: 217 Y--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
GLK + VY L+ K G+ EA I N M+ + P+ Y ++ L
Sbjct: 342 SCSGLK-----PNVVVYATLVDGFMKEGKAAEAFDILNEMIS-AGVQPNKIMYDNLIRGL 395
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
++G L KL+ M IK HR PD Y+ ++ + G F
Sbjct: 396 CKIGQLGRASKLLNEM-------IKVGHR--------PDTFTYHPLMQGHFQHYDKDGAF 440
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
+ ++R SG+ P+A TYG +++ + G+ EA + M G+
Sbjct: 441 ELLNEMRNSGILPNAYTYG------------IMINGLCQNGESKEAGNLLEEMISEGLKP 488
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEITFTGLIISSMDGGHIDDCI 452
A +Y L + + + L E ++++ + P + LI G I++
Sbjct: 489 NAFMYAPL---IIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAE 545
Query: 453 SIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 511
+ Q K P+ T + ++ Y + KA +L ++ + LK
Sbjct: 546 EYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSG-------------LK 592
Query: 512 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
P+ TY+ +LE ++ E + + M SG + D + ++ SR+ +E A
Sbjct: 593 PNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSEN---MEVA 649
Query: 572 FDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
F L E G +P ++ ++ ++ EKAV L++ MA
Sbjct: 650 FMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMA 692
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 117/309 (37%), Gaps = 37/309 (11%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ PD+ Y+ L A + + VF+++R+ + TY V++
Sbjct: 241 IPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTY------------NVMIS 288
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
G + EA M G+ A Y L LC GR ++A +++++ S K
Sbjct: 289 GLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEM-SCSGLK 347
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P + + L+ M G + I M +PN + +++ + +A +L
Sbjct: 348 PNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKL 407
Query: 489 FEETTRANSSGYTF-----LSG-------DGA----------PLKPDEYTYSSMLEASAT 526
E + TF + G DGA + P+ YTY M+
Sbjct: 408 LNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQ 467
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
+ + + + M G + + +A L++ S+ G L + +++ +A +P LF
Sbjct: 468 NGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPD-LF 526
Query: 587 FTEMLIQAI 595
LI+ +
Sbjct: 527 CYNSLIKGL 535
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 72/166 (43%), Gaps = 8/166 (4%)
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
F+ G G P PD YTYS+ LEA A ++ + V++ M C +++ + ++ R
Sbjct: 235 FMEGAGIP--PDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 292
Query: 562 AGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 618
+G +E AF + +++ G P + ++ ++A AL++ M+ +
Sbjct: 293 SGA---VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPN 349
Query: 619 ERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 664
+ L + + +LN + + ++I NL R L
Sbjct: 350 VVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGL 395
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 114/315 (36%), Gaps = 46/315 (14%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
+ ++ M SGL LL+G + S+L + G DK D +Y ++
Sbjct: 581 QLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPD---NHIYGIVI 637
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ-------VGLLKELVK--- 285
L ++ A + +E L PD+ Y S+ L + VGLL E+ K
Sbjct: 638 RNLSRSENMEVAFMVLT-EVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGL 696
Query: 286 ---------LIERM-RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
LI+ R R +N+ L P+ V Y A+++ + F
Sbjct: 697 EPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFD 756
Query: 336 VFKQLRKSGLKPSAATYG-----------------LAMESYRR-----CLLKVLVRAFWE 373
++K + G+ P A Y L E + R L LVR F +
Sbjct: 757 LYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCK 816
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
G++ E + M R +V A + G+ +A V +++ + S+
Sbjct: 817 RGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTD 876
Query: 434 TFTGLIISSMDGGHI 448
F+ L ++ G I
Sbjct: 877 RFSLLFTDMINKGLI 891
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 94/451 (20%), Positives = 177/451 (39%), Gaps = 68/451 (15%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGL------KDKRDLKSRF-----VYTKLLAILGKAGR 243
KL + +KG A++ V L D R+L RF VY L+ + K GR
Sbjct: 200 KLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGR 259
Query: 244 PHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR 303
A+++ M+++ + P++ +Y + +L G ++ L +M + N+H
Sbjct: 260 IEVAIKLLGEMMDN-GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCD--ANIH- 315
Query: 304 KNWDPVL------------------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ P++ EP++V YN +++ + + V Q
Sbjct: 316 -TFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQ 374
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+++SG P+ TY +L+ F + G + A M G Y
Sbjct: 375 MQRSGCLPNVTTY------------SILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 422
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
+ LC N + A +VEK+ +L P +TF I G ++ + + + M+
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKM-TLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQ 481
Query: 460 DH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
H C PNI T N +L R + + +A LF+E N L+P+ TY+
Sbjct: 482 GHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN-------------LQPNLVTYN 528
Query: 519 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 578
++L + A ++ + G D + ++ + GK + + +
Sbjct: 529 TVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSM 588
Query: 579 GEI-PHPLFFTEMLIQAIVQSNYEKAVALIN 608
E P + +T ++ A N E+A+A ++
Sbjct: 589 KEWHPDIITYTSLIWGACNWMNIEEAMAFLD 619
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 127/302 (42%), Gaps = 37/302 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL GS +A+ V D ++ L + Y+ L+ K+G A +N M+
Sbjct: 355 LIHGLCSNGSLEEALQVCDQ---MQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMH--------RK 304
P++ Y + L + + + L+E+M + P+ N R
Sbjct: 412 SH-GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRV 470
Query: 305 NWD-PVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
W +LE P++ YN +L+A ++++ F +F+++ L+P+ TY
Sbjct: 471 EWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTV 530
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+ + R G + EA+ RG + Y + C G+ + A
Sbjct: 531 LYGFSR------------AGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIA 578
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLK 474
+VE++ S++ P IT+T LI + + +I++ ++ + + PN T NA+++
Sbjct: 579 AQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR 638
Query: 475 VY 476
+
Sbjct: 639 CF 640
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 157/409 (38%), Gaps = 51/409 (12%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC------- 362
L P++ YN +L A + + +F ++ G P A TY + S +
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR 234
Query: 363 -----------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
+ L+ +EG+I A+ + M GV Y + LC +G
Sbjct: 235 ELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGN 294
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 470
+ A + ++ LR TFT LI G + + + +++ M +D CEPN+ N
Sbjct: 295 VELAFALFAQM-FLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYN 353
Query: 471 AMLKVYSRNDMFSKAKELFEETTRA----NSSGYTFL------SGD--GAP--------- 509
++ N +A ++ ++ R+ N + Y+ L SGD GA
Sbjct: 354 TLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISH 413
Query: 510 -LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
+P+ TY+ M++ ++ + + M L GC + + G+
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWA 473
Query: 569 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL---INAMAYAPFHITERQWTEL 625
+ + G +P+ + E+L + YE+A L I A P +T T L
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN--TVL 531
Query: 626 FESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKER 674
+ + + + L+ AL A S IT + + +HA C+ K +
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDS-ITYNTM---IHAYCKQGKVK 576
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 134/326 (41%), Gaps = 45/326 (13%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+P + +YN +L+A + ++++ + ++ ++K GL P+ TY +L++A
Sbjct: 141 KPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY------------NILLKA 188
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ +++ A M +G A Y + LC G+ DA + + KP
Sbjct: 189 LCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF------KP 242
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT----VNAMLKVYSRNDMFSKA 485
+ LI G I+ I + M D+ +PN+ + +N++ + F+
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF 302
Query: 486 KELFEETTRANSSGYT------FLSG--------------DGAPLKPDEYTYSSMLEASA 525
++F AN +T F+ G DG +P+ Y++++
Sbjct: 303 AQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGC--EPNVVAYNTLIHGLC 360
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+ E V M SGC + T ++ L+ +++G ++ ++ G P+ +
Sbjct: 361 SNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVV 420
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMA 611
+T M+ S +++A +L+ M
Sbjct: 421 TYTCMVDVLCKNSMFDQANSLVEKMT 446
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 139/334 (41%), Gaps = 43/334 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ +L GR +EA +F M+E N+ PD ++ + L + G++ E + E M
Sbjct: 155 YSSILHGFCNLGRSNEATSLFKQMVER-NVMPDTVTFNILVDGLSKEGMILEAQCVFETM 213
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+K +EP++ YNA+++ Q +F + + G PS
Sbjct: 214 IEKG---------------VEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVR 258
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+Y +L++ + G+I+EA + M + + Y L C +G
Sbjct: 259 SY------------NILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDG 306
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
R QDA ++E+++S P +T++ ++ GH+D+ + + M++ EPNI
Sbjct: 307 RPQDAQKLLEEMRS-YGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIY 365
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
+++ A+ELF F+ G ++PD TY+ M+
Sbjct: 366 TILIQGMCNFGKLEAARELFSN---------LFVKG----IQPDVVTYTVMISGLLKGGL 412
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
+++ MA+ GC + + ++ R G
Sbjct: 413 SNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNG 446
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 127/310 (40%), Gaps = 41/310 (13%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
EPD++ Y+ ++N + K++ + G KP+ Y ++ +
Sbjct: 79 EPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY------------STIIDS 126
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
++ I EA+ + M RG+ Y + CN GR +A + +++ R+ P
Sbjct: 127 LCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE-RNVMP 185
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+TF L+ G I + +F+ M + EPN+ T NA++ Y +A++LF
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245
Query: 490 EETTRANSS----GYTFL------SG--DGA----------PLKPDEYTYSSMLEASATA 527
R + Y L SG D A L PD TYS++++
Sbjct: 246 NIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQD 305
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL--LEAGEIPHPL 585
+ + + + + M G D ++ +L + G L+ AF+ L ++ +I +
Sbjct: 306 GRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGH---LDEAFELLKAMQESKIEPNI 362
Query: 586 FFTEMLIQAI 595
F +LIQ +
Sbjct: 363 FIYTILIQGM 372
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 121/326 (37%), Gaps = 41/326 (12%)
Query: 107 NLKREN--LRELKEMFEKDL-------NWVLDDDVQLGSDYFAKNV-EWHPEKRWRSEAE 156
NL R N K+M E+++ N ++D + G A+ V E EK
Sbjct: 164 NLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVN 223
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
L+D + + K IM + G + L+KG G +A +L
Sbjct: 224 TYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAE- 282
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
+ K Y+ L+ + GRP +A ++ M L PD+ Y V L +
Sbjct: 283 --MSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEM-RSYGLLPDLMTYSIVLDGLCK 339
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G L E +L++ M++ +EP++ +Y ++ + + +
Sbjct: 340 QGHLDEAFELLKAMQESK---------------IEPNIFIYTILIQGMCNFGKLEAAREL 384
Query: 337 FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
F L G++P TY V++ + G NEA R+M G + +
Sbjct: 385 FSNLFVKGIQPDVVTY------------TVMISGLLKGGLSNEACELFRDMAVHGCLPNS 432
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKI 422
Y + NG +A ++E++
Sbjct: 433 CTYNVIIQGFLRNGDTSNAGRLIEEM 458
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 126/297 (42%), Gaps = 47/297 (15%)
Query: 303 RKNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
RK WD ++ + D++ YN +++A +K + QL ++ P+
Sbjct: 139 RKQWDSIISICRWILLRSSFKQDVICYNLLIDAFGQKFLYKEAESTYLQLLEARCIPNED 198
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY L L++A+ G + +A A M+ G+ +A VY L G
Sbjct: 199 TYAL------------LIKAYCLSGLLEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGG 246
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
A + ++K KP T+T LI G + +F M H C+PNI T
Sbjct: 247 NPNKAEEIFLRMKR-DGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNICTY 305
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
A++ ++R + KA+E+FE+ A L+PD Y+Y++++EA + A
Sbjct: 306 TALVNAFAREGLCEKAEEVFEQMQEAG-------------LEPDVYSYNALMEAYSRAG- 351
Query: 530 WEYFEY----VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
F Y ++ M GC+ D+ + L+ RAG + E F+ + G P
Sbjct: 352 ---FPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITP 405
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 118/276 (42%), Gaps = 36/276 (13%)
Query: 219 LKDKRD--LKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLG 275
L+ KRD S YT L+ + GK G+ AL++FN ML C P+I Y ++
Sbjct: 256 LRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCK--PNICTYTALVNAFA 313
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
+ GL ++ ++ E+M++ LEPD+ YNA++ A + G
Sbjct: 314 REGLCEKAEEVFEQMQEAG---------------LEPDVYSYNALMEAYSRAGFPYGAAE 358
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+F ++ G +P A+Y +LV A+ G +N+A A +M++ G+ T
Sbjct: 359 IFSLMQHMGCEPDRASY------------NILVDAYGRAGFLNDAEAVFEDMKRVGITPT 406
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKI--KSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
+ L G ++ ++ L+ + + L G +++ ++
Sbjct: 407 MKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLT 466
Query: 454 IFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+ ++ CE +I T N ++ Y + K + LF
Sbjct: 467 VMEN--GSCEADISTYNILINRYGQAGFIDKMEGLF 500
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 106/287 (36%), Gaps = 38/287 (13%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-------- 361
L VVYN+ +N + +F ++++ G KPS TY + + Y +
Sbjct: 228 LPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGKDGKSFMAL 287
Query: 362 ---------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
C LV AF EG +A M++ G+ Y L
Sbjct: 288 KVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAY 347
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 465
G A + ++ + +P ++ L+ + G ++D ++F+ MK P
Sbjct: 348 SRAGFPYGAAEIFSLMQHM-GCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPT 406
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ + +L +S+ SK +++ + ++ LK D + +SML
Sbjct: 407 MKSHMVLLSAFSKTGNVSKCEDILNQMCKSG-------------LKLDTFVLNSMLNLYG 453
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
Q+ E V M C+ D + + L+ +AG +E F
Sbjct: 454 RLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFIDKMEGLF 500
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 187/496 (37%), Gaps = 61/496 (12%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
+LL GL D +AM VL + + + + Y LL L R EAL + ++M
Sbjct: 134 QLLNGLCDGKRVGEAMDVL--LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMM 191
Query: 255 LED----CNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWD 307
+D C P++ +Y +V T GQV KP N+ + D
Sbjct: 192 ADDQVWSCP--PNVVSYSTVINGFFTEGQV--------------DKP----YNLFLEMMD 231
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
+ PD+V Y V++ + + VF+Q+ +G+KP+ TY L
Sbjct: 232 RGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTY------------NCL 279
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
+ + GK E V + M G Y L LC NGR ++A + + +
Sbjct: 280 IHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIG-KG 338
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
KP T+ ++ G + + + M + PN N Y++ + KA
Sbjct: 339 IKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAM 398
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
++F + + L PD +Y ++++A + + E + M G
Sbjct: 399 DIFNKMRQQG-------------LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVT 445
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
D + L+ K +E F +L G P+ +FF +L + + L
Sbjct: 446 PDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRL 505
Query: 607 INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 666
++++ + L + + + D+ KLL + + + + L LH
Sbjct: 506 VDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTL---LHG 562
Query: 667 LCRSEKERDLSSSAHF 682
C++ R S+ +HF
Sbjct: 563 YCKA--GRIDSAYSHF 576
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/387 (19%), Positives = 151/387 (39%), Gaps = 58/387 (14%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT ++ L KA A +F M+++ + P+I Y+ + +G KE+V+++E M
Sbjct: 241 YTTVIDGLCKAQLFDRAEAVFQQMIDN-GVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEM 299
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K P+ Y ++LN + + + + F + G+KPS
Sbjct: 300 SAGGPK---------------PNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVT 344
Query: 351 TYGLAMESY-----------------------RRCLLKVLVRAFWEEGKINEAVAAVRNM 387
TYG+ + Y + + A+ + G I++A+ M
Sbjct: 345 TYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKM 404
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI--ISSMDG 445
Q+G+ A Y L LC GR DA + ++ + P + F+ L+ + ++D
Sbjct: 405 RQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMIN-EGVTPDIVVFSSLVYGLCTVDK 463
Query: 446 -GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+++ F+ + PNI N +L + + + L + S
Sbjct: 464 WEKVEELF--FEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVD-------------S 508
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+ ++PD +Y+++++ A + + +GM G + D + LL +AG+
Sbjct: 509 IECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGR 568
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEML 591
F +L G P + + +L
Sbjct: 569 IDSAYSHFRKMLSNGITPGVVTYNTIL 595
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 86/440 (19%), Positives = 156/440 (35%), Gaps = 87/440 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G+ +A +L+ + + K D F Y LL KAGR A F ML
Sbjct: 524 LIDGHCLAGTIDEASKLLEGMVSVGLKPD---SFSYNTLLHGYCKAGRIDSAYSHFRKML 580
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + P + Y+++ L Q E +L M +K WD +
Sbjct: 581 SN-GITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK---------WD------IY 624
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-------------- 361
YN +LN S+ +F+ L GL+ + T+ + + + +
Sbjct: 625 TYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAI 684
Query: 362 ---------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
+++V EEG + E + ME+ G + + L L + G
Sbjct: 685 PANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 744
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG-------------------------- 446
A + K+ S +E + T ++IS
Sbjct: 745 SRAGAYLSKLDERNFS--VEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIK 802
Query: 447 ---HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
IDD S+F+ M P++ T N +L + FS+AKEL +
Sbjct: 803 KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKEL-------------Y 849
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
LS + + + YTY+ +L ++ + +++ + G QL+ ++ +
Sbjct: 850 LSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKG 909
Query: 563 GKCHLLEHAFDSLLEAGEIP 582
G+ F ++ G +P
Sbjct: 910 GRKEDAMDLFAAIPANGLVP 929
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 157/371 (42%), Gaps = 45/371 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y KL++ L GR H+ + +F ++D PD+ +++ V + +VG +++ ++L+E
Sbjct: 214 YAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVE 273
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL-KP 347
RM + PD V +N +++ +++ V ++L++ G+ P
Sbjct: 274 RMNEFGC---------------SPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMP 318
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ T+ + Y + GK+ +A+A +M G++ Y L
Sbjct: 319 NVVTFTSVISGY------------CKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYG 366
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
G A+ V +++ LR P +TF+ LI G +DD + I+ M H +PN+
Sbjct: 367 KVGDLGSAVEVYQQMTRLR-CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNV 425
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T + ++ + + +A L E L D + P + Y+ +++
Sbjct: 426 YTFSIIIHSLCKQNRSDEAIRLLNELN---------LRPD---IAPQAFIYNPVIDVLCK 473
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL- 585
+ + + KGM GC+ D+ + L++ + F ++EAG P +
Sbjct: 474 CGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSIT 533
Query: 586 --FFTEMLIQA 594
F L++A
Sbjct: 534 VNCFISCLLKA 544
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 160/378 (42%), Gaps = 50/378 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAIL 238
M+Q G+ E L+ G W A +L + G+K S +V++++LA
Sbjct: 325 MSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK-----PSSYVFSRILAGF 379
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
G +A + M + + PD Y+ + T G+ L + +MR++
Sbjct: 380 RDRGDWQKAFAVLREM-QASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEG---- 434
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
+EPD+V +N +++A + +F+++R+S P TY
Sbjct: 435 -----------IEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTY------ 477
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
+++ E+ A + M+++G+V Y L +GR+++A+
Sbjct: 478 ------NIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDC 531
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYS 477
+E +K+ KP + L+ + G D +++ + MK D E +I +N+++ +
Sbjct: 532 IEAMKA-DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFG 590
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+ +A + + F+ +G L+PD TY+++++A Q++ +Y
Sbjct: 591 EDRRVVEAFSVLQ-----------FMRENG--LRPDVITYTTLMKALIRVEQFDKVPVIY 637
Query: 538 KGMALSGCQLDQTKHAWL 555
+ M SGC D+ A L
Sbjct: 638 EEMITSGCAPDRKARAML 655
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 138/330 (41%), Gaps = 47/330 (14%)
Query: 172 AKNWKFVRI----MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
A W+ RI M G+ + ++L G D+G W++A +VL + + D
Sbjct: 347 AGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPD--- 403
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y ++ GK A+ FN M E+ + PD+ ++++ + G +L
Sbjct: 404 RHFYNVMIDTFGKYNCLGHAMDAFNKMREE-GIEPDVVTWNTLIDAHCKGGRHDRAAELF 462
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E MR+ P YN ++N W+GV + ++++ GL P
Sbjct: 463 EEMRESNCP---------------PGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVP 507
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ TY LV + G+ EA+ + M+ G+ + ++Y+ L
Sbjct: 508 NIITY------------TTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYA 555
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD-----CISIFQHMKDH- 461
G A+ VV+ +K + LE++ L+++S+ +D S+ Q M+++
Sbjct: 556 QRGLADHALNVVKAMK----ADGLEVSI--LVLNSLINAFGEDRRVVEAFSVLQFMRENG 609
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
P++ T ++K R + F K ++EE
Sbjct: 610 LRPDVITYTTLMKALIRVEQFDKVPVIYEE 639
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 124/307 (40%), Gaps = 37/307 (12%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++P YNA+L V K V ++ + G+ P ATY L +++Y R
Sbjct: 295 IKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRA------- 347
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
WE +I ++ ME GV ++ V+ + + G WQ A V+ ++++ +
Sbjct: 348 GRWESARI-----LLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQA-SGVR 401
Query: 430 PLEITFTGLIISSMDG----GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
P + F ++I + GH D F M++ EP++ T N ++ + + +
Sbjct: 402 P-DRHFYNVMIDTFGKYNCLGHAMDA---FNKMREEGIEPDVVTWNTLIDAHCKGGRHDR 457
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A ELFEE +N P TY+ M+ WE E + M G
Sbjct: 458 AAELFEEMRESNC-------------PPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQG 504
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKA 603
+ + L+ R+G+ +++ G P P + L+ A Q + A
Sbjct: 505 LVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMY-HALVNAYAQRGLADHA 563
Query: 604 VALINAM 610
+ ++ AM
Sbjct: 564 LNVVKAM 570
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 132/340 (38%), Gaps = 53/340 (15%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
T L++ LG AGR EA +F + P AY+++ ++G LK ++++ M
Sbjct: 267 TALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMS 326
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
Q + PD Y+ +++A + +W+ + K++ G+KPS+
Sbjct: 327 QCG---------------VAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYV 371
Query: 352 YGLAMESYR-----------------------RCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ + +R R V++ F + + A+ A M
Sbjct: 372 FSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMR 431
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
+ G+ + L C GR A + E+++ + P T+ +I + H
Sbjct: 432 EEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRE-SNCPPGTTTYNIMINLLGEQEHW 490
Query: 449 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
+ ++ MK+ PNI T ++ VY R+ + +A + E + DG
Sbjct: 491 EGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEA-----------MKADG 539
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
LKP Y +++ A A ++ V K M G ++
Sbjct: 540 --LKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEV 577
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 144/365 (39%), Gaps = 43/365 (11%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
R EA+ + + M+E PD ++++ L E V LI+RM +
Sbjct: 166 RISEAVALVDQMVE-MGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGC------- 217
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
+PDL Y V+N + K++ K ++ + Y
Sbjct: 218 --------QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIY---------- 259
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
++ + +++A ME +G+ Y L CLCN GRW DA ++ +
Sbjct: 260 --NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDM 317
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 481
R P +TF LI + G + + +F M + +PNI T N+++ + +D
Sbjct: 318 IE-RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 376
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
+A+++F + PD TY+++++ A + E +++ M+
Sbjct: 377 LDEAQQIFTLMVSKDC-------------LPDVVTYNTLIKGFCKAKRVEEGMELFREMS 423
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 601
G + + L+ +AG C + + F ++ G P + ++ +L E
Sbjct: 424 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 483
Query: 602 KAVAL 606
KA+ +
Sbjct: 484 KALVV 488
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 131/355 (36%), Gaps = 78/355 (21%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L++ L GR +A R+ + M+E + P++ ++S+ + G L E KL +
Sbjct: 292 FTYNSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFNSLIDAFAKEGKLIEAEKLFD 350
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M Q+ ++P++V YN+++N + +F + P
Sbjct: 351 EMIQRS---------------IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 395
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY L++ F + ++ E + R M QRG+VG
Sbjct: 396 VVTY------------NTLIKGFCKAKRVEEGMELFREMSQRGLVGNT------------ 431
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
+T+ LI G D IF+ M D P+I
Sbjct: 432 ------------------------VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 467
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T + +L + KA +FE ++ ++P+ YTY+ M+E A
Sbjct: 468 TYSILLDGLCKYGKLEKALVVFEYLQKSK-------------MEPNIYTYNIMIEGMCKA 514
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ E ++ ++L G + + + ++ R G + F + E G +P
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 569
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 163/398 (40%), Gaps = 46/398 (11%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+++D L + + K K R M G+ L+ GL G R+A+++ D +
Sbjct: 84 LVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQ 143
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K ++ Y L+ + G EA R F+ M+ + + PD+ + ++ L + G
Sbjct: 144 GIKANV---ITYNSLIHASCRFGLWKEATRTFSQMVGE-GILPDVVTFTTLIDHLSKKGK 199
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
++E K+ E M ++ P++V YN++LN HQ +F+
Sbjct: 200 VQEAYKIFELMIKQGEA---------------PNIVTYNSLLNGLCLHHQMDHAVRLFEV 244
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ + G+K +Y L+ + GK EA+ R M+ + + + Y
Sbjct: 245 MVERGIKIDVISY------------NTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTY 292
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
L L NGR + A + ++ S L+ T+T L+ G I++ I +F+ +K
Sbjct: 293 TILLKALYQNGRIRTAKELFNNMQICGQSPSLD-TYTVLLDGLCKNGCIEEAIDVFRSLK 351
Query: 460 D-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
+P+I + ++ + + A E+F+E L P+ TY+
Sbjct: 352 SIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVG-------------LVPNIVTYN 398
Query: 519 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
M+ + E ++ M SGC+ D+ +++
Sbjct: 399 IMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFII 436
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 106/256 (41%), Gaps = 27/256 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ D+++Y ++NA + Q + + +++ + TYGL ++S
Sbjct: 40 FQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDS----------- 88
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
++G + + R M G+ VY L LC G+ ++A+ + +++ S + K
Sbjct: 89 -LCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVS-QGIK 146
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
IT+ LI +S G + F M + P++ T ++ S+ +A ++
Sbjct: 147 ANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKI 206
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
FE + + P+ TY+S+L HQ ++ +++ M G ++D
Sbjct: 207 FELMIKQGEA-------------PNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKID 253
Query: 549 QTKHAWLLVEASRAGK 564
+ L+ +GK
Sbjct: 254 VISYNTLINGYCTSGK 269
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 145/361 (40%), Gaps = 56/361 (15%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+R + Y ++A L KA +A+ + M++ + PD Y+S+ G
Sbjct: 116 DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS-GVMPDCMTYNSIVHGFCSSGQP 174
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
KE + +++MR +EPD+V YN++++ + + +F +
Sbjct: 175 KEAIVFLKKMRSDG---------------VEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 219
Query: 341 RKSGLKPSAATYGLAMESY-----------------------RRCLLKVLVRAFWEEGKI 377
K GLKP TYG ++ Y + +LV A+ ++ K+
Sbjct: 220 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKV 279
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
EA+ M Q+G+ A Y + LC +GR +DAML E++ S P I +
Sbjct: 280 EEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS-PGNIVYNS 338
Query: 438 LIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
LI + + M D C I N+++ + + ++++LF+ R
Sbjct: 339 LIHGLCTCNKWERAEELILEMLDRGICLNTI-FFNSIIDSHCKEGRVIESEKLFDLMVRI 397
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
+KPD TYS++++ A + + + M G + D ++ L
Sbjct: 398 G-------------VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTL 444
Query: 556 L 556
+
Sbjct: 445 I 445
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/414 (20%), Positives = 158/414 (38%), Gaps = 52/414 (12%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLL 280
+R + F Y LL L R EAL + ++M +D + PD+ +Y +V G
Sbjct: 45 RRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVI-----NGFF 99
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
KE + + + + D + P++V YN+++ A + V +
Sbjct: 100 KE----------GDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 149
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
KSG+ P TY +V F G+ EA+ ++ M GV Y
Sbjct: 150 VKSGVMPDCMTY------------NSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYN 197
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-K 459
L LC NGR +A + + + R KP T+ L+ G + + + M +
Sbjct: 198 SLMDYLCKNGRCTEARKIFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 256
Query: 460 DHCEPNIGTVNAMLKVYSRND-------MFSKAKE---------------LFEETTRANS 497
+ PN + ++ Y++ + +FSK ++ + ++ R
Sbjct: 257 NGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED 316
Query: 498 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 557
+ F L P Y+S++ T ++WE E + M G L+ ++
Sbjct: 317 AMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 376
Query: 558 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ G+ E FD ++ G P + ++ ++ + ++A L+ +M
Sbjct: 377 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 430
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/420 (20%), Positives = 168/420 (40%), Gaps = 57/420 (13%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L + + K + + M +SG+M ++ G G ++A+ L +
Sbjct: 129 IIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDG 188
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D+ + Y L+ L K GR EA +IF+ M + L P+I Y ++ G L
Sbjct: 189 VEPDVVT---YNSLMDYLCKNGRCTEARKIFDSMTKR-GLKPEITTYGTLLQGYATKGAL 244
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E+ L++ M + + P+ V++ ++ A + + VF ++
Sbjct: 245 VEMHGLLDLMVRNG---------------IHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 289
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
R+ GL P+A TYG ++ + G++ +A+ M G+ VY
Sbjct: 290 RQQGLNPNAVTYG------------AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 337
Query: 401 ELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 458
L LC +W+ A L++E + R I F +I S G + + +F M
Sbjct: 338 SLIHGLCTCNKWERAEELILEMLD--RGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 395
Query: 459 KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL----------------------FEETTRAN 496
+ +P+I T + ++ Y +A +L + + +R
Sbjct: 396 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMK 455
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ F + + + PD TY+ +L+ + + +Y G+ SG QL+ + + +L
Sbjct: 456 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIIL 515
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 136/369 (36%), Gaps = 79/369 (21%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL W +A + + + D+ + + ++ K GR E+ ++F+LM+
Sbjct: 339 LIHGLCTCNKWERAE---ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 395
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PDI Y ++ G + E KL+ M K PD V
Sbjct: 396 R-IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK---------------PDCV 439
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y+ ++N + K +F+++ SG+ P TY ++++ ++
Sbjct: 440 TYSTLINGYCKISRMKDALVLFREMESSGVSPDIITY------------NIILQGLFQTR 487
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ A + + G S Y + LC N DA+ + + + L K TF
Sbjct: 488 RTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNL-CLMDLKLEARTF 546
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
+I +A+LKV RND +AK+LF
Sbjct: 547 NIMI------------------------------DALLKV-GRND---EAKDLF------ 566
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
S +G L P+ +TY M E E + ++ M +GC +D ++
Sbjct: 567 -----VAFSSNG--LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 619
Query: 556 LVEASRAGK 564
+ E + G+
Sbjct: 620 VRELLQRGE 628
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 158/373 (42%), Gaps = 46/373 (12%)
Query: 185 GLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
G F + L+ GL G R A+ +L V G + ++ +Y ++ + K
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV---VMYNTIIDSMCKVKLV 241
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
+EA +F+ M+ + PD+ Y ++ +G LK+ + L +M ++N
Sbjct: 242 NEAFDLFSEMVSK-GISPDVVTYSALISGFCILGKLKDAIDLFNKMI------LEN---- 290
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL 364
++PD+ +N ++NA + K VF + K G+KP+ TY M+ Y CL+
Sbjct: 291 -----IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY--CLV 343
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
K ++N+A + M Q GV Y + C ++ +AM + +++
Sbjct: 344 K----------EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHR 393
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 483
++ P +T++ LI G I + + M D PNI T N++L +
Sbjct: 394 -KNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVD 452
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
KA L T+ G+ +PD TYS +++ + + E V++ + +
Sbjct: 453 KAIALL---TKFKDKGF----------QPDISTYSILIKGLCQSGKLEDARKVFEDLLVK 499
Query: 544 GCQLDQTKHAWLL 556
G LD + ++
Sbjct: 500 GYNLDVYAYTIMI 512
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/350 (19%), Positives = 136/350 (38%), Gaps = 42/350 (12%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
+ +Y S + T + + V L R+ + R P E +N +L
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRL----------LRRNTTPPAFE-----FNKILG 93
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA 382
+ V S + V ++ +++ G+KP+ +L+ F + G I A +
Sbjct: 94 SLVKSKHYHTVLYLSQKMEFRGIKPNLVN------------CNILINCFCQLGLIPFAFS 141
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 442
+ + G V + L+ LC G+ Q A L +K+ +L +I++ LI
Sbjct: 142 VFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFD-QISYGTLIHGL 200
Query: 443 MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
G + + Q + + +PN+ N ++ + + ++A +LF E S G
Sbjct: 201 CKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMV---SKG-- 255
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
+ PD TYS+++ + + ++ M L + D L+ +
Sbjct: 256 --------ISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCK 307
Query: 562 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
GK + FD +++ G P+ + + ++ + KA ++ N MA
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 119/296 (40%), Gaps = 27/296 (9%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
D + Y +++ + + + +++ + ++P+ Y ++S C +K+
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS--MCKVKL------ 240
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
+NEA M +G+ Y L C G+ +DA+ + K+ L + KP
Sbjct: 241 ----VNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM-ILENIKPDV 295
Query: 433 ITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
TF L+ + G + + ++F MK +PN T N+++ Y +KAK +F
Sbjct: 296 YTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNT 355
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
+ + PD +YS M+ +++ ++K M D
Sbjct: 356 MAQGG-------------VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 607
++ L+ S++G+ D + + G P+ + +L +KA+AL+
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALL 458
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 28/169 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L+ L K+GR AL++ + M D + P+I Y+S+ L + + + + L+ +
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQM-HDRGVPPNICTYNSILDALCKTHQVDKAIALLTKF 461
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ K +PD+ Y+ ++ S + + VF+ L G
Sbjct: 462 KDKG---------------FQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKG------ 500
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
Y L + +Y ++++ F EG NEA+A + ME G + A Y
Sbjct: 501 -YNLDVYAYT-----IMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 45/271 (16%), Positives = 106/271 (39%), Gaps = 38/271 (14%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-----GLAMES------ 358
++P+LV N ++N F VF ++ K G P T+ GL ++
Sbjct: 116 IKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAF 175
Query: 359 ------------YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
+ + L+ + G+ A+ ++ ++ V +Y + +
Sbjct: 176 LFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSM 235
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 465
C +A + ++ S + P +T++ LI G + D I +F M ++ +P+
Sbjct: 236 CKVKLVNEAFDLFSEMVS-KGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPD 294
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T N ++ + ++ + K +F+ + +KP+ TY+S+++
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQG-------------IKPNFVTYNSLMDGYC 341
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ + ++ MA G D ++ ++
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPDIQSYSIMI 372
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 141/347 (40%), Gaps = 48/347 (13%)
Query: 304 KNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K WD ++ PD++ YN +++A +K + +L ++ P+ T
Sbjct: 76 KQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDT 135
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y L L++A+ G + +A A M + G +A VY L G
Sbjct: 136 YAL------------LLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGD 183
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
Q A+ + E++K R +P T+T LI + +F M+ C+PNI T
Sbjct: 184 TQKAVEIFERMKRDR-CQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFT 242
Query: 471 AMLKVYSRNDMFSKAKELFEETTRA----------------NSSGYTFLSGDGAPL---- 510
A++ ++R + KA+E+FE+ A + +G+ + + + L
Sbjct: 243 ALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHM 302
Query: 511 --KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
+PD +Y+ M++A A E + V++ M G H LL SRAGK
Sbjct: 303 GCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKC 362
Query: 569 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
E + + ++G P ML +EK ++ AM P+
Sbjct: 363 EEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPY 409
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 171/431 (39%), Gaps = 67/431 (15%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML- 255
+ GL G ++A+ + + +K R S YT L+ + GKA + + AL++F+ M
Sbjct: 175 IDGLMKGGDTQKAVEIFER---MKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRS 231
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ C P+I + ++ + GL ++ ++ E++++ LEPD+
Sbjct: 232 QKCK--PNICTFTALVNAFAREGLCEKAEEIFEQLQEAG---------------LEPDVY 274
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YNA++ A + G +F ++ G +P A+Y + +++Y R G
Sbjct: 275 AYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA------------G 322
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+A A M++ G+ T + L G+ +V ++ KP
Sbjct: 323 LHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHK-SGIKPDTFVL 381
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
++ G + + M+ P +I T N ++ +Y R F++ +ELF
Sbjct: 382 NSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPA 441
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD--QTKH 552
N L PD T++S + A + Q+ V++ M +GC D K+
Sbjct: 442 RN-------------LIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKN 488
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 612
L V A S L P P T ++ +I++S ++
Sbjct: 489 VLLKVAIFMA-----------SFLVGSASPSPFSPTAPILGSILRS------LGFRELSV 531
Query: 613 APFHITERQWT 623
A + +TE W+
Sbjct: 532 AAYSLTESPWS 542
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 111/297 (37%), Gaps = 38/297 (12%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-------- 361
P VVYNA ++ + + +F+++++ +PS ATY + + Y +
Sbjct: 164 FPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASKSYMAL 223
Query: 362 ---------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
C LV AF EG +A +++ G+ Y L
Sbjct: 224 KVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAY 283
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 465
G A + ++ + +P ++ ++ + G +D ++F+ MK P
Sbjct: 284 SRAGFPYGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPT 342
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ + +L YSR +K +E+ + ++ +KPD + +SML
Sbjct: 343 MKSHMLLLSAYSRAGKVAKCEEIVNQMHKSG-------------IKPDTFVLNSMLNLYG 389
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
Q+E E V M D + + L+ RAG +E F SL IP
Sbjct: 390 RLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIP 446
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 132/304 (43%), Gaps = 33/304 (10%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
EPD+V + ++LN + ++F ++ + G +P+ Y ++
Sbjct: 148 EPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIY------------NTIIDG 195
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ +++ A+ + ME G+ A Y L LCN+GRW DA +V + R P
Sbjct: 196 LCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTK-REIYP 254
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAM---LKVYSRNDMFSKAK 486
TF LI + + G I + +++ M + +P+I T + + L +YSR D +A+
Sbjct: 255 DVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD---EAE 311
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
++F F+ G PD TYS ++ + + E+ ++ M+ G
Sbjct: 312 QMF-----------GFMVSKGC--FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
+ + L+ RAGK ++ E F ++ G P+ + + +L EKA+ +
Sbjct: 359 RNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 607 INAM 610
+ M
Sbjct: 419 LADM 422
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 137/366 (37%), Gaps = 49/366 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+ LL + R ++AL +F+ M+E P++ Y+++ L + + + L+ RM
Sbjct: 154 FGSLLNGFCRGDRIYDALYMFDRMVEM-GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ PD V YN++++ S +W + + K + P
Sbjct: 213 EVDG---------------IRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVF 257
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
T+ L+ A +EG+I+EA M +R + Y L LC
Sbjct: 258 TF------------NALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYS 305
Query: 411 RWQDAMLVVEKIKSLRHSK---PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
R +A E++ SK P +T++ LI ++ + +F M N
Sbjct: 306 RLDEA----EQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T +++ Y R + A+E+F+ G P P+ TY+ +L
Sbjct: 362 VTYTVLIQGYCRAGKLNVAEEIFKWMVFC-----------GVP--PNIITYNVLLHGLCD 408
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
+ E + M SG D + ++ +AG+ + SL G P
Sbjct: 409 NGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWT 468
Query: 587 FTEMLI 592
+T M++
Sbjct: 469 YTAMML 474
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 117/295 (39%), Gaps = 46/295 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL-KSRFVYTKLLAILGKAGRPHEALRIFNLM 254
L+ GL + G W A ++ + KR++ F + L+ K GR EA ++ M
Sbjct: 227 LISGLCNSGRWDDATRMVSCM----TKREIYPDVFTFNALIDACVKEGRISEAEELYEEM 282
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ +L PDI Y + L L E ++ M K PD+
Sbjct: 283 IRR-SLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGC---------------FPDV 326
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR------------- 361
V Y+ ++N S + + +F ++ + G+ + TY + ++ Y R
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKW 386
Query: 362 ---C-------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
C VL+ + GKI +A+ + +M++ G+ Y + +C G
Sbjct: 387 MVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGE 446
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 465
DA + + +L+ P T+T +++ G + ++F+ MK D PN
Sbjct: 447 VADAWDLYCSL-NLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 35/266 (13%)
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAI------LGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
D V L+ +K++ + ++A L KAGR EA +IF L+D L PD Y
Sbjct: 450 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF-YGLKDIGLVPDSVTY 508
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+ + +VG + E +KL+ M + EPD++V N+++N +
Sbjct: 509 NMMMKCYSKVGEIDEAIKLLSEMVEN---------------CCEPDVIVVNSLINTLYKA 553
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ + +F ++++ LKP+ TY L+ + GKI EA+ M
Sbjct: 554 DRVDEAWKMFMRMKEMKLKPTVVTY------------NTLLAGLGKNGKIQEAIELFEGM 601
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
Q+G + L CLC N A+ ++ K+ + P T+ +I + G
Sbjct: 602 VQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM-GCVPDVFTYNTIIFGLVKNGQ 660
Query: 448 IDDCISIFQHMKDHCEPNIGTVNAML 473
+ + + F MK P+ T+ +L
Sbjct: 661 VKEAMCFFHQMKKLVYPDFVTLCTLL 686
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/470 (18%), Positives = 176/470 (37%), Gaps = 84/470 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GLG + M +L + L K ++ + +T + +LG+AG+ +EA I M
Sbjct: 231 LMVGLGKRRDIESVMGLLKEMETLGLKPNV---YTFTICIRVLGRAGKINEAYEILKRM- 286
Query: 256 EDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPSK--RIKNMHR----KNW 306
+D PD+ Y + T ++ KE+ ++ R KP + I + R ++
Sbjct: 287 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDL 346
Query: 307 DPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
D V + PD+V + +++A + + F +R G+ P+ TY
Sbjct: 347 DSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTY--- 403
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+ ++++A+ NME GV TA Y +G A
Sbjct: 404 ---------NTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 454
Query: 416 MLVVEKIKSL----------------------RHSK------------PLEITFTGLIIS 441
+ EK+K+ R +K P +T+ ++
Sbjct: 455 LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 514
Query: 442 SMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
G ID+ I + M ++C EP++ VN+++ + D +A ++F
Sbjct: 515 YSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK---- 570
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
LKP TY+++L + + +++GM GC + L
Sbjct: 571 ---------LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC 621
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ + L +++ G +P + ++ + ++A+ + M
Sbjct: 622 KNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 671
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 138/338 (40%), Gaps = 52/338 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L +A A +F L +++ PD+A Y+ + G+ G + EL ++ + M
Sbjct: 790 YNLLIGGLLEADMIEIAQDVF-LQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEM 848
Query: 291 RQ---KPSKRIKNM------HRKNWDPVLE------------PDLVVYNAVLNACVPSHQ 329
+P+ N+ N D L+ P Y +++ S +
Sbjct: 849 SAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 908
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+F+ + G +P+ A Y +L+ F + G+ + A A + M +
Sbjct: 909 LYEAKQLFEGMSDYGCRPNCAIY------------NILINGFGKAGEADAACALFKRMVK 956
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH-I 448
GV Y L CLC GR + + ++K P ++ LII+ + H +
Sbjct: 957 EGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKE-SGLNP-DVVCYNLIINGLGKFHRL 1014
Query: 449 DDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
++ + +F MK P++ T N+++ M +A +++ E RA
Sbjct: 1015 EEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG---------- 1064
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
L+P+ +T+++++ + + + E+ VY+ M G
Sbjct: 1065 ---LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1099
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 105/508 (20%), Positives = 193/508 (37%), Gaps = 68/508 (13%)
Query: 132 VQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEG 191
V + S F+ ++ K S +E RVL +S + + F + S L+ T
Sbjct: 65 VSMKSSGFSGSMIRKSSKPDLSSSEVARVL---MSFPDTDSSFSYFKSVAGNSNLVHTTE 121
Query: 192 QMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
+L+ L G + V D + KRD + K L++ G + ALR
Sbjct: 122 TCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALR-- 179
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
+ + + +Y+ GL+ L+K + ++R+
Sbjct: 180 --KMREFGFVLNAYSYN---------GLIHLLLK------SRFCTEAMEVYRRMILDGFR 222
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P L Y++++ + V + K++ GLKP+ T+ + +R
Sbjct: 223 PSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTF------------TICIRVL 270
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
GKINEA ++ M+ G Y L LC + A V K+K+ RH KP
Sbjct: 271 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRH-KPD 329
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT----VNAMLKVYSRNDMFSKAK 486
+T+ L+ D +D + M KD P++ T V+A+ K + + F+K
Sbjct: 330 RVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLD 389
Query: 487 ELFEETTRANSSGY-TFLSG-----------------DGAPLKPDEYTYSSMLE----AS 524
+ ++ N Y T + G + +KP YTY ++ +
Sbjct: 390 VMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSG 449
Query: 525 ATAHQWEYFEYV-YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
+ E FE + KG+A + + + L ++AG+ + F L + G +P
Sbjct: 450 DSVSALETFEKMKTKGIAPNIVACNAS-----LYSLAKAGRDREAKQIFYGLKDIGLVPD 504
Query: 584 PLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ + M+ ++A+ L++ M
Sbjct: 505 SVTYNMMMKCYSKVGEIDEAIKLLSEMV 532
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 102/267 (38%), Gaps = 29/267 (10%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
D ++P L YN ++ + + + VF Q++ +G P ATY +++Y +
Sbjct: 780 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGK----- 834
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
GKI+E + M + + L G DA+ + + S R
Sbjct: 835 -------SGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDR 887
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 485
P T+ LI G + + +F+ M D+ C PN N ++ + + A
Sbjct: 888 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAA 947
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
LF+ + ++PD TYS +++ + + + ++ + SG
Sbjct: 948 CALFKRMVKEG-------------VRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGL 994
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAF 572
D + ++ + GK H LE A
Sbjct: 995 NPDVVCYNLII---NGLGKFHRLEEAL 1018
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ LGK R EAL +FN M + + PD+ Y+S+ + LG G+++E K+ +
Sbjct: 1001 YNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1060
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ LEP++ +NA++ S + + + V++ + G P+
Sbjct: 1061 QRAG---------------LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1105
Query: 351 TY 352
TY
Sbjct: 1106 TY 1107
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 30/207 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G G A ++ + + DLK+ Y+ L+ L GR E L F L
Sbjct: 934 LINGFGKAGEADAACALFKRMVKEGVRPDLKT---YSVLVDCLCMVGRVDEGLHYFR-EL 989
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ L PD+ Y+ + LG+ L+E + L M++ + PDL
Sbjct: 990 KESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRG--------------ITPDLY 1035
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN+++ + + ++ +++++GL+P+ T+ L+R + G
Sbjct: 1036 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF------------NALIRGYSLSG 1083
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYEL 402
K A A + M G Y +L
Sbjct: 1084 KPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 35/266 (13%)
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAI------LGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
D V L+ +K++ + ++A L KAGR EA +IF L+D L PD Y
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF-YGLKDIGLVPDSVTY 506
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+ + +VG + E +KL+ M + EPD++V N+++N +
Sbjct: 507 NMMMKCYSKVGEIDEAIKLLSEMMENGC---------------EPDVIVVNSLINTLYKA 551
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ + +F ++++ LKP+ TY L+ + GKI EA+ M
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTY------------NTLLAGLGKNGKIQEAIELFEGM 599
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
Q+G + L CLC N A+ ++ K+ + P T+ +I + G
Sbjct: 600 VQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM-GCVPDVFTYNTIIFGLVKNGQ 658
Query: 448 IDDCISIFQHMKDHCEPNIGTVNAML 473
+ + + F MK P+ T+ +L
Sbjct: 659 VKEAMCFFHQMKKLVYPDFVTLCTLL 684
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 96/508 (18%), Positives = 190/508 (37%), Gaps = 84/508 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GLG + M +L + L K ++ + +T + +LG+AG+ +EA I M
Sbjct: 229 LMVGLGKRRDIDSVMGLLKEMETLGLKPNV---YTFTICIRVLGRAGKINEAYEILKRM- 284
Query: 256 EDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLIERMRQKPSK--RIKNMHR----KNW 306
+D PD+ Y + T ++ KE+ + ++ R KP + I + R ++
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 307 DPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
D V + PD+V + +++A + + F +R G+ P+ TY
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTY--- 401
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+ ++++A+ NME GV TA Y +G A
Sbjct: 402 ---------NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 452
Query: 416 MLVVEKIKSL----------------------RHSK------------PLEITFTGLIIS 441
+ EK+K+ R +K P +T+ ++
Sbjct: 453 LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 512
Query: 442 SMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
G ID+ I + + M++ CEP++ VN+++ + D +A ++F
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK---- 568
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
LKP TY+++L + + +++GM GC + L
Sbjct: 569 ---------LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC 619
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 620
+ + L +++ G +P + ++ + ++A+ + M +
Sbjct: 620 KNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVT 679
Query: 621 QWTELFESNEDRISRDKLEKLLNALCNC 648
T L + + D + + N L NC
Sbjct: 680 LCTLLPGVVKASLIEDAYKIITNFLYNC 707
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 135/340 (39%), Gaps = 56/340 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L +A A +F L ++ PD+A Y+ + G+ G + EL +L + M
Sbjct: 788 YNLLIGGLLEADMIEIAQDVF-LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 291 RQKPSKRIKNMHR---------KNWDPVLE------------PDLVVYNAVLNACVPSHQ 329
+ H N D L+ P Y +++ S +
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+F+ + G +P+ A Y +L+ F + G+ + A A + M +
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIY------------NILINGFGKAGEADAACALFKRMVK 954
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGH 447
GV Y L CLC GR + + K L+ S P ++ LII+ + H
Sbjct: 955 EGVRPDLKTYSVLVDCLCMVGRVDEGL---HYFKELKESGLNP-DVVCYNLIINGLGKSH 1010
Query: 448 -IDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+++ + +F MK P++ T N+++ M +A +++ E RA
Sbjct: 1011 RLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG-------- 1062
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
L+P+ +T+++++ + + + E+ VY+ M G
Sbjct: 1063 -----LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1097
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 124/343 (36%), Gaps = 36/343 (10%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
D ++P L YN ++ + + + VF Q++ +G P ATY +++Y +
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGK----- 832
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
GKI+E + M + + L G DA+ + + S R
Sbjct: 833 -------SGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 485
P T+ LI G + + +F+ M D+ C PN N ++ + + A
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 486 KELF----EETTRANSSGYTFL---------SGDG---------APLKPDEYTYSSMLEA 523
LF +E R + Y+ L +G + L PD Y+ ++
Sbjct: 946 CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING 1005
Query: 524 SATAHQWEYFEYVYKGMALS-GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+H+ E ++ M S G D + L++ AG ++ + AG P
Sbjct: 1006 LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065
Query: 583 HPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 625
+ F ++ + E A A+ M F + +L
Sbjct: 1066 NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 127/331 (38%), Gaps = 50/331 (15%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
P L Y++++ V + K++ GLKP+ T+ + +R
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTF------------TICIR 266
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
GKINEA ++ M+ G Y L LC + A V EK+K+ RH K
Sbjct: 267 VLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH-K 325
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT----VNAMLKVYSRNDMFSK 484
P +T+ L+ D +D + M KD P++ T V+A+ K + + F
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 485 AKELFEETTRANSSGY-TFLSG-----------------DGAPLKPDEYTYSSMLE---- 522
+ ++ N Y T + G + +KP YTY ++
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 523 ASATAHQWEYFEYV-YKGMA--LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 579
+ + E FE + KG+A + C L ++AG+ + F L + G
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNAS-------LYSLAKAGRDREAKQIFYGLKDIG 498
Query: 580 EIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+P + + M+ ++A+ L++ M
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ LGK+ R EAL +FN M + PD+ Y+S+ + LG G+++E K+ +
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ LEP++ +NA++ S + + + V++ + G P+
Sbjct: 1059 QRAG---------------LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1103
Query: 351 TY 352
TY
Sbjct: 1104 TY 1105
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 109/516 (21%), Positives = 196/516 (37%), Gaps = 112/516 (21%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL + A+ +LD + + D+ Y LL KAG + +R+++ ++
Sbjct: 199 LMCGLAKQDRLDHALDLLDEMPRSGVQPDV---VCYNALLGGCFKAGEFEKVMRVWDKLV 255
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+D P++A Y+ + L + G KE+ ++ ERM + N L+PD++
Sbjct: 256 KDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERM-------VANN--------LQPDVI 300
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY----------GLAMESYR----- 360
Y +++ S G V+ ++ K+GL AA Y G E+++
Sbjct: 301 TYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSA 360
Query: 361 -----RCL--LKVLVRAFWEEGKINEAV--------------------AAVRNMEQRGVV 393
R L ++++ ++ G ++EA+ + + Q G
Sbjct: 361 GFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFA 420
Query: 394 GTASVYYE----------------LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
A +E + LCN GR DA+ V EK+ KP +
Sbjct: 421 NKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDK-DGCKPNSHIYNA 479
Query: 438 LIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
LI D + I+ M D+ C P + T N ++ + + + +A + E
Sbjct: 480 LISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVE-- 537
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+G+T PD TY S++ + + + ++K + G ++D H L+
Sbjct: 538 -NGFT----------PDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILI 586
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAMAYAPF 615
AGK H F + E P L L+ + ++ Y +KA L
Sbjct: 587 HGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATL--------- 637
Query: 616 HITERQWTELFESN--EDRISRDKLEKLLNALCNCN 649
WT + E D IS + K LC+C+
Sbjct: 638 ------WTSITEDGLEPDIISYNTRIK---GLCSCD 664
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 144/321 (44%), Gaps = 42/321 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++KGL D G +A+ + D + KD + + L+ L + G ++A IF
Sbjct: 374 MIKGLFDSGMVDEAIELWDLLE--KDVACIPDTVTFGTLIHGLCQNGFANKAFTIF---- 427
Query: 256 EDCNLYP---DIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKN--------- 300
E+ + D+ +Y S+ L VG L + VK+ E+M + KP+ I N
Sbjct: 428 EEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQV 487
Query: 301 --------MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
++ K D P ++ YN +++ + +++ V +++ ++G P TY
Sbjct: 488 YRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTY 547
Query: 353 GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
G L+R + + KI++A++ + + +G+ ++ L LC+ G+
Sbjct: 548 G------------SLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 471
+A+ V +K ++ P +T+ L+ + G+ID +++ + +D EP+I + N
Sbjct: 596 DEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNT 655
Query: 472 MLKVYSRNDMFSKAKELFEET 492
+K D + +L +E
Sbjct: 656 RIKGLCSCDRIHEGIQLLDEV 676
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 137/344 (39%), Gaps = 61/344 (17%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y +L L G A+ +F+ L + PD Y ++ L + L + L++ M
Sbjct: 161 YNIVLRSLCARGDLDRAVTLFD-SLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEM 219
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK-SGLKPSA 349
+ ++PD+V YNA+L C + +++ V V+ +L K G +P+
Sbjct: 220 PRSG---------------VQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNL 264
Query: 350 ATYGLAM-------------ESYRRCLLK----------VLVRAFWEEGKINEAVAAVRN 386
ATY + + E + R + +L+ G ++ A
Sbjct: 265 ATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSE 324
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK--IKSLRHSKPLEITFTGLIISSMD 444
+ + G+V A++Y L C GR Q+A + LR+ + I GL D
Sbjct: 325 IIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGL----FD 380
Query: 445 GGHIDDCISIFQHM-KD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
G +D+ I ++ + KD C P+ T ++ +N +KA +FEE A SG
Sbjct: 381 SGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEE---ARVSGKQL 437
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
D ++YSSM+ + VY+ M GC+
Sbjct: 438 ----------DVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCK 471
>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
gi|223945505|gb|ACN26836.1| unknown [Zea mays]
Length = 462
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/391 (20%), Positives = 159/391 (40%), Gaps = 52/391 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+Y+ L+ + GR EAL++ N ML P+ Y++ L G +E+ +LI
Sbjct: 78 IIYSTLVNGFSEHGRVDEALKLLNTML----CRPNTVCYNAALKGLCIAGRWEEVGELIA 133
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +K P+ ++ ++N+ + + V +Q++K G P
Sbjct: 134 EMVRKDCP---------------PNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPD 178
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
+Y ++ F ++ + ++A+ +++M + T S L C LC
Sbjct: 179 VVSYN------------TIISCFSDQARADDALKLLKSMLCKP--DTISFNAVLKC-LCK 223
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
RW DA+ +V K+ + + E+TF LI S G + D I +F+ M K C P+I
Sbjct: 224 AKRWYDAVELVAKMLK-KDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIV 282
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T ++++ +S + A +LF P + D ++Y++ L+ A
Sbjct: 283 TYSSLINGFSEQGLDEMAFDLFR----------------SMPCRADIFSYNATLKGLCMA 326
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
+W+ + M C ++ L+ + G + ++ + + G P +
Sbjct: 327 ARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTY 386
Query: 588 TEMLIQAIVQSNYEKAVALINAMAYAPFHIT 618
++ Q + A+ ++ M P I+
Sbjct: 387 NALINGYSEQGRLDDALKFLSTMPCEPDTIS 417
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 129/325 (39%), Gaps = 52/325 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y +++ R +AL++ ML PD ++++V L + + V+L+ +M
Sbjct: 182 YNTIISCFSDQARADDALKLLKSML----CKPDTISFNAVLKCLCKAKRWYDAVELVAKM 237
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+K RI M +N ++++ + Q K VF+ + K P
Sbjct: 238 LKKDC-RINEM--------------TFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIV 282
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY L+ F E+G A R+M R + + + + LC
Sbjct: 283 TYS------------SLINGFSEQGLDEMAFDLFRSMPCRADIFSYNATLKG---LCMAA 327
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
RW DA ++ + + P E+TF LI S G ++ I +++ M + P+I T
Sbjct: 328 RWDDAGELIADMVT-EDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTY 386
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
NA++ YS A + FLS P +PD +Y+S+L+ A +
Sbjct: 387 NALINGYSEQGRLDDALK--------------FLST--MPCEPDTISYNSILKGLCRAER 430
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAW 554
W+ E + M C ++ +
Sbjct: 431 WKDAEKLVTEMLRKNCTPNEVTFKY 455
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/275 (19%), Positives = 109/275 (39%), Gaps = 40/275 (14%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD YN VL + QW+ + +++ ++ P+ T+ +RAF
Sbjct: 5 PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQ------------IRAF 52
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ G ++ AV + M + G +Y L +GR +A+ ++ + ++
Sbjct: 53 CQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCY 112
Query: 432 EITFTGLIISSM--DGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
GL I+ + G + I + ++ C PN T + ++ +N + A E+
Sbjct: 113 NAALKGLCIAGRWEEVGEL-----IAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVL 167
Query: 490 EETTRAN-----SSGYTFLSG--------DGAPL------KPDEYTYSSMLEASATAHQW 530
E+ + S T +S D L KPD +++++L+ A +W
Sbjct: 168 EQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRW 227
Query: 531 -EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+ E V K M C++++ L+ + G+
Sbjct: 228 YDAVELVAK-MLKKDCRINEMTFNILIDSLCQNGQ 261
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 24/158 (15%)
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
P+ PD YTY+++L+ A QWE E + + M + C ++ A + + G LL
Sbjct: 2 PVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNG---LL 58
Query: 569 EHAFDSLLEA----GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER---- 620
+ A + LLE G P + ++ ++ ++A+ L+N M P +
Sbjct: 59 DRAVE-LLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALK 117
Query: 621 ------QWTELFESNEDRISRD------KLEKLLNALC 646
+W E+ E + + +D L+N+LC
Sbjct: 118 GLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLC 155
>gi|414874000|tpg|DAA52557.1| TPA: hypothetical protein ZEAMMB73_743775 [Zea mays]
Length = 630
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 170/427 (39%), Gaps = 57/427 (13%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
AL I + ++ NL PD Y +V L G ++E V L+ H
Sbjct: 180 ALGILHDVIPAWNLVPDKFTYSTVVSALADAGCVEEAVALV--------------HEMVV 225
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
D V+ + +N VL A + + G +F+ ++ G +A TY + + C
Sbjct: 226 DGVVSAE--AFNPVLKAMLRAGDVNGAVKLFRFMQLKGCTLTAVTYNVLLHGLLLC---- 279
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
G+ A+ +R ME G+V Y + L GR +DA V +++ +
Sbjct: 280 --------GEARAAMNIMRRMENEGIVPGLMTYGAVVDGLVKCGRVEDAWKVAQEMGG-Q 330
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
P E F+ +I G +D + +++ M +PN+ +AM+ ++R+ ++A
Sbjct: 331 GLAPSEFVFSAVITGFCKSGEVDRALMVWETMVAARVKPNVVLYSAMIDGFARSGRMTEA 390
Query: 486 KELFEETTRANS-----------SGYTFLSGDGAPLK-----------PDEYTYSSMLEA 523
++LFEE A GY ++ L P +YS ++
Sbjct: 391 EKLFEEMVDAKCIPNIVTYSSMVRGYFHIANSSRALSTWEEMIKVGCVPTAISYSILISG 450
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
+ + V+K M GC D + ++ +G F+ +L G+
Sbjct: 451 LCDVGRLKDAMMVWKNMIGRGCAPDTIAYTSMMKGLCMSGMVDGGLRLFNDMLAKGDAKP 510
Query: 584 PLFFTEMLIQAIVQSN-YEKAVALINAM---AYAPFHITERQWTELFESNEDRISRDKLE 639
+ +L+ A++++N +A+ L+N M P IT + F E + R+ LE
Sbjct: 511 DVISYNVLLDALIRTNDLPRAMDLLNQMLDQMCDPDTITCNIFLREFGVLEGK-GREFLE 569
Query: 640 KLLNALC 646
L+ LC
Sbjct: 570 GLVMRLC 576
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 132/318 (41%), Gaps = 34/318 (10%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
K R M G T LL GL G R AM+++ ++++ + Y ++
Sbjct: 252 KLFRFMQLKGCTLTAVTYNVLLHGLLLCGEARAAMNIMRR---MENEGIVPGLMTYGAVV 308
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
L K GR +A ++ M L P + +V + G + + + E M +
Sbjct: 309 DGLVKCGRVEDAWKVAQEMGGQ-GLAPSEFVFSAVITGFCKSGEVDRALMVWETMV---A 364
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
R+K P++V+Y+A+++ S + +F+++ + P+ TY
Sbjct: 365 ARVK------------PNVVLYSAMIDGFARSGRMTEAEKLFEEMVDAKCIPNIVTY--- 409
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+VR ++ + A++ M + G V TA Y L LC+ GR +DA
Sbjct: 410 ---------SSMVRGYFHIANSSRALSTWEEMIKVGCVPTAISYSILISGLCDVGRLKDA 460
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAML 473
M+V + + R P I +T ++ G +D + +F M K +P++ + N +L
Sbjct: 461 MMVWKNMIG-RGCAPDTIAYTSMMKGLCMSGMVDGGLRLFNDMLAKGDAKPDVISYNVLL 519
Query: 474 KVYSRNDMFSKAKELFEE 491
R + +A +L +
Sbjct: 520 DALIRTNDLPRAMDLLNQ 537
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/265 (18%), Positives = 106/265 (40%), Gaps = 31/265 (11%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S FV++ ++ K+G AL ++ M+ + P++ Y ++ + G + E KL
Sbjct: 335 SEFVFSAVITGFCKSGEVDRALMVWETMVAA-RVKPNVVLYSAMIDGFARSGRMTEAEKL 393
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
E M D P++V Y++++ ++++ K G
Sbjct: 394 FEEMV---------------DAKCIPNIVTYSSMVRGYFHIANSSRALSTWEEMIKVGCV 438
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P+A +Y +L+ + G++ +A+ +NM RG Y + L
Sbjct: 439 PTAISY------------SILISGLCDVGRLKDAMMVWKNMIGRGCAPDTIAYTSMMKGL 486
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 465
C +G + + + + +KP I++ L+ + + + + + M D C+P+
Sbjct: 487 CMSGMVDGGLRLFNDMLAKGDAKPDVISYNVLLDALIRTNDLPRAMDLLNQMLDQMCDPD 546
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFE 490
T N L+ + + K +E E
Sbjct: 547 TITCNIFLREFGVLE--GKGREFLE 569
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 159/378 (42%), Gaps = 50/378 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAIL 238
M+Q G+ E L+ G W A +L + G+K S +V++++LA
Sbjct: 185 MSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK-----PSSYVFSRILAGF 239
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
G +A + M + PD Y+ + T G+ L + +RMR++
Sbjct: 240 RDRGEWQKAFAVLREM-HASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEG---- 294
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
+EPD+V +N +++A + +F ++R+S TY
Sbjct: 295 -----------IEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTY------ 337
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
+++ EE + A + M+++G+V Y L +GR+++A+
Sbjct: 338 ------NIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDC 391
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYS 477
+E +K+ KP + L+ + G D +++ + M+ D E + +N+++ +
Sbjct: 392 IEAMKA-DGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFG 450
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+ ++A + + F+ +G L+PD TY+++++A Q+E +Y
Sbjct: 451 EDRRIAEAFSVLQ-----------FMKENG--LRPDVITYTTLMKALIRVEQFEKVPVIY 497
Query: 538 KGMALSGCQLDQTKHAWL 555
+ M SGC D+ A L
Sbjct: 498 EEMITSGCAPDRKARAML 515
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 45/265 (16%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++P YNA+L V K V ++ + G+ P ATY L +++Y R
Sbjct: 155 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRA------- 207
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK-----IKS 424
WE +I ++ ME GV ++ V+ + + G WQ A V+ + ++
Sbjct: 208 GRWESARI-----LLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRP 262
Query: 425 LRHSKPLEITFTGLIISSMDG----GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 479
RH F ++I + GH D F M++ EP++ T N ++ + +
Sbjct: 263 DRH-------FYNVMIDTFGKYNCLGHAMDA---FDRMREEGIEPDVVTWNTLIDAHCKG 312
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
+A ELF+E +N PL TY+ M+ +WE E +
Sbjct: 313 GRHDRAIELFDEMRESN-----------CPLGTT--TYNIMINLLGEEQRWEGVEAMLAE 359
Query: 540 MALSGCQLDQTKHAWLLVEASRAGK 564
M G + + L+ R+G+
Sbjct: 360 MKEQGLVPNIITYTTLVDVYGRSGR 384
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 101/245 (41%), Gaps = 15/245 (6%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L++ + + G + A + M Q GV + Y L GRW+ A ++++++++
Sbjct: 165 LLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEA-D 223
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
KP F+ ++ D G ++ + M P+ N M+ + + + A
Sbjct: 224 GVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHA 283
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+ F+ R G ++PD T++++++A + + ++ M S C
Sbjct: 284 MDAFD---RMREEG----------IEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNC 330
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
L T + ++ + +E + E G +P+ + +T ++ +++AV
Sbjct: 331 PLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVD 390
Query: 606 LINAM 610
I AM
Sbjct: 391 CIEAM 395
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 158/371 (42%), Gaps = 45/371 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y KL++ L GR H+ + +F ++D PD+ +++ V + +VG +++ ++L+E
Sbjct: 219 YAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVE 278
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL-KP 347
RM + PD V +N +++ +++ V ++L++ G+ P
Sbjct: 279 RMNEFGC---------------SPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMP 323
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ T+ ++ + + GK+ +A+A +M G++ Y L
Sbjct: 324 NVVTF------------TSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYG 371
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
G A+ V +++ LR P +TF+ LI G +DD + I+ M H +PN+
Sbjct: 372 KVGDLGSAVEVYQQMTRLR-CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNV 430
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T + ++ + + +A L E L D + P + Y+ +++
Sbjct: 431 YTFSIIIHSLCKQNRSDEAICLLNELN---------LRPD---IAPQAFIYNPVIDVLCK 478
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL- 585
+ + + KGM GC+ D+ + L++ + F ++EAG P +
Sbjct: 479 CGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSIT 538
Query: 586 --FFTEMLIQA 594
F L++A
Sbjct: 539 VNCFISCLLKA 549
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 158/371 (42%), Gaps = 45/371 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y KL++ L GR H+ + +F ++D PD+ +++ V + +VG +++ ++L+E
Sbjct: 47 YAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVE 106
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL-KP 347
RM + PD V +N +++ +++ V ++L++ G+ P
Sbjct: 107 RMNEFGCS---------------PDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMP 151
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ T+ ++ + + GK+ +A+A +M G++ Y L
Sbjct: 152 NVVTF------------TSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYG 199
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
G A+ V +++ LR P +TF+ LI G +DD + I+ M H +PN+
Sbjct: 200 KVGDLGSAVEVYQQMTRLR-CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNV 258
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T + ++ + + +A L E L D + P + Y+ +++
Sbjct: 259 YTFSIIIHSLCKQNRSDEAIGLLNELN---------LRPD---IAPQAFIYNPVIDVLCK 306
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL- 585
+ + + KGM GC+ D+ + L++ + F ++EAG P +
Sbjct: 307 CGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSIT 366
Query: 586 --FFTEMLIQA 594
F L++A
Sbjct: 367 VNCFISCLLKA 377
>gi|428179078|gb|EKX47950.1| hypothetical protein GUITHDRAFT_136922 [Guillardia theta CCMP2712]
Length = 714
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 109/528 (20%), Positives = 210/528 (39%), Gaps = 114/528 (21%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
I+ VD+L E ++ K V S +M+ E + +L+ +G K VL W+
Sbjct: 19 IKSYVDKLLSSEQSSDKVKKVL----SSMMWDEKLVSRLIVEIGRKHKKMMVADVLRWMR 74
Query: 218 GLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
++R +K S + + L + G EA+ I N+M +D + PDI +Y++V L
Sbjct: 75 EESERRKIKLSSLPFNACIRALERMGDWREAVAILNIMEKD-GVEPDIVSYNTVLSALRH 133
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
++ + +++RMR+K S PD+V +N L AC W+ +
Sbjct: 134 SPDIQNVFVMLKRMREKVS----------------PDIVSFNTALAACQRQCDWESGVAI 177
Query: 337 FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
+ + + ++ T+ + RC GK +EA A M+ + V +
Sbjct: 178 LEMMSEDQIERDVFTFSTLISLCDRC------------GKYDEAFALKEEMDAKNV--SP 223
Query: 397 SVY-YELACCLCNN---------------------------------------------- 409
++Y + +C N
Sbjct: 224 NIYTFNALIAVCKNSLATSLMSRKRQNTLTIAQILFAEAKAAGLRPDIVTYNSLLGVYME 283
Query: 410 -GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 467
G+W+++ ++ +I+ +H IT++ LI + I +++ M + PN+
Sbjct: 284 MGKWKESYDILFEIED-QHVITDVITYSTLISTFAKTRKYSLAIEMYEKMMERQVMPNVI 342
Query: 468 TVNAMLKVYSRNDMFSKAKELFEE------------------TTRANSSGYT----FLSG 505
T N+++ R + FS+A F++ + R+ + T FL
Sbjct: 343 TYNSLIFACLRANNFSQAFAFFDDMQAQGISPNVVTYSTMIASCRSKDNWVTAFDLFLEM 402
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
+ PD T+S++L + QWE V + M +G QL+ ++ ++ +AG+
Sbjct: 403 IRKEIPPDPMTFSALLSVCQHSKQWEQAMDVLEWMQDAGIQLNIRMYSAVVHVCGQAGR- 461
Query: 566 HLLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L+ AF L E G P+ + FT ++ V + ++A ++ M
Sbjct: 462 --LDDAFRILDECKRDGIKPNVIMFTALIHACKVARDLDRAFRVLELM 507
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/416 (18%), Positives = 157/416 (37%), Gaps = 69/416 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y LL + + G+ E+ I +ED ++ D+ Y ++ T + +++ E+M
Sbjct: 274 YNSLLGVYMEMGKWKESYDIL-FEIEDQHVITDVITYSTLISTFAKTRKYSLAIEMYEKM 332
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
M R+ + P+++ YN+++ AC+ ++ + F F ++ G+ P+
Sbjct: 333 ----------MERQ-----VMPNVITYNSLIFACLRANNFSQAFAFFDDMQAQGISPNVV 377
Query: 351 TYGLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNM 387
TY + S R L+ + +A+ + M
Sbjct: 378 TYSTMIASCRSKDNWVTAFDLFLEMIRKEIPPDPMTFSALLSVCQHSKQWEQAMDVLEWM 437
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+ G+ +Y + GR DA ++++ K KP I FT LI +
Sbjct: 438 QDAGIQLNIRMYSAVVHVCGQAGRLDDAFRILDECKR-DGIKPNVIMFTALIHACKVARD 496
Query: 448 IDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
+D + + MK DH PN+ T N +L ++ + F+ G+
Sbjct: 497 LDRAFRVLELMKEDHVTPNLVTFNVLLGTC---EVVGNSTCAFQVVGLLQEYGF------ 547
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
+ + T++++++ +H+W+ VY M L + + L + A G
Sbjct: 548 ----RANLQTFNTLIKTCVRSHEWQKAFEVYSQMQLQRIRPSLSTFNALSMAAEEGGD-- 601
Query: 567 LLEHAFDSLLE------------AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
A D +++ AG P + ++ + SNY+KA + M
Sbjct: 602 -WRRAIDVMVDMRIKTEKILIRMAGHTPSVQAYNSLISACVKSSNYQKAFDVYKGM 656
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/159 (19%), Positives = 73/159 (45%), Gaps = 20/159 (12%)
Query: 236 AILGKAGRPHEALRIFNL--MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
++ R HE + F + ++ + P ++ ++++++ + G + + ++ MR K
Sbjct: 556 TLIKTCVRSHEWQKAFEVYSQMQLQRIRPSLSTFNALSMAAEEGGDWRRAIDVMVDMRIK 615
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
K + M P + YN++++ACV S ++ F V+K ++ SG++ + TY
Sbjct: 616 TEKILIRMAGHT------PSVQAYNSLISACVKSSNYQKAFDVYKGMKTSGVRANIVTYN 669
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
L ++ + K++E + + M+Q V
Sbjct: 670 L------------IISILSGQRKLSEVLKVINEMKQEEV 696
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 113/560 (20%), Positives = 215/560 (38%), Gaps = 90/560 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+LK L D G A+++ + + +R Y L+ L K G +AL++F+ ML
Sbjct: 178 ILKALVDSGVILLALALYNRMVAAGCA---PNRATYNVLMDGLCKQGMAGDALKMFDEML 234
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D + P++ Y + +L G + E V+L+ M+ K PD V
Sbjct: 235 -DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCL---------------PDEV 278
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES------------YRRCL 363
YNA L+ + F L+ G Y ++ Y + +
Sbjct: 279 TYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTM 338
Query: 364 LK-----------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
L+ +++R E G+I +A++ + M+++G V Y + LC++G
Sbjct: 339 LERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDL 398
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTVN 470
+ A + ++ L+++ L+ T ++I + G +D+ + IF M +H C+P + T N
Sbjct: 399 ERAHTLRSEM--LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYN 456
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTF---------------------LSGDGAP 509
A++ + R +A+ LF + N+ + G
Sbjct: 457 ALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQV 516
Query: 510 LK--------------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
LK PD TY++++ A + ++K + L G D+ + L
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
+ RA + + F ++L++G P + M+ +A+ L + Y P
Sbjct: 577 IDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL--WLDYLPK 634
Query: 616 HITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 675
+E+ + I L+ + L + I+ + + L LC+ + D
Sbjct: 635 KYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDD 694
Query: 676 LSSSAH----FGSQAIDISP 691
H FG IDI+P
Sbjct: 695 ALRIFHTLQEFG---IDITP 711
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 28/241 (11%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAIL 238
M Q+ L+ ++ GL +G +AM + D + +G + Y L+
Sbjct: 408 MLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCD-----PTVMTYNALIDGF 462
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG--QVGLLKELVKLIERMRQKPSK 296
+ GR EA +F+ M N P + + +TLG QV + L KL+ M Q
Sbjct: 463 YREGRLEEARMLFHKMEMGNN--PSLF----LRLTLGANQVRDSESLRKLVHDMCQSGQV 516
Query: 297 -RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ + R D + PD+V YN ++N + G +FK+L+ G+ P TYG
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYG-- 574
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+ L+RA E N+A+ +N+ Q G + S+Y + LC + A
Sbjct: 575 ------TLIDGLLRAHRE----NDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQA 624
Query: 416 M 416
+
Sbjct: 625 I 625
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 29/222 (13%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P VYN +L A V S ++ ++ +G P+ ATY VL+
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATY------------NVLMDGL 217
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
++G +A+ M RG++ +Y L LCN G+ +A+ ++ +K + P
Sbjct: 218 CKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKD-KGCLPD 276
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
E+T+ + G +++ ++D G LK YS LF+
Sbjct: 277 EVTYNAFLSGLCKVGRVNEAFQRLVMLQD------GGFALGLKGYS-----CLIDGLFQA 325
Query: 492 TTRANSSGY--TFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
GY T L + + PD Y+ M+ A A + E
Sbjct: 326 RRFDEGFGYYKTMLERN---ISPDVVLYTIMIRGCAEAGRIE 364
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 144/370 (38%), Gaps = 49/370 (13%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
R EA+ + + M+E PD + ++ L Q E V L+ERM K
Sbjct: 148 GNRISEAVALVDQMVE-MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC----- 201
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES-- 358
+PDLV Y AV+N + + ++ K ++ Y ++S
Sbjct: 202 ----------QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLC 251
Query: 359 -YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
YR +++A+ M+ +G+ Y L CLCN GRW DA
Sbjct: 252 KYRH---------------VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVY 476
++ + R P +TF LI + G + + +F M + +PNI T N+++ +
Sbjct: 297 LLSDMLE-RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 477 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
+D +A+++F + PD TY++++ A + +
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDC-------------LPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 537 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 596
++ M+ G + + L+ +A C + F ++ G P+ + + +L
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 597 QSNYEKAVAL 606
EKA+ +
Sbjct: 463 NGKLEKAMVV 472
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 139/378 (36%), Gaps = 78/378 (20%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
+R L+ + +K F Y+ L++ L GR +A R+ + MLE + P++
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER-KINPNVV 311
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
++S+ + G L E KL + M Q+ ++P++V YN+++N
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRS---------------IDPNIVTYNSLINGFC 356
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
+ +F + P TY L+ F + K+ + + R
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTY------------NTLINGFCKAKKVVDGMELFR 404
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
+M +RG+VG +T+T LI
Sbjct: 405 DMSRRGLVGNT------------------------------------VTYTTLIHGFFQA 428
Query: 446 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
D+ +F+ M D PNI T N +L +N KA +FE ++
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK-------- 480
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
++PD YTY+ M E A + E ++ ++L G + D + ++ + G
Sbjct: 481 -----MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGL 535
Query: 565 CHLLEHAFDSLLEAGEIP 582
F + E G +P
Sbjct: 536 KEEAYTLFIKMKEDGPLP 553
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 94/230 (40%), Gaps = 40/230 (17%)
Query: 216 VYGLKDKRDLKSR------FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS 269
V G++ RD+ R YT L+ +A A +F M+ D ++P+I Y++
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD-GVHPNIMTYNT 455
Query: 270 VAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKN----------WDPV------- 309
+ L + G L++ + + E +++ +P N+ + WD
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++PD++ YN +++ + + +F ++++ G P + TY L+R
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY------------NTLIR 563
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
A +G + ++ M G AS Y L + ++GR L V
Sbjct: 564 AHLRDGDKAASAELIKEMRSCRFAGDAST-YGLVTDMLHDGRLDKGFLEV 612
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 128/300 (42%), Gaps = 29/300 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+P +V ++LN ++++ + + + GL+P+ Y ++
Sbjct: 681 FQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIY------------NTVIN 728
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHS 428
+ +N A+ ME++G+V A Y L LCN+GRW DA L+ + +K R
Sbjct: 729 GLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVK--RKI 786
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
P I FT LI + + G++ + ++++ M + PNI T N+++ + AK
Sbjct: 787 DPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKH 846
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
+F+ PD TY++++ + + E ++ M G
Sbjct: 847 MFDLMVSKGCF-------------PDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVG 893
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 607
D + L+ +AGK ++ + F+ +++ G P + + +L EKA+ ++
Sbjct: 894 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMV 953
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 35/249 (14%)
Query: 196 LLKGLGDKGSWRQAMSVL-DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
L+ GL + G W A +L D V K K D F +T L+ K G EA ++ M
Sbjct: 761 LISGLCNSGRWTDAARLLRDMV---KRKIDPNVIF-FTALIDTFVKEGNLLEAKNLYKEM 816
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ +++P+I Y+S+ G L + + + M K PD+
Sbjct: 817 IRR-SVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGC---------------FPDV 860
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V YN ++ S + + +F ++ GL A TY L+ + +
Sbjct: 861 VTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTY------------NTLIHGYCQA 908
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
GK+N A M GV Y L CLCNNG+ + A+++VE ++ ++ ++I
Sbjct: 909 GKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQ--KNQMDVDII 966
Query: 435 FTGLIISSM 443
+II M
Sbjct: 967 TYNIIIQGM 975
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 121/338 (35%), Gaps = 45/338 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ +T L+ + R AL + M++ P I S+ Q +E V L++
Sbjct: 651 YSFTILIHCFCRCSRFSLALALLGKMMK-LGFQPSIVTLGSLLNGFCQGNRFQEAVSLVD 709
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M + LEP++V+YN V+N + +F + K G+
Sbjct: 710 SMAELG---------------LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVAD 754
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
A TY L+ G+ +A +R+M +R + + L
Sbjct: 755 AVTY------------NTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 802
Query: 409 NGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
G +A L E I+ R P +T+ LI G + D +F M C P++
Sbjct: 803 EGNLLEAKNLYKEMIR--RSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDV 860
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T N ++ + ++ +LF E T G D +TY++++
Sbjct: 861 VTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVG-------------DAFTYNTLIHGYCQ 907
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
A + + V+ M G D + LL GK
Sbjct: 908 AGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGK 945
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/283 (18%), Positives = 102/283 (36%), Gaps = 63/283 (22%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+P +V + ++L+ ++ F + + KSG +P+ Y L+
Sbjct: 132 DPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVY------------NTLIDC 179
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYE-LACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+ G +N A+ + ME++G + V Y L LC +G W+ A ++ + R
Sbjct: 180 LCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTK-RRIN 238
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM------------------------------- 458
P TFT LI + + G++D+ +++ M
Sbjct: 239 PDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKT 298
Query: 459 -----KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 513
C PN+ T N ++ + ++ +LF+ R G D
Sbjct: 299 FDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVG-------------D 345
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+TY++++ + + ++ M G D H LL
Sbjct: 346 TFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILL 388
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 127/328 (38%), Gaps = 57/328 (17%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
R H+A + M++ P++ Y+++ L + G + ++L+ M +K
Sbjct: 150 RIHDAFSLVASMVKS-GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGR------- 201
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
L DLV YN +L S +W+ + + + K + P T+
Sbjct: 202 -------LAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTF---------- 244
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
L+ AF ++G ++EA + M Q + Y L LC +GR A + +
Sbjct: 245 --TALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLM 302
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 481
S + P +T+ LI ++D + +FQ M ++ + T N ++ Y +
Sbjct: 303 AS-KGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGK 361
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY--------------SSMLEASATA 527
AK++F S G T PD T+ S+M++ +
Sbjct: 362 LRVAKDIFSWMV---SCGVT----------PDIITHCILLHGLCVNGEIGSAMVKFNDMR 408
Query: 528 HQWEYFEYVYKGMALSG-CQLDQTKHAW 554
+Y V + + G C+ D+ + AW
Sbjct: 409 SGEKYLGIVAYNIMIHGLCKADKVEEAW 436
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 89/235 (37%), Gaps = 43/235 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR------FVYTKLLAILGKAGRPHEALR 249
LL GL G WRQA +L RD+ R F +T L+ K G EA
Sbjct: 212 LLTGLCYSGEWRQAARIL---------RDMTKRRINPDVFTFTALIDAFVKQGNLDEAQE 262
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
++ ML+ ++ P+ Y+S+ L G L K + M K
Sbjct: 263 LYKQMLQS-SIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGC-------------- 307
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
P++V YN ++N S + + +F+++ + GL TY L+
Sbjct: 308 -FPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTY------------NTLIH 354
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
+ + GK+ A M GV + L LC NG AM+ ++S
Sbjct: 355 GYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRS 409
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 95/235 (40%), Gaps = 28/235 (11%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
DL + +++ + + ++ K G PS T+G L+ F
Sbjct: 99 DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFG------------SLLHGFC 146
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPL 431
+I++A + V +M + G VY L CLC NG A+ L+ E K R + L
Sbjct: 147 LRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADL 206
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+T+ L+ G I + M K P++ T A++ + + +A+EL++
Sbjct: 207 -VTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYK 265
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+ +++ + P+ TY+S++ + + + + MA GC
Sbjct: 266 QMLQSS-------------IGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGC 307
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 133/355 (37%), Gaps = 45/355 (12%)
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
+ ME G+ + L C C R A+ ++ K+ L + P +TF L+
Sbjct: 89 QQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYD-PSIVTFGSLLHGFCL 147
Query: 445 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR-----ANSS 498
I D S+ M K EPN+ N ++ +N + A EL E + A+
Sbjct: 148 RNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLV 207
Query: 499 GY-TFLSG-----------------DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
Y T L+G + PD +T++++++A + + +YK M
Sbjct: 208 TYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQM 267
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 600
S + + L+ G+ + + FD + G P+ + + ++
Sbjct: 268 LQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRV 327
Query: 601 EKAVALINAMAYAPFHITERQWTELF----ESNEDRISRDKLEKLLNALCNCNAASSEIT 656
E + L M + L + + R+++D + + + +C IT
Sbjct: 328 EDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKD----IFSWMVSCGVTPDIIT 383
Query: 657 VSNLSRALHALCRSE-------KERDL-SSSAHFGSQAIDISPLHGIHEAFDVKE 703
L LH LC + K D+ S + G A +I +HG+ +A V+E
Sbjct: 384 HCIL---LHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIM-IHGLCKADKVEE 434
>gi|168052517|ref|XP_001778696.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669911|gb|EDQ56489.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 179/431 (41%), Gaps = 85/431 (19%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHE 246
F L+ + G+ ++ V +W +K+++ ++R +Y ++ + + R +
Sbjct: 49 FNRKNFPALISEITRTGALEHSLRVFNW---MKNQKCYRARTDIYNCMIWLHARHQRADQ 105
Query: 247 ALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
A +F M + C PD+ Y+++ G+ G + +++ + M Q P
Sbjct: 106 ARGLFYEMKVWRCK--PDVETYNALMNVHGRAGQWRWALQIFDDMLQAPKP--------- 154
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
+ P YN ++NAC S QW + K++ +G+ P TY
Sbjct: 155 ----IAPSRSSYNNLINACGSSGQWFKALEICKRMTDNGVGPDLMTY------------N 198
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+++ AF G+ AVA YY+ L+ +K+
Sbjct: 199 IILSAFKSGGQPRHAVA----------------YYD--------------HLISKKV--- 225
Query: 426 RHSKPLEITFTGLIISSMDG-GHIDDCISIFQHMK--DHCEPNIGTVNAMLKVYSRNDMF 482
PL+ +I++ + G +D I++F+ M+ + CEP++ T NA+L VY+
Sbjct: 226 ----PLDRYSHNIILNCLTKLGRFEDAINLFKEMRKMNGCEPDVVTFNALLHVYALCGQI 281
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
+KA+E F+ + G+G + P T++++L A A+ + V +
Sbjct: 282 TKAQETFD-----------MMIGEG--MAPTIVTFNTLLGAYASQGMYTEALQVVGLLVK 328
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
+ + D ++ LL +AG + FD + + P+ + F ++ YE+
Sbjct: 329 AKFEPDVVSYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYER 388
Query: 603 AVALINAMAYA 613
A L++ MA A
Sbjct: 389 ARELLHDMAEA 399
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 162/409 (39%), Gaps = 55/409 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL +G + +A+ V+ + K + D+ S Y+ LL GKAG P +A +F+LM
Sbjct: 306 LLGAYASQGMYTEALQVVGLLVKAKFEPDVVS---YSSLLNAFGKAGYPEKAQEVFDLMK 362
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P++ ++ + G + +L+ M + +EP++V
Sbjct: 363 QRSR-KPNLVTFNGLMDAYASAGKYERARELLHDMAEAR---------------IEPNVV 406
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
++ AC + + V VF + + + + + A + A+ E G
Sbjct: 407 TICSLFAACARARCPEKVRDVFHEAKVRQIALNVPAFNAA------------ITAYIEAG 454
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-T 434
+ +EA A + ME++ + + L + G +++A + +K+ L PL +
Sbjct: 455 QFDEAKALLEVMEEQNLRPNGVTFLLLINAAGSLGDYREARTLYDKMVDL--GIPLTVEP 512
Query: 435 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE------ 487
+ LI + G ++ +IF M K C+ N+ T +++ Y D A E
Sbjct: 513 CSALINAFAKHGMYNEARTIFDDMRKAGCKANVVTYTSLMIAYRMYDDAQLACEEMVAAG 572
Query: 488 ----------LFEETTRANSSGYTFL---SGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
LF +AN S S + D+ Y+ L A + WE
Sbjct: 573 ITPDSIAFGTLFVALNKANRSEKVLQIEKSSRARGILFDDVAYTETLLACSRLKDWETAL 632
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL-LEAGEIP 582
++Y+GM +L T LL R+GK L F L + G +P
Sbjct: 633 FLYEGMKKRRLRLTNTMVINLLSAVGRSGKLDRLHKVFLELQQQIGFVP 681
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 76/420 (18%), Positives = 159/420 (37%), Gaps = 54/420 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G W +A+ + + DL + Y +L+ G+P A+ ++ ++
Sbjct: 165 LINACGSSGQWFKALEICKRMTDNGVGPDLMT---YNIILSAFKSGGQPRHAVAYYDHLI 221
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ D +++ + L ++G ++ + L + MR+ EPD+V
Sbjct: 222 SK-KVPLDRYSHNIILNCLTKLGRFEDAINLFKEMRKMNG--------------CEPDVV 266
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+NA+L+ Q F + G+ P+ T+ L+ A+ +G
Sbjct: 267 TFNALLHVYALCGQITKAQETFDMMIGEGMAPTIVTF------------NTLLGAYASQG 314
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
EA+ V + + Y L G + A V + +K R KP +TF
Sbjct: 315 MYTEALQVVGLLVKAKFEPDVVSYSSLLNAFGKAGYPEKAQEVFDLMKQ-RSRKPNLVTF 373
Query: 436 TGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE--- 491
GL+ + G + + M + EPN+ T+ ++ +R K +++F E
Sbjct: 374 NGLMDAYASAGKYERARELLHDMAEARIEPNVVTICSLFAACARARCPEKVRDVFHEAKV 433
Query: 492 ------TTRANSSGYTFLSG-------------DGAPLKPDEYTYSSMLEASATAHQWEY 532
N++ ++ + L+P+ T+ ++ A+ + +
Sbjct: 434 RQIALNVPAFNAAITAYIEAGQFDEAKALLEVMEEQNLRPNGVTFLLLINAAGSLGDYRE 493
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 592
+Y M G L + L+ ++ G + FD + +AG + + +T ++I
Sbjct: 494 ARTLYDKMVDLGIPLTVEPCSALINAFAKHGMYNEARTIFDDMRKAGCKANVVTYTSLMI 553
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 111/272 (40%), Gaps = 20/272 (7%)
Query: 410 GRWQDAMLVVEKIKSLRHSKPL---EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 465
G+W+ A+ + + + L+ KP+ ++ LI + G + I + M D+ P+
Sbjct: 136 GQWRWALQIFDDM--LQAPKPIAPSRSSYNNLINACGSSGQWFKALEICKRMTDNGVGPD 193
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T N +L + R + Y L PL D Y+++ +L
Sbjct: 194 LMTYNIILSAFKSGG-----------QPRHAVAYYDHLISKKVPL--DRYSHNIILNCLT 240
Query: 526 TAHQWEYFEYVYKGM-ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
++E ++K M ++GC+ D LL + G+ + FD ++ G P
Sbjct: 241 KLGRFEDAINLFKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFDMMIGEGMAPTI 300
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNA 644
+ F +L Q Y +A+ ++ + A F ++ L + +K +++ +
Sbjct: 301 VTFNTLLGAYASQGMYTEALQVVGLLVKAKFEPDVVSYSSLLNAFGKAGYPEKAQEVFDL 360
Query: 645 LCNCNAASSEITVSNLSRALHALCRSEKERDL 676
+ + + +T + L A + + E+ R+L
Sbjct: 361 MKQRSRKPNLVTFNGLMDAYASAGKYERAREL 392
>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
Length = 287
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 127/283 (44%), Gaps = 27/283 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++ ++ Y+A++N C+ +++ V+KQ+ + G P+ TY + ++ ++ R
Sbjct: 31 IDCNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILID------VEASKR 84
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
E ++ AVA VR+ G+ Y + +G+ + A+ V EK+ + K
Sbjct: 85 KTTERRRL--AVALVRS----GIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAA-GVK 137
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+T LI + G ++ + IF+ M + CE N+ T ++++ + + A EL
Sbjct: 138 PSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSSLISACEKAGRWEMALEL 197
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F + + N KP+ TY+S++ A + WE +++ M GC+ D
Sbjct: 198 FSKMHKENC-------------KPNVVTYNSLIAACSHGGHWEKASELFEQMQTQGCKPD 244
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ R G+ AF+ + G P F ++
Sbjct: 245 SITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNSLM 287
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G KG +A+ + + +R++ Y+ L++ KAGR AL +F+ M
Sbjct: 146 LISAYGKKGQVEKALDIFRDMIRRGCERNV---ITYSSLISACEKAGRWEMALELFSKMH 202
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ N P++ Y+S+ G ++ +L E+M+ + K PD +
Sbjct: 203 KE-NCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQGCK---------------PDSI 246
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
Y ++ A QW+ F+Q++ G P AA + M
Sbjct: 247 TYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNSLM 287
>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
Length = 671
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/391 (20%), Positives = 159/391 (40%), Gaps = 52/391 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+Y+ L+ + GR EAL++ N ML P+ Y++ L G +E+ +LI
Sbjct: 287 IIYSTLVNGFSEHGRVDEALKLLNTML----CRPNTVCYNAALKGLCIAGRWEEVGELIA 342
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +K P+ ++ ++N+ + + V +Q++K G P
Sbjct: 343 EMVRKDCP---------------PNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPD 387
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
+Y ++ F ++ + ++A+ +++M + T S L C LC
Sbjct: 388 VVSY------------NTIISCFSDQARADDALKLLKSMLCKP--DTISFNAVLKC-LCK 432
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
RW DA+ +V K+ + + E+TF LI S G + D I +F+ M K C P+I
Sbjct: 433 AKRWYDAVELVAKMLK-KDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIV 491
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T ++++ +S + A +LF P + D ++Y++ L+ A
Sbjct: 492 TYSSLINGFSEQGLDEMAFDLFRSM----------------PCRADIFSYNATLKGLCMA 535
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
+W+ + M C ++ L+ + G + ++ + + G P +
Sbjct: 536 ARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTY 595
Query: 588 TEMLIQAIVQSNYEKAVALINAMAYAPFHIT 618
++ Q + A+ ++ M P I+
Sbjct: 596 NALINGYSEQGRLDDALKFLSTMPCEPDTIS 626
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 129/325 (39%), Gaps = 52/325 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y +++ R +AL++ ML PD ++++V L + + V+L+ +M
Sbjct: 391 YNTIISCFSDQARADDALKLLKSML----CKPDTISFNAVLKCLCKAKRWYDAVELVAKM 446
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+K RI M +N ++++ + Q K VF+ + K P
Sbjct: 447 LKKDC-RINEM--------------TFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIV 491
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY L+ F E+G A R+M R + + + + LC
Sbjct: 492 TY------------SSLINGFSEQGLDEMAFDLFRSMPCRADIFSYNATLKG---LCMAA 536
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
RW DA ++ + + P E+TF LI S G ++ I +++ M + P+I T
Sbjct: 537 RWDDAGELIADMVT-EDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTY 595
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
NA++ YS A + FLS P +PD +Y+S+L+ A +
Sbjct: 596 NALINGYSEQGRLDDALK--------------FLST--MPCEPDTISYNSILKGLCRAER 639
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAW 554
W+ E + M C ++ +
Sbjct: 640 WKDAEKLVTEMLRKNCTPNEVTFKY 664
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 102/261 (39%), Gaps = 42/261 (16%)
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPN 465
LC R DA V+E +K+ + ++ L+ G + D + + + N
Sbjct: 126 LCARRRLADAERVLEALKASGAAD--AVSHNTLVAGYCRDGSLGDAERVVEAARASGTAN 183
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T A++ Y R+ + A L P+ PD YTY+++L+
Sbjct: 184 VVTYTALIDGYCRSGRLADALRLIASM----------------PVAPDTYTYNTVLKGLC 227
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA----GEI 581
A QWE E + + M + C ++ A + + G LL+ A + LLE G
Sbjct: 228 CAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNG---LLDRAVE-LLEQMPKYGCT 283
Query: 582 PHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER----------QWTELFESNED 631
P + ++ ++ ++A+ L+N M P + +W E+ E +
Sbjct: 284 PDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEVGELIAE 343
Query: 632 RISRD------KLEKLLNALC 646
+ +D L+N+LC
Sbjct: 344 MVRKDCPPNDATFSTLINSLC 364
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/329 (18%), Positives = 130/329 (39%), Gaps = 66/329 (20%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-------- 361
+ PD YN VL + QW+ + +++ ++ P+ T+ + ++ +
Sbjct: 212 VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 271
Query: 362 ----------C-----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-C 405
C + LV F E G+++EA+ + M R +V Y A
Sbjct: 272 ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR----PNTVCYNAALKG 327
Query: 406 LCNNGRWQD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-E 463
LC GRW++ L+ E ++ + P + TF+ LI S ++ + + + M+ +
Sbjct: 328 LCIAGRWEEVGELIAEMVR--KDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYM 385
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
P++ + N ++ +S A +L + KPD +++++L+
Sbjct: 386 PDVVSYNTIISCFSDQARADDALKLLKSML----------------CKPDTISFNAVLKC 429
Query: 524 SATAHQW-EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
A +W + E V K M C++++ L+ DSL + G++
Sbjct: 430 LCKAKRWYDAVELVAK-MLKKDCRINEMTFNILI----------------DSLCQNGQVK 472
Query: 583 HPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ E++ + + +LIN +
Sbjct: 473 DAIEVFELMPKYRCMPDIVTYSSLINGFS 501
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 99/471 (21%), Positives = 187/471 (39%), Gaps = 76/471 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L++ L D+G A+S+LD + +R + V YT LL + + +A+ + + M
Sbjct: 149 LIRVLCDRGRVADALSLLDDML----RRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEM 204
Query: 255 -LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
+ C P+I Y+ + + + G + + +L+ R+ PS +PD
Sbjct: 205 RAKGCT--PNIVTYNVIINGMCREGRVDDARELLNRL---PSYG------------FQPD 247
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR------------ 361
V Y +L S +W V +F ++ + P+ T+ + + + R
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLE 307
Query: 362 ------C-----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
C L +++ + ++G++++A + +M G Y + LC
Sbjct: 308 QMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAE 367
Query: 411 RWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 468
RW DA L+ E +++ + P E+TF I G I+ I + + M +H C + T
Sbjct: 368 RWDDAKELLNEMVRN--NCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVT 425
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
NA++ + A ELF P KP+ TY+++L A
Sbjct: 426 YNALVNGFCVQGHIDSALELFRSM----------------PCKPNTITYTTLLTGLCNAE 469
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPL 585
+ + + M C + L+ + G LE A + ++E G P+ +
Sbjct: 470 RLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKG---FLEEAIELVEQMMEHGCTPNLI 526
Query: 586 FFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRI 633
+ +L + E A+ L++ + +P IT + S EDRI
Sbjct: 527 TYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGIL-SKEDRI 576
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/460 (19%), Positives = 176/460 (38%), Gaps = 68/460 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
++ TKL+ L + GR +A R+ E D+ AY+++ + G L +LI
Sbjct: 77 YLCTKLIRNLCRRGRTSDAARVLRAA-EGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIG 135
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M PV PD Y ++ + + + + G +P+
Sbjct: 136 SM-----------------PV-APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPN 177
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY VL+ A +A+A + M +G Y + +C
Sbjct: 178 VVTY------------TVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCR 225
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIG 467
GR DA ++ ++ S +P +++T L+ DD +F + M+ +C PN
Sbjct: 226 EGRVDDARELLNRLPSYGF-QPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEV 284
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG-------------DGAPL---- 510
T + +++ + R M +A ++ E+ T + T L D L
Sbjct: 285 TFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDM 344
Query: 511 -----KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
PD +Y+++L+ A +W+ + + M + C ++ + + G
Sbjct: 345 GSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKG-- 402
Query: 566 HLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQW 622
L+E A + + E G + + ++ VQ + + A+ L +M P IT +
Sbjct: 403 -LIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTIT---Y 458
Query: 623 TELFE--SNEDRI--SRDKLEKLLNALCNCNAASSEITVS 658
T L N +R+ + + + ++L C N + + VS
Sbjct: 459 TTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVS 498
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 137/352 (38%), Gaps = 61/352 (17%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT +L L +A R +A + N M+ + N P+ +++ L Q GL+++ + LIE+M
Sbjct: 356 YTTVLKGLCRAERWDDAKELLNEMVRN-NCPPNEVTFNTFICILCQKGLIEQAIMLIEQM 414
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ +V YNA++N CV H + + R KP+
Sbjct: 415 SEHGCTV---------------GVVTYNALVNGFCVQGH----IDSALELFRSMPCKPNT 455
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L+ +++ A V M + + L C
Sbjct: 456 ITY------------TTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQK 503
Query: 410 GRWQDAMLVVEKIKSLRH-SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
G ++A+ +VE++ + H P IT+ L+ +D + + + P++
Sbjct: 504 GFLEEAIELVEQM--MEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVI 561
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML----EA 523
T ++++ + S+ D +A +LF ++P Y+ +L +
Sbjct: 562 TFSSIIGILSKEDRIEEAVQLFHVVQDIG-------------MRPKAVVYNKILLGLCKR 608
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
+ ++F Y M +GC +++ + L+ + G LL+ A D L
Sbjct: 609 CEIDNAIDFFAY----MVSNGCMPNESTYIILIEGLAHEG---LLKEAQDLL 653
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 158/371 (42%), Gaps = 45/371 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y KL++ L GR H+ + +F ++D PD+ +++ V + +VG +++ ++L+E
Sbjct: 216 YAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVE 275
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL-KP 347
RM + PD V +N +++ +++ V ++L++ G+ P
Sbjct: 276 RMNEFGC---------------SPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMP 320
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ T+ ++ + + GK+ +A+A +M G++ Y L
Sbjct: 321 NVVTF------------TSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYG 368
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
G A+ V +++ LR P +TF+ LI G +DD + I+ M H +PN+
Sbjct: 369 KVGDLGSAVEVYQQMTRLR-CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNV 427
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T + ++ + + +A L E L D + P + Y+ +++
Sbjct: 428 YTFSIIIHSLCKQNRSDEAIGLLNELN---------LRPD---IAPQAFIYNPVIDVLCK 475
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL- 585
+ + + KGM GC+ D+ + L++ + F ++EAG P +
Sbjct: 476 CGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSIT 535
Query: 586 --FFTEMLIQA 594
F L++A
Sbjct: 536 VNCFISCLLKA 546
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 161/378 (42%), Gaps = 49/378 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK---ELVKL 286
YT ++ + K + E+ RI N M+E L P + Y+++ + G ++ E++ L
Sbjct: 356 TYTVMVDAMCKERKLDESRRILNEMMEK-GLVPSVVTYNALIRGYCEEGRIEAALEILGL 414
Query: 287 IERMRQKPSKRI-----------KNMHR------KNWDPVLEPDLVVYNAVLNACVPSHQ 329
+E +P++R K++H+ K + L P LV YN++++ +
Sbjct: 415 MESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGH 474
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+ + + L+++GL P TY V + + ++ EA ++++
Sbjct: 475 FDSAYKLLDLLKENGLVPDQWTYS------------VFIDTLCKSKRMEEACDLFNSLKE 522
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
+G+ +Y L C G+ +A+ ++E++ S P T+ LI G +
Sbjct: 523 KGIKANEVMYTALIDGHCKAGKIDEAISLLERMHS-EDCLPNSSTYNSLIYGVCKEGKVQ 581
Query: 450 DCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
+ +S+ ++M K +P + T +++ R F A +F + S G+
Sbjct: 582 EGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMV---SFGH-------- 630
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
KPD YTY++ + T+ + E + M +G D + L+ R G +
Sbjct: 631 --KPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDA 688
Query: 569 EHAFDSLLEAGEIP-HPL 585
+ +L+AG P HP+
Sbjct: 689 FNVLKRMLDAGCDPSHPI 706
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 171/427 (40%), Gaps = 55/427 (12%)
Query: 134 LGSDYFAKNVEWHPEKRWRS---EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTE 190
G+D + ++ E R RS V+VD + + ++ + + M + GL+ +
Sbjct: 330 FGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSV 389
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALR 249
L++G ++G A+ +L GL + + + + Y +L+ K H+A+
Sbjct: 390 VTYNALIRGYCEEGRIEAALEIL----GLMESNNCRPNERTYNELICGFSKRKHVHKAMT 445
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
+ + MLE L P + Y+S+ + G KL++ +++
Sbjct: 446 LLSKMLES-KLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENG--------------- 489
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L PD Y+ ++ S + + +F L++ G+K + Y L+
Sbjct: 490 LVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMY------------TALID 537
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+ GKI+EA++ + M + +S Y L +C G+ Q+ + +VE + + K
Sbjct: 538 GHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMG-VK 596
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+T LI + G D +F M +P++ T A + Y + +A+ +
Sbjct: 597 PTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGM 656
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA-SATAHQWEYFEYVYKGMALSGCQL 547
A + PD TY+ ++ A ++ F V K M +GC
Sbjct: 657 MARMIEAG-------------VMPDSLTYTLLISAYERLGLAYDAFN-VLKRMLDAGC-- 700
Query: 548 DQTKHAW 554
D + W
Sbjct: 701 DPSHPIW 707
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 100/499 (20%), Positives = 187/499 (37%), Gaps = 61/499 (12%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
+V + Q+GL L+ G A V + + +K ++ YT ++
Sbjct: 236 YVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNM---MPNKGCRRNEVSYTTIIH 292
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
L +AGR E + +F M ED + YP + Y + L E + L MR++
Sbjct: 293 GLCEAGRIDEGISLFKKMRED-DCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSC- 350
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
EP++ Y +++A + + ++ + GL PS TY
Sbjct: 351 --------------EPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYN--- 393
Query: 357 ESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
L+R + EEG+I A+ + ME Y EL C AM
Sbjct: 394 ---------ALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAM 444
Query: 417 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 475
++ K+ + + P +T+ LI GH D + +K++ P+ T + +
Sbjct: 445 TLLSKMLESKLT-PSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDT 503
Query: 476 YSRNDMFSKAKELF----EETTRANSSGYT-FLSGDGAPLK-----------------PD 513
++ +A +LF E+ +AN YT + G K P+
Sbjct: 504 LCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPN 563
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
TY+S++ + + + + M+ G + + L+ E R G F+
Sbjct: 564 SSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFN 623
Query: 574 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRI 633
++ G P +T + N ++A ++ M A +T L + E R+
Sbjct: 624 QMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYE-RL 682
Query: 634 -----SRDKLEKLLNALCN 647
+ + L+++L+A C+
Sbjct: 683 GLAYDAFNVLKRMLDAGCD 701
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 117/308 (37%), Gaps = 53/308 (17%)
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
L +V A+ + G I EA V + Q G+ + Y L C N A V +
Sbjct: 217 LNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMP 276
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMF 482
+ + + E+++T +I + G ID+ IS+F+ M+ D C P + T ++ ND
Sbjct: 277 N-KGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRN 335
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
+ +LF E + +P+ +TY+ M++A
Sbjct: 336 LEGMDLFNEMRERSC-------------EPNVHTYTVMVDAMCKER-------------- 368
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
+LD+++ + ++E G +P + + ++ + E
Sbjct: 369 ---KLDESR------------------RILNEMMEKGLVPSVVTYNALIRGYCEEGRIEA 407
Query: 603 AVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSR 662
A+ ++ M ER + EL R K LL+ + S +T ++L
Sbjct: 408 ALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSL-- 465
Query: 663 ALHALCRS 670
+H C++
Sbjct: 466 -IHVQCKA 472
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 157/420 (37%), Gaps = 88/420 (20%)
Query: 190 EGQMLK-LLKGLGDKGSWRQAMSVLDWVYG--LKDKRDLKSRFVYTKLLAILGKAGRPHE 246
+GQ+L ++ G G +AMS L V G L K ++ LG AGR E
Sbjct: 326 DGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTA-----TLVAVITALGNAGRTEE 380
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
A IF L++ L P AY+++ + G LK+ ++ M +
Sbjct: 381 AEAIFE-ELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSG------------ 427
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
PD Y+ +++A + +W+ V K++ SG++P++ + + SYR
Sbjct: 428 ---FSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYR------ 478
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
+ GK ++ +R M GV Y + A+ ++++ +
Sbjct: 479 ------DRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMR-ME 531
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 485
+P +T+ LI GH + +F+ M++ C P T N M+ + + +
Sbjct: 532 GVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDV 591
Query: 486 KELF----EETTRANSSGYTFLS-------------GDGAP------------------- 509
K L + AN YT L DG
Sbjct: 592 KTLLGKMQSQGLLANVVTYTTLGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRD 651
Query: 510 --------------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
LKPD TY+++++A +++ VY+ M LSGC D+ A L
Sbjct: 652 AEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKARAML 711
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 133/346 (38%), Gaps = 27/346 (7%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+ YNA++ AC + + + ++R+ G Y ++S L R +
Sbjct: 256 LTYNALIGACARNDDLEKALNLMSRMRRDGYPSDFVNYSFIIQS--------LTRTNKSD 307
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
+ + + A +E + + ++ +G AM + ++ S P T
Sbjct: 308 SSMLQKIYA--EIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLS-PKTAT 364
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+I + + G ++ +IF+ +K+ P NA+LK Y + A+ + E
Sbjct: 365 LVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEME 424
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
R SG++ PDE+TYS +++A A A +WE V K M SG + + +
Sbjct: 425 R---SGFS----------PDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFS 471
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 613
+L GK + +G P F+ M+ + + A+A + M
Sbjct: 472 RILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRME 531
Query: 614 PFHITERQWTELFESNEDRISRDKLEKLLNAL--CNCNAASSEITV 657
W L + + +K E+L A+ C+ ++ +
Sbjct: 532 GVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNI 577
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/329 (18%), Positives = 122/329 (37%), Gaps = 83/329 (25%)
Query: 172 AKNWKFVRI----MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
A W+ RI M SG+ ++L D+G W+++ VL R+++
Sbjct: 445 AGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVL---------REMR- 494
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+ + PD Y+ + T G+ L +
Sbjct: 495 -----------------------------NSGVSPDRHFYNVMIDTFGKCNCLDHALATF 525
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+RMR + ++PD V +N +++ S +F+ +++SG P
Sbjct: 526 DRMRMEG---------------VQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSP 570
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
TY +++ +F E+ + + + M+ +G++ Y L
Sbjct: 571 CTTTY------------NIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTL----- 613
Query: 408 NNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 464
G + A + + +R KP + LI + + + S+ Q+MK++ +P
Sbjct: 614 --GLSEQA---INAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKP 668
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETT 493
++ T ++K R + F K ++EE T
Sbjct: 669 DVVTYTTLMKALIRVEKFDKVPAVYEEMT 697
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 148/355 (41%), Gaps = 50/355 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+Y ++ L G +EA + + + L C+ D+ ++ + L +G L+E +L++
Sbjct: 209 LYQTVIHALCAQGGVNEAATLLDEMFLMGCS--ADVNTFNDIVHGLCTLGRLREAARLVD 266
Query: 289 RMRQK---PSK-----RIKNM--------HRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
RM + P+ +K + R V E ++V++N V+ C+ + K
Sbjct: 267 RMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKE 326
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+++ + G P A TY +L+ + G++ A+ +R ME +G
Sbjct: 327 AAELYETMGSKGCPPDAHTY------------SILIHGLCKLGRLGSAMKLLREMEDKGF 374
Query: 393 VGTASVYYELACCLCNNGRWQD--AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
+ Y L C NG W + AML V K L S LE + G+I + +DD
Sbjct: 375 APSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGL--SMNLE-GYNGMICAVCKDRRMDD 431
Query: 451 CISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
+ Q MK +P+I T N ++ N+ +A+ LFE L +G
Sbjct: 432 AMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFEN-----------LLHEG-- 478
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+ + TY++++ A W+ + M L GC LD + L+ R G
Sbjct: 479 VVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGN 533
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 51/290 (17%), Positives = 108/290 (37%), Gaps = 43/290 (14%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LL L ++ P AL + + + + P +Y++V + +++ L RM
Sbjct: 106 LLIPLFRSLAPGRALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRM--- 162
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+HR + P ++ A + + + + + G P Y
Sbjct: 163 -------VHRDR----VPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLY- 210
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
+ ++ A +G +NEA + M G + + ++ LC GR +
Sbjct: 211 -----------QTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLR 259
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAML 473
+A +V+++ +R P IT+ L+ +++ ++ + E N+ N ++
Sbjct: 260 EAARLVDRMM-IRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVP---ELNVVLFNTVI 315
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+ +A EL+E + G P PD +TYS ++
Sbjct: 316 GRCLLDGKLKEAAELYET-----------MGSKGCP--PDAHTYSILIHG 352
>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 675
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 137/327 (41%), Gaps = 41/327 (12%)
Query: 172 AKNWKFVRI----MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
A W+ RI M G+ + ++L G D+G W++A +VL ++ + D
Sbjct: 354 AGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPD--- 410
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y ++ GK A+ FN M E+ + PD+ ++++ + G ++L
Sbjct: 411 RHFYNVMIDTFGKYNCLGHAMDAFNRMREE-GIEPDVVTWNTLIDAHRKGGRHDRAMELF 469
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E MR+ P YN ++N +W GV + ++++ GL P
Sbjct: 470 EEMRESNCP---------------PGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVP 514
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ TY LV + G+ EA+ + M+ G+ + ++Y+ L
Sbjct: 515 NIITY------------TTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYA 562
Query: 408 NNGRWQDAMLVVEKIKS--LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 464
G A+ VV+ +++ L S + L+ + + + + S+ Q MK++ P
Sbjct: 563 QRGLADHALNVVKAMRADGLEAST---VVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRP 619
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEE 491
++ T ++K R + F K ++EE
Sbjct: 620 DVITYTTLMKALIRIEQFDKVPVIYEE 646
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 120/312 (38%), Gaps = 47/312 (15%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++P YNA+L V K V ++ G+ P ATY L +++Y R
Sbjct: 302 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRA------- 354
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK-----IKS 424
WE +I ++ ME GV ++ V+ + + G WQ A V+ + ++
Sbjct: 355 GRWESARI-----LLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQP 409
Query: 425 LRHSKPLEITFTGLIISSMDG----GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 479
RH F ++I + GH D F M++ EP++ T N ++ + +
Sbjct: 410 DRH-------FYNVMIDTFGKYNCLGHAMDA---FNRMREEGIEPDVVTWNTLIDAHRKG 459
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
+A ELFEE +N P TY+ M+ +W E +
Sbjct: 460 GRHDRAMELFEEMRESNC-------------PPGTTTYNIMINLLGEQERWVGVETMLSE 506
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
M G + + L+ R+G+ + + G P P + L+ A Q
Sbjct: 507 MKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMY-HALVNAYAQRG 565
Query: 600 Y-EKAVALINAM 610
+ A+ ++ AM
Sbjct: 566 LADHALNVVKAM 577
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 132/340 (38%), Gaps = 55/340 (16%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
T L++ LG AGR EA +F + P AY+++ ++G LK ++++ M
Sbjct: 274 TALISALGGAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMS 333
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
D + PD Y+ +++A + +W+ + K++ G+KPS+
Sbjct: 334 ---------------DCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYV 378
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
+ + +R + G +A A +R M GV Y +
Sbjct: 379 FSRILAGFR------------DRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNC 426
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 470
AM +++ +P +T+ LI + GG D + +F+ M++ +C P T N
Sbjct: 427 LGHAMDAFNRMRE-EGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYN 485
Query: 471 AMLKVYSRND-------MFSKAKE------LFEETTRANSSGYT-----------FLSGD 506
M+ + + M S+ KE + TT + G + + D
Sbjct: 486 IMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKAD 545
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
G LKP Y +++ A A ++ V K M G +
Sbjct: 546 G--LKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLE 583
>gi|297808589|ref|XP_002872178.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318015|gb|EFH48437.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 172/424 (40%), Gaps = 75/424 (17%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG---QVGL 279
R ++SR TKL+ +L + GRPHEA +F + E + P + +Y ++ + Q G
Sbjct: 37 RTVRSR---TKLMNVLIERGRPHEAQTVFKTLAETGH-RPSLISYTTLLAAMTVQKQYGS 92
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L +V +E+ KP D + +NAV+NA S + +
Sbjct: 93 LSSIVSEVEQSGTKP------------------DSIFFNAVINAFSESGNMEDAVQALLK 134
Query: 340 LRKSGLKPSAAT-------YGLAMESYRRCLL-------------------KVLVRAFWE 373
+++ GL P+ +T YG+A + R L VLV+A+ +
Sbjct: 135 MKELGLNPTTSTYNTLIKGYGIAGKPERSSALLDLMLEESNVDVRPNIRTFNVLVQAWCK 194
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLE 432
+ K+ EA V ME+ GV Y +A C G A VVEK+ +KP
Sbjct: 195 KKKVEEAWEVVHKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 254
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI----GTVNAMLKVYSRNDMFSKAKE 487
T ++ G + D + + MK+ E N+ +N ++V R D +
Sbjct: 255 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR-DGIDEVLT 313
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
L +E +K D TYS+++ A ++A E V+K M +G +
Sbjct: 314 LMKECN----------------VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 357
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 607
D ++ L RA + E ++L+ P+ + FT ++ + + A+ +
Sbjct: 358 DAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSSGSMDDAMRVF 416
Query: 608 NAMA 611
N M
Sbjct: 417 NKMC 420
>gi|297724885|ref|NP_001174806.1| Os06g0499301 [Oryza sativa Japonica Group]
gi|52076487|dbj|BAD45366.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|125597333|gb|EAZ37113.1| hypothetical protein OsJ_21452 [Oryza sativa Japonica Group]
gi|255677074|dbj|BAH93534.1| Os06g0499301 [Oryza sativa Japonica Group]
Length = 642
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 182/442 (41%), Gaps = 51/442 (11%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+F Y+ +++ L AGR +A+ + + M+ D + + A++ V + + G +K KL
Sbjct: 209 KFTYSTVVSALADAGRVDDAVALVHEMVADGVVAAE--AFNPVLRAMLRAGDVKGAAKLF 266
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
M+ K P YN +++ + + V +++ + G+ P
Sbjct: 267 GFMQLKGCV---------------PTTATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVP 311
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
TYG ++ RC G++ +A ME+ G+ VY + C
Sbjct: 312 GVMTYGAVVDGLVRC------------GRVKDAWKVAEEMERNGLAWNEFVYSTVITGFC 359
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
+G A+ V E + + +P + ++ +I + G + + +F+ M C PNI
Sbjct: 360 KSGEIDCALKVWEAMVA-SPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNI 418
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T ++++ Y + S+A ++EE GA P+ +YS ++
Sbjct: 419 ITYGSIIQGYFKIGDTSRALSVWEEMI-------------GAGCVPNAVSYSILINGLCN 465
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI-PHPL 585
+ + V+K M GC D + ++ +G F +L +G P +
Sbjct: 466 VGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVI 525
Query: 586 FFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRISRDKLEKLL 642
+ +L ++ + +A+ L+N M P +T + F + E R R+ LE L+
Sbjct: 526 SYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIFLREFGAGE-RKGREFLEGLV 584
Query: 643 NALCN--CNAASSEITVSNLSR 662
LC+ N A+ E+ + L++
Sbjct: 585 VRLCDRRRNMAAGEVLMVMLAK 606
>gi|168011113|ref|XP_001758248.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690704|gb|EDQ77070.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 658
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 126/274 (45%), Gaps = 32/274 (11%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
++F++ L+ GK GR +A+R F M ++ PD+ ++S+ + GL+ E + L
Sbjct: 358 NQFIFNILIDTYGKFGRLPQAMRTFAQMDKE-GFKPDVVTWNSLIEAHCRAGLITEALDL 416
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+++M+++ P L YN +LNA ++WK + + ++R GL
Sbjct: 417 LKQMQERECV---------------PSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLD 461
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P+ TY LV ++ + EA ++ M+ +G+ + SVY LA
Sbjct: 462 PNVVTY------------TTLVDSYGTSKRYREASEYLKQMKSQGLQPSTSVYCALANSY 509
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD-GGHIDDCISIFQHMKD-HCEP 464
G + AM V + ++ + L ++ L+I++ G + S+F ++ + P
Sbjct: 510 AKRGLCEQAMEVFKSME--KDGVELNLSMLNLLINAFGVAGKYVEAFSVFDYILEVGMSP 567
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
++ T ++K + + + +++E+ RA +
Sbjct: 568 DVVTYTTLMKALIKAEQLDQVPDVYEQMVRAGCT 601
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 174/404 (43%), Gaps = 56/404 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y ++ +AG P +A + LM + C+L PD+ +Y S+ TL V L +
Sbjct: 186 LYNDVINAYCRAGDPDKAFQYMGLM-QACDLVPDVRSYSSLIETLVVVRRLDDAEAAYAE 244
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ K K +L NA+L+A + V + + +GLK S
Sbjct: 245 MKSKSYK---------------INLRTLNALLSAYTRKSLLEQVEKLMQDAEDAGLKLST 289
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+YGL +++Y R G++++A AA NM+ V A +Y L N
Sbjct: 290 FSYGLLIDAYSRA------------GRLDQAKAAFHNMKVENVPANAFIYSRLMVAYRNA 337
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
+W + +++ + + + KP + F LI + G + + F M K+ +P++ T
Sbjct: 338 RQWDGTIRLLKDMYA-SNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVT 396
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANS--SGYTF---LSGDG---------------- 507
N++++ + R + ++A +L ++ S +T+ L+ G
Sbjct: 397 WNSLIEAHCRAGLITEALDLLKQMQERECVPSLHTYNIILNALGWHNRWKEMALLLDEMR 456
Query: 508 -APLKPDEYTYSSMLEASATAHQW-EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
L P+ TY++++++ T+ ++ E EY+ K M G Q + + L ++ G C
Sbjct: 457 FKGLDPNVVTYTTLVDSYGTSKRYREASEYL-KQMKSQGLQPSTSVYCALANSYAKRGLC 515
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAI-VQSNYEKAVALIN 608
F S+ + G + L +LI A V Y +A ++ +
Sbjct: 516 EQAMEVFKSMEKDG-VELNLSMLNLLINAFGVAGKYVEAFSVFD 558
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/278 (18%), Positives = 113/278 (40%), Gaps = 46/278 (16%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY--RRCLLKVL 367
+ P + YNA++ C + + + Q+R SG +P Y L ++ +R + V+
Sbjct: 109 VSPGPMAYNAIVGTCAREDRLETALELMNQMRGSGFQPDNVNYTLVFQACAKKRVGVDVI 168
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG------RWQDAMLVVEK 421
R N+EQ G+ +Y ++ C G ++ M +
Sbjct: 169 SR-------------VCANIEQEGLEMDTKLYNDVINAYCRAGDPDKAFQYMGLMQACDL 215
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRND 480
+ +R +++ LI + + +DD + + MK + N+ T+NA+L Y+R
Sbjct: 216 VPDVR-------SYSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLNALLSAYTRKS 268
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
+ + ++L ++ + A LK ++Y +++A + A + + + + M
Sbjct: 269 LLEQVEKLMQD-------------AEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNM 315
Query: 541 ALSGCQLDQTKHAWLLVEASRA----GKCHLLEHAFDS 574
+ + ++ L+V A G LL+ + S
Sbjct: 316 KVENVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYAS 353
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 154/373 (41%), Gaps = 60/373 (16%)
Query: 213 LDWVYG----LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
LD YG + D+ L + Y+ ++A L KA +A+ + M+++ + P+ Y+
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKN-GVMPNCRTYN 273
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
S+ G KE + +++M +EPD+V YN++++ +
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDG---------------VEPDVVTYNSLMDYLCKNG 318
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESY--------RRCLLKVLVR----------- 369
+ +F + K GLKP TYG ++ Y LL ++VR
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378
Query: 370 ----AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
A+ ++GK+++A+ M Q+G+ Y + LC +GR +DAM E++
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFS 483
R S P I + LI S D + M D C I N+++ + +
Sbjct: 439 RLS-PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI-FFNSIIDSHCKEGRVI 496
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
++++LF+ R +KPD TYS++++ A + + + M
Sbjct: 497 ESEKLFDLMVRIG-------------VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543
Query: 544 GCQLDQTKHAWLL 556
G + D + L+
Sbjct: 544 GMKPDCVTYNTLI 556
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 164/423 (38%), Gaps = 63/423 (14%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L + + K + + M ++G+M ++ G G ++A+ L ++
Sbjct: 240 IIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDG 299
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D+ + Y L+ L K GR EA ++F+ M + L P+I Y ++ G L
Sbjct: 300 VEPDVVT---YNSLMDYLCKNGRCTEARKMFDSMTKR-GLKPEITTYGTLLQGYATKGAL 355
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E+ L++ M + + P+ V++ ++ A + VF ++
Sbjct: 356 VEMHGLLDLMVRNG---------------IHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 341 RKSGLKPSAATYGL-------------AMESYRRCL----------LKVLVRAFWEEGKI 377
R+ GL P TYG AM + + + L+ + K
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR---HSKPLEIT 434
++A + M RG+ + + C GR ++ EK+ L KP IT
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIES----EKLFDLMVRIGVKPDIIT 516
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
++ LI G +D+ + M +P+ T N ++ Y + A LF E
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM- 575
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
SSG + PD TY+ +L+ + + +Y G+ SG QL+ + +
Sbjct: 576 --ESSG----------VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYN 623
Query: 554 WLL 556
+L
Sbjct: 624 IIL 626
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/283 (17%), Positives = 107/283 (37%), Gaps = 29/283 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG--LKPSAATYGLAMESYRRCLLKVLVR 369
P++ YN +L ++ + + + + G P +Y ++
Sbjct: 160 PNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSY------------TTVIN 207
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
F++EG +++A M RG++ Y + LC AM V+ +
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK-NGVM 266
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+ ++ G + I + M D EP++ T N+++ +N ++A+++
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F+ T+ LKP+ TY ++L+ AT + M +G +
Sbjct: 327 FDSMTKRG-------------LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ ++ GK F + + G P + + ++
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/444 (20%), Positives = 184/444 (41%), Gaps = 64/444 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLM 254
L++ L +GS V W +K++++ +R +Y ++ + + R +A +F
Sbjct: 120 LIRELTQRGSIEHCNLVFSW---MKNQKNYCARTDIYNMMIRLHARHNRTDQARGLF-FE 175
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
++ C PD Y+++ G+ G + + +++ M + + P
Sbjct: 176 MQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLR---------------AAIPPSR 220
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
YN ++NAC S WK V K++ +G+ P T+ +++ AF
Sbjct: 221 STYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTH------------NIMLTAFKSG 268
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR-HSKPLEI 433
+ ++A++ ++ + + + + CL ++ A+ + +K + P +
Sbjct: 269 TQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVV 328
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
TFT +I GHI++C + F M + +PNI + NA+L Y+ M ++A ++F E
Sbjct: 329 TFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEI 388
Query: 493 T----RANSSGYT-FLSGDGAP-----------------LKPDEYTYSSMLEASATAHQW 530
R + YT L+ G LKP+ +Y+++++A +
Sbjct: 389 KQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLL 448
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP----HPLF 586
E + + M + LL R G+ + D++L A E+ + +
Sbjct: 449 EDAIEILREMEQDKIHPNVVSICTLLAACGRCGQ----KVKIDTVLSAAEMRGIKLNTVA 504
Query: 587 FTEMLIQAIVQSNYEKAVALINAM 610
+ + I Y+KA+ L N+M
Sbjct: 505 YNSAIGSYINVGEYDKAIDLYNSM 528
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 167/411 (40%), Gaps = 62/411 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+T ++ + G FN+ML + L P+I +Y+++ G+ E +++
Sbjct: 329 TFTSMIHLYSVCGHIENCEAAFNMMLAE-GLKPNIVSYNALLGAYAARGMENEALQVFNE 387
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
++Q PD+V Y ++LNA S + + +FK ++++ LKP+
Sbjct: 388 IKQNG---------------FRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNI 432
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV-VGTASVYYELACC-LC 407
+Y L+ A+ G + +A+ +R MEQ + S+ LA C C
Sbjct: 433 VSYN------------ALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRC 480
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
D +L +++ ++ + + + I S ++ G D I ++ M K + +
Sbjct: 481 GQKVKIDTVLSAAEMRGIKLNT---VAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDS 537
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEE--------------------TTRANSSGY------ 500
T ++ + F +A EE + +A++ G
Sbjct: 538 VTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAES 597
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
TF PD TY++ML+A A +WE +++ M + +LD A L+ +
Sbjct: 598 TFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFN 657
Query: 561 RAGKCHLLEHAFDSLLEAGEIP-HPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ G+ + S+ E +IP F EM+ + +++ AV +I M
Sbjct: 658 KGGQPGRVLSLAQSMREK-DIPLSDTIFFEMVSACGLLHDWKTAVDMIKYM 707
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 99/456 (21%), Positives = 181/456 (39%), Gaps = 57/456 (12%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
DL+ R T+L I + H+A+ +F M++ +P I ++ LL +
Sbjct: 51 DLRERLSKTRLRDI-----KLHDAINLFREMVKT-RPFPSIVDFNR---------LLSAI 95
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
VK+ K + ++ +K + DL +N V+N Q V ++ K
Sbjct: 96 VKM------KKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKL 149
Query: 344 GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
G +P T G LV F ++++AV+ V M + G Y +
Sbjct: 150 GYEPDRVTIG------------SLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAII 197
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHC 462
LC R DA+ ++I + +P +T+T L+ + G +D + + M K
Sbjct: 198 DSLCKTRRVNDALDFFKEIGR-KGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKI 256
Query: 463 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
PN+ T +A+L + +N +AKE+FEE R + + PD TYSS++
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMS-------------IDPDIVTYSSLIN 303
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ + ++ M GC D + L+ +A + F + + G +
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVN 363
Query: 583 HPLFFTEMLIQAIVQ-SNYEKAVALINAMAYAPFHITERQWTE--LFESNEDRISRDKLE 639
+ + + LIQ Q + +KA + M F ++ WT L D LE
Sbjct: 364 NTVTYNT-LIQGFFQVGDVDKAQEFFSQM--DSFGVSPDIWTYNILLGGLCD---NGLLE 417
Query: 640 KLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 675
K L + + ++ + + + +C++ K D
Sbjct: 418 KALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVED 453
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 122/304 (40%), Gaps = 38/304 (12%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+V YNA++++ + + FK++ + G++P+ TY LV
Sbjct: 188 PDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTY------------TALVNGL 235
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KP 430
G+ N+A +R+M +R + Y L NG+ +A + E++ +R S P
Sbjct: 236 CNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEM--VRMSIDP 293
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+T++ LI ID+ +F M C P++ + N ++ + + +LF
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 490 EETTR----ANSSGY-TFLSG-----------------DGAPLKPDEYTYSSMLEASATA 527
+ ++ N+ Y T + G D + PD +TY+ +L
Sbjct: 354 RKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDN 413
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
E +++ M S LD + ++ + GK F SL G P + +
Sbjct: 414 GLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTY 473
Query: 588 TEML 591
T M+
Sbjct: 474 TTMM 477
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/418 (20%), Positives = 166/418 (39%), Gaps = 59/418 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F+Y L+ L + R +A ++F+ M + NL I Y+++ +VG L K+ E
Sbjct: 212 FIYNVLIGGLCREKRIRDAEKMFDEMC-NINLVGSIVTYNTLIDGYCKVGELDAAFKMRE 270
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
RM++K + P+++ +N++L+ + K + K++ +G P
Sbjct: 271 RMKEKS---------------VAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPD 315
Query: 349 AATYGL-------------AMESYRRCLLK----------VLVRAFWEEGKINEAVAAVR 385
TY + AME Y + K +L+ ++GK+ +A ++
Sbjct: 316 GYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILK 375
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
+ G+V +Y C G A+L +E+++S +P ITF LI D
Sbjct: 376 KFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESF-GLRPNSITFNSLIDKFCDM 434
Query: 446 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+D + M + P++ T N ++ Y + F + ++ E+
Sbjct: 435 KEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIG-------- 486
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+KP+ +Y S++ + E V + M G + + L+ + GK
Sbjct: 487 -----VKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGK 541
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ----SNYEKAVALINAMAYAPFHIT 618
FD ++ + EI L +LI + + + E + I + ++P IT
Sbjct: 542 VKDALRFFDEMMRS-EISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVIT 598
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 150/391 (38%), Gaps = 92/391 (23%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ- 292
LL L K G+ +A I E+ L D Y++ ++G + + + IERM
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTEN-GLVADEVIYNTFVNGYCRIGDMNKAILTIERMESF 415
Query: 293 -----------------------KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
K + +K M K P +E YN +++
Sbjct: 416 GLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVE----TYNTLIDGYGKLCT 471
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+ F + +Q+ + G+KP+ +YG L+ ++GKI EA +R+M
Sbjct: 472 FDRCFQILEQMEEIGVKPNVVSYG------------SLINCLCKDGKILEAEIVLRDMIC 519
Query: 390 RGVVGTASVYYEL---ACC--------------------------------LCNNGRWQD 414
RGV+ A VY L +C LC G+ +
Sbjct: 520 RGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTE 579
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAML 473
A + +I S HS P IT+ LI + G++ C+ +++ MK+ +P + T + ++
Sbjct: 580 AEDFLTQITSSGHS-PDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLI 638
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
S+ + ++L+ E + N L PD Y++M+ A +
Sbjct: 639 SGCSKEGI-ELVEKLYNEMLQMN-------------LLPDRVVYNAMIHCYAEIGNTQKA 684
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+++GM G D+ + L++ R GK
Sbjct: 685 YSLHQGMLDQGIHPDKMTYNSLILGHFREGK 715
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 66/345 (19%), Positives = 123/345 (35%), Gaps = 27/345 (7%)
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAV 384
V Q+ V +F ++ SG + Y A ++A + + + +
Sbjct: 152 VNEKQFVKVVDLFMEIENSGFRTDTFMYAKA------------IQAAVKLQNLKMGMEFL 199
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
+M +RGV +Y L LC R +DA + +++ ++ + +T+ LI
Sbjct: 200 DSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSI-VTYNTLIDGYCK 258
Query: 445 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
G +D + + MK+ PNI T N++L + +A+ L +E +G+
Sbjct: 259 VGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKE---MEVNGFM-- 313
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
PD YTYS + + +Y+ G +++ + LL + G
Sbjct: 314 --------PDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQG 365
Query: 564 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 623
K E E G + + + + + KA+ I M +
Sbjct: 366 KVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFN 425
Query: 624 ELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALC 668
L + D DK E+ + + S T + L LC
Sbjct: 426 SLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLC 470
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 96/250 (38%), Gaps = 43/250 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL KG +A L + D+ Y L++ AG + L ++ M
Sbjct: 567 LIDGLCKKGKLTEAEDFLTQITSSGHSPDV---ITYNSLISGYANAGNVSKCLGLYETM- 622
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ + P + YH + G KE ++L+E++ + M + N L PD V
Sbjct: 623 KNLGIKPTVRTYHPLIS-----GCSKEGIELVEKLYNE-------MLQMN----LLPDRV 666
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG-LAMESYRRCLLK--------- 365
VYNA+++ + + + + + G+ P TY L + +R L
Sbjct: 667 VYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNM 726
Query: 366 -------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
+LV+ + + A R M + + AS+ EL L GR
Sbjct: 727 KAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRL 786
Query: 413 QDAMLVVEKI 422
Q+ ++ ++
Sbjct: 787 QEVQVICSEM 796
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 140/334 (41%), Gaps = 44/334 (13%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
++PD ++++ L G +KE V+L M +K H EP+++ Y
Sbjct: 159 IHPDAITFNALINGLCNEGKIKEAVELFNEM-------VKRGH--------EPNVISYTT 203
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
V+N + VFK++ ++G KP+ TY ++ + ++ +N+
Sbjct: 204 VINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTY------------STIIDSLCKDRLVND 251
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
A+ + M +RG+ Y + CN G+ +A + +++ R P +TFT L+
Sbjct: 252 AMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVG-RDVMPNTVTFTILV 310
Query: 440 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
G + + +F+ M + EP+I T NA++ Y + ++AK++FE R +
Sbjct: 311 DGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCA 370
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
P ++Y+ ++ + + + + + M D ++ L+
Sbjct: 371 -------------PGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQG 417
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 592
+ G+ + F + G PHP T +++
Sbjct: 418 LCQLGRPKEALNLFKEMCSYG--PHPNLVTYVIL 449
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 43/296 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++ G+ +EA R+F M+ ++ P+ + + L + G++ E + E
Sbjct: 269 FTYNSIVHGFCNLGQLNEATRLFKEMVGR-DVMPNTVTFTILVDGLCKEGMVSEARLVFE 327
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +K +EPD+ YNA+++ VF+ + + G P
Sbjct: 328 TMTEKG---------------VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPG 372
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
A +Y +L+ + + +++EA + + M + + Y L LC
Sbjct: 373 AHSY------------NILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ 420
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 467
GR ++A+ + +++ S P +T+ L+ GH+D+ + + + MK+ EPNI
Sbjct: 421 LGRPKEALNLFKEMCSY-GPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIV 479
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+++ AKELF + L GDG +PD TY+ M++
Sbjct: 480 HYTILIEGMFIAGKLEVAKELFSK-----------LFGDGT--RPDIRTYTVMIKG 522
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 117/298 (39%), Gaps = 36/298 (12%)
Query: 144 EWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDK 203
E EK + L+D + + + K IM + G L+ G
Sbjct: 327 ETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKS 386
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNL--Y 261
+A S+L +Y D + Y+ L+ L + GRP EAL +F E C+ +
Sbjct: 387 RRMDEAKSLLAEMYHKALNPDTVT---YSTLMQGLCQLGRPKEALNLFK---EMCSYGPH 440
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P++ Y + + G L E +KL++ M++K LEP++V Y ++
Sbjct: 441 PNLVTYVILLDGFCKHGHLDEALKLLKSMKEKK---------------LEPNIVHYTILI 485
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
+ + + +F +L G +P TY V+++ +EG +EA
Sbjct: 486 EGMFIAGKLEVAKELFSKLFGDGTRPDIRTY------------TVMIKGLLKEGLSDEAY 533
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
R ME G + + Y + N A+ +++++ R S L TF L+
Sbjct: 534 DLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLS-TFQMLL 590
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/406 (17%), Positives = 169/406 (41%), Gaps = 53/406 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y+ ++ L K+G+ +A R+ M+ P++ Y S+ L + G L E L++
Sbjct: 949 FTYSTIVDSLVKSGKVDDACRLVEDMVSK-GCSPNVVTYSSLLHGLCKAGKLDEATALLQ 1007
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
RM + P++V YN +++ + + + +++ G +P+
Sbjct: 1008 RMTRSGC---------------SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 1052
Query: 349 AATYGLAMESYRRC--------LLKVLVR---------------AFWEEGKINEAVAAVR 385
TY + ++++ +C L++V+V F ++ ++ A +
Sbjct: 1053 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 1112
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
+M Q+G V Y + LC + + +L++E++ S + P +TF +I +
Sbjct: 1113 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS-NNCVPDIVTFNTIIDAMCKT 1171
Query: 446 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+D +F +++ C PN+ T N+++ ++ F +A+ L E TR
Sbjct: 1172 YRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGC------ 1225
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
PD TY+++++ + + + ++ M G D ++ ++ +
Sbjct: 1226 ------SPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 1279
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ + +L+ G P + + ++ N +KA+ ++ +
Sbjct: 1280 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLL 1325
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/529 (19%), Positives = 193/529 (36%), Gaps = 56/529 (10%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E +W + L+ ++ MN+ GL G +L+GL D G
Sbjct: 154 EGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCS 213
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
A+ + K Y ++ L K+ R +A+R+ M+++ P++ +Y
Sbjct: 214 DAV----LHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDN-GFAPNVFSY 268
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++V + ++ + L+E+M + PD+V Y V+N
Sbjct: 269 NTVLHGFCKANRVENALWLLEQMVTRGCP---------------PDVVSYTTVINGLCKL 313
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
Q V ++ + G +P+ TYG LV F G ++ AV VR M
Sbjct: 314 DQVDEACRVMDKMIQRGCQPNVITYG------------TLVDGFCRVGDLDGAVELVRKM 361
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+RG A Y + C + A V++ + P I ++ +I G
Sbjct: 362 TERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQ-TGCPPDAINYSTIISGFCKAGK 420
Query: 448 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
+ + + + M + C P++ ++ ++ + A+EL +
Sbjct: 421 LREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSI------------- 467
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL---LVEASRAG 563
G PD YS ++ A A + E M + C D + + L ++ R
Sbjct: 468 GMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRIN 527
Query: 564 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 623
LL FD + AG +P + ++ ++ +N + A ++ M A ++
Sbjct: 528 DAFLL---FDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYS 584
Query: 624 ELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEK 672
L + DK + + C A + +T + L + LC+ K
Sbjct: 585 ALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTL---IDGLCKINK 630
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/481 (19%), Positives = 180/481 (37%), Gaps = 55/481 (11%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NL 253
K+L+G+ + + A+ DW + + LL L + RP +AL+++ N
Sbjct: 816 KVLQGVRNGDA---ALGFFDWATSQEGYN--HDTYTCNCLLQALLRLKRPKDALQVYRNK 870
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
+ N++ H + G +G EL +K M R + +
Sbjct: 871 LCCSPNMFTFTILIHGLCRA-GDIGTAYEL--------------LKEMPRHG----VPQN 911
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSG-LKPSAATYGLAMESYRRCLLKVLVRAFW 372
++++N V+ + + +FK++ +SG P TY +V +
Sbjct: 912 VILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTY------------STIVDSLV 959
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
+ GK+++A V +M +G Y L LC G+ +A +++++ + P
Sbjct: 960 KSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM-TRSGCSPNI 1018
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+T+ +I G ID+ + + M D C+PN+ T +L + + A L E
Sbjct: 1019 VTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEV 1078
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
GY P+ +TY+S+L+ + E + M GC +
Sbjct: 1079 MVE---KGYV----------PNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVS 1125
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ ++ +A K H + +L +P + F ++ + A L N +
Sbjct: 1126 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 1185
Query: 612 YAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSE 671
+ + L D+ E LL + S +I N + LC+S+
Sbjct: 1186 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYN--TVIDGLCKSK 1243
Query: 672 K 672
+
Sbjct: 1244 R 1244
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/425 (19%), Positives = 153/425 (36%), Gaps = 83/425 (19%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E+ +R A ++ R + + +++M Q+G ++ G G R
Sbjct: 363 ERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLR 422
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAA 266
+A +L+ + + D+ + L+ L KA A + + + DC PD+ A
Sbjct: 423 EAHDLLEQMIRRGCRPDVAC---LSTLIDALCKAAAIDSAQELLRMSIGMDCA--PDVVA 477
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y + L + L E ++ M +KN PD+V YN+V++
Sbjct: 478 YSILIHALCKAKRLPEAESWLDVM-------VKNR--------CYPDVVTYNSVVDGLCK 522
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRN 386
S + F +F ++R +G+ P TY + + S+
Sbjct: 523 SRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSF--------------------------- 555
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
C + A ++E++K + P +T++ LI G
Sbjct: 556 --------------------CKDNNLDSAFKMLERMKEAK-CVPDVVTYSALINGLCKAG 594
Query: 447 HIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
+D +FQ M C PN+ T N ++ + + +A E+ E + + +
Sbjct: 595 TVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCT------- 647
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
PD TY+ ++ A + E V + M GC D+ + LL +
Sbjct: 648 ------PDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNL 701
Query: 566 HLLEH 570
L+E
Sbjct: 702 ELVEQ 706
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 129/331 (38%), Gaps = 50/331 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ---VGLLKELVKLI 287
Y ++A L KA + HE + + ML + N PDI ++++ + + V + EL LI
Sbjct: 1126 YNTVIAGLCKATKVHEGVLLLEQMLSN-NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLI 1184
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL-RKSGLK 346
+ + P+LV YN++++ S ++ ++ +++ RK G
Sbjct: 1185 Q------------------ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCS 1226
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P TY ++ + +++ A M G+ Y + L
Sbjct: 1227 PDIITY------------NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSL 1274
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 465
C R+ D V ++ P IT+ LI G++D + I Q + P+
Sbjct: 1275 CK-WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPD 1333
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T + + S+ +A EL E RA L PD TY+++L+
Sbjct: 1334 VVTFSIFIDWLSKRGRLRQAGELLETMLRAG-------------LVPDTVTYNTLLKGFC 1380
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
A E +++ M GC+ D + L+
Sbjct: 1381 DASLTEDAVDLFEVMRQCGCEPDNATYTTLV 1411
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 142/364 (39%), Gaps = 41/364 (11%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
++ N +LN V +HQ+ +F+ + TY L+ F
Sbjct: 125 EIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTY------------STLISGFI 172
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
GKI A M ++G+ A V+ + LC+ G+ DA+L ++ + P
Sbjct: 173 RAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS--KTCPPDS 230
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+T+ +I +DD I + + M D+ PN+ + N +L + + + A L E+
Sbjct: 231 VTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQ 290
Query: 492 -TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
TR G P PD +Y++++ Q + V M GCQ +
Sbjct: 291 MVTR------------GCP--PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVI 336
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ L+ R G + E G P+ + + ++ +++ E+A ++ M
Sbjct: 337 TYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMM 396
Query: 611 ---AYAPFHITERQWTELF-ESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 666
P I F ++ + R + D LE+++ C + A LS + A
Sbjct: 397 IQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVAC-------LSTLIDA 449
Query: 667 LCRS 670
LC++
Sbjct: 450 LCKA 453
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 172/433 (39%), Gaps = 51/433 (11%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
KLL + + +S+ + + L+ DL S Y L+ + + AL + M
Sbjct: 69 KLLSAIAKMNKFDLVISLGERMQNLRISYDLYS---YNILINCFCRRSQLPLALAVLGKM 125
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM---RQKPSKRIKN-------MHRK 304
++ PDI S+ + E V L+++M +P+ N +H K
Sbjct: 126 MK-LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 184
Query: 305 NWDPV----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ V +PDL Y V+N + K++ K ++ Y
Sbjct: 185 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY-- 242
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
++ A +N+A+ M+ +G+ Y L CLCN GRW D
Sbjct: 243 ----------TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 292
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 473
A ++ + R P +TF+ LI + + G + + ++ M K +P+I T ++++
Sbjct: 293 ASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 351
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
+ +D +AK +FE +S D P+ TY+++++ A + E
Sbjct: 352 NGFCMHDRLDEAKHMFE----------LMISKDCF---PNVVTYNTLIKGFCKAKRVEEG 398
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 593
+++ M+ G + + L+ +AG C + + F ++ G P + ++ +L
Sbjct: 399 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 458
Query: 594 AIVQSNYEKAVAL 606
EKA+ +
Sbjct: 459 LCKYGKLEKALVV 471
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 160/398 (40%), Gaps = 49/398 (12%)
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
+FT G ++ GL +G A+S+L + K + D+ +YT ++ L ++
Sbjct: 204 LFTYGT---VVNGLCKRGDIDLALSLLKKMEKGKIEADV---VIYTTIIDALCNYKNVND 257
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
AL +F M ++ + P++ Y+S+ L G + +L+ M + RK
Sbjct: 258 ALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM----------IERK-- 304
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
+ P++V ++A+++A V + ++ ++ K + P TY
Sbjct: 305 ---INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY------------SS 349
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L+ F +++EA M + Y L C R ++ M + ++ S R
Sbjct: 350 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-SQR 408
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
+T+ LI G D IF+ M D P+I T + +L + KA
Sbjct: 409 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 468
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+FE ++ ++PD YTY+ M+E A + E ++ ++L G
Sbjct: 469 LVVFEYLQKSK-------------MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 515
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
+ + + ++ R G + F + E G +P+
Sbjct: 516 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 553
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 99/488 (20%), Positives = 189/488 (38%), Gaps = 67/488 (13%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
S YT LL + K+ EA+ + + M + C P+I Y+ + + + G + + +
Sbjct: 186 SVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCT--PNIVTYNVIINGMCREGRVDDAKE 243
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
++ R+ +PD+V Y VL + +W V +F ++
Sbjct: 244 ILNRLSSYG---------------FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKC 288
Query: 346 KPSAATYGLAMESYRR------------------C-----LLKVLVRAFWEEGKINEAVA 382
P+ T+ + + + R C L +++ A ++G++++A
Sbjct: 289 VPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYD 348
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIIS 441
+ NM G Y + LC GRW+ A L+ E ++ ++ P E+TF I
Sbjct: 349 FLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVR--KNCPPNEVTFNTFICI 406
Query: 442 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
G I+ I + + M ++ C I T NA++ + A ELF
Sbjct: 407 LCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELF----------- 455
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
+ P +P+ TY+++L A + + + M C L+ L+
Sbjct: 456 -----NNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFC 510
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 620
+ G + ++E G P+ + F +L N E+A+ L++ + +
Sbjct: 511 QKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLD-- 568
Query: 621 QWTELFESNEDRISR-DKLEKLLNALCNCNAASSEITVSNLSRALHALC-RSEKERDLSS 678
T + S D +SR D+ E+ + L V ++ L ALC R E ++ +
Sbjct: 569 --TITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDF 626
Query: 679 SAHFGSQA 686
A+ S
Sbjct: 627 FAYMVSNG 634
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 134/354 (37%), Gaps = 36/354 (10%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+P +V Y +L A S + V ++R G P+ TY V++
Sbjct: 184 QPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTY------------NVIING 231
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
EG++++A + + G Y + LC RW D ++ ++ + P
Sbjct: 232 MCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVD-KKCVP 290
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
E+TF L+ GG ++ I + Q M H C PN N ++ + A
Sbjct: 291 NEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDA---- 346
Query: 490 EETTRANSSGYTFLSGDGA-PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
Y FL+ G PD +Y+++L A +WE+ + + M C +
Sbjct: 347 ----------YDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPN 396
Query: 549 QTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
+ + + G L+E A + + E G + + ++ VQ + A+
Sbjct: 397 EVTFNTFICILCQKG---LIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALE 453
Query: 606 LINAMAYAPFHITERQ-WTELFESNEDRISRDKLEKLLNALCNCNAASSEITVS 658
L N + P IT T L + + + L +++ C NA + + VS
Sbjct: 454 LFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVS 507
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 162/381 (42%), Gaps = 63/381 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y +L+ L +AGR EA+ +F M +DC YP++ Y L+K L + +
Sbjct: 261 YNQLIHGLCEAGRIDEAVSLFVRMKDDC-CYPNVYTY---------TALIKGLCR---KN 307
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K + M +N L PDL+ YN+++ + + + +++ GL P
Sbjct: 308 VHKAMGLLDEMLERN----LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQR 363
Query: 351 TYGLAM---------ESYRR--------------CLLKVLVRAFWEEGKINEAVAAVRNM 387
TYG + E RR + VL+ + + GK++EA M
Sbjct: 364 TYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKM 423
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+ A + L LC+ G ++A+ + +++ + KP TF LI + G
Sbjct: 424 LSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMG-LKPTVYTFNILIGRMLKQGD 482
Query: 448 IDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
DD Q M E P T NA ++VY +A+++ + + +
Sbjct: 483 FDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQ-----------MKEE 531
Query: 507 GAPLKPDEYTYSSMLEASA-TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
G P PD++TY+S+++A + F+ V K M + C+ + H +L + K
Sbjct: 532 GVP--PDDFTYTSLIKAYGKLGLTYSAFD-VLKSMFDADCE--PSHHTFLSLIKQLFDKR 586
Query: 566 HLLEHAFDSLLEA----GEIP 582
+++E + ++ +E+ G++P
Sbjct: 587 YVVEKSGETGVESVSNFGDVP 607
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/398 (19%), Positives = 148/398 (37%), Gaps = 59/398 (14%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K++ + + Y + L K+ R EA R+F+ + E+ + ++ Y + +VG
Sbjct: 353 MKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEE-GVSANVIMYSVLIDGYCKVG 411
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ E L E+M K P+ +NA+++ + K +F
Sbjct: 412 KVDEAGCLFEKMLSKNCS---------------PNAYTFNALIHGLCSAGNLKEALSLFD 456
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
Q+ K GLKP+ T+ +L+ ++G ++A ++ M G A
Sbjct: 457 QMVKMGLKPTVYTF------------NILIGRMLKQGDFDDAHKCLQKMMSSGEKPVART 504
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
Y C+ G+ Q+A ++ ++K P + T+T LI + G + + M
Sbjct: 505 YNAFIEVYCSAGKVQEAEDMMVQMKE-EGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSM 563
Query: 459 KD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
D CEP S + S K+LF++ SG T +
Sbjct: 564 FDADCEP------------SHHTFLSLIKQLFDKRYVVEKSGETGVES------------ 599
Query: 518 SSMLEASATAHQWEYFEY-----VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
S ++ W+ E+ +++ M GC D + L+ + +
Sbjct: 600 VSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLL 659
Query: 573 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
D + + G P + F ++ Y +A ++ M
Sbjct: 660 DQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDM 697
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 20/217 (9%)
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
+++ + + G + EA + M Q G+ C + A V E++
Sbjct: 195 FNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMP 254
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMF 482
+ E+++ LI + G ID+ +S+F MKD C PN+ T A++K R ++
Sbjct: 255 NRN-----EVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNV- 308
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
KA L +E N L PD TY+S++ A + + M
Sbjct: 309 HKAMGLLDEMLERN-------------LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKE 355
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 579
G DQ + + ++ + FDSL E G
Sbjct: 356 RGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEG 392
>gi|225430190|ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial [Vitis vinifera]
gi|296081989|emb|CBI20994.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 129/317 (40%), Gaps = 33/317 (10%)
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
++ DP P + VYN +LN S + K +++ +++ +KP+ TYG +E Y
Sbjct: 239 QQRGLDPSWVPSIRVYNVLLNGWFRSRKLKRAEQLWRTMKRENVKPTVVTYGTLVEGY-- 296
Query: 362 CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
C ++ + +A+ V M +G+ VY + L GR+++AM ++E+
Sbjct: 297 CRMR----------RSEKAIELVGEMRGKGIEPNVIVYNPIIDSLAEAGRFKEAMGMMER 346
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 480
+ + P T+ L+ G + + + M +P + T N + +SR
Sbjct: 347 CL-VSETGPTISTYNSLVKGFCKAGDLVGASKVLKMMISRGFDPTLTTYNYFFRYFSR-- 403
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
K +E T+ SG+T PD TY +++ + + V K M
Sbjct: 404 -CGKTEEGMNLYTKMIESGHT----------PDRLTYHLLIKMMCEEERLDLAVQVSKEM 452
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQ 597
GC LD L+ K H LE A F+ ++ G +P L F M +
Sbjct: 453 RARGCDLDLATSTMLV---HLLCKMHRLEEAFAEFEDMIRRGIVPQYLTFERMNNALRKR 509
Query: 598 SNYEKAVALINAMAYAP 614
E A L + MA P
Sbjct: 510 GLTEMARKLCDMMASVP 526
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 132/335 (39%), Gaps = 56/335 (16%)
Query: 132 VQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVD---RLSEREMTAKNWKFVRIMNQSGLMF 188
V++ S+YF + P W VL++ R + + + W+ ++ N +
Sbjct: 230 VRVASEYFDQQRGLDPS--WVPSIRVYNVLLNGWFRSRKLKRAEQLWRTMKRENVKPTVV 287
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL 248
T G +++ R++ ++ V ++ K + VY ++ L +AGR EA+
Sbjct: 288 TYGTLVE------GYCRMRRSEKAIELVGEMRGKGIEPNVIVYNPIIDSLAEAGRFKEAM 341
Query: 249 RIFNLMLEDCNLY---PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
M+E C + P I+ Y+S+ + G +LV SK +K M +
Sbjct: 342 G----MMERCLVSETGPTISTYNSLVKGFCKAG---DLVG--------ASKVLKMMISRG 386
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY------ 359
+DP L YN + + ++ ++ +SG P TY L ++
Sbjct: 387 FDPTL----TTYNYFFRYFSRCGKTEEGMNLYTKMIESGHTPDRLTYHLLIKMMCEEERL 442
Query: 360 ------------RRCLL-----KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
R C L +LV + ++ EA A +M +RG+V + +
Sbjct: 443 DLAVQVSKEMRARGCDLDLATSTMLVHLLCKMHRLEEAFAEFEDMIRRGIVPQYLTFERM 502
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
L G + A + + + S+ HS L T++G
Sbjct: 503 NNALRKRGLTEMARKLCDMMASVPHSSKLPNTYSG 537
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 154/350 (44%), Gaps = 52/350 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ LG G A +V D LK+ K+ + ++ L++ G++G +EA+++F+ M
Sbjct: 196 MISTLGRLGKVELAKAVFD--TALKEGYG-KTVYAFSALISAYGRSGYCNEAIKVFDSMK 252
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLIERMRQ---KPSKRIKN----------- 300
+ L P++ Y++V G+ G+ K++V++ + M +P + N
Sbjct: 253 SN-GLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGL 311
Query: 301 ------MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ D ++ D+ YN +L+A Q F + ++ + P+ TY
Sbjct: 312 WEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYST 371
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
++ Y + G++++A+ M+ GV Y L GR++
Sbjct: 372 MIDGYAKV------------GRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQ 419
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAML 473
A+ V +++++ K + +T+ L+ D+ +F+ MK PN+ T + ++
Sbjct: 420 ALDVCKEMENAGIRKDV-VTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLI 478
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
VYS+ ++ +A E+F E +A LK D YS++++A
Sbjct: 479 DVYSKGGLYKEAMEVFREFKQAG-------------LKADVVLYSALIDA 515
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/359 (18%), Positives = 144/359 (40%), Gaps = 56/359 (15%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ K L + Y+ ++ K GR +AL +FN M + + D +Y+++ ++G
Sbjct: 357 MPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEM-KFLGVGLDRVSYNTLLSVYAKLG 415
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
++ + + + M ++ D+V YNA+L +++ V VF+
Sbjct: 416 RFEQALDVCKEMENAGIRK---------------DVVTYNALLAGYGKQYRYDEVRRVFE 460
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
++++ + P+ TY L+ + + G EA+ R +Q G+ +
Sbjct: 461 EMKRGRVSPNLLTY------------STLIDVYSKGGLYKEAMEVFREFKQAGLKADVVL 508
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
Y L LC NG + ++ +++++ +P +T+ II + C+ +
Sbjct: 509 YSALIDALCKNGLVESSVTLLDEMTK-EGIRPNVVTYNS-IIDAFGRSASAQCV-----V 561
Query: 459 KDHCEPNIGTVNAMLKVYSRNDMFSKAK--------ELF-----EETTRANSSGY----- 500
D E V ++ + + + S+A E+F E+ A +SG
Sbjct: 562 DDSGETTALQVESLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEAKNSGKQEILC 621
Query: 501 ---TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
F +KP+ T+S++L A + +E + + + L Q+ H L+
Sbjct: 622 ILGVFQKMHELKIKPNVVTFSAILNACSRCDSFEDASMLLEELRLFDNQVYGVAHGLLM 680
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 134/310 (43%), Gaps = 36/310 (11%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G + QA+ V + ++D+ Y LLA GK R E R+F M + + P+
Sbjct: 415 GRFEQALDVCKEMENAGIRKDV---VTYNALLAGYGKQYRYDEVRRVFEEM-KRGRVSPN 470
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y ++ + GL KE +++ +Q L+ D+V+Y+A+++A
Sbjct: 471 LLTYSTLIDVYSKGGLYKEAMEVFREFKQAG---------------LKADVVLYSALIDA 515
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-----CLL------KVLVRAFW 372
+ + + ++ K G++P+ TY ++++ R C++ L
Sbjct: 516 LCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTALQVESL 575
Query: 373 EEGKINEAV--AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML--VVEKIKSLRHS 428
+ EA+ A + R + + E AC N+G+ + + V +K+ L+
Sbjct: 576 SSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEAKNSGKQEILCILGVFQKMHELK-I 634
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
KP +TF+ ++ + +D + + ++ G + +L Y R +++ +A+ L
Sbjct: 635 KPNVVTFSAILNACSRCDSFEDASMLLEELRLFDNQVYGVAHGLLMGY-RENVWLQAQSL 693
Query: 489 FEETTRANSS 498
F+E +SS
Sbjct: 694 FDEVKLMDSS 703
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 78/194 (40%), Gaps = 15/194 (7%)
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM-FSKAKELFEET 492
F+ LI + G+ ++ I +F MK + PN+ T NA++ + + F K E+F+
Sbjct: 228 FSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGM 287
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
S+G ++PD T++S+L + WE ++ M G D +
Sbjct: 288 L---SNG----------VQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTY 334
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 612
LL + G+ L + +P+ + ++ M+ + A+ + N M +
Sbjct: 335 NTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKF 394
Query: 613 APFHITERQWTELF 626
+ + L
Sbjct: 395 LGVGLDRVSYNTLL 408
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 82/210 (39%), Gaps = 21/210 (10%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L+ A+ G NEA+ +M+ G++ V Y C G + VVE +
Sbjct: 231 LISAYGRSGYCNEAIKVFDSMKSNGLMPNL-VTYNAVIDACGKGGVEFKK-VVEIFDGML 288
Query: 427 HS--KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 483
+ +P ITF L+ GG + +F M D + +I T N +L +
Sbjct: 289 SNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMD 348
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
A E+ E N + P+ TYS+M++ A + + ++ M
Sbjct: 349 LAFEIMSEMPTKN-------------ILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFL 395
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
G LD+ + LL ++ G+ E A D
Sbjct: 396 GVGLDRVSYNTLLSVYAKLGR---FEQALD 422
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 145/354 (40%), Gaps = 57/354 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F YT+L+ LGKAGR EA F+ M E C PD +++ LG+ G L + +KL
Sbjct: 297 FTYTELIRGLGKAGRLDEAYNFFHEMRREGCR--PDTVLMNNMINFLGKAGRLDDAIKLF 354
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF--WVFKQLRKSGL 345
E M P +V YN ++ A S W F++++ SG+
Sbjct: 355 EEMETLRCI---------------PSVVTYNTIIKALFESKSRVSEISSW-FERMKGSGI 398
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
PS TY +L+ F + + +A+ + M+++G + Y L
Sbjct: 399 SPSPFTY------------SILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDA 446
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 464
L R+ A + +++K S + + +I G +DD + +F M + C P
Sbjct: 447 LGKAKRYDLANELFQELKENCGSSSARV-YAVMIKHLGKAGRLDDAVDLFDEMNRLGCTP 505
Query: 465 NIGTVNAMLKVYSRNDMFSKA----KELFEETTRANSSGYTF----LSGDGAP------- 509
N+ NA++ +R M +A + + + + + Y L+ G P
Sbjct: 506 NVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGML 565
Query: 510 -------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+KPD +Y+++L A + A +E + K M G D ++ +L
Sbjct: 566 CNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSIL 619
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/451 (17%), Positives = 176/451 (39%), Gaps = 48/451 (10%)
Query: 145 WHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL-MFTEGQMLKLLKGLGD 202
W KR + + L+ L E + WK ++ M ++ + + T ++ +++ LG+
Sbjct: 108 WAARKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGN 167
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
+A+++ Y +K ++ + Y ++ +L G + ++N M + +P
Sbjct: 168 AKMISKAVAIF---YQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFP 224
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D Y ++ ++G + L+ M+ D ++P +Y ++
Sbjct: 225 DTVTYSALISAFCKLGRQDSAIWLLNEMK---------------DNGMQPTAKIYTMLMA 269
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA 382
G +F+++R +P TY L+R + G+++EA
Sbjct: 270 LLFKLDNVHGALGLFEEMRHQYCRPDVFTY------------TELIRGLGKAGRLDEAYN 317
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 442
M + G + + L GR DA+ + E++++LR P +T+ +I +
Sbjct: 318 FFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLR-CIPSVVTYNTIIKAL 376
Query: 443 MDG-GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
+ + + S F+ MK P+ T + ++ + + + KA L EE
Sbjct: 377 FESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEM-------- 428
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
D P Y S+++A A +++ +++ + + +A ++
Sbjct: 429 -----DEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLG 483
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+AG+ FD + G P+ + ++
Sbjct: 484 KAGRLDDAVDLFDEMNRLGCTPNVYAYNALM 514
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 86/219 (39%), Gaps = 24/219 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + T K + M++ G L+ LG + A + L
Sbjct: 407 ILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQ---EL 463
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+ S VY ++ LGKAGR +A+ +F+ M P++ AY+++ L + G+
Sbjct: 464 KENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEM-NRLGCTPNVYAYNALMSGLARAGM 522
Query: 280 LKELVKLIERMRQ-------KPSKRIKNMHRKNWDP-------------VLEPDLVVYNA 319
L E + + RM+ I N K P ++PD V YN
Sbjct: 523 LDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNT 582
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
VL A + ++ + K++ G TY +E+
Sbjct: 583 VLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEA 621
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 91/233 (39%), Gaps = 15/233 (6%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
++R I++AVA ++ R TA Y + L + G ++ + ++ +
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEG 220
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 485
P +T++ LI + G D I + MKD+ +P ++ + + D A
Sbjct: 221 QCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGA 280
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
LFEE +PD +TY+ ++ A + + + M GC
Sbjct: 281 LGLFEEMRHQYC-------------RPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGC 327
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
+ D ++ +AG+ F+ + IP + + +I+A+ +S
Sbjct: 328 RPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNT-IIKALFES 379
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/448 (20%), Positives = 174/448 (38%), Gaps = 65/448 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++KGL G + A+ V G K D+ + L+ L K+GR EA +IF M
Sbjct: 71 VIKGLCKAGRFGDALGYFKTVAGTKCTPDI---ITFNILVDALVKSGRVEEAFQIFESMH 127
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ----------------------- 292
P++ Y +V L + G L ++L++ M +
Sbjct: 128 TSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRT 187
Query: 293 -KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K ++ M R+ + +PD+++YN +LN S + + + + +SG P+ T
Sbjct: 188 DKGFTLLQEMTRRGF----QPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVT 243
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y ME F +++ A ++ M +RG Y + LC + R
Sbjct: 244 YNSLME------------LFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDAR 291
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID------DCISIFQHMKD-HCEP 464
DA +++++ + R P IT++ +I +D I + MK C P
Sbjct: 292 LDDAQALLKQMVAAR-CVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPP 350
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
N GT +++ R +A L + + PD ++S ++ +
Sbjct: 351 NAGTYAVVIEGLCRARKSQQALALLRRMIDSE-------------VVPDLSSFSMVIGSL 397
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
+H + ++ M+ C+ + +A L+ S+ G+ F+ ++E+ P
Sbjct: 398 CKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFR-PGV 456
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAMAY 612
+ +L E+AV ++ M +
Sbjct: 457 ATYNSVLDGLCGVGRIEEAVRMVEGMIH 484
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/340 (18%), Positives = 141/340 (41%), Gaps = 44/340 (12%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+++R + + F Y L+ L KAG+ +A + + M D + P +A ++ V L + G
Sbjct: 21 FREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEM-RDRGIPPGVAVHNGVIKGLCKAG 79
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ + + + PD++ +N +++A V S + + F +F+
Sbjct: 80 RFGDALGYFKTVAGTKCT---------------PDIITFNILVDALVKSGRVEEAFQIFE 124
Query: 339 QLRKSG-LKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
+ S P+ TY ++ ++GK++ A+ + M + G
Sbjct: 125 SMHTSSQCLPNVVTY------------TTVINGLCKDGKLDRAIELLDLMNETGCCPNVI 172
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y L LC GR +++++ + R +P I + L+ +D+ + + Q
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEM-TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQL 231
Query: 458 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
M + C P + T N++++++ R+ +A L + +S G P PD
Sbjct: 232 MIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQ-----------VMSERGCP--PDVIN 278
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
Y++++ + + + + K M + C D ++ ++
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTII 318
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 153/400 (38%), Gaps = 73/400 (18%)
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILG 239
+MN++G L++GL G + ++L + + D+ +Y LL L
Sbjct: 161 LMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV---IMYNTLLNGLC 217
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK--PSKR 297
K+ R EAL + LM+ YP + Y+S+ + + +LI+ M ++ P
Sbjct: 218 KSRRLDEALELVQLMIRS-GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDV 276
Query: 298 IKNMHRKNWDPVLE------------------------PDLVVYNAVLNACVPS----HQ 329
I N++ V+ PD++ Y+ +++
Sbjct: 277 I------NYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDAD 330
Query: 330 WK--GVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
WK + + ++++G P+A TY + +E L RA K +A+A +R M
Sbjct: 331 WKLEAACEILEMMKQTGCPPNAGTYAVVIEG--------LCRAR----KSQQALALLRRM 378
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
VV S + + LC + DA + + S R KP + + LI GG
Sbjct: 379 IDSEVVPDLSSFSMVIGSLCKSHDL-DAAYKIFGMMSERECKPNPVAYAALIDGLSKGGE 437
Query: 448 IDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
+D + +F+ M + P + T N++L +A + E
Sbjct: 438 VDKAVRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECF--------- 488
Query: 508 APLKPDEYTYSSMLEA----SATAHQWEYFEYV-YKGMAL 542
PD +Y +++ S +E F+ V KG A+
Sbjct: 489 ----PDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAM 524
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 31/241 (12%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N LN V + Q +F++ R P+ TYG L+ + GK+
Sbjct: 2 NCALNLLVRAGQHGQAVQLFREER---CVPNEFTYG------------SLIHGLCKAGKL 46
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
++A + M RG+ +V+ + LC GR+ DA+ + + + + P ITF
Sbjct: 47 DQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCT-PDIITFNI 105
Query: 438 LIISSMDGGHIDDCISIFQ--HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
L+ + + G +++ IF+ H C PN+ T ++ ++ +A EL +
Sbjct: 106 LVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLD---LM 162
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
N +G P+ TYS ++E A + + + + M G Q D + L
Sbjct: 163 NETGCC----------PNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212
Query: 556 L 556
L
Sbjct: 213 L 213
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 106/270 (39%), Gaps = 42/270 (15%)
Query: 161 LVDRLSEREMTAKNWKF------VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
++D L + +WK + +M Q+G G +++GL +QA+++L
Sbjct: 317 IIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLR 376
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVT 273
+ + DL S ++ ++ L K+ A +IF +M E +C P+ AY ++
Sbjct: 377 RMIDSEVVPDLSS---FSMVIGSLCKSHDLDAAYKIFGMMSERECK--PNPVAYAALIDG 431
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKG 332
L + G + + V++ E M + P + YN+VL+ C +
Sbjct: 432 LSKGGEVDKAVRVFELMVES----------------FRPGVATYNSVLDGLCGVGRIEEA 475
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
V V + K P A+YG L+R + EA + +E +G
Sbjct: 476 VRMVEGMIHKECF-PDGASYG------------ALIRGLCRVSCVEEAYELFQAVEAKGF 522
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKI 422
VY L LC R DA V K+
Sbjct: 523 AMEVGVYNVLVNELCKKKRLSDAHGVANKL 552
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 141/369 (38%), Gaps = 36/369 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P + YN ++N + +F ++RK GL+P+ ++ L+
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSF------------NTLINGL 268
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ ++E + ME+ + Y L LC GR A + ++++ R +P
Sbjct: 269 CKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ-RGLRPN 327
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
ITFT LI ID ++ + M +P++ N +L + +KA++L +
Sbjct: 328 GITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E +KPD+ TY+++++ E + KGM G LD
Sbjct: 388 EMRMVG-------------MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV 434
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L+ R G+ E ++EAG P +T ++ + N + L+ M
Sbjct: 435 AFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494
Query: 611 ---AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHAL 667
+ P IT + L + LL A+ N +IT + L L
Sbjct: 495 QINGHKPGVIT---YNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNIL---LEGH 548
Query: 668 CRSEKERDL 676
C++ K DL
Sbjct: 549 CKNGKAEDL 557
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 138/350 (39%), Gaps = 53/350 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ +GS R A + + + KR L+ V + L+ L K+ E R+ M
Sbjct: 229 LINKFCKEGSIRDAKLIFNEI----RKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTM 284
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP-----------------SKR 297
E+ +YPD+ Y + L + G L +L + M+Q+ S+R
Sbjct: 285 -EENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRR 343
Query: 298 IK---NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
I N + + ++PDLV+YN +LN + ++R G+KP TY
Sbjct: 344 IDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITY-- 401
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
L+ + +EG + A+ + M + GVV + L C +GR +D
Sbjct: 402 ----------TTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRD 451
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAML 473
A + ++ KP + T+T +I G++ + + M+ + +P + T N ++
Sbjct: 452 AERTLREMVE-AGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLM 510
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+ A L E + PD+ TY+ +LE
Sbjct: 511 NGLCKQGQMKNANMLLEAMLNLG-------------VTPDDITYNILLEG 547
Score = 42.7 bits (99), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 80/200 (40%), Gaps = 19/200 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
L++ L + K K V M G+ + L+ G +G AM + G+
Sbjct: 368 TLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRK---GM 424
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
++ + +T L++ + GR +A R M+E + PD A Y V + G
Sbjct: 425 NEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVE-AGMKPDDATYTMVIDGYCKKGN 483
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+K KL++ M+ N H+ P ++ YN ++N Q K + +
Sbjct: 484 VKMGFKLLKEMQI-------NGHK--------PGVITYNVLMNGLCKQGQMKNANMLLEA 528
Query: 340 LRKSGLKPSAATYGLAMESY 359
+ G+ P TY + +E +
Sbjct: 529 MLNLGVTPDDITYNILLEGH 548
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/492 (18%), Positives = 195/492 (39%), Gaps = 87/492 (17%)
Query: 128 LDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL 186
+D ++ + +F +W ++R + ++ L+ L E M + WK ++ M +S
Sbjct: 100 IDVEIHVKIQFF----KWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTC 155
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRD---------------------- 224
+ + +++K LG +A+S+ + G K K
Sbjct: 156 VIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHE 215
Query: 225 -----------LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
L Y+ L+A GK GR A+ +F+ M E+ L+P Y ++
Sbjct: 216 LYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKEN-GLHPTAKIYTTILGI 274
Query: 274 LGQVGLLKELVKLIERMRQKP--------SKRIKNMHRKN------------WDPVLEPD 313
++G +++ + L++ M++K ++ IK + + +PD
Sbjct: 275 YFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPD 334
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
+V+ N ++N + + +F+++ P+ TY +++A +E
Sbjct: 335 VVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTY------------NTVIKALFE 382
Query: 374 -EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
+ + +EA M++ GVV ++ Y L C R + A+L++E++ + P
Sbjct: 383 SKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDE-KGFAPCP 441
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEE 491
+ LI + + +FQ ++++C + V A M+K + S+A +LF E
Sbjct: 442 AAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNE 501
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
+ + PD Y Y++++ + + + M +GC D
Sbjct: 502 MKKLGCN-------------PDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNS 548
Query: 552 HAWLLVEASRAG 563
H +L +R G
Sbjct: 549 HNIILNGFARTG 560
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 146/360 (40%), Gaps = 68/360 (18%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVA 271
L V +K+K + + YT+L+ +GKAG+ EA IF N++ E C PD+ +++
Sbjct: 285 LGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCK--PDVVLINNLI 342
Query: 272 VTLGQVGLLKELVKLIERMRQ---KPSKRIKNM------------------HRKNWDPVL 310
LG+ G L + +KL E M P+ N + K + +
Sbjct: 343 NLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGV 402
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG----------------- 353
P Y+ +++ +++ + + +++ + G P A Y
Sbjct: 403 VPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANE 462
Query: 354 LAMESYRRC------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
L E C + V+++ + G+++EAV M++ G Y L +
Sbjct: 463 LFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMV 522
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLE---ITFTGLIISSMDGGHIDDCISIFQHMKD-HCE 463
G +A ++ ++ + L I G + G I+ +F MK+ +
Sbjct: 523 RVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIE----MFTRMKNSKIK 578
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
P++ + N +L SR MF +A +L +E NS G+ + D TYSS+LEA
Sbjct: 579 PDVVSYNTVLGCLSRAGMFEEAAKLMKEM---NSKGFEY----------DLITYSSILEA 625
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 94/233 (40%), Gaps = 33/233 (14%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQE---L 467
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVG 278
++ S VY ++ LGK GR EA+ +FN M + CN PD+ AY+++ + +VG
Sbjct: 468 RENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCN--PDVYAYNALMSGMVRVG 525
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ E L+ M + PDL +N +LN + KG +F
Sbjct: 526 MTDEAHSLLRTMEENGCT---------------PDLNSHNIILNGFARTGGPKGAIEMFT 570
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
+++ S +KP +Y +L L RA G EA ++ M +G
Sbjct: 571 RMKNSKIKPDVVSY--------NTVLGCLSRA----GMFEEAAKLMKEMNSKG 611
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 73/197 (37%), Gaps = 15/197 (7%)
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T+ LI + G + + Q M + C ++ ++KV + M +KA +F +
Sbjct: 126 TYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQI 185
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG-CQLDQTK 551
G KP TY+SM+ E +Y M G C D
Sbjct: 186 -------------KGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVT 232
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
++ L+ + G+ FD + E G P +T +L EKA+ L+ M
Sbjct: 233 YSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMK 292
Query: 612 YAPFHITERQWTELFES 628
+T +TEL +
Sbjct: 293 EKGCALTVYTYTELIKG 309
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/382 (19%), Positives = 153/382 (40%), Gaps = 43/382 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+ LL L GR EA+ + + M+ ++ PD+ +++ L + E V LI R
Sbjct: 162 TFNTLLNGLCLEGRVFEAVELVDCMVLSQHV-PDLITLNTIVNGLCLKDRVSEAVDLIAR 220
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +P+ Y +LN S + +++ +KP
Sbjct: 221 MMANGC---------------QPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHV 265
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY +++ ++G++++A++ ME +G+ Y L C+
Sbjct: 266 VTY------------TIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSF 313
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 468
GRW D ++ + + R P +TF+ LI S + G + + ++ M EPN T
Sbjct: 314 GRWDDGAQLLRDMIT-RKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTIT 372
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
N+++ + +A ++ + + G PD +TY+ ++ A
Sbjct: 373 YNSLIYGLCNDKRLDEANQMMD-----------LMVSKGC--DPDIWTYNILINGFCKAK 419
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
Q + +++ M+L G D ++ L+ ++ K + + F ++ G P + +
Sbjct: 420 QVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYA 479
Query: 589 EMLIQAIVQSNYEKAVALINAM 610
+L E+A+ +++ M
Sbjct: 480 ILLDGLCDNGELEEALGILDQM 501
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/492 (18%), Positives = 195/492 (39%), Gaps = 87/492 (17%)
Query: 128 LDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL 186
+D ++ + +F +W ++R + ++ L+ L E M + WK ++ M +S
Sbjct: 100 IDVEIHVKIQFF----KWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTC 155
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRD---------------------- 224
+ + +++K LG +A+S+ + G K K
Sbjct: 156 VIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHE 215
Query: 225 -----------LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
L Y+ L+A GK GR A+ +F+ M E+ L+P Y ++
Sbjct: 216 LYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKEN-GLHPTAKIYTTILGI 274
Query: 274 LGQVGLLKELVKLIERMRQKP--------SKRIKNMHRKN------------WDPVLEPD 313
++G +++ + L++ M++K ++ IK + + +PD
Sbjct: 275 YFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPD 334
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
+V+ N ++N + + +F+++ P+ TY +++A +E
Sbjct: 335 VVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTY------------NTVIKALFE 382
Query: 374 -EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
+ + +EA M++ GVV ++ Y L C R + A+L++E++ + P
Sbjct: 383 SKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDE-KGFAPCP 441
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEE 491
+ LI + + +FQ ++++C + V A M+K + S+A +LF E
Sbjct: 442 AAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNE 501
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
+ + PD Y Y++++ + + + M +GC D
Sbjct: 502 MKKLGCN-------------PDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNS 548
Query: 552 HAWLLVEASRAG 563
H +L +R G
Sbjct: 549 HNIILNGFARTG 560
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 146/360 (40%), Gaps = 68/360 (18%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVA 271
L V +K+K + + YT+L+ +GKAG+ EA IF N++ E C PD+ +++
Sbjct: 285 LGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCK--PDVVLINNLI 342
Query: 272 VTLGQVGLLKELVKLIERMRQ---KPSKRIKNM------------------HRKNWDPVL 310
LG+ G L + +KL E M P+ N + K + +
Sbjct: 343 NLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGV 402
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG----------------- 353
P Y+ +++ +++ + + +++ + G P A Y
Sbjct: 403 VPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANE 462
Query: 354 LAMESYRRC------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
L E C + V+++ + G+++EAV M++ G Y L +
Sbjct: 463 LFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMV 522
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLE---ITFTGLIISSMDGGHIDDCISIFQHMKD-HCE 463
G +A ++ ++ + L I G + G I+ +F MK+ +
Sbjct: 523 RVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIE----MFTRMKNSKIK 578
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
P++ + N +L SR MF +A +L +E NS G+ + D TYSS+LEA
Sbjct: 579 PDVVSYNTVLGCLSRAGMFEEAAKLMKEM---NSKGFEY----------DLITYSSILEA 625
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 94/233 (40%), Gaps = 33/233 (14%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQE---L 467
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVG 278
++ S VY ++ LGK GR EA+ +FN M + CN PD+ AY+++ + +VG
Sbjct: 468 RENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCN--PDVYAYNALMSGMVRVG 525
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ E L+ M + PDL +N +LN + KG +F
Sbjct: 526 MTDEAHSLLRTMEENGCT---------------PDLNSHNIILNGFARTGGPKGAIEMFT 570
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
+++ S +KP +Y +L L RA G EA ++ M +G
Sbjct: 571 RMKNSKIKPDVVSY--------NTVLGCLSRA----GMFEEAAKLMKEMNSKG 611
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 73/197 (37%), Gaps = 15/197 (7%)
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T+ LI + G + + Q M + C ++ ++KV + M +KA +F +
Sbjct: 126 TYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQI 185
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG-CQLDQTK 551
G KP TY+SM+ E +Y M G C D
Sbjct: 186 -------------KGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVT 232
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
++ L+ + G+ FD + E G P +T +L EKA+ L+ M
Sbjct: 233 YSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMK 292
Query: 612 YAPFHITERQWTELFES 628
+T +TEL +
Sbjct: 293 EKGCALTVYTYTELIKG 309
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 44/244 (18%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
DKR + Y ++A L KA +A+ + M++ + PD Y+S+ G
Sbjct: 40 DKRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS-GVMPDCMTYNSIVHGFCSSGQP 98
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
KE + +++MR +EPD+V YN++++ + + +F +
Sbjct: 99 KEAIVFLKKMRSDG---------------VEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 143
Query: 341 RKSGLKPSAATYGLAMESY-----------------------RRCLLKVLVRAFWEEGKI 377
K GLKP TYG ++ Y + +LV A+ ++ K+
Sbjct: 144 TKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKV 203
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI--KSLRHSKPLEITF 435
EA+ M Q+G+ A Y + LC +GR +DAML E++ + LR P I +
Sbjct: 204 EEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLR---PDSIVY 260
Query: 436 TGLI 439
LI
Sbjct: 261 NSLI 264
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/293 (17%), Positives = 118/293 (40%), Gaps = 27/293 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+V Y+ V+N + + ++ + P+ TY ++ A
Sbjct: 10 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTY------------NSIIAAL 57
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ +++A+ + M + GV+ Y + C++G+ ++A++ ++K++S +P
Sbjct: 58 CKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRS-DGVEPD 116
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+T+ L+ G + IF M K +P+I T +L+ Y+ + L +
Sbjct: 117 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLD 176
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
R + P+ Y +S ++ A A + E V+ M G +
Sbjct: 177 LMVRNG-------------IHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAV 223
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
+ ++ ++G+ F+ +++ G P + + ++ + +EKA
Sbjct: 224 TYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKA 276
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 118/311 (37%), Gaps = 27/311 (8%)
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
+ + D + P++V YN+++ A + V + KSG+ P TY
Sbjct: 35 YNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTY--------- 85
Query: 362 CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
+V F G+ EA+ ++ M GV Y L LC NGR +A + +
Sbjct: 86 ---NSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDS 142
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRND 480
+ R KP T+ L+ G + + + M ++ PN + ++ Y++ +
Sbjct: 143 MTK-RGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 201
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
+A +F + + L P+ TY ++++ + + E ++ M
Sbjct: 202 KVEEAMLVFSKMRQQG-------------LNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 248
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 600
G + D + L+ K E F +L+ G +FF ++ +
Sbjct: 249 IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRV 308
Query: 601 EKAVALINAMA 611
++V L + M
Sbjct: 309 IESVKLFDLMV 319
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 98/234 (41%), Gaps = 35/234 (14%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--G 218
L+D L + + K M + GL LL+G KG+ + +LD + G
Sbjct: 123 LMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNG 182
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ + +V++ L+ K + EA+ +F+ M + L P+ Y +V L + G
Sbjct: 183 IH-----PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ-GLNPNAVTYGTVIDVLCKSG 236
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+++ + E+M D L PD +VYN+++++ +W+ +F
Sbjct: 237 RVEDAMLYFEQM---------------IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFL 281
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
++ G+ S + ++S+ +EG++ E+V M + GV
Sbjct: 282 EMLDRGICLSTIFFNSIIDSH------------CKEGRVIESVKLFDLMVRIGV 323
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 158/373 (42%), Gaps = 46/373 (12%)
Query: 185 GLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
G F + L+ GL G R A+ +L V G + ++ +Y ++ + K
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV---VMYNTIIDSMCKVKLV 241
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
+EA +F+ M+ + PD+ Y ++ +G L + + L +M ++N
Sbjct: 242 NEAFDLFSEMISK-GISPDVVTYSALISGFCILGKLNDAIDLFNKMI------LEN---- 290
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL 364
++PD+ +N ++NA + K VF + K G+KP+ TY M+ Y CL+
Sbjct: 291 -----IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY--CLV 343
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
K ++N+A + M Q GV Y + C ++ +AM + +++
Sbjct: 344 K----------EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHR 393
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 483
++ P +T++ LI G I + + M D P I T N++L +
Sbjct: 394 -KNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVD 452
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
KA L T+ G ++P+ YTYS +++ + + E V++G+ +
Sbjct: 453 KAIALL---TKLKDKG----------IQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVK 499
Query: 544 GCQLDQTKHAWLL 556
G L+ + ++
Sbjct: 500 GHNLNVDTYTIMI 512
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/350 (19%), Positives = 134/350 (38%), Gaps = 42/350 (12%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
+ +Y S + T + + V L R+ + R P E +N +L
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRL----------LRRNTTPPAFE-----FNKILG 93
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA 382
+ V S + V ++ +++ G+KP+ +L+ F + G I A +
Sbjct: 94 SLVKSKHYHTVLYLSQKMEFRGIKPNLVN------------CNILINCFCQLGLIPFAFS 141
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 442
+ + G V + L LC G+ Q A L +K+ +L +I++ LI
Sbjct: 142 VFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFD-QISYGTLIHGL 200
Query: 443 MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
G + + Q + + +PN+ N ++ + + ++A +LF E S G
Sbjct: 201 CKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMI---SKG-- 255
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
+ PD TYS+++ + ++ M L + D L+ +
Sbjct: 256 --------ISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCK 307
Query: 562 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
GK + FD +++ G P+ + + ++ + KA ++ N MA
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/299 (19%), Positives = 118/299 (39%), Gaps = 27/299 (9%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
D + Y +++ + + + +++ + ++P+ Y ++S C +K+
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS--MCKVKL------ 240
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
+NEA M +G+ Y L C G+ DA+ + K+ L + KP
Sbjct: 241 ----VNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM-ILENIKPDV 295
Query: 433 ITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
TF L+ + G + + ++F MK +PN T N+++ Y +KAK +F
Sbjct: 296 YTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNT 355
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
+ + PD +YS M+ +++ ++K M D
Sbjct: 356 MAQGG-------------VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
++ L+ S++G+ D + + G P + +L +KA+AL+ +
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKL 461
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 28/169 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L+ L K+GR AL++ + M D + P I Y+S+ L ++ + + + L+ ++
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQM-HDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKL 461
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ K ++P++ Y+ ++ S + + VF+ L G +
Sbjct: 462 KDKG---------------IQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVD 506
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
TY ++++ F EG NEA+A + ME G + A Y
Sbjct: 507 TY------------TIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 156/405 (38%), Gaps = 54/405 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL+ + G EA +F M E + PDI Y + T G++ L+++ +L++
Sbjct: 254 TYNTLLSACARRGLGDEAEMVFRTMNEG-GILPDITTYSYLVETFGKLNRLEKVSELLKE 312
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M S PD+ YN +L A S K VF+Q++ +G P+A
Sbjct: 313 MESGGSF---------------PDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNA 357
Query: 350 ATYGLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRN 386
ATY + + Y R +L+ F E G E V +
Sbjct: 358 ATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHD 417
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
M + V Y L G +DA ++ + + P +TG+I +
Sbjct: 418 MVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNE-KGVVPSSKAYTGVIEAYGQAA 476
Query: 447 HIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
++ + F M + +P + T N++++++++ ++ +++ + + SG
Sbjct: 477 LYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAIL---LKMGQSG------ 527
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
+ + T++ ++EA Q+E Y M + C D+ +L AG
Sbjct: 528 ----VARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLV 583
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
E F + G +P + + ML ++ A L++ M
Sbjct: 584 EESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEM 628
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 153/398 (38%), Gaps = 82/398 (20%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ GS ++AM V + G + + Y+ LL + G+ GR ++ +R L +
Sbjct: 328 LLEAHAQSGSIKEAMGVFRQMQG---AGCVPNAATYSILLNLYGRHGR-YDDVRDLFLEM 383
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N P+ A Y+ + G+ G KE+V L M ++ +EP++
Sbjct: 384 KVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEEN---------------VEPNME 428
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y ++ AC + + + + G+ PS+ Y +E+Y + A +EE
Sbjct: 429 TYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQA-------ALYEE- 480
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
A+ A M + G T Y L G ++++ ++ K+ ++ + TF
Sbjct: 481 ----ALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRD-TF 535
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
G+I + GG ++ I + M K C+P+ T+ A+L VY + +++E F E
Sbjct: 536 NGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEI-- 593
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA---------------------HQ---- 529
+ P Y ML A A HQ
Sbjct: 594 -----------KALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQ 642
Query: 530 -----------WEYFEYVYKGMALSGCQLDQTKHAWLL 556
W+ EYV++ + GC L + LL
Sbjct: 643 MIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLL 680
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 156/393 (39%), Gaps = 62/393 (15%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
+LR+F M P+ Y + LG+ GLL++ ++ + M PS +
Sbjct: 129 SLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEM---PSHGVA------- 178
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL-- 364
P + + A++NA + Q+K + +++K + PS TY + S R L
Sbjct: 179 -----PSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDW 233
Query: 365 ----------------------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
L+ A G +EA R M + G++ + Y L
Sbjct: 234 EELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYL 293
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-H 461
R + ++++++S S P ++ L+ + G I + + +F+ M+
Sbjct: 294 VETFGKLNRLEKVSELLKEMES-GGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAG 352
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
C PN T + +L +Y R+ + ++LF E +N+ +P+ TY+ ++
Sbjct: 353 CVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNT-------------EPNAATYNILI 399
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL---EA 578
++ ++ M + + + L+ + G L E A LL E
Sbjct: 400 NVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGG---LHEDAKKILLHMNEK 456
Query: 579 GEIPHPLFFTEMLIQAIVQSN-YEKAVALINAM 610
G +P +T +I+A Q+ YE+A+ N M
Sbjct: 457 GVVPSSKAYTG-VIEAYGQAALYEEALVAFNTM 488
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 172/442 (38%), Gaps = 56/442 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
++ LL LG+AG +F M D ++ PD+ Y + L + G + + +K+++R
Sbjct: 133 IFNSLLTALGRAGNLRGMTELFTSM-RDASVKPDVVTYGILLNGLCKSGHVGDALKVLDR 191
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRK-SGLKP 347
M S + PD+ + N V++ C + + +V +++R G P
Sbjct: 192 MSSPGSD-------------VCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAP 238
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+A TY L AF G I A V ME+ GV + LC
Sbjct: 239 NAVTY------------NCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLC 286
Query: 408 NNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PN 465
GR A+ EK ++ +T++ L + + ++D + +F M DH P+
Sbjct: 287 RVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPD 346
Query: 466 IGTVNAMLKVYSRN----DMFSKAKELFEETTRANSSGYTFLSGD--------------- 506
M+ ++ D + A + + + ++ Y L G
Sbjct: 347 AVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLE 406
Query: 507 ---GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
G L+PD YTY+++L A + + + M GCQ L+ +AG
Sbjct: 407 EMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAG 466
Query: 564 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM--AYAPFHITERQ 621
K F S+ EA P+ + + ++ + A+ L + M P ++T
Sbjct: 467 KTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVT--T 524
Query: 622 WTELFESNEDRISRDKLEKLLN 643
+ L + +D+ +K +L++
Sbjct: 525 YNALLKGLQDKKMAEKAFELMD 546
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 110/283 (38%), Gaps = 40/283 (14%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+ ++N++L A + +G+ +F +R + +KP TYG +L+
Sbjct: 129 PDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYG------------ILLNGL 176
Query: 372 WEEGKINEAVAAVRNMEQRG--VVGTASVYYELACCLCNNGRWQDAMLVV-EKIKSLRHS 428
+ G + +A+ + M G V ++ + LC GR Q A++ V E+++ +
Sbjct: 177 CKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGC 236
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
P +T+ L + G I I M K+ PN+ T+N ++ R A E
Sbjct: 237 APNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALE 296
Query: 488 LFEET------TRANSSGYT-----FLSGDGAPL-------------KPDEYTYSSMLEA 523
F E R N+ Y+ FL + + +PD Y +M+
Sbjct: 297 FFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISG 356
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
A + M +G +LD + L+ R K H
Sbjct: 357 LTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLH 399
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/434 (20%), Positives = 170/434 (39%), Gaps = 51/434 (11%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY-- 217
VL+ + MT K ++ R M GL+ + ++ +LKGL + W+ A+ + + +
Sbjct: 337 VLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADS 396
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
GL D F Y L+ +A + EAL +F+ M + + P I Y+S+ + +
Sbjct: 397 GLPDV------FTYNNLIHWHCQAHKLREALNLFDRM-KKAGVKPSINTYNSLLMGYCKK 449
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G + E VKL M P + K P++V Y ++ + + + +
Sbjct: 450 GCMDEAVKLYSEM---PMEGFK------------PNVVTYITLMRGYIAKKDFDNAYALL 494
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
+++++G+ + TY VL+ ++ E +++ G + T
Sbjct: 495 DEMKQNGVSCNDYTY------------NVLINGICMVDRVCEVDGMLKSFMSEGFIPTMM 542
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y + G A V ++++ + P IT+T I G D + +
Sbjct: 543 TYNSIINGFVKAGMMGSAFTVYQQMRE-KGLPPNIITYTSFIDGYCRTGCSDMALKMLND 601
Query: 458 MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
++ +P+I NA++ + + S A +L L DG L P+
Sbjct: 602 VRRRGLQPDIVAYNALINGFCQEGNMSHALQLL-----------VILLKDG--LAPNTVV 648
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
Y+S++ + + Y+ M G D + + L+ S+ G + ++
Sbjct: 649 YNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMM 708
Query: 577 EAGEIPHPLFFTEM 590
G IP FT +
Sbjct: 709 AKGYIPDAFTFTAL 722
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 110/298 (36%), Gaps = 43/298 (14%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ + Y ++ KAG A ++ M E L P+I Y S + G +
Sbjct: 538 IPTMMTYNSIINGFVKAGMMGSAFTVYQQMREK-GLPPNIITYTSFIDGYCRTGCSDMAL 596
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
K++ +R++ L+PD+V YNA++N + L K G
Sbjct: 597 KMLNDVRRRG---------------LQPDIVAYNALINGFCQEGNMSHALQLLVILLKDG 641
Query: 345 LKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
L P+ Y + Y+ + V F+E +M + G+V S Y L
Sbjct: 642 LAPNTVVYNSLITGYKNLNMMKEVSKFYE------------SMIKGGIVADTSTYTTLID 689
Query: 405 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCE 463
+G A+ + ++ + + P TFT L G ID + + M+
Sbjct: 690 GFSKDGNVAFALELYSEMMA-KGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVR 748
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
PN+ N ++ Y R+ +A L +E ++PD+ TY ++
Sbjct: 749 PNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMG-------------IQPDDTTYDILV 793
Score = 39.7 bits (91), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 63/355 (17%), Positives = 142/355 (40%), Gaps = 42/355 (11%)
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+++A+++AC+ + +F ++ + + P Y LA + A + G
Sbjct: 194 MFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALA------------ITALCKLG 241
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
A+ +R M++ G Y + L GR ++A+ V ++++ K +++
Sbjct: 242 DGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRD--AGKKMDV-- 297
Query: 436 TGLIISSMDGGH-----IDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
++ +++ G+ + + +++F+ +KD P +++ + M KA EL
Sbjct: 298 --IVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELC 355
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
+ T G L P + S +L+ +W+ +++ MA SG D
Sbjct: 356 RQMT-------------GQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLP-DV 401
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
+ L+ +A K + FD + +AG P + +L+ + ++AV L +
Sbjct: 402 FTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSE 461
Query: 610 MAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL----CNCNAASSEITVSNL 660
M F + L + D LL+ + +CN + + ++ +
Sbjct: 462 MPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGI 516
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/431 (20%), Positives = 178/431 (41%), Gaps = 59/431 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL GL G +AM++ + D+R + L+ L +AG+ AL F M
Sbjct: 51 LLDGLFRTGKLERAMALFQEML---DRRS-HDVISFNILVTGLCRAGKIETALEFFRKMD 106
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ C+ P++ Y + L + + + V+L+E M+ + PD++
Sbjct: 107 DRCS--PNVITYSVLIDGLCKANRVSQAVELLESMKARGCS---------------PDVI 149
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y +++ + + V +++ +G P+ TY L+
Sbjct: 150 TYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTY------------NSLLHGLCRAR 197
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
++++A+A +R+M RG Y L LC GR +DA ++ + + P + +
Sbjct: 198 RVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMID-KGGTPDLMIY 256
Query: 436 TGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
LI +D+ I++ + + +P++ T ++++ R++ +A L
Sbjct: 257 NMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLL----- 311
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
++ G P PD YS++++ A + + +Y+ M GC D ++
Sbjct: 312 ------LYVKSRGCP--PDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYST 363
Query: 555 L---LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAM 610
L L +A R + HLL ++ G P + + LI+ + N+ ++A+ L+ M
Sbjct: 364 LIDGLCKAGRVDEAHLL---LARMVRMGTPPSTMTYNS-LIKGLCDLNHLDEAIELVEEM 419
Query: 611 A---YAPFHIT 618
AP +T
Sbjct: 420 ERSNCAPSAVT 430
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 144/372 (38%), Gaps = 59/372 (15%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+LVD L + A W+ +R M +G + LL GL A++++
Sbjct: 153 ILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALM------ 206
Query: 220 KDKRDLKSR------FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
RD+ R Y L+ L K GR +A + M++ PD+ Y+ +
Sbjct: 207 ---RDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDK-GGTPDLMIYNMLING 262
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
L + + E + L +R+ S IK PD+V Y++V+ S++
Sbjct: 263 LCKADQVDESIAL---LRRAVSGGIK------------PDVVTYSSVIYGLCRSNRLDEA 307
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
+ ++ G P Y L+ + GK++EA M G
Sbjct: 308 CRLLLYVKSRGCPPDVILY------------STLIDGLCKAGKVDEAFDLYEVMTGDGCD 355
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
Y L LC GR +A L++ ++ + + P +T+ LI D H+D+ I
Sbjct: 356 ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM-GTPPSTMTYNSLIKGLCDLNHLDEAIE 414
Query: 454 IFQHM-KDHCEPNIGTVNAMLKVYSRNDMF-SKAKELFEETTRANSSGYTFLSGDGAPLK 511
+ + M + +C P+ T N ++ R + S A + F+E +
Sbjct: 415 LVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNG-------------VI 461
Query: 512 PDEYTYSSMLEA 523
PD TYS +LE
Sbjct: 462 PDHITYSILLEG 473
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/321 (19%), Positives = 116/321 (36%), Gaps = 75/321 (23%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
EP++V YN++++ +++ +F+ ++ PS TY L+
Sbjct: 7 EPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTY------------NTLLDG 54
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ GK+ A+A + M R R D
Sbjct: 55 LFRTGKLERAMALFQEMLDR--------------------RSHDV--------------- 79
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
I+F L+ G I+ + F+ M D C PN+ T + ++ + + S+A EL E
Sbjct: 80 --ISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLE 137
Query: 491 ETTRANSS----GYTFLSGDG-------------------APLKPDEYTYSSMLEASATA 527
S YT L DG A P+ TY+S+L A
Sbjct: 138 SMKARGCSPDVITYTILV-DGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRA 196
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
+ + + M GC + + L+ + G+ +++ G P + +
Sbjct: 197 RRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIY 256
Query: 588 TEMLIQAIVQSN-YEKAVALI 607
MLI + +++ ++++AL+
Sbjct: 257 -NMLINGLCKADQVDESIALL 276
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/476 (20%), Positives = 188/476 (39%), Gaps = 81/476 (17%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG-LKDKRDLKSRFVYTKLLAILG 239
+ GL+ TE L+K G+ G + + WV+ +K+ S + Y L+ L
Sbjct: 174 LKDRGLLMTESAANSLIKSFGNLGLVEELL----WVWRRMKENGIDPSLYTYNFLVNGLV 229
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
+ A ++F +M + + PD Y+ + + G L QK ++ +
Sbjct: 230 NSMFIESAEKVFEVM-DGGKIVPDTVTYNIMIKGYCKAGKL-----------QKAMEKFR 277
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+M KN ++PD + Y ++ AC + ++ ++ + GL+ +Y L
Sbjct: 278 DMEMKN----VKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSL----- 328
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
++ ++ K EA A M Q+G ++Y L NG ++AM +
Sbjct: 329 -------VIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLF 381
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKV---- 475
E++K+ +P +T++ L+ G +DD + +F D C +NAM
Sbjct: 382 ERMKN-EGFEPDAVTYSVLVNGLCKSGRLDDGMELF----DFCRNKGVAINAMFYASLID 436
Query: 476 -YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
+ A+ LFEE + + D Y Y+++++A A + +
Sbjct: 437 GLGKAGRIEDAENLFEEMSEKGCA-------------RDSYCYNAIIDALAKHGKIDQAL 483
Query: 535 YVYKGMALSGCQLDQTKHAW-LLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEM 590
++ M GC DQT + + +L++ K H E A D +++ G P F +
Sbjct: 484 ALFGRMEEEGC--DQTVYTFTILIDG--LFKEHKNEEAIKFWDKMIDKGITPTVASFRAL 539
Query: 591 LIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALC 646
I + +A +++ + AP I I E ++N LC
Sbjct: 540 AIGLCLCGKVARACKILDDL--APMGI---------------IPETAFEDMINTLC 578
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 172/433 (39%), Gaps = 51/433 (11%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
KLL + + +S+ + + L+ DL S Y L+ + + AL + M
Sbjct: 85 KLLSAIAKMNKFDLVISLGERMQNLRISYDLYS---YNILINCFCRRSQLPLALAVLGKM 141
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM---RQKPSKRIKN-------MHRK 304
++ PDI S+ + E V L+++M +P+ N +H K
Sbjct: 142 MK-LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNK 200
Query: 305 NWDPV----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ V +PDL Y V+N + K++ K ++ Y
Sbjct: 201 ASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY-- 258
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
++ A +N+A+ M+ +G+ Y L CLCN GRW D
Sbjct: 259 ----------TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 473
A ++ + R P +TF+ LI + + G + + ++ M K +P+I T ++++
Sbjct: 309 ASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
+ +D +AK +FE +S D P+ TY+++++ A + E
Sbjct: 368 NGFCMHDRLDEAKHMFE----------LMISKDCF---PNVVTYNTLIKGFCKAKRVEEG 414
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 593
+++ M+ G + + L+ +AG C + + F ++ G P + ++ +L
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 594 AIVQSNYEKAVAL 606
EKA+ +
Sbjct: 475 LCKYGKLEKALVV 487
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 160/398 (40%), Gaps = 49/398 (12%)
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
+FT G ++ GL +G A+S+L + K + D+ +YT ++ L ++
Sbjct: 220 LFTYGT---VVNGLCKRGDIDLALSLLKKMEKGKIEADV---VIYTTIIDALCNYKNVND 273
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
AL +F M ++ + P++ Y+S+ L G + +L+ M + RK
Sbjct: 274 ALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM----------IERK-- 320
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
+ P++V ++A+++A V + ++ ++ K + P TY
Sbjct: 321 ---INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY------------SS 365
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L+ F +++EA M + Y L C R ++ M + ++ S R
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM-SQR 424
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
+T+ LI G D IF+ M D P+I T + +L + KA
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+FE ++ ++PD YTY+ M+E A + E ++ ++L G
Sbjct: 485 LVVFEYLQKSK-------------MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
+ + + ++ R G + F + E G +P+
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 156/405 (38%), Gaps = 54/405 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL+ + G EA +F M E + PDI Y + T G++ L+++ +L++
Sbjct: 12 TYNTLLSACARRGLGDEAEMVFRTMNEG-GILPDITTYSYLVETFGKLNRLEKVSELLKE 70
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M S PD+ YN +L A S K VF+Q++ +G P+A
Sbjct: 71 MESGGSF---------------PDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNA 115
Query: 350 ATYGLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRN 386
ATY + + Y R +L+ F E G E V +
Sbjct: 116 ATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHD 175
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
M + V Y L G +DA ++ + + P +TG+I +
Sbjct: 176 MVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNE-KGVVPSSKAYTGVIEAYGQAA 234
Query: 447 HIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
++ + F M + +P + T N++++++++ ++ +++ + + SG
Sbjct: 235 LYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAIL---LKMGQSG------ 285
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
+ + T++ ++EA Q+E Y M + C D+ +L AG
Sbjct: 286 ----VARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLV 341
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
E F + G +P + + ML ++ A L++ M
Sbjct: 342 EESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEM 386
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 150/389 (38%), Gaps = 82/389 (21%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ GS ++AM V + G + + Y+ LL + G+ GR ++ +R L +
Sbjct: 86 LLEAHAQSGSIKEAMGVFRQMQG---AGCVPNAATYSILLNLYGRHGR-YDDVRDLFLEM 141
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N P+ A Y+ + G+ G KE+V L M ++ +EP++
Sbjct: 142 KVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEEN---------------VEPNME 186
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y ++ AC + + + + G+ PS+ Y +E+Y + A +EE
Sbjct: 187 TYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQA-------ALYEE- 238
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
A+ A M + G T Y L G ++++ ++ K+ ++ + TF
Sbjct: 239 ----ALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRD-TF 293
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
G+I + GG ++ I + M K C+P+ T+ A+L VY + +++E F E
Sbjct: 294 NGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEI-- 351
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA---------------------HQ---- 529
+ P Y ML A A HQ
Sbjct: 352 -----------KALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQ 400
Query: 530 -----------WEYFEYVYKGMALSGCQL 547
W+ EYV++ + GC L
Sbjct: 401 MIRGDYDDDSNWQMVEYVFEKLKSEGCSL 429
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 127/300 (42%), Gaps = 48/300 (16%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC------- 362
++ D+V YN +L+AC VF+ + + G+ P TY +E++ +
Sbjct: 6 IQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVS 65
Query: 363 -LLK---------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
LLK VL+ A + G I EA+ R M+ G V A+ Y L
Sbjct: 66 ELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLY 125
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 465
+GR+ D + ++K + +++P T+ LI +GG+ + +++F M +++ EPN
Sbjct: 126 GRHGRYDDVRDLFLEMK-VSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPN 184
Query: 466 IGTVNAMLKVYSRNDMFSKAKELF----EETTRANSSGYT------------------FL 503
+ T ++ + + AK++ E+ +S YT F
Sbjct: 185 METYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFN 244
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
+ + KP TY+S+++ A ++ E + M SG ++ ++EA R G
Sbjct: 245 TMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNG-VIEAFRQG 303
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 173/457 (37%), Gaps = 113/457 (24%)
Query: 197 LKGLGDKGSWRQAMSVLDWV-----YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
+K L +G+ RQA+ V ++ Y LK+ + +++ILG+ G+ A IF
Sbjct: 1 MKELEIRGARRQALQVFRFLQEHLEYELKEHNCVT-------IISILGREGKLGLAREIF 53
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP---------------SK 296
M + P + AY ++ + GLLKE L E M++K +K
Sbjct: 54 EGM-SKAGVAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTK 112
Query: 297 R------IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R + + + ++P+ + YN ++NACV + + K+++ P+
Sbjct: 113 RAYRLPDLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVI 172
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+Y ++ + G+++EAV M++ G + Y L G
Sbjct: 173 SY------------TTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREG 220
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
R++ AM +F M+D C P++ T
Sbjct: 221 RYEKAM------------------------------------CLFVGMEDEGCIPDLYTY 244
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
N ++ + R +F++A+ +F E R + PD TY++ML+A + +
Sbjct: 245 NTVIDMCGRGGLFAEAEGVFLEMQRKGCT-------------PDRVTYNTMLDAYSKWSR 291
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
+ K M +GC D + LL A +AG F L AG P+ + F+
Sbjct: 292 RGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFS- 350
Query: 590 MLIQAIVQSNYEKAVALINAMA-YAPFHITERQWTEL 625
ALIN F ER W E+
Sbjct: 351 ---------------ALINMYGRLGYFEEAERAWVEM 372
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 99/245 (40%), Gaps = 34/245 (13%)
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKNW--------- 306
N P++ +Y ++ +LG+ G L E V+L E M++ P+ N K +
Sbjct: 166 NCLPNVISYTTMINSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKA 225
Query: 307 --------DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
D PDL YN V++ C + VF ++++ G P TY +++
Sbjct: 226 MCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDA 285
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
Y + W + A ++ M++ G Y L G +AM +
Sbjct: 286 YSK----------WS--RRGRARDLLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQI 333
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYS 477
++K+ HS P ++F+ LI G+ ++ + M+ C PN ++ YS
Sbjct: 334 FHELKAAGHS-PNLVSFSALINMYGRLGYFEEAERAWVEMRATGCVPNATAYCGLMNSYS 392
Query: 478 RNDMF 482
+ M+
Sbjct: 393 HHGMY 397
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 113/560 (20%), Positives = 215/560 (38%), Gaps = 90/560 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+LK L D G A+++ + + +R Y L+ L K G +AL++F+ ML
Sbjct: 178 ILKALVDSGVILLALALYNRMVAAGCA---PNRATYNVLMDGLCKQGMAGDALKMFDEML 234
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D + P++ Y + +L G + E V+L+ M+ K PD V
Sbjct: 235 -DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCL---------------PDEV 278
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES------------YRRCL 363
YNA L+ + F L+ G Y ++ Y + +
Sbjct: 279 TYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTM 338
Query: 364 LK-----------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
L+ +++R E G+I +A++ + M+++G V Y + LC++G
Sbjct: 339 LERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDL 398
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTVN 470
+ A + ++ L+++ L+ T ++I + G +D+ + IF M +H C+P + T N
Sbjct: 399 ERAHTLRSEM--LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYN 456
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTF---------------------LSGDGAP 509
A++ + R +A+ LF + N+ + G
Sbjct: 457 ALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQV 516
Query: 510 LK--------------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
LK PD TY++++ A + ++K + L G D+ + L
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
+ RA + + F ++L++G P + M+ +A+ L + Y P
Sbjct: 577 IDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL--WLDYLPK 634
Query: 616 HITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 675
+E+ + I L+ + L + I+ + + L LC+ + D
Sbjct: 635 KYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDD 694
Query: 676 LSSSAH----FGSQAIDISP 691
H FG IDI+P
Sbjct: 695 ALRIFHTLQEFG---IDITP 711
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 152/434 (35%), Gaps = 94/434 (21%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D L ++ M K M G+M LL L + G +A+ +L +
Sbjct: 212 VLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLG---SM 268
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
KDK L Y L+ L K GR +EA + +ML+D + Y + L Q
Sbjct: 269 KDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRL-VMLQDGGFALGLKGYSCLIDGLFQA-- 325
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
R + K M +N + PD+V+Y ++ C + + +
Sbjct: 326 ---------RRFDEGFGYYKTMLERN----ISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
++K G P Y +LKVL + G + A M Q +V ++
Sbjct: 373 MKKKGFVPDTFCYNT--------VLKVLC----DHGDLERAHTLRSEMLQNNLVLDSTTQ 420
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
+ C LC G +AM + +++ P +T+ LI G +++ +F M+
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGE-HGCDPTVMTYNALIDGFYREGRLEEARMLFHKME 479
Query: 460 -----------------------------DHCE--------------------PNIGTVN 470
D C+ P++ T N
Sbjct: 480 MGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYN 539
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
++ + A LF+E L G + PDE TY ++++ AH+
Sbjct: 540 TLINGLCKARNLDGAVRLFKELQ---------LKG----ISPDEITYGTLIDGLLRAHRE 586
Query: 531 EYFEYVYKGMALSG 544
+++ + SG
Sbjct: 587 NDAMMLFQNILQSG 600
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 28/241 (11%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAIL 238
M Q+ L+ ++ GL +G +AM + D + +G + Y L+
Sbjct: 408 MLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCD-----PTVMTYNALIDGF 462
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG--QVGLLKELVKLIERMRQKPSK 296
+ GR EA +F+ M N P + + +TLG QV + L KL+ M Q
Sbjct: 463 YREGRLEEARMLFHKMEMGNN--PSLF----LRLTLGANQVCDSESLRKLVHDMCQSGQV 516
Query: 297 -RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ + R D + PD+V YN ++N + G +FK+L+ G+ P TYG
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT- 575
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+ L+RA E N+A+ +N+ Q G + S+Y + LC + A
Sbjct: 576 -------LIDGLLRAHRE----NDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQA 624
Query: 416 M 416
+
Sbjct: 625 I 625
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 29/222 (13%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P VYN +L A V S ++ ++ +G P+ ATY VL+
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATY------------NVLMDGL 217
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
++G +A+ M RG++ +Y L LCN G+ +A+ ++ +K + P
Sbjct: 218 CKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKD-KGCLPD 276
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
E+T+ + G +++ ++D G LK YS LF+
Sbjct: 277 EVTYNAFLSGLCKVGRVNEAFQRLVMLQD------GGFALGLKGYS-----CLIDGLFQA 325
Query: 492 TTRANSSGY--TFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
GY T L + + PD Y+ M+ A A + E
Sbjct: 326 RRFDEGFGYYKTMLERN---ISPDVVLYTIMIRGCAEAGRIE 364
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 186/462 (40%), Gaps = 65/462 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLK L G W A++++ WV D + + + LA G+ H+A + +L+
Sbjct: 120 LLKALELSGHWEWALALVRWVRAEGGAADAAALEMVVRTLAREGQ----HDA--VCDLLD 173
Query: 256 EDCNLYP-----DIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM------ 301
E L P D+ AY +V L G + ++L ++++ P+ + N+
Sbjct: 174 EMLPLPPGSPGLDVRAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYG 233
Query: 302 -HRKNWDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
++W + +EPD + V+ AC F+ L+ G P
Sbjct: 234 RMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCV 293
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L++ F + G EA+ ++ ME+ G A Y ELA
Sbjct: 294 VTY------------NALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARA 341
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
G +++A ++ + S + P T+ ++ + + G +D+ +++F M K+ P + T
Sbjct: 342 GFYEEAAKCLDTMVS-KGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNT 400
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
N +L + + F+ E+ E +R+ + P+ T+++ML
Sbjct: 401 YNLILGMLGKKSRFNVMLEMLGEMSRSGCT-------------PNRVTWNTMLAVCGKRG 447
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPL 585
Y V + M G +L + L+ S G+C +AF D + AG P
Sbjct: 448 MEGYVTRVLERMKSCGVELCRDTFNTLI---SAYGRCGSRANAFKMYDEMTAAGFTPCLT 504
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 627
+ +L Q ++ A ++IN M F + ++ L +
Sbjct: 505 TYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQ 546
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 143/394 (36%), Gaps = 101/394 (25%)
Query: 224 DLKSR------FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
DLKSR Y LL + GKAG EALR+ M E+ PD Y+ +A + +
Sbjct: 283 DLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEM-EESGCKPDAVTYNELAGSYARA 341
Query: 278 GLLKELVKLIERMRQK---PSKRIKNMHRKNW------DPVLE-----------PDLVVY 317
G +E K ++ M K P+ N + D L P + Y
Sbjct: 342 GFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTY 401
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL--------AMESY--------RR 361
N +L ++ + + ++ +SG P+ T+ ME Y +
Sbjct: 402 NLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKS 461
Query: 362 C-------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
C L+ A+ G A M G + Y L L G W
Sbjct: 462 CGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTA 521
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI-------------------- 454
A ++ K+K+ KP +++++ L+ GG+ +I
Sbjct: 522 AQSIINKMKN-EGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLV 580
Query: 455 ---------------FQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
FQ M +P++ N+ML +Y++N M+ KA E+F+ +
Sbjct: 581 ISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGG-- 638
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQ-WE 531
L PD TY+SM++ A +++ WE
Sbjct: 639 -----------LSPDLITYNSMMDMYAKSNESWE 661
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 62/336 (18%), Positives = 129/336 (38%), Gaps = 36/336 (10%)
Query: 353 GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR- 411
GL + +Y ++ A EG+ A+ +++ GV T +Y + GR
Sbjct: 184 GLDVRAY-----TTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRS 238
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVN 470
W + ++E++++ +P T + +I + G +D+ ++ F+ +K P + T N
Sbjct: 239 WPQIVAMLEEMRA-AGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYN 297
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
A+L+V+ + + +A + +E + KPD TY+ + + A A +
Sbjct: 298 ALLQVFGKAGNYMEALRVLKEMEESGC-------------KPDAVTYNELAGSYARAGFY 344
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
E M G + + ++ AGK FD + + G IP+ + +
Sbjct: 345 EEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLI 404
Query: 591 LIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNA 650
L +S + + ++ M+ + W + R + ++L + +C
Sbjct: 405 LGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGV 464
Query: 651 ASSEITVSNLSRALHALCRSEKERDLSSSAHFGSQA 686
LCR +S+ GS+A
Sbjct: 465 ---------------ELCRDTFNTLISAYGRCGSRA 485
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 73/422 (17%), Positives = 154/422 (36%), Gaps = 111/422 (26%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G+ G +A+++ DW +K + Y +L +LGK R FN+ML
Sbjct: 369 IMTAYGNAGKVDEALALFDW---MKKNGFIPYVNTYNLILGMLGKKSR-------FNVML 418
Query: 256 E--------DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR---- 303
E C P+ ++++ G+ G+ + +++ERM+ + ++
Sbjct: 419 EMLGEMSRSGCT--PNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLIS 476
Query: 304 ------------KNWDPV----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
K +D + P L YNA+L+ W + +++ G KP
Sbjct: 477 AYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKP 536
Query: 348 SAATYGLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAV 384
+ +Y L ++ + + +L+ LV + ++ ++ A
Sbjct: 537 NDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAF 596
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS-------------------- 424
+ + RG ++ + NG ++ A + + IK
Sbjct: 597 QEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKS 656
Query: 425 ------------LRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
L+ S KP +++ ++ G I + I M D P + T
Sbjct: 657 NESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTY 716
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
+ ++ Y+ +MFS+A+E+ + N L P E TY ++++ A +
Sbjct: 717 HTLVGGYASREMFSEAREVVSYMIQRN-------------LSPMELTYRRVVDSYCKAKR 763
Query: 530 WE 531
++
Sbjct: 764 FD 765
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 24/163 (14%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-------- 362
+PDLV++N++L+ + ++ +F +++ GL P TY M+ Y +
Sbjct: 605 KPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEK 664
Query: 363 LLK---------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+LK ++ F ++G I EA + M GV Y+ L
Sbjct: 665 ILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGGYA 724
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
+ + +A VV + R+ P+E+T+ ++ S D+
Sbjct: 725 SREMFSEAREVVSYMIQ-RNLSPMELTYRRVVDSYCKAKRFDE 766
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 159/406 (39%), Gaps = 63/406 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G G +A+ + D G + + Y L+ KA + EA RI M+
Sbjct: 51 LLHGFCKVGELDEALKIFD---GAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV 107
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP-----SKRIKNMHR------- 303
+ NL PD+ Y+S+ L + G + E LI P S I + R
Sbjct: 108 SE-NLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSE 166
Query: 304 --KNWDPVL----EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
K + VL EP++ YN +++ + + F +F L K GL+P A TY + ++
Sbjct: 167 ALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFID 226
Query: 358 SY------------------RRCLLKV-----LVRAFWEEGKINEAVAAVRNMEQRGVVG 394
+ C+ V ++ +E +++EA + ME +G
Sbjct: 227 GLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSP 286
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI---ISSMDGGHIDDC 451
A + L C C G+W+ AM +++ R KP +T+ L+ + G I +
Sbjct: 287 NAISFNTLICGQCRAGKWKKAMTTFKEMLK-RGVKPTVVTYNILVDGLCKARQEGRIKEA 345
Query: 452 ISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 510
I++F M + P++ T +A++ + A+ L +
Sbjct: 346 ITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM-------------EAKGC 392
Query: 511 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
P+ YTY+S++ + + ++ M GC D + ++
Sbjct: 393 IPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 152/394 (38%), Gaps = 58/394 (14%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+V YN +L+ + +F K G P TY L+ F
Sbjct: 43 PDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTY------------NALINGF 90
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKP 430
+ K++EA ++ M +V Y L LC NGR +A ML+V+K S P
Sbjct: 91 CKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFS-----P 145
Query: 431 LEITFTGLI---ISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
IT++ LI + G + + + +F +K EP + T N ++ + D ++A
Sbjct: 146 NVITYSTLISGLCRELRG--VSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAF 203
Query: 487 ELFEETTR----ANSSGYT-FLSG-----------------DGAPLKPDEYTYSSMLEAS 524
ELF + ++ YT F+ G D PD ++++++
Sbjct: 204 ELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 263
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
+ + E + GM GC + L+ RAGK F +L+ G P
Sbjct: 264 CKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTV 323
Query: 585 LFF---TEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRISRDKL 638
+ + + L +A + ++A+ L +AM P +T ++ L + D
Sbjct: 324 VTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT---YSALIDGLGKAGKLDDA 380
Query: 639 EKLLNALCNCNAASSEITVSNLSRALHALCRSEK 672
+LL A+ A V + + LC EK
Sbjct: 381 RRLLGAM---EAKGCIPNVYTYNSLISGLCGLEK 411
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH- 457
Y L LCN GR DA + E++ +S P +T+ L+ G +D+ + IF
Sbjct: 13 YNALLSGLCNGGRMSDAQALYERMIKAGYS-PDVVTYNTLLHGFCKVGELDEALKIFDGA 71
Query: 458 MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
+K P++ T NA++ + + D +A+ + + N L PD TY
Sbjct: 72 VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSEN-------------LVPDVVTY 118
Query: 518 SSMLEA 523
+S++
Sbjct: 119 NSLVNG 124
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 163/378 (43%), Gaps = 50/378 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILG 239
M +SGL E L+ + G W A +L + + R+++ + F+++++LA
Sbjct: 377 MEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQM----EARNVQPNTFIFSRILASYR 432
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
G + + M ++ N+ PD Y+ + T G+ L ++ +RM +
Sbjct: 433 DRGEWQKTFEVLREM-KNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEG----- 486
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG-VFWVFKQLRKSGLKPSAATYGLAMES 358
+EPD+V +N +++ C H + +F+++++ G P TY
Sbjct: 487 ----------IEPDVVTWNTLID-CHRKHGYHDRAAELFEEMQERGYLPCPTTY------ 529
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
+++ + E+ K +E + M+ +G++ Y L ++GR+ DA+
Sbjct: 530 ------NIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDC 583
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 477
+E +KS KP + LI + G + ++ ++ M D P++ +N+++ +
Sbjct: 584 LEAMKS-AGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFG 642
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+ +A + + + +KPD TY+++++A +++ VY
Sbjct: 643 EDRRDIEAFSILQYMKEND-------------VKPDVVTYTTLMKALIRVDKFDKVPAVY 689
Query: 538 KGMALSGCQLDQTKHAWL 555
+ M LSGC D A L
Sbjct: 690 EEMILSGCTPDGKARAML 707
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 149/378 (39%), Gaps = 47/378 (12%)
Query: 237 ILG--KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
ILG KAG P+ AL + M++ L P + + +V LG G +E + E M++
Sbjct: 288 ILGFAKAGDPNRALYFLS-MVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGG 346
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
L+P + +NA+L K + ++ KSGL P TYGL
Sbjct: 347 ---------------LKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGL 391
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
LV A+ G+ A ++ ME R V ++ + + G WQ
Sbjct: 392 ------------LVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQK 439
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 473
V+ ++K+ + KP + +I + +D + + M + EP++ T N ++
Sbjct: 440 TFEVLREMKN-SNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLI 498
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
+ ++ +A ELFEE GY P TY+ M+ + +W+
Sbjct: 499 DCHRKHGYHDRAAELFEEM---QERGYL----------PCPTTYNIMINSLGEQEKWDEV 545
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 593
+ + M G + + L+ +G+ + +++ AG P + LI
Sbjct: 546 KILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNA-LIN 604
Query: 594 AIVQSNY-EKAVALINAM 610
A Q E+AV M
Sbjct: 605 AFAQRGLSEQAVNAYRVM 622
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 96/257 (37%), Gaps = 73/257 (28%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC------------ 362
+ YNA++ AC ++ + + ++R+ G + Y L ++S R
Sbjct: 210 LTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLY 269
Query: 363 -------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
LL ++ F + G N A+ + ++ G+ S + + L N+
Sbjct: 270 EEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNH 329
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV 469
GR ++A + E++K +GG +P I
Sbjct: 330 GRTEEAEAIFEEMK--------------------EGG---------------LKPRIKAF 354
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
NA+LK Y+R +A+ + E ++ L PDE+TY +++A A +
Sbjct: 355 NALLKGYARKGSLKEAESIISEMEKSG-------------LSPDEHTYGLLVDAYANVGR 401
Query: 530 WEYFEYVYKGMALSGCQ 546
WE ++ K M Q
Sbjct: 402 WESARHLLKQMEARNVQ 418
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 100/244 (40%), Gaps = 35/244 (14%)
Query: 114 RELKEMFEKDL---NWVLDDDVQLG-SDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSERE 169
R L E E D+ N ++D + G D A+ E E+ + ++++ L E+E
Sbjct: 481 RMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQE 540
Query: 170 MTAKNWKFVRI----MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV--YGLKDKR 223
W V+I M GL+ L+ G G + A+ L+ + GLK
Sbjct: 541 ----KWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLK--- 593
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
S +Y L+ + G +A+ + +M+ D L P + A +S+ G+ E
Sbjct: 594 --PSATMYNALINAFAQRGLSEQAVNAYRVMISD-GLRPSLLALNSLINAFGEDRRDIEA 650
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+++ M++ K PD+V Y ++ A + ++ V V++++ S
Sbjct: 651 FSILQYMKENDVK---------------PDVVTYTTLMKALIRVDKFDKVPAVYEEMILS 695
Query: 344 GLKP 347
G P
Sbjct: 696 GCTP 699
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 113/560 (20%), Positives = 215/560 (38%), Gaps = 90/560 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+LK L D G A+++ + + +R Y L+ L K G +AL++F+ ML
Sbjct: 178 ILKALVDSGVILLALALYNRMVAAGCA---PNRATYNVLMDGLCKQGMAGDALKMFDEML 234
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D + P++ Y + +L G + E V+L+ M+ K PD V
Sbjct: 235 -DRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCL---------------PDEV 278
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES------------YRRCL 363
YNA L+ + F L+ G Y ++ Y + +
Sbjct: 279 TYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTM 338
Query: 364 LK-----------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
L+ +++R E G+I +A++ + M+++G V Y + LC++G
Sbjct: 339 LERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDL 398
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTVN 470
+ A + ++ L+++ L+ T ++I + G +D+ + IF M +H C+P + T N
Sbjct: 399 ERAHTLRSEM--LQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYN 456
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTF---------------------LSGDGAP 509
A++ + R +A+ LF + N+ + G
Sbjct: 457 ALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQV 516
Query: 510 LK--------------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
LK PD TY++++ A + ++K + L G D+ + L
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTL 576
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
+ RA + + F ++L++G P + M+ +A+ L + Y P
Sbjct: 577 IDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL--WLDYLPK 634
Query: 616 HITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 675
+E+ + I L+ + L + I+ + + L LC+ + D
Sbjct: 635 KYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDD 694
Query: 676 LSSSAH----FGSQAIDISP 691
H FG IDI+P
Sbjct: 695 ALRIFHTLQEFG---IDITP 711
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 152/434 (35%), Gaps = 94/434 (21%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D L ++ M K M G+M LL L + G +A+ +L +
Sbjct: 212 VLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLG---SM 268
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
KDK L Y L+ L K GR +EA + +ML+D + Y + L Q
Sbjct: 269 KDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRL-VMLQDGGFALGLKGYSCLIDGLFQA-- 325
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
R + K M +N + PD+V+Y ++ C + + +
Sbjct: 326 ---------RRFDEGFGYYKTMLERN----ISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
++K G P Y +LKVL + G + A M Q +V ++
Sbjct: 373 MKKKGFVPDTFCYNT--------VLKVLC----DHGDLERAHTLRSEMLQNNLVLDSTTQ 420
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
+ C LC G +AM + +++ P +T+ LI G +++ +F M+
Sbjct: 421 TIMICGLCKRGLVDEAMQIFDEMGE-HGCDPTVMTYNALIDGFYREGRLEEARMLFHKME 479
Query: 460 -----------------------------DHCE--------------------PNIGTVN 470
D C+ P++ T N
Sbjct: 480 MGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYN 539
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
++ + A LF+E L G + PDE TY ++++ AH+
Sbjct: 540 TLINGLCKARNLDGAVRLFKELQ---------LKG----ISPDEITYGTLIDGLLRAHRE 586
Query: 531 EYFEYVYKGMALSG 544
+++ + SG
Sbjct: 587 NDAMMLFQNILQSG 600
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 28/241 (11%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAIL 238
M Q+ L+ ++ GL +G +AM + D + +G + Y L+
Sbjct: 408 MLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCD-----PTVMTYNALIDGF 462
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG--QVGLLKELVKLIERMRQKPSK 296
+ GR EA +F+ M N P + + +TLG QV + L KL+ M Q
Sbjct: 463 YREGRLEEARMLFHKMEMGNN--PSLF----LRLTLGANQVCDSESLRKLVHDMCQSGQV 516
Query: 297 -RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ + R D + PD+V YN ++N + G +FK+L+ G+ P TYG
Sbjct: 517 LKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGT- 575
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+ L+RA E N+A+ +N+ Q G + S+Y + LC + A
Sbjct: 576 -------LIDGLLRAHRE----NDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQA 624
Query: 416 M 416
+
Sbjct: 625 I 625
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 29/222 (13%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P VYN +L A V S ++ ++ +G P+ ATY VL+
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATY------------NVLMDGL 217
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
++G +A+ M RG++ +Y L LCN G+ +A+ ++ +K + P
Sbjct: 218 CKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKD-KGCLPD 276
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
E+T+ + G +++ ++D G LK YS LF+
Sbjct: 277 EVTYNAFLSGLCKVGRVNEAFQRLVMLQD------GGFALGLKGYS-----CLIDGLFQA 325
Query: 492 TTRANSSGY--TFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
GY T L + + PD Y+ M+ A A + E
Sbjct: 326 RRFDEGFGYYKTMLERN---ISPDVVLYTIMIRGCAEAGRIE 364
>gi|168054024|ref|XP_001779433.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669118|gb|EDQ55711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 156/378 (41%), Gaps = 44/378 (11%)
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI 264
SWRQA+ + W+ + + + Y +L +L + GR E + + + ++ PD
Sbjct: 22 SWRQALLLFRWLRA--EHSSSLNIYTYNVMLKVL-RRGRQWEFSQQIAEDMANADVRPDN 78
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
Y ++ + + +RM + PD+V Y+ +++
Sbjct: 79 ITYSTLISCANRCNYQDAAMAWFDRMHEAGCV---------------PDVVTYSTMIDVY 123
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAV 384
++ ++++++++G KP TYG +VR F G I AV+
Sbjct: 124 GKMGKYDEAIALYERVKQAGWKPDKVTYG------------TMVRLFGRAGYIRAAVSIF 171
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
M+ GV A VY + CL GR A+ V E+++ KP +T + ++ +
Sbjct: 172 EEMKGSGVQPDAIVYNIMIACLGRAGRMGHALKVFEEMER-EGVKPNAVTLSTVMETYSR 230
Query: 445 GGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G++ + + +FQ ++ ++ NA+LK+ + S+A++ E T SG+
Sbjct: 231 CGNVMEGLEVFQRLRQGVACDVIVYNAVLKMCREAGLASEAEQYLREMTE---SGH---- 283
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+P+++TY +M+ A + M +G Q+D + LL A +
Sbjct: 284 ------QPNDWTYRNMISVYAKKGMAVEAHRTFSQMVEAGYQIDVMAYTSLLQAYGNAKE 337
Query: 565 CHLLEHAFDSLLEAGEIP 582
+ ++ D + P
Sbjct: 338 YNKVQEILDEMTSVNCAP 355
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKE 487
+P IT++ LI + + D ++ F M + C P++ T + M+ VY + + +A
Sbjct: 75 RPDNITYSTLISCANRCNYQDAAMAWFDRMHEAGCVPDVVTYSTMIDVYGKMGKYDEAIA 134
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
L+E R +G+ KPD+ TY +M+ A +++ M SG Q
Sbjct: 135 LYE---RVKQAGW----------KPDKVTYGTMVRLFGRAGYIRAAVSIFEEMKGSGVQP 181
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
D + ++ RAG+ F+ + G P+ + + ++
Sbjct: 182 DAIVYNIMIACLGRAGRMGHALKVFEEMEREGVKPNAVTLSTVM 225
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA--- 571
YTY+ ML+ QWE+ + + + MA + + D ++ L+ S A +C+ + A
Sbjct: 44 YTYNVMLKVLRRGRQWEFSQQIAEDMANADVRPDNITYSTLI---SCANRCNYQDAAMAW 100
Query: 572 FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL---INAMAYAPFHITERQWTELF-E 627
FD + EAG +P + ++ M+ Y++A+AL + + P +T LF
Sbjct: 101 FDRMHEAGCVPDVVTYSTMIDVYGKMGKYDEAIALYERVKQAGWKPDKVTYGTMVRLFGR 160
Query: 628 SNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA 663
+ R + E++ + +A I ++ L RA
Sbjct: 161 AGYIRAAVSIFEEMKGSGVQPDAIVYNIMIACLGRA 196
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/476 (20%), Positives = 188/476 (39%), Gaps = 81/476 (17%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG-LKDKRDLKSRFVYTKLLAILG 239
+ GL+ TE L+K G+ G + + WV+ +K+ S + Y L+ L
Sbjct: 176 LKDRGLLMTESAANSLIKSFGNLGLVEELL----WVWRRMKENGIDPSLYTYNFLVNGLV 231
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
+ A ++F +M + + PD Y+ + + G L QK ++ +
Sbjct: 232 NSMFIESAEKVFEVM-DGGKIVPDTVTYNIMIKGYCKAGKL-----------QKAMEKFR 279
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+M KN ++PD + Y ++ AC + ++ ++ + GL+ +Y L
Sbjct: 280 DMEMKN----VKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSL----- 330
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
++ ++ K EA A M Q+G ++Y L NG ++AM +
Sbjct: 331 -------VIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLF 383
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKV---- 475
E++K+ +P +T++ L+ G +DD + +F D C +NAM
Sbjct: 384 ERMKN-EGFEPDAVTYSVLVNGLCKSGRLDDGMELF----DFCRNKGVAINAMFYASLID 438
Query: 476 -YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
+ A+ LFEE + + D Y Y+++++A A + +
Sbjct: 439 GLGKAGRIEDAENLFEEMSEKGCA-------------RDSYCYNAIIDALAKHGKIDQAL 485
Query: 535 YVYKGMALSGCQLDQTKHAW-LLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEM 590
++ M GC DQT + + +L++ K H E A D +++ G P F +
Sbjct: 486 ALFGRMEEEGC--DQTVYTFTILIDG--LFKEHKNEEAIKFWDKMIDKGITPTVASFRAL 541
Query: 591 LIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALC 646
I + +A +++ + AP I I E ++N LC
Sbjct: 542 AIGLCLCGKVARACKILDDL--APMGI---------------IPETAFEDMINTLC 580
>gi|224081220|ref|XP_002306340.1| predicted protein [Populus trichocarpa]
gi|222855789|gb|EEE93336.1| predicted protein [Populus trichocarpa]
Length = 416
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 161/360 (44%), Gaps = 47/360 (13%)
Query: 143 VEWHPEKR-----WRSEA-EAIRVLVDRLSEREMTAKNW-KFVRIMNQSGLMFTEGQMLK 195
V P+KR +SEA E +RVLV S+++ K K+V++M TE +
Sbjct: 6 VSTRPKKRPVPTDEKSEAQELVRVLVRSFSDKQPLVKTLNKYVKVMR------TEHCFM- 58
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L + LG W Q + V W+ K + + Y+KL++++GK G+ A+ +F+ M
Sbjct: 59 LFEELGKTDKWLQCLEVFRWMQ--KQRWYVADNGCYSKLISVMGKKGQTRMAMWLFSEM- 115
Query: 256 EDCNLYPDIAAYHS-VAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ PD + Y++ + L K L K + +++K++ R +P++
Sbjct: 116 RNSGCRPDTSVYNALITAHLHSKDKAKSLTKALAYF-----EKMKSIER------CQPNV 164
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V YN +L A + V +FK L +S + P TY +++Y +
Sbjct: 165 VTYNIILRAFAQARNVNQVNALFKDLEESIVSPDIYTYNGVLDAYGK------------N 212
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLE 432
G I E + + M+ + L + + G+ QD + + KSL S KP
Sbjct: 213 GMIREMESVLSRMKIDQCKPDIITFNLL---IDSYGKKQDFEKMEQVFKSLLRSKEKPTL 269
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
TF +I++ D S+F+ M D P+ T +++ +Y D SKA+++F++
Sbjct: 270 PTFNSMIVNYGKARLKDKAESVFKKMADMRYTPSFITFESLIMMYGICDCVSKARDIFDD 329
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 127/322 (39%), Gaps = 55/322 (17%)
Query: 371 FWEEGKIN---EAVAAVRNME-QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
F E GK + + + R M+ QR V Y +L + G+ + AM + ++++
Sbjct: 60 FEELGKTDKWLQCLEVFRWMQKQRWYVADNGCYSKLISVMGKKGQTRMAMWLFSEMRN-S 118
Query: 427 HSKPLEITFTGLIISSM----DGGHIDDCISIFQHMK--DHCEPNIGTVNAMLKVYSRND 480
+P + LI + + + ++ F+ MK + C+PN+ T N +L+ +++
Sbjct: 119 GCRPDTSVYNALITAHLHSKDKAKSLTKALAYFEKMKSIERCQPNVVTYNIILRAFAQAR 178
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
++ LF++ + S PD YTY+ +L+A E V M
Sbjct: 179 NVNQVNALFKDLEESIVS-------------PDIYTYNGVLDAYGKNGMIREMESVLSRM 225
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI---QAIVQ 597
+ C+ D L+ + +E F SLL + E P F M++ +A ++
Sbjct: 226 KIDQCKPDIITFNLLIDSYGKKQDFEKMEQVFKSLLRSKEKPTLPTFNSMIVNYGKARLK 285
Query: 598 SNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNA------- 650
E + M Y P IT FES ++ +C+C +
Sbjct: 286 DKAESVFKKMADMRYTPSFIT-------FES----------LIMMYGICDCVSKARDIFD 328
Query: 651 ----ASSEITVSNLSRALHALC 668
+ E+ VS L+ L+ C
Sbjct: 329 DMVESGKEVKVSTLNAVLNVYC 350
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/456 (19%), Positives = 181/456 (39%), Gaps = 52/456 (11%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLM---FTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
VL+ L + + F + M GL+ FT G L+ GL +A ++LD +
Sbjct: 284 VLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGA---LINGLCKSRRSNEAKALLDEM 340
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
+ K ++ VY L+ + G EA ++ M+ + P+ Y ++ L +
Sbjct: 341 SCAELKPNV---VVYANLIDGFMREGNADEAFKMIKEMVA-AGVQPNKITYDNLVRGLCK 396
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
+G + L+++M +++ HR PD + YN ++ H K F +
Sbjct: 397 MGQMDRASLLLKQM-------VRDSHR--------PDTITYNLIIEGHFRHHSKKDAFRL 441
Query: 337 FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
++ +G+ P+ TY +++ + G+ +A + M +G+ A
Sbjct: 442 LSEMENAGISPNVYTY------------SIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 489
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
VY L C G A + +K+ + + P + LI G +++ F
Sbjct: 490 FVYAPLISGYCREGNVSLACEIFDKMTKV-NVLPDLYCYNSLIFGLSKVGRVEESTKYFA 548
Query: 457 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
M++ PN T + ++ Y +N A++L + R +G LKP++
Sbjct: 549 QMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ---RMLDTG----------LKPNDV 595
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
Y +LE+ + E +K M G LD + L+ S +G +
Sbjct: 596 IYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGI 655
Query: 576 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ G +P ++ ++ ++ EKA +++ M+
Sbjct: 656 EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 691
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 151/371 (40%), Gaps = 50/371 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
++ GL G +A +L+ + GLK + FVY L++ + G A IF+
Sbjct: 460 MIHGLCQSGEPEKASDLLEEMTTKGLK-----PNAFVYAPLISGYCREGNVSLACEIFDK 514
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M + N+ PD+ Y+S+ L +VG ++E K +M+++ L P+
Sbjct: 515 MTK-VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG---------------LLPN 558
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
Y+ +++ + + + + +++ +GLKP+ Y +ESY ++
Sbjct: 559 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY------------FK 606
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
I + + ++M +GV+ +Y L L ++G + A V+ I+ S P
Sbjct: 607 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEK-NGSVPDVH 665
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
++ LI + I M K +PNI NA++ ++ S A+ +F
Sbjct: 666 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 725
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
L P+ TY+S+++ S Y+Y M +G D +
Sbjct: 726 LAKG-------------LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 772
Query: 553 AWLLVEASRAG 563
+ L S AG
Sbjct: 773 SVLTTGCSSAG 783
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 146/380 (38%), Gaps = 52/380 (13%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
+S V L+ K+GR +A + LM+ D + P I +++ L + + L K
Sbjct: 172 RSPAVLDVLVDTYKKSGRVQDAAEVV-LMMRDRGMAPSIRCCNALLKDLLRADAMALLWK 230
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ E M + PD+ Y+ ++ A ++ V ++R+ G
Sbjct: 231 VREFMVGAG---------------ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGC 275
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
+ TY VL+ G + EA ++ME G+V Y L
Sbjct: 276 GLNTVTY------------NVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALING 323
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 464
LC + R +A +++++ S KP + + LI M G+ D+ + + M +P
Sbjct: 324 LCKSRRSNEAKALLDEM-SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQP 382
Query: 465 NIGTVNAMLKVYSRNDMFSKA----KELFEETTRANSSGYTFL----------------- 503
N T + +++ + +A K++ ++ R ++ Y +
Sbjct: 383 NKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLL 442
Query: 504 -SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
+ A + P+ YTYS M+ + + E + + M G + + +A L+ R
Sbjct: 443 SEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCRE 502
Query: 563 GKCHLLEHAFDSLLEAGEIP 582
G L FD + + +P
Sbjct: 503 GNVSLACEIFDKMTKVNVLP 522
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 124/351 (35%), Gaps = 41/351 (11%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY---RR---------- 361
V YN ++ S + F K + GL P TYG + RR
Sbjct: 280 VTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDE 339
Query: 362 ----------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
+ L+ F EG +EA ++ M GV Y L LC G+
Sbjct: 340 MSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQ 399
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 470
A L+++++ H +P IT+ +I D + M++ PN+ T +
Sbjct: 400 MDRASLLLKQMVRDSH-RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYS 458
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
M+ ++ KA +L EE T LKP+ + Y+ ++
Sbjct: 459 IMIHGLCQSGEPEKASDLLEEMTTKG-------------LKPNAFVYAPLISGYCREGNV 505
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
++ M D + L+ S+ G+ F + E G +P+ ++ +
Sbjct: 506 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 565
Query: 591 LIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKL 641
+ + + E A L+ M + + +L ES D +EK+
Sbjct: 566 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES---YFKSDDIEKV 613
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 28/227 (12%)
Query: 446 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS---KAKELFEETTRANSSGYT 501
G + D + M+D P+I NA+LK R D + K +E
Sbjct: 188 GRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMV----------- 236
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
GA + PD YTYS+++EA +++ + V M GC L+ + L+ R
Sbjct: 237 -----GAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR 291
Query: 562 AGKCHLLEHAFD---SLLEAGEIPHPLFFTEMLIQAIVQS-NYEKAVALINAMAYAPFHI 617
+G +E AF + + G +P F LI + +S +A AL++ M+ A
Sbjct: 292 SGA---VEEAFGFKKDMEDYGLVPDG-FTYGALINGLCKSRRSNEAKALLDEMSCAELKP 347
Query: 618 TERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 664
+ L + + D+ K++ + ++IT NL R L
Sbjct: 348 NVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGL 394
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 102/269 (37%), Gaps = 31/269 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y L+ L +G A R+ + +E PD+ Y S L+ L K +R
Sbjct: 631 IYGILIHNLSSSGNMEAAFRVLS-GIEKNGSVPDVHVYSS---------LISGLCKTADR 680
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+K + M +K DP ++V YNA+++ S VF + GL P+
Sbjct: 681 --EKAFGILDEMSKKGVDP----NIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 734
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L+ + G I+ A M G+ A VY L +
Sbjct: 735 VTY------------TSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 782
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGT 468
G + AM ++E++ LR + +F L+ G + + + + M PN T
Sbjct: 783 GDLEQAMFLIEEM-FLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALT 840
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANS 497
+ ++ S S+ +F E + S
Sbjct: 841 IENIISGLSEAGKLSEVHTIFVELQQKTS 869
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 157/388 (40%), Gaps = 51/388 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ AG ALR F+ M E P++ Y+++ ++ + + +L+
Sbjct: 206 FTYNILIRGFCLAGNLDVALRFFDRM-EKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLR 264
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M K LEP+L+ YN V+N + K + +V ++ K G
Sbjct: 265 SMALKG---------------LEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLD 309
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY L++ + +EG ++A+ M + G+ + Y L +C
Sbjct: 310 EVTY------------NTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCK 357
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 467
G A +++++ +R P E T+T L+ G++++ + + M D+ P++
Sbjct: 358 AGNMNRATEFLDQMR-VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVV 416
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T NA++ + A + E+ L PD +YS++L +
Sbjct: 417 TYNALINGHCIAGKMVDAIAVLEDMKEKG-------------LTPDVVSYSTVLSGFCRS 463
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLL---VEASRAGK-CHLLEHAFDSLLEAGEIPH 583
+ + V + M G + D ++ L+ E R + C L FD +L G P
Sbjct: 464 YDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDL----FDEMLRVGLPPD 519
Query: 584 PLFFTEMLIQAIVQSNYEKAVALINAMA 611
+T ++ ++ + +KA+ L N M
Sbjct: 520 EFTYTALINAYCMEGDLQKAIQLHNEMV 547
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 175/460 (38%), Gaps = 85/460 (18%)
Query: 168 REMTAKNWKFVRI-MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV--YGLKDKRD 224
RE K FV MN+ G E L+KG +G++ QA+ + + +GL
Sbjct: 287 REGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLS---- 342
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
S YT L+ + KAG + A + M L P+ Y ++ Q G + E
Sbjct: 343 -PSVITYTSLIHSMCKAGNMNRATEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 285 KLIERMRQK---PSKRIKN-------MHRKNWDPV----------LEPDLVVYNAVLNAC 324
++++ M PS N + K D + L PD+V Y+ VL+
Sbjct: 401 RVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGF 460
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY---RRC---------LLKV------ 366
S+ V +++ G+KP TY ++ + RR +L+V
Sbjct: 461 CRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDE 520
Query: 367 -----LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
L+ A+ EG + +A+ M ++GV+ Y L L R ++A ++ K
Sbjct: 521 FTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLK 580
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDM 481
+ S P ++T+ L I++C +I +V +++K + M
Sbjct: 581 L-FYEESVPSDVTYHTL---------IENCSNI----------EFKSVVSLIKGFCMKGM 620
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
++A ++FE N KPD Y+ M+ +YK M
Sbjct: 621 MTEADQVFESMLEKNH-------------KPDGTAYNVMIHGHCRGGDIRKAYSLYKEMV 667
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
SG L L+ + GK + L ++L + E+
Sbjct: 668 KSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCEL 707
Score = 43.9 bits (102), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 120/308 (38%), Gaps = 37/308 (12%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
LVD S++ + ++ ++ M +G + L+ G G A++VL+ +K
Sbjct: 386 LVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLE---DMK 442
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+K Y+ +L+ ++ EALR+ M+ + PD Y S+ +
Sbjct: 443 EKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAK-GIKPDTITYSSLIQGFCEQRRT 501
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
KE L + M + L PD Y A++NA + + ++
Sbjct: 502 KEACDLFDEMLRVG---------------LPPDEFTYTALINAYCMEGDLQKAIQLHNEM 546
Query: 341 RKSGLKPSAATY-----GLAMESYRRCLLKVLVRAFWEEGKINEA-----VAAVRNMEQR 390
+ G+ P TY GL ++ R ++L++ F+EE ++ + N+E +
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
VV + C G +A V E + H KP + +I GG I
Sbjct: 607 SVVSLIKGF-------CMKGMMTEADQVFESMLEKNH-KPDGTAYNVMIHGHCRGGDIRK 658
Query: 451 CISIFQHM 458
S+++ M
Sbjct: 659 AYSLYKEM 666
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 76/201 (37%), Gaps = 18/201 (8%)
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+ LI G++D + F M K C PN+ T N ++ Y + EL
Sbjct: 203 PNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFEL 262
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
L G L+P+ +Y+ ++ + + +V M G LD
Sbjct: 263 LRSMA---------LKG----LEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLD 309
Query: 549 QTKHAWLLVEASRAGKCH--LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
+ + L+ + G H L+ HA +L G P + +T ++ N +A
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHA--EMLRHGLSPSVITYTSLIHSMCKAGNMNRATEF 367
Query: 607 INAMAYAPFHITERQWTELFE 627
++ M ER +T L +
Sbjct: 368 LDQMRVRGLCPNERTYTTLVD 388
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/456 (19%), Positives = 181/456 (39%), Gaps = 52/456 (11%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLM---FTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
VL+ L + + F + M GL+ FT G L+ GL +A ++LD +
Sbjct: 262 VLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYG---ALINGLCKSRRSNEAKALLDEM 318
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
+ K ++ VY L+ + G EA ++ M+ + P+ Y ++ L +
Sbjct: 319 SCAELKPNV---VVYANLIDGFMREGNADEAFKMIKEMVA-AGVQPNKITYDNLVRGLCK 374
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
+G + L+++M +++ HR PD + YN ++ H K F +
Sbjct: 375 MGQMDRASLLLKQM-------VRDSHR--------PDTITYNLIIEGHFRHHSKKDAFRL 419
Query: 337 FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
++ +G+ P+ TY +++ + G+ +A + M +G+ A
Sbjct: 420 LSEMENAGISPNVYTY------------SIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 467
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
VY L C G A + +K+ + + P + LI G +++ F
Sbjct: 468 FVYAPLISGYCREGNVSLACEIFDKMTKV-NVLPDLYCYNSLIFGLSKVGRVEESTKYFA 526
Query: 457 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
M++ PN T + ++ Y +N A++L + R +G LKP++
Sbjct: 527 QMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ---RMLDTG----------LKPNDV 573
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
Y +LE+ + E +K M G LD + L+ S +G +
Sbjct: 574 IYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGI 633
Query: 576 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ G +P ++ ++ ++ EKA +++ M+
Sbjct: 634 EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 669
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 151/371 (40%), Gaps = 50/371 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
++ GL G +A +L+ + GLK + FVY L++ + G A IF+
Sbjct: 438 MIHGLCQSGEPEKASDLLEEMTTKGLK-----PNAFVYAPLISGYCREGNVSLACEIFDK 492
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M + N+ PD+ Y+S+ L +VG ++E K +M+++ L P+
Sbjct: 493 MTK-VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG---------------LLPN 536
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
Y+ +++ + + + + +++ +GLKP+ Y +ESY ++
Sbjct: 537 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY------------FK 584
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
I + + ++M +GV+ +Y L L ++G + A V+ I+ S P
Sbjct: 585 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEK-NGSVPDVH 643
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
++ LI + I M K +PNI NA++ ++ S A+ +F
Sbjct: 644 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 703
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
L P+ TY+S+++ S Y+Y M +G D +
Sbjct: 704 LAKG-------------LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 750
Query: 553 AWLLVEASRAG 563
+ L S AG
Sbjct: 751 SVLTTGCSSAG 761
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 125/353 (35%), Gaps = 41/353 (11%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY---RR-------- 361
+ V YN ++ S + F K + GL P TYG + RR
Sbjct: 256 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 315
Query: 362 ------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+ L+ F EG +EA ++ M GV Y L LC
Sbjct: 316 DEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKM 375
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 468
G+ A L+++++ H +P IT+ +I D + M++ PN+ T
Sbjct: 376 GQMDRASLLLKQMVRDSH-RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYT 434
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
+ M+ ++ KA +L EE T LKP+ + Y+ ++
Sbjct: 435 YSIMIHGLCQSGEPEKASDLLEEMTTKG-------------LKPNAFVYAPLISGYCREG 481
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
++ M D + L+ S+ G+ F + E G +P+ ++
Sbjct: 482 NVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYS 541
Query: 589 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKL 641
++ + + E A L+ M + + +L ES D +EK+
Sbjct: 542 GLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES---YFKSDDIEKV 591
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 102/269 (37%), Gaps = 31/269 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y L+ L +G A R+ + +E PD+ Y S L+ L K +R
Sbjct: 609 IYGILIHNLSSSGNMEAAFRVLS-GIEKNGSVPDVHVYSS---------LISGLCKTADR 658
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+K + M +K DP ++V YNA+++ S VF + GL P+
Sbjct: 659 --EKAFGILDEMSKKGVDP----NIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 712
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L+ + G I+ A M G+ A VY L +
Sbjct: 713 VTY------------TSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 760
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGT 468
G + AM ++E++ LR + +F L+ G + + + + M PN T
Sbjct: 761 GDLEQAMFLIEEM-FLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALT 818
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANS 497
+ ++ S S+ +F E + S
Sbjct: 819 IENIISGLSEAGKLSEVHTIFVELQQKTS 847
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 104/509 (20%), Positives = 189/509 (37%), Gaps = 51/509 (10%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
+KF I +Q G FT L + L + +A S+++ V K K S F+
Sbjct: 105 FKF--ISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVE 162
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPD------IAAYHSVAVTLGQVG-LLKELVKLI 287
+ + G +AL I D PD ++ H V + G LL ++KL
Sbjct: 163 MRVTPMCGFLVDALMI---TYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKL- 218
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
P+ I + + D ++ V+N ++N VF ++ K L+P
Sbjct: 219 -----NPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQP 273
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ ++ L+ + + G ++E ME+ Y L LC
Sbjct: 274 TVVSF------------NTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALC 321
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
+ A + +++ R P ++ FT LI G ID +Q M +P+I
Sbjct: 322 KENKMDGAHGLFDEMCK-RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDI 380
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
N ++ + +N A+ + + R L+PD+ TY+++++
Sbjct: 381 VLYNTLVNGFCKNGDLVAARNIVDGMIRRG-------------LRPDKITYTTLIDGFCR 427
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
E + K M +G +LD+ + L+ + G+ E A +L AG P +
Sbjct: 428 GGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVT 487
Query: 587 FTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRISRDKLEKLLN 643
+T M+ + + + L+ M + P +T + L + LL+
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT---YNVLLNGLCKLGQMKNADMLLD 544
Query: 644 ALCNCNAASSEITVSNLSRALHALCRSEK 672
A+ N +IT + L H S K
Sbjct: 545 AMLNIGVVPDDITYNTLLEGHHRHANSSK 573
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 44/244 (18%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+R + Y ++A L KA +A+ + M++ + PD Y+S+ G
Sbjct: 109 DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS-GVMPDCMTYNSIVHGFCSSGQP 167
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
KE + +++MR +EPD+V YN++++ + + +F +
Sbjct: 168 KEAIVFLKKMRSDG---------------VEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 212
Query: 341 RKSGLKPSAATYGLAMESY-----------------------RRCLLKVLVRAFWEEGKI 377
K GLKP TYG ++ Y + +LV A+ ++ K+
Sbjct: 213 TKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKV 272
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI--KSLRHSKPLEITF 435
EA+ M Q+G+ A Y + LC +GR +DAML E++ + LR P I +
Sbjct: 273 EEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLR---PDSIVY 329
Query: 436 TGLI 439
LI
Sbjct: 330 NSLI 333
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/372 (20%), Positives = 141/372 (37%), Gaps = 50/372 (13%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQVGLL 280
+R + F Y LL L R EAL + ++M +D + PD+ +Y +V + G L
Sbjct: 45 RRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL 104
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+++ D + P++V YN+++ A + V +
Sbjct: 105 DKML----------------------DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 142
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
KSG+ P TY +V F G+ EA+ ++ M GV Y
Sbjct: 143 VKSGVMPDCMTY------------NSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYN 190
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-K 459
L LC NGR +A + + + R KP T+ L+ G + + + M +
Sbjct: 191 SLMDYLCKNGRCTEARKIFDSMTK-RGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVR 249
Query: 460 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
+ PN + ++ Y++ + +A +F + + L P+ TY +
Sbjct: 250 NGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG-------------LNPNAVTYGT 296
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 579
+++ + + E ++ M G + D + L+ K E F +L+ G
Sbjct: 297 VIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRG 356
Query: 580 EIPHPLFFTEML 591
+FF ++
Sbjct: 357 ICLSTIFFNSII 368
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 99/490 (20%), Positives = 190/490 (38%), Gaps = 102/490 (20%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--G 218
L+D L + + K M + GL LL+G KG+ + +LD + G
Sbjct: 192 LMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNG 251
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ + +V++ L+ K + EA+ +F+ M + L P+ Y +V L + G
Sbjct: 252 IH-----PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ-GLNPNAVTYGTVIDVLCKSG 305
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+++ + E+M D L PD +VYN+++++ +W+ +F
Sbjct: 306 RVEDAMLYFEQM---------------IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFL 350
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV------ 392
++ G+ S + ++S+ +EG++ E+ M + GV
Sbjct: 351 EMLDRGICLSTIFFNSIIDSH------------CKEGRVIESGKLFDLMVRIGVKPDIIT 398
Query: 393 ----VGTA----SVY---YELACCLCNNGRWQDAMLVVE---KIKSLRHSKPLEITFTGL 438
+G+A S++ Y + + N G + V S P T+ +
Sbjct: 399 LGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNII 458
Query: 439 IISSMDGGHIDDCISIFQHMKDHCEPNIG--------TVNAMLKVYSRNDMFSKAKELFE 490
+ DD + +FQ++ C ++ ++A+LKV RND +AK+LF
Sbjct: 459 LHGLCKNKLTDDALRMFQNL---CLMDLKLEARTFNIMIDALLKV-GRND---EAKDLF- 510
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
S +G L P+ +TY M E E + ++ M +GC +D
Sbjct: 511 ----------VAFSSNG--LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 558
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ---AIVQSNYEKAVALI 607
+++ E LL+ GEI + M+ + ++ S + L+
Sbjct: 559 MLNFIVRE----------------LLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 602
Query: 608 NAMAYAPFHI 617
+ Y +HI
Sbjct: 603 SGGKYQEYHI 612
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 158/388 (40%), Gaps = 43/388 (11%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
L + F Y+ L+ KAG EA + + ML++ ++ +I Y ++ L + G++ E
Sbjct: 269 LPNEFTYSSLIDANCKAGNLGEAFMLADEMLQE-HVDLNIVTYTTLLDGLCEEGMMNEAE 327
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+L M + + P+L Y A+++ + +F ++R+
Sbjct: 328 ELFRAMGKAG---------------VTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKD 372
Query: 345 LKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
+KP +G +V E K+ E + M++ G+ +Y L
Sbjct: 373 IKPDILLWG------------TIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMD 420
Query: 405 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 463
G +A+ ++E+++ L ++ +TF LI G + + I F M DH +
Sbjct: 421 AYFKAGNRTEAINLLEEMRDL-GTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQ 479
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
PN+ A++ +N+ AK+LF+E N + PD+ Y++M++
Sbjct: 480 PNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKN-------------MIPDKIAYTAMIDG 526
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
+ ++ + M G +LD + L+ S+ G+ ++ G IP
Sbjct: 527 NLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPD 586
Query: 584 PLFFTEMLIQAIVQSNYEKAVALINAMA 611
T +L + N ++A+ L N +
Sbjct: 587 ETLCTRLLRKHYELGNIDEAIELQNELV 614
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 138/338 (40%), Gaps = 43/338 (12%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ F Y ++ + K G A +F M + L PDI Y+++ G++GLL E V L
Sbjct: 131 TVFTYNIMIGHVCKEGDMLTARSLFEQM-KKMGLTPDIVTYNTLIDGYGKIGLLDESVCL 189
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
E M+ EPD++ YNA++N+ F F++++ LK
Sbjct: 190 FEEMKFMGC---------------EPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLK 234
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P+ +Y L+ A +EG + A+ +M + G++ Y L
Sbjct: 235 PNVISY------------STLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDAN 282
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 465
C G +A ++ +++ H +T+T L+ + G +++ +F+ M K PN
Sbjct: 283 CKAGNLGEAFMLADEMLQ-EHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPN 341
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ A++ + + KA ELF E + +KPD + +++
Sbjct: 342 LQAYTALIHGHIKVRSMDKAMELFNEMREKD-------------IKPDILLWGTIVWGLC 388
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
+ + E + + M SG + + L+ +AG
Sbjct: 389 SESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAG 426
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 168/429 (39%), Gaps = 70/429 (16%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALR-IFNL 253
+LL+ L GS+ +++L ++ K D + ++ L + H + +F L
Sbjct: 97 ELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIF---LETYATSHHLHAEINPLFLL 153
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M D + PD +++VA++L LVK K ++ +H K + PD
Sbjct: 154 MERDFAVKPD-TRFYNVALSL--------LVK------ANKLKLVETLHSKMVADAVPPD 198
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY-------------- 359
+ +N ++ A +HQ + + + + GL+P T+ M+ +
Sbjct: 199 VSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKE 258
Query: 360 ----RRCLL-----KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
C L VLV +EG+I EA+ + E+ G + L LC G
Sbjct: 259 LMVESGCELTSVSVNVLVNGLCKEGRIEEALRFI--YEEEGFCPDQVTFNALVNGLCRTG 316
Query: 411 RWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 468
+ + +++ + L L++ T+ LI G ID+ + I HM CEPN T
Sbjct: 317 HIKQGLEMMDFM--LEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVT 374
Query: 469 VNAMLKVYSRNDMFSKAKEL---------FEETTRANS--SGYTFLSGDGAPLK------ 511
N ++ + + A EL + NS G S ++
Sbjct: 375 YNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMK 434
Query: 512 -----PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
PDE+TYS ++E+ + + + + K M LSGC + + L+ + +
Sbjct: 435 EKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVG 494
Query: 567 LLEHAFDSL 575
E FD +
Sbjct: 495 DAEDIFDQM 503
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/428 (18%), Positives = 176/428 (41%), Gaps = 50/428 (11%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
++ VLV+ L + + +F I + G + L+ GL G +Q + ++D++
Sbjct: 271 SVNVLVNGLCKEGRIEEALRF--IYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFM 328
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLG 275
+ D+ + Y L++ L K G EA+ I + M+ DC P+ Y+++ TL
Sbjct: 329 LEKGFELDV---YTYNSLISGLCKLGEIDEAVEILHHMVSRDCE--PNTVTYNTLIGTLC 383
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
+ ++ +L + K + PD+ +N+++ + +
Sbjct: 384 KENHVEAATELARVLTSKG---------------VLPDVCTFNSLIQGLCLTSNREIAME 428
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+F+++++ G P TY +L+ + E ++ EA+ ++ ME G
Sbjct: 429 LFEEMKEKGCDPDEFTYS------------ILIESLCSERRLKEALMLLKEMELSGCARN 476
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
VY L LC N R DA + ++++ L S+ +T+ LI +++ +
Sbjct: 477 VVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRS-SVTYNTLINGLCKSKRVEEAAQLM 535
Query: 456 -QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 514
Q + + +P+ T MLK + + +A ++ + T L+G +PD
Sbjct: 536 DQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMT---------LNG----CEPDI 582
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 574
TY +++ A + + + + + + G L + ++ + + F
Sbjct: 583 VTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFRE 642
Query: 575 LLEAGEIP 582
++E G+ P
Sbjct: 643 MMEKGDPP 650
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/390 (19%), Positives = 159/390 (40%), Gaps = 59/390 (15%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L K GR EALR + E+ PD ++++ L + G +K+ +++++ M +K
Sbjct: 279 LCKEGRIEEALR---FIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKG--- 332
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
E D+ YN++++ + + + +P+ TY
Sbjct: 333 ------------FELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTY----- 375
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
L+ +E + A R + +GV+ + L LC + AM
Sbjct: 376 -------NTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAME 428
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVY 476
+ E++K + P E T++ LI S + + + + + M+ C N+ N ++
Sbjct: 429 LFEEMKE-KGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGL 487
Query: 477 SRNDMFSKAKELFEE-----TTRANSSGYTFLSG-------------------DGAPLKP 512
+N+ A+++F++ +R++ + T ++G +G LKP
Sbjct: 488 CKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEG--LKP 545
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
D++TY++ML+ + + + M L+GC+ D + L+ +AG+ +
Sbjct: 546 DKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLL 605
Query: 573 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
S+ G + P + +IQA+ + K
Sbjct: 606 RSVQMKGMVLTPQAYNP-VIQALCKRKRTK 634
>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
Length = 635
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 170/417 (40%), Gaps = 64/417 (15%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
R ++SR TKL+ I+ + GRP E I + ++E + P + Y ++ L
Sbjct: 70 RTVRSR---TKLMNIMIEKGRPQEVQSILDSIIEGGH-KPSLVTYTTLLAALTIQKHFDS 125
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
+ +I ++ + +EPD + +NAV+NA S + F ++++
Sbjct: 126 IHSIISQVEENG---------------MEPDSIFFNAVINAFSESGNMQEAMKYFWKMKE 170
Query: 343 SGLKPSAAT-------YGLAMESYRRCLL-----------------KVLVRAFWEEGKIN 378
SG KP+ +T YG+A E L VLVRA+ + I
Sbjct: 171 SGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNVLVRAWCNKXNIM 230
Query: 379 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
+A V M G+ A Y +A NG A ++ ++++ + +P E T +
Sbjct: 231 KAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQN-SNVQPNERTCCII 289
Query: 439 IISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVY---SRNDMFSKAKELFEETTR 494
I G I + + MKD +PN+ N+++K + D ++ L EE
Sbjct: 290 IGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFG- 348
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
+KPD T+S+++ A + A + ++ M + Q D ++
Sbjct: 349 ---------------VKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSI 393
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
L RAG+ E ++++++G P+ + FT ++ E A+ + M
Sbjct: 394 LAKGYVRAGEPEKAEEILNAMIKSGFHPNVVMFTTIINGWCSAGRMEYAIKIFEKMC 450
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/386 (19%), Positives = 143/386 (37%), Gaps = 82/386 (21%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ SE + K+ M +SG T L+KG
Sbjct: 148 VINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGY-------------------- 187
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS-VAVTLGQVGL 279
G AG P E+ ++ LM +D N+ P++ Y+ V + +
Sbjct: 188 ------------------GIAGEPEESQKLLZLMSQDENVRPNLRTYNVLVRAWCNKXNI 229
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+K N+ K L+PD V YN + A + + + +
Sbjct: 230 MKAW----------------NVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILE 273
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
++ S ++P+ R C +++ + +EGKI EA+ V M+ G+ V+
Sbjct: 274 MQNSNVQPNE----------RTCC--IIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVF 321
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 458
L + +D + V + KP ITF+ ++ + G +D C IF M
Sbjct: 322 NSLIKGFI-DAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMV 380
Query: 459 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
K +P+ + + K Y R KA+E+ + SG+ P+ ++
Sbjct: 381 KARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIK---SGF----------HPNVVMFT 427
Query: 519 SMLEASATAHQWEYFEYVYKGMALSG 544
+++ +A + EY +++ M G
Sbjct: 428 TIINGWCSAGRMEYAIKIFEKMCECG 453
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 154/388 (39%), Gaps = 46/388 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+ GL G A+ V+D + D+ F Y ++ L K G+ EA I N M+
Sbjct: 296 FVNGLCQNGHVGHALKVMDVMVQEGHDPDV---FTYNIVVNCLCKNGQLEEAKGILNQMV 352
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E L PDI ++++ V L L+E + L ++ K L PD+
Sbjct: 353 ERGCL-PDITTFNTLIVALCSGNRLEEALDLARQVTLKG---------------LSPDVY 396
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+N ++NA + +F++++ SG P TY L+ G
Sbjct: 397 TFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTY------------NTLIDNLCSLG 444
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
K+ +A+ ++ ME G + Y + LC R ++A V +++ L+ ITF
Sbjct: 445 KLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQM-DLQGISRNAITF 503
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
LI IDD + M + +PN T N++L Y + KA ++ + T
Sbjct: 504 NTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMT- 562
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
++G+ + D TY +++ A + + + +GM + G + +
Sbjct: 563 --ANGF----------EVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNP 610
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIP 582
++ R + F + E GE P
Sbjct: 611 VIQSLFRRNNTRDAMNLFREMTEVGEPP 638
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 157/414 (37%), Gaps = 73/414 (17%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK-LIERMR 291
+LL L + P ALR+ N L + P Y + LG +L+K L+ MR
Sbjct: 46 ELLTALREQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMR 105
Query: 292 QKPSK-RIKNMHR-------------------KNWDPV--LEPDLVVYNAVLNACVPSHQ 329
++ + R+ +H DP+ ++ D VVYN +LN V +
Sbjct: 106 REGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSK 165
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-----------------------LLKV 366
K + V+ ++ + G+KP T+ M++ R
Sbjct: 166 MKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTT 225
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L++ F EEG I A+ M + G T L C GR +DA+ +++ +
Sbjct: 226 LMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQ-EIAN 284
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
+P +IT+ + GH+ + + M ++ +P++ T N ++ +N +A
Sbjct: 285 GFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 344
Query: 486 KELFEE---------TTRANSSGYTFLSGDG-------------APLKPDEYTYSSMLEA 523
K + + T N+ SG+ L PD YT++ ++ A
Sbjct: 345 KGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINA 404
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+ +++ M SGC D+ + L+ GK L A D L E
Sbjct: 405 LCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGK---LGKALDLLKE 455
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/410 (19%), Positives = 161/410 (39%), Gaps = 55/410 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M+ SG+ E L++G ++GS + A+ V + + ++ L+ K
Sbjct: 211 MSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCS---PTKVTVNVLINGYCK 267
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
GR +AL + + PD Y++ L Q G + +K+++ M Q+
Sbjct: 268 LGRVEDALGYIQQEIAN-GFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGH----- 321
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+PD+ YN V+N + Q + + Q+ + G P T+
Sbjct: 322 ----------DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTF-------- 363
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
L+ A ++ EA+ R + +G+ + L LC G Q A+ + E
Sbjct: 364 ----NTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFE 419
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRN 479
++KS P E+T+ LI + G + + + + M+ C + T N ++ +
Sbjct: 420 EMKS-SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKK 478
Query: 480 DMFSKAKELFEE-----TTRANSSGYTFLSG-------DGA----------PLKPDEYTY 517
+A+E+F++ +R + T + G D A L+P+ TY
Sbjct: 479 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITY 538
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
+S+L + + + M +G ++D + L+ +AG+ +
Sbjct: 539 NSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQV 588
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 157/407 (38%), Gaps = 46/407 (11%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK 281
K+ SR Y L+ K GR + L++ M+E C+ +PDI Y+ + + L
Sbjct: 258 KKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVE-CDNFPDIQTYNILVAGFSRANRLD 316
Query: 282 ---ELVKLIERMRQKP-----SKRIKNMH--------RKNWDPVLEPDLVVYNAVLNACV 325
EL KL+ KP + I+ ++ + +D L D++ Y V+
Sbjct: 317 DALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL--DVISYTTVIKGLA 374
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
S + +F++L+ +G P+ Y ++ + G+I + +
Sbjct: 375 DSKRIDEACELFEKLKTAGCSPNVVAY------------TAVIDGLLKAGRIEDGLKNFE 422
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
+M V T + Y + LC DA V E++ + P IT+T LI
Sbjct: 423 DMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQ-KGCVPDTITYTTLIDGFSKA 481
Query: 446 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+D+ + M EP T +++ + + DM ++AKE+ +
Sbjct: 482 SKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGC------- 534
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+P + ++S+L + + E V M GC D + L+ G+
Sbjct: 535 ------EPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGR 588
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
H FDS++E G P L + ++ N E A ++ MA
Sbjct: 589 VPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 635
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 42/262 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+YT L+ +L GR EA +F+ M+E PD Y ++ ++G ++ +++E
Sbjct: 574 ILYTSLIDLLFSTGRVPEARHVFDSMIEK-GCAPDALTYGTIIQNFSKIGNVEAAGEILE 632
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M + + PD YN++++ V + F V+ ++ SG+KP+
Sbjct: 633 LMAKSG---------------VGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPN 677
Query: 349 AATYGLAMES-------------YRRCLLK-----------VLVRAFWEEGKINEAVAAV 384
A T+ + M ++ L K +L+ + G+++EA +
Sbjct: 678 AVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQF 737
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
+ M RG++ Y L L GR +A +VE + L + ++ ++ LI +D
Sbjct: 738 QEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQ-AYSALITGLID 796
Query: 445 GGHIDDCISIFQH-MKDHCEPN 465
+D +FQ MK C PN
Sbjct: 797 SSMVDTAWDVFQEMMKRGCAPN 818
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 156/401 (38%), Gaps = 46/401 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++KGL D +A + + LK + YT ++ L KAGR + L+ F M
Sbjct: 369 VIKGLADSKRIDEACELFEK---LKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDM- 424
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P Y V L + +L + K+ E+M QK PD +
Sbjct: 425 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCV---------------PDTI 469
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y +++ + + + + G +P+A TYG +V F +
Sbjct: 470 TYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYG------------SIVHGFCKLD 517
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
INEA + M +RG ++ L + GR ++A V+ ++ + R P I +
Sbjct: 518 MINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTA-RGCAPDVILY 576
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
T LI G + + +F M + C P+ T +++ +S+ A E+ E +
Sbjct: 577 TSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK 636
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
SG G PD + Y+S+++ + + VY M SG + +
Sbjct: 637 ---------SGVG----PDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 683
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
L+ + GK F +LE E+P L +LI +
Sbjct: 684 LMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGL 724
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 156/402 (38%), Gaps = 88/402 (21%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y +++ L + EA + FN M+++ PD+ A+ + LI
Sbjct: 58 YNTVISGLASIDKMDEAYKFFNSMIDN-GCEPDVIAFTT----------------LIHGF 100
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ ++ +M PD+ +Y +V++ + F + +++ +G P AA
Sbjct: 101 CKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAA 160
Query: 351 TYGL-------------AMESYRR-----CL-----LKVLVRAFWEEGKINEAVAAVRNM 387
Y + A E + R CL L+ A GK++EA R M
Sbjct: 161 AYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREM 220
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDA-----MLVVEKIKSLRHSKPLEITFTGLIISS 442
+RG V L LC G+ +A +V +K+ + R + + L+
Sbjct: 221 IERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSR------VAYNSLMDGY 274
Query: 443 MDGGHIDDCISIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
G +DD + + M + C+ P+I T N ++ +SR + A ELF+
Sbjct: 275 CKLGRVDDGLKLLLQMVE-CDNFPDIQTYNILVAGFSRANRLDDALELFK---------- 323
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWE----YFE---------YVYKGMALSGCQL 547
LS G KP+ TY+++++ A + E +F+ V KG+A S
Sbjct: 324 -LLSSYGC--KPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADS---- 376
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAF----DSLLEAGEIPHPL 585
+ A L E + C A+ D LL+AG I L
Sbjct: 377 KRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGL 418
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 32/182 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ GL G +A S+ + +K ++ V YT L+ LGKAGR EA F M
Sbjct: 684 LMHGLFKDGKTDRAFSLFKE---MLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEM 740
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ D + P+ Y S+ +L + G + E KL+E M + + PD+
Sbjct: 741 I-DRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLG---------------VNPDV 784
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
Y+A++ + S + VF+++ K G P+ TY KVL R F
Sbjct: 785 QAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTY------------KVLRRGFRAA 832
Query: 375 GK 376
G+
Sbjct: 833 GR 834
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 54/293 (18%), Positives = 116/293 (39%), Gaps = 50/293 (17%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-------- 362
EP +V YN V++ + + F + +G +P + + + +
Sbjct: 52 EPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHM 111
Query: 363 --------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
L ++ + + G ++ + M G + A+ Y+ L LC
Sbjct: 112 LLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCK 171
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLE--ITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPN 465
GR +A + E+ +R S L +TF LI + + G +D+ +++ M + EP
Sbjct: 172 LGRVDEAYELFER---MRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPY 228
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEE-------TTRA--NS--SGYTFLS--GDGAPLK- 511
+ ++++ + +A E+++ T+R NS GY L DG L
Sbjct: 229 LEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLL 288
Query: 512 --------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
PD TY+ ++ + A++ + ++K ++ GC+ + + ++
Sbjct: 289 QMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTII 341
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/446 (21%), Positives = 184/446 (41%), Gaps = 49/446 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL + + +AMS L + ++ + + Y LL+ K + RI N+M+
Sbjct: 282 MISGLMEASYFDEAMSFL---HRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMM 338
Query: 256 -EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKNW---DP 308
E CN P+ + ++S+ + KL+ RM P + N+ + +
Sbjct: 339 TEGCN--PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 396
Query: 309 VLEPDLV-----VYNAVLNA-CVPSH--------------QWKGVFWVFKQLRKSGLKPS 348
+ PDL+ +Y +L A CV + ++ F + K++ + G P
Sbjct: 397 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPD 456
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
+TY ++ K+ +A + M+ GV Y L C
Sbjct: 457 TSTY------------SKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 504
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 467
G + A + E+++S+ S P +T+T LI + + + IF M D C PN
Sbjct: 505 AGLIEQAQWLFEEMRSVGCS-PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 563
Query: 468 TVNAMLKVYSRNDMFSKAKELFEE---TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
T A++ + SKA E++ + T+ + S + F D L P+ TY ++++
Sbjct: 564 TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGL 623
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
AH+ ++ + M SGC+ + + L+ +AGK + F + + G +P
Sbjct: 624 CKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSV 683
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAM 610
+T ++ + + A+ +++ M
Sbjct: 684 HTYTSLIDRMFKDGRLDLAMKVLSQM 709
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/229 (18%), Positives = 81/229 (35%), Gaps = 30/229 (13%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N ++ C W +L+ G +PS TY LV+ G++
Sbjct: 178 NVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTY------------NALVQVLSSAGQV 225
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+ + M + G A LC GRW DA+ ++E+ K + T
Sbjct: 226 DLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIER----EDFKLDTVLCTH 281
Query: 438 LIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
+I M+ + D+ +S M+ + C PN+ T +L + + K +
Sbjct: 282 MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIIN------ 335
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+ +G P+ ++S++ + + Y + M GC
Sbjct: 336 -----MMMTEGC--NPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 377
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 68/377 (18%), Positives = 132/377 (35%), Gaps = 58/377 (15%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L G+ +A ++ M+ PD + Y V L +++ L + M+
Sbjct: 432 LCGVGKFDKAFQLIKEMMRK-GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG--- 487
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+ PD+ Y ++++ + + W+F+++R G P+ TY
Sbjct: 488 ------------VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY----- 530
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
L+ A+ + ++ +A M G Y L LC G A
Sbjct: 531 -------TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 583
Query: 418 VVEKIKSL--------------RHSKPLEITFTGLIISSMDGGH-IDDCISIFQHM-KDH 461
V K+ RH+ + G ++ + H +D + M
Sbjct: 584 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 643
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
CEPN +A++ + + A+E+F + T+ GY P +TY+S++
Sbjct: 644 CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKC---GYL----------PSVHTYTSLI 690
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
+ + + V M C + + ++ R G+ + E G
Sbjct: 691 DRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCS 750
Query: 582 PHPLFFTEMLIQAIVQS 598
P+ + +T LI + QS
Sbjct: 751 PNVVTYTA-LIDGLGQS 766
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 139/346 (40%), Gaps = 47/346 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++ + K G A +F M + L PD Y+S+ G+VG L + V E
Sbjct: 131 FTYNIMIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 189
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M+ D EPD++ YNA++N + +++++ +GLKP+
Sbjct: 190 EMK---------------DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 234
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
+Y LV AF +EG + +A+ +M + G+V Y L C
Sbjct: 235 VVSY------------STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK 282
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 467
G DA + ++ + + +T+T LI D + + +F M PN+
Sbjct: 283 IGNLSDAFRLGNEMLQVGVEWNV-VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLA 341
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
+ NA++ + + +A EL E L G G +KPD Y + + +
Sbjct: 342 SYNALIHGFVKAKNMDRALELLNE-----------LKGRG--IKPDLLLYGTFIWGLCSL 388
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK----CHLLE 569
+ E + V M G + + + L+ ++G HLL+
Sbjct: 389 EKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 434
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 128/319 (40%), Gaps = 36/319 (11%)
Query: 322 NACVPSHQWKGVF-WVFKQLRKSGLKPSAATYGLAMESYR------RCLLKVLVRAFWEE 374
N CVP GVF +F L G+ A M+ +R C L+ F +
Sbjct: 54 NVCVPGF---GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSC--NGLLHRFAKL 108
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
GK ++ ++M G T Y + C+C G + A + E++K R P +T
Sbjct: 109 GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMK-FRGLVPDTVT 167
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+ +I G +DD + F+ MKD CEP++ T NA++ + + E + E
Sbjct: 168 YNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK 227
Query: 494 ----RANSSGYTFL----SGDG--------------APLKPDEYTYSSMLEASATAHQWE 531
+ N Y+ L +G L P+EYTY+S+++A+
Sbjct: 228 GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 287
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ M G + + + L+ A + E F + AG IP+ + ++
Sbjct: 288 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 347
Query: 592 IQAIVQSNYEKAVALINAM 610
+ N ++A+ L+N +
Sbjct: 348 HGFVKAKNMDRALELLNEL 366
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/429 (20%), Positives = 167/429 (38%), Gaps = 54/429 (12%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
+F R M +GL L+ +G +QA+ + ++ + + + YT L+
Sbjct: 221 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK---FYVDMRRVGLVPNEYTYTSLI 277
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
K G +A R+ N ML+ + ++ Y ++ L +KE +L +M
Sbjct: 278 DANCKIGNLSDAFRLGNEMLQ-VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG- 335
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ P+L YNA+++ V + + +L+ G+KP YG
Sbjct: 336 --------------VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 381
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+ + C L+ KI A + M++ G+ + +Y L +G +
Sbjct: 382 I--WGLCSLE----------KIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 429
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNAML 473
+ +++++K L + +TF LI + + F + + + N AM+
Sbjct: 430 LHLLDEMKELDIEVTV-VTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 488
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
+++ A LFE+ + L PD Y+S+++ +
Sbjct: 489 DGLCKDNQVEAATTLFEQMVQKG-------------LVPDRTAYTSLMDGNFKQGNVLEA 535
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE-AGEIPHPLFFTEMLI 592
+ MA G +LD + L+ S C+ L+ A L E GE HP E+L
Sbjct: 536 LALRDKMAEIGMKLDLLAYTSLVWGLSH---CNQLQKARSFLEEMIGEGIHP---DEVLC 589
Query: 593 QAIVQSNYE 601
++++ +YE
Sbjct: 590 ISVLKKHYE 598
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 79/401 (19%), Positives = 150/401 (37%), Gaps = 68/401 (16%)
Query: 128 LDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLM 187
L D +LG++ VEW+ L+D L + E + + M+ +G++
Sbjct: 286 LSDAFRLGNEMLQVGVEWN--------VVTYTALIDGLCDAERMKEAEELFGKMDTAGVI 337
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDL---------------------- 225
L+ G + +A+ +L+ + G K DL
Sbjct: 338 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 397
Query: 226 ----------KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ +YT L+ K+G P E L + + M E DI L
Sbjct: 398 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE-----LDIEVTVVTFCVLI 452
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
GL K KL+ SK + +R + D L+ + ++ A+++ +Q +
Sbjct: 453 D-GLCKN--KLV-------SKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 502
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+F+Q+ + GL P Y M+ +++G + EA+A M + G+
Sbjct: 503 LFEQMVQKGLVPDRTAYTSLMDGN------------FKQGNVLEALALRDKMAEIGMKLD 550
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
Y L L + + Q A +E++ P E+ ++ + G ID+ + +
Sbjct: 551 LLAYTSLVWGLSHCNQLQKARSFLEEMIG-EGIHPDEVLCISVLKKHYELGCIDEAVELQ 609
Query: 456 QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
++ H NA+ +YS ++ S + +ET +N
Sbjct: 610 SYLMKHQLLTSDNDNALPNIYSDQNLVSSREHEEQETRISN 650
>gi|302757297|ref|XP_002962072.1| hypothetical protein SELMODRAFT_63596 [Selaginella moellendorffii]
gi|300170731|gb|EFJ37332.1| hypothetical protein SELMODRAFT_63596 [Selaginella moellendorffii]
Length = 413
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 152/385 (39%), Gaps = 45/385 (11%)
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
L G R A VL+W L D++ Y L+ L K G +A+ IF M +D
Sbjct: 2 LSRAGRRRTAFKVLEW---LSDRKRGIHANAYNSLITGLMKDGDEADAIAIFERMKQD-R 57
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
+ P + Y +V L V + ++ + S L+PD+ +YN
Sbjct: 58 VAPTLYTYTAVMRALAHVQGWESAHRMFSELVVHGS--------------LKPDVAMYNT 103
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
+L A H+ + V ++++RK G + TY CLL V F + + +
Sbjct: 104 MLAAYGRGHKLERVLQTWERMRKEGCVENVGTY---------CLL---VSTFVQTNQADL 151
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
A+ A M +G+ T +Y L C GRW A+ +++ KP +T+ L+
Sbjct: 152 ALDAYARMNSQGLKATDGIYRGLVCVCATQGRWLVALTFFKEMLE-SGCKPTIVTYNVLM 210
Query: 440 ISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
+ G + + + MK P+ TVNA+L F +A F SS
Sbjct: 211 RALGKAGKWEIVLDLLPRMKASGVAPDFYTVNAVLNGLIAAREFDRAMLFFHSV---KSS 267
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
G +K D Y+ +L A + WE + + M +G ++ LLV
Sbjct: 268 G----------MKLDREVYNVILVACQKSKNWEAALSLVQEMEQTGIAPNEVTFGPLLVA 317
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPH 583
A + + ++ + + +P+
Sbjct: 318 CENAKQVEVALRLYEHMKQRRCVPN 342
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/398 (19%), Positives = 170/398 (42%), Gaps = 72/398 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G A+++ + +K R + + YT ++ L A R+F+ ++
Sbjct: 33 LITGLMKDGDEADAIAIFE---RMKQDRVAPTLYTYTAVMRALAHVQGWESAHRMFSELV 89
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR-----KNWDPVL 310
+L PD+A Y+++ G+ L+ +++ ERMR++ ++N+ +
Sbjct: 90 VHGSLKPDVAMYNTMLAAYGRGHKLERVLQTWERMRKEGC--VENVGTYCLLVSTFVQTN 147
Query: 311 EPDLV-----------------VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ DL +Y ++ C +W FK++ +SG KP+ TY
Sbjct: 148 QADLALDAYARMNSQGLKATDGIYRGLVCVCATQGRWLVALTFFKEMLESGCKPTIVTYN 207
Query: 354 LAMESYRRC-----LLKVLVRA--------FWEEGKINEAVAAVRNMEQRGVVGTASV-- 398
+ M + + +L +L R F+ + + A R + R ++ SV
Sbjct: 208 VLMRALGKAGKWEIVLDLLPRMKASGVAPDFYTVNAVLNGLIAAREFD-RAMLFFHSVKS 266
Query: 399 --------YYELACCLCNNGR-WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
Y + C + W+ A+ +V++++ + P E+TF L+++ + ++
Sbjct: 267 SGMKLDREVYNVILVACQKSKNWEAALSLVQEMEQTGIA-PNEVTFGPLLVACENAKQVE 325
Query: 450 DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
+ +++HMK C PN V ++++ + M+ +A+ ++ ++
Sbjct: 326 VALRLYEHMKQRRCVPNTHVVASLIRACGKELMWQQARNIYRVSS--------------- 370
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
P+ Y Y+++++A + ++ + V + M GCQ
Sbjct: 371 ---PNVYVYNALIDAYCRSQKYHLAKKVDRRMIEEGCQ 405
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 148/364 (40%), Gaps = 77/364 (21%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ YT+L+ LGKAGR EA ++ ML D L PD+ +++ LG+VG L+EL +
Sbjct: 304 YTYTELIKGLGKAGRVEEAYDLYKNMLTD-GLTPDVVFLNNLMNILGKVGRLEELTNVFN 362
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ-WKGVFWVFKQLRKSGLKP 347
M W P +V YN V+ A S V F +++ G+ P
Sbjct: 363 EM-------------GTWR--CTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSP 407
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
S TY +L+ + + ++ +A+ + M+++G + Y L L
Sbjct: 408 SEFTYS------------ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG 455
Query: 408 NNGRWQDAMLVVEKIKS-------------LRH---------------------SKPLEI 433
R++ A + +++K ++H S P
Sbjct: 456 KAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVY 515
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
+ L+ + G +++ S+ + M+++ C +I + N +L ++R + +A E+FE
Sbjct: 516 AYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETM 575
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
+KPD TY+++L A A +E + + M G + D +
Sbjct: 576 KHCG-------------IKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITY 622
Query: 553 AWLL 556
+ +L
Sbjct: 623 SSIL 626
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 14/214 (6%)
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
+L LV+A +++A++ + R T+S Y + L G+ + V ++
Sbjct: 164 VLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDM 481
+ P IT++ LI S G D I +F MKD+C +P +L +Y +
Sbjct: 224 CNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGK 283
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
KA +LFEE RA S P YTY+ +++ A + E +YK M
Sbjct: 284 VEKALDLFEEMKRAGCS-------------PTVYTYTELIKGLGKAGRVEEAYDLYKNML 330
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
G D L+ + G+ L + F+ +
Sbjct: 331 TDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEM 364
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 83/213 (38%), Gaps = 24/213 (11%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE---L 470
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+ S VY ++ GK G+ EA+ +FN M ++ PD+ AY+++ + + G+
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEM-KNQGSGPDVYAYNALMSGMVKAGM 529
Query: 280 LKELVKLIERM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
+ E L+ +M R +R M ++PD V YN
Sbjct: 530 VNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNT 589
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+L + ++ + ++++ G + A TY
Sbjct: 590 LLGCFAHAGMFEEAARLMREMKDKGFEYDAITY 622
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 154/378 (40%), Gaps = 68/378 (17%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
K GR EALR M +PD ++ + L + G +K +++++ M
Sbjct: 277 KEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMML-------- 328
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
R+ +DP D+ YN++++ + V Q+ + P+ TY
Sbjct: 329 ---REGFDP----DIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTY------- 374
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
++ +E ++ EA + +G++ Y L LC + AM +
Sbjct: 375 -----NTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELY 429
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSR 478
+++K+ + P E T+ LI S G + + +++ + M+ C N+ T N ++ + +
Sbjct: 430 KEMKT-KGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCK 488
Query: 479 NDMFSKAKELFEET----TRANSSGYTFLSGDGA-------------------PLKPDEY 515
N ++A+E+F++ NS Y L DG L+PD++
Sbjct: 489 NKRIAEAEEIFDQMELQGVSRNSVTYNTLI-DGLCKSERVEEASQLMDQMIMEGLRPDKF 547
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC---------- 565
TY+S+L A + + + MA GC+ D + L+ +AG+
Sbjct: 548 TYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTI 607
Query: 566 -----HLLEHAFDSLLEA 578
+L HA++ +++A
Sbjct: 608 QMKGINLTPHAYNPVIQA 625
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 116/293 (39%), Gaps = 42/293 (14%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ PD+ +N ++ A +HQ + + +++ GL P T+ M+
Sbjct: 191 IRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQ------------ 238
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
F EEG ++ A+ M + G V T L C GR ++A+ +E++
Sbjct: 239 GFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFF 298
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML----KVYSRNDMFSK 484
P + TF L+ GH+ + + M ++ +P+I T N+++ K+ ++
Sbjct: 299 PDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKV 358
Query: 485 AKELFEETTRANSSGYT--------------------FLSGDGAPLKPDEYTYSSMLEAS 524
++ E N+ Y L+G G + PD TY+S+++
Sbjct: 359 LNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKG--ILPDVCTYNSLIQGL 416
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+ +YK M GC D+ + L+ GK L+ A + L E
Sbjct: 417 CLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGK---LQEALNLLKE 466
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 69/177 (38%), Gaps = 29/177 (16%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+F Y LL KAG +A I M D PDI Y ++ L + G ++ KL+
Sbjct: 546 KFTYNSLLTYFCKAGDIKKAADIVQTMASD-GCEPDIVTYGTLIAGLCKAGRVEAATKLL 604
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
R M N P YN V+ A + K +F+++ + P
Sbjct: 605 ---------RTIQMKGINLTPH------AYNPVIQALFRRKRSKEAVRLFREMIEKAEAP 649
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEG-KINEAVAAVRNMEQRGVVGTASVYYELA 403
A TY K++ R + G I EAV V M +RG V S +Y LA
Sbjct: 650 DAVTY------------KIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLA 694
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 152/383 (39%), Gaps = 91/383 (23%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
+L++LG+A +P A +F+ + ++ + Y+S+ + G + +L+ RM+ +
Sbjct: 86 MLSVLGRANQPGLAQELFDR--AESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDR 143
Query: 294 PSKR--------IKNMHRKN-------------WDPVLEPDLVVYNAVLNACVPSHQWKG 332
+ IK R + L PD + YN +++AC +++
Sbjct: 144 GCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSD 203
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+F+++++ G P TY + Y R G++ A + R M+++G
Sbjct: 204 AILIFEEMQRQGCDPDIWTYNAMISVYGRA------------GRVEAASSIFRIMQEQGF 251
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR------------------------HS 428
A Y + +GR ++ VE+I+ + H
Sbjct: 252 TPDAVTYNSVLHAFARDGRIEE----VERIRGMMRDARCSSDEITYNTMIHMYGKAGMHR 307
Query: 429 K--------------PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 473
K P +TFT LI + G +++ ++F+ M K P + +AM+
Sbjct: 308 KAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMI 367
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
Y++ DMFS A+ + RA ++PD YS ML+ A E
Sbjct: 368 CAYAKADMFSDAEHTYSCMLRAG-------------VRPDLLAYSVMLDVFFKAEMPEKC 414
Query: 534 EYVYKGMALSGCQLDQTKHAWLL 556
+YK M SG + + + +A ++
Sbjct: 415 IILYKAMVGSGLKPELSVYAIMV 437
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 141/348 (40%), Gaps = 65/348 (18%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L+P+ N VL A + + K + +++L + G+ P++ T+ V+
Sbjct: 701 LQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTF------------VVIFH 748
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
AF G + EA + R M + G + V+ L DA +V+ IK
Sbjct: 749 AFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLEL 808
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
++I + + S G + + +F+ M++ C P+ T N ++ +YSRN M +A+ L
Sbjct: 809 DMDIYNHMISLYSKLGSYRKAAL-VFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQAL 867
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
E + ++ P+ TY++++ A +E E V+K +A +GC+ D
Sbjct: 868 LREMIKTGNA-------------PNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPD 914
Query: 549 QTKHAWLLVEASRAGK----------------------CHLL-------------EHAFD 573
T + ++ +AG+ H+L E +
Sbjct: 915 ATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLE 974
Query: 574 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA---PFHIT 618
+L E G P + +T ++ + +Y AV + M A P H+T
Sbjct: 975 TLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDACVRPTHVT 1022
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 14/164 (8%)
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
+P IT+ LI + + D I IF+ M + C+P+I T NAM+ VY R A
Sbjct: 182 RPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASS 241
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
+F G+T PD TY+S+L A A + E E + M + C
Sbjct: 242 IFRIM---QEQGFT----------PDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSS 288
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
D+ + ++ +AG E + + E G P + FT ++
Sbjct: 289 DEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLI 332
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 107/263 (40%), Gaps = 27/263 (10%)
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
W+ VF+ L++ G + + Y L+ A+ E G A A+ NM
Sbjct: 651 WQNAEIVFRDLQRHGFAGNTSAY------------SALLSAYAETGNFERATRALDNMVA 698
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
G+ A+ + G+ ++ +++ + + P TF + + G+++
Sbjct: 699 AGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGIT-PNSRTFVVIFHAFSRNGNLE 757
Query: 450 DCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
+ S+++ M++ P+I A+L +YSR + A+EL ++ +A
Sbjct: 758 EARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAG------------ 805
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
L+ D Y+ M+ + + V+KGM GC D T L++ SR
Sbjct: 806 -LELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEA 864
Query: 569 EHAFDSLLEAGEIPHPLFFTEML 591
+ +++ G P+ +T ++
Sbjct: 865 QALLREMIKTGNAPNISTYTTLI 887
Score = 46.6 bits (109), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 95/498 (19%), Positives = 181/498 (36%), Gaps = 108/498 (21%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
++D R Y ++ + GKAG +A ++ M E+ PD + + TLG+ G
Sbjct: 281 MRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRC-PDSVTFTVLIDTLGKAG 339
Query: 279 LLKELVKLIERMRQ---KPSKRI-----------------KNMHRKNWDPVLEPDLVVYN 318
+ E + E M + +P+ + ++ + + PDL+ Y+
Sbjct: 340 FVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYS 399
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR----------------- 361
+L+ + + ++K + SGLKP + Y + + + +
Sbjct: 400 VMLDVFFKAEMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSLAEIENLSKEMVQS 459
Query: 362 ---------------------CLLKV---------------LVRAFWEEGKINEA---VA 382
+LK+ ++ AF GK+++A V
Sbjct: 460 SASLAALSSTLAKGGFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEASGKLSDARDLVH 519
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT-FTGLIIS 441
AV ++E A +Y LA L GR+ +A E++++ + +++ F ++++
Sbjct: 520 AVSSIEPS---VAAHLYKRLALMLAKAGRFSEAE---EEMRTSQTYGQAQVSDFLKVLVA 573
Query: 442 SMD-GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA---- 495
S D G D+ ++ F M + E + + + Y R A EL + A
Sbjct: 574 SYDRAGMQDEALARFLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFEVK 633
Query: 496 NSSGYTFLSGDGAPLK------------------PDEYTYSSMLEASATAHQWEYFEYVY 537
+S+ + + LK + YS++L A A +E
Sbjct: 634 DSAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRAL 693
Query: 538 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 597
M +G Q + ++L RAGK L + L E G P+ F +
Sbjct: 694 DNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRN 753
Query: 598 SNYEKAVALINAMAYAPF 615
N E+A ++ M A F
Sbjct: 754 GNLEEARSMYRQMREAGF 771
>gi|357455845|ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487251|gb|AES68454.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 503
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 162/404 (40%), Gaps = 66/404 (16%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
++ +L+D +S+ + + M+Q L T L+K L RQA+ +
Sbjct: 96 QSYNLLIDIVSKVHQFDLASQLIVEMDQINLPPTPTTFFILIKRLISANLTRQAVRAFNE 155
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY-PDIAAYHSVAVTL 274
+ D + F Y LL L K G A +FN + N + D+ Y +
Sbjct: 156 IESYTDTKLTSDHFTY--LLDTLCKYGYVKHACELFN---RNSNRFVADVKMYTVLIYGW 210
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV------PSH 328
++G K + + M+ K +EP++V YN +LN P
Sbjct: 211 CKIGRFKTALSFLNEMKVKG---------------VEPNVVTYNVILNGICRKASLHPEE 255
Query: 329 QWKGVFW----VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAV 384
+++ VF ++R+SG++P ++ + + Y R LV + +
Sbjct: 256 RFERTIRDAEKVFDEMRESGIEPDVTSFSIVLHVYSRAHKPQLV------------LDKL 303
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSM 443
M+++G+ Y + CLC+ GR ++A +++++ +R+ P T+
Sbjct: 304 GLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEM--VRNGVSPCAATYNCFFKEYR 361
Query: 444 DGGHIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
D + F+ MK+ CEP T ++ ++ + DM KE++ +
Sbjct: 362 GRKDADKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMME------- 414
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQW----EYF-EYVYKGM 540
SG G PD +Y+ ++ + +W +YF E + KG
Sbjct: 415 --SGVG----PDLDSYTVLIHGLCESKKWREACQYFVEMIEKGF 452
>gi|298707411|emb|CBJ30040.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 564
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/402 (17%), Positives = 154/402 (38%), Gaps = 92/402 (22%)
Query: 192 QMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
++++ LK G KG W++A++ + ++ + + Y+ L++ + ++GR E L +
Sbjct: 36 KLIQTLKSQGRKGQWKEALTAANLA---REDGVVFDVYTYSVLMSAVARSGRWEEVLVLL 92
Query: 252 NLM------------------------------------------LEDCNLYPDIAAYHS 269
++M + L P++ + S
Sbjct: 93 DVMRSEGVAPDHFAFGAAVNACAKGGQWERAVALLDQRALRLLGEMAAVGLSPNVTTFSS 152
Query: 270 VAVTLGQVGLLKELVKLIERMRQKP--------SKRIKNMHRKN-WDPVLE--------- 311
G G + + L+++M ++ S + + W P L
Sbjct: 153 AVAACGNAGQWERALGLLDQMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRMRAAN 212
Query: 312 --PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
P++ Y A ++AC + +W+ + ++R+ G+ P+ T+ A +
Sbjct: 213 CPPNVQTYTAAIDACGKAGEWRLAQGLLAEMREKGVAPNVITFNSA------------IS 260
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
A G+ EA+ +R+M GV Y +N RW A+ V E+++S R +
Sbjct: 261 ALGNGGQWQEALNLLRDMPSMGVQPNMWSYTAAVTACGDNNRWARALAVHEQMRS-RGIR 319
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
E++FT I + GG + +++ M+D P + + + + + + +A L
Sbjct: 320 GDEVSFTAAIDACAQGGAWEMALALLDEMRDEGIPPTVRSFSTAISACGKGQQWGRAVAL 379
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
E S P+E ++++ ++A A QW
Sbjct: 380 LREMEEVGVS-------------PNEVSFNAAIDACGRAGQW 408
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 148/355 (41%), Gaps = 42/355 (11%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M + G+ E + G G WR A+++L + ++++ YT + GK
Sbjct: 173 MAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRMRAANCPPNVQT---YTAAIDACGK 229
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
AG A + M E + P++ ++S LG G +E + L +R PS +
Sbjct: 230 AGEWRLAQGLLAEMREK-GVAPNVITFNSAISALGNGGQWQEALNL---LRDMPSMGV-- 283
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+P++ Y A + AC +++W V +Q+R G++ ++ A++
Sbjct: 284 ----------QPNMWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFTAAID--- 330
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR-WQDAMLVV 419
A + G A+A + M G+ T + A C G+ W A+ ++
Sbjct: 331 ---------ACAQGGAWEMALALLDEMRDEGIPPTVR-SFSTAISACGKGQQWGRAVALL 380
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV--NAMLKVYS 477
+++ + S P E++F I + G +S+ M P GT+ NA++
Sbjct: 381 REMEEVGVS-PNEVSFNAAIDACGRAGQWRAALSLLDKMSSAGVPR-GTITYNAVIAACG 438
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK-PDEYTYSSMLEASATAHQWE 531
+ +++A + E +G GD AP+ D +YS+ ++A A +WE
Sbjct: 439 KGKEWARAVSVLREML----AGQAKTDGDMAPVPMADVVSYSAAIDACVRAGEWE 489
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/260 (18%), Positives = 106/260 (40%), Gaps = 23/260 (8%)
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
RR L +++ +G+ EA+ A + GVV Y L + +GRW++ ++++
Sbjct: 33 RRSKLIQTLKSQGRKGQWKEALTAANLAREDGVVFDVYTYSVLMSAVARSGRWEEVLVLL 92
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF---------QHMKDHCEPNIGTVN 470
+ ++S P F + + GG + +++ + PN+ T +
Sbjct: 93 DVMRS-EGVAPDHFAFGAAVNACAKGGQWERAVALLDQRALRLLGEMAAVGLSPNVTTFS 151
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
+ + + +A L ++ ++ +G P P+E+T+S+ + A A QW
Sbjct: 152 SAVAACGNAGQWERALGLLDQ-----------MAEEGVP--PNEFTFSAAVSACGKAGQW 198
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
+ + M + C + + + +AG+ L + + E G P+ + F
Sbjct: 199 RPALTILRRMRAANCPPNVQTYTAAIDACGKAGEWRLAQGLLAEMREKGVAPNVITFNSA 258
Query: 591 LIQAIVQSNYEKAVALINAM 610
+ +++A+ L+ M
Sbjct: 259 ISALGNGGQWQEALNLLRDM 278
>gi|125572530|gb|EAZ14045.1| hypothetical protein OsJ_03970 [Oryza sativa Japonica Group]
Length = 665
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 158/375 (42%), Gaps = 47/375 (12%)
Query: 237 ILGKAGRPHEALRIFNLMLE--DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+L A RP L+LE D + PD +Y ++ L + G L + + M
Sbjct: 134 LLRSACRPGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPLME--- 190
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR-KSGLKPSAATYG 353
D + PDLV+++ +++ + +F +LR +G+KP Y
Sbjct: 191 ------------DDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYN 238
Query: 354 LAMESYRRC-LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
A+ +Y + LL+ R + +M GV A Y + L GR
Sbjct: 239 AAIAAYCKSDLLRDANRLL------------LHDMPSDGVAPDAESYSPILAALARRGRH 286
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID---DCISIFQHMK-DHCEPNIGT 468
A+ + ++++ KP +++ +++++ G +D + +F M+ P++ T
Sbjct: 287 LAAVSLFTHMRAVARVKP-DLSVFNIVLNAY--GQLDLAREADRLFWSMRRAGVAPSVVT 343
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
N ML+VY +F +A LF A S G G+ +KP+ TY++M+ +
Sbjct: 344 YNTMLRVYGDAGLFGEAVHLFGLMRSAASDGS---DRGGSVIKPNVVTYNTMIAIYGKSL 400
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ E + + M +G Q + ++ +L +AGK F+ L EAG P+ +
Sbjct: 401 EDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQ 460
Query: 589 EMLIQAIVQSNYEKA 603
M++ YE+A
Sbjct: 461 TMVVA------YERA 469
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 95/496 (19%), Positives = 190/496 (38%), Gaps = 88/496 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L G A++ L ++D +++ L+ + + G +AL +F+ +
Sbjct: 169 LLAALTRAGHLDHALTFLPL---MEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLR 225
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL----- 310
+ PD+ AY++ + LL++ +L+ + PS + +++ P+L
Sbjct: 226 GAAGIKPDLKAYNAAIAAYCKSDLLRDANRLL--LHDMPSDGVAP-DAESYSPILAALAR 282
Query: 311 --------------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+PDL V+N VLNA + +F +R++G+ PS
Sbjct: 283 RGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVV 342
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAV-------AAVRNMEQRG--VVGTASVYYE 401
TY ++R + + G EAV +A + RG V+ V Y
Sbjct: 343 TY------------NTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPNVVTYN 390
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHS------KPLEITFTGLIISSMDGGHIDDCISIF 455
+ L EK SL +P IT++ ++ + G +D +F
Sbjct: 391 TMIAIYGKS------LEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLF 444
Query: 456 QHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 514
+ +++ E + M+ Y R + S++K L + + ++
Sbjct: 445 EKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDS-----------------ED 487
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 574
+ ++ A A + E ++++ A +G D + + ++ +++ + + FD
Sbjct: 488 VPKETAIKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDE 547
Query: 575 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER---QWTELFESNED 631
+ +AG +P + ++KA AL AM ++R Q L + +D
Sbjct: 548 MRKAGSLPDSETIAITMNAHGKLKEFDKAAALYRAMREEGCVFSDRVHFQMVSLLGAQKD 607
Query: 632 RISRDKLEKLLNALCN 647
D LE LL L +
Sbjct: 608 ---FDALEALLGELSD 620
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 155/391 (39%), Gaps = 51/391 (13%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
R +A+ + + M+E PD + ++ L E V L++RM Q+
Sbjct: 94 RISDAVALVDQMVE-MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC------- 145
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES---Y 359
+P+LV Y V+N F + ++ + ++ + ++S Y
Sbjct: 146 --------QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 197
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLV 418
R +++A+ + ME +G+ Y L CLC+ GRW DA L+
Sbjct: 198 RH---------------VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 242
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 477
+ I+ + P +TF LI + + G + + M K +P+I T N+++ +
Sbjct: 243 SDMIE--KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 300
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+D KAK++FE + PD TY+++++ + + E ++
Sbjct: 301 MHDRLDKAKQMFEFMVSKDCF-------------PDLDTYNTLIKGFCKSKRVEDGTELF 347
Query: 538 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 597
+ M+ G D + L+ G C + F ++ G P + ++ +L
Sbjct: 348 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 407
Query: 598 SNYEKAVALINAMAYAPFHITERQWTELFES 628
EKA+ + + M + + +T + E
Sbjct: 408 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 438
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 34/207 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L G A ++F M+ D + PDI Y + L G L++ +++ + M
Sbjct: 362 YTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 420
Query: 291 RQKPSK--------RIKNMHR-----KNWDPV-------LEPDLVVYNAVLNACVPSHQW 330
++ K I+ M + WD ++P++V YN +++
Sbjct: 421 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 480
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
+ + + K++++ G P + TY L+RA +G + +R M
Sbjct: 481 QEAYALLKKMKEDGPLPDSGTY------------NTLIRAHLRDGDKAASAELIREMRSC 528
Query: 391 GVVGTASVYYELACCLCNNGRWQDAML 417
VG AS L + ++GR + L
Sbjct: 529 RFVGDAST-IGLVANMLHDGRLDKSFL 554
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 170/417 (40%), Gaps = 64/417 (15%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
R ++SR TKL+ I+ + GRP E I + ++E + P + Y ++ L
Sbjct: 70 RTVRSR---TKLMNIMIEKGRPQEVQSILDSIIEGGH-KPSLVTYTTLLAALTIQKHFDS 125
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
+ +I ++ + +EPD + +NAV+NA S + F ++++
Sbjct: 126 IHSIISQVEENG---------------MEPDSIFFNAVINAFSESGNMQEAMKYFWKMKE 170
Query: 343 SGLKPSAAT-------YGLAMESYRRCLL-----------------KVLVRAFWEEGKIN 378
SG KP+ +T YG+A E L VLVRA+ + I
Sbjct: 171 SGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIM 230
Query: 379 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
+A V M G+ A Y +A NG A ++ ++++ + +P E T +
Sbjct: 231 KAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQN-SNVQPNERTCCII 289
Query: 439 IISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVY---SRNDMFSKAKELFEETTR 494
I G I + + MKD +PN+ N+++K + D ++ L EE
Sbjct: 290 IGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFG- 348
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
+KPD T+S+++ A + A + ++ M + Q D ++
Sbjct: 349 ---------------VKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSI 393
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
L RAG+ E ++++++G P+ + FT ++ E A+ + M
Sbjct: 394 LAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMC 450
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 143/385 (37%), Gaps = 80/385 (20%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ SE + K+ M +SG T L+KG
Sbjct: 148 VINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGY-------------------- 187
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
G AG P E+ ++ LM +D N+ P++ Y+
Sbjct: 188 ------------------GIAGEPEESQKLLELMSQDENVRPNLRTYN------------ 217
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
V + +K + N+ K L+PD V YN + A + + + ++
Sbjct: 218 ---VLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEM 274
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
+ S ++P+ R C +++ + +EGKI EA+ V M+ G+ V+
Sbjct: 275 QNSNVQPNE----------RTCC--IIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFN 322
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-K 459
L + +D + V + KP ITF+ ++ + G +D C IF M K
Sbjct: 323 SLIKGFI-DAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVK 381
Query: 460 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
+P+ + + K Y R KA+E+ + SG+ P+ +++
Sbjct: 382 ARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIK---SGF----------HPNVVIFTT 428
Query: 520 MLEASATAHQWEYFEYVYKGMALSG 544
++ +A + EY +++ M G
Sbjct: 429 IINGWCSAGRMEYAIKIFEKMCECG 453
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 155/402 (38%), Gaps = 48/402 (11%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+L+ L + GRP +A R+ +E C Y ++A +VG L E ++++ M
Sbjct: 93 RLVRDLCRRGRPADAARV----VEACGSAATAVTYSALADGYCRVGRLDEARRVVDGMPV 148
Query: 293 KPSKRIKN--MHRKN-----------WDPVL----EPDLVVYNAVLNACVPSHQWKGVFW 335
PS N MH D +L PD+V YN +L A ++
Sbjct: 149 LPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAME 208
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+ +R G P+ TY + M+ R EG ++ A + ++ G
Sbjct: 209 LIDLMRVEGCTPTNVTYNVIMDGMCR------------EGDVDYARELLNSLPSYGCTPN 256
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
Y + L GRW+D ++ ++ S + P E T + +I S G I +
Sbjct: 257 TVNYNTVLKGLRTAGRWEDVEELIAEMFS-ENCPPSEATLSVVISSLCQEGLFQRAIRLL 315
Query: 456 QHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 514
+ M H C NI T NA++ A L + DG KP+
Sbjct: 316 EKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSN-----------MQTDGC--KPNI 362
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 574
+TY+ +++ A +WE E + M+ + C D ++ + G F
Sbjct: 363 FTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQ 422
Query: 575 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 616
+ E G P+ + ++ ++ E+++ L+N M F+
Sbjct: 423 MPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFN 464
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 113/287 (39%), Gaps = 49/287 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+LKGL G W ++ ++ + S + +++ L + G A+R+ M
Sbjct: 263 VLKGLRTAGRWEDVEELIAEMF---SENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMS 319
Query: 256 E-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKN------ 305
+ DC +I Y++V L + G + + L+ M+ KP+ N+ K
Sbjct: 320 KHDCT--ANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAER 377
Query: 306 WDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
W+ + PD++ +N ++ VFKQ+ + G P++ TY
Sbjct: 378 WEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSS 437
Query: 355 AMESYRRC--------LLK--------------VLVRAFWEEGKINEAVAAVRNMEQRGV 392
+E + LL +L EE K+ EA+ V ++ G+
Sbjct: 438 VIEGLAKTGKMEQSLELLNEMGSKGFNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGI 497
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
A +Y + LC NG+ A+ ++ + S P E T++ LI
Sbjct: 498 SPQAVLYNTILLGLCRNGKTDQAIDILSNMVS-DGCMPDESTYSILI 543
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/448 (19%), Positives = 174/448 (38%), Gaps = 65/448 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++GL G + A+ V G K D+ + L+ L K+GR EA +IF M
Sbjct: 71 VIRGLCKAGRFGDALGYFKTVAGTKCTPDI---ITFNILVDALVKSGRVEEAFQIFESMH 127
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ----------------------- 292
P++ Y +V L + G L ++L++ M +
Sbjct: 128 TSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRT 187
Query: 293 -KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K ++ M R+ + +PD+++YN +LN S + + + + +SG P+ T
Sbjct: 188 DKGFTLLQEMTRRGF----QPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVT 243
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y ME F +++ A ++ M +RG Y + LC + R
Sbjct: 244 YNSLME------------LFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDAR 291
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID------DCISIFQHMKD-HCEP 464
DA +++++ + R P IT++ +I +D I + MK C P
Sbjct: 292 LDDAQALLKQMVAAR-CVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPP 350
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
N GT +++ R +A L + + PD ++S ++ +
Sbjct: 351 NAGTYAVVIEGLCRARKSQQALALLRRMIDSE-------------VVPDLSSFSMVIGSL 397
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
+H + ++ M+ C+ + +A L+ S+ G+ F+ ++E+ P
Sbjct: 398 CKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFR-PGV 456
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAMAY 612
+ +L E+AV ++ M +
Sbjct: 457 ATYNSVLDGLCGVGRIEEAVRMVEGMIH 484
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/340 (18%), Positives = 141/340 (41%), Gaps = 44/340 (12%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+++R + + F Y L+ L KAG+ +A + + M D + P +A ++ V L + G
Sbjct: 21 FREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEM-RDRGIPPGVAVHNGVIRGLCKAG 79
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ + + + PD++ +N +++A V S + + F +F+
Sbjct: 80 RFGDALGYFKTVAGTKCT---------------PDIITFNILVDALVKSGRVEEAFQIFE 124
Query: 339 QLRKSG-LKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
+ S P+ TY ++ ++GK++ A+ + M + G
Sbjct: 125 SMHTSSQCLPNVVTY------------TTVINGLCKDGKLDRAIELLDLMNETGCCPNVI 172
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y L LC GR +++++ + R +P I + L+ +D+ + + Q
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEM-TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQL 231
Query: 458 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
M + C P + T N++++++ R+ +A L + +S G P PD
Sbjct: 232 MIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQ-----------VMSERGCP--PDVIN 278
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
Y++++ + + + + K M + C D ++ ++
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTII 318
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 153/400 (38%), Gaps = 73/400 (18%)
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILG 239
+MN++G L++GL G + ++L + + D+ +Y LL L
Sbjct: 161 LMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV---IMYNTLLNGLC 217
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK--PSKR 297
K+ R EAL + LM+ YP + Y+S+ + + +LI+ M ++ P
Sbjct: 218 KSRRLDEALELVQLMIRS-GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDV 276
Query: 298 IKNMHRKNWDPVLE------------------------PDLVVYNAVLNACVPS----HQ 329
I N++ V+ PD++ Y+ +++
Sbjct: 277 I------NYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDAD 330
Query: 330 WK--GVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
WK + + ++++G P+A TY + +E L RA K +A+A +R M
Sbjct: 331 WKLEAACEILEMMKQTGCPPNAGTYAVVIEG--------LCRAR----KSQQALALLRRM 378
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
VV S + + LC + DA + + S R KP + + LI GG
Sbjct: 379 IDSEVVPDLSSFSMVIGSLCKSHDL-DAAYKIFGMMSERECKPNPVAYAALIDGLSKGGE 437
Query: 448 IDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
+D + +F+ M + P + T N++L +A + E
Sbjct: 438 VDKAVRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECF--------- 488
Query: 508 APLKPDEYTYSSMLEA----SATAHQWEYFEYV-YKGMAL 542
PD +Y +++ S +E F+ V KG A+
Sbjct: 489 ----PDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAM 524
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 99/241 (41%), Gaps = 31/241 (12%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N LN V + Q +F++ R P+ TYG L+ + GK+
Sbjct: 2 NCALNLLVRAGQHGQAVQLFREER---CVPNEFTYG------------SLIHGLCKAGKL 46
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
++A + M RG+ +V+ + LC GR+ DA+ + + + + P ITF
Sbjct: 47 DQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCT-PDIITFNI 105
Query: 438 LIISSMDGGHIDDCISIFQ--HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
L+ + + G +++ IF+ H C PN+ T ++ ++ +A EL +
Sbjct: 106 LVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLD---LM 162
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
N +G P+ TYS ++E A + + + + M G Q D + L
Sbjct: 163 NETGCC----------PNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212
Query: 556 L 556
L
Sbjct: 213 L 213
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 106/270 (39%), Gaps = 42/270 (15%)
Query: 161 LVDRLSEREMTAKNWKF------VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
++D L + +WK + +M Q+G G +++GL +QA+++L
Sbjct: 317 IIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLR 376
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVT 273
+ + DL S ++ ++ L K+ A +IF +M E +C P+ AY ++
Sbjct: 377 RMIDSEVVPDLSS---FSMVIGSLCKSHDLDAAYKIFGMMSERECK--PNPVAYAALIDG 431
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKG 332
L + G + + V++ E M + P + YN+VL+ C +
Sbjct: 432 LSKGGEVDKAVRVFELMVES----------------FRPGVATYNSVLDGLCGVGRIEEA 475
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
V V + K P A+YG L+R + EA + +E +G
Sbjct: 476 VRMVEGMIHKECF-PDGASYG------------ALIRGLCRVSCVEEAYELFQAVEAKGF 522
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKI 422
VY L LC R DA V K+
Sbjct: 523 AMEVGVYNVLVNELCKKKRLSDAHGVANKL 552
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 185/459 (40%), Gaps = 58/459 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLM---FTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
VL+ L + + F + M GL+ FT G L+ GL +A ++LD +
Sbjct: 157 VLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGA---LINGLCKSRRSNEAKALLDEM 213
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
+ K ++ VY L+ + G EA ++ M+ + P+ Y ++ L +
Sbjct: 214 SCAELKPNV---VVYANLIDGFMREGNADEAFKMIKEMVA-AGVQPNKITYDNLVRGLCK 269
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
+G + L+++M +++ HR PD + YN ++ H K F +
Sbjct: 270 MGQMDRASLLLKQM-------VRDSHR--------PDTITYNLIIEGHFRHHNKKDAFRL 314
Query: 337 FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
++ +G+ P+ TY +++ + G+ +A + M +G+ A
Sbjct: 315 LSEMENAGISPNVYTY------------SIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 362
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
VY L C G A + +K+ + + P + LI G +++ F
Sbjct: 363 FVYAPLISGYCREGNVSLACEIFDKMTKV-NVLPDLYCYNSLIFGLSKVGRVEESTKYFA 421
Query: 457 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
M++ PN T + ++ Y +N A++L + R +G LKP++
Sbjct: 422 QMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ---RMLDTG----------LKPNDV 468
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
Y +LE+ + E +K M G LD + L+ S +G +E AF L
Sbjct: 469 IYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN---MEAAFRVL 525
Query: 576 LEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
E G +P ++ ++ ++ EKA +++ M+
Sbjct: 526 SEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 564
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 152/371 (40%), Gaps = 50/371 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
++ GL G +A +L+ + GLK + FVY L++ + G A IF+
Sbjct: 333 MIHGLCQSGEPEKASDLLEEMTTKGLK-----PNAFVYAPLISGYCREGNVSLACEIFDK 387
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M + N+ PD+ Y+S+ L +VG ++E K +M+++ L P+
Sbjct: 388 MTK-VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG---------------LLPN 431
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
Y+ +++ + + + + +++ +GLKP+ Y +ESY ++
Sbjct: 432 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY------------FK 479
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
I + + ++M +GV+ +Y L L ++G + A V+ +I+ S P
Sbjct: 480 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEK-NGSVPDVH 538
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
++ LI + I M K +PNI NA++ ++ S A+ +F
Sbjct: 539 VYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI 598
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
L P+ TY+S+++ S Y+Y M +G D +
Sbjct: 599 LAKG-------------LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVY 645
Query: 553 AWLLVEASRAG 563
+ L S AG
Sbjct: 646 SVLTTGCSSAG 656
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/366 (19%), Positives = 141/366 (38%), Gaps = 52/366 (14%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
K+GR +A + LM+ D L P I ++ LLK+L +R +
Sbjct: 59 KSGRVQDAAEVV-LMMRDRGLAPSIRCCNA---------LLKDL------LRADAMALLW 102
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+ + PD+ Y+ ++ A ++ V ++R+ G + TY
Sbjct: 103 KVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTY------- 155
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
VL+ G + EA ++ME G+V Y L LC + R +A ++
Sbjct: 156 -----NVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 210
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 478
+++ S KP + + LI M G+ D+ + + M +PN T + +++ +
Sbjct: 211 DEM-SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 269
Query: 479 NDMFSKA----KELFEETTRANSSGYTFL------------------SGDGAPLKPDEYT 516
+A K++ ++ R ++ Y + + A + P+ YT
Sbjct: 270 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYT 329
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
YS M+ + + E + + M G + + +A L+ R G L FD +
Sbjct: 330 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 389
Query: 577 EAGEIP 582
+ +P
Sbjct: 390 KVNVLP 395
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 125/351 (35%), Gaps = 41/351 (11%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY---RR---------- 361
V YN ++ S + F K + GL P TYG + RR
Sbjct: 153 VTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDE 212
Query: 362 ----------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
+ L+ F EG +EA ++ M GV Y L LC G+
Sbjct: 213 MSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQ 272
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 470
A L+++++ H +P IT+ +I + D + M++ PN+ T +
Sbjct: 273 MDRASLLLKQMVRDSH-RPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYS 331
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
M+ ++ KA +L EE T LKP+ + Y+ ++
Sbjct: 332 IMIHGLCQSGEPEKASDLLEEMTTKG-------------LKPNAFVYAPLISGYCREGNV 378
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
++ M D + L+ S+ G+ F + E G +P+ ++ +
Sbjct: 379 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 438
Query: 591 LIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKL 641
+ + + E A L+ M + + +L ES D +EK+
Sbjct: 439 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES---YFKSDDIEKV 486
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 95/224 (42%), Gaps = 22/224 (9%)
Query: 446 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G + D + M+D P+I NA+LK R D + ++ E F+
Sbjct: 61 GRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVRE-----------FMV 109
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
G G + PD YTYS+++EA +++ + V M GC L+ + L+ R+G
Sbjct: 110 GAG--ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGA 167
Query: 565 CHLLEHAFD---SLLEAGEIPHPLFFTEMLIQAIVQS-NYEKAVALINAMAYAPFHITER 620
+E AF + + G +P F LI + +S +A AL++ M+ A
Sbjct: 168 ---VEEAFGFKKDMEDYGLVPDG-FTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV 223
Query: 621 QWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 664
+ L + + D+ K++ + ++IT NL R L
Sbjct: 224 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGL 267
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 102/269 (37%), Gaps = 31/269 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y L+ L +G A R+ + +E PD+ Y S L+ L K +R
Sbjct: 504 IYGILIHNLSSSGNMEAAFRVLS-EIEKNGSVPDVHVYSS---------LISGLCKTADR 553
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+K + M +K DP ++V YNA+++ S VF + GL P+
Sbjct: 554 --EKAFGILDEMSKKGVDP----NIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 607
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L+ + G I+ A M G+ A VY L +
Sbjct: 608 VTY------------TSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 655
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGT 468
G + AM ++E++ LR + +F L+ G + + + + M PN T
Sbjct: 656 GDLEQAMFLIEEM-FLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALT 713
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANS 497
+ ++ S S+ +F E + S
Sbjct: 714 IENIISGLSEAGKLSEVHTIFVELQQKTS 742
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 141/369 (38%), Gaps = 36/369 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P + YN ++N + +F ++RK GL+P+ ++ L+
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSF------------NTLINGL 268
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ ++E + ME+ + Y L LC GR A + ++++ R +P
Sbjct: 269 CKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQ-RGLRPN 327
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
ITFT LI +D ++ + M +P++ N +L + +KA++L +
Sbjct: 328 GITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E +KPD+ TY+++++ E + KGM G LD
Sbjct: 388 EMKMVG-------------MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV 434
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L+ R G+ E ++EAG P +T ++ + N + L+ M
Sbjct: 435 AFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494
Query: 611 ---AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHAL 667
+ P IT + L + LL A+ N +IT + L L
Sbjct: 495 QINGHKPGVIT---YNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNIL---LEGH 548
Query: 668 CRSEKERDL 676
C++ K DL
Sbjct: 549 CKNGKAEDL 557
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 148/385 (38%), Gaps = 53/385 (13%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D++ W F + + G L+ +GS R A + + +
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEI---- 249
Query: 221 DKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
KR L+ V + L+ L K+ E R+ M E+ +YPD+ Y + L + G
Sbjct: 250 RKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTM-EENRIYPDVFTYSVLIHGLCKEGR 308
Query: 280 LKELVKLIERMRQKP-----------------SKRIK---NMHRKNWDPVLEPDLVVYNA 319
L +L + M+Q+ S+R+ N + + ++PDLV+YN
Sbjct: 309 LDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNT 368
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
+LN + +++ G+KP TY L+ + +EG +
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMKMVGMKPDKITY------------TTLIDGYCKEGDLES 416
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
A+ + M + GVV + L C +GR +DA + ++ KP + T+T +I
Sbjct: 417 AMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVE-AGMKPDDATYTMVI 475
Query: 440 ISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
G++ + + M+ + +P + T N ++ + A L E
Sbjct: 476 DGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLG-- 533
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEA 523
+ PD+ TY+ +LE
Sbjct: 534 -----------VTPDDITYNILLEG 547
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 80/200 (40%), Gaps = 19/200 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
L++ L + K K V M G+ + L+ G +G AM + G+
Sbjct: 368 TLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRK---GM 424
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
++ + +T L++ + GR +A R M+E + PD A Y V + G
Sbjct: 425 NEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVE-AGMKPDDATYTMVIDGYCKKGN 483
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+K KL++ M+ N H+ P ++ YN ++N Q K + +
Sbjct: 484 VKMGFKLLKEMQI-------NGHK--------PGVITYNVLMNGLCKQGQMKNANMLLEA 528
Query: 340 LRKSGLKPSAATYGLAMESY 359
+ G+ P TY + +E +
Sbjct: 529 MLNLGVTPDDITYNILLEGH 548
>gi|242050640|ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
gi|241926441|gb|EER99585.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
Length = 558
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 165/385 (42%), Gaps = 50/385 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLM 254
L++ + GS + A+ V W +K + + +R +Y ++ + + + +A +F
Sbjct: 123 LIREITISGSLKHAVHVFRW---MKIQENYCARNDIYGMMIRLHARHNQVDQARGLF-FE 178
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+++ PD Y+S+ + G + + +++ M++ + P
Sbjct: 179 MQEWRCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQRA---------------AIPPSR 223
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
YN V+NAC + WK + K++ ++G+ P T+ +++ AF
Sbjct: 224 TTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITH------------NIVLSAFKNG 271
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE-I 433
+ ++A+A M+ V + CL + +A+ + ++ R P + +
Sbjct: 272 AQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKVALYGEAIELFNSMRERRTICPPDVV 331
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T+T ++ S G ++C ++F M + PNI + NA+L Y+ + M ++A E F+
Sbjct: 332 TYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNIVSYNALLGAYASHGMHTEALETFK-- 389
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
L +G KPD +Y+S+L A + E V+ M + C+ ++ +
Sbjct: 390 ---------LLKQNG--FKPDIVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPNKVSY 438
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLE 577
L+ AG +L+ A L E
Sbjct: 439 NALIDAYGSAG---MLKEAISLLHE 460
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT ++ G+ +F++M+ + + P+I +Y+++ G+ E ++ +
Sbjct: 332 TYTSIMYSYSVCGQAENCKAVFDMMVAE-GVRPNIVSYNALLGAYASHGMHTEALETFKL 390
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
++Q K PD+V Y ++LNA S + VF ++RK+ KP+
Sbjct: 391 LKQNGFK---------------PDIVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPNK 435
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+Y L+ A+ G + EA++ + MEQ G+
Sbjct: 436 VSY------------NALIDAYGSAGMLKEAISLLHEMEQDGI 466
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 112/284 (39%), Gaps = 30/284 (10%)
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
Q +G+F+ ++ R KP TY L+ A G+ A+ + +M+
Sbjct: 171 QARGLFFEMQEWR---CKPDTDTY------------NSLIHAHARAGQWRWAINIMDDMQ 215
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
+ + + + Y + G W+ A+ + +K+ P IT ++ + +G
Sbjct: 216 RAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTE-NGVGPDLITHNIVLSAFKNGAQY 274
Query: 449 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
I+ F+ MK P+ T+N ++ + ++ +A ELF +
Sbjct: 275 SKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKVALYGEAIELFNSMRERRTI--------- 325
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL-VEASRAGKCH 566
PD TY+S++ + + Q E + V+ M G + + + LL AS
Sbjct: 326 --CPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNIVSYNALLGAYASHGMHTE 383
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
LE F L + G P + +T +L + EKA + N M
Sbjct: 384 ALE-TFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEM 426
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 174/440 (39%), Gaps = 86/440 (19%)
Query: 173 KNWKFVRIMNQ---SGLMFTE--GQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
+NW+ V ++ + G MF G L+ G WR+A + +KD + L +
Sbjct: 61 RNWRSVILILEWILQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTF---HLMKDFQCLPT 117
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLE--------DCNLYPDIAAYHSVAVTLGQVGL 279
+ LLA + + +A ++F+ M E + ++ IA Y++ LG+ G
Sbjct: 118 ETSFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGR 177
Query: 280 LKELVKLIERMRQKP--------------------SKRIKNMHRKNWDPVLEPDLVVYNA 319
L + M+++ S + ++ R + P+L Y A
Sbjct: 178 LSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTA 237
Query: 320 VLNA------CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR------------ 361
++NA CV + + +F +L+ G P TY +E+Y R
Sbjct: 238 LMNAHAREGNCVRAEE------IFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQ 291
Query: 362 -----------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+L+ AF G +A A +M++ G T + L G
Sbjct: 292 AMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAG 351
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
+ +A +V +I++ KP F L+ + + G ID+ S+ + M +P+I T+
Sbjct: 352 KVTEAERLVREIEN-SGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTL 410
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
N ++ Y++ KA+E+F S + L PD +++S++ A A
Sbjct: 411 NTLINAYAQGGYIEKAEEVFN-------------SLESKGLTPDVMSWTSLMGAYAQRKL 457
Query: 530 WEYFEYVYKGMALSGCQLDQ 549
+ +++ M +GC D+
Sbjct: 458 FRKCVSIFQKMVKAGCIPDR 477
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 132/297 (44%), Gaps = 26/297 (8%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCL-LKVL 367
+ +PD+ +N +++A S QW+ F ++ P+ ++ + + +Y R + L+
Sbjct: 78 MFKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKA 137
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
+ F E + N + V M G+ T + Y E+ L +GR A ++ +
Sbjct: 138 EKLFHEMKESNYSPGTVEWMIFSGI-ATYNTYLEV---LGKSGRLSQAEDTFRDMQK-QG 192
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
P TFT +I + D +F+ M K C PN+ T A++ ++R +A+
Sbjct: 193 ILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAE 252
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
E+F E S G+ PD YTY+++LEA + + V++ M +G +
Sbjct: 253 EIFAEL---QSVGFI----------PDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVR 299
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
DQ + L+ RAG + +DS+ EAG F M ++ S+Y KA
Sbjct: 300 PDQVSYNILIDAFGRAGLTADAQAVYDSMKEAG------FKPTMKSHMLLLSSYAKA 350
>gi|125606474|gb|EAZ45510.1| hypothetical protein OsJ_30168 [Oryza sativa Japonica Group]
Length = 651
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 169/404 (41%), Gaps = 75/404 (18%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
SR +Y LL L AG A+ +F+ M + + PD+ +Y+ + + G + +
Sbjct: 266 SRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMAR 325
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV----FKQLRK 342
+ M+++ L PD V Y ++ H +G F V F+++ +
Sbjct: 326 LSEMQEQAK--------------LTPDKVTYLTLMQC----HYSEGTFPVCIGLFQEMEE 367
Query: 343 SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
G+ + + ++ A ++GK E +A M +RG A++Y L
Sbjct: 368 RGMGNDIPQHAYVL----------VIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTAL 417
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-- 460
+ GR ++AM + E++K +GL + S+ G I +C+ F + +
Sbjct: 418 IDSMGKFGREKEAMALFERMKD-----------SGLKLDSVTYGVIVNCLCRFGKLDEAV 466
Query: 461 ----HCEPNIGTVNA-----MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 511
C+ VNA ++ + + M ++KELFEE + G+
Sbjct: 467 ACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMI---AKGFV---------- 513
Query: 512 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW-LLVEASRAGKCHLLEH 570
PD Y Y+ +++ A + + + +YK M GC DQT + + +L++ K H E
Sbjct: 514 PDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGC--DQTVYTYTILIDGLF--KEHKNEE 569
Query: 571 AF---DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
A D++++ G P F + + + +A +++ +A
Sbjct: 570 ALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRACRILDELA 613
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 101/267 (37%), Gaps = 37/267 (13%)
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+ W +K +R +G++PS Y CLL LV A G ++ AV M
Sbjct: 251 LLWAWKAMRLAGVEPSRLIY--------NCLLDGLVNA----GLLDTAVNVFDAMSTEDQ 298
Query: 393 VGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
V V Y + C GR DAM + +++ P ++T+ L+ G C
Sbjct: 299 VRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVC 358
Query: 452 ISIFQHMKDHCEPN-------IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
I +FQ M++ N + + A+ K + + + + + AN++ YT L
Sbjct: 359 IGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTAL- 417
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
SM + FE M SG +LD + ++ R GK
Sbjct: 418 ------------IDSMGKFGREKEAMALFER----MKDSGLKLDSVTYGVIVNCLCRFGK 461
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEML 591
F S E G + +F+T ++
Sbjct: 462 LDEAVACFRSCQEKGIAVNAIFYTSLI 488
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 174/396 (43%), Gaps = 48/396 (12%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
R ++SR TKL+ +L G+P EA IFN ++++ + P + Y ++ L + L K
Sbjct: 11 RIVRSR---TKLMNVLIGKGKPREAHSIFNSLMDEGH-KPTLITYTTLVAALTRQKLFKS 66
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
+++LI ++ + K PD +++N+++NA S K +F+++++
Sbjct: 67 ILRLISKVEENGMK---------------PDSILFNSIINAFSESGNMKEAMKLFRKMKE 111
Query: 343 SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
SG KP+ +T+ L++ + GK EA+ + ++ GV Y L
Sbjct: 112 SGCKPTTSTF------------NTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNIL 159
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH-IDDCISIFQHMKDH 461
CN ++A +V K+ + +P +T+ L + + G I I + +
Sbjct: 160 VRAWCNKENMEEAWNMVYKMVA-SGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRR 218
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
PN T + ++ Y + E ++S + F + L P+ + ++S++
Sbjct: 219 VTPNERTCSIIVNGYCK------------EGNMVDASRFVFRMKELGVL-PNLFVFNSLI 265
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
+ E + V M +G + D + ++ S AG+ + F+ +++A EI
Sbjct: 266 KGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKA-EI 324
Query: 582 PHPLFFTEMLIQAIVQSNY-EKAVALINAMAYAPFH 616
+ +L + V++ EKA +++ +M H
Sbjct: 325 EPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVH 360
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 131/322 (40%), Gaps = 48/322 (14%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ SE + K R M +SG T L+KG G+ G +A+ +L++ L+
Sbjct: 89 IINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEF---LQ 145
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D ++ Y L+ EA + M+ + PD Y+++A + G
Sbjct: 146 DGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVAS-GMQPDAVTYNTLARAYAEKGET 204
Query: 281 KELVKLIERM---RQKPSKR----IKNMHRKNWDPV-------------LEPDLVVYNAV 320
++I M R P++R I N + K + V + P+L V+N++
Sbjct: 205 IRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSL 264
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR------RC------------ 362
+ + + +GV V + ++G++P T+ M ++ +C
Sbjct: 265 IKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEI 324
Query: 363 -----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
+L + + G+ +A + + +M + GV + + C+ G+ + AM
Sbjct: 325 EPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMK 384
Query: 418 VVEKIKSLRHSKPLEITFTGLI 439
V EK+ + S L+ T+ LI
Sbjct: 385 VYEKMCEIGVSPNLK-TYETLI 405
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 44/244 (18%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+R + Y ++A L KA +A+ + M++ + PD Y+S+ G
Sbjct: 109 DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS-GVMPDCMTYNSIVHGFCSSGQP 167
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
KE + +++MR +EPD+V YN++++ + + +F +
Sbjct: 168 KEAIVFLKKMRSDG---------------VEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 212
Query: 341 RKSGLKPSAATYGLAMESY-----------------------RRCLLKVLVRAFWEEGKI 377
K GLKP TYG ++ Y + +LV A+ ++ K+
Sbjct: 213 TKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKV 272
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI--KSLRHSKPLEITF 435
EA+ M Q+G+ A Y + LC +GR +DAML E++ + LR P I +
Sbjct: 273 EEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLR---PDSIVY 329
Query: 436 TGLI 439
LI
Sbjct: 330 NSLI 333
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 135/351 (38%), Gaps = 64/351 (18%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQVGLL 280
+R + F Y LL L R EAL + ++M +D + PD+ +Y +V + G L
Sbjct: 45 RRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL 104
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+++ D + P++V YN+++ A + V +
Sbjct: 105 DKML----------------------DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 142
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
KSG+ P TY +V F G+ EA+ ++ M GV Y
Sbjct: 143 VKSGVMPDCMTY------------NSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYN 190
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-K 459
L LC NGR +A + + + R KP T+ L+ G + + + M +
Sbjct: 191 SLMDYLCKNGRCTEARKIFDSMTK-RGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVR 249
Query: 460 DHCEPNIGTVNAMLKVYSRND-------MFSKAKE---------------LFEETTRANS 497
+ PN + ++ Y++ + +FSK ++ + ++ R
Sbjct: 250 NGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVED 309
Query: 498 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE-----YFEYVYKGMALS 543
+ F L+PD Y+S++ + +WE + E + +G+ LS
Sbjct: 310 AMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLS 360
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 86/201 (42%), Gaps = 23/201 (11%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--G 218
L+D L + + K M + GL LL+G KG+ + +LD + G
Sbjct: 192 LMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNG 251
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ + +V++ L+ K + EA+ +F+ M + L P+ Y +V L + G
Sbjct: 252 IH-----PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ-GLNPNAVTYGTVIDVLCKSG 305
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+++ + E+M D L PD +VYN+++++ +W+ +F
Sbjct: 306 RVEDAMLYFEQM---------------IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFL 350
Query: 339 QLRKSGLKPSAATYGLAMESY 359
++ G+ S + ++S+
Sbjct: 351 EMLDRGICLSTIFFNSIIDSH 371
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 162/402 (40%), Gaps = 52/402 (12%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
DL+ R T+L I + ++A+ +F+ M++ +P I ++ LL +
Sbjct: 51 DLRERLSKTRLRDI-----KLNDAIDLFSDMVKS-RPFPSIVDFNR---------LLSAI 95
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
VKL K + ++ +K + DL +N V+N Q + ++ K
Sbjct: 96 VKL------KKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKL 149
Query: 344 GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
G +P T G LV F ++++AV+ V M + G Y +
Sbjct: 150 GYEPDRVTIG------------SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAII 197
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHC 462
LC R DA ++I+ + +P +T+T L+ + D + M K
Sbjct: 198 DSLCKTKRVNDAFDFFKEIER-KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 463 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
PN+ T +A+L + +N +AKELFEE R + + PD TYSS++
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS-------------IDPDIVTYSSLIN 303
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ + ++ M GC D + L+ +A + F + + G +
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 583 HPLFFTEMLIQAIVQS-NYEKAVALINAMAYAPFHITERQWT 623
+ + + LIQ Q+ + +KA + M + F I+ WT
Sbjct: 364 NTVTYNT-LIQGFFQAGDVDKAQEFFSQMDF--FGISPDIWT 402
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/350 (19%), Positives = 134/350 (38%), Gaps = 43/350 (12%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
R +A+ + + M+E PDI AY+++ +L + + + + + +K
Sbjct: 170 RVSDAVSLVDKMVE-IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG-------- 220
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
+ P++V Y A++N S +W + + K + P+ TY
Sbjct: 221 -------IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS--------- 264
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
L+ AF + GK+ EA M + + Y L LC + R +A + + +
Sbjct: 265 ---ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM 481
S + +++ LI ++D + +F+ M N T N +++ + +
Sbjct: 322 VS-KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
KA+E F + D + PD +TY+ +L + E +++ M
Sbjct: 381 VDKAQEFFSQM-------------DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
LD + ++ + GK F SL G P + +T M+
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 136/372 (36%), Gaps = 55/372 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G + A+S++D + + K D+ + Y ++ L K R ++A F +
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA---YNAIIDSLCKTKRVNDAFDFFK-EI 216
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + P++ Y ++ L + +L+ M +K + P+++
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK---------------ITPNVI 261
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y+A+L+A V + + +F+++ + + P TY L+
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS------------SLINGLCLHD 309
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+I+EA M +G + Y L C R +D M + ++ S R +T+
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLVSNTVTY 368
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE--- 491
LI G +D F M P+I T N +L N KA +FE+
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 492 -------------------TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
T + + F S LKPD TY++M+ T
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488
Query: 533 FEYVYKGMALSG 544
E +Y M G
Sbjct: 489 VEALYTKMKQEG 500
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 139/334 (41%), Gaps = 52/334 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++ + K G A +F M + L PD Y+S+ G+VG L + V E
Sbjct: 96 FTYNIMIDCMCKEGDVEAARGLFEEM-KFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFE 154
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M+ D EPD++ YNA++N + F++++++GLKP+
Sbjct: 155 EMK---------------DMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPN 199
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
+Y LV AF +EG + +A+ +M + G+V Y L C
Sbjct: 200 VVSY------------STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCK 247
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLII------SSMDGGHIDDCISIFQHMKDHC 462
G DA + ++ + + +T+T LI + +G H+ D + ++
Sbjct: 248 IGNLSDAFRLANEMLQVGVEWNV-VTYTALIDGLCGWENPTEGLHLLD-----EMVELDI 301
Query: 463 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
+ + T ++ +N + SKA + F + N G L+ + Y++M++
Sbjct: 302 KVTVVTFCVLIDGLCKNKLVSKAIDYFGRIS--NDFG----------LQANAAIYTAMID 349
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+Q E +++ MA G D+T + L+
Sbjct: 350 GLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLM 383
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 76/445 (17%), Positives = 162/445 (36%), Gaps = 65/445 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
V+ L ++L G EA++ F+ M + ++P + + GLL + KL
Sbjct: 27 VFDALFSVLIDLGMVEEAIQCFSKM-KRFRVFPKTRSCN---------GLLHKFAKL--- 73
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ +K + +P + YN +++ + +F++++ GL P
Sbjct: 74 ---GKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDT 130
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY ++ F + G++++ V M+ Y L C C
Sbjct: 131 VTY------------NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKF 178
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 468
G+ + ++K KP ++++ L+ + G + I + M+ PN T
Sbjct: 179 GKLPKGLEFFREMKR-NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 237
Query: 469 VNAMLKVYSR----NDMFSKAKELFEETTRANSSGYTFLSGDG----------------- 507
+++ Y + +D F A E+ + N YT L DG
Sbjct: 238 YTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALI-DGLCGWENPTEGLHLLDEM 296
Query: 508 --APLKPDEYTYSSMLEA----SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
+K T+ +++ + +YF + L Q + + ++ +
Sbjct: 297 VELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGL---QANAAIYTAMIDGLCK 353
Query: 562 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQ 621
+ F+ + + G +P +T ++ Q N +A+AL + M +
Sbjct: 354 GNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLA 413
Query: 622 WTELF----ESNEDRISRDKLEKLL 642
+T L N+ + +R LE+++
Sbjct: 414 YTSLVWGLSHCNQLQKARSFLEEMI 438
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 129/304 (42%), Gaps = 33/304 (10%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
EP +V + ++LN + ++F Q+ G KP+ Y ++
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIY------------NTIIDG 195
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ +++ A+ + ME+ G+ Y L LC++GRW DA +V + R P
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK-REIYP 254
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAM---LKVYSRNDMFSKAK 486
TF LI + + G + + ++ M + +P+I T + + L +YSR D +A+
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD---EAE 311
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
E+F F+ G PD TYS ++ + + E+ ++ M+ G
Sbjct: 312 EMF-----------GFMVSKGC--FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
+ + L+ RAGK ++ E F ++ G P+ + + +L EKA+ +
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 607 INAM 610
+ M
Sbjct: 419 LADM 422
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 93/244 (38%), Gaps = 44/244 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDL-KSRFVYTKLLAILGKAGRPHEALRIFNLM 254
L+ GL G W A ++ + KR++ F + L+ K GR EA + M
Sbjct: 227 LISGLCSSGRWSDATRMVSCM----TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ +L PDI Y + L L E ++ M K PD+
Sbjct: 283 IRR-SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGC---------------FPDV 326
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY-------------RR 361
V Y+ ++N S + + +F ++ + G+ + TY + ++ Y RR
Sbjct: 327 VTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 362 CLL----------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
+ VL+ + GKI +A+ + +M++ G+ Y + +C G
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 412 WQDA 415
DA
Sbjct: 447 VADA 450
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 156/403 (38%), Gaps = 55/403 (13%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF---VYTKLLAILGKAGRPHEALRIF 251
+LLKGL D +AM VL L+ ++ R Y LL L R EA +
Sbjct: 124 QLLKGLCDTKRVGEAMHVL-----LRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELL 178
Query: 252 NLML--EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
++M+ +D + PD+ +Y+ V G + + L M
Sbjct: 179 HMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMG------------------ 220
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ PD+V YN +++ + + VF+Q+ + G+KP+ TY ++
Sbjct: 221 VSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTY------------NTIID 268
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+ +++ A + M +GV + Y + LC A V +++ R K
Sbjct: 269 GLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMID-RGVK 327
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P +T+ +I ID +FQ M D +P+ T ++ + +A+ +
Sbjct: 328 PDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGV 387
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F++ +KP+ TY+ ++ + QWE K M+ + D
Sbjct: 388 FQQMIDKG-------------VKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPD 434
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ LL + GKC+ FDS++ G P + ML
Sbjct: 435 VFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIML 477
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/423 (19%), Positives = 154/423 (36%), Gaps = 79/423 (18%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+++D L + + + + M G+ G L+ G G W + + + +
Sbjct: 370 IIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAH 429
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ D+ F Y LL L K G+ +EA +F+ M+ + P + Y + G+ G
Sbjct: 430 DLEPDV---FTYGLLLDYLCKNGKCNEARSLFDSMIRK-GIKPSVTIYGIMLHGYGKKGA 485
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L E+ L+ M + P+ ++N V+ A V +F +
Sbjct: 486 LSEMHDLLNLMVANG---------------ISPNHRIFNTVICAYAKRAMIDEVMHIFIK 530
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+++ GL P+ TYG L+ A + G++++AV M GV V+
Sbjct: 531 MKQQGLSPNVVTYG------------TLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVF 578
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
L LC +W EK++ L LE+ G+
Sbjct: 579 NSLVYGLCTVDKW-------EKVEELF----LEMLNQGI--------------------- 606
Query: 460 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
P+I N +L + +A+ L + LKPD +Y++
Sbjct: 607 ---RPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMG-------------LKPDVISYNT 650
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 579
+++ A + + + GM +G + + + LL +AG+ F +L G
Sbjct: 651 LIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKG 710
Query: 580 EIP 582
P
Sbjct: 711 VTP 713
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 95/226 (42%), Gaps = 31/226 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+ +L L K GR EA R+ + M+ C L PD+ +Y+++ + E VKL++
Sbjct: 613 FNTVLCNLCKEGRVMEARRLIDSMV--CMGLKPDVISYNTLIDGHCFASRMDEAVKLLDG 670
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M L+P++V YN +L+ + + + +F+++ + G+ P
Sbjct: 671 MVSAG---------------LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGV 715
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY ++ + G+ +EA NM + + + Y + C N
Sbjct: 716 ETY------------NTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKN 763
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
+ +A + + + S+ + ITF +I GG +D + +F
Sbjct: 764 NCFDEAFKIFQSLCSMDLQLDI-ITFNIMIDGLFKGGRKEDAMDLF 808
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 75/394 (19%), Positives = 146/394 (37%), Gaps = 60/394 (15%)
Query: 247 ALRIFNLMLEDCN--LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
A+ FN ML DC+ + PD Y V ++G L EL + K R+
Sbjct: 65 AVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRL-ELGFAAFGLILKTGWRVD----- 118
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-----GLA---- 355
D+VV + C + + + +Q+ + G + +Y GL
Sbjct: 119 --------DIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRR 170
Query: 356 MESYRRCL-----------------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
E R L +++ F+ EG++++A + M GV
Sbjct: 171 AEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVT 227
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
Y + LC A V +++ + KP +T+ +I +D +FQ M
Sbjct: 228 YNTIIDGLCKAQEVDRAEDVFQQMVE-KGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKM 286
Query: 459 KDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
D +P+ T N ++ + +A+ +F++ +KPD TY
Sbjct: 287 VDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRG-------------VKPDHVTY 333
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+++++ A + E V++ M G + D + ++ +A E F +++
Sbjct: 334 NTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMID 393
Query: 578 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
G P+ + ++ + +E+ V I M+
Sbjct: 394 KGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMS 427
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 150/365 (41%), Gaps = 79/365 (21%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ YT+L+ LGKAGR EA + ML D L PD+ +++ LG+VG ++EL +
Sbjct: 304 YTYTELIKGLGKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNILGKVGRVEELTNVFS 362
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS--HQWKGVFWVFKQLRKSGLK 346
M M R P +V YN V+ A S H + W F +++ +
Sbjct: 363 EM---------GMWR------CTPTVVSYNTVIKALFESKAHVSEVSSW-FDKMKADSVS 406
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
PS TY +L+ + + ++ +A+ + M+++G + Y L L
Sbjct: 407 PSEFTYS------------ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINAL 454
Query: 407 CNNGRWQDAMLVVEKIKS-------------LRH---------------------SKPLE 432
R++ A + +++K ++H S P
Sbjct: 455 GKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDV 514
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+ L+ + G I++ S+ + M+++ C +I + N +L ++R + +A E+FE
Sbjct: 515 YAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFET 574
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
+ +KPD TY+++L A A +E + + M G + D
Sbjct: 575 IKHSG-------------IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAIT 621
Query: 552 HAWLL 556
++ +L
Sbjct: 622 YSSIL 626
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 14/214 (6%)
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
+L LV+A +++A++ + R T+S Y + L G+ + V ++
Sbjct: 164 VLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDM 481
+ P IT++ LI S G D I +F MKD+C +P +L +Y +
Sbjct: 224 CNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGK 283
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
KA +LFEE RA S P YTY+ +++ A + + YK M
Sbjct: 284 VEKALDLFEEMKRAGCS-------------PTVYTYTELIKGLGKAGRVDEAYGFYKDML 330
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
G D L+ + G+ L + F +
Sbjct: 331 RDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEM 364
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 87/213 (40%), Gaps = 24/213 (11%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE---L 470
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+ S VY ++ GK G+ EA+ +FN M ++ PD+ AY+++ + + G+
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEM-KNQGSGPDVYAYNALMSGMVKAGM 529
Query: 280 LKELVKLIERMRQKPSKRIKNMHR----------------KNWDPV----LEPDLVVYNA 319
+ E L+ +M + + N H + ++ + ++PD V YN
Sbjct: 530 INEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNT 589
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+L + ++ + ++++ G + A TY
Sbjct: 590 LLGCFAHAGMFEEAARMMREMKDKGFEYDAITY 622
>gi|326522967|dbj|BAJ88529.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 174/418 (41%), Gaps = 46/418 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L + LG + W Q + + W+ K + + +Y+KL++++G+ G+ A+ +F+ M
Sbjct: 92 LFEELGRRDGWVQCLEIFRWMQ--KQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQM- 148
Query: 256 EDCNLYPDIAAYHS-VAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ PD + Y+S + L K LVK + ++K M R +P++
Sbjct: 149 RNSGCKPDTSVYNSLIGAHLHSRDKSKALVKALGYF-----DKMKGMER------CQPNI 197
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V YN +L AC + K V +FK L +S + P TY ++ Y +
Sbjct: 198 VTYNILLRACARASDTKQVDILFKDLDESIVSPDIYTYNGVIDGY------------GKN 245
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLE 432
G I E + + M+ + + L + + GR Q + + KSL SK P
Sbjct: 246 GMITEMESVLVRMKSKQCRPDVITFNIL---IDSYGRKQTFDKMEQVFKSLLRSKERPTH 302
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
TF +I + + S+ + M++ +PN T ++ +Y+ D SKA+++F+E
Sbjct: 303 PTFNSMITNYGKARLREKAESVIEKMQELGFKPNYVTQECLINMYAYCDCVSKAQQIFDE 362
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
+ S+ PL + ++ML+A + + G +
Sbjct: 363 LVSSQST---------VPLS----SLNAMLDAYCMNRLPMEADRLLDTAIEKGVVPSAST 409
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
+ L +RA L++ + + G +P+ FF + L +N + V N+
Sbjct: 410 YKLLYRAYTRANDKMLVQKLLQRMNKQGIVPNKKFFLDALEAFGTSANKSRRVQTSNS 467
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 143/350 (40%), Gaps = 62/350 (17%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD +AY ++ + G ++ V + RM D ++P LV YN VL
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRM---------------VDGGVQPALVTYNVVL 227
Query: 322 NA----CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR---------------- 361
+ VP WK V + +++ G++ TY + RR
Sbjct: 228 HVYSKMSVP---WKEVVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKA 284
Query: 362 -------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
L+ + + + EA+ ++ ME G + Y L +G ++
Sbjct: 285 AGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEE 344
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDG-GHIDDCISIFQHM-KDHCEPNIGTVNAM 472
A+ + ++++ R KP +T+T L IS +D G ID ++ + M ++ C PN+ T NA+
Sbjct: 345 ALELKQEME-FRGMKPDVVTYTTL-ISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNAL 402
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
+K++ F++ +F++ S+GY PD T++++L
Sbjct: 403 IKMHGVRGKFTEMMIVFDDL---RSAGYV----------PDVVTWNTLLAVFGQNGLDSE 449
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
V+K M +G ++ + L+ SR G + ++EAG P
Sbjct: 450 VSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYP 499
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 164/397 (41%), Gaps = 96/397 (24%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL-KELVKLIER 289
YT L++ +AGR +A+ +F M+ D + P + Y+ V ++ + KE+V L++
Sbjct: 188 YTALVSEFSRAGRFRDAVAVFRRMV-DGGVQPALVTYNVVLHVYSKMSVPWKEVVVLVDS 246
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M++ +E D YN +++ C ++ +F +++ +G +P
Sbjct: 247 MKEDG---------------IELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDK 291
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
T+ LL V +A E EA+ ++ ME G + Y L +
Sbjct: 292 VTFN--------SLLDVYGKARRHE----EAIGVLKKMENAGCTPSVVTYNSLISAYVKD 339
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG-GHIDDCISIFQHM-KDHCEPNIG 467
G ++A+ + ++++ R KP +T+T LI S +D G ID ++ + M ++ C PN+
Sbjct: 340 GLLEEALELKQEME-FRGMKPDVVTYTTLI-SGLDRIGKIDAALATYSEMVRNGCSPNLC 397
Query: 468 TVNAM-----------------------------------LKVYSRNDMFSKAKELFEET 492
T NA+ L V+ +N + S+ +F+E
Sbjct: 398 TYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEM 457
Query: 493 TRANSSGY-----TFLSGDG--------------------APLKPDEYTYSSMLEASATA 527
+A GY T++S A + PD TY+++L A A
Sbjct: 458 KKA---GYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARG 514
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+W E ++ M C+ D+ ++ LL + A K
Sbjct: 515 GRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKK 551
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 124/281 (44%), Gaps = 26/281 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD Y A+++ + +++ VF+++ G++P+ TY + + Y + +
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSK------MSVP 236
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
W+ E V V +M++ G+ Y L C G +++A + +++K+ +P
Sbjct: 237 WK-----EVVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGF-EPD 290
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
++TF L+ ++ I + + M++ C P++ T N+++ Y ++ + +A EL +
Sbjct: 291 KVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQ 350
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E + +KPD TY++++ + + Y M +GC +
Sbjct: 351 EM-------------EFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLC 397
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ GK + FD L AG +P + + +L
Sbjct: 398 TYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLL 438
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 141/387 (36%), Gaps = 92/387 (23%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K G +G + + M V D L+ + + LLA+ G+ G E +F M
Sbjct: 402 LIKMHGVRGKFTEMMIVFD---DLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEM- 457
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ Y S+ + + GL + +++ +RM + + PD+
Sbjct: 458 KKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRM---------------IEAGIYPDIS 502
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY---------------- 359
YNAVL+A +W +F ++ KP +Y + +Y
Sbjct: 503 TYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDI 562
Query: 360 -------------------------------------RRC-----LLKVLVRAFWEEGKI 377
RRC +L +V + + +
Sbjct: 563 YAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMV 622
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+ + M++ + +A+ Y L G + ++ +IKS +P ++
Sbjct: 623 KKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKS-SGMRPDRYSYNT 681
Query: 438 LIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
+I + G + + +F MK +P+I T N +K Y N MF +A +L
Sbjct: 682 VIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVR------ 735
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+L G KP+E TY+S+LE
Sbjct: 736 -----YLVAQGC--KPNERTYNSILEG 755
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 61/321 (19%), Positives = 118/321 (36%), Gaps = 70/321 (21%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ R Y L++ + G +A+ I+ M+E +YPDI+ Y++V L + G +
Sbjct: 463 IPERDTYVSLISSYSRCGLFDQAMEIYKRMIE-AGIYPDISTYNAVLSALARGGRWVQAE 521
Query: 285 KLIERMRQKPSK--------------------RIKNMHRKNWDPVLEP------------ 312
KL M + K ++K + + +EP
Sbjct: 522 KLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVN 581
Query: 313 -----------------------DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
D+ V NA+++ + K V V ++++ + SA
Sbjct: 582 NKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSA 641
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
ATY M Y R G + A + ++ G+ Y +
Sbjct: 642 ATYNSLMHMYSRL------------GDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRK 689
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
G+ ++A + ++K KP +T+ I S + ++ I + +++ C+PN T
Sbjct: 690 GQMKEASRLFSEMKC-SGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERT 748
Query: 469 VNAMLKVYSRNDMFSKAKELF 489
N++L+ Y R+ +AK
Sbjct: 749 YNSILEGYCRHGRMVEAKSFL 769
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 128/292 (43%), Gaps = 39/292 (13%)
Query: 304 KNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ WDP++ PD++ YN +++A Q ++ + ++ P+ T
Sbjct: 165 RQWDPIISVCEWIVYRSSFRPDIICYNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDT 224
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y L + +Y C + L RA EG I+E M++ G+ +A+VY L
Sbjct: 225 YALLLRAY--CNARSLHRA---EGVISE-------MQEHGIPPSATVYNAYLDGLLKARC 272
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 470
A+ V +++K R E T+T +I + IF M+ C+ NI T
Sbjct: 273 TVKAVEVYQRMKKERCRTNTE-TYTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYT 331
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
A++ ++R + KA+E+FE+ +A +PD Y Y++++EA + A
Sbjct: 332 ALVNAFAREGLCEKAEEVFEQMQQAGH-------------EPDVYAYNALMEAYSRAGFP 378
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ ++ M GC+ D+ + L+ RAG E F+SL + G P
Sbjct: 379 QGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMAP 430
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 137/345 (39%), Gaps = 43/345 (12%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K +R + YT ++ + GK+ +P A++IFN M + +I Y ++ + G
Sbjct: 283 MKKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEM-QSIGCKANICTYTALVNAFAREG 341
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
L ++ ++ E+M+Q EPD+ YNA++ A + +G +F
Sbjct: 342 LCEKAEEVFEQMQQAGH---------------EPDVYAYNALMEAYSRAGFPQGASEIFS 386
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
++ G +P A+Y +LV A+ G EA A +++Q+G+ T
Sbjct: 387 LMQHMGCEPDRASY------------NILVDAYGRAGLHREAEATFESLKQQGMAPTMKS 434
Query: 399 YYELACCLC---NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
+ L N GR + M + K LR P ++ + G +DD +
Sbjct: 435 HMLLLSAHARSGNVGRCEQVMAQLHK-SGLR---PDTFALNAMLHAYARAGRLDDMERLL 490
Query: 456 QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
M ++G+ N + Y+R + + FE R G + D
Sbjct: 491 AAMDLAGSADVGSHNVAVNAYARAGYLGRMEAAFEGIRRRK--------GKKGGIDADVV 542
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
+++S + A ++ +++ M +GC D L+ S
Sbjct: 543 SWTSRMGGYARKKEYGKCLEIFEEMVDAGCYPDAGTAKVLMAACS 587
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 152/401 (37%), Gaps = 53/401 (13%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LL R EA+ + + M+E PD + ++ L Q E V L+ERM K
Sbjct: 151 LLNGFCHGNRISEAVALVDQMVE-MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 209
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+PDLV Y AV+N + + ++ K ++ Y
Sbjct: 210 GC---------------QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY- 253
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
++ + +++A ME +G+ Y L CLCN GRW
Sbjct: 254 -----------NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWS 302
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNA 471
DA ++ + ++ P + F LI + + G + + ++ M HC P++ N
Sbjct: 303 DASRLLSDMLE-KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 472 MLKVYSRNDMFSKAKELFEETTR----ANSSGYTFL--------SGDGAPL--------- 510
++K + + + E+F E ++ N+ YT L D A +
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421
Query: 511 -KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
PD TY+ +L+ E V++ M +LD + ++ +AGK
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGW 481
Query: 570 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
F SL G P+ + +T M+ + E+A AL M
Sbjct: 482 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 129/296 (43%), Gaps = 42/296 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L++ L GR +A R+ + MLE N+ PD+ ++++ + G L E KL +
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEK-NINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +K+ H PD+V YN ++ + + VF+++ + GL +
Sbjct: 345 EM-------VKSKH-------CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY L+ F++ + A + M GV Y L LCN
Sbjct: 391 TVTY------------TTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIG 467
NG + A++V E ++ R K +T+T +I + G ++D +F + +PN+
Sbjct: 439 NGNVETALVVFEYMQK-RDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
T M+ + R + +A LF E + DG PL P+ TY++++ A
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVE-----------MKEDG-PL-PNSGTYNTLIRA 540
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 125/305 (40%), Gaps = 32/305 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L + G W A +L + DL + L+ K G+ EA ++++ M+
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDL---VFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + +PD+ AY+++ + ++E +++ M Q+ L + V
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG---------------LVGNTV 392
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y +++ + VFKQ+ G+ P TY +L+ G
Sbjct: 393 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY------------NILLDGLCNNG 440
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ A+ M++R + Y + LC G+ +D + + SL+ KP +T+
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL-SLKGVKPNVVTY 499
Query: 436 TGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
T ++ G ++ ++F MK D PN GT N +++ R+ + + EL +E
Sbjct: 500 TTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRS 559
Query: 495 ANSSG 499
+G
Sbjct: 560 CGFAG 564
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 139/340 (40%), Gaps = 43/340 (12%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
+S F Y ++ + K G A +F+ M + L PDI Y+S+ G++GLL E
Sbjct: 250 QSVFTYNIMIGYMCKEGDMVTAKSLFHQM-KQMGLTPDIVTYNSLIDGYGKLGLLDESFC 308
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
L E M+ D EPD++ YNA++N Q F +++ SGL
Sbjct: 309 LFEEMK---------------DVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGL 353
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
KP+ TY L+ A +E + +A+ + +M + G+ Y L
Sbjct: 354 KPNVVTY------------STLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDA 401
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 464
C G DA+ + +++ ++ + +T+T L+ G + + +F+ M K P
Sbjct: 402 NCKAGYLSDALKLADEMLQVQVGFNV-VTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTP 460
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
N+ T A++ + +N R ++ +KPD Y +++
Sbjct: 461 NLKTYTALVHGHIKNK-------------RVENALELLKEIKEKKIKPDLLLYGTIIWGL 507
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+ ++ E E+V M G + + + + + GK
Sbjct: 508 CSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGK 547
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/451 (18%), Positives = 177/451 (39%), Gaps = 88/451 (19%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + M + KF+ M + GL E L+ G A+ + D + ++
Sbjct: 363 LIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQ 422
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
++ + YT LL L K GR EA +F M++ + P++ Y A+ G +
Sbjct: 423 VGFNVVT---YTTLLDGLCKEGRMMEAEDLFRAMIK-AGVTPNLKTY--TALVHGHI--- 473
Query: 281 KELVKLIERMRQKPSKRIKN---MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
+KR++N + ++ + ++PDL++Y ++ ++ + +V
Sbjct: 474 -------------KNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVM 520
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
+++ G++ ++ Y + M++Y ++ GK EA+ ++ M GV T
Sbjct: 521 SEMKACGIRANSVIYTIRMDAY------------FKTGKTVEALNLLQEMCDLGVEVTI- 567
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
+TF LI G +++ I F
Sbjct: 568 -----------------------------------VTFCVLIDGLCKKGLVEEAIDYFAR 592
Query: 458 MKD-HCEPN-IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
M D + +PN + A++ +N+ AK+LF+E N + PD+
Sbjct: 593 MADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKN-------------MVPDKI 639
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
Y+++++ + ++ + M+ G +LD + L+ S+ + +
Sbjct: 640 AYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEM 699
Query: 576 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
+ G +P + +L + + ++A+ L
Sbjct: 700 IGKGIVPDEILCIRLLRKYYELGSIDEAIEL 730
>gi|326520353|dbj|BAK07435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 652
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 138/312 (44%), Gaps = 38/312 (12%)
Query: 302 HRKNWDPVLE-----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
H + P++E PDLV+++ +++ + + +F +LR +G++P Y A+
Sbjct: 172 HALTFLPLMEADAVAPDLVLFSNLIHLALRAGDAPKALALFSRLRAAGIRPDLKAYNAAI 231
Query: 357 ESYRRC-LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+Y + LL+ R + ++ GV A Y + L GR A
Sbjct: 232 AAYCKSDLLRDAKRLL------------LHDVPADGVAPDAESYAPVLAALARRGRHLAA 279
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID---DCISIFQHMK-DHCEPNIGTVNA 471
+ + ++++ KP +++ +++++ G +D D +F M+ P++ T N
Sbjct: 280 VSLFSHMRAVARVKP-DLSVFNIVLNAY--GQLDLARDADRLFWSMRRAGVPPSVVTYNT 336
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
ML+VY +F +A LF Y+ S G ++P+ TY++M+ A + +
Sbjct: 337 MLRVYGDAGLFGEAVHLFGLM-------YSTASDGGTVVRPNVVTYNTMIAIHGKALEDD 389
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + M SG Q + ++ +L +AGK FD L E+G P+ + M+
Sbjct: 390 KAGSLVQQMQASGIQPNAVTYSTVLSIWVKAGKLDRAAKLFDKLRESGTEMDPVLYQTMV 449
Query: 592 IQAIVQSNYEKA 603
+ YE+A
Sbjct: 450 VA------YERA 455
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 89/226 (39%), Gaps = 40/226 (17%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN-----LYPDIAAYHSVAVTLGQVGLLK 281
S Y +L + G AG EA+ +F LM + + P++ Y+++ G+
Sbjct: 330 SVVTYNTMLRVYGDAGLFGEAVHLFGLMYSTASDGGTVVRPNVVTYNTMIAIHGKALEDD 389
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
+ L+++M+ ++P+ V Y+ VL+ V + + +F +LR
Sbjct: 390 KAGSLVQQMQASG---------------IQPNAVTYSTVLSIWVKAGKLDRAAKLFDKLR 434
Query: 342 KSGLKPSAATYGLAMESYRRC--------LLKVL------------VRAFWEEGKINEAV 381
+SG + Y + +Y R LL+ L ++ G++ EA
Sbjct: 435 ESGTEMDPVLYQTMVVAYERAGLVSQSKRLLRELRHPDQAIPKETAMKILASAGRVEEAA 494
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
R G V SV+ + N R + + V ++++ L H
Sbjct: 495 WLFRRAVHTGEVKDPSVHRAMMALFAKNRRHRSVVEVFDEMRKLGH 540
>gi|299473702|emb|CBN78095.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 537
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 30/222 (13%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G W++AMS++ + KD F Y+ ++ G+ G+P +AL + + M++ + PD
Sbjct: 144 GRWKEAMSMMKQME--KDGIAF-DEFTYSSVIVACGRGGQPRKALELLDEMVQVHGIAPD 200
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y + G GL +E + L+E+M ++ L PD YN+ + A
Sbjct: 201 MICYGAAIQACGDAGLTEEALSLMEKMSREG---------------LLPDKTAYNSAIIA 245
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
C QW+ + ++R GL+P +Y AM++ C G+ A+
Sbjct: 246 CGEKGQWEKALNLLGEMRSKGLRPDQNSYRFAMQA---CSTG---------GRWERALQL 293
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+ ME+ G + + L + +W+ AM ++ ++ L
Sbjct: 294 LHEMEEDGSTPDVAAFQTALDALKDAAQWEKAMDLISEMDEL 335
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 101/259 (38%), Gaps = 24/259 (9%)
Query: 357 ESYRRC---LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
E+ R C L K+ R WE+ A A+ RGV +Y + GRW+
Sbjct: 93 EAQRACAADLKKLGQRGQWED-----ATRALVGARVRGVPVNVYMYNSAISAVSKAGRWK 147
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD--HCEPNIGTVNA 471
+AM ++++++ + E T++ +I++ GG + + M P++ A
Sbjct: 148 EAMSMMKQMEKDGIAFD-EFTYSSVIVACGRGGQPRKALELLDEMVQVHGIAPDMICYGA 206
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
++ + +A L E+ +R L PD+ Y+S + A QWE
Sbjct: 207 AIQACGDAGLTEEALSLMEKMSREG-------------LLPDKTAYNSAIIACGEKGQWE 253
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ M G + DQ + + + S G+ + E G P F L
Sbjct: 254 KALNLLGEMRSKGLRPDQNSYRFAMQACSTGGRWERALQLLHEMEEDGSTPDVAAFQTAL 313
Query: 592 IQAIVQSNYEKAVALINAM 610
+ +EKA+ LI+ M
Sbjct: 314 DALKDAAQWEKAMDLISEM 332
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 24/197 (12%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M++ GL+ + + G+KG W +A+++L + + D S Y +
Sbjct: 227 MSREGLLPDKTAYNSAIIACGEKGQWEKALNLLGEMRSKGLRPDQNS---YRFAMQACST 283
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSK- 296
GR AL++ + M ED + PD+AA+ + L ++ + LI M + PS+
Sbjct: 284 GGRWERALQLLHEMEEDGST-PDVAAFQTALDALKDAAQWEKAMDLISEMDELGVPPSEG 342
Query: 297 -----RIKNMHRKNWDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
W P L+P+L Y +++ AC+ ++ L
Sbjct: 343 CFAAAIAACAEVGEWLPASTARKLMGYYGLQPELETYKSIIKACLVGKEFNMALTTLFDL 402
Query: 341 RKSGLKPSAATYGLAME 357
+KSG + T+ + +E
Sbjct: 403 QKSGRRADQETWDMLIE 419
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 102/252 (40%), Gaps = 31/252 (12%)
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
+L KL +R + + + R R PV ++ +YN+ ++A + +WK + KQ+
Sbjct: 101 DLKKLGQRGQWEDATRALVGARVRGVPV---NVYMYNSAISAVSKAGRWKEAMSMMKQME 157
Query: 342 KSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
K G+ TY ++ A G+ +A+ + M Q + + Y
Sbjct: 158 KDGIAFDEFTY------------SSVIVACGRGGQPRKALELLDEMVQVHGIAPDMICYG 205
Query: 402 LACCLCNN-GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 460
A C + G ++A+ ++EK+ S P + + II+ + G + +++ M+
Sbjct: 206 AAIQACGDAGLTEEALSLMEKM-SREGLLPDKTAYNSAIIACGEKGQWEKALNLLGEMRS 264
Query: 461 H-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
P+ + ++ S + +A +L E S+ PD + +
Sbjct: 265 KGLRPDQNSYRFAMQACSTGGRWERALQLLHEMEEDGST-------------PDVAAFQT 311
Query: 520 MLEASATAHQWE 531
L+A A QWE
Sbjct: 312 ALDALKDAAQWE 323
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 170/417 (40%), Gaps = 64/417 (15%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
R ++SR TKL+ I+ + GRP E I + ++E + P + Y ++ L
Sbjct: 70 RTVRSR---TKLMNIMIEKGRPQEVQSILDSIIEGGH-KPSLVTYTTLLAALTIQKHFDS 125
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
+ +I ++ + +EPD + +NAV+NA S + F ++++
Sbjct: 126 IHSIISQVEENG---------------MEPDSIFFNAVINAFSESGNMQEAMKYFWKMKE 170
Query: 343 SGLKPSAAT-------YGLAMESYRRCLL-----------------KVLVRAFWEEGKIN 378
SG KP+ +T YG+A E L VLVRA+ + I
Sbjct: 171 SGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIM 230
Query: 379 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
+A V M G+ A Y +A NG A ++ ++++ + +P E T +
Sbjct: 231 KAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQN-SNVQPNERTCCII 289
Query: 439 IISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVY---SRNDMFSKAKELFEETTR 494
I G I + + MKD +PN+ N+++K + D ++ L EE
Sbjct: 290 IGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFG- 348
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
+KPD T+S+++ A + A + ++ M + Q D ++
Sbjct: 349 ---------------VKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSI 393
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
L RAG+ E ++++++G P+ + FT ++ E A+ + M
Sbjct: 394 LAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMC 450
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 143/385 (37%), Gaps = 80/385 (20%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ SE + K+ M +SG T L+KG
Sbjct: 148 VINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGY-------------------- 187
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
G AG P E+ ++ LM +D N+ P++ Y+
Sbjct: 188 ------------------GIAGEPEESQKLLELMSQDENVRPNLRTYN------------ 217
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
V + +K + N+ K L+PD V YN + A + + + ++
Sbjct: 218 ---VLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEM 274
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
+ S ++P+ R C +++ + +EGKI EA+ V M+ G+ V+
Sbjct: 275 QNSNVQPNE----------RTCC--IIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFN 322
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-K 459
L + +D + V + KP ITF+ ++ + G +D C IF M K
Sbjct: 323 SLIKGFI-DAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVK 381
Query: 460 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
+P+ + + K Y R KA+E+ + SG+ P+ +++
Sbjct: 382 ARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIK---SGF----------HPNVVIFTT 428
Query: 520 MLEASATAHQWEYFEYVYKGMALSG 544
++ +A + EY +++ M G
Sbjct: 429 IINGWCSAGRMEYAIKIFEKMCECG 453
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 147/359 (40%), Gaps = 43/359 (11%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LL R +A+ + M+E PD ++++ L + E V L++RM K
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVE-MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK 215
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+PDLV Y V+N + K++ + ++P Y
Sbjct: 216 GC---------------QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY- 259
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
++ A +N+A+ M+ +G+ Y L CLCN GRW
Sbjct: 260 -----------NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAM 472
DA ++ + R P +TF+ LI + + G + + ++ M K +P+I T +++
Sbjct: 309 DASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
+ + +D +AK +FE +S D P+ TY+++++ A + +
Sbjct: 368 INGFCMHDRLDEAKHMFE----------LMISKD---CFPNVVTYNTLIKGFCKAKRVDE 414
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+++ M+ G + + L+ +A +C + F ++ G +P + ++ +L
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 153/417 (36%), Gaps = 97/417 (23%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F + L+ L + R EA+ + + ++++ C PD+ Y V L + G + + L+
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ--PDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
++M Q +EP +V+YN +++A +F ++ G++P
Sbjct: 245 KKMEQGK---------------IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 348 SAATYGLAMESYRRCL---------------------------LKVLVRAFWEEGKINEA 380
+ TY S RCL L+ AF +EGK+ EA
Sbjct: 290 NVVTY----NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 381 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM----LVVEK------------IKS 424
M +R + Y L C + R +A L++ K IK
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 425 LRHSKPLE------------------ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 465
+K ++ +T+T LI D+ +F+ M D P+
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
I T + +L N A +FE R+ ++PD YTY+ M+E
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSK-------------MEPDIYTYNIMIEGMC 512
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
A + E ++ ++L G + + + ++ R G + F + E G +P
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLP 569
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 30/219 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ +A A +F M+ D + PDI Y + L G ++ + + E +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSD-GVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ +EPD+ YN ++ + + + + +F L G+KP+
Sbjct: 493 QRSK---------------MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY M F +G EA A R M++ G + + Y L +G
Sbjct: 538 TYTTMMS------------GFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
+ ++ +++S R + + GL+ + + G +D
Sbjct: 586 DKAASAELIREMRSCRFVG--DASTIGLVTNMLHDGRLD 622
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 164/404 (40%), Gaps = 58/404 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+T ++ + G+ FN+M+ + L P+I +Y+++ G+ E
Sbjct: 330 TFTSIIHLYSVCGQVENCEAAFNMMIAE-GLKPNIVSYNALIGAYAARGMDNEAHLFFNE 388
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
++Q PD+V Y ++LNA S + +F +++++ LKP+
Sbjct: 389 IKQNG---------------FRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNL 433
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV-VGTASVYYELACC-LC 407
+Y L+ A+ G + +A+ +R MEQ G+ S+ LA C C
Sbjct: 434 VSY------------NALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRC 481
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
+ D +L +++ ++ + + + I S M+ G D I +++ M K + +
Sbjct: 482 SRKVKIDTVLTAAEMRGIKLNT---VAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDS 538
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEE--------TTRANSSGYTFLSGDGAPLK------- 511
T ++ + + +A EE + SS S G ++
Sbjct: 539 VTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNL 598
Query: 512 -------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
PD TY++ML+A A WE +++ M S +LD A L+ ++ G+
Sbjct: 599 MKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFNKGGQ 658
Query: 565 CHLLEHAFDSLLEAGEIPHP-LFFTEMLIQAIVQSNYEKAVALI 607
+ +S+ E EIP F EM+ + ++ AV +I
Sbjct: 659 PGRVLSLAESMREK-EIPFSDTIFFEMVSACSILQDWRTAVDMI 701
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 146/334 (43%), Gaps = 53/334 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLM 254
L+K L +GS V W LK++++ ++R +Y ++ + + R +A +F
Sbjct: 121 LIKELTQRGSIEHCNRVFRW---LKNQKNYRARNDIYNMMIRLHARHNRTDQARGLF-FE 176
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+++ PD+ Y+++ G+ G + + +++ M + + P
Sbjct: 177 MQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLR---------------AAIPPSR 221
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
YN ++NAC S WK V K++ ++G+ P T+ +++ AF
Sbjct: 222 STYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTH------------NIILSAFKSG 269
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK----P 430
+ ++A++ M+ + + + CL ++ A +E S+R K P
Sbjct: 270 AQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKA---IEIFNSMREKKSECTP 326
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+TFT +I G +++C + F M + +PNI + NA++ Y+ M ++A F
Sbjct: 327 DVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFF 386
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
E + +G+ +PD +Y+S+L A
Sbjct: 387 NEIKQ---NGF----------RPDIVSYTSLLNA 407
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 449 DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
D +F M++ C+P++ T NA++ + R + A + ++ RA
Sbjct: 168 DQARGLFFEMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLRA------------ 215
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
+ P TY++++ A ++ W+ V K M +G D H +++ A ++G +
Sbjct: 216 -AIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHN-IILSAFKSGAQYS 273
Query: 568 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ-SNYEKAVALINAM 610
++ L++ I ++I +V+ Y+KA+ + N+M
Sbjct: 274 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSM 317
>gi|115440859|ref|NP_001044709.1| Os01g0833000 [Oryza sativa Japonica Group]
gi|20805252|dbj|BAB92918.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113534240|dbj|BAF06623.1| Os01g0833000 [Oryza sativa Japonica Group]
Length = 665
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 151/357 (42%), Gaps = 45/357 (12%)
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
L + D + PD +Y ++ L + G L + + M D + P
Sbjct: 152 LEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPLME---------------DDAVAP 196
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLR-KSGLKPSAATYGLAMESYRRC-LLKVLVRA 370
DLV+++ +++ + +F +LR +G+KP Y A+ +Y + LL+ R
Sbjct: 197 DLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRL 256
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ +M GV A Y + L GR A+ + ++++ KP
Sbjct: 257 L------------LHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKP 304
Query: 431 LEITFTGLIISSMDGGHID---DCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAK 486
+++ +++++ G +D + +F M+ P++ T N ML+VY +F +A
Sbjct: 305 -DLSVFNIVLNAY--GQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAV 361
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
LF A S G G+ +KP+ TY++M+ + + E + + M +G Q
Sbjct: 362 HLFGLMRSAASDGS---DRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQ 418
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
+ ++ +L +AGK F+ L EAG P+ + M++ YE+A
Sbjct: 419 PNAITYSTILSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQTMVVA------YERA 469
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 95/496 (19%), Positives = 190/496 (38%), Gaps = 88/496 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L G A++ L ++D +++ L+ + + G +AL +F+ +
Sbjct: 169 LLAALTRAGHLDHALTFLPL---MEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLR 225
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL----- 310
+ PD+ AY++ + LL++ +L+ + PS + +++ P+L
Sbjct: 226 GAAGIKPDLKAYNAAIAAYCKSDLLRDANRLL--LHDMPSDGVAP-DAESYSPILAALAR 282
Query: 311 --------------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+PDL V+N VLNA + +F +R++G+ PS
Sbjct: 283 RGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVV 342
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAV-------AAVRNMEQRG--VVGTASVYYE 401
TY ++R + + G EAV +A + RG V+ V Y
Sbjct: 343 TY------------NTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPNVVTYN 390
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHS------KPLEITFTGLIISSMDGGHIDDCISIF 455
+ L EK SL +P IT++ ++ + G +D +F
Sbjct: 391 TMIAIYGKS------LEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLF 444
Query: 456 QHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 514
+ +++ E + M+ Y R + S++K L + + ++
Sbjct: 445 EKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDS-----------------ED 487
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 574
+ ++ A A + E ++++ A +G D + + ++ +++ + + FD
Sbjct: 488 VPKETAIKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDE 547
Query: 575 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER---QWTELFESNED 631
+ +AG +P + ++KA AL AM ++R Q L + +D
Sbjct: 548 MRKAGSLPDSETIAITMNAHGKLKEFDKAAALYRAMREEGCVFSDRVHFQMVSLLGAQKD 607
Query: 632 RISRDKLEKLLNALCN 647
D LE LL L +
Sbjct: 608 ---FDALEALLGELSD 620
>gi|125528270|gb|EAY76384.1| hypothetical protein OsI_04314 [Oryza sativa Indica Group]
Length = 665
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 151/357 (42%), Gaps = 45/357 (12%)
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
L + D + PD +Y ++ L + G L + + M D + P
Sbjct: 152 LEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPLME---------------DDAVAP 196
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLR-KSGLKPSAATYGLAMESYRRC-LLKVLVRA 370
DLV+++ +++ + +F +LR +G+KP Y A+ +Y + LL+ R
Sbjct: 197 DLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRL 256
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ +M GV A Y + L GR A+ + ++++ KP
Sbjct: 257 L------------LHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRTVARVKP 304
Query: 431 LEITFTGLIISSMDGGHID---DCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAK 486
+++ +++++ G +D + +F M+ P++ T N ML+VY +F +A
Sbjct: 305 -DLSVFNIVLNAY--GQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAV 361
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
LF A S G G+ +KP+ TY++M+ + + E + + M +G Q
Sbjct: 362 HLFGLMRSAASDGS---DRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQ 418
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
+ ++ +L +AGK F+ L EAG P+ + M++ YE+A
Sbjct: 419 PNAITYSTILSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQTMVVA------YERA 469
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 95/496 (19%), Positives = 190/496 (38%), Gaps = 88/496 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L G A++ L ++D +++ L+ + + G +AL +F+ +
Sbjct: 169 LLAALTRAGHLDHALTFLPL---MEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLR 225
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL----- 310
+ PD+ AY++ + LL++ +L+ + PS + +++ P+L
Sbjct: 226 GAAGIKPDLKAYNAAIAAYCKSDLLRDANRLL--LHDMPSDGVAP-DAESYSPILAALAR 282
Query: 311 --------------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+PDL V+N VLNA + +F +R++G+ PS
Sbjct: 283 RGRHLAAVSLFTHMRTVARVKPDLSVFNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVV 342
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAV-------AAVRNMEQRG--VVGTASVYYE 401
TY ++R + + G EAV +A + RG V+ V Y
Sbjct: 343 TY------------NTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPNVVTYN 390
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHS------KPLEITFTGLIISSMDGGHIDDCISIF 455
+ L EK SL +P IT++ ++ + G +D +F
Sbjct: 391 TMIAIYGKS------LEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLF 444
Query: 456 QHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 514
+ +++ E + M+ Y R + S++K L + + ++
Sbjct: 445 EKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDS-----------------ED 487
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 574
+ ++ A A + E ++++ A +G D + + ++ +++ + + FD
Sbjct: 488 VPKETAIKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDE 547
Query: 575 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER---QWTELFESNED 631
+ +AG +P + ++KA AL AM ++R Q L + +D
Sbjct: 548 MRKAGSLPDSETIAITMNAHGKLKEFDKAAALYRAMREEGCVFSDRVHFQMVSLLGAQKD 607
Query: 632 RISRDKLEKLLNALCN 647
D LE LL L +
Sbjct: 608 ---FDALEALLGELSD 620
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 147/370 (39%), Gaps = 50/370 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+KGL G +A ++ K V YT L+ L KAGR EA ++F+
Sbjct: 153 LIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDE 212
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ PD Y S+ L ++G ++E +R M + + EPD
Sbjct: 213 AVERGFIPDAVTYTSIIDGLCKLGRVEE-----------GCERFHEMRNRGY----EPDA 257
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V Y A+++ + + V++Q+ +SG S TY + ++ +
Sbjct: 258 VTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILD------------GLCKA 305
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
G++ EA A ME+RG V T Y L C+ G A+ + ++ R +P ++
Sbjct: 306 GRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLD-RGCEPNLVS 364
Query: 435 FTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAML-KVYSRNDMFSKAKELFEE 491
+ +I G + F+ + + C P++ T NA L + R D S ELFE
Sbjct: 365 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLC-PDVYTFNAFLHGLCQRLDTVSDGVELFES 423
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD--- 548
+S P+ ++YS +++ A E +++ M G D
Sbjct: 424 MVSQGTS-------------PNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVV 470
Query: 549 -QTKHAWLLV 557
T WL +
Sbjct: 471 FNTLIRWLCI 480
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 155/427 (36%), Gaps = 73/427 (17%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ +K+ L + YT L+ L KAGR EA+ + M+E N P + Y V L + G
Sbjct: 68 MDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGN-SPTLKTYTVVIDGLSKAG 126
Query: 279 LLKELVKLIERM---------------------RQKPSKR---IKNMHRKNWDPVLEPDL 314
++E ++ M KP + K + + PD+
Sbjct: 127 RVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDV 186
Query: 315 VVYNAVLNACVPSHQWKGVFWVF-KQLRKSGLKPSAATY----------GLAMESYRR-- 361
V Y ++++ + + VF + + G P A TY G E R
Sbjct: 187 VTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFH 246
Query: 362 -----------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
L+ F + I +A R M Q G V + Y + LC G
Sbjct: 247 EMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAG 306
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
R +A ++ R +T++ L+ G++ + +F+ M D CEPN+ +
Sbjct: 307 RVAEAYATFLAMEE-RGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSY 365
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA-----S 524
N +++ R +KA FE+ + L PD YT+++ L
Sbjct: 366 NIIIRGLCRAGKLAKAYFYFEKLLQRR-------------LCPDVYTFNAFLHGLCQRLD 412
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
+ E FE M G + ++ L+ RAG + F ++ G P
Sbjct: 413 TVSDGVELFE----SMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDV 468
Query: 585 LFFTEML 591
+ F ++
Sbjct: 469 VVFNTLI 475
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+V + V+N + F V ++ ++G +P TY V +
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTY------------NVFIDGL 52
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ ++++A ++ M+++ + T Y L L GR +AM V+E++ +S L
Sbjct: 53 CKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTL 112
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ T+T +I G +++ IF M + C P+ A++K ++ +A L++
Sbjct: 113 K-TYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYK 171
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
E AN+ + A PD TY+S+++ A +
Sbjct: 172 E---ANARKHH------ATAVPDVVTYTSLIDGLCKAGR 201
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 122/304 (40%), Gaps = 30/304 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P V Y A+++ + + + V +Q+ + G P+ TY V++
Sbjct: 75 PTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTY------------TVVIDGL 122
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH---S 428
+ G++ EA +M G A VY L LC +G+ ++A + ++ + +H +
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIF--QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
P +T+T LI G I + +F + ++ P+ T +++ + +
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
E F E + GY +PD TY+++++ A VY+ M SG
Sbjct: 243 ERFHEM---RNRGY----------EPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTV 289
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
+ + +L +AG+ F ++ E G + + ++ ++ + N AV L
Sbjct: 290 VSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVEL 349
Query: 607 INAM 610
M
Sbjct: 350 FRRM 353
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 110/281 (39%), Gaps = 34/281 (12%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
+ +A L+D + +M K + R M QSG + + +L GL G +A
Sbjct: 253 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAY 312
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
+ ++++ + + Y+ L+ G A+ +F ML D P++ +Y+ +
Sbjct: 313 ATF---LAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML-DRGCEPNLVSYNII 368
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQ 329
L + G L + E++ Q+ L PD+ +NA L+ C
Sbjct: 369 IRGLCRAGKLAKAYFYFEKLLQRR---------------LCPDVYTFNAFLHGLCQRLDT 413
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+F+ + G P+ +Y + M+ R G + A+ R M
Sbjct: 414 VSDGVELFESMVSQGTSPNLHSYSILMDGICR------------AGGLEVALEIFREMVS 461
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
RGV V+ L LC GR +A+ V +++ R S P
Sbjct: 462 RGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELE--RRSAP 500
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 162/402 (40%), Gaps = 52/402 (12%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
DL+ R T+L I + ++A+ +F+ M++ +P I ++ LL +
Sbjct: 51 DLRERLSKTRLRDI-----KLNDAIDLFSDMVKS-RPFPSIVDFNR---------LLSAI 95
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
VKL K + ++ +K + DL +N V+N Q + ++ K
Sbjct: 96 VKL------KKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKL 149
Query: 344 GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
G +P T G LV F ++++AV+ V M + G Y +
Sbjct: 150 GYEPDRVTIG------------SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAII 197
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHC 462
LC R DA ++I+ + +P +T+T L+ + D + M K
Sbjct: 198 DSLCKTKRVNDAFDFFKEIER-KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 463 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
PN+ T +A+L + +N +AKELFEE R + + PD TYSS++
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS-------------IDPDIVTYSSLVN 303
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ + ++ M GC D + L+ +A + F + + G +
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 583 HPLFFTEMLIQAIVQS-NYEKAVALINAMAYAPFHITERQWT 623
+ + + LIQ Q+ + +KA + M + F I+ WT
Sbjct: 364 NTVTYNT-LIQGFFQAGDVDKAQEFFSQMDF--FGISPDIWT 402
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/350 (19%), Positives = 134/350 (38%), Gaps = 43/350 (12%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
R +A+ + + M+E PDI AY+++ +L + + + + + +K
Sbjct: 170 RVSDAVSLVDKMVE-IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG-------- 220
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
+ P++V Y A++N S +W + + K + P+ TY
Sbjct: 221 -------IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS--------- 264
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
L+ AF + GK+ EA M + + Y L LC + R +A + + +
Sbjct: 265 ---ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLM 321
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM 481
S + +++ LI ++D + +F+ M N T N +++ + +
Sbjct: 322 VS-KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
KA+E F + D + PD +TY+ +L + E +++ M
Sbjct: 381 VDKAQEFFSQM-------------DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
LD + ++ + GK F SL G P + +T M+
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 136/372 (36%), Gaps = 55/372 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G + A+S++D + + K D+ + Y ++ L K R ++A F +
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA---YNAIIDSLCKTKRVNDAFDFFK-EI 216
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + P++ Y ++ L + +L+ M +K + P+++
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK---------------ITPNVI 261
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y+A+L+A V + + +F+++ + + P TY LV
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS------------SLVNGLCLHD 309
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+I+EA M +G + Y L C R +D M + ++ S R +T+
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLVSNTVTY 368
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE--- 491
LI G +D F M P+I T N +L N KA +FE+
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 492 -------------------TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
T + + F S LKPD TY++M+ T
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488
Query: 533 FEYVYKGMALSG 544
E +Y M G
Sbjct: 489 VEALYTKMKQEG 500
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 184/446 (41%), Gaps = 49/446 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL + + +AMS L + ++ + + Y LL+ K + RI N+M+
Sbjct: 113 MISGLMEASYFDEAMSFL---HRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMM 169
Query: 256 -EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKNW---DP 308
E CN P+ + ++S+ + KL+ RM P + N+ + +
Sbjct: 170 TEGCN--PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 227
Query: 309 VLEPDLV-----VY------NAVLNA--------CVPS-HQWKGVFWVFKQLRKSGLKPS 348
+ PDL+ +Y N VLN C+ ++ F + K++ + G P
Sbjct: 228 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPD 287
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
+TY ++ K+ +A + M+ GV Y L C
Sbjct: 288 TSTY------------SKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 335
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 467
G + A + E+++S+ S P +T+T LI + + + IF M D C PN
Sbjct: 336 AGLIEQAQWLFEEMRSVGCS-PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 394
Query: 468 TVNAMLKVYSRNDMFSKAKELFEE---TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
T A++ + SKA E++ + T+ + S + F D L P+ TY ++++
Sbjct: 395 TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGL 454
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
AH+ ++ + M SGC+ + + L+ +AGK + F + + G +P
Sbjct: 455 CKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSV 514
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAM 610
+T ++ + + A+ +++ M
Sbjct: 515 HTYTSLIDRMFKDGRLDLAMKVLSQM 540
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 20/185 (10%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
EP+ +VY+A+++ + + VF Q+ K G PS TY L+
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTY------------TSLIDR 523
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK- 429
+++G+++ A+ + M + Y + LC G + A+ K+ SL K
Sbjct: 524 MFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL----KLLSLMEEKG 579
Query: 430 --PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
P +T+T LI G ID + +F M + C PN T ++ + KA+
Sbjct: 580 CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 639
Query: 487 ELFEE 491
L E
Sbjct: 640 LLLGE 644
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 37/213 (17%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
L S YT L+ + K GR A+++ + ML+D + P++ Y ++ L ++G ++ +
Sbjct: 511 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD-SCTPNVVTYTAMIDGLCRIGESEKAL 569
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
KL+ M +K P++V Y A+++ + + +F Q+ + G
Sbjct: 570 KLLSLMEEKGC---------------SPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614
Query: 345 LKPSAATYGLAMESY--------RRCLLKVLVRAFWE----------EGKINEAVAA--- 383
P+ TY + + R LL + + +W +G +A+
Sbjct: 615 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGI 674
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
+ ME G V A VY L C GR + AM
Sbjct: 675 LEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAM 707
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 74/411 (18%), Positives = 142/411 (34%), Gaps = 66/411 (16%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L G+ +A ++ M+ PD + Y V L +++ L + M+
Sbjct: 263 LCGVGKFDKAFQLIKEMMRK-GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG--- 318
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+ PD+ Y ++++ + + W+F+++R G P+ TY
Sbjct: 319 ------------VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY----- 361
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
L+ A+ + ++ +A M G Y L LC G A
Sbjct: 362 -------TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 414
Query: 418 VVEKIKSL--------------RHSKPLEITFTGLIISSMDGGH-IDDCISIFQHM-KDH 461
V K+ RH+ + G ++ + H +D + M
Sbjct: 415 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 474
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN--SSGYTFLS------GDGA----- 508
CEPN +A++ + + A+E+F + T+ S +T+ S DG
Sbjct: 475 CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 534
Query: 509 ---------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 559
P+ TY++M++ + E + M GC + + L+
Sbjct: 535 KVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 594
Query: 560 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+AGK L F + G P+ + + ++ +KA L+ M
Sbjct: 595 GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 105/494 (21%), Positives = 186/494 (37%), Gaps = 80/494 (16%)
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A S+L +V K K S V+T +L G H++ +F++++ N Y D +
Sbjct: 121 EAQSLLQFVVSRKGKNSASS--VFTSVLEARGT----HQSNLVFSVLM---NAYTDSGYF 171
Query: 268 ------------HSVAVTLGQVG-LLKELVKLIERMRQKPSKRIKNMHRKNW-------D 307
H++ + G L L+KL N+ W D
Sbjct: 172 SDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKL-------------NLTSPAWAFYEEILD 218
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
PD+ +N +++ H+ +F ++ K GL+P+ ++ L
Sbjct: 219 CGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSF------------NTL 266
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLR 426
+ + + G +++ R M + V Y L LC G+ DA L +E R
Sbjct: 267 INGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCD--R 324
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
P ++TFT LI G D + I+Q M + +P++ T N ++ + +A
Sbjct: 325 GLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREA 384
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
K+L E T+ LKPD++TY+ +++ E + K M G
Sbjct: 385 KKLVIEMTQRG-------------LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGI 431
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
+LD L+ R G+ E +LEAG P +T ++ + + +
Sbjct: 432 ELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFK 491
Query: 606 LINAM---AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSR 662
L+ M + P +T + L + LL+A+ N +IT + L
Sbjct: 492 LLKEMQCDGHVPGVVT---YNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNIL-- 546
Query: 663 ALHALCRSEKERDL 676
L C+ D
Sbjct: 547 -LEGHCKHGNREDF 559
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/391 (19%), Positives = 155/391 (39%), Gaps = 51/391 (13%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
R +A+ + + M+E PD + ++ L E V L++RM Q+
Sbjct: 132 RISDAVALVDQMVE-MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC------- 183
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES---Y 359
+P+LV Y V+N + ++ + ++ + ++S Y
Sbjct: 184 --------QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKY 235
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLV 418
R +++A+ + ME +G+ Y L CLC+ GRW DA L+
Sbjct: 236 RH---------------VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 280
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 477
+ I+ + P +TF LI + + G + ++ M K +P+I T N+++ +
Sbjct: 281 SDMIE--KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 338
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+D KAK++FE + PD TY+++++ + + E ++
Sbjct: 339 MHDRLDKAKQMFEFMVSKDCF-------------PDVVTYNTLIKGFCKSKRVEDGTELF 385
Query: 538 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 597
+ M+ G D + L+ G C + F ++ G P + ++ +L
Sbjct: 386 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 445
Query: 598 SNYEKAVALINAMAYAPFHITERQWTELFES 628
EKA+ + + M + + +T + E
Sbjct: 446 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 476
Score = 42.7 bits (99), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 34/207 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L G A ++F M+ D + PDI Y + L G L++ +++ + M
Sbjct: 400 YTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 458
Query: 291 RQKPSK--------RIKNMHR-----KNWDPV-------LEPDLVVYNAVLNACVPSHQW 330
++ K I+ M + WD ++P++V YN +++
Sbjct: 459 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 518
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
+ + + K++++ G P++ TY L+RA +G + +R M
Sbjct: 519 QEAYALLKKMKEDGPLPNSGTY------------NTLIRAHLRDGDKAASAELIREMRSC 566
Query: 391 GVVGTASVYYELACCLCNNGRWQDAML 417
VG AS +A L ++GR + L
Sbjct: 567 RFVGDASTIGLVANML-HDGRLDKSFL 592
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 170/402 (42%), Gaps = 30/402 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L G QA V + +K K + + YT L+ + GKAGR + L F+ M+
Sbjct: 169 LLDALAKAGMVDQAFQVFE---DMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMV 225
Query: 256 -EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV-LEPD 313
+ C L ++ A++++ LG+ ++ +++ ++ +M + + + + D + E
Sbjct: 226 SKGCVL--NLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQ 283
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM----ESYRRCLLKVLVR 369
L N VL+ C ++ K L KSG A M E R ++
Sbjct: 284 LHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLE 343
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
K EA+ + M ++G+V +Y + L G+ + + ++ +
Sbjct: 344 VLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSAL---GKLKQVSFISNLFDKMKTNG 400
Query: 430 PLEITFTGLIISSMDG--GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAK 486
+ FT I+ S G G +D +F+ M+ C+P++ T N+++ ++ +A
Sbjct: 401 IIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAH 460
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
LF+E GY PD +TYS ++E +++ E ++ M GC
Sbjct: 461 MLFKEM---QEKGY----------DPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCT 507
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ + LL R GK ++++ + G IP + ++
Sbjct: 508 PNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYS 549
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 97/223 (43%), Gaps = 24/223 (10%)
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
+ + +A +++ L E T + + +M + G++ G + LG +Q
Sbjct: 332 KGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALG---KLKQVSF 388
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
+ + +K + F Y +++ G+ G +A +F +M E + PD+ Y+S+
Sbjct: 389 ISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVM-EASSCKPDVVTYNSLI 447
Query: 272 VTLGQVGLLKELVKLIERMRQKP--------SKRIKNMHRKN--------WDPVLE---- 311
LG+ G L E L + M++K S I+ + N +D ++
Sbjct: 448 NCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCT 507
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
P++V YN +L+ + + +++ +++ GL P + TY +
Sbjct: 508 PNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSI 550
>gi|357125724|ref|XP_003564540.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Brachypodium distachyon]
Length = 652
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 140/312 (44%), Gaps = 37/312 (11%)
Query: 302 HRKNWDPVLE-----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
H + P++E PDLV+++ +++ + +F +LR +G++P Y A+
Sbjct: 171 HALTFLPLMEADAVSPDLVLFSNLIHLALRGGDAPRALALFSRLRAAGIRPDLKAYNAAI 230
Query: 357 ESYRRC-LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+Y + LL+ R + ++ GV A Y + L GR A
Sbjct: 231 AAYCKSDLLRDAKRLL------------LHDIPADGVAPDAESYSPILAALARRGRHLAA 278
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID---DCISIFQHMK-DHCEPNIGTVNA 471
+ + ++++ KP +++ +++++ G +D + +F M+ P++ T N
Sbjct: 279 VSLFSHMRAVARVKP-DLSVFNIVLNAY--GQLDLAREADRLFWSMRRTGVPPSVVTYNT 335
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
ML+VY +F +A LF + S G +G+ +KP+ TY++++ + + E
Sbjct: 336 MLRVYGDAGLFGEAVHLFGLMCSSASDG------NGSSVKPNVVTYNTIISIHGKSLEDE 389
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + M +G Q + ++ +L +AGK F+ LLE+G P+ + M+
Sbjct: 390 KAGSLVRDMQANGIQPNAVTYSTILSIWVKAGKLDRAAKLFEKLLESGTEIDPVLYQTMV 449
Query: 592 IQAIVQSNYEKA 603
+ YE+A
Sbjct: 450 VA------YERA 455
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 140/354 (39%), Gaps = 57/354 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ +LA L + GR A+ +F+ M + PD++ ++ V GQ+ L +E +L M
Sbjct: 262 YSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIVLNAYGQLDLAREADRLFWSM 321
Query: 291 RQK---PSKRIKN-MHRKNWDPVL-----------------------EPDLVVYNAVLNA 323
R+ PS N M R D L +P++V YN +++
Sbjct: 322 RRTGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMCSSASDGNGSSVKPNVVTYNTIISI 381
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
S + + + + ++ +G++P+A TY +L + V+A GK++ A
Sbjct: 382 HGKSLEDEKAGSLVRDMQANGIQPNAVTYS--------TILSIWVKA----GKLDRAAKL 429
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 443
+ + G +Y + G A ++ ++K P E + L
Sbjct: 430 FEKLLESGTEIDPVLYQTMVVAYERAGLVSQAKRLLRELKDPAEGIPTETAISIL----A 485
Query: 444 DGGHIDDCISIFQHMKDHCEPNIGTVN-AMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
+ G +++ +F+ + E +V+ AM+ ++++N E+F+E +
Sbjct: 486 NAGRVEEAAWLFRRAVNTGEVRDPSVHRAMMDLFAKNRRHRSVVEVFDEMRKLGH----- 540
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
PD T ++ + A +++ +Y+ GC H +L
Sbjct: 541 --------LPDSETIATAMNAYGKLKEFDKAAMLYRASREEGCVFSDRVHFQML 586
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 129/346 (37%), Gaps = 54/346 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y+ LLA L +AG AL LM D + PD+ + ++ + G + L
Sbjct: 154 FSYSTLLAALTRAGHLDHALTFLPLMEADA-VSPDLVLFSNLIHLALRGGDAPRALALFS 212
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV-FWVFKQLRKSGLKP 347
R+R + PDL YNA + A S + + + G+ P
Sbjct: 213 RLRAAG---------------IRPDLKAYNAAIAAYCKSDLLRDAKRLLLHDIPADGVAP 257
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
A +Y ++ A G+ AV+ +M R V L
Sbjct: 258 DAESY------------SPILAALARRGRHLAAVSLFSHM--RAVARVKPDLSVFNIVLN 303
Query: 408 NNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHM------- 458
G+ A S+R + P +T+ ++ D G + + +F M
Sbjct: 304 AYGQLDLAREADRLFWSMRRTGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMCSSASDG 363
Query: 459 -KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
+PN+ T N ++ ++ ++ KA L + +AN ++P+ TY
Sbjct: 364 NGSSVKPNVVTYNTIISIHGKSLEDEKAGSLVRD-MQANG------------IQPNAVTY 410
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
S++L A + + +++ + SG ++D + ++V RAG
Sbjct: 411 STILSIWVKAGKLDRAAKLFEKLLESGTEIDPVLYQTMVVAYERAG 456
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 150/365 (41%), Gaps = 79/365 (21%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ YT+L+ LGKAGR EA + ML D L PD+ +++ LG+VG ++EL +
Sbjct: 304 YTYTELIKGLGKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNILGKVGRVEELTNVFS 362
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS--HQWKGVFWVFKQLRKSGLK 346
M M R P +V YN V+ A S H + W F +++ +
Sbjct: 363 EM---------GMWR------CTPTVVSYNTVIKALFESKAHVSEVSSW-FDKMKADSVS 406
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
PS TY +L+ + + ++ +A+ + M+++G + Y L L
Sbjct: 407 PSEFTYS------------ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINAL 454
Query: 407 CNNGRWQDAMLVVEKIKS-------------LRH---------------------SKPLE 432
R++ A + +++K ++H S P
Sbjct: 455 GKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDV 514
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+ L+ + G I++ S+ + M+++ C +I + N +L ++R + +A E+FE
Sbjct: 515 YAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFET 574
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
+ +KPD TY+++L A A +E + + M G + D
Sbjct: 575 IKHSG-------------IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAIT 621
Query: 552 HAWLL 556
++ +L
Sbjct: 622 YSSIL 626
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 14/214 (6%)
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
+L LV+A +++A++ + R T+S Y + L G+ + V ++
Sbjct: 164 VLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDM 481
+ P IT++ LI S G D I +F MKD+C +P +L +Y +
Sbjct: 224 CNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGK 283
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
KA +LFEE RA S P YTY+ +++ A + + YK M
Sbjct: 284 VEKALDLFEEMKRAGCS-------------PTVYTYTELIKGLGKAGRVDEAYGFYKDML 330
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
G D L+ + G+ L + F +
Sbjct: 331 RDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEM 364
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 87/213 (40%), Gaps = 24/213 (11%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKE---L 470
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+ S VY ++ GK G+ EA+ +FN M ++ PD+ AY+++ + + G+
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEM-KNQGSGPDVYAYNALMSGMVKAGM 529
Query: 280 LKELVKLIERMRQKPSKRIKNMHR----------------KNWDPV----LEPDLVVYNA 319
+ E L+ +M + + N H + ++ + ++PD V YN
Sbjct: 530 INEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNT 589
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+L + ++ + ++++ G + A TY
Sbjct: 590 LLGCFAHAGMFEEAARMMREMKDKGFEYDAITY 622
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 172/403 (42%), Gaps = 47/403 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ L K GR EA +IF+ M++ + P+ A Y ++ G L ++ L++
Sbjct: 309 FTYNTLMGYLCKNGRSMEARKIFDSMVKRGH-KPNSATYGTLLHGYATEGSLVKMHHLLD 367
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M ++N ++PD ++N ++ + +F ++R+ GL P
Sbjct: 368 MM-------VRNG--------IQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPD 412
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TYG+ M++ C++ GK+++A+A + G+ A V+ L LC
Sbjct: 413 TVTYGIVMDAL--CMV----------GKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCA 460
Query: 409 NGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
+W A L VE I R P I F L+ G + +IF M + + ++
Sbjct: 461 RDKWDKAEELAVEMIG--RGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDV 518
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T N ++ Y + +A +L E DG +KP+E TY++M+
Sbjct: 519 ITYNTLIDGYCLHGKVDEAAKLLEGMVL-----------DG--VKPNEVTYNTMINGYCK 565
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
+ E +++ MA G ++ +L +A + + + ++++G I +
Sbjct: 566 NGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSG-IKFDIG 624
Query: 587 FTEMLIQAIVQSN-YEKAVALINAMAYAPFHITERQWTELFES 628
+++ + Q+N + A+ + + FH+ R + + ++
Sbjct: 625 TYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDA 667
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 134/336 (39%), Gaps = 53/336 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR---FVYTKLLAILGKAGRPHEALRIFN 252
LLK L DK +AM + L+ L F YT LL L R +AL + +
Sbjct: 132 LLKALCDKKRTSEAMDI-----ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLH 186
Query: 253 LML--EDC--NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP 308
M+ +D PD+ +Y++V GLL+E +L ++ + D
Sbjct: 187 TMMVADDTRGGYPPDVVSYNTVIN-----GLLREGRQL---------DTAYHLFDQMLDQ 232
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLV 368
L PD+V YN++++A + V ++ K+G P+ T+ L+
Sbjct: 233 GLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITH------------NSLL 280
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
+ GK N+A+ + M + GV Y L LC NGR +A + + + H
Sbjct: 281 HGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGH- 339
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
KP T+ L+ G + + M ++ +P+ N ++ Y+++ A
Sbjct: 340 KPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAML 399
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
LF + R L PD TY +++A
Sbjct: 400 LFSKMRRQG-------------LNPDTVTYGIVMDA 422
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 118/291 (40%), Gaps = 32/291 (10%)
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
P + P+L+ Y+ V++ C F ++ +SG A T+ L
Sbjct: 85 PKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITF------------SPL 132
Query: 368 VRAFWEEGKINEAV-AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI---K 423
++A ++ + +EA+ A+R M G Y L LC+ R Q A+ ++ +
Sbjct: 133 LKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVAD 192
Query: 424 SLRHSKPLEITFTGLIISSM--DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 480
R P ++ +I+ + +G +D +F M D P++ T N+++ S+
Sbjct: 193 DTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKAR 252
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
KA + + +GA P+ T++S+L ++ + V+K M
Sbjct: 253 AMDKAAVVLVRMVK-----------NGA--MPNRITHNSLLHGYCSSGKPNDAIGVFKRM 299
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
G + D + L+ + G+ FDS+++ G P+ + +L
Sbjct: 300 CRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLL 350
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 171/448 (38%), Gaps = 60/448 (13%)
Query: 124 LNWVLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMN 182
LN +++ +G F +V KR + + + L+ L + K F +
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156
Query: 183 QSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAG 242
G + L+ G+ G R A+ +L + G K +++ +Y+ ++ L K
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVE---MYSTIIDALCKYQ 213
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
EA +F+ M + D+ Y ++ G LKE + L+ M K
Sbjct: 214 LVSEAYGLFSEMTVK-GISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK--------- 263
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
+ P++ YN +++A + K V + K+ +KP TY M+ Y
Sbjct: 264 ------TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLV 317
Query: 363 L-----------------------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+L+ F + ++EA+ + M Q+ +V Y
Sbjct: 318 YEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTY 377
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHM 458
L LC +GR ++++++ +P + IT++ LI GH+D I++F M
Sbjct: 378 SSLIDGLCKSGRIPYVWDLIDEMRD--RGQPADVITYSSLIDGLCKNGHLDRAIALFNKM 435
Query: 459 KDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
KD PNI T +L + A+E+F++ + GY + YTY
Sbjct: 436 KDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLL---TKGYHL----------NVYTY 482
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGC 545
+ M+ E + M +GC
Sbjct: 483 NVMINGHCKQGLLEEALTMLSKMEDNGC 510
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 132/324 (40%), Gaps = 31/324 (9%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
D VL P + N L + V + +++ +F ++ +SGL+P YG A
Sbjct: 141 DGVL-PSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKA----------- 188
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
++A + G + A+ + M++ GV VY + LC R +DA + +++ R
Sbjct: 189 -IQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLD-R 246
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKA 485
P IT+ LI G +++ +I + MK ++ EP I T N++L R M +A
Sbjct: 247 RVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEA 306
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+ + EE Y F+ PD +TY+++ + + + + G
Sbjct: 307 QRVLEEMEV-----YGFV--------PDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGV 353
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
Q+ + LL + G E LE G P +FF ++ + KA
Sbjct: 354 QILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYT 413
Query: 606 LI---NAMAYAPFHITERQWTELF 626
I A+ P H+T + F
Sbjct: 414 TIEKMEAVGLRPNHVTYNSLVKKF 437
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/420 (20%), Positives = 170/420 (40%), Gaps = 70/420 (16%)
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI 264
+ R+ + +LD+ + LL L K G +A + LE+ L P
Sbjct: 348 AVRKGVQILDYTCSI--------------LLNALCKEGNMEKAEEVLKKFLEN-GLAPVG 392
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSK-----------RIKNMH------RK 304
++++ QVG + + IE+M +P+ +KNM +K
Sbjct: 393 VFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKK 452
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL 364
+ + P++ YN +++ S + F + +++ K GLKP+ +YG CL+
Sbjct: 453 MVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYG--------CLI 504
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
L + + I EA + +M RGVV A +Y L C G+ +DA +++ +
Sbjct: 505 NCLCK----DANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVA 560
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFS 483
R P +T+ LI G + + ++ + + ++ T N+++ YS
Sbjct: 561 -REIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQ 619
Query: 484 KAKELFEETTRAN-----SSGYTFLSGDGAP----------------LKPDEYTYSSMLE 522
KA EL+E ++ ++ + ++G G L PD Y++++
Sbjct: 620 KALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIH 679
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ ++ M G Q D+ + L++ + G+ H +++ + + G IP
Sbjct: 680 CYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIP 739
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/393 (19%), Positives = 156/393 (39%), Gaps = 55/393 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
FVY ++ L K R +A ++F+ ML D + P+ Y+++ +VG L+E + E
Sbjct: 218 FVYNVVIGGLCKEKRMKDAEKLFDEML-DRRVAPNRITYNTLIDGYCKVGQLEEAFNIRE 276
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
RM+ ++N +EP ++ +N++LN + + V +++ G P
Sbjct: 277 RMK------VEN---------VEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPD 321
Query: 349 AATYGLAMESYRRC-----------------------LLKVLVRAFWEEGKINEAVAAVR 385
TY + + +C +L+ A +EG + +A ++
Sbjct: 322 RFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLK 381
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
+ G+ + + C G A +EK++++ +P +T+ L+ +
Sbjct: 382 KFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAV-GLRPNHVTYNSLVKKFCEM 440
Query: 446 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
++++ + M + PN+ T N ++ Y R+ +F + ++ EE +
Sbjct: 441 KNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKG-------- 492
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
LKP+ +Y ++ E + M G + + L+ + AGK
Sbjct: 493 -----LKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGK 547
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 597
FD ++ A EI L +LI + +
Sbjct: 548 LKDAFRFFDEMV-AREIVPTLVTYNILINGLCK 579
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL KG +A ++ + D+ Y L++ AG +AL ++ M
Sbjct: 573 LINGLCKKGKVMEAENLASEITRKGLSFDV---ITYNSLISGYSSAGNVQKALELYETM- 628
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + P + YH + G+ GL+ L+E++ Q+ M + N L PD V
Sbjct: 629 KKSGIKPTLNTYHRLIAGCGKEGLV-----LVEKIYQE-------MLQMN----LVPDRV 672
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+YNA+++ V + + + G++P TY L+ ++EG
Sbjct: 673 IYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTY------------NCLILGHFKEG 720
Query: 376 KINEAVAAVRNMEQRGVVGTASVY 399
++++ V +M+ RG++ Y
Sbjct: 721 RMHKVKNLVNDMKIRGLIPKTETY 744
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 121/325 (37%), Gaps = 52/325 (16%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
R + L++F+ ++E L PD Y ++G LK ++L+ M++
Sbjct: 162 RYEDTLQLFSEIVES-GLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGG-------- 212
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
+ P + VYN V+ + K +F ++ + P+ TY
Sbjct: 213 -------VSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITY---------- 255
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
L+ + + G++ EA M+ V T + L LC ++A V+E++
Sbjct: 256 --NTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEM 313
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISI--------FQHMKDHC---------EPN 465
+ + P T+T L + G++D I++ Q + C E N
Sbjct: 314 E-VYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGN 372
Query: 466 IGTVNAMLKVYSRNDM------FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
+ +LK + N + F+ + + N + T + L+P+ TY+S
Sbjct: 373 MEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNS 432
Query: 520 MLEASATAHQWEYFEYVYKGMALSG 544
+++ E E K M G
Sbjct: 433 LVKKFCEMKNMEEAEKCIKKMVEKG 457
>gi|115443739|ref|NP_001045649.1| Os02g0110400 [Oryza sativa Japonica Group]
gi|41052925|dbj|BAD07836.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535180|dbj|BAF07563.1| Os02g0110400 [Oryza sativa Japonica Group]
gi|215706484|dbj|BAG93340.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622028|gb|EEE56160.1| hypothetical protein OsJ_05062 [Oryza sativa Japonica Group]
Length = 747
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 116/566 (20%), Positives = 221/566 (39%), Gaps = 89/566 (15%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
++ Y +L + GR A RI+N M+ D + PD++ Y+++ G ++ ++
Sbjct: 205 RTALSYNAVLKAILCRGREAMARRIYNAMIADA-VTPDLSTYNTLIWGFGLCKKMEAALR 263
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ M+ D + PD+ YN +LNA V + + VF ++ +G
Sbjct: 264 VFGDMK---------------DHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMPGAGF 308
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
++ +Y V+++ + E GK+ EAV M ++G+ + + L
Sbjct: 309 AQNSVSY------------NVMIKGYVEAGKVEEAVGLFSEMGEKGLRLSEKTFAALMPG 356
Query: 406 LCNN-GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI------FQH- 457
LC++ GR +A ++ + R + + F L+ + G +D + + F+H
Sbjct: 357 LCDDEGRVVEARKAMDDMAERRLTPKDKSVFLRLVTTLCRAGDLDGALDVHQKSGQFKHV 416
Query: 458 ----------MKDHCEPNI--GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
M+ C G V M ++ + + S + E A + +L
Sbjct: 417 LVDPRQYGVLMESLCAGGKCDGAVEVMDELLEKGTLLSPKSPVLEGP--AYNPVIEYLCS 474
Query: 506 DGAPLKP-------------DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
+G K D+ ++S++ A E + + M G + D H
Sbjct: 475 NGNTSKAETFFRQLMKKGVDDKAAFNSLIRGHAKEGVPEAAQEILAIMTRRGVRTDPESH 534
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 612
A L+ + + + A DS++E G +P P F +++ + A ++ +M
Sbjct: 535 ALLVDSFLKKNEPADAKTALDSMMEQGHVPSPSLFMSVMVALFNSGRVQTASRVMKSM-- 592
Query: 613 APFHITERQWTELFESNEDRISRDKLEKLL------NALCNCNAASSEITVSNLSRALHA 666
E+ TE N D ++ LE L A+ N + +L + L A
Sbjct: 593 -----IEKGVTE----NMD-MAHKILEALFMRGHVEEAIGRVNLMVENGCLPDLDKLLIA 642
Query: 667 LCRSEKERDLSSSAHFGSQA---IDISPLHGIHEAFDVKETENVPSSSASMMFENADLGA 723
LC ++K + A F + S + EA +E + +P+ S +N
Sbjct: 643 LCENDKVMEAHKLADFALDRDFDVSFSTYDRVLEALYTEE-KTLPAYSMLCKIKNKGGVV 701
Query: 724 DPLPQKTDVAVDIDSINHSSLSRQAD 749
D QK A+ +DS+ S+QAD
Sbjct: 702 D---QKGCDAL-MDSLKAGGYSKQAD 723
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/380 (19%), Positives = 159/380 (41%), Gaps = 54/380 (14%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M +SG+ E L+ + G W A VL ++ + + +V++++LA
Sbjct: 352 MERSGVSPDECTYSLLIDAYSNAGRWESARIVLK---EMEANNIMPNSYVFSRILASYRD 408
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G ++ ++ M ++ + PD Y+ + T G+ L + ++M +
Sbjct: 409 RGEWQKSFQVLKEM-KNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEG------ 461
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
++PD V +N +++ + + +F+++ + G P T+
Sbjct: 462 ---------IQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFN------- 505
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
+++ +F E+ + ++ + NM G++ Y L +GR+ DA+ +E
Sbjct: 506 -----IMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLE 560
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRN 479
+KS KP + LI + G + ++ F+ M+ D +P++ +N+++ + +
Sbjct: 561 DMKS-AGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGED 619
Query: 480 ----DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
+ FS K + E LKPD TY+++++A ++
Sbjct: 620 RRDAEAFSVLKYMKEND-----------------LKPDVVTYTTLMKALIRVDKFNKVPS 662
Query: 536 VYKGMALSGCQLDQTKHAWL 555
VY+ M L+GC D+ A L
Sbjct: 663 VYEEMILAGCTPDRKARAML 682
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 146/369 (39%), Gaps = 45/369 (12%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
KAG P++A+ M++ L P A +V LG G + E + E M+
Sbjct: 266 FAKAGDPNKAMEFLG-MVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMK------ 318
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
D L+P YN +L V + K ++ ++ +SG+ P TY L ++
Sbjct: 319 ---------DNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLID 369
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
+Y WE +I ++ ME ++ + V+ + + G WQ +
Sbjct: 370 AYSNA-------GRWESARI-----VLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQ 417
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVY 476
V++++K+ +P + +I + +D + F M + +P+ T N ++ +
Sbjct: 418 VLKEMKN-SGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCH 476
Query: 477 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
+ ++ +A+ELFEE S P T++ M+ + +W+ + +
Sbjct: 477 CKAELHERAEELFEEMMEKGFS-------------PCVTTFNIMINSFGEQERWDDVKTL 523
Query: 537 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 596
M G + + L+ ++G+ + + AG P + LI A
Sbjct: 524 MGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNA-LINAYA 582
Query: 597 QSNY-EKAV 604
Q E+AV
Sbjct: 583 QKGLSEQAV 591
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 29/229 (12%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC--LLKVLVRAFW 372
+ YNA++NAC ++ + + ++R+ G Y L ++S R + +++ +
Sbjct: 185 LTYNALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLY 244
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
E + ++ V+ + +VG A G AM + +++ S P
Sbjct: 245 SEIQCDKLELDVQ-LSNDIIVGFAKA-----------GDPNKAMEFLGMVQASGLS-PRT 291
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
T +I + D G I + +IF+ MKD+ +P N +LK Y + M A+ + E
Sbjct: 292 ATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSE 351
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
R+ S PDE TYS +++A + A +WE V K M
Sbjct: 352 MERSGVS-------------PDECTYSLLIDAYSNAGRWESARIVLKEM 387
>gi|449457341|ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
gi|449523938|ref|XP_004168980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 176/454 (38%), Gaps = 101/454 (22%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D L++ W + M+ G L L++ L G RQA+ D + GL
Sbjct: 107 ILLDILAKVRQFDAAWHLILQMDHKG----TDTFLLLIRRLISSGRTRQAIRAFDDIEGL 162
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ F Y LL +L K G A+ +FN E+ + D+ Y + ++G
Sbjct: 163 TGNKVGIDDFCY--LLDVLCKYGYVKVAVEVFNKRKEEFGV--DVKIYTILIYGWCKIGR 218
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV--PSHQWKGVF--- 334
+ + ++ M ++ +EP++V YN +LN S +G F
Sbjct: 219 FEMAERFLKDMVERG---------------IEPNVVTYNVLLNGVCRRASLHPEGRFEKT 263
Query: 335 -----WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
VF ++RK G++P ++ + + Y R K ++ ++ M++
Sbjct: 264 IRHAEKVFDEMRKRGIEPDVTSFSIVLHVYSRA------------HKPELSLDKLKQMKE 311
Query: 390 RGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEIT-FTGLIISSMDGGH 447
G+ T + Y + CLC+ GR +D L+ E ++S P F DG
Sbjct: 312 LGISPTVATYTSVIKCLCSCGRLEDGENLIEEMVRSGISPSPTTYNCFFKEYRGRKDGA- 370
Query: 448 IDDCISIFQHMKDHC--EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
+ +++ M++ C P++ T N +L ++ D KEL+ + SG
Sbjct: 371 --GALRLYKKMREDCLCAPSLHTYNILLALFLNLDKKETLKELWNDMKE---------SG 419
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
G PD +Y++++ +W CQ
Sbjct: 420 VG----PDLDSYTTIIHGLCEKQRWS-----------EACQF------------------ 446
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
F ++E G +P + F EML + ++QS+
Sbjct: 447 ------FVEMIERGFLPQKVTF-EMLYRGLIQSD 473
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 82/217 (37%), Gaps = 32/217 (14%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
++ +L + +A +P +L M ++ + P +A Y SV L G L++ LIE M
Sbjct: 286 FSIVLHVYSRAHKPELSLDKLKQM-KELGISPTVATYTSVIKCLCSCGRLEDGENLIEEM 344
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL-KPSA 349
+ + P YN G ++K++R+ L PS
Sbjct: 345 VRSG---------------ISPSPTTYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSL 389
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY + + + K ++ W +M++ GV Y + LC
Sbjct: 390 HTYNILLALFLNLDKKETLKELWN------------DMKESGVGPDLDSYTTIIHGLCEK 437
Query: 410 GRWQDA-MLVVEKIKS--LRHSKPLEITFTGLIISSM 443
RW +A VE I+ L E+ + GLI S M
Sbjct: 438 QRWSEACQFFVEMIERGFLPQKVTFEMLYRGLIQSDM 474
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 170/402 (42%), Gaps = 30/402 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L G QA V + +K K + + YT L+ + GKAGR + L F+ M+
Sbjct: 227 LLDALAKAGMVDQAFQVFE---DMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMV 283
Query: 256 -EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV-LEPD 313
+ C L ++ A++++ LG+ ++ +++ ++ +M + + + + D + E
Sbjct: 284 SKGCVL--NLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQ 341
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM----ESYRRCLLKVLVR 369
L N VL+ C ++ K L KSG A M E R ++
Sbjct: 342 LHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLE 401
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
K EA+ + M ++G+V +Y + L G+ + + ++ +
Sbjct: 402 VLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSAL---GKLKQVSFISNLFDKMKTNG 458
Query: 430 PLEITFTGLIISSMDG--GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAK 486
+ FT I+ S G G +D +F+ M+ C+P++ T N+++ ++ +A
Sbjct: 459 IIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAH 518
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
LF+E GY PD +TYS ++E +++ E ++ M GC
Sbjct: 519 MLFKEM---QEKGY----------DPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCT 565
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ + LL R GK ++++ + G IP + ++
Sbjct: 566 PNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYS 607
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 97/223 (43%), Gaps = 24/223 (10%)
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
+ + +A +++ L E T + + +M + G++ G + LG +Q
Sbjct: 390 KGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALG---KLKQVSF 446
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
+ + +K + F Y +++ G+ G +A +F +M E + PD+ Y+S+
Sbjct: 447 ISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVM-EASSCKPDVVTYNSLI 505
Query: 272 VTLGQVGLLKELVKLIERMRQKP--------SKRIKNMHRKN--------WDPVLE---- 311
LG+ G L E L + M++K S I+ + N +D ++
Sbjct: 506 NCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCT 565
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
P++V YN +L+ + + +++ +++ GL P + TY +
Sbjct: 566 PNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSI 608
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 148/354 (41%), Gaps = 38/354 (10%)
Query: 155 AEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
A++ ++VD L + + W + M + G + + M K+++ L W +A+
Sbjct: 225 ADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFH 284
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
+ +D K+ V LL L K A +F + + PD +++++
Sbjct: 285 KMDRFGVVKDTKAMNV---LLDTLCKERSVKRARGVFQELRG--TIPPDENSFNTLVHGW 339
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ +LKE + +E M+Q P +V Y +++ A ++ V+
Sbjct: 340 CKARMLKEALDTMEEMKQHG---------------FSPSVVTYTSLVEAYCMEKDFQTVY 384
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
+ ++RK P+ TY +L+ A + G+ EA+ +++ GV
Sbjct: 385 ALLDEMRKRRCPPNVVTY------------TILMHALGKAGRTREALDTFDKLKEDGVAP 432
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
AS Y L L GR +DA VVE++++ + P TF LI ++ D ++ + +
Sbjct: 433 DASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIA-PNVTTFNTLISAACDHSQAENALKL 491
Query: 455 FQHMKDH-CEPNIGTVNAMLKVYSRND----MFSKAKELFEETTRANSSGYTFL 503
M++ C P+I T +LK+ + + +F + + S YT L
Sbjct: 492 LVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLL 545
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 32/213 (15%)
Query: 216 VYGLKD----KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
VY L D +R + YT L+ LGKAGR EAL F+ + ED + PD + Y+S+
Sbjct: 383 VYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKED-GVAPDASFYNSLI 441
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
LG+ G L++ ++E MR + P++ +N +++A Q +
Sbjct: 442 YILGRAGRLEDAYSVVEEMRTTG---------------IAPNVTTFNTLISAACDHSQAE 486
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
+ ++ + P TY LLK+ + W + + V +M ++
Sbjct: 487 NALKLLVKMEEQSCNPDIKTYTP--------LLKLCCKRQW----VKILLFLVCHMFRKD 534
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
+ S Y L LC NG+ + L +E++ S
Sbjct: 535 ISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVS 567
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/391 (19%), Positives = 155/391 (39%), Gaps = 51/391 (13%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
R +A+ + + M+E PD + ++ L E V L++RM Q+
Sbjct: 170 RISDAVALVDQMVE-MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC------- 221
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES---Y 359
+P+LV Y V+N + ++ + ++ + ++S Y
Sbjct: 222 --------QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKY 273
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLV 418
R +++A+ + ME +G+ Y L CLC+ GRW DA L+
Sbjct: 274 RH---------------VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 477
+ I+ + P +TF LI + + G + ++ M K +P+I T N+++ +
Sbjct: 319 SDMIE--KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+D KAK++FE + PD TY+++++ + + E ++
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCF-------------PDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 538 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 597
+ M+ G D + L+ G C + F ++ G P + ++ +L
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Query: 598 SNYEKAVALINAMAYAPFHITERQWTELFES 628
EKA+ + + M + + +T + E
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 514
Score = 42.7 bits (99), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 34/207 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L G A ++F M+ D + PDI Y + L G L++ +++ + M
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 291 RQKPSK--------RIKNMHR-----KNWDPV-------LEPDLVVYNAVLNACVPSHQW 330
++ K I+ M + WD ++P++V YN +++
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
+ + + K++++ G P++ TY L+RA +G + +R M
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTY------------NTLIRAHLRDGDKAASAELIREMRSC 604
Query: 391 GVVGTASVYYELACCLCNNGRWQDAML 417
VG AS +A L ++GR + L
Sbjct: 605 RFVGDASTIGLVANML-HDGRLDKSFL 630
>gi|413944457|gb|AFW77106.1| hypothetical protein ZEAMMB73_510937 [Zea mays]
Length = 492
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 127/281 (45%), Gaps = 40/281 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y KL+ +LGK +P +A ++F M+++ P++ +Y ++ T + G +E L++R
Sbjct: 143 IYIKLITMLGKCKQPEKAHQLFQAMIDE-GCAPNLQSYTALVSTYSRSGRFREAFDLLDR 201
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ P +PD+ Y+ ++ +C+ ++ ++ V + + ++G+ P+
Sbjct: 202 MKDTPG--------------CQPDVQTYSILIKSCLHAYDFEKVKSLLADMARAGIPPNT 247
Query: 350 ATYGLAMESYRRC---------LLKVL--------------VRAFWEEGKINEAVAAVRN 386
TY +++Y + LLK+L +RAF G+I +
Sbjct: 248 VTYNTLIDAYGKAGRFAEMESTLLKMLSQNCKPDVWTMNSTLRAFGSSGQIETMESCYEK 307
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
+ G+V Y L ++ V+E ++ +S + +T+ +I + G
Sbjct: 308 FQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTI-VTYNVVIDAFGRAG 366
Query: 447 HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAK 486
++ IF+ MK + +PN T+ ++++ Y R K K
Sbjct: 367 DLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIK 407
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
RW A+ V E ++ KP + LI + +FQ M D C PN+ +
Sbjct: 120 RWDSALKVFELMRDQVWYKPHIGIYIKLITMLGKCKQPEKAHQLFQAMIDEGCAPNLQSY 179
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
A++ YSR+ F +A +L + D +PD TYS ++++ A+
Sbjct: 180 TALVSTYSRSGRFREAFDLLDRMK------------DTPGCQPDVQTYSILIKSCLHAYD 227
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
+E + + MA +G + + L+ +AG+ +E +L
Sbjct: 228 FEKVKSLLADMARAGIPPNTVTYNTLIDAYGKAGRFAEMESTLLKML 274
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 98/516 (18%), Positives = 201/516 (38%), Gaps = 84/516 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ L KG ++A+ V + ++ D F YT L+ + + +A +F+ M+
Sbjct: 203 MINILCKKGKVQEAVLVFNKIFQFDLCPD---AFTYTSLILGHCRNRKLDKAFEVFDRMV 259
Query: 256 ED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PS---------------- 295
+D CN P+ Y ++ L G + E + ++E M +K P+
Sbjct: 260 KDGCN--PNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGR 317
Query: 296 -----KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+++M +K P ++ Y A+++ + + + ++ ++ K GL P+
Sbjct: 318 VDDAINLVRSMGKKGCSPSVQ----TYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTV 373
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY L+ EG+ A+ ME G + A Y ++ L
Sbjct: 374 TY------------NALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMD 421
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTV 469
+ AM+V K+ S P +T+ LI+ ++ G++++ MK+ +CEP+ T
Sbjct: 422 DIEKAMVVFNKMLKDGPS-PTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTY 480
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
++ + + A F E + S P+++TY++M++ +
Sbjct: 481 CELISGFCKGGKLDSATSFFYEMLKCGIS-------------PNQWTYTAMIDGYCKEGK 527
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
+ +++ M +GC + ++ S+ + E + E G P+ + +T
Sbjct: 528 IDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTS 587
Query: 590 MLIQAIVQSNYEKAVALINAMAYAPFHITERQ--------WTELFESNEDRISRDKLEKL 641
LI + ++ +A+ FH E++ +T L D E+L
Sbjct: 588 -LINGLCKNTATN-------LAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL 639
Query: 642 LNALCNCNAASSEITVSNLSRALHALCRSEKERDLS 677
C E T+ S + LCR + + S
Sbjct: 640 TENGC-------EPTIDTYSTLVSGLCREGRSNEAS 668
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 167/428 (39%), Gaps = 61/428 (14%)
Query: 212 VLDWVYGLKDKRDLKSRFV---YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
V D+++G+ F + LL LGK A ++ + + P + ++
Sbjct: 143 VTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSS-GVKPSLLTFN 201
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L + G ++E V + ++ Q +D L PD Y +++ +
Sbjct: 202 TMINILCKKGKVQEAVLVFNKIFQ-------------FD--LCPDAFTYTSLILGHCRNR 246
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ F VF ++ K G P++ TY L+ EG+I EA+ + M
Sbjct: 247 KLDKAFEVFDRMVKDGCNPNSVTY------------STLINGLCNEGRIGEAMDMLEEMT 294
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
++G+ T Y LC+ GR DA+ +V + + P T+T +I G +
Sbjct: 295 EKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGK-KGCSPSVQTYTAIISGLFRAGKM 353
Query: 449 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE----ETTRANSSGYT-F 502
+ I ++ M K+ PN T NA++ F A ++F+ T AN+ Y
Sbjct: 354 ELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQI 413
Query: 503 LSG-------------------DGAPLKPDEYTYSSML-EASATAHQWEYFEYVYKGMAL 542
+ G DG P TY++++ E + ++Y M
Sbjct: 414 IKGLFGMDDIEKAMVVFNKMLKDGP--SPTVVTYNTLIVENLKRGYLNNATRFLYM-MKE 470
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
S C+ D+ + L+ + GK F +L+ G P+ +T M+ + +
Sbjct: 471 SNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDV 530
Query: 603 AVALINAM 610
A++L M
Sbjct: 531 ALSLFERM 538
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 97/477 (20%), Positives = 179/477 (37%), Gaps = 52/477 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L +G + A+ + DW+ G L + Y +++ L +A+ +FN ML
Sbjct: 378 LINELCTEGRFGIALKIFDWMEG---HGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKML 434
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+D P + Y+++ V + G L + + M++ EPD
Sbjct: 435 KD-GPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNC---------------EPDER 478
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y +++ + F ++ K G+ P+ TY ++ + +EG
Sbjct: 479 TYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTY------------TAMIDGYCKEG 526
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
KI+ A++ ME+ G + Y + L R+ +A K+ + +P IT+
Sbjct: 527 KIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTE-QGLQPNTITY 585
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
T LI + IF M K +C PN T +++ + A+ L E
Sbjct: 586 TSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGC- 644
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
+P TYS+++ + + + M G +
Sbjct: 645 ----------------EPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCS 688
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ-SNYEKAVALINAMAYA 613
LLV ++ K F+ + G PH LF ++LI A+ S E+A+ + ++
Sbjct: 689 LLVAHCKSLKVDCALEIFNLMAVKGFQPH-LFIYKVLICALCGVSRAEEALNIFQSLLKK 747
Query: 614 PFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRS 670
++ WT L + D K L + + N S T L+R L + +S
Sbjct: 748 QWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKS 804
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 119/302 (39%), Gaps = 39/302 (12%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
+F+ +M +S E +L+ G G A S + Y + +++ YT ++
Sbjct: 463 RFLYMMKESNCEPDERTYCELISGFCKGGKLDSATS---FFYEMLKCGISPNQWTYTAMI 519
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
K G+ AL +F M E+ I Y+++ L + E K +M ++
Sbjct: 520 DGYCKEGKIDVALSLFERMEEN-GCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQG- 577
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY--- 352
L+P+ + Y +++N + F +F ++ K P+A TY
Sbjct: 578 --------------LQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSL 623
Query: 353 --GLAME---------SYRRC-----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
GL E + C LV EG+ NEA V NM+++G+ +
Sbjct: 624 IYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSM 683
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
+Y L C + + D L + + +++ +P + LI + ++ ++IFQ
Sbjct: 684 EIYCSLLVAHCKSLK-VDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQ 742
Query: 457 HM 458
+
Sbjct: 743 SL 744
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 170/402 (42%), Gaps = 30/402 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L G QA V + +K K + + YT L+ + GKAGR + L F+ M+
Sbjct: 169 LLDALAKAGMVDQAFQVFE---DMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMV 225
Query: 256 -EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV-LEPD 313
+ C L ++ A++++ LG+ ++ +++ ++ +M + + + + D + E
Sbjct: 226 SKGCVL--NLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQ 283
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM----ESYRRCLLKVLVR 369
L N VL+ C ++ K L KSG A M E R ++
Sbjct: 284 LHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLE 343
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
K EA+ + M ++G+V +Y + L G+ + + ++ +
Sbjct: 344 VLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSAL---GKLKQVSFISNLFDKMKTNG 400
Query: 430 PLEITFTGLIISSMDG--GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAK 486
+ FT I+ S G G +D +F+ M+ C+P++ T N+++ ++ +A
Sbjct: 401 IIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAH 460
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
LF+E GY PD +TYS ++E +++ E ++ M GC
Sbjct: 461 MLFKEM---QEKGY----------DPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCT 507
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ + LL R GK ++++ + G IP + ++
Sbjct: 508 PNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYS 549
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 97/223 (43%), Gaps = 24/223 (10%)
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
+ + +A +++ L E T + + +M + G++ G + LG +Q
Sbjct: 332 KGDRDAFVSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALG---KLKQVSF 388
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
+ + +K + F Y +++ G+ G +A +F +M E + PD+ Y+S+
Sbjct: 389 ISNLFDKMKTNGIIPDVFTYNIMISSYGRVGLVDKASELFEVM-EASSCKPDVVTYNSLI 447
Query: 272 VTLGQVGLLKELVKLIERMRQKP--------SKRIKNMHRKN--------WDPVLE---- 311
LG+ G L E L + M++K S I+ + N +D ++
Sbjct: 448 NCLGKHGDLDEAHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCT 507
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
P++V YN +L+ + + +++ +++ GL P + TY +
Sbjct: 508 PNIVTYNILLDCLERRGKTEEAHKLYETMKQQGLIPDSITYSI 550
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 104/530 (19%), Positives = 199/530 (37%), Gaps = 95/530 (17%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
+R A LV L+ ++ + M+ SG + + L +G W A+
Sbjct: 200 YRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDAL 259
Query: 211 SVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY-PDIAAYH 268
+L+ + D K + T++++ L +A +EA+ + M CN Y P++ Y
Sbjct: 260 DLLE-------REDFKLDTVLCTQMISGLMEASLFNEAMSFLHRM--RCNSYIPNVVTYR 310
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L +++ + KRI NM P ++N++++ +
Sbjct: 311 TL------------LTGFLKKKQLGWCKRIINMMMTEG---CNPSPSLFNSLVHTYCNAE 355
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYG-------------------LAMESYRRCLLKVLV- 368
+ + +F ++ G P Y LA + Y L+ V
Sbjct: 356 DYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVL 415
Query: 369 ---------RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
R GK +A V+ M ++G V AS Y ++ LC R A L+
Sbjct: 416 NKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLF 475
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAML----- 473
+++K + P T+T LI S G I+ S F M+ C PN+ T A+L
Sbjct: 476 QEMKKV-GVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLK 534
Query: 474 --KVYSRNDMF----------------------------SKAKELFEE---TTRANSSGY 500
++Y ND+F KA E++ + T+ S +
Sbjct: 535 SKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDF 594
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
F D + P+ TY +++ A + + M +GC+ +Q + L+
Sbjct: 595 YFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFC 654
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ G+ + F + + G +P +T ++ + + A+ +++ M
Sbjct: 655 KVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 704
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 82/437 (18%), Positives = 147/437 (33%), Gaps = 86/437 (19%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
++A+LG P +R F A Y ++A LG ++ + ER+ ++
Sbjct: 104 VVAVLGAVRSPELCVRFFLWAERQVGYKHTGACYDALAEVLG----FEDPARTAERLLRE 159
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ +++ + + N ++ C W +L+ G +PSA TY
Sbjct: 160 IGEDDRDVLGR-----------LLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTY- 207
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
LV+ G++ A + M G S A LC GRW
Sbjct: 208 -----------NALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWG 256
Query: 414 DAM-------------LVVEKIKSLRHSK------------------PLEITFTGLIISS 442
DA+ L + I L + P +T+ L+
Sbjct: 257 DALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGF 316
Query: 443 MDGGHIDDCISIFQ-HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
+ + C I M + C P+ N+++ Y + ++ A +LF R N+ G
Sbjct: 317 LKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLF---NRMNTCGC- 372
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQ-------WEYFEYVYKGMALSGCQLDQTKHAW 554
P Y ++ S + + E VY+ M ++ C L++ A
Sbjct: 373 ----------PPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTAN 422
Query: 555 LLVEASRAGKCHLLEHAFD---SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
GK E AF ++ G +P +T+++ +KA L M
Sbjct: 423 FARCLCGVGK---FEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMK 479
Query: 612 YAPFHITERQWTELFES 628
+ +T L +S
Sbjct: 480 KVGVNPDVYTYTILIDS 496
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 70/363 (19%), Positives = 130/363 (35%), Gaps = 81/363 (22%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YTK++ L +A R +A +F M + + PD+ Y + + + GL+++ +
Sbjct: 454 TYTKVITFLCQAKRVDKAFLLFQEM-KKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDE 512
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
MR P++V Y A+L+A + S Q +F ++ P+A
Sbjct: 513 MRSAGC---------------SPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNA 557
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS-----VYYELAC 404
TY L+ + G+I +A + +GT+ Y+E
Sbjct: 558 ITY------------SALIDGLCKAGEIQKACEVYAKL-----IGTSDNIESDFYFE--- 597
Query: 405 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCE 463
G+ D + P +T+ L+ + D + M CE
Sbjct: 598 -----GKDTDTI------------SPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCE 640
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN--SSGYTFLS------GDGA------- 508
PN +A++ + + A+E+F T+ S +T+ S DG
Sbjct: 641 PNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 700
Query: 509 -------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
P+ TY++M++ + E + M GC + + L+ +
Sbjct: 701 LSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGK 760
Query: 562 AGK 564
AGK
Sbjct: 761 AGK 763
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 174/424 (41%), Gaps = 69/424 (16%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E+R R A +D S+ ++ M G++ G L++G +G+
Sbjct: 514 ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 573
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A SV ++ + +D+++ Y+ L+ L + G+ HEA IF+ L++ L P+ Y
Sbjct: 574 EAFSVFRFILSRRVLQDVQT---YSVLIHGLSRNGKMHEAFGIFS-ELQEKGLLPNAFTY 629
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+S+ + G + + +L+E M K + PD+V YN +++ +
Sbjct: 630 NSLISGSCKQGNVDKASQLLEEMCIKG---------------INPDIVTYNILIDGLCKA 674
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-----------------------LL 364
+ + +F + GL P+ TY ++ Y + +
Sbjct: 675 GEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIY 734
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
V++ +E K +A+ + M ++G T S + L C +G+ Q+A ++E++
Sbjct: 735 NVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIE 793
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFS 483
+ P +T+T LI + G + + ++ M++ + P T ++L Y S
Sbjct: 794 -KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMS 852
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
+ LFEE ++PD+ TY M++A Y +G +
Sbjct: 853 EVSALFEEMV-------------AKGIEPDKMTYYVMIDA-----------YCREGNVME 888
Query: 544 GCQL 547
C+L
Sbjct: 889 ACKL 892
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/439 (19%), Positives = 170/439 (38%), Gaps = 57/439 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +G QA + D + + +L ++ LL + KAG+ +AL I M+
Sbjct: 317 LIDGFMRQGDIEQAFRIKDEMVACGIEANL---IIWNTLLNGVCKAGKMEKALEIMQEMM 373
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + PD Y + + + +L++ M+++ L P ++
Sbjct: 374 EK-GVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK---------------LAPTVL 417
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y+ ++N +G + +++ +GLKP+A Y L+ A +EG
Sbjct: 418 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVY------------TTLMTAHAKEG 465
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
++ E+ + M ++G++ Y L C R ++A + ++ R +P T+
Sbjct: 466 RVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE-RRLRPNAHTY 524
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFSKAKELFE--- 490
I G ++ F M C PN+G A+++ + + ++A +F
Sbjct: 525 GAFIDGYSKAGEMEIADRYFNEMLS-CGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFIL 583
Query: 491 -----ETTRANSSGYTFLSGDGA--------------PLKPDEYTYSSMLEASATAHQWE 531
+ + S LS +G L P+ +TY+S++ S +
Sbjct: 584 SRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVD 643
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + M + G D + L+ +AG+ ++ FD + G P+ + + M+
Sbjct: 644 KASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMV 703
Query: 592 IQAIVQSNYEKAVALINAM 610
N A L+ M
Sbjct: 704 DGYCKSKNPTAAFQLLEEM 722
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 96/471 (20%), Positives = 188/471 (39%), Gaps = 64/471 (13%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
EK +++ +L++ + A+ ++ + M + L T ++ GL G+ +
Sbjct: 374 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 433
Query: 208 QAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
++L + GLK + VYT L+ K GR E+ I M E + PD+
Sbjct: 434 GTNAILREMVMNGLK-----PNAVVYTTLMTAHAKEGRVEESRMILERMREQ-GILPDVF 487
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y+S+ + G K +RM + + ++ + R+ L P+ Y A ++
Sbjct: 488 CYNSLII-----GFCKA-----KRMEEARTYLMEMLERR-----LRPNAHTYGAFIDGYS 532
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY------------------RRCL---- 363
+ + + F ++ G+ P+ Y +E + RR L
Sbjct: 533 KAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQ 592
Query: 364 -LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
VL+ GK++EA ++++G++ A Y L C G A ++E++
Sbjct: 593 TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM 652
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM 481
++ P +T+ LI G I+ ++F ++ PN T AM+ Y ++
Sbjct: 653 -CIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 711
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
+ A +L EE G P PD + Y+ +L ++E +++ M
Sbjct: 712 PTAAFQLLEEMLLR-----------GVP--PDAFIYNVILNFCCKEEKFEKALDLFQEML 758
Query: 542 LSGCQLDQTKHAWLLVEA-SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
G T L+E ++GK H + ++E IP+ + +T ++
Sbjct: 759 EKG--FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLI 807
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 136/329 (41%), Gaps = 44/329 (13%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+E +L+++N +LN + + + + +++ + G++P + TY L +E + C + + R
Sbjct: 342 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGH--CRGQNMAR 399
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
AF + M++R + T Y + LC G Q ++ ++ + K
Sbjct: 400 AF----------ELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREM-VMNGLK 448
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK-- 486
P + +T L+ + G +++ I + M++ P++ N+++ + + +A+
Sbjct: 449 PNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTY 508
Query: 487 --ELFEETTRANSSGY-TFLSGD-----------------GAPLKPDEYTYSSMLEASA- 525
E+ E R N+ Y F+ G + P+ Y++++E
Sbjct: 509 LMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCK 568
Query: 526 ---TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ F ++ L D ++ L+ SR GK H F L E G +P
Sbjct: 569 EGNVTEAFSVFRFILSRRVLQ----DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLP 624
Query: 583 HPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ + ++ + Q N +KA L+ M
Sbjct: 625 NAFTYNSLISGSCKQGNVDKASQLLEEMC 653
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 158/395 (40%), Gaps = 54/395 (13%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ L Y+ ++A L KA +A+ + N M+++ + PD Y+S+ G
Sbjct: 229 DRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYNSILHGYCSSGQP 287
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
KE + +++MR +EP++V Y++++N + + +F +
Sbjct: 288 KEAIGTLKKMRSDG---------------VEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
K GL+P ATY + L++ + +G + E A + M + G+ V+
Sbjct: 333 TKRGLEPDIATY------------RTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFN 380
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMK 459
L C + AMLV K++ +H + G +I + G +DD + F+ M
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMR--QHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438
Query: 460 DH-CEPNIGTVNAMLKVYSRNDMFSKAKEL-FEETTRANSSGYTFLSG-------DG--- 507
D PNI +++ D + KA+EL E R F + +G
Sbjct: 439 DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 498
Query: 508 -----------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+KPD TY+++++ A + + + M G + D + L+
Sbjct: 499 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 558
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
R + F ++ +G P+ + + +L
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 113/579 (19%), Positives = 222/579 (38%), Gaps = 60/579 (10%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R +A L+ L + T+ V R M + G + LLKGL D+
Sbjct: 120 KKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRS 179
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++A+ +L + + Y +L K G +A ++ ML D + PD+
Sbjct: 180 QEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEML-DRGILPDVVT 238
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y S+ L + + + ++++ M +KN + PD + YN++L+
Sbjct: 239 YSSIIAALCKAQAMDKAMEVLNTM-------VKNG--------VMPDCMTYNSILHGYCS 283
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRN 386
S Q K K++R G++P+ TY L+ + G+ EA +
Sbjct: 284 SGQPKEAIGTLKKMRSDGVEPNVVTY------------SSLMNYLCKNGRSTEARKIFDS 331
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDG 445
M +RG+ + Y L G + +++ + +R+ +P F LI +
Sbjct: 332 MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM--VRNGIQPDHHVFNILICAYAKQ 389
Query: 446 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+D + +F M+ H PN+ ++ V ++ A FE+
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG-------- 441
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
L P+ Y+S++ T +W+ E + M G L+ ++ + G+
Sbjct: 442 -----LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 624
E FD ++ G P + + ++ + ++A L+ +M +
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 556
Query: 625 LFESNEDRISR-DKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFG 683
L + R+SR D L + + + + IT + + + L R+ ++L S
Sbjct: 557 LI-NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS 615
Query: 684 SQAIDISP----LHGIHEAFDVKETENVPSSSASMMFEN 718
+++S LHG+ +N + A MF+N
Sbjct: 616 GTQLELSTYNIILHGL--------CKNNLTDEALRMFQN 646
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 99/491 (20%), Positives = 175/491 (35%), Gaps = 110/491 (22%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L + + K + + M ++G+M +L G G ++A+ L ++
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK---MR 298
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ Y+ L+ L K GR EA +IF+ M + L PDIA Y ++ G L
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQGYATKGAL 357
Query: 281 KELVKLIERMRQ---KPSKRIKNM-----------------HRKNWDPVLEPDLVVYNAV 320
E+ L++ M + +P + N+ K L P++V Y V
Sbjct: 358 VEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTV 417
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC---------LLKVLVRAF 371
++ S F+Q+ GL P+ Y + C +L++L R
Sbjct: 418 IDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477
Query: 372 W--------------EEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACCLCNNGRWQDA 415
+EG++ E+ M + GV Y L CCL G+ +A
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLA--GKMDEA 535
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 474
++ + S+ KP +T+ LI +DD +++F+ M PNI T N +L+
Sbjct: 536 TKLLASMVSV-GVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 594
Query: 475 -------------VY----------------------SRNDMFSKAKELFE--------- 490
+Y +N++ +A +F+
Sbjct: 595 GLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 654
Query: 491 -------------ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+ R + + F + L PD TYS M E E + ++
Sbjct: 655 ETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLF 714
Query: 538 KGMALSGCQLD 548
M +GC D
Sbjct: 715 LSMEENGCSAD 725
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 184/434 (42%), Gaps = 33/434 (7%)
Query: 165 LSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRD 224
L RE++ K ++ M++ G LL L G QA V + +K K
Sbjct: 197 LRSREVS-KGFEVYEEMHRKGYKLDIFAYNMLLDALAKAGMVDQAYQVFE---DMKQKYC 252
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLLKEL 283
+ + YT L+ + GK G+ ++ L F+ M+ C L ++ AY++V LG+ ++ ++
Sbjct: 253 VPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCAL--NLIAYNTVIEALGKNKMVDKV 310
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPV-LEPDLVVYNAVLNACVPSHQWKGVF-WVFKQLR 341
+ ++ +M + + + + D + E L N VL+ C + K ++ ++ K L
Sbjct: 311 IFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEVLDIC-DRYLNKSIYSYLVKSLC 369
Query: 342 KSGLKPSAATYGLAM----ESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
KSG A M ES R ++ GK EA+ + M ++G+
Sbjct: 370 KSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGKTLEAIDLLHMMPEKGIDTDIG 429
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIF 455
+Y + L G+ + + ++ S P T+ +I S G +D +F
Sbjct: 430 MYNMVFSAL---GKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDKASGLF 486
Query: 456 QHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 514
+ M+ C+P++ T N ++ +N +A LF+E GY PD
Sbjct: 487 EEMEASSCKPDVITYNTLINCLGKNGDLDEAHILFKEM---QEKGY----------DPDV 533
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 574
+TYS+++E +++ + ++ M GC + + LL R GK +++
Sbjct: 534 FTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCLERRGKTAEAHKHYET 593
Query: 575 LLEAGEIPHPLFFT 588
+ + G P + ++
Sbjct: 594 MKQQGLTPDSITYS 607
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 146/390 (37%), Gaps = 63/390 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y LL L KAG +A ++F M + + PD Y + G+ G + + +
Sbjct: 222 FAYNMLLDALAKAGMVDQAYQVFEDMKQKYCV-PDAYTYTILIRMSGKTGQTYKFLSFFD 280
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M + +L+ YN V+ A + V +V ++ +S +P+
Sbjct: 281 EMVSRGCAL---------------NLIAYNTVIEALGKNKMVDKVIFVLSKMIESDCQPN 325
Query: 349 AATYGLAME--------------------SYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
TY L ++ + + LV++ + G +EA M
Sbjct: 326 QFTYSLTLDILATEGQLHRLNEVLDICDRYLNKSIYSYLVKSLCKSGHASEAHNVFCRMW 385
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP-----LEITFTGLIISSM 443
G + + LCN+G+ +A+ L H P +I ++ S++
Sbjct: 386 NSHESGDRDAFISMLEVLCNSGKTLEAI-------DLLHMMPEKGIDTDIGMYNMVFSAL 438
Query: 444 DG-GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
+ ++F MK P++ T N M+ Y R + KA LFEE
Sbjct: 439 GKLKQVSFISTLFDKMKASGIAPDLFTYNIMISSYGRVGLVDKASGLFEEM--------- 489
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
+ + KPD TY++++ + ++K M G D ++ L+ +
Sbjct: 490 ----EASSCKPDVITYNTLINCLGKNGDLDEAHILFKEMQEKGYDPDVFTYSTLIECFGK 545
Query: 562 AGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ K + FD ++ G IP+ + + +L
Sbjct: 546 SNKVDMACSLFDEMIAEGCIPNIVTYNILL 575
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 174/424 (41%), Gaps = 69/424 (16%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E+R R A +D S+ ++ M G++ G L++G +G+
Sbjct: 523 ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 582
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A SV ++ + +D+++ Y+ L+ L + G+ HEA IF+ L++ L P+ Y
Sbjct: 583 EAFSVFRFILSRRVLQDVQT---YSVLIHGLSRNGKMHEAFGIFS-ELQEKGLLPNAFTY 638
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+S+ + G + + +L+E M K + PD+V YN +++ +
Sbjct: 639 NSLISGSCKQGNVDKASQLLEEMCIKG---------------INPDIVTYNILIDGLCKA 683
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-----------------------LL 364
+ + +F + GL P+ TY ++ Y + +
Sbjct: 684 GEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIY 743
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
V++ +E K +A+ + M ++G T S + L C +G+ Q+A ++E++
Sbjct: 744 NVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIE 802
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFS 483
+ P +T+T LI + G + + ++ M++ + P T ++L Y S
Sbjct: 803 -KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMS 861
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
+ LFEE ++PD+ TY M++A Y +G +
Sbjct: 862 EVSALFEEMVAKG-------------IEPDKMTYYVMIDA-----------YCREGNVME 897
Query: 544 GCQL 547
C+L
Sbjct: 898 ACKL 901
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/439 (19%), Positives = 170/439 (38%), Gaps = 57/439 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +G QA + D + + +L ++ LL + KAG+ +AL I M+
Sbjct: 326 LIDGFMRQGDIEQAFRIKDEMVACGIEANL---IIWNTLLNGVCKAGKMEKALEIMQEMM 382
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + PD Y + + + +L++ M+++ L P ++
Sbjct: 383 EK-GVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK---------------LAPTVL 426
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y+ ++N +G + +++ +GLKP+A Y L+ A +EG
Sbjct: 427 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVY------------TTLMTAHAKEG 474
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
++ E+ + M ++G++ Y L C R ++A + ++ R +P T+
Sbjct: 475 RVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE-RRLRPNAHTY 533
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFSKAKELFE--- 490
I G ++ F M C PN+G A+++ + + ++A +F
Sbjct: 534 GAFIDGYSKAGEMEIADRYFNEMLS-CGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFIL 592
Query: 491 -----ETTRANSSGYTFLSGDG--------------APLKPDEYTYSSMLEASATAHQWE 531
+ + S LS +G L P+ +TY+S++ S +
Sbjct: 593 SRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVD 652
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + M + G D + L+ +AG+ ++ FD + G P+ + + M+
Sbjct: 653 KASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMV 712
Query: 592 IQAIVQSNYEKAVALINAM 610
N A L+ M
Sbjct: 713 DGYCKSKNPTAAFQLLEEM 731
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 136/329 (41%), Gaps = 44/329 (13%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+E +L+++N +LN + + + + +++ + G++P + TY L +E + C + + R
Sbjct: 351 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGH--CRGQNMAR 408
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
AF + M++R + T Y + LC G Q ++ ++ + K
Sbjct: 409 AF----------ELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREM-VMNGLK 457
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK-- 486
P + +T L+ + G +++ I + M++ P++ N+++ + + +A+
Sbjct: 458 PNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTY 517
Query: 487 --ELFEETTRANSSGY-TFLSGD-----------------GAPLKPDEYTYSSMLEASA- 525
E+ E R N+ Y F+ G + P+ Y++++E
Sbjct: 518 LMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCK 577
Query: 526 ---TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ F ++ L D ++ L+ SR GK H F L E G +P
Sbjct: 578 EGNVTEAFSVFRFILSRRVLQ----DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLP 633
Query: 583 HPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ + ++ + Q N +KA L+ M
Sbjct: 634 NAFTYNSLISGSCKQGNVDKASQLLEEMC 662
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 57/334 (17%), Positives = 122/334 (36%), Gaps = 42/334 (12%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
+ PD+ Y ++ +VG +K+ +++ M +K P+LV YN
Sbjct: 211 VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCS---------------PNLVTYNV 255
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
++ + + + + GL P TY +L+ F E + E
Sbjct: 256 IIGGLCRARLLDEAIELKRSMVDKGLVPDLYTY------------DILINGFCMEKRSRE 303
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
A + M G+ Y L G + A + +++ + L I + L+
Sbjct: 304 AKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANL-IIWNTLL 362
Query: 440 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
G ++ + I Q M + EP+ T + +++ + R ++A EL +E +
Sbjct: 363 NGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK-- 420
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
L P TYS ++ + + + M ++G + + + L+
Sbjct: 421 -----------LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTA 469
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 592
++ G+ + + E G +P + ++I
Sbjct: 470 HAKEGRVEESRMILERMREQGILPDVFCYNSLII 503
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 165/393 (41%), Gaps = 56/393 (14%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
R ++SR TKL+ L + G+P EA IF ++E + P + +Y ++ L
Sbjct: 11 RTVRSR---TKLMNFLVEKGKPQEAESIFYSLIEGGH-KPSLISYTTLLAALTMQKRFDS 66
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
+ +I ++ + + PD + +NAV+NA S + F ++++
Sbjct: 67 IYSIISQVEENG---------------MNPDSIFFNAVINAFSESGNMESAMETFWKMQE 111
Query: 343 SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG-VVGTASVYYE 401
+G+KP+ +TY L++ + GK E+V + M Q G V Y
Sbjct: 112 NGMKPTTSTY------------NTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYNV 159
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 461
L CN R +A VV K+ + +P +T+ + + G +D + M+++
Sbjct: 160 LVRAWCNKKRITEAWNVVYKMIA-SGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNN 218
Query: 462 -CEPNIGTVNAMLKVYSRNDMFSKA-------KEL--FEETTRANS--SGYT-FLSGDGA 508
+PN T ++ Y + +A KEL NS G+ + DG
Sbjct: 219 GVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGV 278
Query: 509 ----------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
+KPD T+S+++ A +TA E ++ M +G + D ++ L
Sbjct: 279 DEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKG 338
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
RA + E +++++G P+ + FT ++
Sbjct: 339 YVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVI 371
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 139/348 (39%), Gaps = 65/348 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G+ +G +A+ + D + G + D+ + Y L+ L K G A+R+ M+
Sbjct: 137 LIRGICVEGKIGEALHLFDKMIGEGFRPDVVT---YGTLINGLCKVGNTSAAIRLLGSMV 193
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N P++ AY+++ +L + + E L M K + PD+
Sbjct: 194 QK-NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG---------------ISPDIF 237
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN++++A +WK V + ++ S + P ++ +V A +EG
Sbjct: 238 TYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSF------------NTVVDALCKEG 285
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
K+ EA V M QRGV Y L C +A+ V + + + P I++
Sbjct: 286 KVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVC-KGCMPNVISY 344
Query: 436 TGLI-----ISSMDGG--------------HIDDCISIFQHMK-DHCEPNIGTVNAMLKV 475
LI I +D ++D+ + +F M C PN+ + N ++
Sbjct: 345 NTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLING 404
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
Y + KA LF E R L PD TYS+++
Sbjct: 405 YCKIQRIDKAMYLFGEMCRQE-------------LIPDTVTYSTLIHG 439
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/301 (17%), Positives = 119/301 (39%), Gaps = 27/301 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P V +N +L + + + Q+ G+ P+ T L +L+ +F
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYT------------LHILINSF 106
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
++ A + + + + G + + L +C G+ +A+ + +K+ +P
Sbjct: 107 CHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIG-EGFRPD 165
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+T+ LI G+ I + M + +C+PN+ N ++ ++ ++A LF
Sbjct: 166 VVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFS 225
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E S PD +TY+S++ A +W++ + M S D
Sbjct: 226 EMVTKGIS-------------PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVV 272
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
++ + GK D +++ G P+ + +T ++ + S ++AV + + M
Sbjct: 273 SFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTM 332
Query: 611 A 611
Sbjct: 333 V 333
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 137/337 (40%), Gaps = 47/337 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y +++ I GKAG P +A ++ M P+I + ++ + GL +E + ++
Sbjct: 211 TYNRMIVIYGKAGEPSKAEMLYRSM-RRAMCPPNICTFTALMNAFARQGLYREAERYFDK 269
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+++ K PD YNA++ A G +F+ ++++G P
Sbjct: 270 LQEFDYK---------------PDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDT 314
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
++ +L+ A+ G +A ++M+ G L
Sbjct: 315 VSH------------NILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARA 362
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM----KDHCEPN 465
GR ++A +V ++ +KP + + LI + G +D ++ M +P+
Sbjct: 363 GRVEEAEELVSAMER-DGTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPD 421
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
IGT N +++VY++ KA+ELF+ R L PD T+++++ A
Sbjct: 422 IGTYNTLIQVYAQAGFIPKAEELFQGLARLK-------------LVPDATTWTALMGGYA 468
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
+ + K M SGC+ D A +L A R+
Sbjct: 469 KKKLYRKCTSILKKMLESGCRADAVT-ARVLFSACRS 504
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 127/337 (37%), Gaps = 60/337 (17%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLV 368
PDL YN +++A S + F +++++ P+ T+G+ + YR
Sbjct: 99 AFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLA------ 152
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
G +A M++RG Y CN + V+E K R +
Sbjct: 153 ------GSFEKAEELFVQMQKRG--------YSPGPLACNT-----FLHVLEDAKEYRRA 193
Query: 429 K------------PLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKV 475
+ P T+ +I+ G +++ M+ C PNI T A++
Sbjct: 194 EALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNA 253
Query: 476 YSRNDMFSKAKELFEETT----RANSSGYTFL----SGDGAPLK--------------PD 513
++R ++ +A+ F++ + + Y L S G+P PD
Sbjct: 254 FARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPD 313
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
+++ ++ A A +E E ++K M +G + + LL +RAG+ E
Sbjct: 314 TVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVS 373
Query: 574 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
++ G P L + ++ V +E AL+ M
Sbjct: 374 AMERDGTKPDTLIYNALINAYGVSGRHEDMEALLAKM 410
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 166/429 (38%), Gaps = 70/429 (16%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
++L+ LG GS+ +L + GL + D R V + K E L I +M
Sbjct: 92 EILRKLGKVGSFNSMKDILQEMKGLDCQID---RGVLLIFIDSYAKFELYEEILCIVEVM 148
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ L D Y+ LL LV K ++N+H ++PD+
Sbjct: 149 EVEFGLALDTLLYNF---------LLNVLVD------GNKLKLVENVHSTMVSKGIKPDV 193
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+N ++ A +HQ + V +++ GL P T+ L++ F EE
Sbjct: 194 STFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTF------------TTLMQGFIEE 241
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS-LRHS----- 428
G ++ A M G T L C GR ++A+ ++++ + +H+
Sbjct: 242 GNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIEL 301
Query: 429 ---------KPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSR 478
+P E T+ LI S G + + + + + M+ C N+ T N ++ + +
Sbjct: 302 YNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCK 361
Query: 479 NDMFSKAKELFEET----TRANSSGYTFLSGDGA-------------------PLKPDEY 515
N +A+E+F++ NS Y L DG LKPD++
Sbjct: 362 NKKIEEAEEIFDQMEIQGLSRNSVTYNTLI-DGLCKSRRVQEAAQLMDQMIMEGLKPDKF 420
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
TY+SML + + + M +GC+ D + L+ +AG+ + S+
Sbjct: 421 TYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSI 480
Query: 576 LEAGEIPHP 584
G + P
Sbjct: 481 QLKGMVLTP 489
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 36/216 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ GL ++A ++D + GLK +F Y +L + G +A I
Sbjct: 390 LIDGLCKSRRVQEAAQLMDQMIMEGLK-----PDKFTYNSMLTYFCREGDIQKAADIVQT 444
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M + PDI Y ++ L + G ++ +L+ S ++K M VL P
Sbjct: 445 MTSN-GCEPDIVTYGTLIGGLCKAGRVEVASRLLR------SIQLKGM-------VLTPH 490
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
YN V+ A + K +F+++ + G P A TY K++ R
Sbjct: 491 --AYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTY------------KIVFRGLSN 536
Query: 374 E-GKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
G I EAV V M ++G + S +Y LA LC+
Sbjct: 537 SGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCS 572
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 155/391 (39%), Gaps = 51/391 (13%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
R +A+ + + M+E PD + ++ L E V L++RM Q+
Sbjct: 95 RISDAVALVDQMVE-MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC------- 146
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES---Y 359
+P+LV Y V+N F + ++ + ++ + ++S Y
Sbjct: 147 --------QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 198
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLV 418
R +++A+ + ME +G+ Y L CLC+ GRW DA L+
Sbjct: 199 RH---------------VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS 477
+ I+ + P +TF LI + + G + + M K +P+I T N+++ +
Sbjct: 244 SDMIE--KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+D KAK++FE + PD TY+++++ + + E ++
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCF-------------PDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 538 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 597
+ M+ G D + L+ G C + F ++ G P + ++ +L
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Query: 598 SNYEKAVALINAMAYAPFHITERQWTELFES 628
EKA+ + + M + + +T + E
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 439
Score = 42.7 bits (99), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 85/207 (41%), Gaps = 34/207 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L G A ++F M+ D + PDI Y + L G L++ +++ + M
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 291 RQKPSK--------RIKNMHR-----KNWDPV-------LEPDLVVYNAVLNACVPSHQW 330
++ K I+ M + WD ++P++V YN +++
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
+ + + K++++ G P + TY L+RA +G + +R M
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTY------------NTLIRAHLRDGDKAASAELIREMRSC 529
Query: 391 GVVGTASVYYELACCLCNNGRWQDAML 417
VG AS +A L ++GR + L
Sbjct: 530 RFVGDASTIGLVANML-HDGRLDKSFL 555
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 148/354 (41%), Gaps = 38/354 (10%)
Query: 155 AEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
A++ ++VD L + + W + M + G + + M K+++ L W +A+
Sbjct: 1486 ADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFH 1545
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
+ +D K+ V LL L K A +F + + PD +++++
Sbjct: 1546 KMDRFGVVKDTKAMNV---LLDTLCKERSVKRARGVFQELRG--TIPPDENSFNTLVHGW 1600
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ +LKE + +E M+Q P +V Y +++ A ++ V+
Sbjct: 1601 CKARMLKEALDTMEEMKQHG---------------FSPSVVTYTSLVEAYCMEKDFQTVY 1645
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
+ ++RK P+ TY +L+ A + G+ EA+ +++ GV
Sbjct: 1646 ALLDEMRKRRCPPNVVTY------------TILMHALGKAGRTREALDTFDKLKEDGVAP 1693
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
AS Y L L GR +DA VVE++++ + P TF LI ++ D ++ + +
Sbjct: 1694 DASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIA-PNVTTFNTLISAACDHSQAENALKL 1752
Query: 455 FQHMKDH-CEPNIGTVNAMLKVYSRND----MFSKAKELFEETTRANSSGYTFL 503
M++ C P+I T +LK+ + + +F + + S YT L
Sbjct: 1753 LVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLL 1806
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 32/213 (15%)
Query: 216 VYGLKD----KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
VY L D +R + YT L+ LGKAGR EAL F+ + ED + PD + Y+S+
Sbjct: 1644 VYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKED-GVAPDASFYNSLI 1702
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
LG+ G L++ ++E MR + P++ +N +++A Q +
Sbjct: 1703 YILGRAGRLEDAYSVVEEMRTTG---------------IAPNVTTFNTLISAACDHSQAE 1747
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
+ ++ + P TY LLK+ + W + + V +M ++
Sbjct: 1748 NALKLLVKMEEQSCNPDIKTYTP--------LLKLCCKRQW----VKILLFLVCHMFRKD 1795
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
+ S Y L LC NG+ + L +E++ S
Sbjct: 1796 ISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVS 1828
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 184/446 (41%), Gaps = 49/446 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL + + +AMS L + ++ + + Y LL+ K + RI N+M+
Sbjct: 48 MISGLMEASYFDEAMSFL---HRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMM 104
Query: 256 -EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKNW---DP 308
E CN P+ + ++S+ + KL+ RM P + N+ + +
Sbjct: 105 TEGCN--PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 162
Query: 309 VLEPDLV-----VY------NAVLNA--------CVPS-HQWKGVFWVFKQLRKSGLKPS 348
+ PDL+ +Y N VLN C+ ++ F + K++ + G P
Sbjct: 163 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPD 222
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
+TY ++ K+ +A + M+ GV Y L C
Sbjct: 223 TSTY------------SKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 270
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 467
G + A + E+++S+ S P +T+T LI + + + IF M D C PN
Sbjct: 271 AGLIEQAQWLFEEMRSVGCS-PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 329
Query: 468 TVNAMLKVYSRNDMFSKAKELFEE---TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
T A++ + SKA E++ + T+ + S + F D L P+ TY ++++
Sbjct: 330 TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGL 389
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
AH+ ++ + M SGC+ + + L+ +AGK + F + + G +P
Sbjct: 390 CKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSV 449
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAM 610
+T ++ + + A+ +++ M
Sbjct: 450 HTYTSLIDRMFKDGRLDLAMKVLSQM 475
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 20/185 (10%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
EP+ +VY+A+++ + + VF Q+ K G PS TY L+
Sbjct: 411 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTY------------TSLIDR 458
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK- 429
+++G+++ A+ + M + Y + LC G + A+ K+ SL K
Sbjct: 459 MFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL----KLLSLMEEKG 514
Query: 430 --PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
P +T+T LI G ID + +F M + C PN T ++ + KA+
Sbjct: 515 CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 574
Query: 487 ELFEE 491
L E
Sbjct: 575 LLLGE 579
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 37/213 (17%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
L S YT L+ + K GR A+++ + ML+D + P++ Y ++ L ++G ++ +
Sbjct: 446 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD-SCTPNVVTYTAMIDGLCRIGESEKAL 504
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
KL+ M +K P++V Y A+++ + + +F Q+ + G
Sbjct: 505 KLLSLMEEKGC---------------SPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 549
Query: 345 LKPSAATYGLAMESY--------RRCLLKVLVRAFWE----------EGKINEAVAA--- 383
P+ TY + + R LL + + +W +G +A+
Sbjct: 550 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGI 609
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
+ ME G V A VY L C GR + AM
Sbjct: 610 LEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAM 642
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 74/411 (18%), Positives = 142/411 (34%), Gaps = 66/411 (16%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L G+ +A ++ M+ PD + Y V L +++ L + M+
Sbjct: 198 LCGVGKFDKAFQLIKEMMRK-GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG--- 253
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+ PD+ Y ++++ + + W+F+++R G P+ TY
Sbjct: 254 ------------VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY----- 296
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
L+ A+ + ++ +A M G Y L LC G A
Sbjct: 297 -------TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 349
Query: 418 VVEKIKSL--------------RHSKPLEITFTGLIISSMDGGH-IDDCISIFQHM-KDH 461
V K+ RH+ + G ++ + H +D + M
Sbjct: 350 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 409
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN--SSGYTFLS------GDGA----- 508
CEPN +A++ + + A+E+F + T+ S +T+ S DG
Sbjct: 410 CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 469
Query: 509 ---------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 559
P+ TY++M++ + E + M GC + + L+
Sbjct: 470 KVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 529
Query: 560 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+AGK L F + G P+ + + ++ +KA L+ M
Sbjct: 530 GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 580
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 158/395 (40%), Gaps = 54/395 (13%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ L Y+ ++A L KA +A+ + N M+++ + PD Y+S+ G
Sbjct: 229 DRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYNSILHGYCSSGQP 287
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
KE + +++MR +EP++V Y++++N + + +F +
Sbjct: 288 KEAIGTLKKMRSDG---------------VEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
K GL+P ATY + L++ + +G + E A + M + G+ V+
Sbjct: 333 TKRGLEPDIATY------------RTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFN 380
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMK 459
L C + AMLV K++ +H + G +I + G +DD + F+ M
Sbjct: 381 ILICAYAKQEKVDQAMLVFSKMR--QHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438
Query: 460 DH-CEPNIGTVNAMLKVYSRNDMFSKAKEL-FEETTRANSSGYTFLSG-------DG--- 507
D PNI +++ D + KA+EL E R F + +G
Sbjct: 439 DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 498
Query: 508 -----------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+KPD TY+++++ A + + + M G + D + L+
Sbjct: 499 ESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 558
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
R + F ++ +G P+ + + +L
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 113/579 (19%), Positives = 222/579 (38%), Gaps = 60/579 (10%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R +A L+ L + T+ V R M + G + LLKGL D+
Sbjct: 120 KKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRS 179
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++A+ +L + + Y +L K G +A ++ ML D + PD+
Sbjct: 180 QEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEML-DRGILPDVVT 238
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y S+ L + + + ++++ M +KN + PD + YN++L+
Sbjct: 239 YSSIIAALCKAQAMDKAMEVLNTM-------VKNG--------VMPDCMTYNSILHGYCS 283
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRN 386
S Q K K++R G++P+ TY L+ + G+ EA +
Sbjct: 284 SGQPKEAIGTLKKMRSDGVEPNVVTY------------SSLMNYLCKNGRSTEARKIFDS 331
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDG 445
M +RG+ + Y L G + +++ + +R+ +P F LI +
Sbjct: 332 MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM--VRNGIQPDHHVFNILICAYAKQ 389
Query: 446 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+D + +F M+ H PN+ ++ V ++ A FE+
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG-------- 441
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
L P+ Y+S++ T +W+ E + M G L+ ++ + G+
Sbjct: 442 -----LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 624
E FD ++ G P + + ++ + ++A L+ +M +
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 556
Query: 625 LFESNEDRISR-DKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFG 683
L + R+SR D L + + + + IT + + + L R+ ++L S
Sbjct: 557 LI-NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS 615
Query: 684 SQAIDISP----LHGIHEAFDVKETENVPSSSASMMFEN 718
+++S LHG+ +N + A MF+N
Sbjct: 616 GTQLELSTYNIILHGL--------CKNNLTDEALRMFQN 646
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 99/491 (20%), Positives = 175/491 (35%), Gaps = 110/491 (22%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L + + K + + M ++G+M +L G G ++A+ L ++
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK---MR 298
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ Y+ L+ L K GR EA +IF+ M + L PDIA Y ++ G L
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQGYATKGAL 357
Query: 281 KELVKLIERMRQ---KPSKRIKNM-----------------HRKNWDPVLEPDLVVYNAV 320
E+ L++ M + +P + N+ K L P++V Y V
Sbjct: 358 VEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTV 417
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC---------LLKVLVRAF 371
++ S F+Q+ GL P+ Y + C +L++L R
Sbjct: 418 IDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477
Query: 372 W--------------EEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACCLCNNGRWQDA 415
+EG++ E+ M + GV Y L CCL G+ +A
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLA--GKMDEA 535
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 474
++ + S+ KP +T+ LI +DD +++F+ M PNI T N +L+
Sbjct: 536 TKLLASMVSV-GVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 594
Query: 475 -------------VY----------------------SRNDMFSKAKELFE--------- 490
+Y +N++ +A +F+
Sbjct: 595 GLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 654
Query: 491 -------------ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+ R + + F + L PD TYS M E E + ++
Sbjct: 655 ETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLF 714
Query: 538 KGMALSGCQLD 548
M +GC D
Sbjct: 715 LSMEENGCSAD 725
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 93/446 (20%), Positives = 185/446 (41%), Gaps = 49/446 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL + + +AMS +++ ++ + + Y LL+ K + RI N+M+
Sbjct: 113 MISGLMEASYFDEAMS---FLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMM 169
Query: 256 -EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKNW---DP 308
E CN P+ + ++S+ + KL+ RM P + N+ + +
Sbjct: 170 TEGCN--PNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 227
Query: 309 VLEPDLV-----VYNAVLNA-CVPSH--------------QWKGVFWVFKQLRKSGLKPS 348
+ PDL+ +Y +L A CV + ++ F + K++ + G P
Sbjct: 228 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPD 287
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
+TY ++ K+ +A + M+ GV Y L C
Sbjct: 288 TSTY------------SKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 335
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 467
G + A + E+++S+ S P +T+T LI + + + IF M D C PN
Sbjct: 336 AGLIEQAQWLFEEMRSVGCS-PTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDV 394
Query: 468 TVNAMLKVYSRNDMFSKAKELFEE---TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
T A++ + SKA E++ + T+ + S + F D L P+ TY ++++
Sbjct: 395 TYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGL 454
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
AH+ ++ + M SGC+ + + L+ +AGK + F + + G +P
Sbjct: 455 CKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSV 514
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAM 610
+T ++ + + A+ +++ M
Sbjct: 515 HTYTSLIDRMFKDGRLDLAMKVLSQM 540
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 20/185 (10%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
EP+ +VY+A+++ + + VF Q+ K G PS TY L+
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTY------------TSLIDR 523
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK- 429
+++G+++ A+ + M + Y + LC G + A+ K+ SL K
Sbjct: 524 MFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL----KLLSLMEEKG 579
Query: 430 --PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
P +T+T LI G ID + +F M + C PN T ++ + KA+
Sbjct: 580 CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 639
Query: 487 ELFEE 491
L E
Sbjct: 640 LLLGE 644
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 37/213 (17%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
L S YT L+ + K GR A+++ + ML+D + P++ Y ++ L ++G ++ +
Sbjct: 511 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD-SCTPNVVTYTAMIDGLCRIGESEKAL 569
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
KL+ M +K P++V Y A+++ + + +F Q+ + G
Sbjct: 570 KLLSLMEEKGC---------------SPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614
Query: 345 LKPSAATYGLAMESY--------RRCLLKVLVRAFWE----------EGKINEAVAA--- 383
P+ TY + + R LL + + +W +G +A+
Sbjct: 615 CSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGI 674
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
+ ME G V A VY L C GR + AM
Sbjct: 675 LEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAM 707
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 74/411 (18%), Positives = 142/411 (34%), Gaps = 66/411 (16%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L G+ +A ++ M+ PD + Y V L +++ L + M+
Sbjct: 263 LCGVGKFDKAFQLIKEMMRK-GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG--- 318
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+ PD+ Y ++++ + + W+F+++R G P+ TY
Sbjct: 319 ------------VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY----- 361
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
L+ A+ + ++ +A M G Y L LC G A
Sbjct: 362 -------TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 414
Query: 418 VVEKIKSL--------------RHSKPLEITFTGLIISSMDGGH-IDDCISIFQHM-KDH 461
V K+ RH+ + G ++ + H +D + M
Sbjct: 415 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 474
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN--SSGYTFLS------GDGA----- 508
CEPN +A++ + + A+E+F + T+ S +T+ S DG
Sbjct: 475 CEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 534
Query: 509 ---------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 559
P+ TY++M++ + E + M GC + + L+
Sbjct: 535 KVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 594
Query: 560 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+AGK L F + G P+ + + ++ +KA L+ M
Sbjct: 595 GKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEM 645
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 155/373 (41%), Gaps = 46/373 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV--KLI 287
V+ ++ + ++GR +A ++ + M D ++ PD+ +++++ + G L V +L+
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDAM-RDQDIEPDLVSFNTLINARAKSGCLAAGVALELL 281
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+RQ L PD + YN +++AC VF+++ S +P
Sbjct: 282 HEVRQAG---------------LRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRP 326
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
TY + + RC GK EA + + ++G A Y L
Sbjct: 327 DLWTYNAMVSVHGRC------------GKAQEAELMFKELVEKGFQPDAVTYNSLLYAFA 374
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI 466
G + V E++ K IT+ +I G +D + ++ M+ C P+
Sbjct: 375 KEGDVERVERVCEELVKAGFRKD-GITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDA 433
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T ++ + D S+A ++ EE A LKP T+S+++ A A
Sbjct: 434 VTYTVLVDSLGKMDRISEAGKVLEEMADAG-------------LKPTLVTFSALICAYAK 480
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
+ + + E + M SG + D+ + +L +R+ + L + ++++ G P
Sbjct: 481 SGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGL 540
Query: 587 FTEMLIQAIVQSN 599
+ ++L+ A+ + N
Sbjct: 541 Y-QVLLAALAKGN 552
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 135/319 (42%), Gaps = 29/319 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P + N ++ A + + ++ V ++L+ +K S +T L +E AF
Sbjct: 815 PTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLE------------AF 862
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ G + E + M+ G + +Y + LC+N R++D L+V +++ KP
Sbjct: 863 AKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGF-KPD 921
Query: 432 EITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ L++ G+ D I ++ ++ EP+ T N ++ +YSRN F
Sbjct: 922 LVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRN---------FR 972
Query: 491 ETTRANSSGYTFLSGDGA-PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
G+T L G L P +Y +L AS A WE + +++ M G +L++
Sbjct: 973 P-----EEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNR 1027
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
+ + ++ A EH ++ E G P ++ + ++A ++N+
Sbjct: 1028 SIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNS 1087
Query: 610 MAYAPFHITERQWTELFES 628
+ + I+ ++ + ++
Sbjct: 1088 LKSSNLEISTLPYSTVLDA 1106
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 110/265 (41%), Gaps = 19/265 (7%)
Query: 415 AMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 471
A + +E + +R + +P IT+ LI + G ++DD +++F+ M C P++ T NA
Sbjct: 274 AGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNA 333
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
M+ V+ R +A+ +F+E +PD TY+S+L A A E
Sbjct: 334 MVSVHGRCGKAQEAELMFKELVEKG-------------FQPDAVTYNSLLYAFAKEGDVE 380
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
E V + + +G + D + ++ + G+ L +D + G P + +T ++
Sbjct: 381 RVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLV 440
Query: 592 IQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAA 651
+A ++ MA A T ++ L + +D E+ + +
Sbjct: 441 DSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVK 500
Query: 652 SSEITVSNLSRALHALCRSEKERDL 676
+ + L RS++ R L
Sbjct: 501 PDRLAYLVM---LDVFARSDETRKL 522
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 127/314 (40%), Gaps = 32/314 (10%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWK-GV-FWVFKQLRKSGLKPSAATYGLAMESYRRCLL 364
D +EPDLV +N ++NA S GV + ++R++GL+P A TY
Sbjct: 249 DQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITY------------ 296
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
L+ A + +++AVA M Y + G+ Q+A L+ +++
Sbjct: 297 NTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVE 356
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFS 483
+ +P +T+ L+ + G ++ + + + K + T N M+ +Y +
Sbjct: 357 -KGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLD 415
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
A L++E + PD TY+ ++++ + V + MA +
Sbjct: 416 LALGLYDEMRAIGCT-------------PDAVTYTVLVDSLGKMDRISEAGKVLEEMADA 462
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
G + + L+ +++G+ E FD ++E+G P L + ML K
Sbjct: 463 GLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKL 522
Query: 604 VALINAM---AYAP 614
+ L AM Y P
Sbjct: 523 MVLYRAMIKDGYKP 536
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 74/185 (40%), Gaps = 16/185 (8%)
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK--AKELFE 490
F ++ G DD + M+D EP++ + N ++ +++ + A EL
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLH 282
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E +A L+PD TY++++ A + + V++ M S C+ D
Sbjct: 283 EVRQAG-------------LRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLW 329
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ ++ R GK E F L+E G P + + +L + + E+ + +
Sbjct: 330 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 389
Query: 611 AYAPF 615
A F
Sbjct: 390 VKAGF 394
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 98/471 (20%), Positives = 196/471 (41%), Gaps = 58/471 (12%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
+K++ E L+D L+ + + GL+ T L+K G+ G
Sbjct: 137 QKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVE 196
Query: 208 QAMSVLDWVYG-LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+ + WV+ +K+ S F Y L+ L + A R+F +M E+ + PD+
Sbjct: 197 EVL----WVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVM-ENGKIGPDVVT 251
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y+++ +VG +K +++K M +N + PD + Y ++ AC
Sbjct: 252 YNTMIKGYCEVG-----------KTRKAFEKLKAMELRN----VAPDKITYMTLIQACYA 296
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRN 386
+ ++ ++ + GL+ Y L ++ ++GK E N
Sbjct: 297 EGDFDSCLGLYHEMDEKGLEIPPHVYSL------------VIGGLCKDGKRVEGYTVFEN 344
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DG 445
M +G ++Y L G +AML+ +++K +P E+T+ G+I++S+
Sbjct: 345 MISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKK-EGLEPDEVTY-GVIVNSLCKS 402
Query: 446 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF--L 503
G +D+ + ++M + C VNAM +S + ++ R + + F +
Sbjct: 403 GRLDEAL---EYM-EFCSGKGVAVNAMF--------YSSLIDGLGKSGRVDEAERIFYEM 450
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
G P PD Y Y+++++A A + + + K M + GC DQT + + ++ +
Sbjct: 451 VKKGCP--PDSYCYNALIDALAKCGKIDEALALSKRMEVDGC--DQTVYTYTIL-ITGLF 505
Query: 564 KCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ H E A D +++ G P F + + +A +++ MA
Sbjct: 506 REHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMA 556
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 137/327 (41%), Gaps = 41/327 (12%)
Query: 172 AKNWKFVRI----MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
A W+ RI M G+ + ++L G D+G W++A +VL ++ + D
Sbjct: 352 AGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPD--- 408
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y ++ GK A+ +FN M + + PD+ ++++ + G ++L
Sbjct: 409 RHFYNVMIDTFGKYNCLGHAMDVFNRMRGE-GIEPDVVTWNTLIDAHCKGGRHDCAMELF 467
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ MR+ P YN ++N +W GV + ++++ GL P
Sbjct: 468 KEMRESNCP---------------PGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVP 512
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ TY LV + G+ EA+ + M+ G+ + ++Y+ L
Sbjct: 513 NIITY------------TTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYA 560
Query: 408 NNGRWQDAMLVVEKIKS--LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 464
G A+ VV+ +++ L S + LI + + + + S+ Q MK++ P
Sbjct: 561 QRGLADHALNVVKAMRADGLEAST---VVLNSLINAFGEDRRVVEAFSVLQFMKENDFRP 617
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEE 491
++ T ++K R + F K ++EE
Sbjct: 618 DVITYTTLMKALIRVEQFDKVPVIYEE 644
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 156/378 (41%), Gaps = 50/378 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAIL 238
M++ G+ E L+ G W A +L + G+K S +V++++LA
Sbjct: 330 MSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVK-----PSSYVFSRILAGF 384
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
G +A + M + PD Y+ + T G+ L + + RMR +
Sbjct: 385 RDRGDWQKAFAVLREM-HASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEG---- 439
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
+EPD+V +N +++A + +FK++R+S P TY
Sbjct: 440 -----------IEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTY------ 482
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
+++ E+ + + M+++G+V Y L +GR+++A+
Sbjct: 483 ------NIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDC 536
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYS 477
+E +K+ KP + L+ + G D +++ + M+ D E + +N+++ +
Sbjct: 537 IEAMKA-DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFG 595
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+ +A + + F+ + +PD TY+++++A Q++ +Y
Sbjct: 596 EDRRVVEAFSVLQ-----------FMKEND--FRPDVITYTTLMKALIRVEQFDKVPVIY 642
Query: 538 KGMALSGCQLDQTKHAWL 555
+ M SGC D+ A L
Sbjct: 643 EEMITSGCAPDRKARAML 660
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/407 (20%), Positives = 155/407 (38%), Gaps = 53/407 (13%)
Query: 211 SVLDWVYG-LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS 269
++L+ + G L+D R +++ L++ +A P AL + + L P A +
Sbjct: 215 AILERLLGDLRDSRLEPDAPLFSDLISAFARAALPDAALELLA-SAQAIGLTPRSNAVTA 273
Query: 270 VAVTLGQVGLLKE----LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
+ LG G + E ++ KP R YNA+L V
Sbjct: 274 LISALGIAGRVPEAEALFLEFFLAGEIKPRTR------------------AYNALLKGYV 315
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
K V ++ + G+ P ATY L +++Y R WE +I ++
Sbjct: 316 KIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRA-------GRWESARI-----LLK 363
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
ME GV ++ V+ + + G WQ A V+ ++ + +P + +I +
Sbjct: 364 EMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHA-SGVQPDRHFYNVMIDTFGKY 422
Query: 446 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+ + +F M+ + EP++ T N ++ + + A ELF+E +N
Sbjct: 423 NCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNC------- 475
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
P TY+ M+ +W E + M G + + L+ R+G+
Sbjct: 476 ------PPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGR 529
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAM 610
+++ G P P + L+ A Q + A+ ++ AM
Sbjct: 530 YKEAIDCIEAMKADGLKPSPTMY-HALVNAYAQRGLADHALNVVKAM 575
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 71/390 (18%), Positives = 153/390 (39%), Gaps = 54/390 (13%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI-KNMHRKN 305
ALR+ L+ E N PD+A+Y + +L R P I + +
Sbjct: 179 ALRLLALIREH-NFLPDLASYSHLLASLLNT-------------RDPPDAAILERLLGDL 224
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA-------ATYGLA--- 355
D LEPD +++ +++A + + + GL P + + G+A
Sbjct: 225 RDSRLEPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGIAGRV 284
Query: 356 -------MESY-------RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
+E + R L++ + + G + A + M + GV + Y
Sbjct: 285 PEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSL 344
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KD 460
L GRW+ A ++++++++ KP F+ ++ D G ++ + M
Sbjct: 345 LVDAYTRAGRWESARILLKEMEA-DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHAS 403
Query: 461 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 520
+P+ N M+ + + + A ++F + G+G ++PD T++++
Sbjct: 404 GVQPDRHFYNVMIDTFGKYNCLGHAMDVFNR-----------MRGEG--IEPDVVTWNTL 450
Query: 521 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 580
++A + + ++K M S C T + ++ + +E + E G
Sbjct: 451 IDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGL 510
Query: 581 IPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+P+ + +T ++ Y++A+ I AM
Sbjct: 511 VPNIITYTTLVDVYGRSGRYKEAIDCIEAM 540
>gi|34393621|dbj|BAC83297.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 657
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 168/404 (41%), Gaps = 75/404 (18%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
SR +Y LL L AG A+ +F+ M + + PD+ +Y+ + + G + +
Sbjct: 220 SRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMAR 279
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV----FKQLRK 342
+ M+++ L PD V Y ++ H +G F V F+++ +
Sbjct: 280 LSEMQEQAK--------------LTPDKVTYLTLMQC----HYSEGTFPVCIGLFQEMEE 321
Query: 343 SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
G+ + + ++ A ++GK E +A M +RG A++Y L
Sbjct: 322 RGMGNDIPQHAYVL----------VIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTAL 371
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-- 460
+ GR ++AM + E++K +GL + S+ G I +C+ F + +
Sbjct: 372 IDSMGKFGREKEAMALFERMKD-----------SGLKLDSVTYGVIVNCLCRFGKLDEAV 420
Query: 461 ----HCEPNIGTVNAMLKV-----YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 511
C+ VNA+ + + M ++KELFEE + G+
Sbjct: 421 ACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMI---AKGFV---------- 467
Query: 512 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW-LLVEASRAGKCHLLEH 570
PD Y Y+ +++ A + + + +YK M GC DQT + + +L++ K H E
Sbjct: 468 PDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGC--DQTVYTYTILIDG--LFKEHKNEE 523
Query: 571 AF---DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
A D++++ G P F + + + +A +++ +A
Sbjct: 524 ALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRACRILDELA 567
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 101/267 (37%), Gaps = 37/267 (13%)
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+ W +K +R +G++PS Y CLL LV A G ++ AV M
Sbjct: 205 LLWAWKAMRLAGVEPSRLIY--------NCLLDGLVNA----GLLDTAVNVFDAMSTEDQ 252
Query: 393 VGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
V V Y + C GR DAM + +++ P ++T+ L+ G C
Sbjct: 253 VRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVC 312
Query: 452 ISIFQHMKDHCEPN-------IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
I +FQ M++ N + + A+ K + + + + + AN++ YT L
Sbjct: 313 IGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTAL- 371
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
SM + FE M SG +LD + ++ R GK
Sbjct: 372 ------------IDSMGKFGREKEAMALFER----MKDSGLKLDSVTYGVIVNCLCRFGK 415
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEML 591
F S E G + +F+T ++
Sbjct: 416 LDEAVACFRSCQEKGIAVNAIFYTSLI 442
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 152/383 (39%), Gaps = 91/383 (23%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
+L++LG+A +P A +F+ + ++ + Y+S+ + G + +L+ RM+ +
Sbjct: 97 MLSVLGRANQPGLAQELFDR--AESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDR 154
Query: 294 PSKR--------IKNMHRKN-------------WDPVLEPDLVVYNAVLNACVPSHQWKG 332
+ IK R + L PD + YN +++AC +++
Sbjct: 155 GCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNRLSD 214
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+F+++++ G P TY + Y R G++ A + R M+++G
Sbjct: 215 AILIFEEMQRQGCDPDIWTYNAMISVYGRA------------GRVEAASSIFRIMQEQGF 262
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR------------------------HS 428
A Y + +GR ++ VE+I+ + H
Sbjct: 263 TPDAVTYNSVLHAFARDGRIEE----VERIRGMMRDARCSSDEITYNTMIHMYGKAGMHR 318
Query: 429 K--------------PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 473
K P +TFT LI + G +++ ++F+ M K P + +AM+
Sbjct: 319 KAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMI 378
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
Y++ DMF+ A+ + RA ++PD YS ML+ A E
Sbjct: 379 CAYAKADMFTDAEHTYSCMLRAG-------------VRPDLLAYSVMLDVFFKAGMPEKC 425
Query: 534 EYVYKGMALSGCQLDQTKHAWLL 556
+YK M SG + + + +A ++
Sbjct: 426 IILYKAMVGSGLKPELSVYAIMV 448
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 142/349 (40%), Gaps = 67/349 (19%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L+P+ N VL A + + K + F++L + G+ P++ T+ V+
Sbjct: 712 LQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTF------------VVIFH 759
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
AF G + EA + R M++ G + V+ L DA +V+ IK +
Sbjct: 760 AFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIK--KAGL 817
Query: 430 PLEITFTGLIISSMDG-GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKE 487
L+I +IS G + +F+ M++ C P+ T N ++ +YSRN M +A+
Sbjct: 818 ELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQA 877
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
L E + ++ P+ TY++++ A +E E V+K +A +GC+
Sbjct: 878 LLREMIKTGNA-------------PNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKP 924
Query: 548 DQTKHAWLLVEASRAGK----------------------CHLL-------------EHAF 572
D T + ++ +AG+ H+L E
Sbjct: 925 DATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVL 984
Query: 573 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA---PFHIT 618
++L E G P + +T ++ + +Y AV + M A P H+T
Sbjct: 985 ETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDACVRPTHVT 1033
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 14/164 (8%)
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
+P IT+ LI + + D I IF+ M + C+P+I T NAM+ VY R A
Sbjct: 193 RPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASS 252
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
+F G+T PD TY+S+L A A + E E + M + C
Sbjct: 253 IFRIM---QEQGFT----------PDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSS 299
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
D+ + ++ +AG E + + E G P + FT ++
Sbjct: 300 DEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLI 343
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 107/263 (40%), Gaps = 27/263 (10%)
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
W+ VF+ L++ G + + Y L+ A+ E G A A+ NM
Sbjct: 662 WQNAEIVFRDLQQHGFAGNTSAY------------SALLSAYAETGNFERATRALDNMVA 709
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
G+ A+ + G+ ++ +++ + S P TF + + G+++
Sbjct: 710 AGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGIS-PNSRTFVVIFHAFSRNGNLE 768
Query: 450 DCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
+ S+++ MK+ P+I A+L +YSR + A+EL ++ +A
Sbjct: 769 EARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAG------------ 816
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
L+ D Y+ M+ + + V+KGM GC D T L++ SR
Sbjct: 817 -LELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEA 875
Query: 569 EHAFDSLLEAGEIPHPLFFTEML 591
+ +++ G P+ +T ++
Sbjct: 876 QALLREMIKTGNAPNISTYTTLI 898
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 96/498 (19%), Positives = 183/498 (36%), Gaps = 108/498 (21%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
++D R Y ++ + GKAG +A ++ M E+ PD + + TLG+ G
Sbjct: 292 MRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRC-PDSVTFTVLIDTLGKAG 350
Query: 279 LLKELVKLIERM---RQKPSKRI-----------------KNMHRKNWDPVLEPDLVVYN 318
+ E + E M + +P+ + ++ + + PDL+ Y+
Sbjct: 351 FVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYS 410
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR----------------- 361
+L+ + + ++K + SGLKP + Y + + + +
Sbjct: 411 VMLDVFFKAGMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSVAEIENLSKEMVQS 470
Query: 362 ---------------------CLLKV---------------LVRAFWEEGKINEA---VA 382
+LK+ ++ AF GK+++A V
Sbjct: 471 SASLAALSSTLAKGGFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEASGKLSDARDLVH 530
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT-FTGLIIS 441
AV ++E A +Y LA L GR+ +A E++++ + ++++ F ++++
Sbjct: 531 AVSSIEPS---VAAHLYKRLAVMLAKAGRFSEAE---EEMRTSQTYGQVQVSDFLKVLVA 584
Query: 442 SMD-GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA---- 495
S D G D+ ++ F M + E + + + Y R A EL + A
Sbjct: 585 SYDRAGMQDEALARFLDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFDVK 644
Query: 496 NSSGYTFLSGDGAPLK------------------PDEYTYSSMLEASATAHQWEYFEYVY 537
+S+ + + LK + YS++L A A +E
Sbjct: 645 DSAMHVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRAL 704
Query: 538 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 597
M +G Q + T ++L RAGK + F L E G P+ F +
Sbjct: 705 DNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRN 764
Query: 598 SNYEKAVALINAMAYAPF 615
N E+A ++ M A F
Sbjct: 765 GNLEEARSMYRQMKEAGF 782
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 151/377 (40%), Gaps = 55/377 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLY-PDIAAYHSVAVTLGQVGLLKELVKLIE 288
+Y L+A L KA +P AL + ++M N Y + Y ++ L + G L L++
Sbjct: 12 IYNTLIAGLCKARKPRHALELLHVMAA--NGYDASVVTYTTLIDGLCKSGDLDAAQALLQ 69
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M D P++V Y A+++ + + K++ +SG +P
Sbjct: 70 KMA---------------DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPD 114
Query: 349 AATY-----GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
TY GL M + VL E G+I + V Y
Sbjct: 115 LVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVV----------------TYNTFI 158
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-C 462
LC G+ + ++E++ S P +TF +I IDD +F+ M + C
Sbjct: 159 SGLCKAGKLDKGLEMLEEMDRGGIS-PDVVTFCSIISGLCKANRIDDAFQVFKGMLERGC 217
Query: 463 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
P+ T + ML SR + +E+ E + SG+ LS TY+ ++
Sbjct: 218 VPDSLTYSIMLDNLSRANRLDTVEEVLEHMVK---SGHYALSA----------TYAPLIH 264
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
A A E + Y+ +GC ++ H + R+GK L ++ ++E+G +P
Sbjct: 265 ALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLP 324
Query: 583 HPLFFTEMLIQAIVQSN 599
+ L + +I + +S
Sbjct: 325 NLLSY-NFVIDGLCKSG 340
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 112/290 (38%), Gaps = 31/290 (10%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
D +YN ++ + + + + + +G S TY L+
Sbjct: 9 DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTY------------TTLIDGLC 56
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPL 431
+ G ++ A A ++ M G Y L LC R DA+ V+++ LR +P
Sbjct: 57 KSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRM--LRSGCEPD 114
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFSKAKELF 489
+T+ LI +DD + Q + P++ T N + + K E+
Sbjct: 115 LVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEML 174
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
EE R S PD T+ S++ A++ + V+KGM GC D
Sbjct: 175 EEMDRGGIS-------------PDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDS 221
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
++ +L SRA + +E + ++++G + LI A++++
Sbjct: 222 LTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAP-LIHALIRAG 270
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/430 (20%), Positives = 153/430 (35%), Gaps = 97/430 (22%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
+ +R +A L+ L + + + +M +G + L+ GL G
Sbjct: 4 RHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDA 63
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A ++L + D + YT L+ L KA RPH+A++ ML PD+ Y+
Sbjct: 64 AQALLQK---MADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRS-GCEPDLVTYN 119
Query: 269 SV------AVTLGQVGL-LKELVKLIERMR--------------------QKPSKRIKNM 301
S+ A + GL L+EL +IE R K + ++ M
Sbjct: 120 SLIHGLCMANRMDDAGLVLQEL--MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM 177
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
R + PD+V + ++++ +++ F VFK + + G P + TY + +++ R
Sbjct: 178 DRGG----ISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSR 233
Query: 362 -----------------------------------------------------CLLKV-- 366
C+++V
Sbjct: 234 ANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYT 293
Query: 367 ---LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
+ A GK A + M + G + Y + LC +G DA + K+
Sbjct: 294 HNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML 353
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDM 481
KP I F LI G + + + M K+ C P++ T N M+ S+
Sbjct: 354 DSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGS 413
Query: 482 FSKAKELFEE 491
+AK L EE
Sbjct: 414 LKQAKLLLEE 423
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 148/354 (41%), Gaps = 38/354 (10%)
Query: 155 AEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
A++ ++VD L + + W + M + G + + M K+++ L W +A+
Sbjct: 1445 ADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFH 1504
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
+ +D K+ V LL L K A +F + + PD +++++
Sbjct: 1505 KMDRFGVVKDTKAMNV---LLDTLCKERSVKRARGVFQEL--RGTIPPDENSFNTLVHGW 1559
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ +LKE + +E M+Q P +V Y +++ A ++ V+
Sbjct: 1560 CKARMLKEALDTMEEMKQHG---------------FSPSVVTYTSLVEAYCMEKDFQTVY 1604
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
+ ++RK P+ TY +L+ A + G+ EA+ +++ GV
Sbjct: 1605 ALLDEMRKRRCPPNVVTY------------TILMHALGKAGRTREALDTFDKLKEDGVAP 1652
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
AS Y L L GR +DA VVE++++ + P TF LI ++ D ++ + +
Sbjct: 1653 DASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIA-PNVTTFNTLISAACDHSQAENALKL 1711
Query: 455 FQHMKDH-CEPNIGTVNAMLKVYSRND----MFSKAKELFEETTRANSSGYTFL 503
M++ C P+I T +LK+ + + +F + + S YT L
Sbjct: 1712 LVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLL 1765
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 32/213 (15%)
Query: 216 VYGLKD----KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
VY L D +R + YT L+ LGKAGR EAL F+ + ED + PD + Y+S+
Sbjct: 1603 VYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKED-GVAPDASFYNSLI 1661
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
LG+ G L++ ++E MR + P++ +N +++A Q +
Sbjct: 1662 YILGRAGRLEDAYSVVEEMRTTG---------------IAPNVTTFNTLISAACDHSQAE 1706
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
+ ++ + P TY LLK+ + W + + V +M ++
Sbjct: 1707 NALKLLVKMEEQSCNPDIKTYTP--------LLKLCCKRQW----VKILLFLVCHMFRKD 1754
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
+ S Y L LC NG+ + L +E++ S
Sbjct: 1755 ISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVS 1787
>gi|218189906|gb|EEC72333.1| hypothetical protein OsI_05540 [Oryza sativa Indica Group]
Length = 747
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 116/566 (20%), Positives = 221/566 (39%), Gaps = 89/566 (15%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
++ Y +L + GR A RI+N M+ D + PD++ Y+++ G ++ ++
Sbjct: 205 RTALSYNAVLKAILCRGREAMARRIYNAMIADA-VTPDLSTYNTLIWGFGLCKKMEAALR 263
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ M+ D + PD+ YN +LNA V + + VF ++ +G
Sbjct: 264 VFGDMK---------------DHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMPGAGF 308
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
++ +Y V+++ + E GK+ EAV M ++G+ + + L
Sbjct: 309 AQNSVSY------------NVMIKGYVEAGKVEEAVGLFSEMGEKGLRLSEKTFAALMPG 356
Query: 406 LCNN-GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI------FQH- 457
LC++ GR +A ++ + R + + F L+ + G +D + + F+H
Sbjct: 357 LCDDEGRVVEARKAMDDMAERRLTPKDKSVFLRLVTTLCRAGDLDGALDVHQKSGQFKHV 416
Query: 458 ----------MKDHCEPNI--GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
M+ C G V M ++ + + S + E A + +L
Sbjct: 417 LVDPRQYGVLMESLCAGGKCDGAVEVMDELLEKGTLLSPKSPVLEGP--AYNPVIEYLCS 474
Query: 506 DGAPLKP-------------DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
+G K D+ ++S++ A E + + M G + D H
Sbjct: 475 NGNTSKAETFFRQLMKKGVDDKAAFNSLIRGHAKEGVPEAAQEILAIMTRRGVRTDPESH 534
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 612
A L+ + + + A DS++E G +P P F +++ + A ++ +M
Sbjct: 535 ALLVDSFLKKNEPADAKTALDSMMEQGHVPSPSLFMSVMVALFNGGRVQTASRVMKSM-- 592
Query: 613 APFHITERQWTELFESNEDRISRDKLEKLL------NALCNCNAASSEITVSNLSRALHA 666
E+ TE N D ++ LE L A+ N + +L + L A
Sbjct: 593 -----IEKGVTE----NMD-MAHKILEALFMRGHVEEAIGRVNLMVENGCLPDLDKLLIA 642
Query: 667 LCRSEKERDLSSSAHFGSQA---IDISPLHGIHEAFDVKETENVPSSSASMMFENADLGA 723
LC ++K + A F + S + EA +E + +P+ S +N
Sbjct: 643 LCENDKVMEAHKLADFALDRDFDVSFSTYDRVLEALYTEE-KTLPAYSMLCKIKNKGGVV 701
Query: 724 DPLPQKTDVAVDIDSINHSSLSRQAD 749
D QK A+ +DS+ S+QAD
Sbjct: 702 D---QKGCDAL-MDSLKAGGYSKQAD 723
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 102/477 (21%), Positives = 187/477 (39%), Gaps = 62/477 (12%)
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A S+L +V K K S V+T +L G H++ +F++++ N Y D +
Sbjct: 121 EAQSLLQFVVSRKGKNSASS--VFTSVLEARGT----HQSNLVFSVLM---NAYTDSGYF 171
Query: 268 ------------HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
H++ + G L + +L++ P+ + + D PD+
Sbjct: 172 SDAIQCFRLVRKHNLQIPFHSCGYLFD--RLMKLNLTSPAWAF---YEEILDCGYPPDVC 226
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+N +++ H+ +F ++ K GL+P+ ++ L+ + + G
Sbjct: 227 KFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSF------------NTLINGYCKSG 274
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLEIT 434
+++ R M + V Y L LC G+ DA L +E R P ++T
Sbjct: 275 NLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCD--RGLVPNDVT 332
Query: 435 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
FT LI G D + I+Q M + +P++ T N ++ + +AK+L E T
Sbjct: 333 FTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMT 392
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
+ LKPD++TY+ +++ E + K M G +LD
Sbjct: 393 QRG-------------LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFT 439
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM--- 610
L+ R G+ E +LEAG P +T ++ + + + L+ M
Sbjct: 440 ALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCD 499
Query: 611 AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSN-LSRALHA 666
+ P +T + L + LL+A+ N +IT + L R L A
Sbjct: 500 GHVPGVVT---YNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQA 553
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 148/354 (41%), Gaps = 38/354 (10%)
Query: 155 AEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
A++ ++VD L + + W + M + G + + M K+++ L W +A+
Sbjct: 166 ADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFH 225
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
+ +D K+ V LL L K A +F + + PD +++++
Sbjct: 226 KMDRFGVVKDTKAMNV---LLDTLCKERSVKRARGVFQELRG--TIPPDENSFNTLVHGW 280
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ +LKE + +E M+Q P +V Y +++ A ++ V+
Sbjct: 281 CKARMLKEALDTMEEMKQHG---------------FSPSVVTYTSLVEAYCMEKDFQTVY 325
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
+ ++RK P+ TY +L+ A + G+ EA+ +++ GV
Sbjct: 326 ALLDEMRKRRCPPNVVTY------------TILMHALGKAGRTREALDTFDKLKEDGVAP 373
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
AS Y L L GR +DA VVE++++ + P TF LI ++ D ++ + +
Sbjct: 374 DASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIA-PNVTTFNTLISAACDHSQAENALKL 432
Query: 455 FQHMKDH-CEPNIGTVNAMLKVYSRND----MFSKAKELFEETTRANSSGYTFL 503
M++ C P+I T +LK+ + + +F + + S YT L
Sbjct: 433 LVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLL 486
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 32/213 (15%)
Query: 216 VYGLKD----KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
VY L D +R + YT L+ LGKAGR EAL F+ + ED + PD + Y+S+
Sbjct: 324 VYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKED-GVAPDASFYNSLI 382
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
LG+ G L++ ++E MR + P++ +N +++A Q +
Sbjct: 383 YILGRAGRLEDAYSVVEEMRTTG---------------IAPNVTTFNTLISAACDHSQAE 427
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
+ ++ + P TY LLK+ + W + + V +M ++
Sbjct: 428 NALKLLVKMEEQSCNPDIKTYTP--------LLKLCCKRQW----VKILLFLVCHMFRKD 475
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
+ S Y L LC NG+ + L +E++ S
Sbjct: 476 ISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVS 508
>gi|356565780|ref|XP_003551115.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 622
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 169/412 (41%), Gaps = 78/412 (18%)
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
+ G D + ++SR TK++ IL K+G+P EA+ IF ++E + P +A Y ++ L
Sbjct: 120 FCMGKNDCQVVQSR---TKVMNILIKSGKPQEAIVIFQNLIEGGH-QPSLATYTTLLNAL 175
Query: 275 GQVGLLK---ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
K +V L+E + KP R +NA++NA +
Sbjct: 176 TTQKYFKPIHSIVSLVEEKQMKPDSRF------------------FNALVNAFAEFGNIE 217
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMESY--------------------------RRCLLK 365
V +++++SGLKPSA TY ++ Y + C
Sbjct: 218 DAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESIKLLDLMSIEGNVKPNLKTC--N 275
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ--DAMLVVEKIK 423
+L+RA + +EA V M G+ + +A NG+ +AM++ +
Sbjct: 276 MLIRALCKMEHTSEAWNVVYKMTTSGMQPDVVSFNTVAISYAQNGKTVQVEAMILEMRRN 335
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRN--- 479
L KP + T T +I G + + + +KD +PN+ +N+++ +
Sbjct: 336 GL---KPNDRTCTIIISGYCREGKVREALRFVYRIKDLGLQPNLIILNSLVNGFVDTMDR 392
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
D ++ L EE ++PD TYS+++ A + A E + +Y
Sbjct: 393 DGVNEVLNLMEEFY----------------IRPDVITYSTIMNAWSQAGFLEKCKEIYNN 436
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
M SG + D ++ L RA + E + ++G P+ + FT ++
Sbjct: 437 MLKSGVKPDGHAYSILAKGYVRAQEMEKAEELLTVMTKSGVQPNVVIFTTVM 488
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 152/367 (41%), Gaps = 50/367 (13%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
EK+ + ++ LV+ +E K V+ M +SGL + L+KG G G
Sbjct: 193 EKQMKPDSRFFNALVNAFAEFGNIEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPD 252
Query: 208 QAMSVLDWVYGLKD-KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+++ +LD + + K +LK+ L+ L K EA + M + PD+ +
Sbjct: 253 ESIKLLDLMSIEGNVKPNLKT---CNMLIRALCKMEHTSEAWNVVYKMTTS-GMQPDVVS 308
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKNW----------------- 306
+++VA++ Q G ++ +I MR+ KP+ R + +
Sbjct: 309 FNTVAISYAQNGKTVQVEAMILEMRRNGLKPNDRTCTIIISGYCREGKVREALRFVYRIK 368
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY------R 360
D L+P+L++ N+++N V + GV V + + ++P TY M ++
Sbjct: 369 DLGLQPNLIILNSLVNGFVDTMDRDGVNEVLNLMEEFYIRPDVITYSTIMNAWSQAGFLE 428
Query: 361 RC------LLK-----------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
+C +LK +L + + ++ +A + M + GV ++ +
Sbjct: 429 KCKEIYNNMLKSGVKPDGHAYSILAKGYVRAQEMEKAEELLTVMTKSGVQPNVVIFTTVM 488
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HC 462
C+ GR +AM V +K+ S L+ TF LI + + Q M++ H
Sbjct: 489 SGWCSVGRMDNAMRVFDKMGEFGVSPNLK-TFETLIWGYAEAKQPWKAEGMLQIMEEFHV 547
Query: 463 EPNIGTV 469
+P T+
Sbjct: 548 QPKKSTI 554
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 96/481 (19%), Positives = 187/481 (38%), Gaps = 78/481 (16%)
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLK-LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF 229
TA+N+ F G++ E + L++ G +++++ V +K S
Sbjct: 129 TARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTI---MKSHGVSPSVV 185
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+ LL IL K GR + A ++++ ML + PD ++ + G++ + ++
Sbjct: 186 TFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFND 245
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG--LKP 347
+ + EPD+V YN +++ + + + V K + K L P
Sbjct: 246 LSRFGC---------------EPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNP 290
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ TY L+R + + +I +A+A M +G+ Y L LC
Sbjct: 291 NVVTY------------TTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLC 338
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI 466
+++ ++E P TF L+ G++DD + +F+ M + +P+
Sbjct: 339 EARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDS 398
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T +A+++ + + KA++L ++ LSGDG KP Y+ +
Sbjct: 399 ATYSALVRSLCQGGHYEKAEDLLDKLLERK----ILLSGDGC--KPLVAAYNPI------ 446
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
F+Y+ C+ +TK A E AF L+ G P +
Sbjct: 447 ------FKYL--------CETGKTKKA---------------EKAFRQLMRRGTQDPPSY 477
Query: 587 FTEML---IQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLN 643
T ++ + +S YE V ++ F E L ++ ++ LEK+L
Sbjct: 478 KTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLR 537
Query: 644 A 644
+
Sbjct: 538 S 538
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 118/532 (22%), Positives = 208/532 (39%), Gaps = 94/532 (17%)
Query: 172 AKNWK----FVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRD 224
A NWK + M ++G+ + T +L LK + + +A+S + + G D
Sbjct: 94 AGNWKKALELCKKMTENGVGPDLVTHNIVLSALK---NGAQYSKAISYFEIMKGANVTSD 150
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVA---VTLGQVGLL 280
F ++ L K G+ EA+ +FN M E PD+ Y S+ GQV
Sbjct: 151 ---TFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENC 207
Query: 281 KELVKLIERMRQKPSKRIKN----------MHRKNWDPV-------LEPDLVVYNAVLNA 323
K + L+ KP+ N MHR+ L PD+V Y ++LNA
Sbjct: 208 KAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNA 267
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
S Q + VF +++K+ KP+ +Y L+ A+ G + EAV
Sbjct: 268 YGRSAQPEKAREVFNKMKKNSCKPNKVSY------------NALIDAYGSAGMLKEAVGL 315
Query: 384 VRNMEQRGV-VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE---ITFTGLI 439
+ ME+ G+ S+ LA C GR + + +E I S+ ++ + + I
Sbjct: 316 LHEMEKDGIQPDVVSISTLLAAC----GRCRQ-ITRIETILEAARSRGIDLNTVAYNSGI 370
Query: 440 ISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
S + G + + ++ M++ + +P+ T N ++ S+ ++++ FE+ + S
Sbjct: 371 KSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVS 430
Query: 499 GY----------------------TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
TF S + PD TY+++++A W+ +
Sbjct: 431 STKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDL 490
Query: 537 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 596
+K M ++G D A C L AF+ + GE L E + + +
Sbjct: 491 FKEMEVNGIPPD-------------AIICSSLMEAFN---KGGEPERVLQLMEFMKKKSI 534
Query: 597 QSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNC 648
N + +I + T + E +S+ IS L +LN L C
Sbjct: 535 PLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKC 586
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 112/256 (43%), Gaps = 27/256 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ P YN V+NAC + WK + K++ ++G+ P T+ +++
Sbjct: 77 IPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTH------------NIVLS 124
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
A + ++A++ M+ V + CL G+ +A+ + ++ R
Sbjct: 125 ALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKC 184
Query: 430 PLE-ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
P + +T+T ++ S G +++C +IF M + +PNI N++L Y+ M +A
Sbjct: 185 PPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALA 244
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
+F + +G L+PD +Y+S+L A + Q E V+ M + C+
Sbjct: 245 IFN-----------LIKKNG--LRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKP 291
Query: 548 DQTKHAWLLVEASRAG 563
++ + L+ AG
Sbjct: 292 NKVSYNALIDAYGSAG 307
>gi|298705285|emb|CBJ48975.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 674
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 147/338 (43%), Gaps = 52/338 (15%)
Query: 172 AKNWKFV-RIMNQ---SGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
A+ W V RIM+Q + + + G G W + + LD + +D+ +
Sbjct: 263 ARQWHHVLRIMDQMQEDEVWVDKYAYTTAIHAAGQLGKWARCVRYLDEMDSNGVAKDVVT 322
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
V ++ G+ +A ++ ML+D L P++ Y S+ V L + G + +K++
Sbjct: 323 VSV---AISACADKGQWAQAEKLLEDMLDD-GLTPNVITYTSLMVVLRRGGQHERAIKIL 378
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ MR K + P++ Y+ + AC + +W+ + K++ + G+ P
Sbjct: 379 DLMRSKG---------------VMPNVRTYSVAIAACADAKEWRRALALLKEMEREGVSP 423
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ +Y A +RA + G+++EA+ + ME RGV + V Y A C
Sbjct: 424 NEISYNTA------------IRACGDAGQLSEALDLMDEMESRGVKASV-VTYGTAVAAC 470
Query: 408 NNGRWQDAMLVVEKIKSLRHSK--PLEITFTGLIISS----------MDGGHIDDCISIF 455
R D + +E + ++R + P EI + G+I + +D I++ I +F
Sbjct: 471 Q--RAADWKMALELLAAMRREQIEPNEIVYGGIIKACCAAGQASKALVDADQIEEAIQLF 528
Query: 456 QHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+ + +C I + ++ +R + +A LF+E
Sbjct: 529 NKLQARRNCSVTIHSYTPLVDALTRELRWQEAIMLFQE 566
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 127/307 (41%), Gaps = 32/307 (10%)
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-GLKPSAATYGLAMESYRRCLLKV 366
P +EP++V YN V+ AC + + K +F+++ K G++P+ TYG
Sbjct: 103 PAVEPNVVSYNNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYG------------A 150
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L+ A + G ++V + M Q G+ A +Y + + +WQ A V+ ++++R
Sbjct: 151 LISACAKRGNWEDSVNYLEQMRQSGLAPNAVIYSTVISACERSDQWQKA---VKLLRTMR 207
Query: 427 HSK--PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 483
P+ +T+ +I + G +S+ M D C P T + + R +
Sbjct: 208 RDGILPVTVTYNTVISACGKSGQWSLAVSLLDEMSDMGCPPGPVTFASAMLACERARQWH 267
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
+ ++ + D+Y Y++ + A+ +W M +
Sbjct: 268 HVLRIMDQMQEDE-------------VWVDKYAYTTAIHAAGQLGKWARCVRYLDEMDSN 314
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
G D + + + G+ E + +L+ G P+ + +T +++ +E+A
Sbjct: 315 GVAKDVVTVSVAISACADKGQWAQAEKLLEDMLDDGLTPNVITYTSLMVVLRRGGQHERA 374
Query: 604 VALINAM 610
+ +++ M
Sbjct: 375 IKILDLM 381
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 71/383 (18%), Positives = 141/383 (36%), Gaps = 80/383 (20%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ A + A IF M ++ + P++ Y ++ + G ++ V +E+M
Sbjct: 112 YNNVITACANAKKQKRAEGIFREMTKERGIRPNVFTYGALISACAKRGNWEDSVNYLEQM 171
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
RQ L P+ V+Y+ V++AC S QW+ + + +R+ G+ P
Sbjct: 172 RQSG---------------LAPNAVIYSTVISACERSDQWQKAVKLLRTMRRDGILPVTV 216
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY ++ A + G+ + AV+ + M G V + A C
Sbjct: 217 TY------------NTVISACGKSGQWSLAVSLLDEMSDMG-CPPGPVTFASAMLACERA 263
Query: 411 R-WQDAMLVVEKI--------------------------KSLRHSKPLE--------ITF 435
R W + +++++ + +R+ ++ +T
Sbjct: 264 RQWHHVLRIMDQMQEDEVWVDKYAYTTAIHAAGQLGKWARCVRYLDEMDSNGVAKDVVTV 323
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
+ I + D G + + M D PN+ T +++ V R +A ++ +
Sbjct: 324 SVAISACADKGQWAQAEKLLEDMLDDGLTPNVITYTSLMVVLRRGGQHERAIKILD---- 379
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
+ G + P+ TYS + A A A +W + K M G ++ +
Sbjct: 380 -------LMRSKG--VMPNVRTYSVAIAACADAKEWRRALALLKEMEREGVSPNEISYNT 430
Query: 555 LLVEASRAGKCHLLEHAFDSLLE 577
+ AG+ L A D + E
Sbjct: 431 AIRACGDAGQ---LSEALDLMDE 450
>gi|357519615|ref|XP_003630096.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524118|gb|AET04572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 635
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 172/426 (40%), Gaps = 91/426 (21%)
Query: 156 EAIRVLVDRLSEREMTAKNW-KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
E +R+L ++S++E K K+V+++ TE L L + LG W Q + V
Sbjct: 53 ELVRLLTRKISDKEPLLKTLNKYVKLVR------TEHCFL-LFEELGKHDKWLQCLEVFR 105
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS-VAVT 273
W+ + + + VY+KL++++GK G+ A+ +F+ M + PD + Y+S ++
Sbjct: 106 WMQ--RQRWYIADNGVYSKLISVMGKKGQIRLAMWLFSEM-RNTGCRPDTSVYNSLISAH 162
Query: 274 LGQVGLLKELVKLIERM-RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
L K LVK + + K ++R K P++V YN +L A +
Sbjct: 163 LHSRDKSKALVKALGYFEKMKTTERCK------------PNIVTYNILLRAFAQARDVNQ 210
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
V ++FK L +S + P T+ M+ Y + G I E + + M+ V
Sbjct: 211 VNYLFKDLDESSVSPDIYTFNGVMDGYGK------------NGMIREMESVLVRMKSNQV 258
Query: 393 VGTASVYYELACCLCNNGRWQ--DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
Y L + + G+ Q D M V K S KP TF +I++ D
Sbjct: 259 KLDLITYNLL---IDSYGKKQQFDKMEQVFKSLSRSKEKPTLPTFNSMILNYGKARLKDK 315
Query: 451 CISIFQHMKDH--------------------CEPN----------------IGTVNAMLK 474
++FQ+M D C N + T+NAML
Sbjct: 316 AENVFQNMTDMGYTPSFVTHESLIHMYGLCGCVSNAVELFDQLIESKVPIKVSTLNAMLD 375
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
VY N + +A LF TRA S + PD TY + +A A+ E +
Sbjct: 376 VYCINGLQQEADSLF---TRAKS----------IKIFPDATTYKLLYKAYTKANSKELLD 422
Query: 535 YVYKGM 540
+ K M
Sbjct: 423 KLLKQM 428
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 162/417 (38%), Gaps = 88/417 (21%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L R +A+ + M +DC + PD+ Y ++ L + V+L+ M
Sbjct: 97 YTTLMRALCADRRAAQAVGLLRSM-QDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEM 155
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ +EP++VVY+ +L+ + +W+ V VF+++ G++P
Sbjct: 156 ---------------CESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVV 200
Query: 351 TYGLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNM 387
Y ++S R VL+ + +EG + EA+ +NM
Sbjct: 201 MYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNM 260
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
++GV Y L L + +AM L+ E ++ +P +TF +I G
Sbjct: 261 SEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIG 320
Query: 447 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
+ + + M ++ C N+ N ++ R KA EL +E SSG
Sbjct: 321 WMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMA---SSG------ 371
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFE-----------------YV--YKGMALSG-- 544
L+PD +TYS ++ Q E E Y+ K M G
Sbjct: 372 ----LQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMM 427
Query: 545 -------------CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
C+LD ++ ++ A ++G+ + E +++ G IP + ++
Sbjct: 428 GQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYS 484
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 143/380 (37%), Gaps = 70/380 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G G W V + + G + D+ +YT L+ L + G+ +A R+ ++M
Sbjct: 170 LLHGYCKTGRWESVGKVFEEMSGRGIEPDV---VMYTALIDSLCRHGKVKKAARVMDMMT 226
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNWDPVLE- 311
E L P++ Y+ + ++ + G ++E + L + M +K P N VLE
Sbjct: 227 ER-GLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEM 285
Query: 312 ------------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
PDL+ +N+V+ H + W+ + L+
Sbjct: 286 DEAMALLEEMMQGETRVRPDLMTFNSVI------HGLCKIGWMRQALQ---------VRA 330
Query: 354 LAMESYRRCLL---KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+ E+ RC L +L+ K+ +A+ + M G+ + Y L C
Sbjct: 331 MMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCK-- 388
Query: 411 RWQDAMLVVEKIKS----LRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP 464
M VE+ +S +RH +P + + L+ + D G + +F M +C+
Sbjct: 389 -----MRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKL 443
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
+ + M+ ++ A+E ++ L PD TYS +
Sbjct: 444 DAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEG-------------LIPDAVTYSIPINMF 490
Query: 525 ATAHQWEYFEYVYKGMALSG 544
A + E V K M SG
Sbjct: 491 AKSGDLAAAERVLKQMTASG 510
>gi|168036199|ref|XP_001770595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678116|gb|EDQ64578.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/408 (20%), Positives = 159/408 (38%), Gaps = 68/408 (16%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
K + G+ G+ EA I + M E ++ + Y+S+ G+ GL ++ ++L E+M++
Sbjct: 155 KQMNTYGQQGKIEEAEHIMDTM-ERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKE 213
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
LEPD V Y+ ++ AC + + + F+ +++ G+ P+++ +
Sbjct: 214 AG---------------LEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSNF 258
Query: 353 GLAMESYRRC-----------------------LLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+ Y + L +VRA+ G+ + V + + +
Sbjct: 259 NTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLRE 318
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
G V Y L ++A+ V ++ + P E LI + D G +
Sbjct: 319 AGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMA-PKEYMCRSLICACKDAGMFE 377
Query: 450 DCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELF----EETTRANSSGYTFLS 504
D ++F+ M+ P++ T M+ V+ +A+ELF ++ + Y +
Sbjct: 378 DATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNVII 437
Query: 505 G---------------------DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
DG L PD YTY SML + E +Y + S
Sbjct: 438 NVYMRYGMHEEAFRIYKLMEEEDG--LLPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNS 495
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+LD+ +L +R + F +++ G IP+ + F M+
Sbjct: 496 DVELDEVMCNCVLNTCARFLPLEEVHKIFQEMIDVGCIPNTITFNVMI 543
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 153/375 (40%), Gaps = 54/375 (14%)
Query: 201 GDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNL 260
G KG +QA + + K D+ Y ++ + + G EA RI+ LM E+ L
Sbjct: 406 GLKGDVKQAEELFRSLRSSVSKLDI---IAYNVIINVYMRYGMHEEAFRIYKLMEEEDGL 462
Query: 261 YPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAV 320
PD YHS+ + L + ++ R+R +E D V+ N V
Sbjct: 463 LPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNSD---------------VELDEVMCNCV 507
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA 380
LN C + V +F+++ G P+ T+ V++ + + G ++ A
Sbjct: 508 LNTCARFLPLEEVHKIFQEMIDVGCIPNTITF------------NVMIDLYGKSGMLDRA 555
Query: 381 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD---AMLVVEKIKSLRHSKPLEITFTG 437
A + +Q GV + + + + G+ QD + ++++ H LE +
Sbjct: 556 RDASKLAQQLGVADKIT----FSTLINSYGKKQDFRNMEATLWEMQNAGHGGSLE-AYNC 610
Query: 438 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
++ + GH+D + M K + ++ + N ++ +Y R+ ++ + LF +
Sbjct: 611 VLDAYGKAGHLDKLEDVIARMEKSGLQMDLASYNILINIYGRHTKIAEMEALFH---KMQ 667
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
G+ PD +TY++M+ A + +K M SG D+ + L+
Sbjct: 668 EEGFI----------PDRWTYNTMIRTYGYADYPDKAVDTFKMMQDSGIMPDRVTYVMLV 717
Query: 557 VEASRAGKCHLLEHA 571
+AG +LLE A
Sbjct: 718 AAFEKAG--NLLEAA 730
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 75/185 (40%), Gaps = 22/185 (11%)
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
+P +T++ +++ G ++D F HM + +AM+ +Y+R F KA+++
Sbjct: 78 QPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQVVAAYSAMIAIYTRCGFFEKAEKI 137
Query: 489 FEET-------TRANSSGYTFLSGDGAPLKPDEYT---------------YSSMLEASAT 526
E+ R N G ++ E+ Y+SM+ A
Sbjct: 138 MEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTMERLGMHLGVVGYNSMITAYGK 197
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
A +E +++ M +G + D+ ++ ++ RAGK F ++ G +P
Sbjct: 198 AGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSN 257
Query: 587 FTEML 591
F ++
Sbjct: 258 FNTLI 262
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 146/350 (41%), Gaps = 61/350 (17%)
Query: 222 KRDLKSRFVYTK--LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
KRD K VYT LL L K R A ++ + + + PD+ +Y +V ++ ++G
Sbjct: 176 KRDGKEPNVYTYNILLKALCKNNRVDGACKLL-VEMSNKGCEPDVVSYTTVISSMSKLGK 234
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
++E +L R +P++ VYNA++N ++ K VF + Q
Sbjct: 235 VEEARELSIR--------------------FQPNVSVYNALINGFCREYKVKEVFLLLGQ 274
Query: 340 LRKSGLKPSAATYGLAMES------------------YRRCLLKV-----LVRAFWEEGK 376
+ + G+ P+ TY + S R C V L++ ++ G+
Sbjct: 275 MVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGR 334
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
+ EA+ M + G Y L LC++G+ +A+ V K++ P T+
Sbjct: 335 VLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMER-NGCSPNVSTYG 393
Query: 437 GLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
LI G + I+ + M + C PN+ +M+ V R+ MFS+A L E+
Sbjct: 394 ALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEK---- 449
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+S D P P+ T+++ ++ + + E ++ M GC
Sbjct: 450 -------MSTDNCP--PNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGC 490
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/365 (18%), Positives = 158/365 (43%), Gaps = 50/365 (13%)
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
+ +V T +VGL ++ +K+ R+R+ +P + +YN +L+A +
Sbjct: 117 FINVINTYRRVGLAEQALKMFYRIREFGC---------------QPTVKIYNHLLDAMLS 161
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-------CLLKVLVRAFWEEGKINE 379
++++ + ++ +++ G +P+ TY + +++ + C L V + E +
Sbjct: 162 ENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVS 221
Query: 380 AVAAVRNMEQRGVVGTA-----------SVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
+ +M + G V A SVY L C + ++ L++ ++ +
Sbjct: 222 YTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVE-KGI 280
Query: 429 KPLEITFTGLIISSMDG-GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
P IT++ +ISS+ G G+++ ++++ M C PN+ T +++K Y M +
Sbjct: 281 DPNVITYS-TVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYF---MRGRVL 336
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
E R G+ +P+ Y++++ + + V M +GC
Sbjct: 337 EALNIWNRMAEEGF----------EPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCS 386
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
+ + + L+ ++AG ++ ++ G IP+ + +T M+ S + +A +L
Sbjct: 387 PNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSL 446
Query: 607 INAMA 611
I M+
Sbjct: 447 IEKMS 451
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 133/332 (40%), Gaps = 43/332 (12%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
++ KAG P A+R F M + L P + +V + LG G E L E +R+
Sbjct: 247 IIVGFSKAGDPTRAMR-FLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIREN 305
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
LEP YNA+L V + K +V ++ K+G+KP TY
Sbjct: 306 G---------------LEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYS 350
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
L ++ Y WE +I ++ ME V + V+ + + G WQ
Sbjct: 351 LLIDVYAHA-------GRWESARI-----VLKEMEASNVQPNSYVFSRILANYRDKGEWQ 398
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAM 472
+ V++ +KS +P + +I + +D ++ F+ M + P+I T N +
Sbjct: 399 KSFQVLKDMKS-SGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTL 457
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
+ + ++ A+ELF E + GY+ P TY+ M+ + +WE
Sbjct: 458 IDCHCKSGRHDMAEELFSEMQQ---RGYS----------PCITTYNIMINSMGEQQRWEQ 504
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
M G Q + + L+ ++G+
Sbjct: 505 VTAFLSKMQSQGLQPNSITYTTLVDVYGKSGR 536
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 167/431 (38%), Gaps = 75/431 (17%)
Query: 193 MLKLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRI 250
M ++ G G +AM L GL K ++ LG +GR HEA +
Sbjct: 244 MNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPS-----TLVAVILALGNSGRTHEAEAL 298
Query: 251 FNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE---LVKLIERMRQKPSKRIKNM------ 301
F + E+ L P AY+++ + G LK+ +V +E+ KP ++ ++
Sbjct: 299 FEEIREN-GLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYA 357
Query: 302 HRKNWDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
H W+ ++P+ V++ +L +W+ F V K ++ SG++P
Sbjct: 358 HAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRH 417
Query: 351 TYGL-------------AMESYRRCLLK----------VLVRAFWEEGKINEAVAAVRNM 387
Y + AM ++ R L + L+ + G+ + A M
Sbjct: 418 FYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEM 477
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+QRG + Y + + RW+ + K++S + +P IT+T L+ G
Sbjct: 478 QQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQS-QGLQPNSITYTTLVDVYGKSGR 536
Query: 448 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT------------- 493
D I + +K +P NA++ Y++ + A F T
Sbjct: 537 FSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNS 596
Query: 494 --------RANSSGYTFLS-GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
R ++ + L ++PD TY+++++A +++ VY+ M SG
Sbjct: 597 LINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVASG 656
Query: 545 CQLDQTKHAWL 555
C D+ A L
Sbjct: 657 CTPDRKARAML 667
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 112/284 (39%), Gaps = 27/284 (9%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLV 368
VL P + YNA++ AC + + + ++R+ G +P Y +++ L
Sbjct: 166 VLTP--LTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYS--------SIIQYLT 215
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
R+ + I + + A +E + + ++ G AM + +S
Sbjct: 216 RSNKIDSPILQKLYA--EIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQS-NGL 272
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKE 487
P T +I++ + G + ++F+ ++++ EP NA+LK Y R A+
Sbjct: 273 NPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEF 332
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
+ E +A +KPDE TYS +++ A A +WE V K M S Q
Sbjct: 333 VVSEMEKAG-------------VKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQP 379
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + +L G+ + +G P F+ M+
Sbjct: 380 NSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMI 423
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 121/545 (22%), Positives = 205/545 (37%), Gaps = 91/545 (16%)
Query: 102 EFAGDNL--KRENLRELKEMFEKDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIR 159
EF G L K ++ R LK E+ NWV +D G DY +K WH E+ +A R
Sbjct: 218 EFHGRVLTVKLDDGRRLKAKAEERKNWVYGED---GKDYRSK---WHEERE--GSTKAFR 269
Query: 160 VLVDRLSEREMTAKNWK-----FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
++D E NW+ F RI S F G M+ GD RQ
Sbjct: 270 KVLDTQPE------NWQAVVSAFERIKKPSRREF--GLMVGYYARRGDMHRARQTFE--- 318
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
++ + S VYT L+ EAL M E+ + + Y V
Sbjct: 319 ---SMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEE-GIEMSLVTYSIVVGGF 374
Query: 275 GQVGLLKELVKLIERMRQKPSK--------------------RIKNMHRKNWDPVLEPDL 314
+ G + ++ +++ + R + + R+ + ++ L
Sbjct: 375 AKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPL 434
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-----------L 363
+Y+ +++ + VFK+L++ G PS TYG + Y + +
Sbjct: 435 DIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKM 494
Query: 364 LK------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
+K +L+ F + A A ++ + G+ +Y + C G
Sbjct: 495 MKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGN 554
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 470
A+ +V++++ R +P TF +I G + + IF M + C P + T N
Sbjct: 555 MDRAIHMVKEMQKER-CRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFN 613
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA-SATAHQ 529
A++ KA E+ +E A S PDE+TY++++ +A
Sbjct: 614 ALVLGLVEKRKMEKAVEILDEMALAGVS-------------PDEHTYTTIMHGYAALGDT 660
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
+ FEY K M G QLD + LL ++G+ A + A +IP F
Sbjct: 661 GKAFEYFTK-MRNEGLQLDVFTYEALLKACCKSGRMQ-SALAVTREMNAQKIPRNTFVYN 718
Query: 590 MLIQA 594
+LI
Sbjct: 719 ILIDG 723
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 152/382 (39%), Gaps = 65/382 (17%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G +A+ V + + K ++K+ Y+ L+ K A +F +++D L PD
Sbjct: 483 GKVSKALEVSKMMKSVGIKHNMKT---YSMLINGFLKLKDWTNAFAVFEDVIKD-GLKPD 538
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERM---RQKPSKR--------------------IKN 300
+ Y+++ +G + + +++ M R +P+ R I +
Sbjct: 539 VVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFD 598
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
M R++ P + +NA++ V + + + ++ +G+ P TY M Y
Sbjct: 599 MMRRSG---CIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYA 655
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
A + GK E +RN G+ Y L C +GR Q A+ V
Sbjct: 656 ---------ALGDTGKAFEYFTKMRN---EGLQLDVFTYEALLKACCKSGRMQSALAVTR 703
Query: 421 KIKSLRHSKPLEITFTGLIISSMDG----GHIDDCISIFQHM-KDHCEPNIGTVNAMLKV 475
++ + + + TF I+ +DG G I + + Q M ++ +P+I T + +
Sbjct: 704 EMNAQKIPRN---TFVYNIL--IDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINA 758
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
+ +A + EE + A +KP+ TY++++ A A E
Sbjct: 759 CCKAGDMLRATKTMEEM-------------EAAGVKPNVKTYTTLIHGWANASLPEKALS 805
Query: 536 VYKGMALSGCQLDQTKHAWLLV 557
++ + L+G + D+ + L+
Sbjct: 806 CFEELKLAGLKPDKAVYHCLMT 827
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 50/271 (18%), Positives = 102/271 (37%), Gaps = 32/271 (11%)
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL 248
T + ++ G G R+A+ + D ++ + + + L+ L + + +A+
Sbjct: 573 TSRTFMPIIHGFARAGEMRRALEIFDM---MRRSGCIPTVHTFNALVLGLVEKRKMEKAV 629
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP 308
I + M + PD Y ++ +G + + +MR +
Sbjct: 630 EILDEMAL-AGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEG-------------- 674
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLV 368
L+ D+ Y A+L AC S + + V +++ + + Y + ++ + R
Sbjct: 675 -LQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWAR------- 726
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
G I EA ++ M Q GV Y C G A +E++++
Sbjct: 727 -----RGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAA-GV 780
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
KP T+T LI + + +S F+ +K
Sbjct: 781 KPNVKTYTTLIHGWANASLPEKALSCFEELK 811
>gi|125558386|gb|EAZ03922.1| hypothetical protein OsI_26055 [Oryza sativa Indica Group]
Length = 658
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 168/404 (41%), Gaps = 75/404 (18%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
SR +Y LL L AG A+ +F+ M + + PD+ +Y+ + + G + +
Sbjct: 221 SRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMAR 280
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV----FKQLRK 342
+ M+++ L PD V Y ++ H +G F V F+++ +
Sbjct: 281 LSEMQEQAK--------------LTPDKVTYLTLMQC----HYSEGTFPVCIGLFQEMEE 322
Query: 343 SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
G+ + + ++ A ++GK E +A M +RG A++Y L
Sbjct: 323 RGMGNDIPQHAYVL----------VIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTAL 372
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-- 460
+ GR ++AM + E++K +GL + S+ G I +C+ F + +
Sbjct: 373 IDSMGKFGREKEAMALFERMKD-----------SGLKLDSVTYGVIVNCLCRFGKLDEAV 421
Query: 461 ----HCEPNIGTVNAMLKV-----YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 511
C+ VNA+ + + M ++KELFEE + G+
Sbjct: 422 ACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMI---AKGFV---------- 468
Query: 512 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW-LLVEASRAGKCHLLEH 570
PD Y Y+ +++ A + + + +YK M GC DQT + + +L++ K H E
Sbjct: 469 PDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGC--DQTVYTYTILIDG--LFKEHKNEE 524
Query: 571 AF---DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
A D++++ G P F + + + +A +++ +A
Sbjct: 525 ALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRACRILDELA 568
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 101/267 (37%), Gaps = 37/267 (13%)
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+ W +K +R +G++PS Y CLL LV A G ++ AV M
Sbjct: 206 LLWAWKAMRLAGVEPSRLIY--------NCLLDGLVNA----GLLDTAVNVFDAMSTEDQ 253
Query: 393 VGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
V V Y + C GR DAM + +++ P ++T+ L+ G C
Sbjct: 254 VRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVC 313
Query: 452 ISIFQHMKDHCEPN-------IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
I +FQ M++ N + + A+ K + + + + + AN++ YT L
Sbjct: 314 IGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTAL- 372
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
SM + FE M SG +LD + ++ R GK
Sbjct: 373 ------------IDSMGKFGREKEAMALFER----MKDSGLKLDSVTYGVIVNCLCRFGK 416
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEML 591
F S E G + +F+T ++
Sbjct: 417 LDEAVACFRSCQEKGIAVNAIFYTSLI 443
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 165/427 (38%), Gaps = 52/427 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
V +D + +WKF M GLM + ++ L +A+ + + L
Sbjct: 270 VCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQ---L 326
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ R + + Y ++ G AG+ EA + ++ P + AY+ + LG+
Sbjct: 327 EQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSI-PSVIAYNCILTCLGKKRR 385
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
++E +++ E M++ D V P++ YN +++ + +
Sbjct: 386 VEEALRIFEEMKR--------------DAV--PNVPTYNILIDMLCREGKLNAALEIRDD 429
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ ++GL P+ T + +++ + K+ EA + M+ + A +
Sbjct: 430 MERAGLFPNVLT------------VNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTF 477
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 458
L L GR DA + EK+ H P I +T LI S G +D I++ M
Sbjct: 478 SSLIDGLGKCGRVDDAYSLYEKMLDCGHV-PGAIVYTSLIRSFFKCGRKEDGHKIYKEMV 536
Query: 459 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
C P++ +N + + K + LF E N+ G+ PD +YS
Sbjct: 537 HTGCSPDLTLINTYMDCVFKAGETEKGRALFREI---NAHGFI----------PDARSYS 583
Query: 519 SMLEASATAHQW-EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
++ A E +E Y M GC LD + ++ ++GK + A+ L E
Sbjct: 584 ILIHGLVKAGLANETYELFY-AMKEQGCVLDTHAYNAVIDGFCKSGK---VNKAYQLLEE 639
Query: 578 AGEIPHP 584
HP
Sbjct: 640 MKVKGHP 646
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/361 (18%), Positives = 151/361 (41%), Gaps = 42/361 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L + P L +F+ M ++ ++ + ++ + G + + L++ M
Sbjct: 198 YTILIGALSEVREPDPMLILFHQM-QELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEM 256
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ L+ D+V+YN ++ + + + F +++ GL P
Sbjct: 257 KSNS---------------LDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDV 301
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY ++ VL +A +++EAV +EQ V A Y + + G
Sbjct: 302 TY--------TSMIGVLCKA----NRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAG 349
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVN 470
++ +A ++E+ K+ + S P I + ++ +++ + IF+ MK PN+ T N
Sbjct: 350 KFDEAYGLLERQKA-KGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYN 408
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
++ + R + A E+ ++ RA L P+ T + M++ A +
Sbjct: 409 ILIDMLCREGKLNAALEIRDDMERAG-------------LFPNVLTVNIMIDRLCKAQKL 455
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
E +++GM C + + L+ + G+ ++ +L+ G +P + +T +
Sbjct: 456 EEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL 515
Query: 591 L 591
+
Sbjct: 516 I 516
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 145/343 (42%), Gaps = 48/343 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ L+ L KAG +E +F M E C L D AY++V + G + + +L+E
Sbjct: 582 YSILIHGLVKAGLANETYELFYAMKEQGCVL--DTHAYNAVIDGFCKSGKVNKAYQLLEE 639
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ K P +V Y +V++ + + +F++ + +G+K +
Sbjct: 640 MKVKGHP---------------PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNV 684
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
Y L+ F + G+I+EA + + Q+G+ + L L
Sbjct: 685 VVY------------SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA 732
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
+A++ + +K L+ P +IT++ LI + +Q M K +PN T
Sbjct: 733 EEINEALICFQSMKDLK-CPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTIT 791
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
M+ ++ +A LF +R ++G PD +Y++M+E ++A+
Sbjct: 792 YTTMISGLAKAGNILEASGLF---SRFKANGGI----------PDSASYNAMIEGLSSAN 838
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
+ +++ L GC + TK +L++A +C LE A
Sbjct: 839 KAMDAYALFEETRLKGCNI-HTKTCVVLLDALHKAEC--LEQA 878
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 86/443 (19%), Positives = 169/443 (38%), Gaps = 76/443 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G G + +A +L+ K K + S Y +L LGK R EALRIF M
Sbjct: 341 MIMGYGSAGKFDEAYGLLER---QKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK 397
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKL---IERMRQKPSKRIKNMHRKNW------ 306
D P++ Y+ + L + G L +++ +ER P+ N+
Sbjct: 398 RDA--VPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKL 455
Query: 307 -----------DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
D V P+ V ++++++ + + +++++ G P A Y
Sbjct: 456 EEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVY--- 512
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+R+F++ G+ + + M G ++ C+ G +
Sbjct: 513 ---------TSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKG 563
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 474
+ +I + P +++ LI + G ++ +F MK+ C + NA++
Sbjct: 564 RALFREINA-HGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVID 622
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
+ ++ +KA +L EE + G P P TY S+++ A
Sbjct: 623 GFCKSGKVNKAYQLLEE-----------MKVKGHP--PTVVTYGSVIDGLA--------- 660
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA----GEIPHPLFFTEM 590
++D+ A++L E +++ L + SL++ G I E
Sbjct: 661 -----------KIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 709
Query: 591 LIQAIVQSNYEKAVALINAMAYA 613
L+Q + N L++A+ A
Sbjct: 710 LMQKGLTPNVYTWNCLLDALVKA 732
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 51/294 (17%), Positives = 113/294 (38%), Gaps = 44/294 (14%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
+A + +L+ L + + + ++ M + G + ++ G G +A +L
Sbjct: 578 DARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLL 637
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+ +K K + Y ++ L K R EA +F + + ++ Y S+
Sbjct: 638 EE---MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN-GIKLNVVVYSSLIDG 693
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE---------------------- 311
G+VG + E ++E + QK N++ W+ +L+
Sbjct: 694 FGKVGRIDEAYLIMEELMQK--GLTPNVY--TWNCLLDALVKAEEINEALICFQSMKDLK 749
Query: 312 --PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
P+ + Y+ ++N ++ F +++++K GLKP+ TY ++
Sbjct: 750 CPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITY------------TTMIS 797
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
+ G I EA + G + ++ Y + L + + DA + E+ +
Sbjct: 798 GLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETR 851
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 150/369 (40%), Gaps = 48/369 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL AM ++ + + + + F Y LL L R EAL + ++M
Sbjct: 133 LLKGLCADKRTSDAMDIV--LRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMA 190
Query: 256 ED--CNLYPDIAAYHSVAVTLGQVGLLKELV--KLIERMRQKPSKRIKNMHRKNWDPVLE 311
+D PD+ +Y++V G KE + KL + K + + M + +
Sbjct: 191 DDRGGGSPPDVVSYNTVLN-----GFFKEGIQTKLTAQAMDKAMEVLNTMVKNG----VM 241
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD + YN++L+ S Q K K++R G++P+ TY L+
Sbjct: 242 PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY------------SSLMNYL 289
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR---HS 428
+ G+ EA +M +RG+ + Y L C GR ++ EK+ L
Sbjct: 290 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIES----EKLFDLMVRIGV 345
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKE 487
KP IT+ LI G +D+ + M +P+I T ++ Y R A
Sbjct: 346 KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA 405
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
LF+E SSG + P+ TY+ +L+ + + +Y + SG QL
Sbjct: 406 LFKEMV---SSG----------VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 452
Query: 548 DQTKHAWLL 556
+ + + +L
Sbjct: 453 ELSTYNIIL 461
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 133/325 (40%), Gaps = 53/325 (16%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ L+ L K GR EA +IF+ M + L PDIA Y ++ + G + E KL +
Sbjct: 281 TYSSLMNYLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQGHCKEGRVIESEKLFDL 339
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M RI ++PD++ YN +++ C + + + + G+KP
Sbjct: 340 M-----VRIG----------VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 384
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TYG L+ + ++++A+A + M GV Y + L +
Sbjct: 385 VTYG------------TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 432
Query: 410 GRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHI-DDCISIFQHMKDHCEPNIG 467
R A L V KS LE++ +I+ + ++ D+ + +FQ++ C ++
Sbjct: 433 RRTAAAKELYVSITKS---GTQLELSTYNIILHGLCKNNLTDEALRMFQNL---CLTDLQ 486
Query: 468 ----TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
T N M+ + +AK+LF + AN L PD TYS M E
Sbjct: 487 LETRTFNIMIGALLKCGRMDEAKDLFAAHS-ANG------------LVPDVRTYSLMAEN 533
Query: 524 SATAHQWEYFEYVYKGMALSGCQLD 548
E + ++ M +GC D
Sbjct: 534 LIEQGSLEELDDLFLSMEENGCSAD 558
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 61/366 (16%), Positives = 137/366 (37%), Gaps = 66/366 (18%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQL---RKSGLKPSAATYGLAMESYRRCLLKVLV 368
PD+ YN +L ++ + + + R G P +Y + + K +
Sbjct: 161 PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGF----FKEGI 216
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
+ +++A+ + M + GV+ Y + C++G+ ++A+ ++K++S
Sbjct: 217 QTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRS---- 272
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
D EPN+ T ++++ +N ++A+++
Sbjct: 273 -------------------------------DGVEPNVVTYSSLMNYLCKNGRSTEARKI 301
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F+ T+ L+PD TY ++L+ + E ++ M G + D
Sbjct: 302 FDSMTKRG-------------LEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPD 348
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+ L+ AGK S++ G P + + ++ S + A+AL
Sbjct: 349 IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFK 408
Query: 609 AM---AYAPFHITERQWTE-LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 664
M +P IT + LF + +++ + + +++ +S + L
Sbjct: 409 EMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSI-------TKSGTQLELSTYNIIL 461
Query: 665 HALCRS 670
H LC++
Sbjct: 462 HGLCKN 467
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 147/368 (39%), Gaps = 53/368 (14%)
Query: 255 LEDCNLY-----------PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR 303
LE+C+++ P + ++ L +G+L+E + +M KR +
Sbjct: 43 LEECDVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKM-----KRFR---- 93
Query: 304 KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCL 363
+ P N +L+ + GV FK + +G KP+ TY
Sbjct: 94 ------VFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTY----------- 136
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
+++ W+EG I A M+ RG++ Y + GR D + E++K
Sbjct: 137 -NIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMK 195
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMF 482
S+ +P IT+ LI G + + ++ MK +PN+ + + ++ + + DM
Sbjct: 196 SMS-CEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMM 254
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
+A + + + R P+E+TY+S+++A+ + M
Sbjct: 255 QQAIKFYVDMRRVGHV-------------PNEFTYTSLVDANCKIGNLSDAFRLANEMLE 301
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
G + + + L+ A + E F ++ AG IP+ + ++ + N ++
Sbjct: 302 VGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDR 361
Query: 603 AVALINAM 610
A+ L+N +
Sbjct: 362 ALELLNEL 369
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 138/346 (39%), Gaps = 47/346 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++ + K G A +F M + L PD Y+S+ G+VG L + V E
Sbjct: 134 FTYNIMIDCMWKEGDIEAARGLFEEM-KFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFE 192
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M+ EPD++ YN+++N S + ++++++SGLKP+
Sbjct: 193 EMKSMSC---------------EPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPN 237
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
+Y LV AF +E + +A+ +M + G V Y L C
Sbjct: 238 VVSY------------STLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCK 285
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
G DA + ++ + + +T+T LI D + + +F M PN+
Sbjct: 286 IGNLSDAFRLANEMLEVGVEWNV-VTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLA 344
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
+ NA++ + + +A EL E L G G ++PD Y + +
Sbjct: 345 SYNALIHGFVKAKNMDRALELLNE-----------LKGRG--IQPDLLLYGTFIWGLCGL 391
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK----CHLLE 569
+ E + V M +G + + + L+ ++G HLLE
Sbjct: 392 EKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLE 437
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 92/443 (20%), Positives = 170/443 (38%), Gaps = 52/443 (11%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L++ + K +F R M QSGL L+ + +QA + + ++
Sbjct: 209 LINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQA---IKFYVDMR 265
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ + F YT L+ K G +A R+ N MLE + ++ Y ++ L +
Sbjct: 266 RVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLE-VGVEWNVVTYTALIDGLCDAERM 324
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
KE KL +M + P+L YNA+++ V + + +L
Sbjct: 325 KEAEKLFGKMVTAG---------------VIPNLASYNALIHGFVKAKNMDRALELLNEL 369
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
+ G++P YG + + C L+ KI A + M++ G+ +Y
Sbjct: 370 KGRGIQPDLLLYGTFI--WGLCGLE----------KIEAAKVVMNEMQENGIKANTLIYT 417
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 460
L +G + + ++E+++ L H + +TF LI + I F M +
Sbjct: 418 TLMDAYFKSGNPTEGLHLLEEMQELDHEVTV-VTFCVLIDGLCKNKLVSKAIDYFGRMSN 476
Query: 461 H--CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
+PN AM+ + + A LFE+ + L PD Y+
Sbjct: 477 DFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEG-------------LVPDRTAYT 523
Query: 519 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 578
S+++ + + MA G +LD + L+ S +C+ L+ A L E
Sbjct: 524 SLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFS---QCNQLQKARSFLEEM 580
Query: 579 GEIPHPLFFTEMLIQAIVQSNYE 601
I + E+L +++ +YE
Sbjct: 581 --IGEEILPDEVLCIGVLKKHYE 601
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 34/236 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV---GLLKELVK 285
+YT L+ K+G P E L + M E H V V V GL K K
Sbjct: 414 LIYTTLMDAYFKSGNPTEGLHLLEEMQE---------LDHEVTVVTFCVLIDGLCKN--K 462
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
L+ SK I R + D L+P+ VY A+++ +Q K +F+Q+ + GL
Sbjct: 463 LV-------SKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGL 515
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
P Y M+ + +G + EA+A M + G+ Y L
Sbjct: 516 VPDRTAYTSLMDGNLK------------QGNMLEALALRDKMAEIGMKLDLLAYTSLVWG 563
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 461
+ Q A +E++ P E+ G++ + G ID+ + + ++ H
Sbjct: 564 FSQCNQLQKARSFLEEMIG-EEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKH 618
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 105/511 (20%), Positives = 194/511 (37%), Gaps = 93/511 (18%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + + + + +K + M GL L++ L G QA SV +
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ + ++ L KAGR A+RIF M E L P+ Y ++ L + +
Sbjct: 122 CVPDV---VTLSTMIDGLSKAGRIGAAVRIFKSM-EARGLAPNEVVYSALIHGLCKARKM 177
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
++++ +M++ PD + YN +++ S + F ++
Sbjct: 178 DCALEMLAQMKK---------------AFCTPDTITYNVLIDGLCKSGDVEAARAFFDEM 222
Query: 341 RKSGLKPSAATYGLAMESYRR-------------------CLLKV-----LVRAFWEEGK 376
++G KP TY + + + + C + + +V + K
Sbjct: 223 LEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKK 282
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI-------------- 422
I EAVA + + G T + Y L LC GR ++A+ ++ KI
Sbjct: 283 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 342
Query: 423 --------------------KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH- 461
+LR + +T LI + G I S+++ M H
Sbjct: 343 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 402
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
C P++ T++ M+ D SKA R ++ F S + L P+E YS+++
Sbjct: 403 CVPDVVTLSTMI------DGLSKAG-------RIGAAVRIFKSMEARGLAPNEVVYSALI 449
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
A + + + M + C D + L+ ++G FD +LEAG
Sbjct: 450 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 509
Query: 582 PHPLFFTEMLIQAIVQS-NYEKAVALINAMA 611
P ++ +LI ++ N + A + + M+
Sbjct: 510 PD-VYTYNILISGFCKAGNTDAACGVFDDMS 539
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 127/327 (38%), Gaps = 43/327 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT ++ L K + EA+ + + + P IA Y+++ L ++G L+E + L+
Sbjct: 270 YTAIVDWLAKNKKIEEAVALMEKITAN-GCTPTIATYNALLNGLCKMGRLEEAIDLL--- 325
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
RK D PD+V Y ++++ + + +FK++ GL
Sbjct: 326 ------------RKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTV 373
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
Y L+R + GKI +A + + M G V + L G
Sbjct: 374 CY------------TALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 421
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTV 469
R A+ + + +++ R P E+ ++ LI +D + + MK C P+ T
Sbjct: 422 RIGAAVRIFKSMEA-RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 480
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
N ++ ++ A+ F+E A KPD YTY+ ++ A
Sbjct: 481 NILIDGLCKSGDVEAARAFFDEMLEAGC-------------KPDVYTYNILISGFCKAGN 527
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ V+ M+ S C + + L+
Sbjct: 528 TDAACGVFDDMSSSRCSANVVTYGALI 554
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 99/265 (37%), Gaps = 45/265 (16%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY------------------- 352
P + YNA+LN + + + +++ +G P TY
Sbjct: 19 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 78
Query: 353 -------GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
GLA+++ L+R + GKI +A + + M G V +
Sbjct: 79 FKEMALRGLALDTV---CYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 135
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 464
L GR A+ + + +++ R P E+ ++ LI +D + + MK C P
Sbjct: 136 LSKAGRIGAAVRIFKSMEA-RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 194
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
+ T N ++ ++ A+ F+E A KPD YTY+ ++
Sbjct: 195 DTITYNVLIDGLCKSGDVEAARAFFDEMLEAGC-------------KPDVYTYNILISGF 241
Query: 525 ATAHQWEYFEY-VYKGMALSGCQLD 548
A + + + + ++GC +D
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTID 266
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 108/265 (40%), Gaps = 28/265 (10%)
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+ +++ +G P+ ATY L+ + G++ EA+ +R + G
Sbjct: 8 LMEKITANGCTPTIATY------------NALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 55
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
Y L L R +A + +++ +LR + +T LI + G I S++
Sbjct: 56 VVTYTSLIDGLGKEKRSFEAYKLFKEM-ALRGLALDTVCYTALIRELLQTGKIPQASSVY 114
Query: 456 QHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 514
+ M H C P++ T++ M+ D SKA R ++ F S + L P+E
Sbjct: 115 KTMTSHGCVPDVVTLSTMI------DGLSKAG-------RIGAAVRIFKSMEARGLAPNE 161
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 574
YS+++ A + + + M + C D + L+ ++G FD
Sbjct: 162 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDE 221
Query: 575 LLEAGEIPHPLFFTEMLIQAIVQSN 599
+LEAG P ++ +LI ++
Sbjct: 222 MLEAGCKPD-VYTYNILISGFCKAG 245
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 98/263 (37%), Gaps = 31/263 (11%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + + + + +K + M GL L++ L G QA SV +
Sbjct: 343 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 402
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ + ++ L KAGR A+RIF M E L P+ Y ++ L + +
Sbjct: 403 CVPDV---VTLSTMIDGLSKAGRIGAAVRIFKSM-EARGLAPNEVVYSALIHGLCKARKM 458
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
++++ +M++ PD + YN +++ S + F ++
Sbjct: 459 DCALEMLAQMKK---------------AFCTPDTITYNILIDGLCKSGDVEAARAFFDEM 503
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
++G KP TY +L+ F + G + A +M Y
Sbjct: 504 LEAGCKPDVYTY------------NILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYG 551
Query: 401 ELACCLCNNGRWQDAMLVVEKIK 423
L LC + A L + +K
Sbjct: 552 ALISGLCKRRQLTKASLYFQHMK 574
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 108/258 (41%), Gaps = 19/258 (7%)
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
+ ++A+ ++EKI + P T+ L+ G +++ I + + + D+ C P++ T
Sbjct: 1 KIEEAVALMEKITA-NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 59
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
+++ + +A +LF+E L G L D Y++++ +
Sbjct: 60 TSLIDGLGKEKRSFEAYKLFKEMA---------LRG----LALDTVCYTALIRELLQTGK 106
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
VYK M GC D + ++ S+AG+ F S+ G P+ + ++
Sbjct: 107 IPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSA 166
Query: 590 MLIQAIVQSNYEKAVALINAMAYA---PFHITERQWTE-LFESNEDRISRDKLEKLLNAL 645
++ + A+ ++ M A P IT + L +S + +R +++L A
Sbjct: 167 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAG 226
Query: 646 CNCNAASSEITVSNLSRA 663
C + + I +S +A
Sbjct: 227 CKPDVYTYNILISGFCKA 244
>gi|297725689|ref|NP_001175208.1| Os07g0491500 [Oryza sativa Japonica Group]
gi|255677777|dbj|BAH93936.1| Os07g0491500, partial [Oryza sativa Japonica Group]
Length = 654
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 168/404 (41%), Gaps = 75/404 (18%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
SR +Y LL L AG A+ +F+ M + + PD+ +Y+ + + G + +
Sbjct: 217 SRLIYNCLLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMAR 276
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV----FKQLRK 342
+ M+++ L PD V Y ++ H +G F V F+++ +
Sbjct: 277 LSEMQEQAK--------------LTPDKVTYLTLMQC----HYSEGTFPVCIGLFQEMEE 318
Query: 343 SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
G+ + + ++ A ++GK E +A M +RG A++Y L
Sbjct: 319 RGMGNDIPQHAYVL----------VIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTAL 368
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-- 460
+ GR ++AM + E++K +GL + S+ G I +C+ F + +
Sbjct: 369 IDSMGKFGREKEAMALFERMKD-----------SGLKLDSVTYGVIVNCLCRFGKLDEAV 417
Query: 461 ----HCEPNIGTVNAMLKV-----YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 511
C+ VNA+ + + M ++KELFEE + G+
Sbjct: 418 ACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMI---AKGFV---------- 464
Query: 512 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW-LLVEASRAGKCHLLEH 570
PD Y Y+ +++ A + + + +YK M GC DQT + + +L++ K H E
Sbjct: 465 PDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGC--DQTVYTYTILIDG--LFKEHKNEE 520
Query: 571 AF---DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
A D++++ G P F + + + +A +++ +A
Sbjct: 521 ALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRACRILDELA 564
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 101/267 (37%), Gaps = 37/267 (13%)
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+ W +K +R +G++PS Y CLL LV A G ++ AV M
Sbjct: 202 LLWAWKAMRLAGVEPSRLIY--------NCLLDGLVNA----GLLDTAVNVFDAMSTEDQ 249
Query: 393 VGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
V V Y + C GR DAM + +++ P ++T+ L+ G C
Sbjct: 250 VRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPVC 309
Query: 452 ISIFQHMKDHCEPN-------IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
I +FQ M++ N + + A+ K + + + + + AN++ YT L
Sbjct: 310 IGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTAL- 368
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
SM + FE M SG +LD + ++ R GK
Sbjct: 369 ------------IDSMGKFGREKEAMALFER----MKDSGLKLDSVTYGVIVNCLCRFGK 412
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEML 591
F S E G + +F+T ++
Sbjct: 413 LDEAVACFRSCQEKGIAVNAIFYTSLI 439
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 96/481 (19%), Positives = 187/481 (38%), Gaps = 78/481 (16%)
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLK-LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF 229
TA+N+ F G++ E + L++ G +++++ V +K S
Sbjct: 129 TARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTI---MKSHGVSPSVV 185
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+ LL IL K GR + A ++++ ML + PD ++ + G++ + ++
Sbjct: 186 TFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFND 245
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG--LKP 347
+ + EPD+V YN +++ + + + V K + K L P
Sbjct: 246 LSRFGC---------------EPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNP 290
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ TY L+R + + +I +A+A M +G+ Y L LC
Sbjct: 291 NVVTY------------TTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLC 338
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI 466
+++ ++E P TF L+ G++DD + +F+ M + +P+
Sbjct: 339 EARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDS 398
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T +A+++ + + KA++L ++ LSGDG KP Y+ +
Sbjct: 399 ATYSALVRSLCQGGHYEKAEDLLDKLLERK----ILLSGDGC--KPLVAAYNPI------ 446
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
F+Y+ C+ +TK A E AF L+ G P +
Sbjct: 447 ------FKYL--------CETGKTKKA---------------EKAFRQLMRRGTQDPPSY 477
Query: 587 FTEML---IQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLN 643
T ++ + +S YE V ++ F E L ++ ++ LEK+L
Sbjct: 478 KTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLR 537
Query: 644 A 644
+
Sbjct: 538 S 538
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 108/266 (40%), Gaps = 45/266 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y L+ L KAGR EA ++ M PD+ AY S L + G + +++E
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKAS-GCAPDVVAYSSFVYGLCKSGKVLNAHQVLE 246
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS---GL 345
+MR D +P++V YN +L+ S + + +Q+ S GL
Sbjct: 247 QMR---------------DSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL 291
Query: 346 KP---SAATYGLA-----------MESYRR--CLLKV-----LVRAFWEEGKINEAVAAV 384
S GL ME+ R C V LV + GKI EAV AV
Sbjct: 292 NVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAV 351
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR----HSKPLEITFTGLII 440
R M G A Y L LC+ GR +A +VE++ S H P T+ LI
Sbjct: 352 REMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIG 411
Query: 441 SSMDGGHIDDCISIFQHMKDH-CEPN 465
G IDD + FQ M+ C+P+
Sbjct: 412 GLCKAGRIDDALKFFQRMRSQGCDPD 437
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 159/391 (40%), Gaps = 59/391 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ L+ K GRP + R+ M + P++ +Y+ GLL+ L KL E
Sbjct: 11 VTFNALVNGFSKQGRPGDCERLLETMAAR-GIQPNVVSYN---------GLLEGLCKL-E 59
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
R + + +++M + PDLV Y+ +L+ + + + + K++ GL+P
Sbjct: 60 RWHEA-EELVRDMISRGGRST--PDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPD 116
Query: 349 AATYGLAMESYRR------------------CL-----LKVLVRAFWEEGKINEAVAAVR 385
A Y M S + C L+ E + A + ++
Sbjct: 117 ALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQ 176
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M GV Y L LC GR Q+A ++E++K+ P + ++ +
Sbjct: 177 TMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKA-SGCAPDVVAYSSFVYGLCKS 235
Query: 446 GHIDDCISIFQHMKD--HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
G + + + + M+D H +PN+ T N +L ++ A E+ E+ ++ G +
Sbjct: 236 GKVLNAHQVLEQMRDSDH-DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV 294
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
YS++++ + + V + MA +GC+ D ++ L+ +AG
Sbjct: 295 G------------YSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAG 342
Query: 564 KCHLLEHAFDSLLEA---GEIPHPLFFTEML 591
K +E A +++ E G P+ + + ++
Sbjct: 343 K---IEEAVEAVREMAMEGCKPNAVTYCSLV 370
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 144/372 (38%), Gaps = 72/372 (19%)
Query: 229 FVYTKLLAILGKAGRPHE---------------ALRIFNLMLEDC--------------- 258
+YTK++A L K+ R E L FN ++ C
Sbjct: 118 LMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQT 177
Query: 259 ----NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ D+ Y+++ L + G L+E +L+ERM+ PD+
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCA---------------PDV 222
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V Y++ + S + V +Q+R S P+ TY ++ +
Sbjct: 223 VAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTY------------NTILDGLCKS 270
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
GKI+ A+ + M G V Y LC GR Q+A V+E + + +P +
Sbjct: 271 GKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAM-ARAGCRPDVV 329
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T++ L+ G I++ + + M + C+PN T +++ ++A+ + EE
Sbjct: 330 TYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
+ G D P P TY++++ A + + ++ M GC D +
Sbjct: 390 SSGGGGG------DHCP--PSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSY 441
Query: 553 AWLLVEASRAGK 564
+ ++ +R+G+
Sbjct: 442 STIVEGLARSGR 453
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 95/244 (38%), Gaps = 15/244 (6%)
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P +TF L+ G DC + + M +PN+ + N +L+ + + + +A+EL
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+ + G PD TYS++L A + E + K + G + D
Sbjct: 68 VRD-----------MISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPD 116
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+ ++ ++ + + ++ AG P + F ++ + N E A +L+
Sbjct: 117 ALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQ 176
Query: 609 AMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALC 668
MA + + L + + E+LL + A+ V S ++ LC
Sbjct: 177 TMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM---KASGCAPDVVAYSSFVYGLC 233
Query: 669 RSEK 672
+S K
Sbjct: 234 KSGK 237
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 126/303 (41%), Gaps = 29/303 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P+ V +NA++N + + + + G++P+ +Y +E C L+
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGL--CKLE-----R 60
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASV--YYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
W +EA VR+M RG T + Y L C G+ +++ +++++ S R +
Sbjct: 61 W-----HEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVIS-RGLR 114
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P + +T ++ S + + + + + M + C P + T N ++ R A L
Sbjct: 115 PDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSL 174
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+ T A S +K D TY+++++ A + + E + + M SGC D
Sbjct: 175 LQ--TMAASG-----------VKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPD 221
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
++ + ++GK + + ++ P+ + + +L + A+ ++
Sbjct: 222 VVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMME 281
Query: 609 AMA 611
MA
Sbjct: 282 QMA 284
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 129/319 (40%), Gaps = 48/319 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+T ++ + G+ +F+ M+ + L P+I +Y+++ G+ KE + +
Sbjct: 314 TFTSIIHLYSVNGQIENCRAVFSTMVAE-GLKPNIVSYNTLMGAYASHGMNKEALSVFNA 372
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
++ + L PD+V Y ++LN+ S Q K VF+ +++ LKP+
Sbjct: 373 IK---------------NSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNI 417
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACCLC 407
+Y ++ A+ G + EAV +R MEQ G+ A L AC C
Sbjct: 418 VSYN------------AMIDAYGSNGLLAEAVEVLREMEQDGIYPNAVSICTLLAACGRC 465
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
+ D VV + RH K I + I S M+ G + S+++ M K P+
Sbjct: 466 SRKVNID---VVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVIPDA 522
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEE--------TTRANSSGYT------FLSGDGAPLKP 512
T ++ + + +A E E T A SSG F A P
Sbjct: 523 VTFTVLISGCCKMTKYCEALEFLSEMMDLKIPMTKEAYSSGKITEAESMFNKMKMAGCSP 582
Query: 513 DEYTYSSMLEASATAHQWE 531
D TY+ ML A A W+
Sbjct: 583 DVVTYTMMLHAYNAAEHWK 601
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 147/337 (43%), Gaps = 47/337 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLM 254
L+K + KGS ++ V W +K++R+ +R +Y ++ + + +A +F
Sbjct: 105 LIKEITQKGSIEHSILVFRW---MKNQRNYCARTDIYNMMIRLHARHNWTDQARGLF-FE 160
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
++ PD +++ G+ G + + ++E M QK + P
Sbjct: 161 MQKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQK---------------AIPPSR 205
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
YN ++NAC S W+ + K++ ++G+ P T+ + + +Y+
Sbjct: 206 STYNNLINACGSSGNWREALKLCKKMTENGVGPDLVTHNIILSAYK------------TG 253
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR-HSKPLEI 433
+ +A++ M+ + + + CL G+++ A+ + + ++ R P +
Sbjct: 254 AQYAKALSYFELMKGTNIRPDTTTLNIIIYCLTKLGQYEKAIGIFKSMREKRAECHPDVV 313
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
TFT +I G I++C ++F M + +PNI + N ++ Y+ + M +A +F
Sbjct: 314 TFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAI 373
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
+SG L+PD +Y+S+L + + Q
Sbjct: 374 ---KNSG----------LRPDVVSYTSLLNSYGRSQQ 397
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 161/407 (39%), Gaps = 61/407 (14%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTK-L 234
+F+R M + +G + L+ GL +G A+ + W L+ + + V T L
Sbjct: 442 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL--WFRLLE--KGFGANLVTTNAL 497
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L K G EA+R+ MLE D Y+++ + G ++E KL M ++
Sbjct: 498 IHGLCKTGNMQEAVRLLKKMLER-GFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 556
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+EPD YN +++ + ++ + + L P+ TYG+
Sbjct: 557 ---------------IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 601
Query: 355 AMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
++ Y + + L+RA+ G EA +M +G
Sbjct: 602 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 661
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
+ T + Y L +CN GR +DA ++++++ P + +T LI G +D
Sbjct: 662 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRK-EGLLPNVVCYTALIGGYCKLGQMDKV 720
Query: 452 ISIFQHMKDH-CEPNIGTVNAMLKVYSRN-DMFSKAKELFEETTRANSSGYTFLSGDGAP 509
+++ Q M + PN T M+ YS++ DM + AK L E G
Sbjct: 721 VNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV--------------GKG 766
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ PD TY+ + + E + M+ G LD+ + L+
Sbjct: 767 IVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLV 813
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 62/374 (16%), Positives = 142/374 (37%), Gaps = 54/374 (14%)
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
WV+ + ++++ + K G+ +A+++F +E + P++ Y+++ L
Sbjct: 233 WVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLF-FDMEKLGVSPNVVTYNNLIHGL 291
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G L E + E+M + + L+ Y+ ++N + ++
Sbjct: 292 CKHGNLDEAFRFKEKMVKDG---------------VNATLITYSVLINGLMKLEKFNEAN 336
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRR-----------------------CLLKVLVRAF 371
V K+ + G P+ Y ++ Y + L +++ F
Sbjct: 337 SVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGF 396
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ G++ +A + M RG + + LC N R++ A+ + ++ LR+ +P
Sbjct: 397 CKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML-LRNMRPN 455
Query: 432 EITFTGLIISSMDGGHIDDCISI-FQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ T L+ G D + + F+ ++ N+ T NA++ + +A L +
Sbjct: 456 DGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLK 515
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ G+ D+ TY++++ + E + M G + D
Sbjct: 516 KMLE---RGFVL----------DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 562
Query: 551 KHAWLLVEASRAGK 564
+ L+ R GK
Sbjct: 563 TYNLLIHGMCRIGK 576
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P + +L++ V +++ + +WVF+ +R+ G+ P + A + AF
Sbjct: 210 PTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTA------------INAF 256
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ GK+ +A+ +ME+ GV Y L LC +G +A EK+ + L
Sbjct: 257 CKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATL 316
Query: 432 EITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYS-----------RN 479
IT++ LI M ++ S+ + ++ PN N ++ Y R
Sbjct: 317 -ITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 375
Query: 480 DMFSKA 485
DM SK
Sbjct: 376 DMVSKG 381
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 143/338 (42%), Gaps = 51/338 (15%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R +A A L+ L + T+ V R M Q G + LLKGL D+
Sbjct: 119 KKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRS 178
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
++A+ +L + D D V YT ++ K G +A ++ ML D + P++
Sbjct: 179 QEALELLQMM--PDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML-DRGILPNVV 235
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQ---------------------KPSKRIKNMHRK 304
Y S+ L + + + ++++ M + +P + I + +
Sbjct: 236 TYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM 295
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY----- 359
+ D V EPD+V YN++++ + + +F + K GLKP TYG ++ Y
Sbjct: 296 HSDGV-EPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 360 ------------------RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
+ +L+ A+ ++GK+++A+ M Q+G+ Y
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
+ LC +GR +DAM E++ R S P I + LI
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLS-PGNIVYNSLI 451
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/283 (17%), Positives = 107/283 (37%), Gaps = 29/283 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG--LKPSAATYGLAMESYRRCLLKVLVR 369
P++ YN +L ++ + + + + G P +Y ++
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSY------------TTVIN 207
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
F++EG +++A M RG++ Y + LC AM V+ +
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVK-NGVM 266
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+ ++ G + I + M D EP++ T N+++ +N ++A+++
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKM 326
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F+ T+ LKP+ TY ++L+ AT + M +G +
Sbjct: 327 FDSMTKRG-------------LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ ++ GK F + + G P + + ++
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVI 416
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/374 (17%), Positives = 144/374 (38%), Gaps = 40/374 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T LL L R +A+ I + P++ +Y+ LLK L E
Sbjct: 129 FTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNI---------LLKGLCD--ENR 177
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q+ + ++ M D PD+V Y V+N + + ++ G+ P+
Sbjct: 178 SQEALELLQMMPDDGGD--CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVV 235
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY ++ A + +++A+ + +M + GV+ Y + C++G
Sbjct: 236 TY------------SSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
+ ++A+ ++K+ S +P +T+ L+ G + +F M K +P I T
Sbjct: 284 QPKEAIGFLKKMHS-DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTY 342
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
+L+ Y+ + L + R + P+ Y +S ++ A A +
Sbjct: 343 GTLLQGYATKGALVEMHGLLDLMVRNG-------------IHPNHYVFSILICAYAKQGK 389
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
+ V+ M G D + ++ ++G+ F+ +++ P + +
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449
Query: 590 MLIQAIVQSNYEKA 603
++ + ++KA
Sbjct: 450 LIHSLCIFDKWDKA 463
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 158/422 (37%), Gaps = 57/422 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ K+G EALR+ L+ ++ P+ A Y +V +L G LK+ +++++R
Sbjct: 142 YNVLINAYCKSGEIEEALRV----LDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q PD+V +++A +F ++R G KP
Sbjct: 198 LQSKC---------------YPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVV 242
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY VL++ F +EG+++EA+ ++ + G + + LC+ G
Sbjct: 243 TY------------NVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGG 290
Query: 411 RWQDAMLVVEKIKSLRHSK-PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGT 468
RW DAM ++ + LR P +TF LI G + +++ + M H PN +
Sbjct: 291 RWMDAMKLLATM--LRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRS 348
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSG--------YTFLSGDG------------- 507
N +++ + +A E E T L DG
Sbjct: 349 FNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLS 408
Query: 508 -APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
P +Y+++++ + E + + M G + D ++ SR GK H
Sbjct: 409 SKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVH 468
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 626
F L G P+ + +++ A+ + M TE +T L
Sbjct: 469 EAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLI 528
Query: 627 ES 628
+
Sbjct: 529 KG 530
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/409 (19%), Positives = 163/409 (39%), Gaps = 69/409 (16%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR-----FVYT 232
+R+++ + + +L L D+G +QAM VLD R L+S+ T
Sbjct: 159 LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLD--------RQLQSKCYPDVVTCT 210
Query: 233 KLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
L+ K +A+++FN M + C PD+ Y+ + + G L E + ++++
Sbjct: 211 VLIDATCKESGVGQAMKLFNEMRGKGCK--PDVVTYNVLIKGFCKEGRLDEAIIFLKKL- 267
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
PS ++ D++ +N +L + +W + + + G PS T
Sbjct: 268 --PSYGCQS------------DVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVT 313
Query: 352 YGLAMESY-RRCLL----------------------KVLVRAFWEEGKINEAVAAVRNME 388
+ + + ++ LL L++ F I+ A+ + M
Sbjct: 314 FNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMV 373
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
RG Y L LC +G+ DA++++ ++ S + P I++ +I + G
Sbjct: 374 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSS-KGCSPSLISYNTVIDGLLKVGKA 432
Query: 449 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
+ + + + M +P++ T +++ SR +A + F +L G G
Sbjct: 433 ELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFH-----------YLKGFG 481
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+KP+ + Y+S++ A Q M +GC+ + + L+
Sbjct: 482 --IKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLI 528
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 122/311 (39%), Gaps = 23/311 (7%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L+R F + G+ A + +E+ G V A+ Y L C +G ++A+ V++
Sbjct: 110 LIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTSV-- 167
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKA 485
P T+ ++ S D G + + + + ++ C P++ T ++ + +A
Sbjct: 168 --APNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQA 225
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+LF E + G G KPD TY+ +++ + + K + GC
Sbjct: 226 MKLFNE-----------MRGKGC--KPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGC 272
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAV 604
Q D H +L G+ ++L G P + F +LI + Q KA+
Sbjct: 273 QSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTF-NILINFLCQKGLLGKAL 331
Query: 605 ALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 664
++ M R + L + +R D+ + L + + +I N+ L
Sbjct: 332 NVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVS-RGCYPDIVTYNI--LL 388
Query: 665 HALCRSEKERD 675
ALC+ K D
Sbjct: 389 TALCKDGKVDD 399
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 132/328 (40%), Gaps = 43/328 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VYT L+ K G A ++F+ M E + PD AY +V L + G + E K+ +
Sbjct: 82 VYTTLIDGFCKLGNIQAAYKLFDEM-EKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNK 140
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + +EPD V Y +++ S + + F + Q+ +SGL P+
Sbjct: 141 MFSRG---------------VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNV 185
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L + G+++ A + M +G+ Y L LC +
Sbjct: 186 VTY------------TALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKS 233
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 468
G + A+ ++E+++ + P ITFT L+ + G + + + M D +P + T
Sbjct: 234 GNIRQAVKLMEEME-VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVIT 292
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
N ++ + + M + L + G + P+ TY+S+++ +
Sbjct: 293 FNVLMNGFCMSGMLEDGERLL---------AWMLEKG----IMPNTTTYNSLMKQYCIRN 339
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+YKGM G D + L+
Sbjct: 340 NMRCTTEIYKGMCARGVMPDSNTYNILI 367
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 141/373 (37%), Gaps = 51/373 (13%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ +Y +V G L++++KLI+ M+ K L+P+L YN+++
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKG---------------LKPNLYTYNSII 52
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
S + V +++ G+ P Y L+ F + G I A
Sbjct: 53 LLLCKSGKVDDAERVLREMINQGIVPDTVVY------------TTLIDGFCKLGNIQAAY 100
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
ME++ +V Y + C LC G+ +A V K+ S R +P E+T+T LI
Sbjct: 101 KLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFS-RGVEPDEVTYTTLIDG 159
Query: 442 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT----RAN 496
G ++ S+ M + PN+ T A+ + A EL E + N
Sbjct: 160 YCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLN 219
Query: 497 SSGYTFL------SGD------------GAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
Y L SG+ A + PD T++++++A + + +
Sbjct: 220 ICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLR 279
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
M G Q L+ +G E +LE G +P+ + ++ Q +++
Sbjct: 280 EMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRN 339
Query: 599 NYEKAVALINAMA 611
N + M
Sbjct: 340 NMRCTTEIYKGMC 352
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 139/359 (38%), Gaps = 48/359 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G+ + A + D ++ +R + YT ++ L + G+ EA ++FN M
Sbjct: 86 LIDGFCKLGNIQAAYKLFDE---MEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMF 142
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD Y ++ + G +++ L +M Q L P++V
Sbjct: 143 SR-GVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG---------------LTPNVV 186
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y A+ + Q + ++ GL+ + TY LV + G
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTY------------NSLVNGLCKSG 234
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
I +AV + ME G+ + L C G A ++ ++ R +P ITF
Sbjct: 235 NIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLD-RGLQPTVITF 293
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYS-RNDMFSKAKELFEETT 493
L+ G ++D + M + PN T N+++K Y RN+M
Sbjct: 294 NVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNM------------ 341
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
R + Y + G + PD TY+ +++ A + +++K MA G L + +
Sbjct: 342 RCTTEIYKGMCARG--VMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSY 398
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 155/373 (41%), Gaps = 46/373 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV--KLI 287
V+ ++ + ++GR +A ++ + M D ++ PD+ +++++ + G L V +L+
Sbjct: 63 VFNAMMGVYARSGRFDDARQLLDAM-RDQDIEPDLVSFNTLINARAKSGCLAAGVALELL 121
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+RQ L PD + YN +++AC VF+++ S +P
Sbjct: 122 HEVRQAG---------------LRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRP 166
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
TY + + RC GK EA + + ++G A Y L
Sbjct: 167 DLWTYNAMVSVHGRC------------GKAQEAELMFKELVEKGFQPDAVTYNSLLYAFA 214
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI 466
G + V E++ K IT+ +I G +D + ++ M+ C P+
Sbjct: 215 KEGDVERVERVCEELVKAGFRKD-GITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDA 273
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T ++ + D S+A ++ EE A LKP T+S+++ A A
Sbjct: 274 VTYTVLVDSLGKMDRISEAGKVLEEMADAG-------------LKPTLVTFSALICAYAK 320
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
+ + + E + M SG + D+ + +L +R+ + L + ++++ G P
Sbjct: 321 SGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGL 380
Query: 587 FTEMLIQAIVQSN 599
+ ++L+ A+ + N
Sbjct: 381 Y-QVLLAALAKGN 392
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 137/319 (42%), Gaps = 29/319 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P + N ++ A + + ++ V ++L+ +K S +T L +E AF
Sbjct: 655 PTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLE------------AF 702
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ G + E + M+ G + +Y + LC+N R++D L+V +++ KP
Sbjct: 703 AKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGF-KPD 761
Query: 432 EITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ L++ G+ D I ++ ++ EP+ T N ++ +YSRN + +E
Sbjct: 762 LVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRN---FRPEE--- 815
Query: 491 ETTRANSSGYTFLSGDGA-PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
G+T L G L P +Y +L AS A WE + +++ M G +L++
Sbjct: 816 --------GFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNR 867
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
+ + ++ A EH ++ E G P ++ + ++A ++N+
Sbjct: 868 SIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNS 927
Query: 610 MAYAPFHITERQWTELFES 628
+ + I+ ++ + ++
Sbjct: 928 LKSSNLEISTLPYSTVLDA 946
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 142/359 (39%), Gaps = 47/359 (13%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P + ++++ + G + +L++ MR D +EPDLV +N ++
Sbjct: 59 PTVQVFNAMMGVYARSGRFDDARQLLDAMR---------------DQDIEPDLVSFNTLI 103
Query: 322 NACVPSHQWK-GV-FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
NA S GV + ++R++GL+P A TY L+ A + +++
Sbjct: 104 NARAKSGCLAAGVALELLHEVRQAGLRPDAITY------------NTLISACSQGSNLDD 151
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
AVA M Y + G+ Q+A L+ +++ + +P +T+ L+
Sbjct: 152 AVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVE-KGFQPDAVTYNSLL 210
Query: 440 ISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
+ G ++ + + + K + T N M+ +Y + A L++E +
Sbjct: 211 YAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCT 270
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
PD TY+ ++++ + V + MA +G + + L+
Sbjct: 271 -------------PDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICA 317
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAP 614
+++G+ E FD ++E+G P L + ML K + L AM Y P
Sbjct: 318 YAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKP 376
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 24/183 (13%)
Query: 457 HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL---------------FEETTRANSSGYT 501
H++ P + NAM+ VY+R+ F A++L F A +
Sbjct: 52 HLRFPHLPTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGC 111
Query: 502 FLSGDG---------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
+G A L+PD TY++++ A + + V++ M S C+ D +
Sbjct: 112 LAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTY 171
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 612
++ R GK E F L+E G P + + +L + + E+ + +
Sbjct: 172 NAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVK 231
Query: 613 APF 615
A F
Sbjct: 232 AGF 234
>gi|225438599|ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Vitis vinifera]
gi|296082481|emb|CBI21486.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 150/341 (43%), Gaps = 41/341 (12%)
Query: 156 EAIRVLVDRLS-EREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
E +RVL+ ER + + K+V+++ TE +L + LG W Q + V
Sbjct: 70 ELVRVLMKNFGGERPLISTLNKYVKVIR------TE-HCFRLFEELGKTDKWLQCLEVFR 122
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS-VAVT 273
W+ K + + VY+KL++++GK G+ A+ +F+ M + PD + Y++ +
Sbjct: 123 WMQ--KQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEM-RNSGCRPDTSVYNALITAH 179
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
L K L+K + ++K M R +P++V YN +L A +
Sbjct: 180 LHSRDKSKALIKALGYF-----DKMKGMER------CKPNIVTYNILLRAFAQAQNVNQA 228
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
+FK+L +S + P T+ M++Y + G I E + + M+
Sbjct: 229 NALFKELNESIVSPDIFTFNGVMDAYGK------------NGMIKEMESVLSRMKSNQCK 276
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDC 451
+ L + + GR Q+ + + KSL S KP TF +I + +
Sbjct: 277 PDIITFNVL---IDSYGRRQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLKEKA 333
Query: 452 ISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
++F+ M D PN T +++ +Y D S+A+E+F+E
Sbjct: 334 ENVFKKMTDMGYAPNFITYESLIMMYGFCDCISRAREIFDE 374
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 131/313 (41%), Gaps = 33/313 (10%)
Query: 369 RAFWEEGKIN---EAVAAVRNME-QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
R F E GK + + + R M+ QR + VY +L + G+ + AM + ++++
Sbjct: 103 RLFEELGKTDKWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRN 162
Query: 425 LRHSKPLEITFTGLIISSM----DGGHIDDCISIFQHMK--DHCEPNIGTVNAMLKVYSR 478
+P + LI + + + + F MK + C+PNI T N +L+ +++
Sbjct: 163 -SGCRPDTSVYNALITAHLHSRDKSKALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQ 221
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
++A LF+E + S PD +T++ +++A + E V
Sbjct: 222 AQNVNQANALFKELNESIVS-------------PDIFTFNGVMDAYGKNGMIKEMESVLS 268
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI---QAI 595
M + C+ D L+ R + +E F SLL + E P F M+ +A
Sbjct: 269 RMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKAR 328
Query: 596 VQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEI 655
++ E + M YAP IT ++ D ISR + ++ + + A+ E+
Sbjct: 329 LKEKAENVFKKMTDMGYAPNFITYESLIMMY-GFCDCISRAR--EIFDEMM---ASKKEM 382
Query: 656 TVSNLSRALHALC 668
VS L+ L C
Sbjct: 383 KVSTLNAMLEVYC 395
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 121/305 (39%), Gaps = 79/305 (25%)
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A+ D + G++ R + Y LL +A ++A +F + E + PDI +
Sbjct: 191 KALGYFDKMKGME--RCKPNIVTYNILLRAFAQAQNVNQANALFKELNESI-VSPDIFTF 247
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+ V G+ G++KE+ ++ RM+ K PD++ +N ++++
Sbjct: 248 NGVMDAYGKNGMIKEMESVLSRMKSNQCK---------------PDIITFNVLIDSYGRR 292
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
++ + VFK L +S KP+ T+ + +Y + LK
Sbjct: 293 QEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLK---------------------- 330
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+ A V +K+ + ++ P IT+ LI+ M G
Sbjct: 331 -------------------------EKAENVFKKMTDMGYA-PNFITYESLIM--MYG-- 360
Query: 448 IDDCIS----IF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR----ANSS 498
DCIS IF + M E + T+NAML+VY N + +A L E + SS
Sbjct: 361 FCDCISRAREIFDEMMASKKEMKVSTLNAMLEVYCMNGLPMEADLLLERARKNRPFPGSS 420
Query: 499 GYTFL 503
Y L
Sbjct: 421 TYKLL 425
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 140/348 (40%), Gaps = 47/348 (13%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ F Y ++ + K G A +F M + L PD Y+S+ G+VG L + V
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 319
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
E M+ D EPD++ YNA++N + +++++ +GLK
Sbjct: 320 FEEMK---------------DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P+ +Y LV AF +EG + +A+ +M + G+V Y L
Sbjct: 365 PNVVSY------------STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPN 465
C G DA + ++ + + +T+T LI D + + +F M PN
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNV-VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ + NA++ + + +A EL E L G G +KPD Y + +
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNE-----------LKGRG--IKPDLLLYGTFIWGLC 518
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK----CHLLE 569
+ + E + V M G + + + L+ ++G HLL+
Sbjct: 519 SLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 566
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 128/319 (40%), Gaps = 36/319 (11%)
Query: 322 NACVPSHQWKGVF-WVFKQLRKSGLKPSAATYGLAMESYR------RCLLKVLVRAFWEE 374
N CVP GVF +F L G+ A M+ +R C L+ F +
Sbjct: 186 NVCVPGF---GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSC--NGLLHRFAKL 240
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
GK ++ ++M G T Y + C+C G + A + E++K R P +T
Sbjct: 241 GKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMK-FRGLVPDTVT 299
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET- 492
+ +I G +DD + F+ MKD CEP++ T NA++ + + E + E
Sbjct: 300 YNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK 359
Query: 493 ---TRANSSGYTFL----SGDG--------------APLKPDEYTYSSMLEASATAHQWE 531
+ N Y+ L +G L P+EYTY+S+++A+
Sbjct: 360 GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 419
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ M G + + + L+ A + E F + AG IP+ + ++
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Query: 592 IQAIVQSNYEKAVALINAM 610
+ N ++A+ L+N +
Sbjct: 480 HGFVKAKNMDRALELLNEL 498
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 87/430 (20%), Positives = 168/430 (39%), Gaps = 56/430 (13%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
+F R M +GL L+ +G +QA+ + ++ + + + YT L+
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK---FYVDMRRVGLVPNEYTYTSLI 409
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
K G +A R+ N ML+ + ++ Y ++ L +KE +L +M
Sbjct: 410 DANCKIGNLSDAFRLGNEMLQ-VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG- 467
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ P+L YNA+++ V + + +L+ G+KP YG
Sbjct: 468 --------------VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+ + C L+ KI A + M++ G+ + +Y L +G +
Sbjct: 514 I--WGLCSLE----------KIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNAML 473
+ +++++K L + +TF LI + + F + + + N AM+
Sbjct: 562 LHLLDEMKELDIEVTV-VTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
+++ A LFE+ + L PD Y+S+++ +
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKG-------------LVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE--AGEIPHPLFFTEML 591
+ MA G +LD + L+ S C+ L+ A S LE GE HP E+L
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSH---CNQLQKA-RSFLEEMIGEGIHP---DEVL 720
Query: 592 IQAIVQSNYE 601
++++ +YE
Sbjct: 721 CISVLKKHYE 730
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 110/477 (23%), Positives = 181/477 (37%), Gaps = 73/477 (15%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
++ IM Q G E L+ GL + G +A+ + + + + YT L
Sbjct: 249 YEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFA---DMTEDNCCPTVRTYTVL 305
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L +GR EAL +FN M E P++ Y + L + + E K++ M +K
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEK-GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-- 352
L P +V YNA+++ F + + + P+ TY
Sbjct: 365 ---------------LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409
Query: 353 ---GL--------AMESYRRCLLKVLVRAFWE-------EGKINEAVAAVRN---MEQRG 391
GL AM + L + L + + K+N+ +A R M + G
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
+V Y LC GR ++A + + +K+ + K E+ +T LI G ID
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKA-KGVKANEVIYTALIDGYCKVGKIDVA 528
Query: 452 ISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFLSG- 505
S+ + M D C PN T N +++ + +A L + + YT L G
Sbjct: 529 YSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGE 588
Query: 506 ---DGA--------------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
DGA +PD TY++ L A + E + V M G D
Sbjct: 589 MLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPD 648
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFD---SLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
+ L+ +R G H AFD +++ G P L+ +LI+ + N K
Sbjct: 649 LVTYTVLIDGYARLGLTH---RAFDFLKCMVDTGCKPS-LYIVSILIKNLSHENRMK 701
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 160/401 (39%), Gaps = 48/401 (11%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
EK VL+D L + + K + M++ GL+ + L+ G +G
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
A +LD + + ++ Y +L+ L K + H+A+ + N MLE L P + Y
Sbjct: 387 DAFEILDLMESNSCGPNTRT---YNELICGLCKKRKVHKAMALLNKMLER-KLSPSLITY 442
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+S+ +V L+ +L+ M + L PD Y+ ++
Sbjct: 443 NSLIHGQCKVNDLESAYRLLSLMNENG---------------LVPDQWTYSVFIDTLCKE 487
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ + +F ++ G+K + Y L+ + + GKI+ A + + M
Sbjct: 488 GRVEEAGTLFDSVKAKGVKANEVIY------------TALIDGYCKVGKIDVAYSLLERM 535
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+ + Y L LC + ++A +V K+ ++ KP +T+T LI + G
Sbjct: 536 LNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG-VKPTVVTYTILIGEMLKDGA 594
Query: 448 IDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
D + +F HM +P++ T A L Y M + ++ + N G
Sbjct: 595 FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVI---AKMNEEG------- 644
Query: 507 GAPLKPDEYTYSSMLEASA-TAHQWEYFEYVYKGMALSGCQ 546
+ PD TY+ +++ A F+++ K M +GC+
Sbjct: 645 ---ILPDLVTYTVLIDGYARLGLTHRAFDFL-KCMVDTGCK 681
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 150/407 (36%), Gaps = 60/407 (14%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L +AGR +EAL++F M ED N P + Y + L G E + L M
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTED-NCCPTVRTYTVLIYALSGSGRKVEALNLFNEM 325
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++K EP++ Y +++ ++ + ++ + GL PS
Sbjct: 326 KEKGC---------------EPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVV 370
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY L+ + +EG I++A + ME Y EL C LC
Sbjct: 371 TY------------NALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKR 418
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
+ AM ++ K+ R P IT+ LI ++ + M ++ P+ T
Sbjct: 419 KVHKAMALLNKMLE-RKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTY 477
Query: 470 NAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFLSGDGA----------------- 508
+ + + +A LF+ +AN YT L DG
Sbjct: 478 SVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI-DGYCKVGKIDVAYSLLERML 536
Query: 509 --PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
P+ YTY+ ++E + + + M G + + L+ E + G
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGA-- 594
Query: 567 LLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+HA F+ ++ G P +T L Q E+ +I M
Sbjct: 595 -FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM 640
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 108/279 (38%), Gaps = 71/279 (25%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL + ++A S++ + + K + YT L+ + K G AL++FN M+
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVK---PTVVTYTILIGEMLKDGAFDHALKVFNHMV 606
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
PD+ Y + G+L+E+ +I +M N + +L PDLV
Sbjct: 607 -SLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM--------------NEEGIL-PDLV 650
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS--------------------------- 348
Y +++ F K + +G KPS
Sbjct: 651 TYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGID 710
Query: 349 ---------------AATYGLAMESYRR-----CLLKV-----LVRAFWEEGKINEAVAA 383
Y +A++ + + C + V L+ F ++ ++ EA
Sbjct: 711 SVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGL 770
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
V +M++RG+ + +Y L C C G + +A+ +V+ +
Sbjct: 771 VHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAM 809
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 137/337 (40%), Gaps = 47/337 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y +++ I GKAG P +A ++ M P+I + ++ + GL +E + ++
Sbjct: 211 TYNRMIVIYGKAGEPSKAEMLYRSM-RRAMCPPNICTFTALMNAFARQGLYREAERYFDK 269
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+++ K PD YNA++ A G +F+ ++++G P
Sbjct: 270 LQEFDYK---------------PDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDT 314
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
++ +L+ A+ G +A ++M+ G L
Sbjct: 315 VSH------------NILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARA 362
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM----KDHCEPN 465
GR ++A +V ++ +KP + + LI + G +D ++ M +P+
Sbjct: 363 GRVEEAEELVSAMER-DGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPD 421
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
IGT N +++VY++ +A+ELF+ R L PD T+++++ A
Sbjct: 422 IGTYNTLIQVYAQAGFIPRAEELFQGLARLK-------------LVPDATTWTALMGGYA 468
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
+ + K M SGC+ D A +L A R+
Sbjct: 469 KKKLYRKCTSILKKMLESGCRADAVT-ARVLFSACRS 504
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 127/337 (37%), Gaps = 60/337 (17%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLV 368
PDL YN +++A S + F +++++ P+ T+G+ + YR
Sbjct: 99 TFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLA------ 152
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
G +A M++RG Y CN + V+E K R +
Sbjct: 153 ------GSFEKAEELFVQMQKRG--------YSPGPLACNT-----FLHVLEDAKEYRRA 193
Query: 429 K------------PLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKV 475
+ P T+ +I+ G +++ M+ C PNI T A++
Sbjct: 194 EALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNA 253
Query: 476 YSRNDMFSKAKELFEETT----RANSSGYTFL----SGDGAPLK--------------PD 513
++R ++ +A+ F++ + + Y L S G+P PD
Sbjct: 254 FARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPD 313
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
+++ ++ A A +E E ++K M +G + + LL +RAG+ E
Sbjct: 314 TVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVS 373
Query: 574 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
++ G P L + ++ V +E AL+ M
Sbjct: 374 AMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKM 410
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 135/316 (42%), Gaps = 49/316 (15%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERM---RQKPSKR-----IKNMHRKN-------- 305
PD+ Y+ + G+ G + EL +L E+M KP+ I N+ + N
Sbjct: 823 PDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDL 882
Query: 306 -WDPV---LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
+D V P Y +L+ + S + + +F+++ G +P+ A Y
Sbjct: 883 FYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIY--------- 933
Query: 362 CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
+L+ F + G +N A + M + G+ Y L CLC GR DA+ EK
Sbjct: 934 ---NILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEK 990
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGH-IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 479
+K + L+ L+I + H I++ ++++ M+ P++ T N+++
Sbjct: 991 LK--QTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVA 1048
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
M +A +L+EE F+ L+P+ +TY++++ + + + VYK
Sbjct: 1049 GMVEQAGKLYEE--------LQFIG-----LEPNVFTYNALIRGYSMSGNSDSAYAVYKR 1095
Query: 540 MALSGCQLDQTKHAWL 555
M + GC + A L
Sbjct: 1096 MMVGGCSPNTGTFAQL 1111
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 132/339 (38%), Gaps = 47/339 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ YT + +LG+AGR EA RI M ED PD+ Y + L G L + ++L
Sbjct: 265 YTYTICIRVLGRAGRIDEACRIMKRM-EDDGCGPDVVTYTVLIDALCTAGKLDDAMELFV 323
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV--FWVFKQLRKSGLK 346
+M+ K PD V Y +L+ V FW ++ G
Sbjct: 324 KMKASSHK---------------PDRVTYITMLDKFSDCGDLGRVKEFW--SEMEADGYA 366
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P T+ +LV A + G I+EA + M ++GV+ Y L L
Sbjct: 367 PDVITF------------TILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGL 414
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 465
R DA+ + +++L P T+ I G D + F+ MK PN
Sbjct: 415 LRVNRLDDALDLFNNMETL-GVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPN 473
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
I NA L + +AK +F R S+G L PD TY+ M++ +
Sbjct: 474 IVACNASLYSLAEMGRLREAKVIFN---RLKSNG----------LAPDSVTYNMMMKCYS 520
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
A Q + + M+ + C+ D L+ +AG+
Sbjct: 521 KAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGR 559
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 134/329 (40%), Gaps = 46/329 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L G+ +A +LD ++ + L + Y L++ L + R +AL +FN M
Sbjct: 375 LVNALCKAGNIDEAFHLLDV---MRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNM- 430
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + P Y G+ G + ++ E+M+ + + P++V
Sbjct: 431 ETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRG---------------IAPNIV 475
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
NA L + + + +F +L+ +GL P + TY + M+ Y + G
Sbjct: 476 ACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSK------------AG 523
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+++EA+ + +M + V L L GR +A + ++K ++ + P +T+
Sbjct: 524 QVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLA-PTVVTY 582
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
LI G + + +F M + C PN T N +L +ND A ++ + T
Sbjct: 583 NTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTT 642
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
N PD T+++++
Sbjct: 643 MNC-------------MPDVLTFNTIIHG 658
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 121/319 (37%), Gaps = 68/319 (21%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK 281
KRDL + + K L I G + A F M E + + +Y+ + L Q GL +
Sbjct: 156 KRDLNTYLIIFKGLFIRGGLRQTPFA---FGKMRE-AGFHLNAYSYNGLIHLLLQSGLCR 211
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
E +++ RM + L+P L ++A++ A + V + +++
Sbjct: 212 EALEMYRRMVLEG---------------LKPSLKTFSALMVATGKRRDTETVKSLLEEME 256
Query: 342 KSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
GLKP+ TY + +R G+I+EA ++ ME G Y
Sbjct: 257 SLGLKPNIYTY------------TICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTV 304
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHS--------------------------------- 428
L LC G+ DAM + K+K+ H
Sbjct: 305 LIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADG 364
Query: 429 -KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
P ITFT L+ + G+ID+ + M K PN+ T N ++ R + A
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDAL 424
Query: 487 ELFE--ETTRANSSGYTFL 503
+LF ET + YT++
Sbjct: 425 DLFNNMETLGVVPTAYTYI 443
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 166/433 (38%), Gaps = 75/433 (17%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
V L+ L KAGR EA ++F L+D L P + Y+++ LG+ G ++ ++L
Sbjct: 545 IVINSLINTLYKAGRVDEAWKMF-CRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFA 603
Query: 289 RMRQK--PSKRI----------KN--------MHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M P I KN M K PD++ +N +++ V
Sbjct: 604 SMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEK 663
Query: 329 QWKGVFWVFKQLRK---------SGLKPSAATYGLAMESYRRC-----LLKVLV-RAFWE 373
+ W+F Q++K L P GL ++++ L V V R FWE
Sbjct: 664 RVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWE 723
Query: 374 E--GKINEAVAAVRNM--EQRGVVG----TASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+ G I + + R V G SV + LC + + A V +
Sbjct: 724 DLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKE 783
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCI-SIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFS 483
KP ++ +I G H D+ ++F MK+ C P++ T N +L + ++ +
Sbjct: 784 LGVKPTLESYN-FLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKIN 842
Query: 484 KAKELFEET-------------------TRANSSG------YTFLSGDGAPLKPDEYTYS 518
+ EL+E+ ++NS Y +SGD P TY
Sbjct: 843 ELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGD---FSPTPCTYG 899
Query: 519 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 578
+L+ + + E + +++ M GC+ + + L+ + G + F ++
Sbjct: 900 PLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVRE 959
Query: 579 GEIPHPLFFTEML 591
G P +T ++
Sbjct: 960 GIRPDLKSYTSLV 972
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/312 (17%), Positives = 122/312 (39%), Gaps = 61/312 (19%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++P L YN ++ + H + + +F +++ +G P TY L ++++ +
Sbjct: 786 VKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGK-------- 837
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
GKINE +Y ++ C C +++ +KS K
Sbjct: 838 ----SGKINELF---------------ELYEQMICSSCKPNTITHNIIIANLVKSNSLDK 878
Query: 430 PLEI--------------TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 474
L++ T+ L+ + G +++ +F+ M D+ C PN N ++
Sbjct: 879 ALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILIN 938
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
+ + + A ELF+ R ++PD +Y+S++ A + +
Sbjct: 939 GFGKTGDVNTACELFKRMVREG-------------IRPDLKSYTSLVGCLCEAGRVDDAL 985
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEML 591
+ ++ + +G LD + ++ G+ H +E A +D + G P + ++
Sbjct: 986 HYFEKLKQTGLYLDSIAYNLMI---DGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLI 1042
Query: 592 IQAIVQSNYEKA 603
+ V E+A
Sbjct: 1043 LNLGVAGMVEQA 1054
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 31/207 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G G A + + + DLKS YT L+ L +AGR +AL F L
Sbjct: 936 LINGFGKTGDVNTACELFKRMVREGIRPDLKS---YTSLVGCLCEAGRVDDALHYFE-KL 991
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ LY D AY+ + LG+ ++E + L + M+ + + PDL
Sbjct: 992 KQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRG---------------INPDLF 1036
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN+++ + + ++++L+ GL+P+ TY L+R + G
Sbjct: 1037 TYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTY------------NALIRGYSMSG 1084
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYEL 402
+ A A + M G + +L
Sbjct: 1085 NSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 130/333 (39%), Gaps = 55/333 (16%)
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ------WKGVF---------WVFKQLRK 342
I +HR+ D V VV+N + N + +KG+F + F ++R+
Sbjct: 133 ILRIHRRVGDMV-----VVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMRE 187
Query: 343 SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
+G +A +Y L+ + G EA+ R M G+ + + L
Sbjct: 188 AGFHLNAYSY------------NGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSAL 235
Query: 403 ACCLCNNGRWQDAMLV---VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
+ G+ +D V +E+++SL KP T+T I G ID+ I + M+
Sbjct: 236 ---MVATGKRRDTETVKSLLEEMESL-GLKPNIYTYTICIRVLGRAGRIDEACRIMKRME 291
Query: 460 DH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
D C P++ T ++ A ELF + +A+S KPD TY
Sbjct: 292 DDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKM-KASSH------------KPDRVTYI 338
Query: 519 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 578
+ML+ + + + M G D L+ +AG H D + +
Sbjct: 339 TMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQ 398
Query: 579 GEIPHPLFFTEMLIQAIVQSN-YEKAVALINAM 610
G +P+ L LI +++ N + A+ L N M
Sbjct: 399 GVLPN-LHTYNTLISGLLRVNRLDDALDLFNNM 430
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/352 (18%), Positives = 147/352 (41%), Gaps = 42/352 (11%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
L P I + ++ L +VG + ++L + M + + PD+ Y
Sbjct: 164 LQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCR---------------PDVYTYTT 208
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
++N + + K++ ++G +P+ TY ++S+R+ + ++NE
Sbjct: 209 IINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRK------------DRRVNE 256
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
A+ M+ +G+ Y L LCN +W++A ++ +++SL + P +TF L+
Sbjct: 257 ALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSL-NIMPDIVTFNVLV 315
Query: 440 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
+ G + + + + M + EP++ T ++++ YS +A++LF+
Sbjct: 316 DTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGC- 374
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
KPD ++Y+ ++ + + + ++ M G + + L+
Sbjct: 375 ------------KPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHG 422
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ G + F ++ G +P+ ++ +L Q + KA L AM
Sbjct: 423 LCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAM 474
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 36/252 (14%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VLVD + + ++ ++ M + G+ L+ G + +A + D +
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K D+ F Y L+ K R EA ++FN M+ L P+ +Y+++ L Q+G
Sbjct: 373 GCKPDV---FSYNILINGYCKVKRIDEAKQLFNEMIHQ-GLTPNNVSYNTLIHGLCQLGS 428
Query: 280 LKELVKLIERM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
L+E L + M +Q + + R +P+LV+YN
Sbjct: 429 LREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNI 488
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
+++A S + +F +L GL+P+A Y ++ +EG ++E
Sbjct: 489 LIDAMCKSGNLRDARKLFSELFVKGLQPNAQIY------------TTIINGLCKEGLLDE 536
Query: 380 AVAAVRNMEQRG 391
A+ A RNME+ G
Sbjct: 537 ALEAFRNMEEDG 548
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 133/320 (41%), Gaps = 44/320 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL + W++A ++L+ + L D+ + + L+ + K G+ EA + M
Sbjct: 279 LIQGLCNFSQWKEASALLNEMRSLNIMPDIVT---FNVLVDTICKEGKVSEAQGVLKTMT 335
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + PD+ Y S+ + E KL + M K K PD+
Sbjct: 336 E-MGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCK---------------PDVF 379
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-----GLA-MESYR--RCLLK-- 365
YN ++N + +F ++ GL P+ +Y GL + S R R L K
Sbjct: 380 SYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNM 439
Query: 366 -------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
+L+ F ++G +A R M+ +Y L +C +G
Sbjct: 440 HTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNL 499
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 471
+DA + ++ ++ +P +T +I G +D+ + F++M +D C P+ + N
Sbjct: 500 RDARKLFSEL-FVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNV 558
Query: 472 MLKVYSRNDMFSKAKELFEE 491
+++ + + S+A +L E
Sbjct: 559 IIRGFLHHKDESRAVQLIGE 578
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 78/205 (38%), Gaps = 34/205 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL GS R+A ++ + +L + F Y+ LL K G +A R+F M
Sbjct: 419 LIHGLCQLGSLREARNLFK---NMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAM- 474
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P++ Y+ + + + G L++ KL + K L+P+
Sbjct: 475 QSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKG---------------LQPNAQ 519
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+Y ++N F+ + + G P +Y V++R F
Sbjct: 520 IYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISY------------NVIIRGFLHHK 567
Query: 376 KINEAVAAVRNMEQRGV---VGTAS 397
+ AV + M +G VGT +
Sbjct: 568 DESRAVQLIGEMRDKGFIADVGTTA 592
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 151/370 (40%), Gaps = 45/370 (12%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
R A +F+ M++ L PD ++++ L +VG + V+ +
Sbjct: 145 RVDLAFSVFSKMIK-LGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGC------- 196
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
+P + Y ++N + +FK++ ++G +P+ TY
Sbjct: 197 --------QPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTY---------- 238
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
+L+ + ++ +NEA+ M+ + + Y L LCN RW++A ++ ++
Sbjct: 239 --NILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEM 296
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM 481
SL + P TF L+ + G + + +F+ M + EP++ T ++++ YS
Sbjct: 297 TSL-NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRME 355
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
+A++LF+ KPD ++Y+ +++ A + + + ++ M
Sbjct: 356 IVEARKLFDAMITKGC-------------KPDAFSYNILIKGYCKAKRIDEAKQLFNEMI 402
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY- 600
G D + L+ + G+ + F ++ G +P LF ML+ + Y
Sbjct: 403 HQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPD-LFTYSMLLDGFCKEGYL 461
Query: 601 EKAVALINAM 610
KA L M
Sbjct: 462 GKAFRLFRVM 471
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 125/305 (40%), Gaps = 29/305 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L PD+ + +++ + F VF ++ K GL+P A T+ L+
Sbjct: 126 LSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTF------------NTLIN 173
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+ GK +AV + E G T Y + LC G A + +K++ +
Sbjct: 174 GLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEE-AGCQ 232
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P +T+ LI S +++ + IF +MK P+I T N++++ + +A L
Sbjct: 233 PNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASAL 292
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
E T N + P+ +T++ +++A + + V+K M G + D
Sbjct: 293 LNEMTSLN-------------IMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPD 339
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALI 607
++ L+ S + FD+++ G P F +LI+ ++ ++A L
Sbjct: 340 VVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDA-FSYNILIKGYCKAKRIDEAKQLF 398
Query: 608 NAMAY 612
N M +
Sbjct: 399 NEMIH 403
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 135/317 (42%), Gaps = 38/317 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL + W++A ++L+ + L ++ F + L+ + K G+ EA +F M
Sbjct: 276 LIQGLCNFRRWKEASALLNEMTSLNIMPNI---FTFNVLVDAICKEGKVSEAQGVFKTMT 332
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK-----------------PSKRI 298
E + PD+ Y S+ + E KL + M K +KRI
Sbjct: 333 E-MGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRI 391
Query: 299 ---KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
K + + L PD V YN +++ + + +FK + +G P TY +
Sbjct: 392 DEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSM- 450
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+ F +EG + +A R M+ + ++Y L +C G +DA
Sbjct: 451 -----------LLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDA 499
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLK 474
+ ++ ++ P +T +I + G +D+ + F++M+ D C P+ + N +++
Sbjct: 500 RKLFSEL-FVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIR 558
Query: 475 VYSRNDMFSKAKELFEE 491
+ + S+A +L E
Sbjct: 559 GFLQYKDESRAAQLIGE 575
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 134/331 (40%), Gaps = 45/331 (13%)
Query: 237 ILG--KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
ILG KAG P A+R F M + L P + +V + LG G E L E +R+
Sbjct: 264 ILGFSKAGDPTRAMR-FLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENG 322
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
S EP YNA+L V + K +V ++ K+G+KP TY L
Sbjct: 323 S---------------EPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSL 367
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
+++Y WE +I ++ ME V + VY + + G WQ
Sbjct: 368 LIDAYAHA-------GRWESARI-----VLKEMEASNVEPNSYVYSRILASYRDKGEWQK 415
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 473
+ V++ +KS +P + +I + +D ++ F+ M + P+ T N ++
Sbjct: 416 SFQVLKDMKS-NGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLI 474
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
+ ++ + A+ELF E + GY+ P TY+ M+ + +WE
Sbjct: 475 NCHCKSGRHNMAEELFGEMQQ---RGYS----------PCITTYNIMINSMGEQQRWEQV 521
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
M G + + L+ ++G+
Sbjct: 522 SLFLSKMQSQGLLPNSITYTTLVDVYGKSGR 552
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 154/384 (40%), Gaps = 68/384 (17%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE---LVKLIERMRQKP 294
LG +GR HEA +F + E+ + P AY+++ + G LK+ +V +E+ KP
Sbjct: 302 LGNSGRTHEAEALFEEIRENGS-EPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKP 360
Query: 295 SKRIKNM------HRKNWDPV-----------LEPDLVVYNAVLNACVPSHQWKGVFWVF 337
++ ++ H W+ +EP+ VY+ +L + +W+ F V
Sbjct: 361 DEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVL 420
Query: 338 KQLRKSGLKPSAATYGL-------------AMESYRRCLLK----------VLVRAFWEE 374
K ++ +G++P Y + AM ++ R L + L+ +
Sbjct: 421 KDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKS 480
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
G+ N A M+QRG + Y + + RW+ L + K++S + P IT
Sbjct: 481 GRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQS-QGLLPNSIT 539
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+T L+ G D I + +K +P NA++ Y++ + A F T
Sbjct: 540 YTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMT 599
Query: 494 ---------------------RANSSGYTFLS-GDGAPLKPDEYTYSSMLEASATAHQWE 531
R ++ + L ++PD TY+++++A +++
Sbjct: 600 TEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQ 659
Query: 532 YFEYVYKGMALSGCQLDQTKHAWL 555
VY+ M SGC D+ A L
Sbjct: 660 KVPAVYEEMVTSGCTPDRKARAML 683
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 119/303 (39%), Gaps = 48/303 (15%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC------ 362
VL P + YNA++ AC + + + ++R+ G +P Y ++ R
Sbjct: 182 VLTP--LTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSP 239
Query: 363 -------------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
L+ ++ F + G A+ + + G+ S +
Sbjct: 240 ILQKLYTEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVI 299
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHC 462
L N+GR +A + E+I+ S+P + L+ + G + D + M K
Sbjct: 300 LALGNSGRTHEAEALFEEIRE-NGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGV 358
Query: 463 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
+P+ T + ++ Y+ + A+ + +E +N ++P+ Y YS +L
Sbjct: 359 KPDEQTYSLLIDAYAHAGRWESARIVLKEMEASN-------------VEPNSYVYSRILA 405
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAG 579
+ +W+ V K M +G Q D +H + V GK + L+HA F+ +L G
Sbjct: 406 SYRDKGEWQKSFQVLKDMKSNGVQPD--RHFY-NVMIDTFGKYNCLDHAMATFERMLSEG 462
Query: 580 EIP 582
P
Sbjct: 463 IRP 465
>gi|255557939|ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540762|gb|EEF42322.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 145/347 (41%), Gaps = 36/347 (10%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
E +L+D W + M Q G K++ D G W++A+ +++
Sbjct: 127 ETYEILLDYNVNAGRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEE 186
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ + D + +Y ++ GK G EAL + + M + + PDI ++S+
Sbjct: 187 IREMGMPLD---KHIYNSIIDTFGKYGELDEALEVLSNMQQQ-GITPDIVTWNSLIRWHC 242
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
+ G L + ++L +M+ + L PD + +++ +W +
Sbjct: 243 KAGNLSKALELFSKMQAQG---------------LYPDPKILVTIISRLAEQGKWNIIRE 287
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
F ++ G K S A Y +LV + + G+ +A + ++ G++ +
Sbjct: 288 NFDIMKSWGYKKSGAIYA------------ILVDIYGQYGRFQDAEECISALKSEGILPS 335
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
AS++ LA G + + V++ +++ +P I LI + G + +SI+
Sbjct: 336 ASMFCVLANAYAQQGLCEQTVKVLQLMEA-EGIEPNLIMLNVLINAFGIAGRHREALSIY 394
Query: 456 QHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
HMK+ P++ T + ++K Y R F + E++ E SSG T
Sbjct: 395 HHMKESGISPDVVTYSTLMKAYIRARKFDEVPEIYSEM---ESSGCT 438
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 95/223 (42%), Gaps = 40/223 (17%)
Query: 143 VEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGD 202
V W+ RW +A + ++ S+ M GL ++ ++ L +
Sbjct: 232 VTWNSLIRWHCKAGNLSKALELFSK-------------MQAQGLYPDPKILVTIISRLAE 278
Query: 203 KGSW---RQAMSVL-DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC 258
+G W R+ ++ W Y KS +Y L+ I G+ GR +A + + +
Sbjct: 279 QGKWNIIRENFDIMKSWGYK-------KSGAIYAILVDIYGQYGRFQDAEECISALKSE- 330
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
+ P + + +A Q GL ++ VK+++ M + +EP+L++ N
Sbjct: 331 GILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEG---------------IEPNLIMLN 375
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
++NA + + + ++ +++SG+ P TY M++Y R
Sbjct: 376 VLINAFGIAGRHREALSIYHHMKESGISPDVVTYSTLMKAYIR 418
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 125/303 (41%), Gaps = 29/303 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L+P L +YN +L + + V + L GL + TY + LL V
Sbjct: 87 LKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEI--------LLDYNVN 138
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
A G++ + + + M+Q+G + VY ++ +NG W+ A+ ++E+I+ +
Sbjct: 139 A----GRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREM--GM 192
Query: 430 PLEITFTGLIISSMDG-GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKE 487
PL+ II + G +D+ + + +M+ P+I T N++++ + + SKA E
Sbjct: 193 PLDKHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALE 252
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
LF ++ + G L PD +++ A +W + M G +
Sbjct: 253 LF---SKMQAQG----------LYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKK 299
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 607
+A L+ + G+ E +L G +P F + Q E+ V ++
Sbjct: 300 SGAIYAILVDIYGQYGRFQDAEECISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVL 359
Query: 608 NAM 610
M
Sbjct: 360 QLM 362
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 185/423 (43%), Gaps = 48/423 (11%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
SR +Y +++ K G P A ++ + ++ +++ ++ G++ L +
Sbjct: 553 SRKIYESMISAYCKLGFPETAHQLMDEAVQSGISLNILSSRVTMIEAYGKIKLWQHAENF 612
Query: 287 IERMRQKPS--KRIKN--MH-----------RKNWDPVLE----PDLVVYNAVLNACVPS 327
++ ++Q+PS +RI N +H R +D ++E P + N ++ A +
Sbjct: 613 VKGLKQEPSIDRRIWNALIHAYAESGLYEHARAVFDIMIEKGPLPTIDSVNGMMRALIID 672
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ ++ + ++L+ G K S +T L ++ AF + G I E + M
Sbjct: 673 GRLDELYVIVQELQDMGFKISKSTVILMLD------------AFTKAGDIFEVMKIYNGM 720
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
++ G + +Y + LC N R++D L+V +++ L I T L++ + G+
Sbjct: 721 KEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYT-GNGN 779
Query: 448 IDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
D + ++ ++ EPN T N ++ +YSRN + +E G+T L+
Sbjct: 780 FDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRN---LRPEE-----------GFTLLNEM 825
Query: 507 GAP-LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
G L P +Y S+L AS A WE E +++ + G +L+++ + L+ A
Sbjct: 826 GKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNH 885
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 625
E S+ E G P ++ + ++A ++N++ + ++ ++ +
Sbjct: 886 SKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTV 945
Query: 626 FES 628
F +
Sbjct: 946 FNA 948
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/384 (20%), Positives = 148/384 (38%), Gaps = 45/384 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK--ELVKLI 287
V+ ++ + ++GR + ++ + M L PD+ +++++ + G L L+
Sbjct: 65 VFNAMMGVYARSGRFDDVRQLLDAM-RGQELEPDLVSFNTLINARAKSGCLAPGSAFDLL 123
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+RQ L PD++ YN +++AC VF+++ S +P
Sbjct: 124 LEVRQVG---------------LRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRP 168
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
TY + + RC GK +A R + ++G A Y L
Sbjct: 169 DLWTYNAMVSVHGRC------------GKAQDAERMFRELVEKGFKPDAVTYNSLLYAFA 216
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI 466
G V E++ K IT+ +I G +D + ++ M+ C P+
Sbjct: 217 KEGDADTVERVCEELVRAGFKKD-GITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDA 275
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T ++ + D S A ++ EE A LKP T+S+++ A A
Sbjct: 276 VTYTVLIDSLGKMDRISDAGKVLEEMADAG-------------LKPTLVTFSALICAYAK 322
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
+ E + M SG + D+ + +L +R+G L + +++ G P
Sbjct: 323 GGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQTMMNDGYRPDNAL 382
Query: 587 FTEMLIQAIVQSNYEKAVALINAM 610
+ ML + Y++ A++ M
Sbjct: 383 YQVMLAALAKGNEYDEIEAVVQDM 406
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/489 (19%), Positives = 187/489 (38%), Gaps = 63/489 (12%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+LL L + P ALR+ N L + P Y + LG VG L + L+ MR+
Sbjct: 43 QLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRR 102
Query: 293 KPSK-RIKNMHR-------------------KNWDPV--LEPDLVVYNAVLNACVPSHQW 330
+ + ++ +H P+ ++ D VVYN +LN V +
Sbjct: 103 EGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKM 162
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-----------------------LLKVL 367
K + V+ ++ G+KP T+ M++ R L
Sbjct: 163 KLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTL 222
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
++ F EEG I A+ M + G T L C GR +DA+ +++ +
Sbjct: 223 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ-EIADG 281
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
+P +IT+ + H+ + + M ++ +P++ T N ++ +N +AK
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
+ + D L PD T+++++ A T ++ E + + + + G
Sbjct: 342 GILNQMV------------DRGCL-PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS 388
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
D L+ + G HL F+ + +G P + + ++ KA+ L
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448
Query: 607 INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 666
+ M + + + + ++ ++ E++ + + + + IT + L +
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL---IDG 505
Query: 667 LCRSEKERD 675
LC+ +K D
Sbjct: 506 LCKDKKIDD 514
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/454 (19%), Positives = 172/454 (37%), Gaps = 55/454 (12%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M+ G+ E L++G ++GS A+ V + + ++ L+ K
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCS---ATKVTVNVLINGYCK 263
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
GR +AL + D PD Y++ L Q + +K+++ M Q+
Sbjct: 264 LGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH----- 317
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+PD+ YN V+N + Q + + Q+ G P T+
Sbjct: 318 ----------DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF-------- 359
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
L+ A ++ EA+ R + +GV + L LC G A+ + E
Sbjct: 360 ----NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 415
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 479
++K+ P E+T+ LI + G + + + + M+ C + T N ++ +
Sbjct: 416 EMKN-SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKK 474
Query: 480 DMFSKAKELFEE-----TTRANSSGYTFLSG-------DGA----------PLKPDEYTY 517
+A+E+F++ +R + T + G D A L+P+ TY
Sbjct: 475 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITY 534
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+S+L + + + M +G ++D + L+ +AG+ + +
Sbjct: 535 NSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594
Query: 578 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
G P P + +L ++N A++L MA
Sbjct: 595 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 103/256 (40%), Gaps = 34/256 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + L+ L K G PH ALR+F M ++ PD Y+++ L +G L + + L++
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450
Query: 289 RMRQKPSKR------------IKNMHRKNWDPVLEP--------DLVVYNAVLNACVPSH 328
M R K M + + V + + + +N +++
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ F + Q+ GL+P+ TY + Y ++G I +A + M
Sbjct: 511 KIDDAFGLINQMISEGLQPNNITYNSILTHY------------CKQGDIKKAADILETMT 558
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
G Y L LC GR Q A+ V+ ++ ++ +P + ++ S +I
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR-IKGMRPTPKAYNPVLQSLFRRNNI 617
Query: 449 DDCISIFQHMKDHCEP 464
D +S+F+ M + EP
Sbjct: 618 RDALSLFREMAEVGEP 633
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 84/206 (40%), Gaps = 33/206 (16%)
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLK------------DKRDL----KSRFVYTKL 234
G+ L LLK + G R ++ + GL D+ DL ++ + L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L K + +A + N M+ + L P+ Y+S+ + G +K+ ++E M
Sbjct: 503 IDGLCKDKKIDDAFGLINQMISE-GLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
E D+V Y ++N + + + V + +R G++P+ Y
Sbjct: 562 ---------------FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606
Query: 355 AMES-YRRCLLKVLVRAFWEEGKINE 379
++S +RR ++ + F E ++ E
Sbjct: 607 VLQSLFRRNNIRDALSLFREMAEVGE 632
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/458 (20%), Positives = 175/458 (38%), Gaps = 59/458 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+ +E M K ++ R M GL+ + + ++KGL + W+ A+S+
Sbjct: 322 VLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSL------F 375
Query: 220 KDKRD--LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
K+ D + F Y L+ L + + EAL ++ M E + P I YHS+ +
Sbjct: 376 KEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNET-GVKPYIVTYHSLLLCYCVN 434
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G + E VKL M P K P++V Y ++ + + + +
Sbjct: 435 GCMDEAVKLYTEM---PGKG------------FTPNVVTYTTLMKGHINKAAFDKAYALL 479
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
+++++G+ + TY L+ G++ E ++ E G V TA
Sbjct: 480 AEMKQNGVSCNDYTY------------NTLINGLCVVGRVCEVGEMLKRFETEGFVPTAM 527
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y + G A V +++ + + P +T+T I DG C +
Sbjct: 528 TYNSIINGFIKAGMMGSAFAVYQQMCA-KGIPPNIVTYTSFI----DGYCKTSCCDLALK 582
Query: 458 MKD--HCE---PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
M + C+ P+I N+++ + + S A ++ + DG L P
Sbjct: 583 MLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVL-----------VLMLKDG--LLP 629
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
+ Y+S + E +Y+ M G LD + L+ S+ G +
Sbjct: 630 NISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLY 689
Query: 573 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
++ G IP + FT + + + A L++ M
Sbjct: 690 SEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEM 727
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 71/380 (18%), Positives = 139/380 (36%), Gaps = 40/380 (10%)
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+F++ + GL P+ TY VL+R EEG +A R M G++ +
Sbjct: 304 IFEETLRDGLVPTDVTY------------TVLIRGCTEEGMPEKAYELCRQMRDHGLLPS 351
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
+ + + L N+ W+DA+ + +++ P T+ LI I + ++++
Sbjct: 352 TNEFNMVIKGLLNDKLWKDAVSLFKEMAD--SGIPDAFTYNILIHWLCQRRKIREALNLW 409
Query: 456 QHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 514
+ M + +P I T +++L Y N +A +L YT + G G P+
Sbjct: 410 EKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKL-----------YTEMPGKG--FTPNV 456
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 574
TY+++++ ++ + M +G + + L+ G+ +
Sbjct: 457 VTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKR 516
Query: 575 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRIS 634
G +P + + ++ I A A+ M +T +
Sbjct: 517 FETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSC 576
Query: 635 RDKLEKLLNALCNCNAASSEITV-----------SNLSRALHALCRSEKERDLSSSAHFG 683
D K+LN + C +I N+S AL L K+ L + + +
Sbjct: 577 CDLALKMLNDV-RCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYN 635
Query: 684 SQAIDISPLHGIHEAFDVKE 703
S L + EA + E
Sbjct: 636 SFITGYKNLKMMEEALRLYE 655
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 82/208 (39%), Gaps = 31/208 (14%)
Query: 254 MLEDC---NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL 310
ML D L PDIAAY+S+ Q G + ++++ M + L
Sbjct: 583 MLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDG---------------L 627
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
P++ VYN+ + + +++++ K G+ ATY L+
Sbjct: 628 LPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATY------------TTLIDG 675
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
F ++G + A+ M +G + + L LC NG DA +++++ L +P
Sbjct: 676 FSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRL-DIRP 734
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM 458
+ + LI + G + + + M
Sbjct: 735 NVLMYNMLINGYLRNGKLQEAFRLHDEM 762
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 131/334 (39%), Gaps = 33/334 (9%)
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
+ V++RA ++EG ++AV M + V LC A+LV+ K+
Sbjct: 179 MFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM 238
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-----EPNIGTVNAMLKVYS 477
+ P + TF ++ + GG +++ + H+KD + ++ ++ Y
Sbjct: 239 QDAGFV-PWDFTFNSVVDVLVKGGRMEEAL----HIKDELLATGKKMSVVLATTLMHGYC 293
Query: 478 RNDMFSKAKELFEETTR----ANSSGYTFL----SGDGAP--------------LKPDEY 515
KA ++FEET R YT L + +G P L P
Sbjct: 294 LQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
++ +++ W+ ++K MA SG D + L+ + K + ++ +
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKM 412
Query: 576 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISR 635
E G P+ + + +L+ V ++AV L M F +T L + + ++ +
Sbjct: 413 NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAF 472
Query: 636 DKLEKLLNALCNCNAASSEITVSNLSRALHALCR 669
DK LL + + ++ T + L L + R
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGR 506
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 145/368 (39%), Gaps = 64/368 (17%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y LL L KA + H+A IF+ M+ + + PD+ +Y L+ K+ E
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSI---------LIDGFCKIDEL- 498
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R + ++++ D P++ YNA LN + + V++++ +G P
Sbjct: 499 -----GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVI 553
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY L+ F K ++A M RG A Y L LC
Sbjct: 554 TY------------STLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKES 601
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGT 468
+ +A + K+ R P +T+T L+ + G I+ + +F M K H +P++
Sbjct: 602 KPDEAHELFRKMVE-RGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGH-DPDVVA 659
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
N +LK + R +AK+LF+ KPD +++ M++ + A
Sbjct: 660 YNCLLKGFFRAGKPGEAKQLFQVMVSRQC-------------KPDTVSHNIMIDGLSKAK 706
Query: 529 QWEYFEYVYKGMALS-GCQLDQTKHAWLLVEASRAGKCHLLE-----------------H 570
+ + V++ M GC D + L+ G+ L E H
Sbjct: 707 RLDDAVEVFERMEQDHGCSPDLVTYNSLIF--GLCGEQRLSEAMKVFKEIDRLKLSPDPH 764
Query: 571 AFDSLLEA 578
AF+ LLEA
Sbjct: 765 AFNVLLEA 772
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/361 (18%), Positives = 140/361 (38%), Gaps = 32/361 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++P ++V+ + + + + + K G P AT+ + L+
Sbjct: 370 IQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSM------------LIN 417
Query: 370 AFWEEGKINEAVAAVRNMEQR--GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
+ KI EA ++ M+++ + Y L LC + A + + S R
Sbjct: 418 ELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERS 477
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAK 486
P ++++ LI + +++ M D +C PN+ T NA L R + A+
Sbjct: 478 FVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQ 537
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
++EE A S PD TYS+++ + A + + +++ M GC+
Sbjct: 538 GVYEEMVAAGCS-------------PDVITYSTLIHGFSLARKHDQAHELFETMISRGCR 584
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
+ + LL + K F ++E G P + +T +L E+AV +
Sbjct: 585 PNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEV 644
Query: 607 INAM---AYAPFHITERQWTE-LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSR 662
+ M + P + + F + + ++ + +++ C + S I + LS+
Sbjct: 645 FDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSK 704
Query: 663 A 663
A
Sbjct: 705 A 705
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G + G QA+ V D + D+ Y LL +AG+P EA ++F +M+
Sbjct: 628 LLYGFCNVGKIEQAVEVFDEMVSKGHDPDV---VAYNCLLKGFFRAGKPGEAKQLFQVMV 684
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
PD +++ + L + L + V++ ERM Q D PDLV
Sbjct: 685 SR-QCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQ--------------DHGCSPDLV 729
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
YN+++ + VFK++ + L P + + +E+ +
Sbjct: 730 TYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIK 774
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 146/352 (41%), Gaps = 40/352 (11%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
D+ YN +L+ + K VF+++ G+ P+ TY VLV++
Sbjct: 128 DVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYA------------VLVQSSC 175
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
E +EAV M +G ++++Y ++ CL G+ + V + L +E
Sbjct: 176 YERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFG--RDLEKRVAVE 233
Query: 433 ITF-TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF- 489
+ L+++ + + +F+ M K C+P+ + M+ + + + +A +LF
Sbjct: 234 MMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFL 293
Query: 490 ----EETTRANSSGYT-FLSGDGAPLKPDE-YTYSSMLEASATAHQWEYFEYVYKGMALS 543
E N+ +T FLSG K ++ + ++ S ++ Q Y + + + + S
Sbjct: 294 EMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVY-DMLIRLLIES 352
Query: 544 GCQLDQTKHAWLLVEASR----AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
G ++D+ + A L + +G CH L +AG + L E +I+ +
Sbjct: 353 G-RIDKAEEACLEIAGRNIQPSSGTCH---SVIQELCKAGRVDSALSLLETMIKRGYCPD 408
Query: 600 YEKAVALINAMAYAPFHITERQWTELFESNEDRI-----SRDKLEKLLNALC 646
LIN + A I E Q E + + +I S LLN+LC
Sbjct: 409 MATHSMLINELCKAD-KIQEAQ--EFLQGMDRKISSRSSSCFSYNSLLNSLC 457
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 153/397 (38%), Gaps = 58/397 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y ++ +AG A R M++ PD Y+ + L G + + + + +
Sbjct: 129 ITYNTMVNGYCRAGNIDAARR----MIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFD 184
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +HR P +V Y+ +L+A +K + ++R G +P
Sbjct: 185 DM----------LHRG-----CSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPD 229
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY VL+ A +G + EA+ + ++ G A Y + LC+
Sbjct: 230 IVTY------------NVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCS 277
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 467
+ RW++A ++ K+ S P E+TF +I S G + + M +H C P+I
Sbjct: 278 SERWEEADKLLTKMFS-NDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDII 336
Query: 468 TVNAMLKVYSRNDMFSKA----KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
T ++++ + +A KEL E N PD+ T+++++ +
Sbjct: 337 TYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCI-------------PDQVTFNTIITS 383
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL---LEAGE 580
++ V M+ GC D T + +V+ C E A D L + G
Sbjct: 384 LCQKGLFDRAIKVVDEMSEHGCIPDITTYNC-IVDGFLCKSCK-TEEALDLLNLMVSNGL 441
Query: 581 IPHPLFFTEMLIQAIVQSNYEKAVAL---INAMAYAP 614
P + + + E+A+ + + AM +P
Sbjct: 442 CPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSP 478
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 176/468 (37%), Gaps = 65/468 (13%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+ +L A + V + S + T M+ G G+ A ++D V
Sbjct: 101 ILIKKLCADGRVADAERVVEALGPSATIITYNTMVN---GYCRAGNIDAARRMIDSVPFA 157
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
D F Y L+ L G +AL +F+ ML P + Y + +
Sbjct: 158 PDT------FTYNPLIRALCVRGCVLDALAVFDDMLHR-GCSPSVVTYSILLDATCKESG 210
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
K+ V L++ MR K EPD+V YN ++NA V
Sbjct: 211 YKQAVVLLDEMRSKGC---------------EPDIVTYNVLINAMCSQGDVGEALKVLNS 255
Query: 340 LRKSGLKPSAATYGLAMESYRRC-----LLKVLVRAFWEEGKINEAV--AAVRNMEQRGV 392
L G KP A TY ++S K+L + F + +E A + ++ Q+G
Sbjct: 256 LPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGF 315
Query: 393 VGTAS----------------VYYELACCLCNNGRWQDAMLVVEKIKSLRHSK---PLEI 433
VG A+ Y + LC R +A+ +++++ + SK P ++
Sbjct: 316 VGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQV 375
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
TF +I S G D I + M +H C P+I T N ++ + K +E +
Sbjct: 376 TFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKS--CKTEEALDLL 433
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
S+G L PD TY S+ + + E +++ + G D+ +
Sbjct: 434 NLMVSNG----------LCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLY 483
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 600
+L+ + + L F ++ G +P + +L++ I +
Sbjct: 484 NAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYI-ILVEGIAYEGF 530
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/489 (19%), Positives = 187/489 (38%), Gaps = 63/489 (12%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+LL L + P ALR+ N L + P Y + LG VG L + L+ MR+
Sbjct: 43 QLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRR 102
Query: 293 KPSK-RIKNMHR-------------------KNWDPV--LEPDLVVYNAVLNACVPSHQW 330
+ + ++ +H P+ ++ D VVYN +LN V +
Sbjct: 103 EGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKM 162
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-----------------------LLKVL 367
K + V+ ++ G+KP T+ M++ R L
Sbjct: 163 KLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTL 222
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
++ F EEG I A+ M + G T L C GR +DA+ +++ +
Sbjct: 223 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ-EIADG 281
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
+P +IT+ + H+ + + M ++ +P++ T N ++ +N +AK
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
+ + D L PD T+++++ A T ++ E + + + + G
Sbjct: 342 GILNQMV------------DRGCL-PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS 388
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
D L+ + G HL F+ + +G P + + ++ KA+ L
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448
Query: 607 INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 666
+ M + + + + ++ ++ E++ + + + + IT + L +
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL---IDG 505
Query: 667 LCRSEKERD 675
LC+ +K D
Sbjct: 506 LCKDKKIDD 514
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 88/454 (19%), Positives = 172/454 (37%), Gaps = 55/454 (12%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M+ G+ E L++G ++GS A+ V + + ++ L+ K
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCS---ATKVTVNVLINGYCK 263
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
GR +AL + D PD Y++ L Q + +K+++ M Q+
Sbjct: 264 LGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH----- 317
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+PD+ YN V+N + Q + + Q+ G P T+
Sbjct: 318 ----------DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF-------- 359
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
L+ A ++ EA+ R + +GV + L LC G A+ + E
Sbjct: 360 ----NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 415
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 479
++K+ P E+T+ LI + G + + + + M+ C + T N ++ +
Sbjct: 416 EMKN-SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKK 474
Query: 480 DMFSKAKELFEE-----TTRANSSGYTFLSG-------DGA----------PLKPDEYTY 517
+A+E+F++ +R + T + G D A L+P+ TY
Sbjct: 475 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITY 534
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+S+L + + + M +G ++D + L+ +AG+ + +
Sbjct: 535 NSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594
Query: 578 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
G P P + +L ++N A++L MA
Sbjct: 595 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 103/256 (40%), Gaps = 34/256 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + L+ L K G PH ALR+F M ++ PD Y+++ L +G L + + L++
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450
Query: 289 RMRQKPSKR------------IKNMHRKNWDPVLEP--------DLVVYNAVLNACVPSH 328
M R K M + + V + + + +N +++
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ F + Q+ GL+P+ TY + Y ++G I +A + M
Sbjct: 511 KIDDAFELINQMISEGLQPNNITYNSILTHY------------CKQGDIKKAADILETMT 558
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
G Y L LC GR Q A+ V+ ++ ++ +P + ++ S +I
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR-IKGMRPTPKAYNPVLQSLFRRNNI 617
Query: 449 DDCISIFQHMKDHCEP 464
D +S+F+ M + EP
Sbjct: 618 RDALSLFREMAEVGEP 633
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 84/206 (40%), Gaps = 33/206 (16%)
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLK------------DKRDL----KSRFVYTKL 234
G+ L LLK + G R ++ + GL D+ DL ++ + L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L K + +A + N M+ + L P+ Y+S+ + G +K+ ++E M
Sbjct: 503 IDGLCKDKKIDDAFELINQMISE-GLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
E D+V Y ++N + + + V + +R G++P+ Y
Sbjct: 562 ---------------FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606
Query: 355 AMES-YRRCLLKVLVRAFWEEGKINE 379
++S +RR ++ + F E ++ E
Sbjct: 607 VLQSLFRRNNIRDALSLFREMAEVGE 632
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/489 (19%), Positives = 187/489 (38%), Gaps = 63/489 (12%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+LL L + P ALR+ N L + P Y + LG VG L + L+ MR+
Sbjct: 43 QLLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRR 102
Query: 293 KPSK-RIKNMHR-------------------KNWDPV--LEPDLVVYNAVLNACVPSHQW 330
+ + ++ +H P+ ++ D VVYN +LN V +
Sbjct: 103 EGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKM 162
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-----------------------LLKVL 367
K + V+ ++ G+KP T+ M++ R L
Sbjct: 163 KLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTL 222
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
++ F EEG I A+ M + G T L C GR +DA+ +++ +
Sbjct: 223 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQ-EIADG 281
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
+P +IT+ + H+ + + M ++ +P++ T N ++ +N +AK
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
+ + D L PD T+++++ A T ++ E + + + + G
Sbjct: 342 GILNQMV------------DRGCL-PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVS 388
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
D L+ + G HL F+ + +G P + + ++ KA+ L
Sbjct: 389 PDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDL 448
Query: 607 INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 666
+ M + + + + ++ ++ E++ + + + + IT + L +
Sbjct: 449 LKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL---IDG 505
Query: 667 LCRSEKERD 675
LC+ +K D
Sbjct: 506 LCKDKKIDD 514
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 88/454 (19%), Positives = 172/454 (37%), Gaps = 55/454 (12%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M+ G+ E L++G ++GS A+ V + + ++ L+ K
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCS---ATKVTVNVLINGYCK 263
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
GR +AL + D PD Y++ L Q + +K+++ M Q+
Sbjct: 264 LGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH----- 317
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+PD+ YN V+N + Q + + Q+ G P T+
Sbjct: 318 ----------DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF-------- 359
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
L+ A ++ EA+ R + +GV + L LC G A+ + E
Sbjct: 360 ----NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFE 415
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 479
++K+ P E+T+ LI + G + + + + M+ C + T N ++ +
Sbjct: 416 EMKN-SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKK 474
Query: 480 DMFSKAKELFEE-----TTRANSSGYTFLSG-------DGA----------PLKPDEYTY 517
+A+E+F++ +R + T + G D A L+P+ TY
Sbjct: 475 MRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITY 534
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+S+L + + + M +G ++D + L+ +AG+ + +
Sbjct: 535 NSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRI 594
Query: 578 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
G P P + +L ++N A++L MA
Sbjct: 595 KGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMA 628
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 103/256 (40%), Gaps = 34/256 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + L+ L K G PH ALR+F M ++ PD Y+++ L +G L + + L++
Sbjct: 392 YTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450
Query: 289 RMRQKPSKR------------IKNMHRKNWDPVLEP--------DLVVYNAVLNACVPSH 328
M R K M + + V + + + +N +++
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ F + Q+ GL+P+ TY + Y ++G I +A + M
Sbjct: 511 KIDDAFELINQMISEGLQPNNITYNSILTHY------------CKQGDIKKAADILETMT 558
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
G Y L LC GR Q A+ V+ ++ ++ +P + ++ S +I
Sbjct: 559 ANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR-IKGMRPTPKAYNPVLQSLFRRNNI 617
Query: 449 DDCISIFQHMKDHCEP 464
D +S+F+ M + EP
Sbjct: 618 RDALSLFREMAEVGEP 633
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 84/206 (40%), Gaps = 33/206 (16%)
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLK------------DKRDL----KSRFVYTKL 234
G+ L LLK + G R ++ + GL D+ DL ++ + L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L K + +A + N M+ + L P+ Y+S+ + G +K+ ++E M
Sbjct: 503 IDGLCKDKKIDDAFELINQMISE-GLQPNNITYNSILTHYCKQGDIKKAADILETMTANG 561
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
E D+V Y ++N + + + V + +R G++P+ Y
Sbjct: 562 ---------------FEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 606
Query: 355 AMES-YRRCLLKVLVRAFWEEGKINE 379
++S +RR ++ + F E ++ E
Sbjct: 607 VLQSLFRRNNIRDALSLFREMAEVGE 632
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 143/361 (39%), Gaps = 60/361 (16%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+R Y ++A L KA A+ + +M+ P+ Y+S+ G
Sbjct: 39 DRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVMV-----MPNCFTYNSIMHGYCSSG-- 91
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
S++ + RK +EPD+V YN++++ + + +F +
Sbjct: 92 -------------QSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSM 138
Query: 341 RKSGLKPSAATYGLAMESYR-----------------------RCLLKVLVRAFWEEGKI 377
K GLKP TYG + Y + +L+ A+ ++ K+
Sbjct: 139 VKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKV 198
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+E V M Q+G+ A Y + LC GR DAML E++ + P + +T
Sbjct: 199 DEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMID-KGLTPNVVVYTS 257
Query: 438 LI--ISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
LI + + D + + IF+ + PNI N +L + ++K+LF+
Sbjct: 258 LIHALCTYDKWEKAEEL-IFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFD----- 311
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
L G + PD TYS++++ A + + + GM G + D ++ L
Sbjct: 312 ------LLGHIG--VNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTL 363
Query: 556 L 556
+
Sbjct: 364 I 364
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 141/367 (38%), Gaps = 76/367 (20%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L K G+ EA +IF+ M++ L PDI Y ++ G L E+ L+ M
Sbjct: 115 YNSLMDYLCKNGKCTEARKIFDSMVKR-GLKPDITTYGTLLHGYASKGALVEMHDLLALM 173
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q ++ D V+N ++ A + V VF ++R+ GL P+A
Sbjct: 174 VQNG---------------MQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAV 218
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
Y + ++ + G++++A+ M +G+ VY L LC
Sbjct: 219 NY------------RTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYD 266
Query: 411 RWQDAMLVVEKIKS--------------------------------LRH--SKPLEITFT 436
+W+ A ++ +I L H P IT++
Sbjct: 267 KWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYS 326
Query: 437 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
LI G +D + + M +P+ T + ++ Y + + A LF+E
Sbjct: 327 TLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKE---M 383
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
S+G + PD TY+ +L + + +Y + SG QL+ + + +
Sbjct: 384 ESNG----------VNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNII 433
Query: 556 LVEASRA 562
L++ ++
Sbjct: 434 LMDFAKT 440
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 174/436 (39%), Gaps = 79/436 (18%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G R A +L + L DK + + +Y ++ L + R +A ++ M + N+YPD
Sbjct: 249 GRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAM-DKINVYPD 307
Query: 264 IAAYHSVAVTLGQVGL-LKELVKLIERMRQKPSKRIKN---------------------- 300
+ TL + G KE+ ++ E+M +K K ++
Sbjct: 308 NVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQ 367
Query: 301 --MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
M +K + + +VYN +++A S+ + V +F ++R GLKPSAATY + M++
Sbjct: 368 TEMEKKG----IRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDA 423
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ----- 413
Y R + +V +R ME G+ Y C + GR +
Sbjct: 424 YARRMQPDIVETL------------LREMEDLGLEPNVKSY---TCLISAYGRTKKMSDM 468
Query: 414 --DAMLVVEKIKSLRHSKPLEITFTGLIIS-SMDGGHIDDCISIFQHMKDHCEPNIGTVN 470
DA L ++K+ KP ++T LI + S+ G H S + K+ +P++ T
Sbjct: 469 AADAFLRMKKV----GLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYT 524
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGY-----TFLSG-----------------DGA 508
++L + R+ K E+++ R G T L G
Sbjct: 525 SVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKM 584
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
L+P TY+ ++ A A Q + K MA + D ++ ++ R
Sbjct: 585 GLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRA 644
Query: 569 EHAFDSLLEAGEIPHP 584
++++G++P P
Sbjct: 645 FFYHKMMVKSGQVPDP 660
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 148/384 (38%), Gaps = 33/384 (8%)
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+ L++ + R+R +R + + D P+ +N +++ VF ++
Sbjct: 109 ENLLRRVVRLRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEI 168
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
K GL+P+ ++ L+ + G + E ME V +
Sbjct: 169 PKRGLRPTVVSF------------NTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFS 216
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-K 459
L LC GR + L+ +++ + P +TFT LI GG +D + FQ M
Sbjct: 217 ALINGLCKEGRLDEGSLLFDEMCG-KGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLA 275
Query: 460 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
P++ T NA++ + +A+ L E + +SG L+PD T+++
Sbjct: 276 QGVRPDLVTYNALINGLCKVGDLKEARRLVNEMS---ASG----------LRPDRITFTT 322
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 579
+++ E + + M G +LD L+ R G+ H E +L AG
Sbjct: 323 LIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAG 382
Query: 580 EIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRISRD 636
P +T ++ + N L+ M + P +T + L +
Sbjct: 383 FKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVT---YNALMNGLCKQGQVK 439
Query: 637 KLEKLLNALCNCNAASSEITVSNL 660
+ LL+A+ N A ++IT + L
Sbjct: 440 NAKMLLDAMLNVGVAPNDITYNIL 463
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 139/352 (39%), Gaps = 39/352 (11%)
Query: 147 PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
P++ R + L+ + + ++ +M + L+ GL +G
Sbjct: 169 PKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRL 228
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+ + D + G K + + +T L+ K G+ AL+ F +ML + PD+
Sbjct: 229 DEGSLLFDEMCG---KGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQ-GVRPDLVT 284
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y+++ L +VG LKE +L+ M L PD + + +++ C
Sbjct: 285 YNALINGLCKVGDLKEARRLVNEMSASG---------------LRPDRITFTTLIDGCCK 329
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRN 386
+ + +++ + G++ + VL+ +G++++A +R+
Sbjct: 330 YGDMESALEIKRRMVEEGIELDDVAF------------TVLISGLCRDGRVHDAERMLRD 377
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
M G Y + C C G ++++++S H P +T+ L+ G
Sbjct: 378 MLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHV-PGVVTYNALMNGLCKQG 436
Query: 447 HIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRN------DMFSKAKELFEE 491
+ + + M + PN T N +L+ +S++ D+F+ K L ++
Sbjct: 437 QVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVDIFNSEKGLVKD 488
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 116/271 (42%), Gaps = 33/271 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ ++G W + ++ ++ + ++ Y+ L++ L + GR EA+ + +M+
Sbjct: 283 LLRAFLNQGKWDEGEKLVAEMF---SRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 339
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E L PD +Y + L + G L + +++ M PD+V
Sbjct: 340 EK-ELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCL---------------PDIV 383
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN +L A + +F +LR G P+ ++Y ++ A W G
Sbjct: 384 NYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY------------NTMISALWSCG 431
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ A+ V M +GV Y L CLC +G ++A+ +++ ++ +P I++
Sbjct: 432 DRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ-SGFRPTVISY 490
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDH-CEPN 465
+++ IDD I +F M + C PN
Sbjct: 491 NIVLLGLCKVRRIDDAIGMFAEMIEKGCRPN 521
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 96/490 (19%), Positives = 186/490 (37%), Gaps = 52/490 (10%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
F E ++KLL G + +++ L+ L +K + TKL+ +A
Sbjct: 66 FRETHLMKLLNRSCKAGKFNESLYFLEC---LVNKGYTPDVILCTKLIKGFFNFKNIEKA 122
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWD 307
R+ ++ + + PD+ AY++V +V ++ +++ RM+ +
Sbjct: 123 SRVMEIL--ESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARG------------- 167
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
PD+V YN ++ + + V QL P+ TY +L
Sbjct: 168 --FLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITY------------TIL 213
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
+ A EG INEA+ + M RG++ Y + +C G + A ++ + S +
Sbjct: 214 IEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTS-KG 272
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 486
KP I++ L+ + ++ G D+ + M CEPN T + ++ R +A
Sbjct: 273 CKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 332
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
+ + L PD Y+Y ++ A + + + M +GC
Sbjct: 333 SVLKVMIEKE-------------LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCL 379
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
D + +L + G + F+ L G P+ + M+ + +A+ +
Sbjct: 380 PDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGM 439
Query: 607 INAMAYAPFHITERQWTELFESNEDRISRDKL-EKLLNALCNCNAASSEITVSNLSRALH 665
+ AM E + L + RD L E+ + L + + TV + + L
Sbjct: 440 VPAMISKGVDPDEITYNSLISC----LCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLL 495
Query: 666 ALCRSEKERD 675
LC+ + D
Sbjct: 496 GLCKVRRIDD 505
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 147/386 (38%), Gaps = 49/386 (12%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
AL++ + +L D N P + Y + G + E +KL+E M +
Sbjct: 191 ALKVLDQLLLD-NCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG------------ 237
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
L PD+ YNA++ + + L G KP +Y +
Sbjct: 238 ---LLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISY------------NI 282
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L+RAF +GK +E V M RG Y L LC GR +A+ V+ K+ +
Sbjct: 283 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVL-KVMIEK 341
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
P ++ LI + G +D I I +M + C P+I N +L +N ++A
Sbjct: 342 ELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQA 401
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
E+F + L G G P P+ +Y++M+ A + + M G
Sbjct: 402 LEIFNK-----------LRGMGCP--PNVSSYNTMISALWSCGDRSRALGMVPAMISKGV 448
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
D+ + L+ R G L+E A D + ++G P + + +L+ +
Sbjct: 449 DPDEITYNSLISCLCRDG---LVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDD 505
Query: 603 AVALINAMAYAPFHITERQWTELFES 628
A+ + M E + L E
Sbjct: 506 AIGMFAEMIEKGCRPNETTYILLIEG 531
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/467 (18%), Positives = 182/467 (38%), Gaps = 49/467 (10%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E++ + +L+D L + T K + + M G+ ++ GL G +
Sbjct: 254 ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFE 313
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A S+L + ++ S Y L++ L K A + + + PD+ Y
Sbjct: 314 RAHSLLAV---MAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSS-GFVPDVVTY 369
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+A L + G + E +L++ M K P+LV YN +++ +
Sbjct: 370 SILADGLCKRGRIDEAFELVKEMSGKGCT---------------PNLVTYNTLIDGLCKA 414
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ + + + + L SG P TY ++V +EG++++A+ V M
Sbjct: 415 SKTEKAYELLESLVSSGFVPDVVTY------------TIIVDGLCKEGRLDKALKMVEGM 462
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+RG + Y L LC GR +A + +++ S + + + L+
Sbjct: 463 LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS-KDCTADALAYVSLVNGYCKSSR 521
Query: 448 IDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
+ + ++ P I NA++ Y + + +FE+ ++ G
Sbjct: 522 TKEAQKVVDGIRG--TPYIDVYNALMDGYCKEGRLDEIPNVFED-----------MACRG 568
Query: 508 APLKPDEYTYSSMLEASATAHQW-EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
P+ TY+ +++ + E F ++ + M +GC D + ++ +A K
Sbjct: 569 C--VPNIKTYNIVMDGLCKHGKVDEAFPFL-ESMHSAGCVPDVVSYNIIIDGLFKASKPK 625
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 613
D +++AG P + + ++ Q + ++ AV ++ M A
Sbjct: 626 EARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKA 672
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 107/542 (19%), Positives = 198/542 (36%), Gaps = 95/542 (17%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
L+D L + T K ++ + + SG + ++ GL +G +A L V G+
Sbjct: 406 TLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKA---LKMVEGM 462
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVG 278
+ S YT L+ L + GR EA IF M+ +DC D AY S+ +
Sbjct: 463 LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCT--ADALAYVSLVNGYCKSS 520
Query: 279 LLKELVKLIERMRQKPSKRIKNM----------------------------HRKNWDPVL 310
KE K+++ +R P + N + K ++ V+
Sbjct: 521 RTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVM 580
Query: 311 E------------------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ PD+V YN +++ + + K V Q+ ++G+
Sbjct: 581 DGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIP 640
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P A TY L+ F +E + ++AV ++NM + GV Y L L
Sbjct: 641 PDAVTY------------NTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 688
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLE--ITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 463
R DA ++ ++ LR+ + T+ +I G + + + HM H E
Sbjct: 689 SQTNRLGDAYELMHEM--LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVE 746
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEE--TTRANSSGYTFLSG-------DGAP----- 509
N T N + + +A L E T R S T + G D A
Sbjct: 747 ANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLARE 806
Query: 510 ------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
L +T++ +++A + + + M GC + ++ +
Sbjct: 807 MVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLD 866
Query: 564 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 623
K FD + G + + +T ++ Q ++A+ ++ MA + I + +W
Sbjct: 867 KVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWE 926
Query: 624 EL 625
++
Sbjct: 927 DV 928
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/441 (18%), Positives = 157/441 (35%), Gaps = 79/441 (17%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S F L L + G +F ML D PD YH V +L Q+ + + +
Sbjct: 124 STFTRNCFLQTLLENGSSDRIPAMFERML-DAGYAPDSYTYHLVIKSLCQMNQIDKAFTM 182
Query: 287 IERMRQ---KPSKRIKNMHRKNWDP-------------VLEPDLVVYNAVLNACVPSHQW 330
+++ + KP + + + + + PD + YNA+++ +
Sbjct: 183 LDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDC 242
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
G K++ + + P TY +L+ + K ++A + M R
Sbjct: 243 DGALEFLKEMNERKVAPDVFTY------------NILIDGLCKASKTDKASEMLHEMVDR 290
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI----------- 439
GV + + LC G+++ A ++ + + R+ +P T+ LI
Sbjct: 291 GVTPDTVTFNSIMDGLCKAGKFERAHSLL-AVMAERNCRPSCCTYNTLISGLCKQQNVDR 349
Query: 440 --------ISS------------MDG----GHIDDCISIFQHMKDH-CEPNIGTVNAMLK 474
+SS DG G ID+ + + M C PN+ T N ++
Sbjct: 350 AKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLID 409
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
+ KA EL E SSG+ PD TY+ +++ + +
Sbjct: 410 GLCKASKTEKAYELLESLV---SSGFV----------PDVVTYTIIVDGLCKEGRLDKAL 456
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 594
+ +GM GC + L+ R G+ H F ++ L + ++
Sbjct: 457 KMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGY 516
Query: 595 IVQSNYEKAVALINAMAYAPF 615
S ++A +++ + P+
Sbjct: 517 CKSSRTKEAQKVVDGIRGTPY 537
>gi|302761606|ref|XP_002964225.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
gi|300167954|gb|EFJ34558.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
Length = 580
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 164/391 (41%), Gaps = 59/391 (15%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S F Y L+ L K R EALR++ LM + N+ DI Y+++ + ++G++++ K+
Sbjct: 172 STFEYNCLIEGLCKGDRIDEALRLYELMRGN-NVPADIFTYNNMIECISKLGMVEQAEKV 230
Query: 287 IERMRQ---KPSKRI---------KNMHRKNWDPVL--------EPDLVVYNAVLNACVP 326
++ M + KP K I K + KN +L PD VV++ ++
Sbjct: 231 LKTMEESDCKPDKFIYTRVINGFCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCK 290
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-----LLKVLVRAFWEEGKINEAV 381
+ ++ V K ++G +P TY + R+C L L++ + GK+ A
Sbjct: 291 TSKFDEALVVLKVSIEAGCEPDEVTY-FKLAQERKCPATNLLYSRLMKCLCKTGKVEAAC 349
Query: 382 AAVRNM-----EQRGVVGTAS-----VYYELAC-CLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ ++ E ++G V Y + LC G + +VV+ ++ R KP
Sbjct: 350 QLLEDLTNGSRESEQLLGGDGCKPDVVMYSIVIDALCAMGMTDEGFVVVKAMEE-RGVKP 408
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+ +T + + +DD + + M + C P++ + N +L +A LF
Sbjct: 409 DAVVYTIFLYAFCRSARLDDACRLLEMMVEAGCYPDVISYNTLLFALCSAGQEEEACRLF 468
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
+ ++P+ +TY+ ++ A + + E +++ M LS C D
Sbjct: 469 QVMVETG-------------IEPNVFTYTQLIRALCSTKKLEGARHLFNFMKLSKCVPDM 515
Query: 550 TKHAWLLV-----EASRAGKCHLLEHAFDSL 575
+ L++ E R + LLE D+
Sbjct: 516 ETYKALILGHYQNEGVREAR-QLLEQESDAF 545
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/354 (19%), Positives = 147/354 (41%), Gaps = 38/354 (10%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ +S+ M + K ++ M +S + +++ G G+++ A+ +L +K
Sbjct: 214 MIECISKLGMVEQAEKVLKTMEESDCKPDKFIYTRVINGFCKLGNFKNAVVLLGR---MK 270
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV-------- 272
+ V+ ++ L K + EAL + + +E PD Y +A
Sbjct: 271 EAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEA-GCEPDEVTYFKLAQERKCPATN 329
Query: 273 --------TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
L + G ++ +L+E + + + + +PD+V+Y+ V++A
Sbjct: 330 LLYSRLMKCLCKTGKVEAACQLLEDLTNGSRESEQLLGGDGC----KPDVVMYSIVIDAL 385
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAV 384
F V K + + G+KP A Y + + AF ++++A +
Sbjct: 386 CAMGMTDEGFVVVKAMEERGVKPDAVVY------------TIFLYAFCRSARLDDACRLL 433
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
M + G Y L LC+ G+ ++A + + + +P T+T LI +
Sbjct: 434 EMMVEAGCYPDVISYNTLLFALCSAGQEEEACRLFQVMVE-TGIEPNVFTYTQLIRALCS 492
Query: 445 GGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
++ +F MK C P++ T A++ + +N+ +A++L E+ + A S
Sbjct: 493 TKKLEGARHLFNFMKLSKCVPDMETYKALILGHYQNEGVREARQLLEQESDAFS 546
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 144/354 (40%), Gaps = 46/354 (12%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
T L++ LG AGR EA +F + P AY+++ ++ LK ++++ M
Sbjct: 267 TALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMS 326
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
Q + PD Y+ +++A + +W+ + K++ G+KPS+
Sbjct: 327 QC---------------GVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYV 371
Query: 352 YGLAMESYR-----------------------RCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ + +R R V++ F + + A+ A M
Sbjct: 372 FSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMR 431
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
+ G+ + L C GR A + E+++ + P T+ +I + H
Sbjct: 432 EEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRE-SNCPPGTTTYNIMINLLGEQEHW 490
Query: 449 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE----ETTRANSSGYTFL 503
+ ++ MK+ PNI T ++ VY R+ + +A + E + + + + Y L
Sbjct: 491 EGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHAL 550
Query: 504 SGDGAP--LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
A L+PD TY+++++A Q++ +Y+ M SGC D+ A L
Sbjct: 551 VNAYAQRGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAML 604
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 117/293 (39%), Gaps = 36/293 (12%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++P YNA+L V K V ++ + G+ P ATY L +++Y R
Sbjct: 295 IKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRA------- 347
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
WE +I ++ ME GV ++ V+ + + G WQ A V+ ++++ +
Sbjct: 348 GRWESARI-----LLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQA-SGVR 401
Query: 430 PLEITFTGLIISSMDG----GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
P + F ++I + GH D F M++ EP++ T N ++ + + +
Sbjct: 402 P-DRHFYNVMIDTFGKYNCLGHAMDA---FNKMREEGIEPDVVTWNTLIDAHCKGGRHDR 457
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A ELFEE +N P TY+ M+ WE E + M G
Sbjct: 458 AAELFEEMRESNC-------------PPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQG 504
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 597
+ + L+ R+G+ +++ G P P + L+ A Q
Sbjct: 505 LVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMY-HALVNAYAQ 556
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 102/258 (39%), Gaps = 35/258 (13%)
Query: 172 AKNWKFVRI----MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
A W+ RI M G+ + ++L G D+G W++A +VL + + D
Sbjct: 347 AGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPD--- 403
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y ++ GK A+ FN M E+ + PD+ ++++ + G +L
Sbjct: 404 RHFYNVMIDTFGKYNCLGHAMDAFNKMREE-GIEPDVVTWNTLIDAHCKGGRHDRAAELF 462
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E MR+ P YN ++N W+GV + ++++ GL P
Sbjct: 463 EEMRESNCP---------------PGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVP 507
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ TY LV + G+ EA+ + M+ G+ + ++Y+ L
Sbjct: 508 NIITY------------TTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYA 555
Query: 408 NNGRWQDAMLVVEKIKSL 425
G D + +K+L
Sbjct: 556 QRGLRPDVITYTTLMKAL 573
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/458 (20%), Positives = 174/458 (37%), Gaps = 59/458 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+ +E M K ++ R M GL+ + + ++KGL + W+ A+S+
Sbjct: 322 VLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSL------F 375
Query: 220 KDKRD--LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
K+ D + F Y L+ L + + EAL ++ M E + P I YHS+ +
Sbjct: 376 KEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNET-GVKPYIVTYHSLLLCYCVN 434
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G + E VKL M P K P++V Y ++ + + + +
Sbjct: 435 GCMDEAVKLYTEM---PGKG------------FTPNVVTYTTLMKGHINKAAFDKAYALL 479
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
+++++G+ + TY L+ G++ E ++ E G V TA
Sbjct: 480 AEMKQNGVSCNDYTY------------NTLINGLCVVGRVCEVGEMLKRFETEGFVPTAM 527
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y + G A V +++ + + P +T+T I DG C +
Sbjct: 528 TYNSIINGFIKAGMMGSAFAVYQQMCA-KGIPPNIVTYTSFI----DGYCKTSCCDLALK 582
Query: 458 MKD--HCE---PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
M + C+ P+I N+++ + + S A ++ + DG L P
Sbjct: 583 MLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVL-----------VLMLKDG--LLP 629
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
+ Y+S + E Y+ M G LD + L+ S+ G +
Sbjct: 630 NISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLY 689
Query: 573 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
++ G IP + FT + + + A L++ M
Sbjct: 690 SEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEM 727
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 83/189 (43%), Gaps = 28/189 (14%)
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+F++ + GL P+ TY VL+R EEG +A R M G++ +
Sbjct: 304 IFEETLRDGLVPTDVTY------------TVLIRGCTEEGMPEKAYELCRQMRDHGLLPS 351
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
+ + + L N+ W+DA+ + +++ P T+ LI I + ++++
Sbjct: 352 TNEFNMVIKGLLNDKLWKDAVSLFKEMAD--SGIPDAFTYNILIHWLCQRRKIREALNLW 409
Query: 456 QHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 514
+ M + +P I T +++L Y N +A +L YT + G G P+
Sbjct: 410 EKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKL-----------YTEMPGKG--FTPNV 456
Query: 515 YTYSSMLEA 523
TY+++++
Sbjct: 457 VTYTTLMKG 465
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 81/208 (38%), Gaps = 31/208 (14%)
Query: 254 MLEDC---NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL 310
ML D L PDIAAY+S+ Q G + ++++ M + L
Sbjct: 583 MLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDG---------------L 627
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
P++ VYN+ + + ++++ K G+ ATY L+
Sbjct: 628 LPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATY------------TTLIDG 675
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
F ++G + A+ M +G + + L LC NG DA +++++ L +P
Sbjct: 676 FSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRL-DIRP 734
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM 458
+ + LI + G + + + M
Sbjct: 735 NVLMYNMLINGYLRNGKLQEAFRLHDEM 762
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 131/334 (39%), Gaps = 33/334 (9%)
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
+ V++RA ++EG ++AV M + V LC A+LV+ K+
Sbjct: 179 MFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM 238
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-----EPNIGTVNAMLKVYS 477
+ P + TF ++ + GG +++ + H+KD + ++ ++ Y
Sbjct: 239 QDAGFV-PWDFTFNSVVDVLVKGGRMEEAL----HIKDELLATGKKMSVVLATTLMHGYC 293
Query: 478 RNDMFSKAKELFEETTR----ANSSGYTFL----SGDGAP--------------LKPDEY 515
KA ++FEET R YT L + +G P L P
Sbjct: 294 LQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
++ +++ W+ ++K MA SG D + L+ + K + ++ +
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKM 412
Query: 576 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISR 635
E G P+ + + +L+ V ++AV L M F +T L + + ++ +
Sbjct: 413 NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAF 472
Query: 636 DKLEKLLNALCNCNAASSEITVSNLSRALHALCR 669
DK LL + + ++ T + L L + R
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGR 506
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 178/447 (39%), Gaps = 64/447 (14%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
ALR+ + + L PD Y +V L G + + V L+ H
Sbjct: 297 ALRVVHRSIPAWKLVPDKFTYSTVVSALADAGRVDDAVALV--------------HEMVV 342
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
D V+ + +N VL A + + G +F ++ G PSAATY + + C
Sbjct: 343 DGVVAAE--AFNPVLGAMLRTGDVTGAAKLFSFMQLKGCAPSAATYNVLLHGLLLC---- 396
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
G+ A+ +R ME+ VV Y + L GR +DA V+E+++S +
Sbjct: 397 --------GRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMRS-K 447
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
P E F+ +I G +D ++ M +PN+ +AM+ +R ++A
Sbjct: 448 GLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMTEA 507
Query: 486 KELFEETTRANS-----------SGYTFLSGDGA------------PLKPDEYTYSSMLE 522
+ LF E A GY F GD + P+ TYS ++
Sbjct: 508 ELLFREMIEAKCVPNIMTYSSMVRGY-FQIGDSSQALSFWEDMLRIGCTPNAVTYSVLIN 566
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ + V+K M GC D + ++ +G F +L G+
Sbjct: 567 GLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDT- 625
Query: 583 HP-LFFTEMLIQAIVQS-NYEKAVALINAM---AYAPFHITERQWTELFESNEDRISRDK 637
HP + +L+ ++++ + +A+ L+N M A P +T + E + ++
Sbjct: 626 HPDVICYNVLLDGLLRAKDLPRAMDLLNQMLDQACDPDTVTCNTFLREIEVGQK--GQEF 683
Query: 638 LEKLLNALCN--CNAASSEITVSNLSR 662
LE L+ LCN N A+ E+ + L++
Sbjct: 684 LEGLVVRLCNRKRNKAAGEVLMVMLAK 710
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y LL L GR A+ + M E + P + Y +V L + G L++ K+IE M
Sbjct: 386 YNVLLHGLLLCGRAKAAMGVMRRM-ERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEM 444
Query: 291 RQK---PSK-----------RIKNMHRKN--WDPV----LEPDLVVYNAVLNACVPSHQW 330
R K P++ ++ + R + WD + ++P++V+Y+A+++ +
Sbjct: 445 RSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKM 504
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
+F+++ ++ P+ TY +VR +++ G ++A++ +M +
Sbjct: 505 TEAELLFREMIEAKCVPNIMTY------------SSMVRGYFQIGDSSQALSFWEDMLRI 552
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
G A Y L LCN GR +DAM+V + + R P I +T +I G +D
Sbjct: 553 GCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLG-RGCVPDTIAYTSMIKGFCVSGMVDA 611
Query: 451 CISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+ +F M + P++ N +L R +A +L +
Sbjct: 612 GLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQ 654
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/493 (21%), Positives = 197/493 (39%), Gaps = 87/493 (17%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVR-IMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
K WR E ++ L DR+ + + +FV +++ S + T ++K +G + +W+
Sbjct: 106 KDWR---ERVKFLTDRI----LGLRPDQFVADVLDDSKVQMTPTDFCFVVKWVGQE-NWQ 157
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A+ V +W+ L+ +R + T +LA+LGKA + A+ IF + + + + Y
Sbjct: 158 RALEVFEWL-NLRHWYSPNARMLAT-ILAVLGKANQEALAVEIF--IRAESTVDNTVQVY 213
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSK------------RIK------NMHRKNWDPV 309
+++ + G ++ +++ MR++ + R+K N+ + + V
Sbjct: 214 NAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEV 273
Query: 310 ----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC--- 362
L PD++ YN +++AC + VF + +P TY + Y RC
Sbjct: 274 RRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFS 333
Query: 363 -----LLK---------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
L K L+ AF EG +++ M Q G + Y +
Sbjct: 334 GKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTI 393
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-H 461
G+ A+ + +K L P IT+T LI S + + ++ M +
Sbjct: 394 IHMYGKQGQHGLALQLYRDMK-LSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIG 452
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
+P + T +A++ Y+R +A+E F+ R+ ++PD+ YS ML
Sbjct: 453 VKPTLRTYSALICGYARAGQRLEAEETFDCMRRSG-------------IRPDQLAYSVML 499
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK--------------CHL 567
+ + +Y+ M G D T + +L R K C +
Sbjct: 500 DVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDMEEVCGM 559
Query: 568 LEHAFDSLLEAGE 580
A S+L GE
Sbjct: 560 NPQAIASILVKGE 572
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 417 LVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 473
+ +E + +R S +P IT+ LI + ++++ + +F M+ H C+P++ T NAM+
Sbjct: 265 VAIELLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMI 324
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
VY R KA++LF+E S GY PD TY+S+L A A +
Sbjct: 325 SVYGRCGFSGKAEQLFKEL---ESKGYF----------PDAVTYNSLLYAFAREGNVDKV 371
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 593
+ + M G D+ + ++ + G+ L + + +G P + +T +LI
Sbjct: 372 KEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYT-VLID 430
Query: 594 AIVQSNYEKAVALINAMA 611
++ ++N K V N M+
Sbjct: 431 SLGKAN--KMVEAANVMS 446
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 75/445 (16%), Positives = 166/445 (37%), Gaps = 66/445 (14%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S+ +Y ++ + K G P A + +L + + I+ +V T G++ L ++ L
Sbjct: 698 SKSLYRSMVLMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVAVIETYGKLKLWQKAESL 757
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLE------------------------PDLVVYNAVLN 322
+ +RQ R N+ RK W+ +++ P + N +L
Sbjct: 758 VGNLRQ----RCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQ 813
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-------------------- 362
A + + + ++ V ++++ G + S ++ L ++++ R
Sbjct: 814 ALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFP 873
Query: 363 ---LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
L ++++ + ++ + A V ME+ G S++ + ++ + +
Sbjct: 874 TMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIY 933
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSR 478
++IK +P E T+ LI+ ++ S+ M+ EP + T +++ + +
Sbjct: 934 QRIKE-DGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGK 992
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
+ A+ELFEE S K D Y M++ + E +
Sbjct: 993 QQLVVDAEELFEELLSKGS-------------KLDRSFYHIMMKIYRNSGNHSKAEKLLS 1039
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
M +G + L+V +G+ E +L E G L ++ ++ +
Sbjct: 1040 MMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNK 1099
Query: 599 NYEKAVALINAMAYAPFHITERQWT 623
+Y + + M R WT
Sbjct: 1100 DYSVGIQKLVEMKKEGLEPDHRIWT 1124
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 84/229 (36%), Gaps = 26/229 (11%)
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD-CISIFQHMKDHCEPNIGTVN 470
WQ A+ V E + +LRH I++ + + + + IF + + + N
Sbjct: 156 WQRALEVFEWL-NLRHWYSPNARMLATILAVLGKANQEALAVEIFIRAESTVDNTVQVYN 214
Query: 471 AMLKVYSRNDMFSKAKELF----EETTRANSSGYTFL------SGDGAP----------- 509
AM+ VY+R F+K + + E + + L +G P
Sbjct: 215 AMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVR 274
Query: 510 ---LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
L+PD TY++++ A + E V+ M CQ D + ++ R G
Sbjct: 275 RSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSG 334
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
E F L G P + + +L + N +K + N M F
Sbjct: 335 KAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGF 383
>gi|168023641|ref|XP_001764346.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684498|gb|EDQ70900.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 978
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 150/347 (43%), Gaps = 50/347 (14%)
Query: 216 VYGLKDKRDLKSR-FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
V L + R LK+ YT L++ KAG+ +IF+ M ++A + T
Sbjct: 317 VLALLESRGLKADCMFYTSLISACAKAGKVDLLFQIFHEM--------EVAGIEANVHTF 368
Query: 275 GQVGLLKELVKLIERMRQKPSK--RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
G ++ R Q P M KN ++PD V++N ++NAC + +
Sbjct: 369 G------AMIDGCARAGQLPKAFGAYGIMISKN----VKPDRVIFNTLINACTRAGAVQR 418
Query: 333 VFWVFKQLR--KSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
F V ++ + +KP TYG L+ A G+++ A+ +NM +
Sbjct: 419 AFDVLTDMKAEATPIKPDHVTYG------------ALISACARAGEVDRALEVYQNMRES 466
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
V G+ + Y + G A+LV + +K KP E+ F+ L+ ++ I+
Sbjct: 467 NVKGSPACYTAVVHACSQKGNVDYALLVYDDLKK-DGVKPDEVFFSALVDAAGHAQDIEK 525
Query: 451 CISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
SI +M K+ +P ++++ V S + KA E++++ SSG
Sbjct: 526 AFSIIANMKKEGLKPGAVVYSSLMGVCSNLGNWEKALEVYQDI---RSSG---------- 572
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
L+P T+++++ A A+Q+ + + + SG +Q ++ LL
Sbjct: 573 LQPTVSTFNALMTALCEANQFTRALSILQDVKNSGIMPNQISYSILL 619
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 114/274 (41%), Gaps = 39/274 (14%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
+AG+ +A + +M+ N+ PD ++++ + G ++ ++ M+ + +
Sbjct: 377 RAGQLPKAFGAYGIMISK-NVKPDRVIFNTLINACTRAGAVQRAFDVLTDMKAEATP--- 432
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
++PD V Y A+++AC + + V++ +R+S +K S A Y + +
Sbjct: 433 ----------IKPDHVTYGALISACARAGEVDRALEVYQNMRESNVKGSPACYTAVVHAC 482
Query: 360 RR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
+ LV A I +A + + NM++ G+ A
Sbjct: 483 SQKGNVDYALLVYDDLKKDGVKPDEVFFSALVDAAGHAQDIEKAFSIIANMKKEGLKPGA 542
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
VY L N G W+ A+ V + I+S +P TF L+ + + +SI Q
Sbjct: 543 VVYSSLMGVCSNLGNWEKALEVYQDIRS-SGLQPTVSTFNALMTALCEANQFTRALSILQ 601
Query: 457 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+K+ PN + + +L+ + M A +L+
Sbjct: 602 DVKNSGIMPNQISYSILLRACEKEKMADMALDLY 635
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 129/338 (38%), Gaps = 36/338 (10%)
Query: 364 LKVLVRAFWE----EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
+KV F+E G + +A A + M + + +Y + +C + + D L V
Sbjct: 262 MKVNHSKFYEACKARGSVEDAFAFAKLMREFSTLQ----HYTMLLSVCCHAKDIDGALRV 317
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSR 478
+ R K + +T LI + G +D IF M+ E N+ T AM+ +R
Sbjct: 318 LALLESRGLKADCMFYTSLISACAKAGKVDLLFQIFHEMEVAGIEANVHTFGAMIDGCAR 377
Query: 479 NDMFSKA-------------------KELFEETTRANSSGYTF-----LSGDGAPLKPDE 514
KA L TRA + F + + P+KPD
Sbjct: 378 AGQLPKAFGAYGIMISKNVKPDRVIFNTLINACTRAGAVQRAFDVLTDMKAEATPIKPDH 437
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 574
TY +++ A A A + + VY+ M S + + ++ S+ G +D
Sbjct: 438 VTYGALISACARAGEVDRALEVYQNMRESNVKGSPACYTAVVHACSQKGNVDYALLVYDD 497
Query: 575 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRIS 634
L + G P +FF+ ++ A + EKA ++I M ++ L +
Sbjct: 498 LKKDGVKPDEVFFSALVDAAGHAQDIEKAFSIIANMKKEGLKPGAVVYSSLMGVCSN--- 554
Query: 635 RDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEK 672
EK L + ++ + TVS + + ALC + +
Sbjct: 555 LGNWEKALEVYQDIRSSGLQPTVSTFNALMTALCEANQ 592
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/300 (18%), Positives = 126/300 (42%), Gaps = 27/300 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L+ D + Y ++++AC + + +F +F ++ +G++ + T+G ++ R
Sbjct: 326 LKADCMFYTSLISACAKAGKVDLLFQIFHEMEVAGIEANVHTFGAMIDGCARA------- 378
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS-LRHS 428
G++ +A A M + V ++ L G Q A V+ +K+
Sbjct: 379 -----GQLPKAFGAYGIMISKNVKPDRVIFNTLINACTRAGAVQRAFDVLTDMKAEATPI 433
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKE 487
KP +T+ LI + G +D + ++Q+M++ + + + A++ S+ A
Sbjct: 434 KPDHVTYGALISACARAGEVDRALEVYQNMRESNVKGSPACYTAVVHACSQKGNVDYALL 493
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
++++ L DG +KPDE +S++++A+ A E + M G +
Sbjct: 494 VYDD-----------LKKDG--VKPDEVFFSALVDAAGHAQDIEKAFSIIANMKKEGLKP 540
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 607
++ L+ S G + + +G P F ++ + + +A++++
Sbjct: 541 GAVVYSSLMGVCSNLGNWEKALEVYQDIRSSGLQPTVSTFNALMTALCEANQFTRALSIL 600
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 86/212 (40%), Gaps = 42/212 (19%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG----------- 278
Y L++ +AG AL ++ M E N+ A Y +V Q G
Sbjct: 439 TYGALISACARAGEVDRALEVYQNMRES-NVKGSPACYTAVVHACSQKGNVDYALLVYDD 497
Query: 279 LLKELVK--------LIERMR-----QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
L K+ VK L++ +K I NM ++ L+P VVY++++ C
Sbjct: 498 LKKDGVKPDEVFFSALVDAAGHAQDIEKAFSIIANMKKEG----LKPGAVVYSSLMGVCS 553
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
W+ V++ +R SGL+P+ +T+ L+ A E + A++ ++
Sbjct: 554 NLGNWEKALEVYQDIRSSGLQPTVSTF------------NALMTALCEANQFTRALSILQ 601
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
+++ G++ + Y + C + D L
Sbjct: 602 DVKNSGIMPN-QISYSILLRACEKEKMADMAL 632
>gi|224141335|ref|XP_002324029.1| predicted protein [Populus trichocarpa]
gi|222867031|gb|EEF04162.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 172/405 (42%), Gaps = 66/405 (16%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
W++++++LDW+ + R S F Y +L + +A + A +F+ M + L PD
Sbjct: 87 WQRSLALLDWINDIA--RYSPSVFAYNVVLRNVLRAKQWDHAHGLFDEM-RNRALAPDRY 143
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y ++ G+ G+ + +++M Q R+ DLV+Y+ ++
Sbjct: 144 TYSTLITHFGKAGMFDASLFWLQQMEQD---RVSG------------DLVLYSNLIELSR 188
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
+ +F +L++SG+ P Y ++ F + EA ++
Sbjct: 189 KLCDYSKAISIFMRLKRSGIMPDLVAYN------------SMINVFGKAKLFREAKLLMK 236
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M + GV+ Y L N ++ +A+ V ++ + PL++T ++I
Sbjct: 237 EMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKC--PLDLTTCNVMIDVY-- 292
Query: 446 GHID---DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF----EETTRANS 497
G +D + +F M+ EPN+ + N +L+VY ++F +A LF ++ N
Sbjct: 293 GQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNV 352
Query: 498 SGY-TFLSGDGAPL-----------------KPDEYTYSSMLEASATAHQWEYFEYVYKG 539
Y T + G L +P+ TYS+++ A + + +++
Sbjct: 353 VTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQK 412
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
+ SG ++DQ + ++V R+G L+ HA LL E+ HP
Sbjct: 413 LRSSGVEIDQVLYQTMIVAYERSG---LVAHA-KRLLH--ELKHP 451
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 79/396 (19%), Positives = 154/396 (38%), Gaps = 50/396 (12%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M + G+M LL + + +A+SV + K DL + V ++ + G+
Sbjct: 238 MREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTCNV---MIDVYGQ 294
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
EA R+F M + P++ +Y+++ G+ L E + L M++K
Sbjct: 295 LDMAKEADRLFWSM-RKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKD------ 347
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+E ++V YN ++ S + + + ++++ G++P+A TY
Sbjct: 348 ---------IEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYS------- 391
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
++ + + GK++ A + + GV +Y + +G A ++
Sbjct: 392 -----TIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLH 446
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRN 479
++K S P E L G I++ +F+ D E +I M+ ++SRN
Sbjct: 447 ELKH-PDSIPRETAIKIL----ARAGRIEEATWVFRQAFDAGEVKDISVFGCMVDLFSRN 501
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
+ E+FE+ GA PD + +L A H++E + +YK
Sbjct: 502 RKPANVIEVFEKMR-------------GAGYFPDSNVIALVLNAYGKLHEFEKADALYKE 548
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
M C H +L ++E F+ L
Sbjct: 549 MQEEECVFPDEVHFQMLSLYGARKDFMMIEALFERL 584
>gi|449018641|dbj|BAM82043.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 805
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 161/372 (43%), Gaps = 44/372 (11%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
R+++S K+L+ L K+GR +AL + ++ + ++ D+A+Y + LG+ G +
Sbjct: 356 REIRSTRQLNKILSALYKSGRAADALSLCRIVEREGHIEIDVASYSILISCLGKCGASAQ 415
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
+++ +M I+N + P+ ++A+ A + +F+ +R
Sbjct: 416 AIEMFHKM-------IRNG--------VAPNAFTFSALFGALTDGAFFDQAMRLFQMIRA 460
Query: 343 SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
S P+ L + Y +LK + RA G+I+ A+ + MEQ V V Y
Sbjct: 461 S--YPNE----LNVVVY-NAVLKYVGRA----GRIDAALDLLGQMEQNRNVQPDIVTYGT 509
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHMK- 459
+C + QD L + +R +P + LI + G D S+F+ ++
Sbjct: 510 ILDIC--AKKQDVSLAYAVLDRMRKRGMRPNNFCYASLIDACARAGLPDQAESLFRQLRA 567
Query: 460 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
+ E ++ NA+L ++R M +A + FEE A G D T+++
Sbjct: 568 EGLEYDLFICNALLGAFARAKMVERAFQAFEEMRSAGVRG-------------DRITFNT 614
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 579
++ A+A A +++ ++ M S D T + L+ S++G L F+ + +A
Sbjct: 615 LITAAARAREFDKAWKAFETMKKSNISADATTYNALIDACSKSGMTELAFALFNEMRQAH 674
Query: 580 EIPHPLFFTEML 591
P F ++
Sbjct: 675 LQPTIFTFNALI 686
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 140/353 (39%), Gaps = 36/353 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+ L + +A+ + M ++G+ L L D + QAM + +
Sbjct: 402 ILISCLGKCGASAQAIEMFHKMIRNGVAPNAFTFSALFGALTDGAFFDQAMRLFQMIRA- 460
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ + VY +L +G+AGR AL + M ++ N+ PDI Y ++ +
Sbjct: 461 -SYPNELNVVVYNAVLKYVGRAGRIDAALDLLGQMEQNRNVQPDIVTYGTILDICAKKQD 519
Query: 280 LKELVKLIERMRQKPSK--------------------RIKNMHRKNWDPVLEPDLVVYNA 319
+ +++RMR++ + + +++ R+ LE DL + NA
Sbjct: 520 VSLAYAVLDRMRKRGMRPNNFCYASLIDACARAGLPDQAESLFRQLRAEGLEYDLFICNA 579
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
+L A + + F F+++R +G++ T+ L+ A + ++
Sbjct: 580 LLGAFARAKMVERAFQAFEEMRSAGVRGDRITF------------NTLITAAARAREFDK 627
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
A A M++ + A+ Y L +G + A + +++ H +P TF LI
Sbjct: 628 AWKAFETMKKSNISADATTYNALIDACSKSGMTELAFALFNEMRQA-HLQPTIFTFNALI 686
Query: 440 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+ + + M P+ T+N +L +RN+ F A L E
Sbjct: 687 GACTKLQDMRRATQVLMLMHGFGVYPDTFTLNILLTACARNEDFDYAISLVRE 739
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 107/267 (40%), Gaps = 29/267 (10%)
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT-ASVYYELACCLCNNGRWQDAMLVVEKI 422
L ++ A ++ G+ +A++ R +E+ G + + Y L CL G A+ + K+
Sbjct: 364 LNKILSALYKSGRAADALSLCRIVEREGHIEIDVASYSILISCLGKCGASAQAIEMFHKM 423
Query: 423 KSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC--EPNIGTVNAMLKVYSRN 479
+R+ P TF+ L + DG D + +FQ ++ E N+ NA+LK R
Sbjct: 424 --IRNGVAPNAFTFSALFGALTDGAFFDQAMRLFQMIRASYPNELNVVVYNAVLKYVGRA 481
Query: 480 DMFSKAKELFEETTRAN----------------------SSGYTFLSG-DGAPLKPDEYT 516
A +L + + S Y L ++P+ +
Sbjct: 482 GRIDAALDLLGQMEQNRNVQPDIVTYGTILDICAKKQDVSLAYAVLDRMRKRGMRPNNFC 541
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
Y+S+++A A A + E +++ + G + D LL +RA AF+ +
Sbjct: 542 YASLIDACARAGLPDQAESLFRQLRAEGLEYDLFICNALLGAFARAKMVERAFQAFEEMR 601
Query: 577 EAGEIPHPLFFTEMLIQAIVQSNYEKA 603
AG + F ++ A ++KA
Sbjct: 602 SAGVRGDRITFNTLITAAARAREFDKA 628
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/418 (19%), Positives = 171/418 (40%), Gaps = 64/418 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLED-----CNLYPDIAAYHSVAVTLGQVGLLKELV 284
Y LL L G A+++ ML + P++ Y ++ +L + GL+ +
Sbjct: 199 TYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGK 258
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+L M+ + + PD+V Y+++++ + +W+G +F ++ G
Sbjct: 259 ELFLEMKGRG---------------ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303
Query: 345 LKPSAATYGLAMESYRRC--------LLKVLVR---------------AFWEEGKINEAV 381
+ P+ T+ + +++ + LLK++++ F EG+I++A
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDAR 363
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
+ME +G+ A Y L C +GR +A + ++ + P IT+ L+
Sbjct: 364 DLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMC-KEIMPTVITYNTLLTG 422
Query: 442 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
G + D ++F MK H P T N +L +N+ S+A ELF +
Sbjct: 423 LFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHD---- 478
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
+P ++ +++ A + E ++ ++ G + + + ++
Sbjct: 479 ---------FQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLC 529
Query: 561 RAGKCHLLEHAFDSLL---EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
++G+ LE+A D L E G P+ + F ++ +K V L+ MA F
Sbjct: 530 KSGQ---LENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDF 584
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/306 (18%), Positives = 119/306 (38%), Gaps = 33/306 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P + +N +L A ++ V ++K++ GL P T L +L+ +
Sbjct: 90 PPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFIT------------LNILINCY 137
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
K++ +A + M +RG + L LC R +A ++ K+ + + +P
Sbjct: 138 CNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGY-RPN 196
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKD-------HCEPNIGTVNAMLKVYSRNDMFSK 484
+T+ L+ G+ + + + M + +PN+ ++ ++ + K
Sbjct: 197 VVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDK 256
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
KELF E + G G + PD YSS++ +WE + ++ M G
Sbjct: 257 GKELFLE-----------MKGRG--ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
+ L+ +AGK H +++ GE P + ++ ++ + A
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDAR 363
Query: 605 ALINAM 610
L +M
Sbjct: 364 DLFVSM 369
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 127/319 (39%), Gaps = 42/319 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G+ G W A + + + D+ + + L+ L KAG+ EA + LM+
Sbjct: 279 IIHGMCHTGRWEGAKGLFNE---MVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMI 335
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK-----------------PSKRI 298
+ PD Y+++ G + + L M K S R+
Sbjct: 336 QR-GESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRM 394
Query: 299 ---KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
K ++R+ + P ++ YN +L + + + +F +++ L P + TY
Sbjct: 395 VEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTY--- 451
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+L+ + ++EA+ +E + ++ L LC + + A
Sbjct: 452 ---------NILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIA 502
Query: 416 MLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAM 472
E L H +P IT+T +I G +++ +F M++ C PN+ T N +
Sbjct: 503 R---ELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTL 559
Query: 473 LKVYSRNDMFSKAKELFEE 491
++ + +ND K EL +E
Sbjct: 560 MRGFCQNDEMQKVVELLQE 578
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/491 (18%), Positives = 193/491 (39%), Gaps = 66/491 (13%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+LLA L + P ALR+ N L + P A Y + LG G + L+ MR+
Sbjct: 58 RLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRR 117
Query: 293 KPSKRIKNMHRKNW--------------DPVL----------EPDLVVYNAVLNACVPSH 328
+ +++ + +++ D VL + D VV+N +LN V
Sbjct: 118 E-GHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGS 176
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-----------------------LLK 365
+ K + V+ ++ G++P T +++ R
Sbjct: 177 KLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFT 236
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
L++ F EEG I A+ M + G T L C GR +DA+ +++ +
Sbjct: 237 TLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQ-EIA 295
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 484
+P ++T+ + GH+ + + M ++ +P++ T N ++ S+N +
Sbjct: 296 DGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDE 355
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
AK + + D L PD T+++++ A ++ ++ E + + + + G
Sbjct: 356 AKGIVNQMV------------DRGCL-PDTTTFNTLIVALSSQNRLEEALDLARELTVKG 402
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
D L+ + G HL F+ + +G P + + ++ A+
Sbjct: 403 LSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNAL 462
Query: 605 ALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 664
L+N M + + + ++ ++ ++ E++ + + + S +T + L +
Sbjct: 463 DLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTL---I 519
Query: 665 HALCRSEKERD 675
LC++++ D
Sbjct: 520 DGLCKAKRIDD 530
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 150/417 (35%), Gaps = 81/417 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+ GL G A+ V+D + L++ D F Y ++ L K G EA I N M+
Sbjct: 308 FVHGLCQNGHVSHALKVMDLM--LQEGHD-PDVFTYNTVINCLSKNGELDEAKGIVNQMV 364
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D PD ++++ V L L+E + L + K L PD+
Sbjct: 365 -DRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKG---------------LSPDVY 408
Query: 316 VYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+N ++NA C G+ +F++++ SG P TY +L+
Sbjct: 409 TFNILINALCKVGDPHLGI-RLFEEMKSSGCTPDEVTY------------NILIDHLCSM 455
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
GK+ A+ + ME G + Y + LC R ++A V +++ + S+ +T
Sbjct: 456 GKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRS-AVT 514
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
F LI IDD A EL E+ +
Sbjct: 515 FNTLIDGLCKAKRIDD----------------------------------ATELIEQMVK 540
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
L+P+ TY+S+L + + + M +G ++D +
Sbjct: 541 EG-------------LQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGT 587
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
L+ +AG+ + + G P P + ++ ++N A+ L M
Sbjct: 588 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMT 644
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 99/256 (38%), Gaps = 34/256 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + L+ L K G PH +R+F M + PD Y+ + L +G L + L+
Sbjct: 408 YTFNILINALCKVGDPHLGIRLFEEM-KSSGCTPDEVTYNILIDHLCSMGKLGNALDLLN 466
Query: 289 RMRQKPSKR------------IKNMHRKNWDPVLEP--------DLVVYNAVLNACVPSH 328
M R K M + + V + V +N +++ +
Sbjct: 467 EMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAK 526
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ + +Q+ K GL+P+ TY + Y ++G I +A + M
Sbjct: 527 RIDDATELIEQMVKEGLQPNNITYNSILTHY------------CKQGNIKKAADILETMT 574
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
G Y L LC GR Q A+ ++ ++ ++ +P + +I S ++
Sbjct: 575 ANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR-IKGIRPTPKAYNPVIQSLFRRNNL 633
Query: 449 DDCISIFQHMKDHCEP 464
D +++F+ M + EP
Sbjct: 634 RDALNLFREMTEVGEP 649
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 123/304 (40%), Gaps = 31/304 (10%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+ D++ Y+ +N Q +F+++ + G P + TY +L+
Sbjct: 88 DTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTY------------NILING 135
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
++ ++ V+ + M+ RG T Y L C GR AM ++++++ R P
Sbjct: 136 LCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEH-RGITP 194
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMK---DHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
+T+T LI D G ++ I + + MK + C PN+ T ++ + +F E
Sbjct: 195 NTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGME 254
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
+E +SG P+ TY++++ + + M GC+L
Sbjct: 255 FLDE---------MIISG----CFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCEL 301
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVAL 606
D + L+ + G+ ++E G P +T LIQ + + ++A+ L
Sbjct: 302 DVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTS-LIQGLCDAGLLDEALGL 360
Query: 607 INAM 610
+ M
Sbjct: 361 MQEM 364
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 140/355 (39%), Gaps = 52/355 (14%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D+ +Y L + G + E +++ M +K S PD YN ++N
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSA---------------PDSFTYNILIN 134
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA 382
Q + + +++ G P+ TY L+ F G+++ A+
Sbjct: 135 GLCKDAQLEMGVSLMDEMQARGFSPTVVTY------------TTLIHGFCTAGRVDAAMD 182
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEITFTGLII 440
+ ME RG+ Y L LC+ G + A+LV++++K LR ++ P +T+T LI
Sbjct: 183 ILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMK-LRGNECCPNVVTYTQLIH 241
Query: 441 SSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 499
G + + M C PN T A++ + F +A L E
Sbjct: 242 GLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNE-------- 293
Query: 500 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 559
+ G L D Y+S+++ + ++ + M G D + L+
Sbjct: 294 ---MVAIGCEL--DVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGL 348
Query: 560 SRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSN-YEKAVALINAM 610
AG LL+ A + E G +P+ + +T LI Q++ + A+ L+N M
Sbjct: 349 CDAG---LLDEALGLMQEMRAKGIVPNSVTYTT-LINGFTQADRTDHALQLVNEM 399
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 19/198 (9%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+ L ++ + +F+ M SG L+ GL KGS+ +A +L+ + +
Sbjct: 239 LIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIG 298
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D+ +Y L+ L K G A + LM+E + PD+ Y S+ L GLL
Sbjct: 299 CELDV---VIYNSLIDGLCKMGELDFAREMQILMVEK-GVAPDVFTYTSLIQGLCDAGLL 354
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E + L++ MR K + P+ V Y ++N + + + ++
Sbjct: 355 DEALGLMQEMRAKG---------------IVPNSVTYTTLINGFTQADRTDHALQLVNEM 399
Query: 341 RKSGLKPSAATYGLAMES 358
+ +GL P+ Y + +S
Sbjct: 400 KSNGLMPAGDIYKILFKS 417
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 150/381 (39%), Gaps = 48/381 (12%)
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
D L P+ ++N ++ V + VF +++ G++ + ++
Sbjct: 108 LDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSF------------N 155
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
++ G ++ A R M + GV Y L LC GR +DA V EK+
Sbjct: 156 TMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCG- 214
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
R KP + FT LI + G + + + + M++ P+ T NA++ R
Sbjct: 215 RGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKS 274
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A + E A L+PD TY+++++ + + + + M G
Sbjct: 275 ASGIVVEMRSAG-------------LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEG 321
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV-QSNYEKA 603
LD+ + L+ S+AG+ E ++EAG P +T M+I A + + +
Sbjct: 322 VGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYT-MVIDAFCRKGDVKTG 380
Query: 604 VALINAM-------AYAPFHITERQWTELFE-SNEDRISRDKLEKLLNALCNCNAASSEI 655
+ L+ M +++ + +L + N D LLNA+ N + +I
Sbjct: 381 LRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNAD--------MLLNAMINIGVSPDDI 432
Query: 656 TVSNLSRALHALCRSEKERDL 676
T + L L C+ K D+
Sbjct: 433 TYNIL---LDGHCKHGKVTDI 450
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/349 (19%), Positives = 140/349 (40%), Gaps = 51/349 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L G A +V D + +R + S + +++ + +AG A + M
Sbjct: 122 LMRDLVRLGELASAQNVFDEMQSRGVRRTVVS---FNTMISGMCRAGDLDGAETLHRRMS 178
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM--------------------RQKPS 295
E + PD+ Y ++ L +VG +++ + E+M ++ +
Sbjct: 179 E-AGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDA 237
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ + +HR+ + + PD V YNA++N + K + ++R +GL+P TY
Sbjct: 238 ETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTY--- 294
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+ + +E +++ A+ +NM GV Y L L GR DA
Sbjct: 295 ---------TTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 345
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLK 474
V+ ++ +P T+T +I + G + + + + M++ +P + T N ++
Sbjct: 346 ERVLGEMME-AGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMN 404
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+ + A L S PD+ TY+ +L+
Sbjct: 405 GFCKLGQMKNADMLLNAMINIGVS-------------PDDITYNILLDG 440
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 47/296 (15%)
Query: 304 KNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K W P++ PD++VYN +++A +K V + +L +S P+ T
Sbjct: 133 KKWGPIILICEWIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDT 192
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y L L++A+ + G + +A A M + G+ +A VY L G
Sbjct: 193 YAL------------LLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGN 240
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
A+ + ++K +P T+T LI +IF M+ C+PNI T
Sbjct: 241 NVKAVEIFHRMKR-DGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFT 299
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
A++ +R + KA+E+FE+ A GY +PD Y Y++++E+ + A
Sbjct: 300 ALVNALAREGLCEKAEEIFEQMQEA---GY----------EPDVYAYNALMESYSRAG-- 344
Query: 531 EYFEY----VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
F Y ++ M GC+ D+ + ++ RAG + F+ + G P
Sbjct: 345 --FPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITP 398
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 138/338 (40%), Gaps = 55/338 (16%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
YT L+ + GK + H A IF+ M + C P+I + ++ L + GL ++ ++ E
Sbjct: 262 TYTMLINVYGKESKSHMAQNIFDEMRTQRCK--PNICTFTALVNALAREGLCEKAEEIFE 319
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M++ EPD+ YNA++ + + G +F ++ G +P
Sbjct: 320 QMQEAG---------------YEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPD 364
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
A+Y + +++Y R L +A +EE M++ G+ T + L +
Sbjct: 365 RASYNIMVDAYGRAGLHEDAQAVFEE------------MKRIGITPTMKSHMLLLSAYSS 412
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDG-----GHIDDCISIFQHMKDHC 462
G E I H L+ TF + ++ G G ++D S Q K C
Sbjct: 413 AGNVAKC----EDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQ--KGPC 466
Query: 463 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
+I T N ++ VY R + +ELF+ N L+PD T++S +
Sbjct: 467 RADISTYNILINVYGRAGFVERMEELFQLLPAKN-------------LEPDVVTWTSRIG 513
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
A + ++ +++ M +GC D LL S
Sbjct: 514 AYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSACS 551
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 111/291 (38%), Gaps = 40/291 (13%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L P +VYNA ++ V +F ++++ G +P+ TY + L+
Sbjct: 221 LSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTM------------LIN 268
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+ +E K + A M + + L L G + A + E+++ + +
Sbjct: 269 VYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGY-E 327
Query: 430 PLEITFTGLIISSMDGGH---IDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
P + L+ S G + S+ QHM CEP+ + N M+ Y R + A+
Sbjct: 328 PDVYAYNALMESYSRAGFPYGAAEIFSLMQHMG--CEPDRASYNIMVDAYGRAGLHEDAQ 385
Query: 487 ELFEETTRA----------------NSSGYTFLSGD------GAPLKPDEYTYSSMLEAS 524
+FEE R +S+G D + LKPD + +SML
Sbjct: 386 AVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLY 445
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
Q+ E ++ M C+ D + + L+ RAG +E F L
Sbjct: 446 GRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLL 496
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 83/221 (37%), Gaps = 14/221 (6%)
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIG 467
N +W +L+ E I + +P I + L+ + D S + + ++ HC P
Sbjct: 132 NKKWGPIILICEWIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTED 191
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T +LK Y ++ + KA+ +F E + L P Y++ ++
Sbjct: 192 TYALLLKAYCKSGLLEKAEAVFAEMRKYG-------------LSPSAIVYNAYIDGLVKG 238
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
++ M GCQ + L+ + K H+ ++ FD + P+ F
Sbjct: 239 GNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTF 298
Query: 588 TEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
T ++ + EKA + M A + + L ES
Sbjct: 299 TALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMES 339
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 101/250 (40%), Gaps = 30/250 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y L+ +AG P+ A IF+LM + PD A+Y+ + G+ GL ++ + E
Sbjct: 331 YAYNALMESYSRAGFPYGAAEIFSLM-QHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 389
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M KRI + P + + +L+A + + Q+ KSGLKP
Sbjct: 390 EM-----KRIG----------ITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPD 434
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
+ Y R + GK+ + + ++ R + T Y + +
Sbjct: 435 TFVMNSMLNLYGR---------LGQFGKMEDLFSTMQKGPCRADIST----YNILINVYG 481
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 467
+ + M + ++ ++ +P +T+T I + C+ +F+ M D C P+ G
Sbjct: 482 RAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGG 541
Query: 468 TVNAMLKVYS 477
T +L S
Sbjct: 542 TAKVLLSACS 551
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 138/333 (41%), Gaps = 45/333 (13%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S F Y LL L KA + H+A IF+ M+ + ++ PD+ +Y ++ + + EL
Sbjct: 120 SCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSY---SILIDGFCKIDEL--- 173
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
R + ++++ D P++ YNA LN + + V++++ +G
Sbjct: 174 ---------GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCS 224
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P TY L+ F K ++A M RG A Y L L
Sbjct: 225 PDVITY------------STLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGL 272
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEP 464
C + +A + K+ R P ++T+T L+ + G I+ + +F M K H +P
Sbjct: 273 CKESKPDEAHELFRKMVE-RGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGH-DP 330
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
++ N +LK + R +A++LF+ KPD +++ M++
Sbjct: 331 DVVAYNCLLKGFFRAGKPGEARQLFQVMVSREC-------------KPDTVSHNIMIDGL 377
Query: 525 ATAHQWEYFEYVYKGMALS-GCQLDQTKHAWLL 556
+ A + + V++ M GC D + L+
Sbjct: 378 SKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 410
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 130/335 (38%), Gaps = 32/335 (9%)
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+ + + K G P AT+ + L+ + KI EA ++ M +
Sbjct: 71 LLETMIKRGYCPDMATHSM------------LINELCKADKIQEAQEFLQGMNRTISTRA 118
Query: 396 ASV--YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
+S Y L LC + A + + S R P ++++ LI +
Sbjct: 119 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEK 178
Query: 454 IFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
+++ M D +C PN+ T NA L R + A+ ++EE A S P
Sbjct: 179 LYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCS-------------P 225
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
D TYS+++ + A + + +++ M GC+ + + LL + K F
Sbjct: 226 DVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELF 285
Query: 573 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTE-LFES 628
++E G P + +T +L E+AV + + M + P + + F +
Sbjct: 286 RKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRA 345
Query: 629 NEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA 663
+ +R + +++ C + S I + LS+A
Sbjct: 346 GKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKA 380
>gi|299469655|emb|CBN76509.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 787
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 138/342 (40%), Gaps = 46/342 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
MN G+ L ++ GD+ QA+SVL + + K Y + G+
Sbjct: 345 MNALGVRPNTQTCLAAVRAAGDRDRGEQAVSVLRSMSEAGVAAEAK---CYAVTIKACGR 401
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
R AL + M E + P + Y + G ++ V L+ R+ P+ +
Sbjct: 402 GRRWARALELLREM-EKNGVEPIVMGYDACIAACGDGKQWEQAVALL---REMPTVGVT- 456
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL-RKSGLKPSAATYGLAMESY 359
P +V Y+ + AC S+QWK + +++ +++G+ P A Y M +
Sbjct: 457 -----------PTVVSYSHAIAACGQSYQWKPALELLREMPQEAGINPDAVCYNNCMTAL 505
Query: 360 RRCL-----------------------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
R L V ++A + G+ AVA +R M+ V
Sbjct: 506 GRGLQWEMALTLLREMPSVGLPIKAQSYTVAIKACGDAGEGKPAVALLREMQAELSVPPN 565
Query: 397 SVYYELACCLCNNG-RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
+ Y A C G +W+ A+ ++ ++ S+ S P + T+T I + + G ++ +S+
Sbjct: 566 VISYTAAIAACGKGDQWKQALELLREMASMGVS-PNDRTYTAAITACGNSGKWEEALSLL 624
Query: 456 QHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
+ M +PNI + A +K + +A ELF E A
Sbjct: 625 REMPTMGADPNIASYTATIKACGNGGQWERAVELFRELPSAG 666
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 146/367 (39%), Gaps = 47/367 (12%)
Query: 153 SEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSV 212
+EA+ V + A+ + +R M ++G+ + GD W QA+++
Sbjct: 387 AEAKCYAVTIKACGRGRRWARALELLREMEKNGVEPIVMGYDACIAACGDGKQWEQAVAL 446
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
L + + + S Y+ +A G++ + AL + M ++ + PD Y++
Sbjct: 447 LREMPTVGVTPTVVS---YSHAIAACGQSYQWKPALELLREMPQEAGINPDAVCYNNCMT 503
Query: 273 TLGQVGLLKELVKLIERMRQKPS------------------------KRIKNMHRKNWDP 308
LG+ GL E+ + +R+ PS + + +
Sbjct: 504 ALGR-GLQWEMALTL--LREMPSVGLPIKAQSYTVAIKACGDAGEGKPAVALLREMQAEL 560
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLV 368
+ P+++ Y A + AC QWK + +++ G+ P+ TY A +
Sbjct: 561 SVPPNVISYTAAIAACGKGDQWKQALELLREMASMGVSPNDRTYTAA------------I 608
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
A GK EA++ +R M G + Y N G+W+ A+ + ++ S +
Sbjct: 609 TACGNSGKWEEALSLLREMPTMGADPNIASYTATIKACGNGGQWERAVELFRELPSAGIT 668
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC--EPNIGTVNAMLKVYSRND--MFSK 484
++ + + + + G +D + + + M EPN+ T NA L S D + K
Sbjct: 669 ADVQ-AYNACVQACGNSGAVDQAVELLREMAPAAGLEPNVFTYNAALMACSCPDGGRWGK 727
Query: 485 AKELFEE 491
A EL EE
Sbjct: 728 ALELLEE 734
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 139/350 (39%), Gaps = 49/350 (14%)
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
AVT+ G + + +E +R+ M + +EP ++ Y+A + AC QW
Sbjct: 393 AVTIKACGRGRRWARALELLRE--------MEKNG----VEPIVMGYDACIAACGDGKQW 440
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
+ + +++ G+ P+ +Y A + A + + A+ +R M Q
Sbjct: 441 EQAVALLREMPTVGVTPTVVSYSHA------------IAACGQSYQWKPALELLREMPQE 488
Query: 391 GVVGTASVYYELACCLCNNGR---WQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGG 446
+ +V Y C+ GR W+ A+ ++ ++ S+ P++ ++T I + D G
Sbjct: 489 AGINPDAVCYNN--CMTALGRGLQWEMALTLLREMPSV--GLPIKAQSYTVAIKACGDAG 544
Query: 447 HIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+++ + M+ PN+ + A + + D + +A EL E S
Sbjct: 545 EGKPAVALLREMQAELSVPPNVISYTAAIAACGKGDQWKQALELLREMASMGVS------ 598
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
P++ TY++ + A + +WE + + M G + + + G+
Sbjct: 599 -------PNDRTYTAAITACGNSGKWEEALSLLREMPTMGADPNIASYTATIKACGNGGQ 651
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAMAYA 613
F L AG I + +QA S ++AV L+ MA A
Sbjct: 652 WERAVELFRELPSAG-ITADVQAYNACVQACGNSGAVDQAVELLREMAPA 700
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 134/347 (38%), Gaps = 45/347 (12%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES------YRR--CLL 364
D V+ NAVLN +W+ V V +Q+R++GL P A TY A+++ +RR LL
Sbjct: 213 DTVMCNAVLNTFAADGRWQVVLEVMRQMREAGLTPDALTYTNAIKACGKGREWRRSVALL 272
Query: 365 KVL---------------VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
K + + A G EAV +R M+ G+ Y
Sbjct: 273 KEMSAHGVELNSIHYVCAMTACKISGMGAEAVGLLREMQAAGIEPNVICYNTAIAACGTG 332
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV 469
G+ + A+ ++E++ +L +P T + ++ D + +S+ + M +
Sbjct: 333 GQSEVAVDLLEEMNAL-GVRPNTQTCLAAVRAAGDRDRGEQAVSVLRSMSEAGVAAEAKC 391
Query: 470 NAM-LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
A+ +K R +++A EL E + ++P Y + + A
Sbjct: 392 YAVTIKACGRGRRWARALELLREMEKNG-------------VEPIVMGYDACIAACGDGK 438
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL----EAGEIPHP 584
QWE + + M G ++ + + G+ + + A + L EAG P
Sbjct: 439 QWEQAVALLREMPTVGVTPTVVSYSHAI---AACGQSYQWKPALELLREMPQEAGINPDA 495
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNED 631
+ + + +E A+ L+ M I + +T ++ D
Sbjct: 496 VCYNNCMTALGRGLQWEMALTLLREMPSVGLPIKAQSYTVAIKACGD 542
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 116/271 (42%), Gaps = 33/271 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ ++G W + ++ ++ + ++ Y+ L++ L + GR EA+ + +M+
Sbjct: 293 LLRAFLNQGKWDEGEKLVAEMF---SRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 349
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E L PD +Y + L + G L + +++ M PD+V
Sbjct: 350 EK-ELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCL---------------PDIV 393
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN +L A + +F +LR G P+ ++Y ++ A W G
Sbjct: 394 NYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY------------NTMISALWSCG 441
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ A+ V M +G+ Y L CLC +G ++A+ +++ ++ +P I++
Sbjct: 442 DRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ-SGFRPTVISY 500
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDH-CEPN 465
+++ IDD I +F M + C PN
Sbjct: 501 NIVLLGLCKVRRIDDAIGMFAEMIEKGCRPN 531
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/490 (19%), Positives = 186/490 (37%), Gaps = 52/490 (10%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
F E ++KLL G + +++ L+ L +K + TKL+ +A
Sbjct: 76 FRETHLMKLLNRSCKAGKFNESLYFLEC---LVNKGYTPDVILCTKLIKGFFNFKNIEKA 132
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWD 307
R+ ++ + + PD+ AY++V +V ++ +++ RM+ +
Sbjct: 133 SRVMEIL--ESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARG------------- 177
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
PD+V YN ++ + + V QL P+ TY +L
Sbjct: 178 --FLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITY------------TIL 223
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
+ A EG INEA+ + M RG++ Y + +C G + A ++ + S +
Sbjct: 224 IEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTS-KG 282
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 486
+P I++ L+ + ++ G D+ + M CEPN T + ++ R +A
Sbjct: 283 CEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 342
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
+ + L PD Y+Y ++ A + + + M +GC
Sbjct: 343 SVLKVMIEKE-------------LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCL 389
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
D + +L + G + F+ L G P+ + M+ + +A+ +
Sbjct: 390 PDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGM 449
Query: 607 INAMAYAPFHITERQWTELFESNEDRISRDKL-EKLLNALCNCNAASSEITVSNLSRALH 665
+ AM E + L + RD L E+ + L + + TV + + L
Sbjct: 450 VPAMISKGIDPDEITYNSLISC----LCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLL 505
Query: 666 ALCRSEKERD 675
LC+ + D
Sbjct: 506 GLCKVRRIDD 515
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 155/414 (37%), Gaps = 49/414 (11%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K + L Y ++ L + AL + + +L D N P + Y + G
Sbjct: 173 MKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLD-NCMPTVITYTILIEATIVEG 231
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ E +KL+E M + L PD+ YNA++ + +
Sbjct: 232 GINEAMKLLEEMLARG---------------LLPDMYTYNAIIRGMCKEGMVERAAELIT 276
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
L G +P +Y +L+RAF +GK +E V M RG
Sbjct: 277 SLTSKGCEPDVISY------------NILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVT 324
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
Y L LC GR +A+ V+ K+ + P ++ LI + G +D I I +M
Sbjct: 325 YSILISSLCRFGRIDEAISVL-KVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 383
Query: 459 -KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
+ C P+I N +L +N ++A E+F + L G G P P+ +Y
Sbjct: 384 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNK-----------LRGMGCP--PNVSSY 430
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDS 574
++M+ A + + M G D+ + L+ R G L+E A D
Sbjct: 431 NTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDG---LVEEAIGLLDD 487
Query: 575 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
+ ++G P + + +L+ + A+ + M E + L E
Sbjct: 488 MEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEG 541
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 170/445 (38%), Gaps = 99/445 (22%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS-- 295
L KAGR +AL +LE PD Y+ + L + L +E + +++RMR
Sbjct: 250 LCKAGRCGDALS----LLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIP 305
Query: 296 ---------------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
KRI +M P+ ++N++++A S + +
Sbjct: 306 NVVTYRILLSGCLGKGQLGRCKRILSMMMTEG---CYPNREMFNSLVHAYCKSRDYSYAY 362
Query: 335 WVFKQLRKSGLKPSAATYG-------------------LAMESYRRCL-LKVLV------ 368
+FK++ K G +P Y LA ++Y L L V++
Sbjct: 363 KLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVS 422
Query: 369 ---RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
R GK ++A + M +G V S Y ++ LC+ + + A L+ E++K
Sbjct: 423 NFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKK- 481
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 484
P T+T LI S G I + F M +D+C PN+ T +++ Y +
Sbjct: 482 NGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFD 541
Query: 485 AKELFE----ETTRANSSGYT----------------------------------FLSGD 506
A +LFE E ++ N YT F D
Sbjct: 542 ANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDD 601
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
P+ TY ++++ A++ E + M+++GC+ +Q + L+ + GK
Sbjct: 602 NDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLE 661
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEML 591
+ F + E G P+ ++ ++
Sbjct: 662 NAQEVFVKMSERGYCPNLYTYSSLI 686
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 119/297 (40%), Gaps = 43/297 (14%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD Y+ V+ + + + F +F++++K+G+ PS TY +L+ +F
Sbjct: 451 PDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTY------------TILIDSF 498
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ G I +A M + Y L + DA + E + L SKP
Sbjct: 499 CKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMML-LEGSKPN 557
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMK----------------DHCE-PNIGTVNAMLK 474
+T+T LI G ID I+ M+ + CE PNI T A++
Sbjct: 558 VVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVD 617
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
+ + +A EL + +S +G +P++ Y ++++ + E +
Sbjct: 618 GLCKANRVEEAHELLDT-----------MSVNGC--EPNQIVYDALIDGFCKTGKLENAQ 664
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
V+ M+ G + ++ L+ + + L+ +LE P+ + +T+M+
Sbjct: 665 EVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMI 721
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 137/348 (39%), Gaps = 54/348 (15%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR---------------- 361
N ++ C + W +L+ G K S TY ++ + R
Sbjct: 174 NFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSN 233
Query: 362 -------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
C L + + G+ +A++ +E+ V Y + LC +Q+
Sbjct: 234 SGFRMDGCTLGCFAYSLCKAGRCGDALSL---LEKEEFVPDTVFYNRMVSGLCEASLFQE 290
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAML 473
AM ++++++S+ P +T+ L+ + G + C I M + C PN N+++
Sbjct: 291 AMDILDRMRSI-SCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLV 349
Query: 474 KVYSRNDMFSKAKELFEETTRANSS-GYTFLS-GDGAPLKPDEYTYSSMLEASATAHQWE 531
Y ++ +S A +LF++ + GY + G+ +E S +LE + A
Sbjct: 350 HAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKA---- 405
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK-----CHLLEHAF---DS--------L 575
Y E + G+ L+ +++ + A L A + K C ++ F DS L
Sbjct: 406 YSEMLDLGVVLN--KVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFL 463
Query: 576 LEAGEIPHP-LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQW 622
+A ++ L F EM IV S Y + LI++ A R W
Sbjct: 464 CDASKVEKAFLLFEEMKKNGIVPSVYTYTI-LIDSFCKAGLIQQARNW 510
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 116/278 (41%), Gaps = 44/278 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLML-----EDCNLY----------PDIAAYHSVAVTL 274
YT L+ KAG+ +A +I+ M D ++Y P+I Y ++ L
Sbjct: 560 TYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGL 619
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ ++E +L++ M EP+ +VY+A+++ + + +
Sbjct: 620 CKANRVEEAHELLDTMSVNGC---------------EPNQIVYDALIDGFCKTGKLENAQ 664
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
VF ++ + G P+ TY L+ + ++E +++ + + M +
Sbjct: 665 EVFVKMSERGYCPNLYTY------------SSLINSLFKEKRLDLVLKVLSKMLENSCTP 712
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
+Y ++ LC G+ ++A ++ K++ + P IT+T +I G I+ C+ +
Sbjct: 713 NVVIYTDMIDGLCKVGKTEEAYRLMLKMEEV-GCYPNVITYTAMIDGFGKIGKIEQCLEL 771
Query: 455 FQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
++ M C PN T ++ + +A L +E
Sbjct: 772 YRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDE 809
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 148/408 (36%), Gaps = 62/408 (15%)
Query: 173 KNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYT 232
K ++ + M G + + K++ L D +A + + +K + S + YT
Sbjct: 436 KAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEE---MKKNGIVPSVYTYT 492
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
L+ KAG +A F+ ML D N P++ Y S+ + + + KL E M
Sbjct: 493 ILIDSFCKAGLIQQARNWFDEMLRD-NCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLL 551
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLN----------ACVPSHQWKG------VFWV 336
+ SK P++V Y A+++ AC + +G +
Sbjct: 552 EGSK---------------PNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMY 596
Query: 337 FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
FK P+ TYG LV + ++ EA + M G
Sbjct: 597 FKLDDNDCETPNIITYG------------ALVDGLCKANRVEEAHELLDTMSVNGCEPNQ 644
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
VY L C G+ ++A V K+ S R P T++ LI S +D + +
Sbjct: 645 IVYDALIDGFCKTGKLENAQEVFVKM-SERGYCPNLYTYSSLINSLFKEKRLDLVLKVLS 703
Query: 457 HM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
M ++ C PN+ M+ + K +E + + G P+
Sbjct: 704 KMLENSCTPNVVIYTDMIDGLCK---VGKTEEAYRLMLKMEEVG----------CYPNVI 750
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
TY++M++ + E +Y+ M GC + + L+ G
Sbjct: 751 TYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTG 798
>gi|302775192|ref|XP_002971013.1| hypothetical protein SELMODRAFT_63047 [Selaginella moellendorffii]
gi|300160995|gb|EFJ27611.1| hypothetical protein SELMODRAFT_63047 [Selaginella moellendorffii]
Length = 413
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 151/385 (39%), Gaps = 45/385 (11%)
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
L G R A VL+W L D++ Y L+ L K G +A+ IF M D
Sbjct: 2 LSRAGRRRTAFKVLEW---LSDRKRGIHANAYNSLITGLMKDGDEADAIAIFERMKHD-R 57
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
+ P + Y +V L V + ++ + S L+PD+ +YN
Sbjct: 58 VAPTLYTYTAVMRALSHVQGWESAHRMFSELVVHGS--------------LKPDVAMYNT 103
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
+L A H+ + V +++++K G + TY CLL V F + + +
Sbjct: 104 MLAAYGRGHKLERVLQTWERMQKEGCVENVGTY---------CLL---VSTFVQTNQADL 151
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
A+ A M +G+ T +Y L C GRW A+ +++ KP +T+ L+
Sbjct: 152 ALDAYARMNSQGLKATDGIYRGLVCVCATQGRWLVALTFFKEMLE-SGCKPTIVTYNVLM 210
Query: 440 ISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
+ G + + + MK P+ TVNA+L F +A F SS
Sbjct: 211 RALGKAGKWEIVLDLLPRMKASGVAPDFYTVNAVLNGLIAAREFDRAMLFFHSV---KSS 267
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
G +K D Y+ +L A + WE + + M +G ++ LLV
Sbjct: 268 G----------MKLDREVYNVILVACQKSKNWEAALSLVQEMEQTGIAPNEVTFGPLLVA 317
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPH 583
A + + ++ + + +P+
Sbjct: 318 CENAKQVEVALRLYEHMKQRRCVPN 342
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/398 (18%), Positives = 170/398 (42%), Gaps = 72/398 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G A+++ + +K R + + YT ++ L A R+F+ ++
Sbjct: 33 LITGLMKDGDEADAIAIFE---RMKHDRVAPTLYTYTAVMRALSHVQGWESAHRMFSELV 89
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR-----KNWDPVL 310
+L PD+A Y+++ G+ L+ +++ ERM+++ ++N+ +
Sbjct: 90 VHGSLKPDVAMYNTMLAAYGRGHKLERVLQTWERMQKEGC--VENVGTYCLLVSTFVQTN 147
Query: 311 EPDLV-----------------VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ DL +Y ++ C +W FK++ +SG KP+ TY
Sbjct: 148 QADLALDAYARMNSQGLKATDGIYRGLVCVCATQGRWLVALTFFKEMLESGCKPTIVTYN 207
Query: 354 LAMESYRRC-----LLKVLVRA--------FWEEGKINEAVAAVRNMEQRGVVGTASV-- 398
+ M + + +L +L R F+ + + A R + R ++ SV
Sbjct: 208 VLMRALGKAGKWEIVLDLLPRMKASGVAPDFYTVNAVLNGLIAAREFD-RAMLFFHSVKS 266
Query: 399 --------YYELACCLCNNGR-WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
Y + C + W+ A+ +V++++ + P E+TF L+++ + ++
Sbjct: 267 SGMKLDREVYNVILVACQKSKNWEAALSLVQEMEQTGIA-PNEVTFGPLLVACENAKQVE 325
Query: 450 DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
+ +++HMK C PN V ++++ + M+ +A+ ++ ++
Sbjct: 326 VALRLYEHMKQRRCVPNTHVVASLIRACGKELMWQQARNIYRVSS--------------- 370
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
P+ Y Y+++++A + ++ + V + M GCQ
Sbjct: 371 ---PNVYVYNALIDAYCRSQKYHLAKKVDRRMIEEGCQ 405
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 163/397 (41%), Gaps = 49/397 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D L + K + + M + GLM L+ G +G A+ V++ +
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K + ++ Y +L+ K+ H+A+ + N MLE + PD+ Y+S+ + G
Sbjct: 423 KLSPNTRT---YNELIKGYCKSNV-HKAMGVLNKMLER-KVLPDVVTYNSLIDGQCRSGN 477
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+L+ M D L PD Y +++++ S + + +F
Sbjct: 478 FDSAYRLLSLMN---------------DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
L + G+ P+ Y L+ + + GK++EA + M + + + +
Sbjct: 523 LEQKGVNPNVVMY------------TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 458
L LC +G+ ++A L+ EK+ + +P T T LI + G D S FQ M
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKI-GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 459 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
+P+ T ++ Y R A+++ + R N + PD +TYS
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM-RENG------------VSPDLFTYS 676
Query: 519 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
S+++ Q + V K M +GC+ Q H +L
Sbjct: 677 SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ--HTFL 711
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/449 (20%), Positives = 185/449 (41%), Gaps = 73/449 (16%)
Query: 193 MLKLLKGLGDKGSWRQAMSVLDWVYGL-KDKR-DLKSRFV---YTKLLAILGKAGRPHEA 247
M+K +GD A+ VLD + KD+R +LK + + Y LL L + G E
Sbjct: 149 MIKSCDSVGD------ALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEM 202
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWD 307
+++ MLED + P+I Y+ + ++G ++E + + ++ +
Sbjct: 203 KQVYMEMLED-KVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG------------- 248
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-----GL-------- 354
L+PD Y +++ F VF ++ G + + Y GL
Sbjct: 249 --LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 355 AMESYRR-----CL-----LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
AM+ + + C VL+++ + +EA+ V+ ME+ G+ Y L
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 405 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 463
LC+ +++ A ++ ++ + P IT+ LI G I+D + + + M+
Sbjct: 367 SLCSQCKFEKARELLGQMLE-KGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 464 PNIGTVNAMLKVYSRNDMFSKA--------KELFEETTRANS------------SGYTFL 503
PN T N ++K Y ++++ +++ + NS S Y L
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 504 S-GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
S + L PD++TY+SM+++ + + E ++ + G + + L+ +A
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 563 GKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
GK + +L +P+ L F ++
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 108/265 (40%), Gaps = 32/265 (12%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
++ + +MN GL+ + ++ L +A + D L+ K + +YT L
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD---SLEQKGVNPNVVMYTAL 538
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ KAG+ EA + ML N P+ ++++ L G LKE L E+M
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSK-NCLPNSLTFNALIHGLCADGKLKEATLLEEKMV--- 594
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ P + D ++ + +L H + F+Q+ SG KP A TY
Sbjct: 595 --------KIGLQPTVSTDTILIHRLLKDGDFDHAYSR----FQQMLSSGTKPDAHTYTT 642
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
+++Y R EG++ +A + M + GV Y L + G+
Sbjct: 643 FIQTYCR------------EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNF 690
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLI 439
A V+++++ +P + TF LI
Sbjct: 691 AFDVLKRMRD-TGCEPSQHTFLSLI 714
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 107/534 (20%), Positives = 222/534 (41%), Gaps = 72/534 (13%)
Query: 124 LNWVLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMN 182
LN +++ LG F+ V K ++ + L+ L + K+ F +
Sbjct: 48 LNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVV 107
Query: 183 QSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAG 242
G + LL GL G R A+ +L + +D+ + +Y ++ L K
Sbjct: 108 AQGFQMDQVSYATLLNGLCKIGETRSALKLLRMI---EDRSTRPNVVMYNTIIDGLCKDK 164
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
+EA +++ M + ++P++ Y ++ G L E L+ M +KN++
Sbjct: 165 LVNEAYDLYSEM-DARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMI------LKNIN 217
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
P++ Y +++A + K + + K G+KP+ +Y M+ Y C
Sbjct: 218 ---------PNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGY--C 266
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
L+ G++ A M Q+GV Y + LC + R +AM ++ ++
Sbjct: 267 LI----------GEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREV 316
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDM 481
++ P +T++ LI G I + + + M +P ++ T ++L +N
Sbjct: 317 LH-KNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQN 375
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
KA LF + ++P++YTY+++++ + + + +++ +
Sbjct: 376 LDKATALFMKMKERG-------------IQPNKYTYTALIDGLCKGGRHKNAQKLFQHLL 422
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQS 598
+ GC+++ + ++ + G +L+ A + E G IP + F E++I+++ +
Sbjct: 423 VKGCRINVWTYNVMISGLCKEG---MLDEALAMKSKMEENGCIPDAVTF-EIIIRSLFEK 478
Query: 599 NY-EKAVALINAMA------YAPFHITERQWTELFESNEDRISRDKLEKLLNAL 645
+ +KA L++ M + FH ER E DK EKLL+ +
Sbjct: 479 DQNDKAEKLLHEMIAKDLLRFRDFH-GERSPNE----------NDKAEKLLHEM 521
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 169/438 (38%), Gaps = 44/438 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D L +R M K M + G++ LL L ++G A +L +
Sbjct: 219 VLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLL---CSM 275
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+ YT L+ L KAGR EA F L L+D + Y + L Q G
Sbjct: 276 KENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFEL-LQDGGFTLGLIGYSCLIDGLFQAGR 334
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
E + M K + PD+ +Y ++ + + K F + +
Sbjct: 335 FDEGLSYYTEMLGKS---------------ISPDITLYTILIRRFAEAGRTKDAFLLLDE 379
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
++ G P Y L++A ++ G I+ A + + M Q VV ++ +
Sbjct: 380 MKDKGFVPDTFCY------------NTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTH 427
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
+ C LC G AM V +++ P +T+ LI G +++ +F M+
Sbjct: 428 NIMICGLCKKGLIDKAMQVFDEMGE-HGCHPTVMTYNALIDGLYRAGMLEEARMLFHKME 486
Query: 460 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG-----YTFLSGD-GAPLKPD 513
P++ L++ + + L + SG Y L G + + PD
Sbjct: 487 MGNNPSL-----FLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPD 541
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
TY++++ A + ++K + L G D+ + L+ RA + + F
Sbjct: 542 VVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQ 601
Query: 574 SLLEAGEIPH-PLFFTEM 590
++L +G P P++ T M
Sbjct: 602 NILRSGGFPSLPIYNTMM 619
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 161/408 (39%), Gaps = 60/408 (14%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLED--CNLYPDIAAYHSVAVTLGQVGL 279
KR L+S +Y++ +++L A P +A+ +F+ + + L AA+ ++ + G
Sbjct: 102 KRRLRSPLLYSRAVSVL-LASEP-DAVAMFDALADARAAGLPAPSAAFRALVLAHSSAGR 159
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+E V+ RM ++D P VYNAV V ++ +
Sbjct: 160 HQEAVEAFSRM-------------GDFD--CRPTAFVYNAVFQVLVDRGVILLALALYNR 204
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ SG P++ TY VL+ + G +A+ M +RG+V +Y
Sbjct: 205 MVSSGCLPNSTTY------------IVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIY 252
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
L LCN GR +DA ++ +K P E+T+T + G +D+ F+ ++
Sbjct: 253 TVLLSSLCNEGRIEDAGRLLCSMKE-NGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQ 311
Query: 460 D--HCEPNIG---TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL---------SG 505
D IG ++ + + ++ S E+ ++ + + YT L +
Sbjct: 312 DGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTK 371
Query: 506 DGAPL---------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
D L PD + Y+++L+A + + + M + LD T H ++
Sbjct: 372 DAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMI 431
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
+ G FD + E G HP T M A++ Y +
Sbjct: 432 CGLCKKGLIDKAMQVFDEMGEHG--CHP---TVMTYNALIDGLYRAGM 474
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 127/314 (40%), Gaps = 52/314 (16%)
Query: 139 FAKNVEWHPEKRWRSEAEAIR---VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLK 195
F + + ++ E +S + I +L+ R +E T + + M G +
Sbjct: 335 FDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNT 394
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLK L D G+ +A S++ + L++ L S + ++ L K G +A+++F+ M
Sbjct: 395 LLKALFDVGNIDRAQSLMSEM--LQNNVVLDST-THNIMICGLCKKGLIDKAMQVFDEMG 451
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR--QKPS---------KRIKNMH-- 302
E +P + Y+++ L + G+L+E L +M PS ++++
Sbjct: 452 EH-GCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESL 510
Query: 303 RKNWDPVLE--------------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
RK D + + PD+V YN ++N + G +FK+L+
Sbjct: 511 RKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQL 570
Query: 343 SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
G+ P TYG L+ W + N+A +N+ + G + +Y +
Sbjct: 571 KGISPDEITYG------------TLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTM 618
Query: 403 ACCLCNNGRWQDAM 416
LC + A+
Sbjct: 619 MRSLCRMKKLSQAI 632
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 167/432 (38%), Gaps = 64/432 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K K + +A +L+W++G D+ F Y L+ L K G +AL++F+ M
Sbjct: 130 LIKISCRKKQFDKAKELLNWMWGQGFSPDV---FSYGTLINSLAKNGYMSDALKLFDEMP 186
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN---------- 305
E + PD+A Y+ + + G + ++ ER+ + PS N+ N
Sbjct: 187 ER-GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSV-YPNIPSYNVMINGLCKCG 244
Query: 306 -WDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+D E DL Y+ +++ S G V+K++ ++G+ P Y
Sbjct: 245 KFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYN 304
Query: 354 LAMESYRR------CL----------------LKVLVRAFWEEGKINEAVAAVRNMEQRG 391
+ Y R CL +L+R +E K++EA++ + ++
Sbjct: 305 TMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKD 364
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
+ Y L LC NG A+ ++E+ ++ R ++ +I G +D+
Sbjct: 365 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD-TFAYSSMINGLCREGRLDEV 423
Query: 452 ISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 510
+ M H C+PN NA++ + R A F
Sbjct: 424 AGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCF------------ 471
Query: 511 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 570
P TY++++ + A ++ + K M G + + ++ L+ + K + +
Sbjct: 472 -PTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALN 530
Query: 571 AFDSLLEAGEIP 582
+ LE G P
Sbjct: 531 LWCQALEKGFKP 542
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 129/339 (38%), Gaps = 42/339 (12%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV--KLIERM 290
+++ +L PH AL IF+ + +H + LK L KL+
Sbjct: 12 RVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHI---------LKRLFDPKLVAHA 62
Query: 291 RQK---PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
K P + + R + +P + YN++LNA + S++W F GL P
Sbjct: 63 YAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSP 122
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ TY +L++ + + ++A + M +G Y L L
Sbjct: 123 NLQTY------------NILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLA 170
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPN 465
NG DA+ + +++ R P + LI G I + I++ + PN
Sbjct: 171 KNGYMSDALKLFDEMPE-RGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPN 229
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
I + N M+ + F ++ E++ + N G D YTYS+++
Sbjct: 230 IPSYNVMINGLCKCGKFDESFEIWHRMKK-NERG------------QDLYTYSTLIHGLC 276
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+ + VYK MA +G D + +L RAG+
Sbjct: 277 GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 315
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 82/201 (40%), Gaps = 37/201 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-N 252
++ GL +G + VLD + +G K + +V ++ +A + +ALR F N
Sbjct: 410 MINGLCREGRLDEVAGVLDQMTKHGCK-----PNPYVCNAVINGFVRASKLEDALRFFGN 464
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
++ + C +P + Y+++ L + E L++ M QK W +P
Sbjct: 465 MVSKGC--FPTVVTYNTLINGLSKAERFSEAYALVKEMLQK-----------GW----KP 507
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
+++ Y+ ++N + ++ Q + G KP + +++
Sbjct: 508 NMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMH------------NIIIHGLC 555
Query: 373 EEGKINEAVAAVRNMEQRGVV 393
GK+ +A+ M+QR V
Sbjct: 556 SSGKVEDALQLYSEMKQRNCV 576
>gi|326513138|dbj|BAK06809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 182/433 (42%), Gaps = 33/433 (7%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L L RE++ K ++ M + G M LL L G QA V + +
Sbjct: 192 ILQAHLRSREVS-KGFEVYEEMRRKGYMLDIFGYNMLLDALAKSGMVDQAYQVFE---DM 247
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVG 278
K K + YT L+ + G+AG+ + L F+ M+ + C L ++ AY+++ LG+
Sbjct: 248 KQKYCEPDAYTYTILIRMSGRAGKASKFLSFFDEMVSKGCAL--NLIAYNTLIEALGKNK 305
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVL-EPDLVVYNAVLNACVPSHQWKGVF-WV 336
++ +++ ++ +M + + + + D + E L N VL+ C + K ++ ++
Sbjct: 306 MVDKVIFVLSKMIEGGCQPNQFTYSITLDILAKEGQLHRLNEVLDIC-DRYMNKSIYSYL 364
Query: 337 FKQLRKSGLKPSAATYGLAM----ESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
K L KSG A M E+ R ++ GK EA+ + M ++GV
Sbjct: 365 VKSLSKSGHVSEAHNVFCQMWNSYETGDRDAFVSMLEVLCNSGKTLEAIDLLHMMPEKGV 424
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDD 450
+Y + L G+ + + ++ + P T+ +I S G +D
Sbjct: 425 ATDVGMYNMVFSAL---GKLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRVGLVDK 481
Query: 451 CISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
+F+ M C+P++ T N+++ +N +A LF+E GY
Sbjct: 482 ASGLFEDMNASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEM---QEKGY--------- 529
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
PD +TYS ++E +++ + ++ M GC + + LL R GK
Sbjct: 530 -GPDVFTYSILIECFGKSNKVDMACNLFLDMIAEGCIPNVVTYNILLDCLERHGKTAEAH 588
Query: 570 HAFDSLLEAGEIP 582
++++ + G P
Sbjct: 589 KHYETMKQQGLTP 601
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/391 (19%), Positives = 148/391 (37%), Gaps = 65/391 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y LL L K+G +A ++F M + C PD Y + G+ G + +
Sbjct: 222 FGYNMLLDALAKSGMVDQAYQVFEDMKQKYCE--PDAYTYTILIRMSGRAGKASKFLSFF 279
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ M K +L+ YN ++ A + V +V ++ + G +P
Sbjct: 280 DEMVSKGCAL---------------NLIAYNTLIEALGKNKMVDKVIFVLSKMIEGGCQP 324
Query: 348 SAATYGLAME--------------------SYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ TY + ++ + + LV++ + G ++EA M
Sbjct: 325 NQFTYSITLDILAKEGQLHRLNEVLDICDRYMNKSIYSYLVKSLSKSGHVSEAHNVFCQM 384
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP-----LEITFTGLIISS 442
G + + LCN+G+ +A+ L H P ++ ++ S+
Sbjct: 385 WNSYETGDRDAFVSMLEVLCNSGKTLEAI-------DLLHMMPEKGVATDVGMYNMVFSA 437
Query: 443 MDG-GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
+ + S+F MK + P++ T N M+ Y R + KA LFE+
Sbjct: 438 LGKLKQVSFITSLFDKMKANGIAPDLFTYNIMISSYGRVGLVDKASGLFEDM-------- 489
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
+ + KPD TY+S++ + ++K M G D ++ L+
Sbjct: 490 -----NASSCKPDVITYNSLINCLGKNGDLDEAHMLFKEMQEKGYGPDVFTYSILIECFG 544
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
++ K + + F ++ G IP+ + + +L
Sbjct: 545 KSNKVDMACNLFLDMIAEGCIPNVVTYNILL 575
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 182/452 (40%), Gaps = 56/452 (12%)
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
RS+ +L+D L + + + + +M Q G + L+KGL K +A
Sbjct: 188 RSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATR 247
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY-----PDIAA 266
+ + L + D Y L+ L + G + AL++ ML D Y P + +
Sbjct: 248 LFMSMQKLGCRPD---AIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLIS 304
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y S+ + GL K+ R + + K M + + PD++ Y +++
Sbjct: 305 Y-SIIID----GLCKD------RREDEARELFKEMKAQG----IMPDVISYTTLIHGFCL 349
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRN 386
S +W+ +F ++ G++P T VL+ ++GK+ EA +
Sbjct: 350 SGKWEKAKCLFNEMLDVGIQPDVTTS------------SVLIDMLCKKGKVIEANKLLEV 397
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
+ QRG + L LC R A + K++ L P +T L+ G
Sbjct: 398 VIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKL-GCMPNVVTCATLMKGLCQSG 456
Query: 447 HIDDCISIFQHMKD-------HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 499
+I + + ++M +C+PN + + ++ + +A+ELF+E
Sbjct: 457 NIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALG--- 513
Query: 500 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 559
+ PD +Y+S++ + +W+ +Y++ M G Q D T + L+
Sbjct: 514 ----------VIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML 563
Query: 560 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ GK + +++ G IP+ + +T ++
Sbjct: 564 CKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 595
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 105/526 (19%), Positives = 211/526 (40%), Gaps = 66/526 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D + + + + +M Q G + L+KGL K +A + + L
Sbjct: 15 VLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKL 74
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY-----PDIAAYHSVAVTL 274
+ D Y L+ L + G+ + AL + ML D + Y P + +Y S+ +
Sbjct: 75 GCRPD---AIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY-SIIID- 129
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
GL K+ R + + K M + + PD++ Y ++++ S +W+
Sbjct: 130 ---GLCKD------RREDEARELFKEMKAQG----MMPDVISYTSLIHGFCRSGKWEKAK 176
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
+F ++ G++ T + L+ +EGK+ EA + M QRG +
Sbjct: 177 CLFNEMLDVGIRSDVTTSSM------------LIDILCKEGKVIEANELLEVMIQRGCIL 224
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
Y L LC R +A + ++ L +P I + L+ G+I+ + +
Sbjct: 225 DIVTYSTLIKGLCMKHRISEATRLFMSMQKL-GCRPDAIAYGTLMKGLCQTGNINTALQL 283
Query: 455 FQHMKD-------HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
Q M + C+P + + + ++ ++ +A+ELF+E + G
Sbjct: 284 HQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKE-----------MKAQG 332
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
+ PD +Y++++ + +WE + ++ M G Q D T + L+ + GK
Sbjct: 333 --IMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIE 390
Query: 568 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL---INAMAYAPFHITERQWTE 624
+ +++ G IP + T ++ ++ KA L + + P +T +
Sbjct: 391 ANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMK 450
Query: 625 -LFESNEDRISRDKLEKLLNAL------CNCNAASSEITVSNLSRA 663
L +S +I+ + + +L+ C NA S I + L +
Sbjct: 451 GLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKC 496
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/417 (19%), Positives = 170/417 (40%), Gaps = 56/417 (13%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D L ++ + K + ++ Q G + L+KGL K +A + +
Sbjct: 377 VLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLF---LKM 433
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY-----PDIAAYHSVAVTL 274
+ + + L+ L ++G AL + ML D + Y P+ +Y + L
Sbjct: 434 QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGL 493
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G E +L + M+ + PD++ Y ++++ S +WK
Sbjct: 494 CKCGREDEARELFKEMKALG---------------VIPDVISYTSLIHGFCRSGKWKDAK 538
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
++F ++ G++P T+ VL+ +EGK+ EA + M QRG +
Sbjct: 539 YLFNEMVDIGVQPDVTTF------------SVLIDMLCKEGKVIEANELLEVMIQRGCIP 586
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
Y L LC N R +A + K++ L P +T+ L+ G+I + +
Sbjct: 587 NTVTYTTLVKGLCMNDRISEATQLFMKMQKL-GCLPDVVTYGTLMKGLCQTGNIKTALEL 645
Query: 455 FQHM-------KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
+ M + +P++ + + ++ ++ +A+ELF+E
Sbjct: 646 HKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALG----------- 694
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+ P+ +Y+S++ + + E ++++ M G QL+ ++ ++ + G+
Sbjct: 695 --VIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQ 749
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 113/274 (41%), Gaps = 33/274 (12%)
Query: 344 GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
G++P T G VL+ F +EGK+ EA + M QRG + Y L
Sbjct: 5 GIQPDVTTSG------------VLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLI 52
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD--- 460
LC R +A + +K L +P I + L+ G I+ + + Q M +
Sbjct: 53 KGLCMKHRISEATQLFMSMKKL-GCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTS 111
Query: 461 ----HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
C+P + + + ++ ++ +A+ELF+E + G + PD +
Sbjct: 112 QYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKE-----------MKAQG--MMPDVIS 158
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
Y+S++ + +WE + ++ M G + D T + L+ + GK + ++
Sbjct: 159 YTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMI 218
Query: 577 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ G I + ++ ++ ++ +A L +M
Sbjct: 219 QRGCILDIVTYSTLIKGLCMKHRISEATRLFMSM 252
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/457 (21%), Positives = 172/457 (37%), Gaps = 82/457 (17%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+ LL+ LG+AG +F M E ++ PDI Y + L + GL+ + +K+++R
Sbjct: 133 TFNSLLSALGRAGNLRGMTELFTSMRE-ASVKPDIVTYGILLNRLCKAGLVGDALKVLDR 191
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKS-GLKP 347
M S D+V+ N V++ C + +V +++R+ G P
Sbjct: 192 MSSPGSDVCA-------------DIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAP 238
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ TY CL R G I+ A V ME+ GV + LC
Sbjct: 239 NTVTY--------NCLADACCRV----GDIDMACQIVERMEKEGVTPNVITMNTIVGGLC 286
Query: 408 NNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-- 464
GR A+ EK + ++ +T++ L+ + + ++ + +F M D P
Sbjct: 287 RVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPD 346
Query: 465 ---------------------NIGT-------------VNAMLKVYSRNDMFSKAKELFE 490
NI N ++ + R +A +LFE
Sbjct: 347 AVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFE 406
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E GA L+PD YTY+++L A + + + M GCQ
Sbjct: 407 EM-------------KGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVV 453
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L+ +AGK F S+ EA P+ + + ++ + A+ L + M
Sbjct: 454 TFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEM 513
Query: 611 --AYAPFHITERQWTELFESNEDRISRDKLEKLLNAL 645
P ++T + L + +D+ +K +L++ +
Sbjct: 514 RENNVPANVT--TYNALLKGLQDKNMPEKAFELMDQM 548
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 125/308 (40%), Gaps = 40/308 (12%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+ +N++L+A + +G+ +F +R++ +KP TYG +L+
Sbjct: 129 PDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYG------------ILLNRL 176
Query: 372 WEEGKINEAVAAVRNMEQRG--VVGTASVYYELACCLCNNGRWQDAMLVV-EKIKSLRHS 428
+ G + +A+ + M G V + + LC GR QDA++ V E+++ +
Sbjct: 177 CKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGC 236
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
P +T+ L + G ID I + M K+ PN+ T+N ++ R A +
Sbjct: 237 APNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALD 296
Query: 488 LFEE--TT----RANSSGYT-----FLSGDGAPL-------------KPDEYTYSSMLEA 523
F E TT R N+ Y+ FL + L PD Y +M+
Sbjct: 297 FFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISG 356
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
A + + M +G +LD+ + L+ R + H F+ + AG P
Sbjct: 357 LTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPD 416
Query: 584 PLFFTEML 591
+ +L
Sbjct: 417 VYTYNTLL 424
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 162/418 (38%), Gaps = 76/418 (18%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES----------- 358
+EP++VVY+++L S +W+ V VF ++ + G++P Y ++S
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAH 240
Query: 359 ------YRRCL------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
RR L VL+ +EG + EA+ ++ M ++GV Y L L
Sbjct: 241 GVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300
Query: 407 CNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 464
+ +AM L+ E ++ KP +TF +I D G + + M++ C
Sbjct: 301 SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMV 360
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
N+ T N ++ R KA EL +E T L+PD +TYS +++
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG-------------LEPDSFTYSILIKGF 407
Query: 525 ATAHQW-----------------EYFEYVYKGMALSGCQ-------------------LD 548
Q E F Y+ +A+ C+ LD
Sbjct: 408 CKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAM--CEQGMMERARNLFNEMDNNFPLD 465
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
++ ++ A +AG + S+++ G P + ++ ++ + E A ++
Sbjct: 466 VVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLK 525
Query: 609 AMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 666
M + F + L + + +K+ +L+ + N A +S LS +L A
Sbjct: 526 QMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVA 583
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 95/459 (20%), Positives = 174/459 (37%), Gaps = 73/459 (15%)
Query: 135 GSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQML 194
G+ A ++E HP R A + VL+ L + + +R M +G+
Sbjct: 97 GALLRAMSLEPHPA--CRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYG 154
Query: 195 KLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN 252
L++GL D +A+ ++ + G++ + VY+ LL K+GR + ++F
Sbjct: 155 TLIRGLCDAAEVDKAVELMGEMCESGIE-----PNVVVYSSLLQGYCKSGRWEDVGKVFV 209
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
M E + PD+ Y + +L +VG K+ +++ M ++ LEP
Sbjct: 210 EMSEK-GIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG---------------LEP 253
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCL--------- 363
++V YN ++N K V K++ + G+ P TY ++ L
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313
Query: 364 ----------------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+++ + G++ +A ME+ G + Y L L
Sbjct: 314 EEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLL 373
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
+ + AM +++++ SL +P T++ LI +D + M+D EP +
Sbjct: 374 RVHKVRKAMELMDEMTSL-GLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPEL 432
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTR---ANSSGYTFL------SGD----------- 506
+L M +A+ LF E + Y+ + +GD
Sbjct: 433 FHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492
Query: 507 -GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
L PD TYS ++ A + E V K M SG
Sbjct: 493 VDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASG 531
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 144/393 (36%), Gaps = 61/393 (15%)
Query: 235 LAILGKAGRPHEA------LRIFNL-----MLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
LA+L + GR A LR+ L +L+ D +Y++V L + G
Sbjct: 37 LAVLHRRGRAEAAACLNRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRA 96
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
L+ M +P P P+ V Y ++ A + + +R +
Sbjct: 97 GALLRAMSLEPH------------PACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSA 144
Query: 344 GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
G++ TYG L+R + ++++AV + M + G+ VY L
Sbjct: 145 GVRADVVTYG------------TLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLL 192
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHC 462
C +GRW+D V ++ S + +P + +TGLI S G + M +
Sbjct: 193 QGYCKSGRWEDVGKVFVEM-SEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251
Query: 463 EPNIGT----VNAMLKVYSRNDMFSKAKELFEETTRANSSGY-TFLSGDGAPL------- 510
EPN+ T +N M K S + K++ E+ + Y T + G L
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311
Query: 511 ------------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
KP+ T++S+++ + V M +GC ++ + L+
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
R K D + G P ++ ++
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILI 404
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 35/196 (17%)
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV--- 270
D + ++D+ F Y LL + + G A +FN M D N D+ AY ++
Sbjct: 418 DLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM--DNNFPLDVVAYSTMIHG 475
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
A G + KEL+K I D L PD V Y+ V+N S
Sbjct: 476 ACKAGDLKTAKELLKSI------------------VDEGLTPDAVTYSIVINMFAKSGDM 517
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
+ V KQ+ SG P A + L++ + +G+IN+ + +R M +
Sbjct: 518 EAANGVLKQMTASGFLPDVAVF------------DSLIQGYSTKGEINKVLELIREMITK 565
Query: 391 GVVGTASVYYELACCL 406
+ + + L+ L
Sbjct: 566 NIALDSKIISTLSTSL 581
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 112/518 (21%), Positives = 211/518 (40%), Gaps = 63/518 (12%)
Query: 136 SDYFAKNVEWHPEKRWR---SEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQ 192
S++++ V H + + S+ + +L++ S+ ++ + + + G
Sbjct: 85 SNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVIT 144
Query: 193 MLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN 252
+ L+KGL KG QA+ D V L + + Y L+ L K G+ AL++
Sbjct: 145 LTTLIKGLCLKGQIHQALQFHDKVVALGFHLN---KVSYGTLINGLCKVGQTSAALQL-- 199
Query: 253 LMLEDCNLY-PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
L D L P++ Y+++ ++ +V L+ E L M K +
Sbjct: 200 LRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG---------------IS 244
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+V YNA+++ + K +F ++ + P+ T+ +LV F
Sbjct: 245 PDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFN------------ILVDGF 292
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+E ++ EA + M ++G+ Y L C A + I S R P
Sbjct: 293 CKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTI-SQRGVNPN 351
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDHCE---PNIGTVNAMLKVYSRNDMFSKAKEL 488
+++ +I +D+ +++F+ M HC P++ T N+++ + S A +L
Sbjct: 352 IHSYSIMIHGFCKIKKVDEAMNLFKEM--HCNNIIPDVVTYNSLIDGLCKLGKISYALKL 409
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+E + G P D+ TY+S+L+A HQ + + M G Q D
Sbjct: 410 VDE-----------MHDRGVP--HDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 456
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+ L+ + G+ F+ LL G I +T M+ +++++ L++
Sbjct: 457 ICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLS 516
Query: 609 AM---AYAPFHIT-ERQWTELFESNEDRISRDKLEKLL 642
M P +T E LF+ +E+ DK EKLL
Sbjct: 517 KMEENGCIPNAVTYEIIICSLFDKDEN----DKAEKLL 550
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 146/351 (41%), Gaps = 60/351 (17%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLG-DKGSWRQAMSVLDWVYGLKDKRDLKSRF------- 229
V+++N++ +++E + KG+ D ++ +S V +KD DL ++
Sbjct: 225 VKLVNEAFDLYSE----MVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINP 280
Query: 230 -VYTKLLAILG--KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA---VTLGQVGLLKEL 283
VYT + + G K R EA + +M++ + PD+ Y+S+ + +V K +
Sbjct: 281 NVYTFNILVDGFCKERRLKEAKNVLAMMMKQ-GIKPDVFTYNSLMDRYCLVKEVNKAKHI 339
Query: 284 VKLIERMRQKPS--------------KRI-------KNMHRKNWDPVLEPDLVVYNAVLN 322
I + P+ K++ K MH N + PD+V YN++++
Sbjct: 340 FNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNN----IIPDVVTYNSLID 395
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA 382
+ + ++ G+ TY ++ A + ++++A+A
Sbjct: 396 GLCKLGKISYALKLVDEMHDRGVPHDKITYNSILD------------ALCKNHQVDKAIA 443
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT-FTGLIIS 441
+ M+ G+ Y L LC NGR +DA +V E + L L++ +T +I
Sbjct: 444 LLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDL--LVKGYILDVNIYTAMIQG 501
Query: 442 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
G D+ + + M+++ C PN T ++ D KA++L E
Sbjct: 502 FCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLRE 552
>gi|299116347|emb|CBN76149.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1139
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 167/423 (39%), Gaps = 49/423 (11%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+E + PD+ Y+S+ L G +++++ M+ K + PD+
Sbjct: 571 MERRGVEPDVVTYNSLINVLRWGGQRDRALEILD-----------GMNAKGGAGGVRPDV 619
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+ YN+ + AC + K + ++R+ GLKP +Y A + A +
Sbjct: 620 ITYNSAIAACASGGESKKASQLIGEMRRKGLKPDRYSYTSA------------IHACSKA 667
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELAC--CLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
G EA+ +R ME VV V AC L G+W +A+ ++++++S + P E
Sbjct: 668 GNPEEALRLLRAMEASNVV--PDVIAMTACMDALAAGGKWSEAITILDEMRS-KGVTPNE 724
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEE 491
T+ I + GG + + +++ + N + +A L E+
Sbjct: 725 RTYKAAIQACGRGGQWQRALELLSRLENRASGATVQEYNCAMMACVTGGESGRALALLEQ 784
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
+AN G PD TY+S + A ++ +W+ + M +G +
Sbjct: 785 -MKANKGGVNA--------GPDMVTYTSAIMACSSTGKWDRALSLLDEMREAGPRTQPNI 835
Query: 552 HAWLLVEASRAGKCHLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
++ A+ G+ E A LLE G P P F ++ A ++ ++ L+
Sbjct: 836 RSYTAAIAA-CGRARKWEEAVALHSKLLEEGMSPDPASFNAVIRAARRGGQHKLSMKLLA 894
Query: 609 AMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNA--ASS-----EITVSNLS 661
+M A EL S DR D ++++ A ASS E+ VS L
Sbjct: 895 SMVEAGLTPDGVTVGELISSLSDRGRWDDAQRVVEIAEKTGAIPASSLDSDFEVDVSQLP 954
Query: 662 RAL 664
A+
Sbjct: 955 PAI 957
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 133/331 (40%), Gaps = 51/331 (15%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R+ YT + KAG P EALR+ M E N+ PD+ A + L G E + ++
Sbjct: 654 RYSYTSAIHACSKAGNPEEALRLLRAM-EASNVVPDVIAMTACMDALAAGGKWSEAITIL 712
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ MR K + P+ Y A + AC QW+ + +L +
Sbjct: 713 DEMRSKG---------------VTPNERTYKAAIQACGRGGQWQRALELLSRLEN---RA 754
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME--QRGV-VGTASVYYELAC 404
S AT ++ Y C + V G+ A+A + M+ + GV G V Y A
Sbjct: 755 SGAT----VQEY-NCAMMACVTG----GESGRALALLEQMKANKGGVNAGPDMVTYTSAI 805
Query: 405 CLCNN-GRWQDAMLVVEKIK-SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDH 461
C++ G+W A+ ++++++ + ++P ++T I + ++ +++ +++
Sbjct: 806 MACSSTGKWDRALSLLDEMREAGPRTQPNIRSYTAAIAACGRARKWEEAVALHSKLLEEG 865
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
P+ + NA+++ R + +L A L PD T ++
Sbjct: 866 MSPDPASFNAVIRAARRGGQHKLSMKLLASMVEAG-------------LTPDGVTVGELI 912
Query: 522 EASATAHQWE----YFEYVYKGMALSGCQLD 548
+ + +W+ E K A+ LD
Sbjct: 913 SSLSDRGRWDDAQRVVEIAEKTGAIPASSLD 943
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 101/283 (35%), Gaps = 66/283 (23%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
+ +R M S ++ M + L G W +A+++LD ++ K + Y +
Sbjct: 675 RLLRAMEASNVVPDVIAMTACMDALAAGGKWSEAITILDE---MRSKGVTPNERTYKAAI 731
Query: 236 AILGKAGRPHEALRI---------------FNLMLEDC---------------------- 258
G+ G+ AL + +N + C
Sbjct: 732 QACGRGGQWQRALELLSRLENRASGATVQEYNCAMMACVTGGESGRALALLEQMKANKGG 791
Query: 259 -NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVY 317
N PD+ Y S + G + L++ MR+ P +P++ Y
Sbjct: 792 VNAGPDMVTYTSAIMACSSTGKWDRALSLLDEMREA-------------GPRTQPNIRSY 838
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
A + AC + +W+ + +L + G+ P A++ ++RA G+
Sbjct: 839 TAAIAACGRARKWEEAVALHSKLLEEGMSPDPASF------------NAVIRAARRGGQH 886
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
++ + +M + G+ EL L + GRW DA VVE
Sbjct: 887 KLSMKLLASMVEAGLTPDGVTVGELISSLSDRGRWDDAQRVVE 929
>gi|15229107|ref|NP_190493.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183725|sp|Q9M3A8.1|PP273_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49240; AltName: Full=Protein EMBRYO DEFECTIVE 1796
gi|6723394|emb|CAB66403.1| putative protein [Arabidopsis thaliana]
gi|20466250|gb|AAM20442.1| putative protein [Arabidopsis thaliana]
gi|31711738|gb|AAP68225.1| At3g49240 [Arabidopsis thaliana]
gi|58013028|gb|AAW62967.1| mitochondrial embryo-defective 1796 [Arabidopsis thaliana]
gi|332644993|gb|AEE78514.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 147/342 (42%), Gaps = 47/342 (13%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
+P AL + L +++ L P IA + + L L++ +++ E M K
Sbjct: 180 KPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGF------- 232
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK--SGLKPSAATYGLAMESYR 360
V++P VVY+ ++ CV + GV ++++L++ G YG M+ Y
Sbjct: 233 ------VVDP--VVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGY- 283
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
+K + + E EAV E V +A Y + L NG++ +A+ + +
Sbjct: 284 --FMKEMEKEAME--CYEEAVG-----ENSKVRMSAMAYNYVLEALSENGKFDEALKLFD 334
Query: 421 KIKSLRHSKPLEI-----TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLK 474
+K H+ P + TF ++ GG ++ + +F+ M D C P+ + N ++
Sbjct: 335 AVKK-EHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMN 393
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
N++ ++A++L+ E N +KPDEYTY +++ + +
Sbjct: 394 QLCDNELLAEAEKLYGEMEEKN-------------VKPDEYTYGLLMDTCFKEGKIDEGA 440
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
YK M S + + + L + +AGK + FD ++
Sbjct: 441 AYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMV 482
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 114/274 (41%), Gaps = 42/274 (15%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
+L+KG K ++AM + G K + S Y +L L + G+ EAL++F+ +
Sbjct: 278 QLMKGYFMKEMEKEAMECYEEAVGENSKVRM-SAMAYNYVLEALSENGKFDEALKLFDAV 336
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELV----KLIERMRQKPSKRIKNMHRKNWDPVL 310
++ N +AV LG ++ K E M + R+ D
Sbjct: 337 KKEHN------PPRHLAVNLGTFNVMVNGYCAGGKFEEAME---------VFRQMGDFKC 381
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
PD + +N ++N + ++ ++ + +KP TYGL M++ C
Sbjct: 382 SPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDT---C-------- 430
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM----LVVEKIKSLR 426
++EGKI+E A + M + + +VY L L G+ DA ++V K+K
Sbjct: 431 -FKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDD 489
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 460
+ + ++ + + G +D+ + I M D
Sbjct: 490 EA------YKFIMRALSEAGRLDEMLKIVDEMLD 517
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/416 (19%), Positives = 164/416 (39%), Gaps = 90/416 (21%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+E+ ++PD+ Y+++ + GLL+E +L++ M K L+P +
Sbjct: 280 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG---------------LKPCV 324
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG-LAMESYRR------------ 361
YNA++N + ++ V ++ K G+ P ATY L +E R
Sbjct: 325 FTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDE 384
Query: 362 ----------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
L+ + G +++A+ R+M+ G+ +Y L C NG
Sbjct: 385 MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 444
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTV 469
+A+ V +++ L L++ I++ + + + +F M + P+ T
Sbjct: 445 MSEALKVRDEM--LEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 502
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
++ YS++ +KA LFE + N LKPD TY+++++ +
Sbjct: 503 TTLINGYSKDGNMNKAVTLFEMMIQRN-------------LKPDVVTYNTLIDGFCKGSE 549
Query: 530 WE--------------YFEYVYKGMALSG-CQLDQTKHAWLL--------VEAS------ 560
E Y ++ G+ ++G C + A+ L EA+
Sbjct: 550 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 609
Query: 561 ------RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
RAG + ++L G +P + + ++ I + N ++A AL+N M
Sbjct: 610 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 665
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 160/435 (36%), Gaps = 63/435 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL G + +A VLD + + D + Y LL + +A RIF+ M
Sbjct: 330 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT---YNILLVECCRNDNMMDAERIFDEMP 386
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNW------ 306
+ PD+ ++ ++ L + G L + +K M+ P I + +
Sbjct: 387 SQ-GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 445
Query: 307 -------DPVLEP----DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
D +LE D+V YN +LN +F ++ + G+ P T+
Sbjct: 446 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF--- 502
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+ + ++G +N+AV M QR + Y L C
Sbjct: 503 ---------TTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE---- 549
Query: 416 MLVVEKIKSL------RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGT 468
+EK+ L R P I++ LI + G + + ++ M + E I T
Sbjct: 550 ---MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 606
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
N ++K Y R KA E L G + PD TY++++
Sbjct: 607 CNTIVKGYCRAGNAVKADEFLSNM---------LLKG----IVPDGITYNTLINGFIKEE 653
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ + M SG D + +L SR G+ E ++E G P +T
Sbjct: 654 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 713
Query: 589 EMLIQAIVQSNYEKA 603
++ + Q+N ++A
Sbjct: 714 SLINGHVTQNNLKEA 728
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 112/302 (37%), Gaps = 27/302 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++ ++ N ++NA + + + + + G+ P TY L+
Sbjct: 250 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTY------------NTLIN 297
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
A+ +G + EA + +M +G+ Y + LC G++ A V++++ + S
Sbjct: 298 AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS- 356
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+ L++ ++ D IF M P++ + +A++ + S+N +A +
Sbjct: 357 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 416
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F + A L PD Y+ ++ V M GC LD
Sbjct: 417 FRDMKNAG-------------LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLD 463
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+ +L + + F + E G P FT ++ N KAV L
Sbjct: 464 VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFE 523
Query: 609 AM 610
M
Sbjct: 524 MM 525
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 111/263 (42%), Gaps = 23/263 (8%)
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRC-----LLKVLVRAFWEEGKINEAVAAVRNMEQR 390
+ + +RKSG+ L + +Y C + +LVR + + K+ E A R ++ +
Sbjct: 155 ILRMVRKSGVSRVEIVESLVL-TYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSK 213
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHID 449
G+ + + L L G W D + + + +R + + ++I+++ I+
Sbjct: 214 GLCVSINACNSLLGGLVKVG-WVDLAWEIYQ-EVVRSGVQVNVYTLNIMINALCKNQKIE 271
Query: 450 DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
+ S M++ P++ T N ++ Y R + +A EL + +SG G
Sbjct: 272 NTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDS-----------MSGKG- 319
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
LKP +TY++++ ++ + V M G D + LLVE R
Sbjct: 320 -LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 378
Query: 569 EHAFDSLLEAGEIPHPLFFTEML 591
E FD + G +P + F+ ++
Sbjct: 379 ERIFDEMPSQGVVPDLVSFSALI 401
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 159/391 (40%), Gaps = 59/391 (15%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+RF ++ L+A L KAGR EA+ +N MLE + P++ + + +L Q G + + + +
Sbjct: 2 NRFTFSVLIAGLCKAGRLGEAVECYNQMLER-HCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-GL 345
++ PS ++ N ++N +F ++ K+ L
Sbjct: 61 FRGIQCSPS------------------VITLNILINGFCELQLLDKALELFHEMEKNFAL 102
Query: 346 KPSAATYGLAMESYRR---------------CL------LKVLVRAFWEEGKINEAVAAV 384
P A TY ++ Y + C + + R F + +++EA +
Sbjct: 103 VPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLL 162
Query: 385 RNMEQRGVVGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 443
+M ++ V + + C GR ++A ++E + S+ P +T+T LI
Sbjct: 163 LDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSM-GCVPNAVTYTTLIDGFC 221
Query: 444 DGGHIDDCISIFQHMKD---HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
G++ + + +F+ + H EPN+ T NA++ + D A EL ++ +
Sbjct: 222 KSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARD---- 277
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
L+ D +TY+++++ + V++ M GC + L+
Sbjct: 278 ---------LRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHC 328
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+AG + S++ G P +T +L
Sbjct: 329 KAGSLQDAQQVIRSMVAKGIPPDVTTYTVLL 359
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 110/266 (41%), Gaps = 32/266 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G R+A +L+ + + + + YT L+ K+G EAL++F ++
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGC---VPNAVTYTTLIDGFCKSGNLSEALQLFKVLS 237
Query: 256 E-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
D + P++ ++++ L + L+ +L+++M+ + L D
Sbjct: 238 SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARD---------------LRADT 282
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
Y +++ + V VF+++ + G PS TY LV A +
Sbjct: 283 FTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTY------------TTLVHAHCKA 330
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
G + +A +R+M +G+ + Y L L NG+ + A EKI R P +
Sbjct: 331 GSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRER-CPPCAVV 389
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKD 460
++ L+ +D+ + + M D
Sbjct: 390 YSALVRGCCKAALVDEAVKYYVEMLD 415
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 159/391 (40%), Gaps = 45/391 (11%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L PD+ Y +++ + F VF ++ K G P++ TY L+
Sbjct: 229 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTY------------STLIN 276
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
EG+++EA+ + M ++G+ T Y LC ++A+ +V ++K R +
Sbjct: 277 GLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKK-RGCR 335
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+T LI G ++ I ++ M K+ PN T NA++ FS A ++
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395
Query: 489 FE----ETTRANSSGYT------FLSGD-------------GAPLKPDEYTYSSMLEASA 525
F + AN+ Y L GD PL P TY++++
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL-PTVVTYNTLINGYL 454
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
T + M +GC+ D+ + L+ S+ GK F ++E G P+P+
Sbjct: 455 TKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPV 514
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE--SNEDRISRDKLEKLLN 643
+T ++ + A++L+ M + + + S E+R S + EK+ +
Sbjct: 515 SYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS--EAEKICD 572
Query: 644 ALCNCNAASSEITVSNLSRALHALCRSEKER 674
+ + IT + L + LCR+ + +
Sbjct: 573 KMVEQGLLPNVITYTTL---IDGLCRNGRTQ 600
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/406 (19%), Positives = 161/406 (39%), Gaps = 61/406 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L G + A+ + W+ G L + Y +++ L G +A+ +F ML
Sbjct: 379 LINELCVGGRFSTALKIFHWMEG---HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ L P + Y+++ G + +L++ M++ EPD
Sbjct: 436 KMGPL-PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGC---------------EPDEW 479
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR--------CLLK-- 365
YN +++ + + + F+++ + GL P+ +Y ++ + + LLK
Sbjct: 480 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539
Query: 366 -------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
++ +E + +EA M ++G++ Y L LC NGR
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 471
Q A + ++ R P T++ LI G D+ + M + CEP + T +
Sbjct: 600 QFAFKIFHDMEK-RKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYST 654
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
++ R F +A++L ++ G+ PD Y S+L A + +
Sbjct: 655 LVSGLCRKGRFYEAEQLVKDM---KERGFC----------PDREIYYSLLIAHCKNLEVD 701
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+ ++ + G QL + + L+ +AG+ + FD++LE
Sbjct: 702 HALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLE 747
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 97/237 (40%), Gaps = 19/237 (8%)
Query: 379 EAVAAVRNMEQR----GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
E V RN+ ++ G+ + + L L G+ ++A L++ +I S P T
Sbjct: 177 EMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLS-PDVFT 235
Query: 435 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+T LI+ ++D +F M K+ C+PN T + ++ +A ++ EE
Sbjct: 236 YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI 295
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
++P YTY+ + A E + M GC+ + +
Sbjct: 296 EKG-------------IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT 342
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L+ SR GK + + +L+ G +P+ + + ++ + V + A+ + + M
Sbjct: 343 ALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 399
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 118/266 (44%), Gaps = 33/266 (12%)
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM--RQKPSK 296
+A + EA+ FN+M E + P++AA++S+ L + +++ ++ E+M R P
Sbjct: 147 ARAQKVDEAVYTFNVM-EKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGRFSPDA 205
Query: 297 RIKNMHRKNW-----------------DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ ++ + W D +PD+V Y ++++ + + + +V +
Sbjct: 206 KTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQD 265
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ G +P+ Y VLV + E +I +AVA +M++ G+V VY
Sbjct: 266 MTSRGCQPTTFIYS------------VLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVY 313
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
L C ++ +A V++ ++ P T+ ++ + G D+ +F+ M
Sbjct: 314 NALVTAFCKVKKFDNAFRVMDDMEG-HGITPNSRTWNIILNKLISLGKDDEAYRVFRRMI 372
Query: 460 DHCEPNIGTVNAMLKVYSRNDMFSKA 485
C+P+ T M+K++ ND A
Sbjct: 373 KRCQPDSDTYTMMIKMFCENDRLEMA 398
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 15/159 (9%)
Query: 448 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
+D+ + F M+ + PN+ N++L ++ KA+E+FE+
Sbjct: 152 VDEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMN------------- 198
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
PD TYS +LE A VY M +GCQ D + ++ + G+
Sbjct: 199 -GRFSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVE 257
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
+ G P ++ ++ V+ E AVA
Sbjct: 258 EAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVA 296
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/306 (17%), Positives = 111/306 (36%), Gaps = 62/306 (20%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGK 376
++ V+ + Q++ ++ V +R+ G+ + T+G+ M Y R K
Sbjct: 105 FHTVVASLAKIRQYQLMWDVVAIMRRQGV-VNVETFGIIMRKYAR------------AQK 151
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
++EAV ME+ GVV + + L C LC K K++R ++
Sbjct: 152 VDEAVYTFNVMEKYGVVPNLAAFNSLLCALC-------------KSKNVRKAQ------- 191
Query: 437 GLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
IF+ M P+ T + +L+ + R K ++++ + A
Sbjct: 192 ----------------EIFEQMNGRFSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAG 235
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+PD TY M+++ + E +V + M GCQ ++ L+
Sbjct: 236 C-------------QPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLV 282
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 616
+ F + + G +P + + ++ ++ A +++ M
Sbjct: 283 HTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGIT 342
Query: 617 ITERQW 622
R W
Sbjct: 343 PNSRTW 348
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 126/323 (39%), Gaps = 82/323 (25%)
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILG 239
+M + G++ LL L + R+A + + + G + D K+ Y+ LL G
Sbjct: 161 VMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNG-RFSPDAKT---YSILLEGWG 216
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSK 296
+A + ++++ ML D PDI Y + +L + G ++E V +++ M + P+
Sbjct: 217 RAPNLPKMRKVYSDML-DAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTT 275
Query: 297 RIKNMHRKNW-------DPV----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
I ++ + D V + PD+VVYNA++ A ++ F V
Sbjct: 276 FIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDD 335
Query: 340 LRKSGLKPSAATYGLAM----------ESYR-------RC-------------------- 362
+ G+ P++ T+ + + E+YR RC
Sbjct: 336 MEGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRCQPDSDTYTMMIKMFCENDRL 395
Query: 363 --------------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
VL+ ++G++++A + +M ++G+ S + +L
Sbjct: 396 EMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKL 455
Query: 403 ACCLCNNGRWQDAMLVVEKIKSL 425
L GR +V+K+K L
Sbjct: 456 RQLLLKEGRKDVLEFLVDKMKIL 478
>gi|242092154|ref|XP_002436567.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
gi|241914790|gb|EER87934.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
Length = 492
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 127/284 (44%), Gaps = 40/284 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y KL+ +LGK +P +A +F M+++ P++ +Y ++ + G E L++R
Sbjct: 143 IYIKLITMLGKCKKPEKAHELFQAMIDE-GCAPNLESYTALVSAYSRSGRFHEAFNLLDR 201
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ P +PD+ Y+ ++ +C+ ++ ++ V + + ++G++P+
Sbjct: 202 MKDTPG--------------CQPDVKTYSILIKSCLHAYDFEKVKSLLTDMARAGIRPNT 247
Query: 350 ATYGLAMESY---RR------CLLKVL--------------VRAFWEEGKINEAVAAVRN 386
TY +++Y RR LLK+L +RAF G+I +
Sbjct: 248 VTYNTLIDAYGKARRFPEMESTLLKMLSQNCKPDIWTMNSTLRAFGSSGQIETMESCYEK 307
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
+ G+V Y L ++ V+E ++ +S + +T+ +I + G
Sbjct: 308 FQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTI-VTYNVVIDAFGRAG 366
Query: 447 HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
++ IF+ MK + +PN T+ ++++ Y R K K +
Sbjct: 367 DLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTVL 410
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 75/183 (40%), Gaps = 23/183 (12%)
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
++T L+ + G + ++ MKD C+P++ T + ++K F K K L +
Sbjct: 178 SYTALVSAYSRSGRFHEAFNLLDRMKDTPGCQPDVKTYSILIKSCLHAYDFEKVKSLLTD 237
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
RA ++P+ TY+++++A A ++ E M C+ D
Sbjct: 238 MARAG-------------IRPNTVTYNTLIDAYGKARRFPEMESTLLKMLSQNCKPD--- 281
Query: 552 HAWLLVEASRA----GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 607
W + RA G+ +E ++ +G +P+ + +L YEK A++
Sbjct: 282 -IWTMNSTLRAFGSSGQIETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVM 340
Query: 608 NAM 610
M
Sbjct: 341 EYM 343
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 116/514 (22%), Positives = 202/514 (39%), Gaps = 72/514 (14%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
EK + VL+D L + K + + M + GLM L+ G +G
Sbjct: 351 EKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 208 QAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGR-PHEALRIFNLMLEDCNLYPDIA 265
A+ V++ L + R+L+ Y +L I G R H+A+ + N MLE + PD+
Sbjct: 411 DALDVVE----LMESRNLRPNTRTYNEL--IKGYCKRNVHKAMGVLNKMLER-KVLPDVV 463
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y+S+ + G +L+ M D L PD Y +++++
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMN---------------DRGLVPDPWTYTSMIDSLC 508
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
S + + +F L + + P+ Y L+ + + GK+NEA +
Sbjct: 509 KSKRVEEACDLFDSLEQKDVIPNVVMY------------TALIDGYCKAGKVNEAHLMLE 556
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M + + + + L LC +G+ ++A L+ EK+ + +P T T LI +
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKI-DLQPTVSTDTILIHRLLKD 615
Query: 446 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G D FQ M +P+ T ++ Y R A+++ + S
Sbjct: 616 GDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVS------ 669
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL-LVEASRAG 563
PD +TYSS+++ + V K M +GC+ Q H +L L++
Sbjct: 670 -------PDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQ--HTFLSLIK----- 715
Query: 564 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV---ALINAMAYAPFHI--- 617
HLLE + ++ GE P + M+ IV EK V NA +Y +
Sbjct: 716 --HLLEMKYGK-VKGGE-PGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGIC 771
Query: 618 ---TERQWTELFESNEDRISRDKLEKLLNALCNC 648
R ++F+ + + E + NAL +C
Sbjct: 772 EIGNLRVAEKVFDHMQQKEGISPSELVFNALLSC 805
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 162/408 (39%), Gaps = 66/408 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y LL L + G E +++ MLED + P+I Y+ + +VG ++E + + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLED-KVCPNIYTYNKMVNGYCKVGNVEEANQYVSMI 244
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ L+PD Y +++ F VFK++ G + +
Sbjct: 245 VEAG---------------LDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEV 289
Query: 351 TY-----GLAMESYRR---------------CL-----LKVLVRAFWEEGKINEAVAAVR 385
Y GL +E RR C VL++A + +EA+ V+
Sbjct: 290 AYTHLIHGLCVE--RRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVK 347
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
ME++G+ Y L LC+ + + A ++ ++ + P IT+ LI
Sbjct: 348 EMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLE-KGLMPNVITYNALINGYCKR 406
Query: 446 GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKA--------KELFEETTRAN 496
G I+D + + + M+ + PN T N ++K Y + ++ +++ + N
Sbjct: 407 GMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYN 466
Query: 497 S------------SGYTFLS-GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
S S Y LS + L PD +TY+SM+++ + + E ++ +
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + L+ +AGK + + +L +P+ L F ++
Sbjct: 527 DVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALI 574
>gi|225456802|ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 159/378 (42%), Gaps = 59/378 (15%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR-FVYTK 233
W+F + MN+ G+ ++ + L+K D+G +A+ + + +K+ + S VY
Sbjct: 298 WEFFQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEM----EKKGISSNAIVYNT 353
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+ K+ R EA +F M + + P A Y+ + + R +
Sbjct: 354 LMDAYSKSNRVEEAEGLFGEM-KAKGVMPTSATYNILMDAYSR--------------RMQ 398
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW-VFKQLRKSGLKPSAATY 352
P + I+N+ + D LEP++ Y +++A + + F +++K G+KP++ +Y
Sbjct: 399 P-EIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSY 457
Query: 353 GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
L+ A+ G +A A NM++ G+ + Y L G
Sbjct: 458 ------------TALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDT 505
Query: 413 QDAM-----LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS-IFQHMKDHCEPNI 466
Q M ++ +KI+ R +TF L+ GH + IF+ K +P +
Sbjct: 506 QTLMKIWKLMLSDKIEGTR------VTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTV 559
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T N ++ Y+R S+ +L +E T N LKPD TYS+M+ A
Sbjct: 560 MTYNMLMNAYARGGQHSRLPQLLKEMTSLN-------------LKPDSITYSTMIYAYVR 606
Query: 527 AHQWEYFEYVYKGMALSG 544
++ + +K M SG
Sbjct: 607 VRDFKRAFFYHKQMVKSG 624
>gi|298711148|emb|CBJ32373.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 962
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 177/448 (39%), Gaps = 67/448 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G GSW A +++D ++ RD + Y + +AG+ +A M
Sbjct: 238 VVSGYAVDGSWEDASALVDEMFANDVPRD---EYTYCAAMNACKEAGKWMQAAAFLPRMR 294
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ-----KPSKRIKNMHRKNWDPV- 309
ED + P+ AY++V +G K R+ +P+ +N R P
Sbjct: 295 ED-GVPPNTIAYNTV---IGACAFFGRPNKAWNNNRETSSFLRPTSTRENKGR-GLSPAQ 349
Query: 310 ---------------------LEPDLVVYNAVLNACVPSHQWKG--VFWVFKQLRKSGLK 346
+EPD++ Y ++++A P V +F+ L KSGLK
Sbjct: 350 AEASDAGDFALGLMEEMKREGVEPDIITYGSLMSALSPRGLAGADIVLELFETLAKSGLK 409
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME-QRGVVGTASVYYELACC 405
P++ TY A +RA+ ++G A + M+ + GV Y +
Sbjct: 410 PNSITYVSA------------IRAYGDKGDWERAEQMLVGMQKEHGVEPNRFCYSAVVKA 457
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPN 465
L N G+W+ A+ +++++ S + +T I + G + + + P
Sbjct: 458 LANGGQWKRALETLDEMRECGLSAD-PVVYTAAIGACEKFGQWEKALDTLSKLVSEKPPM 516
Query: 466 IGTV---NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
+ NA + + K+L T +A+ LKPDEYTY++M+
Sbjct: 517 RSLMWGYNAAISALGKAKQMEGIKDLVA-TMKASG------------LKPDEYTYAAMMR 563
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
AS WE + M +G + ++ + L+ + + + + + E G P
Sbjct: 564 ASGIDGSWEESWSMLVEMEQAGVRPNRVVYNTLIASVLKGEQMEKADDILNRMREGGVPP 623
Query: 583 HPLFFTEMLIQAIVQSNYEKAVALINAM 610
+T ++ +S++ +A AL++ M
Sbjct: 624 DVTTYTTIMSGCKRESDWRRAEALLSEM 651
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 140/342 (40%), Gaps = 48/342 (14%)
Query: 161 LVDRLSEREMTAKN--WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG 218
L+ LS R + + + + +SGL + ++ GDKG W +A +L G
Sbjct: 381 LMSALSPRGLAGADIVLELFETLAKSGLKPNSITYVSAIRAYGDKGDWERAEQML---VG 437
Query: 219 LKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
++ + ++ +RF Y+ ++ L G+ AL + M E C L D Y + +
Sbjct: 438 MQKEHGVEPNRFCYSAVVKALANGGQWKRALETLDEMRE-CGLSADPVVYTAAIGACEKF 496
Query: 278 G----LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
G L L KL+ +KP M W YNA ++A + Q +G+
Sbjct: 497 GQWEKALDTLSKLVS---EKPP-----MRSLMWG---------YNAAISALGKAKQMEGI 539
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
+ ++ SGLKP TY ++RA +G E+ + + MEQ GV
Sbjct: 540 KDLVATMKASGLKPDEYTYA------------AMMRASGIDGSWEESWSMLVEMEQAGVR 587
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM----DGGHID 449
VY L + + + A ++ +++ P ++T I+S D +
Sbjct: 588 PNRVVYNTLIASVLKGEQMEKADDILNRMR--EGGVPPDVTTYTTIMSGCKRESDWRRAE 645
Query: 450 DCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+S + +PN T+ A+LKVY +A LFE+
Sbjct: 646 ALLSEMESF--GVKPNSRTLTAVLKVYGDAGEVERALALFEQ 685
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 146/390 (37%), Gaps = 61/390 (15%)
Query: 229 FVYTKLLAILGKAGRPH-EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y L+A L ++ RPH E L + + M D + PD Y VG++K +
Sbjct: 161 FTYNLLIAALARSRRPHSEVLNLLDQMRCD-GIKPDSYTY---------VGVVKGI---- 206
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLE---PDL-VVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
Q P K M D LE DL VY+AV++ W+ + ++ +
Sbjct: 207 ----QGPKKNAM-MRAVLEDAKLELEGLDLSAVYSAVVSGYAVDGSWEDASALVDEMFAN 261
Query: 344 GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL- 402
+ TY AM + + E GK +A A + M + GV Y +
Sbjct: 262 DVPRDEYTYCAAMNACK------------EAGKWMQAAAFLPRMREDGVPPNTIAYNTVI 309
Query: 403 -ACCLCN--NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD-CISIFQHM 458
AC N W + E LR + E GL + + D + + + M
Sbjct: 310 GACAFFGRPNKAWNNNR---ETSSFLRPTSTRENKGRGLSPAQAEASDAGDFALGLMEEM 366
Query: 459 K-DHCEPNIGTVNAMLKVYSRNDMFSK--AKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
K + EP+I T +++ S + ELFE ++ LKP+
Sbjct: 367 KREGVEPDIITYGSLMSALSPRGLAGADIVLELFETLAKSG-------------LKPNSI 413
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALS-GCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 574
TY S + A WE E + GM G + ++ ++ ++ + G+ D
Sbjct: 414 TYVSAIRAYGDKGDWERAEQMLVGMQKEHGVEPNRFCYSAVVKALANGGQWKRALETLDE 473
Query: 575 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
+ E G P+ +T + +EKA+
Sbjct: 474 MRECGLSADPVVYTAAIGACEKFGQWEKAL 503
>gi|15232243|ref|NP_191564.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181813|sp|Q9M1D8.1|PP288_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g60050
gi|7076758|emb|CAB75920.1| putative protein [Arabidopsis thaliana]
gi|332646485|gb|AEE80006.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 473
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 141/355 (39%), Gaps = 45/355 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA-AYHSVAVTLGQVGLLKELVKLIER 289
Y L+ I + G R+ + M++D +P A ++ + + G+ GL K+ V ++
Sbjct: 152 YHLLMKIFAECGEYKAMWRLVDEMVQDG--FPTTARTFNLLICSCGEAGLAKQAV--VQF 207
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ K N+ P YNA+LN+ + Q+K + WV+KQ+ + G P
Sbjct: 208 MKSKTF---------NYRPFKHS----YNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDV 254
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY +L+ + GK++ M + G + Y L L
Sbjct: 255 LTY------------NILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKG 302
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
+ A+ + +K + P + +T LI G+++ C M K C P++
Sbjct: 303 NKPLAALTTLNHMKEV-GIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVC 361
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
M+ Y + KAKE+F E T P+ +TY+SM+ A
Sbjct: 362 YTVMITGYVVSGELDKAKEMFREMTVKGQ-------------LPNVFTYNSMIRGLCMAG 408
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
++ ++ K M GC + ++ L+ +AGK +++ G H
Sbjct: 409 EFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVH 463
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 104/268 (38%), Gaps = 24/268 (8%)
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+L++ F E G+ V M Q G TA + L C G + A++ K K+
Sbjct: 154 LLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTF 213
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 484
+ +P + ++ ++ S + +++ M +D P++ T N +L R +
Sbjct: 214 NY-RPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDR 272
Query: 485 AKELFEETTRANSS--GYTF------LSGDGAPLK--------------PDEYTYSSMLE 522
LF+E R S YT+ L PL P Y+++++
Sbjct: 273 FDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLID 332
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ A E +Y M +GC+ D + ++ +G+ + F + G++P
Sbjct: 333 GLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLP 392
Query: 583 HPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ + M+ + + +A L+ M
Sbjct: 393 NVFTYNSMIRGLCMAGEFREACWLLKEM 420
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 154/392 (39%), Gaps = 56/392 (14%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L KAG EA R+ M P++ Y + L +VG + E +LI+ M
Sbjct: 75 YNTLIDSLCKAGDLEEARRLHGDMSSR-GCVPNVVTYSVLINGLCKVGRIDEARELIQEM 133
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK--PS 348
RK+ D + P+++ YN+ L+ + + LR L+ P
Sbjct: 134 T-----------RKSCDVL--PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
T+ ++ +C G+I+EA + +M G V Y L LC
Sbjct: 181 TVTFSTLIDGLCKC------------GQIDEACSVFDDMIAGGYVPNVITYNALVNGLCK 228
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI- 466
+ + A ++E + + P IT++ L+ + +D+ + + M C PN+
Sbjct: 229 ADKMERAHAMIESMVD-KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVL 287
Query: 467 ----GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
T N ++ + F +A LFEE N L+PD T+ ++++
Sbjct: 288 VPDKVTFNILIAGACKAGNFEQASALFEEMVAKN-------------LQPDVMTFGALID 334
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK----CHLLEHAFDSLLEA 578
A Q E + M G + + L+ ++G+ C LE ++ +
Sbjct: 335 GLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE----MVSS 390
Query: 579 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
G +P + + ++ S + A+ L++ +
Sbjct: 391 GCVPDSITYGSLVYALCRASRTDDALQLVSEL 422
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 158/406 (38%), Gaps = 64/406 (15%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY---------- 359
+ P +V YN ++N S+ +F++L + G P TY ++S
Sbjct: 33 VAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEAR 92
Query: 360 --------RRCL-----LKVLVRAFWEEGKINEAVAAVRNMEQRG--VVGTASVYYELAC 404
R C+ VL+ + G+I+EA ++ M ++ V+ Y
Sbjct: 93 RLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLD 152
Query: 405 CLCNNGRWQDAMLVVEKIKSLRHS----KPLEITFTGLIISSMDGGHIDDCISIFQHM-K 459
LC +A E ++SLR P +TF+ LI G ID+ S+F M
Sbjct: 153 GLCKQSMTAEA---CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIA 209
Query: 460 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
PN+ T NA++ + D +A + E G T PD TYS
Sbjct: 210 GGYVPNVITYNALVNGLCKADKMERAHAMIESMV---DKGVT----------PDVITYSV 256
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQ-----LDQTKHAWLLVEASRAGKCHLLEHAFDS 574
+++A A + + + GMA GC D+ L+ A +AG F+
Sbjct: 257 LVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEE 316
Query: 575 LLEAGEIPHPLFFTEMLIQAIVQSNYEKA----VALINAMAYAPFHITERQWTE-LFESN 629
++ P + F LI + ++ +A + L+ + P +T L +S
Sbjct: 317 MVAKNLQPDVMTFGA-LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 375
Query: 630 EDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 675
+ LE+++++ C IT +L ++ALCR+ + D
Sbjct: 376 RIEEACQFLEEMVSSGC----VPDSITYGSL---VYALCRASRTDD 414
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 145/389 (37%), Gaps = 56/389 (14%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQML--KLLKGLGDKGSWRQAMSVLDWVYG 218
+D L ++ MTA+ + +R + L + + L+ GL G +A SV D +
Sbjct: 150 FLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIA 209
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ + Y L+ L KA + A + M+ D + PD+ Y + +
Sbjct: 210 ---GGYVPNVITYNALVNGLCKADKMERAHAMIESMV-DKGVTPDVITYSVLVDAFCKAS 265
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ E ++L+ M R VL PD V +N ++ + ++ +F+
Sbjct: 266 RVDEALELLHGMAS----------RGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFE 315
Query: 339 QLRKSGLKPSAATYGLAM---------ESYRRCL--------------LKVLVRAFWEEG 375
++ L+P T+G + E+ R L LV + G
Sbjct: 316 EMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 375
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+I EA + M G V + Y L LC R DA+ +V ++KS P +T+
Sbjct: 376 RIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGW-DPDTVTY 434
Query: 436 TGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
L+ G + I++ + M K H +P+ T A R+ + EL
Sbjct: 435 NILVDGLWKSGKTEQAITVLEEMVGKGH-QPDSFTFAACFSGLHRSGNLAGTMELLRVVL 493
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
+ PD T SS+L+
Sbjct: 494 AKG-------------MLPDATTCSSILD 509
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 161/435 (37%), Gaps = 109/435 (25%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L GL KG +A D + +K+K +R + L+ + G EA + LM
Sbjct: 238 ILDGLCKKGRLNEAR---DLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMS 294
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ ++ PD Y+ + + G + E ++L E M +N+ L PD+V
Sbjct: 295 QN-SVVPDAWTYNVMISGFCKQGRIAEAMRLREEM--------ENLK-------LSPDVV 338
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN ++N C + F + +++ G+KP++ TY V+V+ F ++G
Sbjct: 339 TYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTY------------NVMVKWFVKKG 386
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
K++E VR ME+ G + Y L C G+ +A +++++
Sbjct: 387 KMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEM------------- 433
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
G +DD T+N ML+ R +A +L A
Sbjct: 434 ------GRKGLKMDDV----------------TLNTMLRALCRERKLDEAHDLL---CSA 468
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSML-------EASATAHQWEYFE--------YVYKGM 540
GY DE +Y +++ +AS W+ + Y M
Sbjct: 469 RRRGYFV----------DEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSM 518
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 600
CQ+ +T A D LLE+G +P + + ++ +
Sbjct: 519 IAGLCQMGKTNQAI---------------DKLDELLESGLVPDEITYNTIIHGYCQEGQV 563
Query: 601 EKAVALINAMAYAPF 615
EKA N M F
Sbjct: 564 EKAFQFHNKMVEKNF 578
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 139/362 (38%), Gaps = 54/362 (14%)
Query: 241 AGRPHEALRIFNLM--------LEDCNLYPD----IAAYHSVAVTLGQ-VGLLKELVKLI 287
GRPH+A +IFN M L CN + + HS+ ++ +K VK+
Sbjct: 137 CGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKIN 196
Query: 288 ER----------MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
M + + I+ + K D PD + YN +L+ + +
Sbjct: 197 TNSFNILIHGSCMENRFGEAIRVLG-KMRDYGCPPDNITYNTILDGLCKKGRLNEARDLL 255
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
++ GL P+ T+ +LV G + EA + M Q VV A
Sbjct: 256 LDMKNKGLFPNRTTF------------NILVVGCCRLGWLKEAANVIELMSQNSVVPDAW 303
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y + C GR +AM + E++++L+ S P +T+ LI + G ++ + +
Sbjct: 304 TYNVMISGFCKQGRIAEAMRLREEMENLKLS-PDVVTYNTLINGCFEHGSSEEGFKLIEE 362
Query: 458 MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
M+ +PN T N M+K + + K E+ + + SG PD T
Sbjct: 363 MEGRGMKPNSVTYNVMVKWFVKK---GKMDEVDKTVRKMEESGCL----------PDIVT 409
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
Y++++ + + + M G ++D +L R K L+ A D L
Sbjct: 410 YNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERK---LDEAHDLLC 466
Query: 577 EA 578
A
Sbjct: 467 SA 468
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 118/297 (39%), Gaps = 37/297 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G + GS + +++ + G K + + V K GK + +R +
Sbjct: 343 LINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVR----KM 398
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ PDI Y+++ +VG + E +L++ M +K L+ D V
Sbjct: 399 EESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKG---------------LKMDDV 443
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
N +L A + + R+ G +YG L+ +++
Sbjct: 444 TLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYG------------TLIIGYFKHE 491
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEI 433
K ++A+ M+++ ++ + Y + LC G+ A ++K+ L S P EI
Sbjct: 492 KASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQA---IDKLDELLESGLVPDEI 548
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
T+ +I G ++ M + + +P++ T N +L + M KA +LF
Sbjct: 549 TYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLF 605
Score = 39.3 bits (90), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 85/220 (38%), Gaps = 29/220 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ K + +ALR+++ M E + P I Y+S+ L Q+G + + ++ +
Sbjct: 480 YGTLIIGYFKHEKASQALRLWDEMKEK-EIIPSIITYNSMIAGLCQMGKTNQAIDKLDEL 538
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ L PD + YN +++ Q + F ++ + KP
Sbjct: 539 LESG---------------LVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVV 583
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
T L+ +EG + +A+ +G A Y + LC
Sbjct: 584 T------------CNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEK 631
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
R+ +A ++E+++ + P T+ ++ D G + D
Sbjct: 632 RFGEAFDLLEEMEE-KKLGPDCYTYNAILGGLTDAGRMKD 670
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 153/370 (41%), Gaps = 59/370 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRD-LKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
L GL G R +S+ +G K+ + + + LL L K G+ +A ++ M
Sbjct: 306 LFDGLTRTGDSRTMLSL----FGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLE-M 360
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
L L P A Y+++ QV L+ + E+M+ S+ I+ PD
Sbjct: 361 LVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMK---SRHIR------------PDH 405
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR------CLLKV-- 366
+ YNA++N + ++ KSG+ PS T+ +++Y R C +
Sbjct: 406 ITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSD 465
Query: 367 ---------------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
+V+AF + GKI EAVA + +M + VV A VY + +G
Sbjct: 466 MQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGG 525
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
+ A L+VEK+KS S + T+ L+ ID+ + ++ + P++ + N
Sbjct: 526 TEQAFLLVEKMKSSGVSASI-FTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYN 584
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
++ +A EL +E + + ++P TY +L A +A +
Sbjct: 585 TIISACCNKGDTDRALELLQEMHKYD-------------IRPTLRTYHPLLSALGSAGRV 631
Query: 531 EYFEYVYKGM 540
E +Y+ M
Sbjct: 632 HDMECLYQHM 641
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 115/281 (40%), Gaps = 41/281 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++A L ++G+ +AL++F+ M+ D + P+ Y+++ + G L+ +L +
Sbjct: 196 FSYNVVIAGLWRSGKGSDALKVFDEMV-DRGVAPNQITYNTMIDGHVKGGDLEAGFRLRD 254
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M Q K P++V YN +L+ + + + ++ + P
Sbjct: 255 QMLQDGRK---------------PNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPD 299
Query: 349 AATY-----GLAMESYRRCLLK------------------VLVRAFWEEGKINEAVAAVR 385
TY GL R +L +L+ ++GK+ +A +
Sbjct: 300 GFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLE 359
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
+ G+V T ++Y L C Q A + E++KS RH +P IT+ LI
Sbjct: 360 MLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKS-RHIRPDHITYNALINGLCKM 418
Query: 446 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
I + + M K +P++ T N ++ Y R K
Sbjct: 419 EMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKC 459
>gi|225452658|ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Vitis vinifera]
gi|296087770|emb|CBI35026.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 164/398 (41%), Gaps = 63/398 (15%)
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
L + W++++++LDW+ ++ S F Y ++ + +A + A +F M +
Sbjct: 129 LSREPDWQRSLALLDWIN--EEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRA- 185
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
L PD Y ++ G+ G+ + +++M Q + DLV+Y+
Sbjct: 186 LAPDRYTYSTLITHFGKEGMFDSALSWLQKMEQDR---------------VSGDLVLYSN 230
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
++ + +F +L++SG+ P Y ++ F + E
Sbjct: 231 LIELSRKLCDYSKAISIFSRLKRSGISPDLVAYN------------SMINVFGKAKLFRE 278
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
A + M GV+ Y L NG++ +A+ V ++ +R PL++T ++
Sbjct: 279 ARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRC--PLDLTTCNVM 336
Query: 440 ISSMDGGHID---DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR- 494
I G +D + +F M+ EP I + N +L+VY ++F +A LF R
Sbjct: 337 IDVY--GQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRK 394
Query: 495 ---ANSSGY-TFLSGDGAPL-----------------KPDEYTYSSMLEASATAHQWEYF 533
N Y T + G L +P+ TYS+++ A + +
Sbjct: 395 DIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRA 454
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
+++ + SG ++DQ + ++V RAG L+ HA
Sbjct: 455 AMLFQKLRSSGIEIDQVLYQTMIVAYERAG---LVAHA 489
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/397 (19%), Positives = 155/397 (39%), Gaps = 52/397 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M G+M LL + G + +A+SV + ++ DL + V ++ + G+
Sbjct: 286 MRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNV---MIDVYGQ 342
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
EA R+F M + P I +Y+++ G+ L E + L M++K
Sbjct: 343 LDMAKEADRLFWSM-RKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKD------ 395
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+E ++V YN ++ S + + + ++++ G++P+A TY +
Sbjct: 396 ---------IEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTII---- 442
Query: 361 RCLLKVLVRAFWEE-GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
+ W++ GK++ A + + G+ +Y + G A ++
Sbjct: 443 ---------SIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLL 493
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSR 478
++K +P I I G I++ +F+ D E +I M+ ++SR
Sbjct: 494 HELK-----RPDNIPRETAITILAGAGRIEEATWVFRQAFDAGEVKDITVFGCMIDLFSR 548
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
N + E+F++ GA PD + +L A ++E + +YK
Sbjct: 549 NRKHTNVIEVFDKMR-------------GAGYFPDSNVIALVLNACGKLREFEKADAIYK 595
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
M GC H +L G +++ F+ L
Sbjct: 596 EMEEEGCVFSDEVHFQMLSLYGARGDFQMVDSLFERL 632
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 90/440 (20%), Positives = 170/440 (38%), Gaps = 63/440 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +G + A+S W+ ++ R +Y+ L+ + K +A+ IF+ L
Sbjct: 196 LITHFGKEGMFDSALS---WLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFS-RL 251
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK-------PSKRIKNMHRKN--- 305
+ + PD+ AY+S+ G+ L +E L+ MR + +M+ +N
Sbjct: 252 KRSGISPDLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKY 311
Query: 306 ---------WDPVLEP-DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ V P DL N +++ K +F +RK G++P +Y
Sbjct: 312 VEALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYN-- 369
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+R + E EA+ R M+++ + Y + + + A
Sbjct: 370 ----------TLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKA 419
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 474
+V+++++ R +P IT++ +I G +D +FQ ++ E + M+
Sbjct: 420 TNLVQEMQN-RGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIV 478
Query: 475 VYSRNDMFSKAKELFEETTRANS----SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
Y R + + AK L E R ++ + T L+G G ++ + + +A
Sbjct: 479 AYERAGLVAHAKRLLHELKRPDNIPRETAITILAGAGR-IEEATWVFRQAFDAGEV---- 533
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
K + + GC +D SR K + FD + AG P +
Sbjct: 534 -------KDITVFGCMIDLF---------SRNRKHTNVIEVFDKMRGAGYFPDSNVIALV 577
Query: 591 LIQAIVQSNYEKAVALINAM 610
L +EKA A+ M
Sbjct: 578 LNACGKLREFEKADAIYKEM 597
>gi|255551261|ref|XP_002516677.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544172|gb|EEF45696.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 37/223 (16%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRK---SGLKPSAATYGLAMESYRRCLLKVLV 368
PD +VY+ ++ CV + +GVF +F +L++ G+ YG L+
Sbjct: 245 PDPLVYHYLMVGCVRNLDSEGVFRLFDELKEKMGGGVIEDGVVYG------------DLM 292
Query: 369 RAFWEEGKINEAVAAVRNM--EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
+ ++ +G NEA+ E V A Y + LC NG++ A+ + +++ +
Sbjct: 293 KGYFMKGMENEAMECYEEAVGENSKVRMNAVAYNSVLDALCKNGKFDVALKLFDRMLQ-Q 351
Query: 427 HSKPLEI-----TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 480
H+ P + +F ++ G +D I +F+ M D+ C P++ + N ++ +N
Sbjct: 352 HNPPRYLAVNLGSFNVIVDGYCAQGRFEDAIDVFRKMGDYRCSPDVLSYNNLIDQLCKNG 411
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
M +A++L+ E DG +KPDEYTY +++
Sbjct: 412 MLVEAEDLYGEM-------------DGKGVKPDEYTYGLLMDT 441
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 131/348 (37%), Gaps = 40/348 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+KGL D G +A+ + D + G++ VY L+ + R+F+ +
Sbjct: 217 LIKGLVDNGKVDKALELKDEIIGVRGFT--PDPLVYHYLMVGCVRNLDSEGVFRLFDELK 274
Query: 256 EDC--NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
E + D Y + G+ E ++ E + SK N
Sbjct: 275 EKMGGGVIEDGVVYGDLMKGYFMKGMENEAMECYEEAVGENSKVRMNA------------ 322
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
V YN+VL+A + ++ +F ++ + P L V+V +
Sbjct: 323 -VAYNSVLDALCKNGKFDVALKLFDRMLQQHNPPRYLAVNLGS-------FNVIVDGYCA 374
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
+G+ +A+ R M Y L LC NG +A + ++ + KP E
Sbjct: 375 QGRFEDAIDVFRKMGDYRCSPDVLSYNNLIDQLCKNGMLVEAEDLYGEMDG-KGVKPDEY 433
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T+ L+ + ++ +DD F+ M D PN+ N ++ D K K++ E
Sbjct: 434 TYGLLMDTCLEKDRVDDGAGYFRKMVDTGLRPNLAVYNRLV------DKLVKLKKIDE-- 485
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
A S Y + LK D +Y M+EA A Q + + GM
Sbjct: 486 --AKSFYYLMVK----KLKMDNASYKFMMEALADNDQMDELIKMVDGM 527
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/438 (20%), Positives = 169/438 (38%), Gaps = 64/438 (14%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG-------LKDKRDLK---- 226
+ + Q GL +M +K G S + VLD + G RD+K
Sbjct: 118 ISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGF 177
Query: 227 --SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ F Y LL L K + A ++ + + + PD +Y +V ++ +VGL+KE
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLL-VEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+L ER EP + VYNA++N H +KG F + +++ + G
Sbjct: 237 ELAER--------------------FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKG 276
Query: 345 LKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL-- 402
+ P+ +Y L+ G+I A + + M +RG L
Sbjct: 277 ISPNVISY------------STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVK 324
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-H 461
C L G DA+ + ++ +P + + L+ G+I +S+F HM++
Sbjct: 325 GCFL--RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
C PNI T +++ +++ A ++ + + P+ Y++M+
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCC-------------PNVVVYTNMV 429
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
EA +++ E + + M+ C + AG+ E F + +
Sbjct: 430 EALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489
Query: 582 PHPLFFTEMLIQAIVQSN 599
P + L+ + ++N
Sbjct: 490 PPNIVTYNELLDGLAKAN 507
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 98/249 (39%), Gaps = 45/249 (18%)
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKR- 297
G +AL ++N M+ L P++ AY+++ G + + V + M + P+ R
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 298 ----IKNMHRKN--------WDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
I ++ W+ +L P++VVY ++ A ++K + + +
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 342 KSGLKPSAATY-----GLA--------------MESYRRCLLKV-----LVRAFWEEGKI 377
K PS T+ GL ME RC + L+ + +I
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
EA R + RGV ++S Y L CN G A+ +V K+ + P EIT
Sbjct: 510 EEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMM-VDGKSPDEITMNM 568
Query: 438 LIISSMDGG 446
+I++ G
Sbjct: 569 IILAYCKQG 577
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 140/362 (38%), Gaps = 43/362 (11%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G R +++D + ++ + + YT + +LG+AGR +A I M ED PD
Sbjct: 238 GRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTM-EDEGCGPD 296
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y + L G L + +L +MR K PDLV Y +++
Sbjct: 297 VVTYTVLIDALCAAGKLDKAKELYTKMRASSHK---------------PDLVTYITLMSK 341
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
+ V + ++ G P TY +LV A + GK+++A
Sbjct: 342 FGNYGDLETVKRFWSEMEADGYAPDVVTY------------TILVEALCKSGKVDQAFDM 389
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 443
+ M RG+V Y L L N R +A+ + ++SL + P ++ I
Sbjct: 390 LDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVA-PTAYSYVLFIDYYG 448
Query: 444 DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
G + + F+ MK P+I NA L + +AK++F +
Sbjct: 449 KLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCG------ 502
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
L PD TY+ M++ + A Q + + M GC+ D L+ +A
Sbjct: 503 -------LSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKA 555
Query: 563 GK 564
G+
Sbjct: 556 GR 557
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 136/343 (39%), Gaps = 51/343 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L G QA +LD ++ + + + Y L++ L R EAL +FN M
Sbjct: 373 LVEALCKSGKVDQAFDMLDV---MRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNM- 428
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + P +Y G++G ++ + E+M+++ + P +
Sbjct: 429 ESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRG---------------IMPSIA 473
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
NA L + + + +F + GL P + TY + M+ Y + G
Sbjct: 474 ACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSK------------AG 521
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+I++A + M G V L L GR +A + ++K L+ + P +T+
Sbjct: 522 QIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLA-PTVVTY 580
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
LI G + + +F MK+ C PN T NA+L +ND A ++F T
Sbjct: 581 NILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTI 640
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSML-----EASATAHQWEY 532
N S PD TY++++ E A W Y
Sbjct: 641 MNCS-------------PDVLTYNTIIYGLIKEGRAGYAFWFY 670
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 140/333 (42%), Gaps = 54/333 (16%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
AL++F + +++ P+I Y+ + G+ + EL +L M + K
Sbjct: 807 ALKLF-VEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCK---------- 855
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL------------ 354
P+++ +N +++A V S+ ++ ++ P+ TYG
Sbjct: 856 -----PNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSE 910
Query: 355 -AMESYR-----RC-----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
AM+ + +C + +L+ F + G +N A + M + G+ Y L
Sbjct: 911 EAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILV 970
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-C 462
CL GR DA+ E++K L P +++ +I +++ +S+F MK+
Sbjct: 971 ECLFMTGRVDDAVHYFEELK-LTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGI 1029
Query: 463 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
P + T NA++ + M +A ++FEE F+ L+P+ +TY++++
Sbjct: 1030 SPELYTYNALILHFGNAGMVDQAGKMFEEL--------QFMG-----LEPNVFTYNALIR 1076
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
+ + + V+K M + GC + A L
Sbjct: 1077 GHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 84/423 (19%), Positives = 155/423 (36%), Gaps = 73/423 (17%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
V L+ L KAGR EA ++F L+D L P + Y+ + LG+ G L + + L
Sbjct: 543 IVVNSLIDTLYKAGRVDEAWQMFG-RLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFG 601
Query: 289 RMRQK--PSKRI----------KN--------MHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M++ P + KN M + PD++ YN ++ +
Sbjct: 602 SMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEG 661
Query: 329 QWKGVFWVFKQLRK---------SGLKPSAATYG-------LAMESYRRCLLKV------ 366
+ FW + Q++K L P G + ME + L+
Sbjct: 662 RAGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWG 721
Query: 367 -LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
L+ E +I EA++ + + ++ L LC + DA + +K
Sbjct: 722 ELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKS 781
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSK 484
+ P ++ L+ + + + +F MK+ C PNI T N +L + ++ +
Sbjct: 782 LGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDE 841
Query: 485 AKELFEET-------------------TRANSSG------YTFLSGDGAPLKPDEYTYSS 519
EL+ E ++NS Y +SGD P TY
Sbjct: 842 LFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGD---FSPTPCTYGP 898
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 579
++ A + E +++ M C+ + + L+ +AG ++ F +++ G
Sbjct: 899 LIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEG 958
Query: 580 EIP 582
P
Sbjct: 959 IRP 961
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G G+ A + + + DLKS YT L+ L GR +A+ F L
Sbjct: 934 LINGFGKAGNVNIACDLFKRMIKEGIRPDLKS---YTILVECLFMTGRVDDAVHYFE-EL 989
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKN---MHRKNWDPV 309
+ L PD +Y+ + LG+ L+E + L M+ + P N +H N V
Sbjct: 990 KLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMV 1049
Query: 310 --------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
LEP++ YNA++ S F VFK++ G P+A T+
Sbjct: 1050 DQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 99/274 (36%), Gaps = 68/274 (24%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G +AM + + + D + + +Y L+ GKAG + A +F M+
Sbjct: 899 LIGGLLKAGRSEEAMKIFEE---MPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMI 955
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ + PD+ +Y + L G + + V E ++ L+PD V
Sbjct: 956 KE-GIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTG---------------LDPDTV 999
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN ++N S + + +F +++ G+ P TY L+ F G
Sbjct: 1000 SYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTY------------NALILHFGNAG 1047
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+++A ++ G+ +P T+
Sbjct: 1048 MVDQAGKMFEELQFMGL------------------------------------EPNVFTY 1071
Query: 436 TGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 468
LI G+ D S+F+ M C PN GT
Sbjct: 1072 NALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGT 1105
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
+Y+ + L Q G KE +K+ +RM + L+P + Y+A++ A
Sbjct: 194 SYNGLIYFLLQPGFCKEALKVYKRMISEG---------------LKPSMKTYSALMVALG 238
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
+ + +++ GL+P+ TY + +R G+I++A ++
Sbjct: 239 RRRDTGTIMDLLEEMETLGLRPNIYTY------------TICIRVLGRAGRIDDAYGILK 286
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
ME G Y L LC G+ A + K+++ H KP +T+ L+ +
Sbjct: 287 TMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSH-KPDLVTYITLMSKFGNY 345
Query: 446 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
G ++ + M+ D P++ T +++ ++ +A ++ +
Sbjct: 346 GDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLD 391
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 159/378 (42%), Gaps = 59/378 (15%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR-FVYTK 233
W+F + MN+ G+ ++ + L+K D+G +A+ + + +K+ + S VY
Sbjct: 298 WEFFQRMNRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEM----EKKGISSNAIVYNT 353
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+ K+ R EA +F M + + P A Y+ + + R +
Sbjct: 354 LMDAYSKSNRVEEAEGLFGEM-KAKGVMPTSATYNILMDAYSR--------------RMQ 398
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW-VFKQLRKSGLKPSAATY 352
P + I+N+ + D LEP++ Y +++A + + F +++K G+KP++ +Y
Sbjct: 399 P-EIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSY 457
Query: 353 GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
L+ A+ G +A A NM++ G+ + Y L G
Sbjct: 458 ------------TALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDT 505
Query: 413 QDAM-----LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS-IFQHMKDHCEPNI 466
Q M ++ +KI+ R +TF L+ GH + IF+ K +P +
Sbjct: 506 QTLMKIWKLMLSDKIEGTR------VTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTV 559
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T N ++ Y+R S+ +L +E T N LKPD TYS+M+ A
Sbjct: 560 MTYNMLMNAYARGGQHSRLPQLLKEMTSLN-------------LKPDSITYSTMIYAYVR 606
Query: 527 AHQWEYFEYVYKGMALSG 544
++ + +K M SG
Sbjct: 607 VRDFKRAFFYHKQMVKSG 624
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 42/262 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+YT L+ +L GR EA +F+ M+E PD Y ++ ++G ++ +++E
Sbjct: 319 ILYTSLIDLLFSTGRVPEARHVFDSMIEK-GCAPDALTYGTIIQNFSKIGNVEAAGEILE 377
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M + + PD YN++++ V + F V+ ++ SG+KP+
Sbjct: 378 LMAKSG---------------VGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPN 422
Query: 349 AATYGLAMES-------------YRRCLLK-----------VLVRAFWEEGKINEAVAAV 384
A T+ + M ++ L K +L+ + G+++EA
Sbjct: 423 AVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQF 482
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
+ M RG++ Y L L GR +A +VE + L + ++ ++ LI +D
Sbjct: 483 QEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQ-AYSALITGLID 541
Query: 445 GGHIDDCISIFQH-MKDHCEPN 465
+D +FQ MK C PN
Sbjct: 542 SSMVDTAWDVFQEMMKRGCAPN 563
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 156/401 (38%), Gaps = 46/401 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++KGL D +A + + LK + YT ++ L KAGR + L+ F M
Sbjct: 114 VIKGLADSKRIDEACELFEE---LKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEM- 169
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P Y V L + +L + K+ E+M QK PD +
Sbjct: 170 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCV---------------PDTI 214
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y +++ + + + + G +P+A TYG +V F +
Sbjct: 215 TYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYG------------SIVHGFCKLD 262
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
INEA + M +RG ++ L + GR ++A V+ ++ + R P I +
Sbjct: 263 MINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTA-RGCAPDVILY 321
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
T LI G + + +F M + C P+ T +++ +S+ A E+ E +
Sbjct: 322 TSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK 381
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
SG G PD + Y+S+++ + + VY M SG + +
Sbjct: 382 ---------SGVG----PDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 428
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
L+ + GK F +LE E+P L +LI +
Sbjct: 429 LMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGL 469
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 138/382 (36%), Gaps = 47/382 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ KAG+P ++ N L+ PD+ Y SV + G L
Sbjct: 45 FTTLIHGFCKAGQPQVGHKLLNQALK--RFRPDVFLYTSVIHGYCKAGDLD--------- 93
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + P D++ Y V+ S + +F++L+ +G P+
Sbjct: 94 ---------TGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVV 144
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
Y ++ + G+I + + M V T + Y + LC
Sbjct: 145 AY------------TAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQ 192
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
DA V E++ + P IT+T LI +D+ + M EP T
Sbjct: 193 MLPDACKVFEQMVQ-KGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTY 251
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
+++ + + DM ++AKE+ + +P + ++S+L + +
Sbjct: 252 GSIVHGFCKLDMINEAKEVIAQMRERGC-------------EPGLFIFTSLLSYYLSKGR 298
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
E V M GC D + L+ G+ H FDS++E G P L +
Sbjct: 299 AEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGT 358
Query: 590 MLIQAIVQSNYEKAVALINAMA 611
++ N E A ++ MA
Sbjct: 359 IIQNFSKIGNVEAAGEILELMA 380
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 32/182 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ GL G +A S+ + +K ++ V YT L+ LGKAGR EA F M
Sbjct: 429 LMHGLFKDGKTDRAFSLFKE---MLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEM 485
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ D + P+ Y S+ +L + G + E KL+E M + + PD+
Sbjct: 486 I-DRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLG---------------VNPDV 529
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
Y+A++ + S + VF+++ K G P+ TY KVL R F
Sbjct: 530 QAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTY------------KVLRRGFRAA 577
Query: 375 GK 376
G+
Sbjct: 578 GR 579
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 159/391 (40%), Gaps = 45/391 (11%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L PD+ Y +++ + F VF ++ K G P++ TY L+
Sbjct: 271 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS------------TLIN 318
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
EG+++EA+ + M ++G+ T Y LC ++A+ +V ++K R +
Sbjct: 319 GLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKK-RGCR 377
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+T LI G ++ I ++ M K+ PN T NA++ FS A ++
Sbjct: 378 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 437
Query: 489 FE----ETTRANSSGYT------FLSGD-------------GAPLKPDEYTYSSMLEASA 525
F + AN+ Y L GD PL P TY++++
Sbjct: 438 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL-PTVVTYNTLINGYL 496
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
T + M +GC+ D+ + L+ S+ GK F ++E G P+P+
Sbjct: 497 TKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPV 556
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE--SNEDRISRDKLEKLLN 643
+T ++ + A++L+ M + + + S E+R S + EK+ +
Sbjct: 557 SYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFS--EAEKICD 614
Query: 644 ALCNCNAASSEITVSNLSRALHALCRSEKER 674
+ + IT + L + LCR+ + +
Sbjct: 615 KMAEQGLLPNVITYTTL---IDGLCRNGRTQ 642
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 109/499 (21%), Positives = 198/499 (39%), Gaps = 54/499 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G KG+ A +LD +K+ + Y +L++ K G+ A F M+
Sbjct: 491 LINGYLTKGNVNNAARLLDL---MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 547
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E C L P+ +Y ++ + G + + L+ERM + P++
Sbjct: 548 E-CGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCN---------------PNVE 591
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YNAV+N +++ + ++ + GL P+ TY L+ G
Sbjct: 592 SYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITY------------TTLIDGLCRNG 639
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ A +ME+R + Y L LC G+ +A +++++++ + P E+TF
Sbjct: 640 RTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMER-KGLAPDEVTF 698
Query: 436 TGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAK------EL 488
T LI + G ID + + M D C+PN T + +LK + + + K +
Sbjct: 699 TSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAV 758
Query: 489 FEETTRANSSGYTFLSGDGAPL-----KPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
+ + + +S A + +P TYS+++ ++ E + K M
Sbjct: 759 YSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKER 818
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLE--HA---FDSLLEAGEIPHPLFFTEMLIQAIVQS 598
G D+ + LL+ C LE HA F S+ G H + ++
Sbjct: 819 GFCPDREIYYSLLI-----AHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAG 873
Query: 599 NYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVS 658
E+A AL + M ++ E WT L + D KLL+ + + N + T
Sbjct: 874 QVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYV 933
Query: 659 NLSRALHALCRSEKERDLS 677
L R L + +S + L+
Sbjct: 934 ILGRELSRIGKSIESEPLA 952
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 97/237 (40%), Gaps = 19/237 (8%)
Query: 379 EAVAAVRNMEQR----GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
E V RN+ ++ G+ + + L L G+ ++A L++ +I S P T
Sbjct: 219 EMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLS-PDVFT 277
Query: 435 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+T LI+ ++D +F M K+ C+PN T + ++ +A ++ EE
Sbjct: 278 YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI 337
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
++P YTY+ + A E + M GC+ + +
Sbjct: 338 EKG-------------IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT 384
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L+ SR GK + + +L+ G +P+ + + ++ + V + A+ + + M
Sbjct: 385 ALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 441
>gi|15230719|ref|NP_187294.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207273|sp|Q9SQU6.1|PP216_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g06430, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2750; Flags: Precursor
gi|6437546|gb|AAF08573.1|AC011623_6 unknown protein [Arabidopsis thaliana]
gi|20466300|gb|AAM20467.1| unknown protein [Arabidopsis thaliana]
gi|30387593|gb|AAP31962.1| At3g06430 [Arabidopsis thaliana]
gi|332640870|gb|AEE74391.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 486
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 160/407 (39%), Gaps = 85/407 (20%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR-FVYTKLLAILGKAGRPHEALRIFNLML 255
L L K W QA+ V D L+++ + + Y KLL +LGK+G+P+ A ++F+ ML
Sbjct: 95 LSDLIAKKQWLQALEVFDM---LREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEML 151
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ L P + Y ++ + L+ + ++++M+ P +PD+
Sbjct: 152 EE-GLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQ--------------CQPDVF 196
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y+ +L ACV + Q+ V ++K++ + + P+ T + + Y R G
Sbjct: 197 TYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRV------------G 244
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ ++ + +M +V TA C W
Sbjct: 245 RFDQMEKVLSDM----LVSTA----------CKPDVW----------------------- 267
Query: 436 TGLIISSMDG--GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T II S+ G G ID S ++ ++ EP T N ++ Y + M+ K + E
Sbjct: 268 TMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYM 327
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
+ T TY++++EA A + E + M G + D
Sbjct: 328 RKLEFPWTT-------------STYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTF 374
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
L+ + AG H + + L EIP F +I A +++
Sbjct: 375 CCLINGYANAGLFHKVISSV-QLAAKFEIPENTAFYNAVISACAKAD 420
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 97/240 (40%), Gaps = 39/240 (16%)
Query: 361 RCLL--------KVLVRAFWEEGK-------INEAVAAVRNMEQR--------GVVGTAS 397
RC+L V + W++G+ +N+ ++N++++ G V T +
Sbjct: 33 RCVLAASKSSPGSVTKKRLWKDGEFPGITEPVNQRRTPIKNVKKKLDRRSKANGWVNTVT 92
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
E L +W A+ V + ++ +P E T+ L++ G + +F
Sbjct: 93 ---ETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDE 149
Query: 458 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
M ++ EP + A+L Y+R+++ A + ++ +PD +T
Sbjct: 150 MLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQC------------QPDVFT 197
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
YS++L+A A Q++ + +YK M + +L R G+ +E +L
Sbjct: 198 YSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDML 257
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 150/394 (38%), Gaps = 53/394 (13%)
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
NL P Y+S+ Q G ++ + L+ +M ++ + +L +Y
Sbjct: 231 NLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEG---------------FQGNLGLYT 275
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC---------------- 362
VLN + F +L+ GL P+AATYG ++ + +
Sbjct: 276 TVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKH 335
Query: 363 -------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+ +++ + G A +M G+ Y L C GR A
Sbjct: 336 GVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKA 395
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLK 474
+ V+E I++ R +E T+T ++ + GGHI + +F +K P + + N++L
Sbjct: 396 LGVLENIQANRLLPTIE-TYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLS 454
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
++ A+ + +E AN + P+E +Y+++ E A A E
Sbjct: 455 GLAKARQMENARLMLDEML-ANG------------VVPNERSYTALTEGYARAGDVEKAF 501
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 594
+++ M +D + LL ++G F + +AG + + + ML
Sbjct: 502 GMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGW 561
Query: 595 IVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
+ KA L+ M FH+ +T ++
Sbjct: 562 ARKGELSKARDLLKDMQKHGFHLDTICYTSFIKA 595
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 139/369 (37%), Gaps = 76/369 (20%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT +L + + L F+ L+ C L P A Y + + G + + + ++E
Sbjct: 273 LYTTVLNGFAEIRDEEKCLSFFH-RLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEE 331
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + + P+ ++Y +++ + F V++ + +GLKP
Sbjct: 332 MDKHG---------------VSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDI 376
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY +LV AF + G++++A+ + N++ ++ T Y +
Sbjct: 377 VTY------------NILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKG 424
Query: 410 GRWQDAMLVVEKIKS--LRHSK--------------------------------PLEITF 435
G Q A+ V ++IK+ LR P E ++
Sbjct: 425 GHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSY 484
Query: 436 TGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
T L G ++ +FQ MK ++ +I A+LK ++ +A E+F++ T
Sbjct: 485 TALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITD 544
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
A LK + TY +ML+ A + + K M G LD +
Sbjct: 545 AG-------------LKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTS 591
Query: 555 LLVEASRAG 563
+ R+G
Sbjct: 592 FIKACFRSG 600
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 116/268 (43%), Gaps = 40/268 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L G G ++A+ V D + + + S Y LL+ L KA + A + + ML
Sbjct: 417 ILDGYVKGGHIQKALEVFDRIKTAGLRPGVVS---YNSLLSGLAKARQMENARLMLDEML 473
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + P+ +Y ++ + G +++ + +RM+++ L D+V
Sbjct: 474 AN-GVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKEN---------------LAIDIV 517
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y A+L AC S + VF+Q+ +GLK + TY ++ + R +G
Sbjct: 518 AYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWAR------------KG 565
Query: 376 KINEAVAAVRNMEQRGV-VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI- 433
++++A +++M++ G + T + C R D V E + +R K LE+
Sbjct: 566 ELSKARDLLKDMQKHGFHLDTICYTSFIKACF----RSGDTEEVTETLAVMREKK-LEVN 620
Query: 434 --TFTGLIISSMDGGHIDDCISIFQHMK 459
T+T LI + D IS ++ K
Sbjct: 621 ARTYTTLIHGWLAAADPDQAISCYEQAK 648
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/396 (20%), Positives = 167/396 (42%), Gaps = 56/396 (14%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
RQ V D V +++K L + ++ +A + EA+ FN+M E N+ P++AA
Sbjct: 70 RQYQMVWDLVNAMRNKEILNVE-AFCIIMRKYARAQKVEEAVYTFNVM-EKYNMKPNVAA 127
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQK--PSKRI-----------------KNMHRKNWD 307
++ + L + +++ ++ + M+ + P + + ++R+ D
Sbjct: 128 FNGLLSALCKSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGWGRAPNLPKAREIYREMID 187
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
PD V Y+ +++ + + + K++ + KPS+ Y VL
Sbjct: 188 SGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYS------------VL 235
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
V + E +I +AV+ ME+ GV+ + Y L C + ++ V++ + L+
Sbjct: 236 VHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDM-DLKG 294
Query: 428 SKPLEITFTGLIISSMDG-GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
P T +II+S+ G G D+ IF+ M CEP++ + ++K++ A
Sbjct: 295 VNPNSRT-CNIIINSLIGRGETDEAFKIFRRMIKVCEPDVDSYTMIIKMFCGRKELDMAL 353
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE-----ASATAHQWEYFEYVYKGMA 541
++++ + P +T+S ++ +AT E + KG+
Sbjct: 354 KIWKYMKKKQ-------------FVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIR 400
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
SG + +H LL++ R L+ + L++
Sbjct: 401 PSGATFGRLRH--LLIKEGRKDVLKFLQEKMNLLVK 434
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/393 (19%), Positives = 164/393 (41%), Gaps = 55/393 (13%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K + + + YT ++ +G+ G+ EA+ +FN M+ + L ++ Y+++ L +
Sbjct: 261 MKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITE-GLTLNVVGYNTLMQVLAKGK 319
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW---KGVFW 335
++ + +++ RM + + P+ Y+ VLN V Q G+
Sbjct: 320 MVDKAIQVFSRMVETGCR---------------PNEYTYSLVLNLLVAEGQLVRLDGIVE 364
Query: 336 VFKQLRKSG----LKPSAATYGLAMESYR-------------RCLLKVLVRAFWEEGKIN 378
+ K+ G L + + G E++R R ++ + GK
Sbjct: 365 ISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTI 424
Query: 379 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
EA+ + + ++GVV +Y + L G+ + + + + ++ P FT
Sbjct: 425 EAIEMLSKIHEKGVVTDTMMYNTVFSAL---GKLKQISHIHDLFEKMKKDGPSPDIFTYN 481
Query: 439 IISSMDG--GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
I+ S G G +D+ I+IF+ + + C+P+I + N+++ +N +A F+E
Sbjct: 482 ILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK 541
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
L PD TYS+++E + E +++ M + GCQ + + L
Sbjct: 542 G-------------LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNIL 588
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
L ++G+ + + + G P + +T
Sbjct: 589 LDCLEKSGRTAEAVDLYTKMKQQGLTPDSITYT 621
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 30/200 (15%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYP 262
G +Q + D +K F Y L++ G+ G EA+ IF L DC P
Sbjct: 453 GKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCK--P 510
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
DI +Y+S+ LG+ G + E R K M K L PD+V Y+ ++
Sbjct: 511 DIISYNSLINCLGKNGDVDE-----------AHVRFKEMQEKG----LNPDVVTYSTLME 555
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA 382
+ + + + +F+++ G +P+ TY + ++ CL K G+ EAV
Sbjct: 556 CFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLD----CLEK--------SGRTAEAVD 603
Query: 383 AVRNMEQRGVVGTASVYYEL 402
M+Q+G+ + Y L
Sbjct: 604 LYTKMKQQGLTPDSITYTVL 623
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 159/391 (40%), Gaps = 45/391 (11%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L PD+ Y +++ + F VF ++ K G P++ TY L+
Sbjct: 229 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTY------------STLIN 276
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
EG+++EA+ + M ++G+ T Y LC ++A+ +V ++K R +
Sbjct: 277 GLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKK-RGCR 335
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+T LI G ++ I ++ M K+ PN T NA++ FS A ++
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395
Query: 489 FE----ETTRANSSGYT------FLSGD-------------GAPLKPDEYTYSSMLEASA 525
F + AN+ Y L GD PL P TY++++
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL-PTVVTYNTLINGYL 454
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
T + M +GC+ D+ + L+ S+ GK F ++E G P+P+
Sbjct: 455 TKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPV 514
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE--SNEDRISRDKLEKLLN 643
+T ++ + A++L+ M + + + S E+R S + EK+ +
Sbjct: 515 SYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS--EAEKICD 572
Query: 644 ALCNCNAASSEITVSNLSRALHALCRSEKER 674
+ + IT + L + LCR+ + +
Sbjct: 573 KMVEQGLLPNVITYTTL---IDGLCRNGRTQ 600
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/382 (18%), Positives = 153/382 (40%), Gaps = 43/382 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L++ L + G+ A+ +++ ML++ L P+ Y+++ L G +K+ M
Sbjct: 341 YTALISGLSRLGKLEVAIGLYHKMLKE-GLVPNTVTYNALINELCVGGRFSTALKIFHWM 399
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
S + N YN ++ + +F+++ K G P+
Sbjct: 400 EGHGS--LANTQ-------------TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 444
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY L+ + +G +N A + M++ G Y EL G
Sbjct: 445 TY------------NTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
+ + A +++ + P +++T LI G +D +S+ + M++ C PN+ +
Sbjct: 493 KLESASFYFQEMVECGLN-PNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESY 551
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
NA++ S+ + FS+A+++ ++ L P+ TY+++++ +
Sbjct: 552 NAVINGLSKENRFSEAEKICDKMVEQG-------------LLPNVITYTTLIDGLCRNGR 598
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
++ ++ M C + ++ L+ + GK E + G P + FT
Sbjct: 599 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTS 658
Query: 590 MLIQAIVQSNYEKAVALINAMA 611
++ +V + A L+ M
Sbjct: 659 LIDGFVVLGRIDHAFLLLRRMV 680
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 97/237 (40%), Gaps = 19/237 (8%)
Query: 379 EAVAAVRNMEQR----GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
E V RN+ ++ G+ + + L L G+ ++A L++ +I S P T
Sbjct: 177 EMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLS-PDVFT 235
Query: 435 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+T LI+ ++D +F M K+ C+PN T + ++ +A ++ EE
Sbjct: 236 YTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI 295
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
++P YTY+ + A E + M GC+ + +
Sbjct: 296 EKG-------------IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYT 342
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L+ SR GK + + +L+ G +P+ + + ++ + V + A+ + + M
Sbjct: 343 ALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 399
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 127/337 (37%), Gaps = 77/337 (22%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L G + A+ + W+ G L + Y +++ L G +A+ +F ML
Sbjct: 379 LINELCVGGRFSTALKIFHWMEG---HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ L P + Y+++ G + +L++ M++ EPD
Sbjct: 436 KMGPL-PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGC---------------EPDEW 479
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR--------CLLK-- 365
YN +++ + + + F+++ + GL P+ +Y ++ + + LLK
Sbjct: 480 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539
Query: 366 -------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
++ +E + +EA M ++G++ Y L LC NGR
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599
Query: 413 QDAMLV---VEKIKSL-------------------------------RHSKPLEITFTGL 438
Q A + +EK K L + P E+TFT L
Sbjct: 600 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 659
Query: 439 IISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 474
I + G ID + + M D C+PN T + +LK
Sbjct: 660 IDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLK 696
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 180/474 (37%), Gaps = 73/474 (15%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
++ IM Q G E L+ GL + G +A+ + + + + YT L
Sbjct: 249 YEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFA---DMTEDNCCPTVRTYTVL 305
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L +GR EAL +FN M E P++ Y + L + + E K++ M +K
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEK-GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-- 352
L P +V YNA+++ F + + + P+ TY
Sbjct: 365 ---------------LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409
Query: 353 ---GL--------AMESYRRCLLKVLVRAFWE-------EGKINEAVAAVRN---MEQRG 391
GL AM + L + L + + K+N+ +A R M + G
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
+V Y LC GR ++A + + +K+ + K E+ +T LI G ID
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKA-KGVKANEVIYTALIDGYCKVGKIDVA 528
Query: 452 ISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFLSG- 505
S+ + M D C PN T N +++ + +A L + + YT L G
Sbjct: 529 YSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGE 588
Query: 506 ---DGA--------------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
DGA +PD TY++ L A + E + V M G D
Sbjct: 589 MLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPD 648
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFD---SLLEAGEIPHPLFFTEMLIQAIVQSN 599
+ L+ +R G H AFD +++ G P L+ +LI+ + N
Sbjct: 649 LVTYTVLIDGYARLGLTH---RAFDFLKCMVDTGCKP-SLYIVSILIKNLSHEN 698
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 160/401 (39%), Gaps = 48/401 (11%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
EK VL+D L + + K + M++ GL+ + L+ G +G
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
A +LD + + ++ Y +L+ L K + H+A+ + N MLE L P + Y
Sbjct: 387 DAFEILDLMESNSCGPNTRT---YNELICGLCKKRKVHKAMALLNKMLER-KLSPSLITY 442
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+S+ +V L+ +L+ M + L PD Y+ ++
Sbjct: 443 NSLIHGQCKVNDLESAYRLLSLMNENG---------------LVPDQWTYSVFIDTLCKE 487
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ + +F ++ G+K + Y L+ + + GKI+ A + + M
Sbjct: 488 GRVEEAGTLFDSVKAKGVKANEVIY------------TALIDGYCKVGKIDVAYSLLERM 535
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+ + Y L LC + ++A +V K+ ++ KP +T+T LI + G
Sbjct: 536 LNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTM-GVKPTVVTYTILIGEMLKDGA 594
Query: 448 IDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
D + +F HM +P++ T A L Y M + ++ + N G
Sbjct: 595 FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVI---AKMNEEG------- 644
Query: 507 GAPLKPDEYTYSSMLEASA-TAHQWEYFEYVYKGMALSGCQ 546
+ PD TY+ +++ A F+++ K M +GC+
Sbjct: 645 ---ILPDLVTYTVLIDGYARLGLTHRAFDFL-KCMVDTGCK 681
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 150/407 (36%), Gaps = 60/407 (14%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L +AGR +EAL++F M ED N P + Y + L G E + L M
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTED-NCCPTVRTYTVLIYALSGSGRKVEALNLFNEM 325
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++K EP++ Y +++ ++ + ++ + GL PS
Sbjct: 326 KEKGC---------------EPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVV 370
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY L+ + +EG I++A + ME Y EL C LC
Sbjct: 371 TY------------NALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKR 418
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
+ AM ++ K+ R P IT+ LI ++ + M ++ P+ T
Sbjct: 419 KVHKAMALLNKMLE-RKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTY 477
Query: 470 NAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFLSGDGA----------------- 508
+ + + +A LF+ +AN YT L DG
Sbjct: 478 SVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI-DGYCKVGKIDVAYSLLERML 536
Query: 509 --PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
P+ YTY+ ++E + + + M G + + L+ E + G
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGA-- 594
Query: 567 LLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+HA F+ ++ G P +T L Q E+ +I M
Sbjct: 595 -FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM 640
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 108/268 (40%), Gaps = 60/268 (22%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL + ++A S++ + + K + YT L+ + K G AL++FN M+
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVK---PTVVTYTILIGEMLKDGAFDHALKVFNHMV 606
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
PD+ Y + G+L+E+ +I +M N + +L PDLV
Sbjct: 607 -SLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM--------------NEEGIL-PDLV 650
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS--------------------------- 348
Y +++ F K + +G KPS
Sbjct: 651 TYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGID 710
Query: 349 ----AATYGLAMESYRR-----CLLKV-----LVRAFWEEGKINEAVAAVRNMEQRGVVG 394
Y +A++ + + C + V L+ F ++ ++ EA V +M++RG+
Sbjct: 711 SVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSP 770
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKI 422
+ +Y L C C G + +A+ +V+ +
Sbjct: 771 SEDIYNSLLDCCCKLGVYAEAVRLVDAM 798
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 115/559 (20%), Positives = 210/559 (37%), Gaps = 96/559 (17%)
Query: 106 DNLKRENLREL----KEMFEKDLNWVLDD-------DVQLGSDYFAKNVEWHPEKRWRSE 154
D + E LRE+ KE+ K LN ++ +V L K+ + P + +
Sbjct: 187 DRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNA 246
Query: 155 AEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
+ + D+L ++ R M++ GL E + + L G WR+A+S+++
Sbjct: 247 LVQVFLRADKLDTAQLVH------REMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE 300
Query: 215 WVYGLKDKRD-LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV--- 270
K D + + +Y K+++ L +A EA+ N M + P++ Y +
Sbjct: 301 -------KEDFVPNTILYNKMISGLCEASFFEEAMDFLNRM-RSTSCIPNVQTYRILLCG 352
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKN-----------------MHRKNWDPVLEPD 313
+ Q+G K ++ ++ PS I N + +K +P
Sbjct: 353 CLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPG 412
Query: 314 LVVYNAVLNACVPSHQWKG--VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
VVYN ++ + + G F + ++ L + + S+ RCL
Sbjct: 413 YVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF----- 467
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
GK +A + M G V S Y E+ LCN R ++A + +++K P
Sbjct: 468 ---GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKG-TGVVPD 523
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
T+T LI G I + M +D CEP + T ++ Y + S A ELFE
Sbjct: 524 VYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 583
Query: 491 E-----------TTRANSSGYT---------------------------FLSGDGAPLKP 512
T A GY F + KP
Sbjct: 584 LMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKP 643
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
+ TY ++++ AH+ + + + M + GC+ + + L+ +A K + F
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703
Query: 573 DSLLEAGEIPHPLFFTEML 591
++E G P+ ++ ++
Sbjct: 704 HKMVERGYNPNVYTYSSLI 722
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 88/476 (18%), Positives = 171/476 (35%), Gaps = 102/476 (21%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M +G + + ++ + L G + +A V+ + G D + Y++++ L
Sbjct: 445 MLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTST---YSEVIGFLCN 501
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
A R A +F M + + PD+ Y + + G++K+ ++ M +
Sbjct: 502 ASRVENAFFLFKEM-KGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGC----- 555
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
EP +V Y +++A + + + +F+ + G P+ TY
Sbjct: 556 ----------EPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITY-------- 597
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
L+ + + G I +A M + +Y+
Sbjct: 598 ----TALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYF-------------------- 633
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 479
KIK+ KP +T+ L+ + D + + M D CEPN +A++ + +
Sbjct: 634 KIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKA 693
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS-------------------- 519
+A+E+F + GY P+ YTYSS
Sbjct: 694 AKLDEAQEVFHKMVE---RGYN----------PNVYTYSSLIDRLFKDKRLDLVLKVLSK 740
Query: 520 MLEASATAHQWEYFEYV------------YKGMAL---SGCQLDQTKHAWLLVEASRAGK 564
MLE S + Y E + YK M + GC+ + + ++ +AGK
Sbjct: 741 MLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGK 800
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM--AYAPFHIT 618
F + G P+ + +T ++ + ++A AL+ M Y P H++
Sbjct: 801 VDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVS 856
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 102/246 (41%), Gaps = 32/246 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT+++ L K + EA ++ LM+E+ P++ Y ++ G+ G + + ++L
Sbjct: 752 IYTEMIDGLSKVAKTDEAYKLM-LMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFRE 810
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K P+ V Y ++N C + + + ++++++
Sbjct: 811 MGSKGCA---------------PNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHV 855
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
++Y +E Y+R +L EE +E+ G T +Y L
Sbjct: 856 SSYCKVIEGYKREF--ILSLGLLEE------------VEKNGSAPTILLYKVLIDNFVKA 901
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEIT-FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
GR + A+ + +++ S S + +T LI S ID +F M +D P++G
Sbjct: 902 GRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLG 961
Query: 468 TVNAML 473
T +L
Sbjct: 962 TFVHLL 967
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/325 (18%), Positives = 116/325 (35%), Gaps = 38/325 (11%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N ++ C + W +L+ G KP+ TY LV+ F K+
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTY------------NALVQVFLRADKL 257
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+ A R M + G+ A LC G+W++A+ ++EK P I +
Sbjct: 258 DTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK----EDFVPNTILYNK 313
Query: 438 LIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
+I + ++ + M+ C PN+ T +L + K +
Sbjct: 314 MISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRIL------- 366
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ + +G P ++S++ A + + Y + K M C+ + L+
Sbjct: 367 ----SMMIAEGC--YPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILI 420
Query: 557 VEASRAGKC------HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
G+ L E A++ +L AG + + + +EKA +I+ M
Sbjct: 421 GSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEM 480
Query: 611 AYAPFHITERQWTEL--FESNEDRI 633
F ++E+ F N R+
Sbjct: 481 MGNGFVPDTSTYSEVIGFLCNASRV 505
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 150/376 (39%), Gaps = 43/376 (11%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
KA + +AL F M E + P+ Y+ V L + L + ++++ MR S
Sbjct: 19 KANQLKQALACFEKMRE--FVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKS---- 72
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
+ PDLV Y+ V+N C + + + + + G+ P TY
Sbjct: 73 ----------VAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTY------ 116
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
+V +GK++ A VR M+ +GV + L CN + +A+ +
Sbjct: 117 ------TSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKL 170
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 477
++I + KP +T+T LI G+++ + + M+ C PN+ T +++L
Sbjct: 171 YKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLC 230
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+ +A +LF R S G P+ TY++++ AH+ + +
Sbjct: 231 KAGDLDQALDLFR---RMTSKGCV----------PNVVTYTTLIHGLCAAHKVDAARLLM 277
Query: 538 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 597
M + C D + LL R G+ + F + +P + +T ++
Sbjct: 278 DEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNA 337
Query: 598 SNYEKAVALINAMAYA 613
S E+A L+ M A
Sbjct: 338 SRLEEARFLLENMKTA 353
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/411 (18%), Positives = 148/411 (36%), Gaps = 103/411 (25%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ K+G +A+++ +M E P++ Y S+ L + G L + + L RM
Sbjct: 187 YTALIDGFCKSGNLEKAMKMLGVM-EGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM 245
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K P++V Y +++ +H+ + ++ + P
Sbjct: 246 TSKGCV---------------PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTV 290
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+Y ++ Y R G+I EA + M + + Y L CN
Sbjct: 291 SYNALLDGYCR------------LGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNAS 338
Query: 411 RWQDAMLVVEKIKS-----------------------------------LRHSKPLEITF 435
R ++A ++E +K+ R+ P +T+
Sbjct: 339 RLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTY 398
Query: 436 TGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
+ LI G +D + + ++M + EP++GT N+++ R +A +L
Sbjct: 399 SSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLL----- 453
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ----WEYFEYV-------------- 536
++ G L+P TY+++LE + + +E FE +
Sbjct: 454 ------VAMAAHG--LEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLV 505
Query: 537 ----YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH----AFDSLLEAG 579
+ + C+ + A +VE R+ +C E D LL AG
Sbjct: 506 PEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAG 556
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 153/385 (39%), Gaps = 70/385 (18%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+F ++ L+ A + EAL+++ +L + PD+ Y ++ + G L++ +K++
Sbjct: 148 KFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKML 207
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
M + P++V Y+++L+ + +F+++ G P
Sbjct: 208 GVMEGRKCV---------------PNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVP 252
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ TY L+ K++ A + M Y L C
Sbjct: 253 NVVTY------------TTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYC 300
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC--EPN 465
GR ++A + +++ + + P IT+T L+ + +++ + ++MK +P+
Sbjct: 301 RLGRIEEAKQLFKEMAT-KSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 359
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T + ++ YSR F +A E +E N + P+ TYSS+++
Sbjct: 360 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARN-------------VAPNAVTYSSLIDGLC 406
Query: 526 TAHQWEYFEYVYKGM-------------ALSG--CQLDQTKHAWLLVEASRAGKCHLLEH 570
A + ++ V K M ++ G C+L AW L+ A A H LE
Sbjct: 407 KAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAA---HGLEP 463
Query: 571 A---FDSLLEA------GEIPHPLF 586
+ +LLE EI + LF
Sbjct: 464 GMVTYTTLLEGFSRTGRMEIAYELF 488
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 121/293 (41%), Gaps = 45/293 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y L+ L KAGR EA ++ M PD+ AY S L + G + + +++E
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKAS-GCAPDVVAYSSFVYGLCKSGKVLDAHQVLE 246
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS---GL 345
+MR D +P++V YN +L+ S + + +Q+ S GL
Sbjct: 247 QMR---------------DSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL 291
Query: 346 KP---SAATYGLA-----------MESYRR--CLLKV-----LVRAFWEEGKINEAVAAV 384
S GL ME+ R C V LV + GKI EAV AV
Sbjct: 292 NVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAV 351
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI----KSLRHSKPLEITFTGLII 440
R M G A Y L LC+ GR +A +VE++ H P T+ LI
Sbjct: 352 REMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIG 411
Query: 441 SSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
G IDD + FQ M+ C+P+ + + +++ +R+ +A+ + E
Sbjct: 412 GLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 160/390 (41%), Gaps = 57/390 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ L+ K GRP + R+ M ++ P++ +Y+ GLL+ L KL E
Sbjct: 11 VTFNALVNGFSKQGRPGDCERLLETMAAR-DIQPNVVSYN---------GLLEGLCKL-E 59
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
R + + +++M + PD+V Y+ +L+ + + + + K++ GL+P
Sbjct: 60 RWHEA-EELVRDMISRGGRST--PDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPD 116
Query: 349 AATYGLAMESYRR------------------CL-----LKVLVRAFWEEGKINEAVAAVR 385
A Y + S + C L+ E + A + ++
Sbjct: 117 ALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQ 176
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M GV Y L LC GR Q+A ++E++K+ P + ++ +
Sbjct: 177 KMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKA-SGCAPDVVAYSSFVYGLCKS 235
Query: 446 GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G + D + + M+D H +PN+ T N +L ++ A E+ E+ ++ G +
Sbjct: 236 GKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVG 295
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
YS++++ + + V + MA +GC+ D ++ L+ +AGK
Sbjct: 296 ------------YSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGK 343
Query: 565 CHLLEHAFDSLLEA---GEIPHPLFFTEML 591
+E A +++ E G P+ + + ++
Sbjct: 344 ---IEEAVEAVREMAMEGCKPNAVTYCSLV 370
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 124/304 (40%), Gaps = 38/304 (12%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D+ Y+++ L + G L+E +L+ERM+ PD+V Y++ +
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCA---------------PDVVAYSSFVY 230
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA 382
S + V +Q+R S P+ TY ++ + GKI+ A+
Sbjct: 231 GLCKSGKVLDAHQVLEQMRDSHHDPNVVTY------------NTILDGLCKSGKIDTALE 278
Query: 383 AVRNMEQRGVVGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
+ M G V Y LC GR Q+A V+E + + +P +T++ L+
Sbjct: 279 MMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAM-ARAGCRPDVVTYSSLVNG 337
Query: 442 SMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
G I++ + + M + C+PN T +++ ++A+ + EE + G+
Sbjct: 338 LCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGH 397
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
P TY++++ A + + ++ M GC D ++ ++ +
Sbjct: 398 H--------CPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLA 449
Query: 561 RAGK 564
R+G+
Sbjct: 450 RSGR 453
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 96/247 (38%), Gaps = 15/247 (6%)
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P +TF L+ G DC + + M +PN+ + N +L+ + + + +A+EL
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+ + G PD TYS++L A + E + K + G + D
Sbjct: 68 VRD-----------MISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPD 116
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+ ++ ++ + + ++ AG P + F ++ + N E A +L+
Sbjct: 117 ALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQ 176
Query: 609 AMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALC 668
MA + + L + + E+LL + A+ V S ++ LC
Sbjct: 177 KMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM---KASGCAPDVVAYSSFVYGLC 233
Query: 669 RSEKERD 675
+S K D
Sbjct: 234 KSGKVLD 240
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/432 (18%), Positives = 170/432 (39%), Gaps = 47/432 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ G G +A LD LK + K V + L+ L K R +AL +F M
Sbjct: 17 LIAGYCKAGDGDRA---LDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEM 73
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
L L D+ +++ ++G+L++ +L+ M D+
Sbjct: 74 L-GAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAH---------------AFVLDV 117
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
Y+ +++A + + VF ++K+G P Y VL+ ++
Sbjct: 118 FTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVY------------NVLISCLGKQ 165
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
GK++EA+ + +M ++G++ Y + L + GR++ A +K +HS P +T
Sbjct: 166 GKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHS-PDVVT 224
Query: 435 FTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+ L+ D+ +F M+ + C P++ T ++ ++ + ++ E++
Sbjct: 225 YNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKA---GRMEDALEQSA 281
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
R G+ P+ Y Y++++ + Q + +++ M C D +
Sbjct: 282 RLVKMGHV----------PNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYT 331
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 613
L++ SR G + ++ G P + ++ + E A L M
Sbjct: 332 ILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAK 391
Query: 614 PFHITERQWTEL 625
F+ + ++ L
Sbjct: 392 GFNPDMQTYSAL 403
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 157/397 (39%), Gaps = 77/397 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G QA +LD + K D+ +++ L+ L + GR EAL F M
Sbjct: 5 VINGFCKAGQVDQAFELLDEMKERGVKMDV---LLHSTLIQGLCRKGRIDEALEQFKSMG 61
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+C+ P++ Y++V L + + E ++L + M KR + H EPD++
Sbjct: 62 EECS--PNVITYNTVVNGLCKANRIDEGLELFDDME----KRYEASHG------CEPDVI 109
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y+ V++A + + + FK++R G P+ TY L+ +
Sbjct: 110 SYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTY------------SSLIDGLCKVD 157
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+++EA + + ++ +V A +YY VV K R KP E
Sbjct: 158 RVDEAYSLLMQLKGEDMVPRA-MYYN---------------AVVNGFK--RQGKPSE--- 196
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
C+ + HMK+ NI NAML +ND KA + FE +
Sbjct: 197 ---------------CLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLK 241
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
+ KP+ TY+ + A + + + M S D ++
Sbjct: 242 SGK-------------KPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSS 288
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
++ +AG+ + F ++ IPHP+ F +L
Sbjct: 289 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLL 325
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 90/488 (18%), Positives = 174/488 (35%), Gaps = 88/488 (18%)
Query: 148 EKRWRS----EAEAIR--VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLG 201
EKR+ + E + I ++D L + + K +++ + M G L+ GL
Sbjct: 95 EKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLC 154
Query: 202 DKGSWRQAMSVLDWVYGLKDKRDLKSR-FVYTKLLAILGKAGRPHEALRI---------- 250
+A S+L + G D+ R Y ++ + G+P E L +
Sbjct: 155 KVDRVDEAYSLLMQLKG----EDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFG 210
Query: 251 -----FNLML----------EDCNLY---------PDIAAYHSVAVTLGQVGLLKELVKL 286
FN ML + C + P++ Y+ L + G + E ++
Sbjct: 211 INIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRI 270
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ M + + PD++ Y+++++ + + VF ++
Sbjct: 271 LLEMVESK---------------VTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECI 315
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P T+ L+ F E K EA +M G + Y L C+
Sbjct: 316 PHPVTF------------MTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCV 363
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 465
C + A+ + K+K + +P T+ LI +D+ M+ D+ PN
Sbjct: 364 CGADSVESALEIYHKMKR-KKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPN 422
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG----------YTFLSGDGAPLKPDEY 515
+A+++V + +A + + +G L G ++PDE
Sbjct: 423 GAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKG----VRPDEA 478
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
TY ++L + + + ++ MA GC + L+ EA A F+++
Sbjct: 479 TYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAM 538
Query: 576 LEAGEIPH 583
+ AG P
Sbjct: 539 VAAGFTPQ 546
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 122/277 (44%), Gaps = 32/277 (11%)
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPN 465
C G+ A +++++K R K + + LI G ID+ + F+ M + C PN
Sbjct: 9 FCKAGQVDQAFELLDEMKE-RGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPN 67
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T N ++ + + + ELF++ + + + +PD +YS++++A
Sbjct: 68 VITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHG--------CEPDVISYSTVIDALC 119
Query: 526 TAHQWE-YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL--LEHAFDSLLE-AGE- 580
A + + +EY +K M GC + ++ L+ G C + ++ A+ L++ GE
Sbjct: 120 KAQRVDKAYEY-FKRMRAVGCAPNVVTYSSLI-----DGLCKVDRVDEAYSLLMQLKGED 173
Query: 581 -IPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT----ELFESNEDRISR 635
+P +++ ++ Q + + L+ M F I + L++++E +
Sbjct: 174 MVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKAC 233
Query: 636 DKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEK 672
E+LL + + V + A+H LC++ K
Sbjct: 234 QFFERLLK-------SGKKPNVVTYNVAVHGLCKAGK 263
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/454 (19%), Positives = 181/454 (39%), Gaps = 67/454 (14%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G + AM + + +K ++ + + FVY L+ L K R +A ++F M NL P+
Sbjct: 80 GDLKLAMELFET---MKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVR-NLVPN 135
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
++++ + G + + L ERM+++ +EP ++ +N++L+
Sbjct: 136 RVTFNTLIDGYCKAGEVDVAIGLRERMKKEK---------------VEPSIITFNSLLSG 180
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATY--------------GLAMESYRRCLLK---- 365
+ + + + +++ +G P TY G A++ YR + K
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240
Query: 366 ------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
+L+ +EGK+ +A ++++ + G+V +Y + C G A+L +
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTI 300
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 478
E+++S R +P I F +I + ID + M P++ T N ++ Y R
Sbjct: 301 EQMES-RGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGR 359
Query: 479 NDMFSKAKELFEET----TRANSSGY----TFLSGDGAPLK--------------PDEYT 516
+FS+ ++ EE + N Y L DG L+ P+
Sbjct: 360 LCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANI 419
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
Y+ +++ S T + + M+ +G + L+ + GK E F +
Sbjct: 420 YNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLIT 479
Query: 577 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
G P + + ++ N +K + L M
Sbjct: 480 STGHCPDVITYNSLISGYSNAGNSQKCLELYETM 513
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 126/306 (41%), Gaps = 38/306 (12%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P ++ + V S ++ V +FK++ G +P YG AM A
Sbjct: 29 PSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAM------------LAA 76
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ G + A+ M++R VV VY L LC R +DA + ++ S+R+ P
Sbjct: 77 VKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEM-SVRNLVPN 135
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+TF LI G +D I + + M K+ EP+I T N++L + +A+ +
Sbjct: 136 RVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLN 195
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA------SATAHQWEYFEYVYKGMALSG 544
E +G+ PD +TYS + + A A Y E + KG+
Sbjct: 196 EI---KCNGFV----------PDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGV---- 238
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
++D + LL + GK E SL+E G +P + + ++ + ++A+
Sbjct: 239 -KIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAI 297
Query: 605 ALINAM 610
I M
Sbjct: 298 LTIEQM 303
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 168/414 (40%), Gaps = 69/414 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + LL L K G+ +A + ++E L P Y+++ Q+G + + IE
Sbjct: 243 YTCSILLNGLCKEGKVEKAEEVLKSLVEH-GLVPGEVIYNTIVNGYCQIGDMDRAILTIE 301
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKP 347
+M + L P+ + +N+V++ C K WV K + K G+ P
Sbjct: 302 QMESRG---------------LRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGK-GIAP 345
Query: 348 SAATYGLAMESYRR-CLLK----------------------VLVRAFWEEGKINEAVAAV 384
S TY + ++ Y R C+ L+ ++GKI EA +
Sbjct: 346 SVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVL 405
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
R+M RGV+ A++Y L C G+ ++A+ +++ + +T+ LI
Sbjct: 406 RDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATI-VTYNSLIKGLCK 464
Query: 445 GGHIDDCISIFQHMKD--HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN-----S 497
G + + +F + HC P++ T N+++ YS K EL+E + +
Sbjct: 465 MGKLKEAEEMFFLITSTGHC-PDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTIN 523
Query: 498 SGYTFLSG---DGAPLK-------------PDEYTYSSMLEA-SATAHQWEYFEYVYKGM 540
+ + +SG +G LK PD Y++M+ T H + F + K M
Sbjct: 524 TFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFS-LQKEM 582
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 594
G + D + L++ + GK + D + G IP ++ +LIQ
Sbjct: 583 VDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYS-LLIQG 635
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 105/276 (38%), Gaps = 67/276 (24%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
+F M+++G+ T L+KGL G ++A + + D+ Y L
Sbjct: 437 LRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDV---ITYNSL 493
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
++ AG + L ++ M + L P I +H + G KE +KL E +
Sbjct: 494 ISGYSNAGNSQKCLELYETM-KKLGLKPTINTFHPLIS-----GCSKEGIKLKETL---- 543
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
M + N L PD VVYNA+++ + + F + K++ G++P TY
Sbjct: 544 ---FNEMLQMN----LSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTY-- 594
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA----------- 403
L+ +EGK++E V +M+ +G++ A Y L
Sbjct: 595 ----------NSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNG 644
Query: 404 ----------------CCLCN--------NGRWQDA 415
C+CN +GR Q+A
Sbjct: 645 AYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEA 680
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/430 (19%), Positives = 173/430 (40%), Gaps = 47/430 (10%)
Query: 202 DKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY 261
D S+R L + + ++ + KLL+ + K H+A+ + +E L
Sbjct: 95 DASSFRNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLS 154
Query: 262 PDIAAYHSVAVTLGQV-------GLLKELVKLIERMRQKPSKRIKNMHRKN--------- 305
PD H + Q+ +L +++KL ++ + N K
Sbjct: 155 PDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVEL 214
Query: 306 WDPVL----EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
+D ++ +PD+ Y ++N + +F+++ ++G +P TY ++S
Sbjct: 215 FDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDS--- 271
Query: 362 CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
++ ++NEA+ M+ +G+ Y L LCN RW++A ++ +
Sbjct: 272 ---------LCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNE 322
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 480
+ SL + P +TF+ LI G++ + + + M + EPN+ T ++++ YS
Sbjct: 323 MMSL-NIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQA 381
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
+A++LF+ KPD ++Y+ ++ A + + ++ M
Sbjct: 382 EVVEARKLFDVMITKGC-------------KPDVFSYNILINGYCKAKRIGEAKQLFNEM 428
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 600
G D + L+ + G+ F ++L G +P ++ +L Q
Sbjct: 429 IHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYL 488
Query: 601 EKAVALINAM 610
KA L AM
Sbjct: 489 AKAFRLFRAM 498
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 33/183 (18%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ KA R EA ++FN M+ L PDI +Y+++ L Q+G L+E L +
Sbjct: 403 FSYNILINGYCKAKRIGEAKQLFNEMIHQ-GLTPDIVSYNTLIDGLCQLGRLREAHDLFK 461
Query: 289 RM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M +Q + + R L+P++V+YN +++A S
Sbjct: 462 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSR 521
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
K +F +L GL+P+ Y ++ +EG ++EA+ A RNME
Sbjct: 522 NLKEARKLFSELFVQGLQPNVQIY------------TTIINGLCKEGLLDEALEAFRNME 569
Query: 389 QRG 391
+ G
Sbjct: 570 EDG 572
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 135/317 (42%), Gaps = 38/317 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL + WR+A ++L+ + L ++ + ++ L+ I K G EA + M
Sbjct: 303 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVT---FSLLINIFCKEGNVFEARGVLKTMT 359
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK-----------------PSKRI 298
E + P++ Y S+ + E KL + M K +KRI
Sbjct: 360 E-MGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRI 418
Query: 299 ---KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
K + + L PD+V YN +++ + + +FK + +G P TY
Sbjct: 419 GEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTY--- 475
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+L+ F ++G + +A R M+ + +Y L +C + ++A
Sbjct: 476 ---------SILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEA 526
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLK 474
+ ++ ++ +P +T +I G +D+ + F++M+ D C PN + N +++
Sbjct: 527 RKLFSEL-FVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIR 585
Query: 475 VYSRNDMFSKAKELFEE 491
+ ++ S+A +L E
Sbjct: 586 GFLQHKDESRAVQLIGE 602
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 144/372 (38%), Gaps = 56/372 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL--I 287
V+ ++ + ++GR +A ++ + M D + PD+ +++++ + G L V L +
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDTM-HDRGIDPDLVSFNTLINARSKSGCLAAGVALDLL 281
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+RQ L PD++ YN +++AC S + VF+ + S +P
Sbjct: 282 FEVRQSG---------------LRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRP 326
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
TY + + RC GK EA R + ++G + A Y L
Sbjct: 327 DLWTYNAMVSVHGRC------------GKAEEAERLFRELVEKGFMPDAITYNSLLYAFA 374
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
G E++ K EIT+ +I G +D + ++ M+ C P+
Sbjct: 375 KEGNVDKVEHTCEQLVKAGFKKN-EITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDA 433
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETT-----------------------RANSSGYTFL 503
T M+ + + ++A ++ E+ T RA++ TF
Sbjct: 434 VTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAEN-TFD 492
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
+ +KPD Y ML+ A + E +Y+ M + D + LLV ++
Sbjct: 493 CMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKED 552
Query: 564 KCHLLEHAFDSL 575
KC +E +
Sbjct: 553 KCEEIEEVIQDM 564
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 78/423 (18%), Positives = 174/423 (41%), Gaps = 48/423 (11%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S+ +Y +++ K G P A R+ + L+ ++ + G++ L ++ L
Sbjct: 709 SKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEIL 768
Query: 287 IERMRQKPS--KRIKN--MH-----------RKNWDPVLE----PDLVVYNAVLNACVPS 327
++ +RQ +RI N +H R +D +++ P + N ++ A +
Sbjct: 769 VKGLRQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVD 828
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ ++ V ++L+ K S +T + +L+ AF + G + E + M
Sbjct: 829 GRLDELYVVVEELQDMNFKISKST------------VLLLLDAFAKAGDVFEVMKIYNGM 876
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+ G + +Y + LC++ R++D L++ +++ L I L+ G+
Sbjct: 877 KAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAI-LNALLNMYTAAGN 935
Query: 448 IDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
D +++ ++ EP+ T N ++ +Y R+ F G+T L+
Sbjct: 936 FDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRS---------FRP-----EEGFTLLNEM 981
Query: 507 GA-PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
G L P +Y S+L ASA A E + +++ M QL+++ + ++ AG
Sbjct: 982 GKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNH 1041
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 625
E+ + E G P ++ +A ++N + + ++ ++ +
Sbjct: 1042 SKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTV 1101
Query: 626 FES 628
F++
Sbjct: 1102 FDA 1104
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 24/186 (12%)
Query: 465 NIGTVNAMLKVYSRNDMFSKAKEL---------------FEETTRANSSGYTFLSGDG-- 507
+ NAM+ VY+R+ F A++L F A S +G
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALD 279
Query: 508 -------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
+ L+PD TY++++ A + + E V++ M S C+ D + ++
Sbjct: 280 LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHG 339
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 620
R GK E F L+E G +P + + +L + N +K + A F E
Sbjct: 340 RCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEI 399
Query: 621 QWTELF 626
+ +
Sbjct: 400 TYNTMI 405
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 168/403 (41%), Gaps = 32/403 (7%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L G QA V + +K + YT L+ + GKAG+ + + + M+
Sbjct: 224 LLNALAKAGMVDQAYQVFE---DMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMV 280
Query: 256 -EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP-- 312
E C L ++ AY++V LG+ ++ E + ++ +M + + + + D VL
Sbjct: 281 SEGCVL--NLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLD-VLSTGG 337
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM----ESYRRCLLKVLV 368
L N +L+ C ++ K L KSG A + M E R ++
Sbjct: 338 QLHRLNEILDICSGCLNRPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSML 397
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
A K EA+ + M ++G+ +Y + L G+ + + ++R +
Sbjct: 398 EALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSAL---GKLKQVSFMSSLYDTMRAN 454
Query: 429 KPLEITFTGLIISSMDG--GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKA 485
+ FT I+ S G G +D +F+ M+D C+P++ T N+M+ +N +A
Sbjct: 455 GVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEA 514
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
LF++ GY PD +TYS ++E +++ + ++ M GC
Sbjct: 515 HMLFKDM---QEKGY----------DPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGC 561
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ + LL R GK +++L + G P + ++
Sbjct: 562 IPNIVTYNILLDCLERRGKTTEAHKFYETLKQQGLTPDSITYS 604
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 153/391 (39%), Gaps = 65/391 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
F Y LL L KAG +A ++F M ++ C+ PD Y + G+ G + V L+
Sbjct: 219 FAYNMLLNALAKAGMVDQAYQVFEDMKQNYCD--PDAYTYTILIRMSGKAGKTTKFVSLL 276
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
E M + VL +L+ YN V+ A + ++ ++ +S +P
Sbjct: 277 EEMVSEGC-------------VL--NLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRP 321
Query: 348 SAATYGLAME--------------------SYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ TY + ++ R + L++A + G +EA + M
Sbjct: 322 NQFTYSIMLDVLSTGGQLHRLNEILDICSGCLNRPVYSYLIKALCKSGHASEAHSVFCRM 381
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP-----LEITFTGLIISS 442
G + + LCN + +A+ L H P ++ +I S+
Sbjct: 382 WNSHEKGDRYAFVSMLEALCNAEKTTEAI-------DLLHMMPEKGITTDVGMYNMIFSA 434
Query: 443 MDG-GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
+ + S++ M+ + P++ T N M+ + R + KA ELFEE
Sbjct: 435 LGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLVDKASELFEEME------- 487
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
DG+ KPD TY+SM+ + ++K M G D ++ L+
Sbjct: 488 -----DGS-CKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFG 541
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
++ K + FD ++ G IP+ + + +L
Sbjct: 542 KSNKVDMACSLFDEMVAQGCIPNIVTYNILL 572
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 67/350 (19%), Positives = 133/350 (38%), Gaps = 56/350 (16%)
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
M RK + + D+ YN +LNA + + VF+ ++++ P A TY
Sbjct: 209 MRRKGY----KLDIFAYNMLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYTY-------- 256
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
+L+R + GK + V+ + M G V Y + L N +A+ ++
Sbjct: 257 ----TILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGKNKMVDEAIFMLS 312
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP--NIGTVNAMLKVYSR 478
K+ +P + T++ ++ GG + + D C N + ++K +
Sbjct: 313 KMIE-SDCRPNQFTYSIMLDVLSTGGQLHR----LNEILDICSGCLNRPVYSYLIKALCK 367
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
+ S+A +F ++ G D Y + SMLEA A + +
Sbjct: 368 SGHASEAHSVFCRMWNSHEKG-------------DRYAFVSMLEALCNAEKTTEAIDLLH 414
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
M G D + + + + + +D++ G +P ++ I+ S
Sbjct: 415 MMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVP------DVFTYNIMIS 468
Query: 599 NYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNC 648
++ + V L++ + +ELFE ED + + N++ NC
Sbjct: 469 SFGR-VGLVD------------KASELFEEMEDGSCKPDVVT-YNSMINC 504
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 79/408 (19%), Positives = 153/408 (37%), Gaps = 78/408 (19%)
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA--VLNACVPSHQWKGVFWVFK 338
+ L+ + R+ + P + ++ L L A V+ A P F+ F
Sbjct: 48 RHLICAVARILRSPVSHTPLLDLDDYLRSLRLTLTTAEASEVMKALAPDTSLALSFFRFA 107
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
G + A +Y ++LV F EA+ + ME+ GV G S
Sbjct: 108 ATSLPGFRHDAFSYN-----------RILVLLFSNRADPAEAMRLIAEMERDGVPGNIST 156
Query: 399 Y-------YELACCLCNNGRWQ----------------------DAMLVVEKIKSLRHSK 429
E+ CL +W V EK++ R
Sbjct: 157 VNLLVGMGVEVGRCLDLASKWGLRLNGYTYKCLVQAHLRSREVWKGFEVYEKMR--RKGY 214
Query: 430 PLEITFTGLIISSM-DGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
L+I ++++++ G +D +F+ MK ++C+P+ T ++++ + +K
Sbjct: 215 KLDIFAYNMLLNALAKAGMVDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVS 274
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
L EE + +G L + Y++++EA + ++ M S C+
Sbjct: 275 LLEE-----------MVSEGCVL--NLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRP 321
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 607
+Q ++ +L S G+ H L D + +G + P++ LI+A+ +S +
Sbjct: 322 NQFTYSIMLDVLSTGGQLHRLNEILD--ICSGCLNRPVY--SYLIKALCKSGHASE---- 373
Query: 608 NAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEI 655
A++ F R W ++ ++ R +L ALCN + I
Sbjct: 374 ---AHSVFC---RMW-----NSHEKGDRYAFVSMLEALCNAEKTTEAI 410
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 177/433 (40%), Gaps = 91/433 (21%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF---- 251
L+ GLG +G A S+ + + D + + VYT L+ K GR + +I+
Sbjct: 488 LIDGLGRRGRVDDAYSLYE---KMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMV 544
Query: 252 ------NLML----EDC--------------------NLYPDIAAYHSVAVTLGQVGLLK 281
+LML DC L PD+ +Y + L + G +
Sbjct: 545 HRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSR 604
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
E KL M+++ L D++ YN V++ S + + + ++++
Sbjct: 605 ETYKLFYEMKEQG---------------LHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMK 649
Query: 342 KSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
GL+P+ TYG ++ L K+ +++EA + GV +Y
Sbjct: 650 TKGLQPTVVTYGSVVDG----LAKI--------DRLDEAYMLFEEAKSIGVDLNVVIYSS 697
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD- 460
L GR +A L++E++ + P T+ L+ + + ID+ FQ+MK+
Sbjct: 698 LIDGFGKVGRIDEAYLILEELMQ-KGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNL 756
Query: 461 HCEPNIGT----VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF----LSGDGAPLK- 511
C PN T +N + + N F +E+ ++ + N+ YT L+ G ++
Sbjct: 757 KCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEA 816
Query: 512 -------------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
PD Y++M+E ++A++ V++ L GC+++ +K +L++
Sbjct: 817 RGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVN-SKTCVVLLD 875
Query: 559 ASRAGKCHLLEHA 571
A C LE A
Sbjct: 876 ALHKADC--LEQA 886
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 128/317 (40%), Gaps = 55/317 (17%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L A RP L +F+ M ++ ++ + ++ + G + + L++ M
Sbjct: 206 YTTLIGALSAANRPDPMLTLFHQM-QEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEM 264
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ DLV+YN ++ + + F +++ GL P
Sbjct: 265 KSNS---------------FTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDV 309
Query: 351 TY----GLAMESYRR-----------------CLL--KVLVRAFWEEGKINEAVAAVRNM 387
TY G+ ++ R C+ ++ + GK +EA + +
Sbjct: 310 TYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQ 369
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+++G + + Y + CL G+ ++A+ + ++++ + + P T+ LI G
Sbjct: 370 KRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR--QDAAPNLTTYNILIDMLCKAGE 427
Query: 448 IDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
++ + + MK+ PNI TVN M+ D KA++L E + FL D
Sbjct: 428 LEAALKVQDTMKEAGLFPNIMTVNIMI------DRLCKAQKLDEACS-------IFLGLD 474
Query: 507 GAPLKPDEYTYSSMLEA 523
PD T+ S+++
Sbjct: 475 HKVCSPDSRTFCSLIDG 491
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 115/559 (20%), Positives = 210/559 (37%), Gaps = 96/559 (17%)
Query: 106 DNLKRENLREL----KEMFEKDLNWVLDD-------DVQLGSDYFAKNVEWHPEKRWRSE 154
D + E LRE+ KE+ K LN ++ +V L K+ + P + +
Sbjct: 187 DRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNA 246
Query: 155 AEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
+ + D+L ++ R M++ GL E + + L G WR+A+S+++
Sbjct: 247 LVQVFLRADKLDTAQLVH------REMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE 300
Query: 215 WVYGLKDKRD-LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV--- 270
K D + + +Y K+++ L +A EA+ N M + P++ Y +
Sbjct: 301 -------KEDFVPNTILYNKMISGLCEASFFEEAMDFLNRM-RSTSCIPNVQTYRILLCG 352
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKN-----------------MHRKNWDPVLEPD 313
+ Q+G K ++ ++ PS I N + +K +P
Sbjct: 353 CLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPG 412
Query: 314 LVVYNAVLNACVPSHQWKG--VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
VVYN ++ + + G F + ++ L + + S+ RCL
Sbjct: 413 YVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGF----- 467
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
GK +A + M G V S Y E+ LCN R ++A + +++K P
Sbjct: 468 ---GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKG-TGVVPD 523
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
T+T LI G I + M +D CEP + T ++ Y + S A ELFE
Sbjct: 524 VYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 583
Query: 491 E-----------TTRANSSGYT---------------------------FLSGDGAPLKP 512
T A GY F + KP
Sbjct: 584 LMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKP 643
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
+ TY ++++ AH+ + + + M + GC+ + + L+ +A K + F
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703
Query: 573 DSLLEAGEIPHPLFFTEML 591
++E G P+ ++ ++
Sbjct: 704 HKMVEHGYNPNVYTYSSLI 722
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/476 (18%), Positives = 171/476 (35%), Gaps = 102/476 (21%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M +G + + ++ + L G + +A V+ + G D + Y++++ L
Sbjct: 445 MLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTST---YSEVIGFLCN 501
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
A R A +F M + + PD+ Y + + G++K+ ++ M +
Sbjct: 502 ASRVENAFFLFKEM-KGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGC----- 555
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
EP +V Y +++A + + + +F+ + G P+ TY
Sbjct: 556 ----------EPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITY-------- 597
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
L+ + + G I +A M + +Y+
Sbjct: 598 ----TALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYF-------------------- 633
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 479
KIK+ KP +T+ L+ + D + + M D CEPN +A++ + +
Sbjct: 634 KIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKA 693
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS-------------------- 519
+A+E+F + GY P+ YTYSS
Sbjct: 694 AKLDEAQEVFHKMVE---HGYN----------PNVYTYSSLIDRLFKDKRLDLVLKVLSK 740
Query: 520 MLEASATAHQWEYFEYV------------YKGMAL---SGCQLDQTKHAWLLVEASRAGK 564
MLE S + Y E + YK M + GC+ + + ++ +AGK
Sbjct: 741 MLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGK 800
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM--AYAPFHIT 618
F + G P+ + +T ++ + ++A AL+ M Y P H++
Sbjct: 801 VDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVS 856
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/325 (18%), Positives = 116/325 (35%), Gaps = 38/325 (11%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N ++ C + W +L+ G KP+ TY LV+ F K+
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTY------------NALVQVFLRADKL 257
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+ A R M + G+ A LC G+W++A+ ++EK P I +
Sbjct: 258 DTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK----EDFVPNTILYNK 313
Query: 438 LIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
+I + ++ + M+ C PN+ T +L + K +
Sbjct: 314 MISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRIL------- 366
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ + +G P ++S++ A + + Y + K M C+ + L+
Sbjct: 367 ----SMMIAEGC--YPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILI 420
Query: 557 VEASRAGKC------HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
G+ L E A++ +L AG + + + +EKA +I+ M
Sbjct: 421 GSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEM 480
Query: 611 AYAPFHITERQWTEL--FESNEDRI 633
F ++E+ F N R+
Sbjct: 481 MGNGFVPDTSTYSEVIGFLCNASRV 505
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 100/246 (40%), Gaps = 32/246 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT+++ L K + EA ++ LM+E+ P++ Y ++ G+ G + + ++L
Sbjct: 752 IYTEMIDGLSKVAKTDEAYKLM-LMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFRE 810
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K P+ V Y ++N C + + + ++++++
Sbjct: 811 MGSKGCA---------------PNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHV 855
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
++Y +E Y+R +L EE +E+ G +Y L
Sbjct: 856 SSYCKVIEGYKREF--ILSLGLLEE------------VEKNGSAPIILLYKVLIDNFVKA 901
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEIT-FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
GR + A+ + +++ S S + +T LI S I +F M +D P++G
Sbjct: 902 GRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLG 961
Query: 468 TVNAML 473
T +L
Sbjct: 962 TFVHLL 967
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 179/461 (38%), Gaps = 62/461 (13%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
V++ L + + F M GL FT G L+ GL ++A ++LD +
Sbjct: 283 VMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGA---LMNGLCKGSRLKEAKALLDEM 339
Query: 217 Y--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
GLK + VY L+ K G+ EA I M+ + P+ Y ++ L
Sbjct: 340 SCSGLK-----PNIVVYGTLVDGFMKEGKTAEAFDILKEMIS-AGVQPNKIMYDNLIRGL 393
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
++G L KL++ M + L PD YN ++ H G F
Sbjct: 394 CKIGQLGRASKLLKEMIKVG---------------LRPDTFTYNPLMQGHFQQHDKDGAF 438
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
+ ++R SG+ P+ +YG +++ + G+ EA + M G+
Sbjct: 439 ELLNEMRNSGILPNVYSYG------------IMINGLCQNGESKEAGNLLEEMISEGLKP 486
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
A +Y L G A +EK+ + P + LI G +++
Sbjct: 487 NAFMYAPLIIGHSKEGNISLACEALEKMTK-ANVHPDLFCYNSLIKGLSTVGRMEEAEEY 545
Query: 455 F-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 513
+ Q K P+ T + ++ Y + KA +L + + LKP+
Sbjct: 546 YAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG-------------LKPN 592
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
TY+ +LE ++ +E + + M SG + D + ++ SR+ +E AF
Sbjct: 593 ADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSEN---MEVAFM 649
Query: 574 SLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
L E G +P ++ ++ ++ EKAV L++ MA
Sbjct: 650 VLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMA 690
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/306 (17%), Positives = 113/306 (36%), Gaps = 27/306 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+ Y+ + A + + VF+++R+ + TY V++
Sbjct: 241 PDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTY------------NVMISGL 288
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
G + EA M G+ A Y L LC R ++A +++++ S KP
Sbjct: 289 CRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEM-SCSGLKPN 347
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ + L+ M G + I + M +PN + +++ + +A +L +
Sbjct: 348 IVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLK 407
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E + L+PD +TY+ +++ H + + M SG +
Sbjct: 408 EMIKVG-------------LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVY 454
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ ++ + G+ + + ++ G P+ + ++I + N A + M
Sbjct: 455 SYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKM 514
Query: 611 AYAPFH 616
A H
Sbjct: 515 TKANVH 520
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 116/315 (36%), Gaps = 46/315 (14%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
+ +R M SGL LL+G + + S+L + G DK D +Y ++
Sbjct: 579 QLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPD---NHIYGIVI 635
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ-------VGLLKELVK--- 285
L ++ A + +E L PD+ Y S+ L + VGLL E+ K
Sbjct: 636 RNLSRSENMEVAFMVLT-EVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGL 694
Query: 286 ---------LIERM-RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
LI+ R R +N+ L P+ V Y A+++ + F
Sbjct: 695 EPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFD 754
Query: 336 VFKQLRKSGLKPSAATYG-----------------LAMESYRR-----CLLKVLVRAFWE 373
++K++ G+ P A Y L E + R L LV F +
Sbjct: 755 LYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCK 814
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
GK+ E + M R +V A ++ G+ +A V +++ + S+
Sbjct: 815 RGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATD 874
Query: 434 TFTGLIISSMDGGHI 448
F+ L ++ G I
Sbjct: 875 RFSLLFTDMINKGLI 889
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
+GA + PD YTYS+ +EA A ++ + V++ M C +++ + ++ R+G
Sbjct: 235 EGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA- 293
Query: 566 HLLEHAF---DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+E AF + +++ G P + ++ S ++A AL++ M+
Sbjct: 294 --VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMS 340
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 137/330 (41%), Gaps = 48/330 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL + G W +L + G + + + ++ L+ + K G+ EA ++N M+
Sbjct: 285 IIGGLCNDGRWDDGAKMLREMIG---RNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMV 341
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD Y S+ + L E ++++ M K EP++V
Sbjct: 342 AR-GIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGC---------------EPNIV 385
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y+ ++N+ + + +F ++ GL TY LV+ F + G
Sbjct: 386 TYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTY------------NTLVQGFCQSG 433
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
K+N A + M RGV + Y L LC+NG Q A+ + EK++ R L I
Sbjct: 434 KLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRM--ILGIGI 491
Query: 436 TGLIISSM-DGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+II M + +DD S+F + +P++ T N M+ + S+A LF +
Sbjct: 492 YNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRK-- 549
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+ DG P + TY+ ++ A
Sbjct: 550 ---------MKEDGCA--PSDCTYNILIRA 568
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/370 (18%), Positives = 153/370 (41%), Gaps = 43/370 (11%)
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
GR EA+ + + M+E P++ +++ L G + E + LI+RM +
Sbjct: 153 GRVSEAVALVDRMVE-MKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGC------ 205
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
E + + Y VLN S +F+++ + +K S Y + ++S
Sbjct: 206 ---------EANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDS--- 253
Query: 362 CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
++G +++A++ ME +G+ Y + LCN+GRW D ++ +
Sbjct: 254 ---------LCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLRE 304
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 480
+ R+ P +TF+ LI + G + + ++ M P+ T ++++ + + +
Sbjct: 305 MIG-RNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKEN 363
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
+A ++ + + G +P+ TYS ++ + A + + ++ +
Sbjct: 364 RLGEANQMLD-----------LMVSKGC--EPNIVTYSILINSYCKAKRVDNGMRLFCEI 410
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 600
+ G D + L+ ++GK ++ + F ++ G P + + +L
Sbjct: 411 SSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 470
Query: 601 EKAVALINAM 610
+KA+ + M
Sbjct: 471 QKALEIFEKM 480
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 68/378 (17%), Positives = 127/378 (33%), Gaps = 107/378 (28%)
Query: 302 HRKNWDPVL-----------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
RK +D VL E ++ N ++N + F V + K G +P+
Sbjct: 81 RRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTI 140
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
T+ L+ F EG+++EAVA V M + L LC G
Sbjct: 141 TF------------STLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKG 188
Query: 411 RWQDAMLVVEKIKSL----------------------------------RHSKPLEITFT 436
R +A+++++++ R K + ++
Sbjct: 189 RVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYS 248
Query: 437 GLIISSMDGGHIDDCISIFQHMK----------------DHCE----------------- 463
+I S G++DD +S+F M+ C
Sbjct: 249 IVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGR 308
Query: 464 ---PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 520
PN+ T +A++ V+ + +AKEL+ E + PD TYSS+
Sbjct: 309 NIIPNVVTFSALIDVFVKEGKLLEAKELYNEMV-------------ARGIAPDTITYSSL 355
Query: 521 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 580
++ ++ + M GC+ + ++ L+ +A + F + G
Sbjct: 356 IDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGL 415
Query: 581 IPHPLFFTEMLIQAIVQS 598
+ + + L+Q QS
Sbjct: 416 VADTVTYNT-LVQGFCQS 432
>gi|30689969|ref|NP_197945.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|357528836|sp|Q8GZ63.2|PP397_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g25630
gi|332006092|gb|AED93475.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 574
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 172/424 (40%), Gaps = 75/424 (17%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG---QVGL 279
R ++SR TKL+ +L + GRPHEA +F + E + P + +Y ++ + Q G
Sbjct: 43 RTVRSR---TKLMNVLIERGRPHEAQTVFKTLAETGH-RPSLISYTTLLAAMTVQKQYGS 98
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ +V +E+ K D + +NAV+NA S + +
Sbjct: 99 ISSIVSEVEQSGTKL------------------DSIFFNAVINAFSESGNMEDAVQALLK 140
Query: 340 LRKSGLKPSAAT-------YGLAMESYRRCLL-------------------KVLVRAFWE 373
+++ GL P+ +T YG+A + R L VLV+A+ +
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLE 432
+ K+ EA V+ ME+ GV Y +A C G A VVEK+ +KP
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI----GTVNAMLKVYSRNDMFSKAKE 487
T ++ G + D + + MK+ E N+ +N ++V R D +
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR-DGIDEVLT 319
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
L +E +K D TYS+++ A ++A E V+K M +G +
Sbjct: 320 LMKECN----------------VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 363
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 607
D ++ L RA + E ++L+ P+ + FT ++ + + A+ +
Sbjct: 364 DAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMDDAMRVF 422
Query: 608 NAMA 611
N M
Sbjct: 423 NKMC 426
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 150/381 (39%), Gaps = 48/381 (12%)
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
D L P+ ++N ++ V + VF +++ G++ + ++
Sbjct: 232 LDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSF------------N 279
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
++ G ++ A R M + GV Y L LC GR +DA V EK+
Sbjct: 280 TMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCG- 338
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
R KP + FT LI + G + + + + M++ P+ T NA++ R
Sbjct: 339 RGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKS 398
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A + E A L+PD TY+++++ + + + + M G
Sbjct: 399 ASGIVVEMRSAG-------------LRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEG 445
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV-QSNYEKA 603
LD+ + L+ S+AG+ E ++EAG P +T M+I A + + +
Sbjct: 446 VGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYT-MVIDAFCRKGDVKTG 504
Query: 604 VALINAM-------AYAPFHITERQWTELFE-SNEDRISRDKLEKLLNALCNCNAASSEI 655
+ L+ M +++ + +L + N D LLNA+ N + +I
Sbjct: 505 LRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNAD--------MLLNAMINIGVSPDDI 556
Query: 656 TVSNLSRALHALCRSEKERDL 676
T + L L C+ K D+
Sbjct: 557 TYNIL---LDGHCKHGKVTDI 574
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/349 (19%), Positives = 140/349 (40%), Gaps = 51/349 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L G A +V D + +R + S + +++ + +AG A + M
Sbjct: 246 LMRDLVRLGELASAQNVFDEMQSRGVRRTVVS---FNTMISGMCRAGDLDGAETLHRRMS 302
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM--------------------RQKPS 295
E + PD+ Y ++ L +VG +++ + E+M ++ +
Sbjct: 303 E-AGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDA 361
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ + +HR+ + + PD V YNA++N + K + ++R +GL+P TY
Sbjct: 362 ETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTY--- 418
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+ + +E +++ A+ +NM GV Y L L GR DA
Sbjct: 419 ---------TTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 469
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLK 474
V+ ++ +P T+T +I + G + + + + M++ +P + T N ++
Sbjct: 470 ERVLGEMME-AGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMN 528
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+ + A L S PD+ TY+ +L+
Sbjct: 529 GFCKLGQMKNADMLLNAMINIGVS-------------PDDITYNILLDG 564
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/385 (19%), Positives = 160/385 (41%), Gaps = 57/385 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G+ ++G + A+ + + + + D+ S Y L+ L +G + A+ +F M
Sbjct: 169 LINGVCNEGKIKVAVELYNEMVRSGHEPDVIS---YNTLINGLCNSGNTNMAVHVFKKM- 224
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E P++ Y+++ +L + L+ + + + M + + PD +
Sbjct: 225 EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRG---------------IPPDAI 269
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES-YRRCLLK--------- 365
YN++++ Q +FK++ ++G KP TY + ++S Y+ L+
Sbjct: 270 TYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEM 329
Query: 366 -------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
++ G++NEA+ + MEQ+G Y + LC +
Sbjct: 330 VDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLV 389
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 471
DAM + ++ R P +T++ ++ + G +D+ +F+ M + PN T +
Sbjct: 390 NDAMEFLSEMVD-RGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSI 448
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
++ + M S+A+ +FE T ++P+ YTY++++ +
Sbjct: 449 LVDGLCQEGMVSEARWVFETMTEKG-------------VEPNIYTYNALMNGYCLRCKMN 495
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLL 556
V++ M GC D + L+
Sbjct: 496 EARKVFEIMVGKGCAPDLHSYNILI 520
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/346 (19%), Positives = 133/346 (38%), Gaps = 53/346 (15%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ + ++ + G +K V+L M +++ H EPD++ YN ++
Sbjct: 161 PDVITFTTLINGVCNEGKIKVAVELYNEM-------VRSGH--------EPDVISYNTLI 205
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL----------------- 364
N S VFK++ ++G KP+ TY ++S + L
Sbjct: 206 NGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIP 265
Query: 365 ------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
+V G++NEA + MEQ G Y + L + DA
Sbjct: 266 PDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADF 325
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS 477
+ ++ + P +T+T ++ G +++ I +F+ M+ C+P++ N ++
Sbjct: 326 LSEMVD-QGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLC 384
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
++ + + A E E + G P P+ TYS++L Q + ++
Sbjct: 385 KDRLVNDAMEFLSE-----------MVDRGIP--PNAVTYSTILHGFCNLGQLDEATQLF 431
Query: 538 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
K M + + L+ + G F+++ E G P+
Sbjct: 432 KEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPN 477
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 133/345 (38%), Gaps = 33/345 (9%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
+K + + A ++D L + + +F+ M G+ +L G + G
Sbjct: 366 QKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLD 425
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A + + G + + + ++ L+ L + G EA +F M E + P+I Y
Sbjct: 426 EATQLFKEMVG---RNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEK-GVEPNIYTY 481
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+++ + E K+ E M K PDL YN ++N S
Sbjct: 482 NALMNGYCLRCKMNEARKVFEIMVGKGC---------------APDLHSYNILINGYCNS 526
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ + Q+ L P+ TY M + G++ +A + M
Sbjct: 527 RRMDKAKALLTQMSVKKLTPNTVTYNTIM------------KGLCYVGRLLDAQELFKKM 574
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
G++ T Y L LC +G +A+ + + +K + +P I +T LI GG
Sbjct: 575 CSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKE-KKLEPDIILYTILIEGMFIGGK 633
Query: 448 IDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
++ +F + D +P T N M+K + + +A ELF +
Sbjct: 634 LEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 159/391 (40%), Gaps = 59/391 (15%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+RF ++ L+A L KAGR EA+ +N MLE + P++ + + +L Q G + + + +
Sbjct: 2 NRFTFSVLIAGLCKAGRLGEAVECYNQMLER-HCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-GL 345
++ PS ++ N ++N +F ++ K+ L
Sbjct: 61 FRGIQCSPS------------------VITLNILINGFCELQLLDKALELFHEMEKNFAL 102
Query: 346 KPSAATYGLAMESYRR---------------CL------LKVLVRAFWEEGKINEAVAAV 384
P A TY ++ Y + C + + R F + +++EA +
Sbjct: 103 VPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLL 162
Query: 385 RNMEQRGVVGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 443
+M ++ V + + C GR ++A ++E + S+ P +T+T LI
Sbjct: 163 LDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSM-GCVPNAVTYTTLIDGFC 221
Query: 444 DGGHIDDCISIFQHMKD---HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
G++ + + +F+ + H EPN+ T NA++ + D A EL ++ +
Sbjct: 222 KSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARD---- 277
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
L+ D +TY+++++ + V++ M GC + L+
Sbjct: 278 ---------LRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHC 328
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+AG + S++ G P +T +L
Sbjct: 329 KAGSLQDAQQVIRSMVAKGIPPDVTTYTVLL 359
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 110/266 (41%), Gaps = 32/266 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G R+A +L+ + + + + YT L+ K+G EAL++F ++
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGC---VPNAVTYTTLIDGFCKSGNLSEALQLFKVLS 237
Query: 256 E-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
D + P++ ++++ L + L+ +L+++M+ + L D
Sbjct: 238 SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARD---------------LRADT 282
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
Y +++ + V VF+++ + G PS TY LV A +
Sbjct: 283 FTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTY------------TTLVHAHCKA 330
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
G + +A +R+M +G+ + Y L L NG+ + A EKI R P +
Sbjct: 331 GSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRER-CPPCAVV 389
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKD 460
++ L+ +D+ + + M D
Sbjct: 390 YSALVRGCCKAALVDEAVKYYVEMLD 415
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 178/477 (37%), Gaps = 102/477 (21%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
+A L+D +R+ + +R M ++G + L GL G + +A+ +L
Sbjct: 612 DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 671
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
D+ + + + Y+ ++ L KAGR EAL F M D + P + AY ++
Sbjct: 672 DY---MAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDG 728
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
L + G + E + +ERM + + RI PD+V ++ ++N + +
Sbjct: 729 LCKAGRIDEAYEFLERMIR--AGRI-------------PDVVTFSILINGLCDAGRIDTG 773
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
+F + + G K Y ++ A+ +G+ + A A + M+ G+
Sbjct: 774 LELFCGMAERGCKADIYAY------------NAMINAYCLKGEFSAAYALLEEMKTHGIA 821
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL----EITFTGLIISSM------ 443
+ + LC N R +A+ S HS P EI++ LI S +
Sbjct: 822 KNTVTHGIVIKALCGNDRIDEAV-------SYFHSIPEDCRDEISYNTLITSLVASRRSE 874
Query: 444 -----------DGGHIDDC------------------ISIFQHMKDHC-EPNIGTVNAML 473
DGG D C + Q M+ P++ T M+
Sbjct: 875 QALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMI 934
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ---- 529
S+ A + FEE R N LKPD YSS+++A A +
Sbjct: 935 SGLSKAKQLPLACDYFEEMLRKN-------------LKPDAIVYSSLIDAFCKADKVDDA 981
Query: 530 WEYFE--------YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 578
W+ +Y M S C+ T A ++ ++ C H + SL A
Sbjct: 982 WKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATA 1038
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 149/399 (37%), Gaps = 82/399 (20%)
Query: 144 EWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDK 203
EW W + + L+ ++ + N V +++SG++ +L+ + G
Sbjct: 447 EWRSSSSWPIHSPEVDFLMVQVCRPTLVTYN-TLVTGLSKSGMVRDALGLLEFMIESGLS 505
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFV---------------YTKLLAILGKAGRPHEAL 248
SVLD + K++R L + V Y+ L+ L K + EAL
Sbjct: 506 PDVITFNSVLDGL--CKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEAL 563
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP 308
++ M+E + Y +V L +VG +++ V ++ +MR D
Sbjct: 564 QLLAKMVE-LGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR---------------DA 607
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLV 368
PD V YN +++ + + + +++ ++G PS TY L
Sbjct: 608 GCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY------------TTLC 655
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI------ 422
G+ +EAV + M RG A Y + LC GR +A+ EK+
Sbjct: 656 HGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVV 715
Query: 423 ----------------------------KSLRHSK-PLEITFTGLIISSMDGGHIDDCIS 453
+ +R + P +TF+ LI D G ID +
Sbjct: 716 APHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLE 775
Query: 454 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+F M + C+ +I NAM+ Y FS A L EE
Sbjct: 776 LFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEE 814
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/444 (19%), Positives = 176/444 (39%), Gaps = 77/444 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN--- 252
L++GL + G QA V + + ++ +RF Y LL L KAG + F
Sbjct: 387 LIQGLCNAGRVNQAWEVYERMVAVEGIS--PNRFTYAFLLEGLCKAGDSRRLEQCFEQML 444
Query: 253 -------------------LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LM++ C P + Y+++ L + G++++ + L+E M +
Sbjct: 445 EREWRSSSSWPIHSPEVDFLMVQVCR--PTLVTYNTLVTGLSKSGMVRDALGLLEFMIES 502
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
L PD++ +N+VL+ + VFK+ + G +P+ TY
Sbjct: 503 G---------------LSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTY- 546
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
L+ + K++EA+ + M + G Y + L GR +
Sbjct: 547 -----------STLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 595
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAM 472
DA++V+ +++ P +T+ LI + + + + + M + P++ T +
Sbjct: 596 DAVVVLRQMRD-AGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL 654
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE----ASATAH 528
R+ F +A E+ + +++ G P+ TYSS+++ A
Sbjct: 655 CHGLCRSGRFDEAVEILD-----------YMAARGC--APNAITYSSIVDGLCKAGRVTE 701
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
YFE + + ++ ++ L+ +AG+ + ++ AG IP + F+
Sbjct: 702 ALGYFEKMARDEVVAP---HVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFS 758
Query: 589 EMLIQAIVQSN-YEKAVALINAMA 611
+LI + + + + L MA
Sbjct: 759 -ILINGLCDAGRIDTGLELFCGMA 781
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/384 (20%), Positives = 147/384 (38%), Gaps = 55/384 (14%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L KAGR +A F ++ P + Y +V L + + + KL+E M
Sbjct: 4 YNVLINGLCKAGRVCDAFTAFRKAIQF-GFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ P+ V YN ++NA + + K F + +++ +G P
Sbjct: 63 AGRGCA---------------PNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELI 107
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
T+GL +++ +EG+I A V M RG V ++ L LC G
Sbjct: 108 TFGL------------IIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELG 155
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTV 469
R +A +++ + + P +T+ ++ G ++ + Q + + P + T
Sbjct: 156 RVDEAWFFFQQVLLIGFT-PDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTF 214
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
+ S+ + A E F+ + S P+ TY ++++ A +
Sbjct: 215 TIAVDGLSKAGNLTGAYEFFDSMPQTGVS-------------PNTVTYDALIDGLCKAGK 261
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA-GKC--HLLEHAFDSLLEAGEIPHPLF 586
+ +AL G D+ A + +S G C H LE A L +P+ +
Sbjct: 262 LD--------IAL-GLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVC 312
Query: 587 FTEMLIQAIVQSNYEKAVALINAM 610
F ++ ++A L + M
Sbjct: 313 FNSLMNGLCQARRVDEAFELFDVM 336
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 100/491 (20%), Positives = 189/491 (38%), Gaps = 90/491 (18%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L KAG+ AL +L D N + A+ S+ L Q L+E ++L++ M
Sbjct: 249 YDALIDGLCKAGKLDIALG----LLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM 304
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
P + P++V +N+++N + + F +F +++SG
Sbjct: 305 -----------------PCV-PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVI 346
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ-RGVVGTASVYYELACCLCNN 409
TY +L++ + +I EA V M + G + L LCN
Sbjct: 347 TY------------NILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNA 394
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGL---IISSMDGGHIDDCISIFQHMKDH----- 461
GR A V E++ ++ P T+ L + + D ++ C F+ M +
Sbjct: 395 GRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQC---FEQMLEREWRSS 451
Query: 462 -----------------CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG--YTF 502
C P + T N ++ S++ M A L E + S TF
Sbjct: 452 SSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITF 511
Query: 503 LSG-DGA-------------------PLKPDEYTYSSMLEA-SATAHQWEYFEYVYKGMA 541
S DG +P+ TYS++++ S A E + + K +
Sbjct: 512 NSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE 571
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 601
L GC+ + ++ ++ + G+ + +AG +P + + ++ +
Sbjct: 572 L-GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLR 630
Query: 602 KAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLS 661
+AV L+ M A FH + +T L D+ ++L+ + A + IT S++
Sbjct: 631 EAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSI- 689
Query: 662 RALHALCRSEK 672
+ LC++ +
Sbjct: 690 --VDGLCKAGR 698
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 114/302 (37%), Gaps = 45/302 (14%)
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
+V YN ++N + + F F++ + G +P+ TY ++ R
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCR------------ 48
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
+ ++++ + M RG A Y L L GR ++A ++E++ + + P E+
Sbjct: 49 DNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAA--NGCPPEL 106
Query: 434 TFTGLIISSM-DGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
GLII + G I+ + M D P++ +L +A F++
Sbjct: 107 ITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQ 166
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
G+T PD TY++M++ A + E GM L
Sbjct: 167 VLLI---GFT----------PDAVTYNTMVDGLYKAGRLE-----AAGMVLQ-------- 200
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
LL E+ + A D L +AG + F + + Q V N ALI+ +
Sbjct: 201 ---LLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLC 257
Query: 612 YA 613
A
Sbjct: 258 KA 259
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 98/236 (41%), Gaps = 32/236 (13%)
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
D + Y L+ L + R +AL + M+ D PD Y +V L + G +
Sbjct: 853 DCRDEISYNTLITSLVASRRSEQALELLRAMVADGG-SPDACNYMTVMDGLFKAGSPEVA 911
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
KL++ MR + PDL Y +++ + Q F+++ +
Sbjct: 912 AKLLQEMRSRGHS---------------PDLRTYTIMISGLSKAKQLPLACDYFEEMLRK 956
Query: 344 GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
LKP A Y L+ AF + K+++A +R+ G+ T ++Y +
Sbjct: 957 NLKPDAIVY------------SSLIDAFCKADKVDDAWKLLRS---SGIEPTITMYSTMV 1001
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
LC N A+ V+ ++KS ++ +P +T L + + G +D+ + + ++
Sbjct: 1002 DSLCKNRGTDKALEVIREMKS-KNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 140/350 (40%), Gaps = 58/350 (16%)
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERM---RQKPS------------KRIK---- 299
+L PD+ Y ++ L +V + +++++ M R PS KR K
Sbjct: 292 DLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEA 351
Query: 300 -NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
N+ ++ D + P+L VYNA++++ ++ +F ++ K GL+P+ TY + ++
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 359 Y-RRCLLKV----------------------LVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+ RR L L+ + G I+ A + M + + T
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
Y L C+ G+ A+ + ++ + P TFT L+ G I D + +F
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTG-KGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 456 QHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 514
M + + +PN T N M++ Y SKA E +E T + PD
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG-------------IVPDT 577
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
Y+Y ++ Q + G+ C+L++ + LL R GK
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/473 (20%), Positives = 188/473 (39%), Gaps = 75/473 (15%)
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL 248
+E + L++GL +G +A++++ V +L FVY L+ L K + HEA
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL---FVYNALIDSLCKGRKFHEAE 387
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVG-------LLKELVKLIERMRQKPSKRIKNM 301
+F+ M L P+ Y + + G L E+V ++ P + N
Sbjct: 388 LLFDRM-GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 302 HRKNWD-------------PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
H K D LEP +V Y +++ + ++ ++ G+ PS
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506
Query: 349 AATY----------GLAMESYR-------------RCLLKVLVRAFWEEGKINEAVAAVR 385
T+ GL ++ + R V++ + EEG +++A ++
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M ++G+V Y L LC G+ +A + V+ + + + EI +TGL+
Sbjct: 567 EMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK-GNCELNEICYTGLLHGFCRE 625
Query: 446 GHIDDCISIFQHMKDH-------CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
G +++ +S+ Q M C + ++ LK R F KE+ +
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVL--IDGSLKHKDRKLFFGLLKEMHDRG------ 677
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
LKPD+ Y+SM++A + ++ ++ M GC ++ + ++
Sbjct: 678 -----------LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML-IQAIVQSNYEKAVALINAM 610
+AG + E + +P+ + + L I + + +KAV L NA+
Sbjct: 727 LCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI 779
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 94/478 (19%), Positives = 180/478 (37%), Gaps = 61/478 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D R F+ M +GL + L+ G G A ++ +
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG---FMAEM 463
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+K+ + YT L+ G+ ++ALR+++ M + P I + ++ L + GL
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK-GIAPSIYTFTTLLSGLFRAGL 522
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+++ VKL M + W+ ++P+ V YN ++ F K+
Sbjct: 523 IRDAVKLFNEMAE-------------WN--VKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 340 LRKSGLKPSAATY-----GLAMESYR-------------RCLLK-----VLVRAFWEEGK 376
+ + G+ P +Y GL + C L L+ F EGK
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL--RHSKPLEIT 434
+ EA++ + M QRGV Y L + + + +D L +K + R KP ++
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVL---IDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 435 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+T +I + G + I+ M + C PN T A++ + ++A+ L +
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
+S P++ TY L+ L G + +
Sbjct: 745 PVSSV-------------PNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYN 791
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
L+ R G+ ++ G P + +T M+ + +++ +KA+ L N+M
Sbjct: 792 MLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/390 (19%), Positives = 151/390 (38%), Gaps = 48/390 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++G ++G +A +++ + +K + + Y L+ L G+ EA ++F L
Sbjct: 548 MIEGYCEEGDMSKA---FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGL 603
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
N + Y + + G L+E + + + M Q+ ++ DLV
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG---------------VDLDLV 648
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y +++ + K F + K++ GLKP Y ++ A + G
Sbjct: 649 CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY------------TSMIDAKSKTG 696
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
EA M G V Y + LC G +A ++ K++ + S P ++T+
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPV-SSVPNQVTY 755
Query: 436 TGLIISSMDGGHID--DCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
G + + G +D + + + N T N +++ + R +A EL
Sbjct: 756 -GCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELI---- 810
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
T + GDG + PD TY++M+ + + ++ M G + D+ +
Sbjct: 811 -------TRMIGDG--VSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
L+ AG+ + +L G IP+
Sbjct: 862 TLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 40.0 bits (92), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 45/239 (18%), Positives = 96/239 (40%), Gaps = 42/239 (17%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK---- 365
L P++ +A+L+ V + +F + G++P Y + S C LK
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSL--CELKDLSR 245
Query: 366 ---------------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
VL+ ++ K+ EAV +++ + + Y L
Sbjct: 246 AKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVY 305
Query: 405 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 463
LC ++ + +++++ LR S P E + L+ G I++ +++ + + D
Sbjct: 306 GLCKVQEFEIGLEMMDEMLCLRFS-PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVS 364
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
PN+ NA++ + F +A+ LF+ + L+P++ TYS +++
Sbjct: 365 PNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG-------------LRPNDVTYSILID 410
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 139/362 (38%), Gaps = 46/362 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L++ K+G EALR+ + M + P+ A Y +V +L G LK+ ++++ R
Sbjct: 152 YNVLISGYCKSGEIEEALRVLDRM----GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q PD+V +++A +F ++R G KP
Sbjct: 208 LQSKC---------------YPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVV 252
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY VL++ F + G+++EA+ ++ + G + + LC+ G
Sbjct: 253 TY------------NVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGG 300
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTV 469
RW DAM ++ + + P +TF LI G + +++ + M H PN +
Sbjct: 301 RWMDAMKLLATMLR-KGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSF 359
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
N +++ + +A E E PD TY+ +L A +
Sbjct: 360 NPLIQGFCNGKGIDRAIEYLEIMVSRGCY-------------PDIVTYNILLTALCKDGK 406
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
+ + ++ GC + ++ + GK L + + G P + T
Sbjct: 407 VDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTS 466
Query: 590 ML 591
++
Sbjct: 467 VV 468
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/422 (19%), Positives = 162/422 (38%), Gaps = 71/422 (16%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR-----FVYT 232
+R++++ G+ +L L D+G +QAM VL R L+S+ T
Sbjct: 169 LRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLG--------RQLQSKCYPDVVTCT 220
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
L+ K +A+++FN M + PD+ Y+ + + G L E ++ ++++
Sbjct: 221 VLIDATCKESGVGQAMKLFNEM-RNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKL-- 277
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
PS +PD++ +N +L + +W + + + G PS T+
Sbjct: 278 -PSYGC------------QPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTF 324
Query: 353 GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
+L+ ++G + +A+ + M + G + + L C NG+
Sbjct: 325 ------------NILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFC-NGKG 371
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 471
D + +I R P +T+ L+ + G +DD + I + C P++ + N
Sbjct: 372 IDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNT 431
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML---------- 521
++ + A EL EE LKPD T +S++
Sbjct: 432 VIDGLLKVGKAELAVELLEEMCYKG-------------LKPDLITCTSVVGGLSREGKVR 478
Query: 522 EASATAHQWEYF-----EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
EA H + F ++Y + C+ QT A + A C E + +L+
Sbjct: 479 EAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLI 538
Query: 577 EA 578
+
Sbjct: 539 KG 540
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 99/499 (19%), Positives = 188/499 (37%), Gaps = 112/499 (22%)
Query: 130 DDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSG---L 186
DDVQ + VE + R + + + L+ E M K + + + G
Sbjct: 12 DDVQ-------RLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPT 64
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-----YTKLLAILGKA 241
+T M+++ GD + L K+ LK++FV + L+ L KA
Sbjct: 65 AYTYSSMIQVFMKGGDVQNGL-----------LMYKQMLKAKFVPDHTTFNILIDSLAKA 113
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
+ EA +F M + N+ PD+ Y + +LG +G + ++KL E M +
Sbjct: 114 DQVEEACNVFGDMFK-LNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGC------ 166
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
+P+L Y++V++A + + +F+Q+ + GL+P A TY + ++++ +
Sbjct: 167 ---------QPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGK 217
Query: 362 --------------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY-- 399
L+ + +G I + M+ +G+V Y
Sbjct: 218 TGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAI 277
Query: 400 ---------------------------YELAC------CLCNNGRWQDAMLVVEKIKSLR 426
Y++ CL GR + A + + +K +
Sbjct: 278 LIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMK-FK 336
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 485
+T+ LI G +D ++ M+++ C PNI T N ++ Y + S A
Sbjct: 337 GLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAA 396
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
LF E + P+ +YSS++E A + + +++ M GC
Sbjct: 397 TRLFLEMKERG-------------VAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGC 443
Query: 546 QLDQTKHAWLLVEASRAGK 564
+ + L+ RAG+
Sbjct: 444 PPNHVTYNLLIDCLIRAGR 462
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 120/304 (39%), Gaps = 48/304 (15%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
+K + +A +L+D + + + FV +S E LL LG KG +
Sbjct: 198 QKGLQPDAVTYNILIDAFGKTGQLERAFDFV---GKSRSFTNEVTYNSLLSSLGRKGDIQ 254
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
M + +K K + + Y L+ LG AGR + +++ L + D ++ DI
Sbjct: 255 GLMELFGQ---MKAKGLVSNELTYAILIERLGWAGRVEDVWQLY-LEMVDNDIKYDIVTI 310
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++V L + G ++ +L + M+ K L D V YN ++N +
Sbjct: 311 NNVLDCLSKAGRVEAAFELFQDMKFKG---------------LNADTVTYNILINGLGRA 355
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESY---------RRCLLKV------------ 366
+ + ++ ++G P+ TY + SY R L++
Sbjct: 356 GKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSY 415
Query: 367 --LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
L+ F + G+ + A++ R M+ G Y L CL GR+ AM E ++
Sbjct: 416 SSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAM---EYLRE 472
Query: 425 LRHS 428
+R +
Sbjct: 473 MRDA 476
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 73/169 (43%), Gaps = 15/169 (8%)
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
+P T++ +I M GG + + + +++ M K P+ T N ++ ++ D +A
Sbjct: 61 GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEAC 120
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
+F + + N S PD YTY+ ++ + T + + +++ M GCQ
Sbjct: 121 NVFGDMFKLNVS-------------PDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQ 167
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
+ + ++ AG+ F +++ G P + + +LI A
Sbjct: 168 PNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTY-NILIDAF 215
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 162/418 (38%), Gaps = 76/418 (18%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES----------- 358
+EP++VVY+++L S +W+ V VF ++ + G++P Y ++S
Sbjct: 181 IEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAH 240
Query: 359 ------YRRCL------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
RR L VL+ +EG + EA+ ++ M ++GV Y L L
Sbjct: 241 GVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGL 300
Query: 407 CNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 464
+ +AM L+ E ++ KP +TF +I D G + + M++ C
Sbjct: 301 SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMV 360
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
N+ T N ++ R KA EL +E T L+PD +TYS +++
Sbjct: 361 NLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG-------------LEPDSFTYSILIKGF 407
Query: 525 ATAHQW-----------------EYFEYVYKGMALSGCQ-------------------LD 548
Q E F Y+ +A+ C+ LD
Sbjct: 408 CKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAM--CEQGMMERARNLFNEMDNNFPLD 465
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
++ ++ A +AG + S+++ G P + ++ ++ + E A ++
Sbjct: 466 VVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLK 525
Query: 609 AMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 666
M + F + L + + +K+ +L+ + N A +S LS +L A
Sbjct: 526 QMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVA 583
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 95/459 (20%), Positives = 174/459 (37%), Gaps = 73/459 (15%)
Query: 135 GSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQML 194
G+ A ++E HP R A + VL+ L + + +R M +G+
Sbjct: 97 GALLRAMSLEPHPA--CRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYG 154
Query: 195 KLLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN 252
L++GL D +A+ ++ + G++ + VY+ LL K+GR + ++F
Sbjct: 155 TLIRGLCDAAEVDKAVELMGEMCESGIE-----PNVVVYSSLLQGYCKSGRWEDVGKVFV 209
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
M E + PD+ Y + +L +VG K+ +++ M ++ LEP
Sbjct: 210 EMSEK-GIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG---------------LEP 253
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCL--------- 363
++V YN ++N K V K++ + G+ P TY ++ L
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313
Query: 364 ----------------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+++ + G++ +A ME+ G + Y L L
Sbjct: 314 EEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLL 373
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
+ + AM +++++ SL +P T++ LI +D + M+D EP +
Sbjct: 374 RVHKVRKAMELMDEMTSL-GLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPEL 432
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTR---ANSSGYTFL------SGD----------- 506
+L M +A+ LF E + Y+ + +GD
Sbjct: 433 FHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492
Query: 507 -GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
L PD TYS ++ A + E V K M SG
Sbjct: 493 VDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASG 531
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/393 (20%), Positives = 144/393 (36%), Gaps = 61/393 (15%)
Query: 235 LAILGKAGRPHEA------LRIFNL-----MLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
LA+L + GR A LR+ L +L+ D +Y++V L + G
Sbjct: 37 LAVLHRRGRAEAAACLNRHLRLLPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRA 96
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
L+ M +P P P+ V Y ++ A + + +R +
Sbjct: 97 GALLRAMSLEPH------------PACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSA 144
Query: 344 GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
G++ TYG L+R + ++++AV + M + G+ VY L
Sbjct: 145 GVRADVVTYG------------TLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLL 192
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHC 462
C +GRW+D V ++ S + +P + +TGLI S G + M +
Sbjct: 193 QGYCKSGRWEDVGKVFVEM-SEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251
Query: 463 EPNIGT----VNAMLKVYSRNDMFSKAKELFEETTRANSSGY-TFLSGDGAPL------- 510
EPN+ T +N M K S + K++ E+ + Y T + G L
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311
Query: 511 ------------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
KP+ T++S+++ + V M +GC ++ + L+
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
R K D + G P ++ ++
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILI 404
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 72/182 (39%), Gaps = 35/182 (19%)
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV--- 270
D + ++D+ F Y LL + + G A +FN M D N D+ AY ++
Sbjct: 418 DLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM--DNNFPLDVVAYSTMIHG 475
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
A G + KEL+K I D L PD V Y+ V+N S
Sbjct: 476 ACKAGDLKTAKELLKSI------------------VDEGLTPDAVTYSIVINMFAKSGDM 517
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
+ V KQ+ SG P A + L++ + +G+IN+ + +R M +
Sbjct: 518 EAANGVLKQMTASGFLPDVAVF------------DSLIQGYSTKGEINKVLELIREMITK 565
Query: 391 GV 392
+
Sbjct: 566 NI 567
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 157/417 (37%), Gaps = 99/417 (23%)
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL 248
T +L L KGSW ++W + Y LL L GR +A+
Sbjct: 22 TNAGLLDAAANLLTKGSWFGCR--IEW-------------YAYNNLLNTLIAHGRAQDAV 66
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKN----- 300
+F ++D PD+ +++ V + +VG L++ ++L+ERM + P +N
Sbjct: 67 ALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVDG 126
Query: 301 -------------MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ R D V P++V Y +V++ + + K F V+ + +SG +P
Sbjct: 127 LCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRP 186
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ TY + + Y GK + +AVR +Y++L
Sbjct: 187 NTVTYNVLINGY---------------GKALDMESAVR------------MYWQL----- 214
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 465
+ HS P + +TF LI G +DD + I+ M + H +PN
Sbjct: 215 -----------------ILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPN 257
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T + ++ + ++A L E A + P + Y+ +++
Sbjct: 258 VYTFSIIIHSLCTQNRSAEALSLLRELNMR------------ADIVPQTFIYNPIIDILC 305
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ + + M GC D+ + L++ G+ F ++E G P
Sbjct: 306 KGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVETGCRP 362
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/361 (19%), Positives = 153/361 (42%), Gaps = 42/361 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ + +A +P AL + M ++ + + ++ L + G ++ + L++ +
Sbjct: 185 YTVLIGAMAEARQPERALELLRQM-QEVGYEVGVPLFTTLVRALAREGRVEGALALVDEV 243
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ LEPD+V+YN ++ + + F +L+ GLKP
Sbjct: 244 KGS---------------CLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDV 288
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+Y ++ VL +A G+++EA ME V A Y + + G
Sbjct: 289 SY--------TSMIWVLCKA----GRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAG 336
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVN 470
++++A +++++K R P ++F ++ +D+ +++F+ MK EPN T N
Sbjct: 337 QFENAYKLLDQLKE-RGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYN 395
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
++ + +A + +E A L P+ T + M++ A ++
Sbjct: 396 IIIDMLCMAGKVEEAYMIRDEMEHAG-------------LFPNLLTVNIMVDRLCKAKKF 442
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
E +++ + GC + + L+ + G F+++L+ G +P+ +T +
Sbjct: 443 EPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSL 502
Query: 591 L 591
+
Sbjct: 503 I 503
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 95/471 (20%), Positives = 180/471 (38%), Gaps = 91/471 (19%)
Query: 158 IRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
+ ++VDRL + + ++ +Q G L+ GLG KG+ A + +
Sbjct: 429 VNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFE--- 485
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM----------------------- 254
+ D + VYT L+ GR + +IF M
Sbjct: 486 NMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAG 545
Query: 255 --------LEDCNLY---PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR 303
ED Y PD+ +Y + L + G +E + M+Q+
Sbjct: 546 DVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQG--------- 596
Query: 304 KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCL 363
D YNAV++ S + + V ++++ + P+ ATYG
Sbjct: 597 ------FALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYG---------- 640
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
++ + +++EA + +G+ VY L GR +A L++E++
Sbjct: 641 --SIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMM 698
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT----VNAMLKVYSR 478
+ P T+ L+ + + I++ + FQ MK+ C PN T +N + +V
Sbjct: 699 K-KGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 757
Query: 479 NDMFSKAKELFEETTRANSSGYT-FLSG--------DGAPL---------KPDEYTYSSM 520
N F +E+ ++ N YT ++G D L PD +++++
Sbjct: 758 NKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNAL 817
Query: 521 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
+E + A++ +V++ L GC+++ K L++A +C LE A
Sbjct: 818 IEGMSHANRAIEAYHVFEETRLKGCRIN-VKACISLLDALNKAEC--LEQA 865
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 145/383 (37%), Gaps = 85/383 (22%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G G + A +LD LK++ + S + +L LGK + EAL +F M
Sbjct: 328 MIMGYGSAGQFENAYKLLDQ---LKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK 384
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+D P+ + Y+ + L G ++E + + M L P+L+
Sbjct: 385 KDAE--PNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAG---------------LFPNLL 427
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
N +++ + +++ + +F+ + G P++ TY C L+ ++G
Sbjct: 428 TVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTY---------C---SLIDGLGKKG 475
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+++A NM G VY L +GR +D
Sbjct: 476 NVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKED--------------------- 514
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
GH IF+ M + C+P++ +N + + K + +FE+
Sbjct: 515 ----------GH-----KIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDI-- 557
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
GY FL PD +YS ++ A Q ++ M G LD +
Sbjct: 558 ---KGYGFL--------PDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNA 606
Query: 555 LLVEASRAGKCHLLEHAFDSLLE 577
++ ++GK L+ A++ L E
Sbjct: 607 VVDGFCKSGK---LDKAYEVLEE 626
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/367 (19%), Positives = 138/367 (37%), Gaps = 42/367 (11%)
Query: 131 DVQLGSDYF--AKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMF 188
DV+ G F K + P+ R S +L+ L++ + M Q G
Sbjct: 546 DVEKGRAIFEDIKGYGFLPDVRSYS------ILIHGLTKAGQARETSSIFHAMKQQGFAL 599
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL 248
++ G G +A VL+ +K KR + Y ++ L K R EA
Sbjct: 600 DARAYNAVVDGFCKSGKLDKAYEVLEE---MKVKRVPPTVATYGSIIDGLAKIDRLDEAY 656
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP 308
+F + + ++ Y S+ G+VG + E ++E M +K
Sbjct: 657 MLFE-EAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKG-------------- 701
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLV 368
L P++ +N++++A V + + F+ +++ P+ TY +L+
Sbjct: 702 -LTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTY------------SILI 748
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
K N+A + M+++G+V Y + L G DA + E+ K+
Sbjct: 749 NGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKA-NGG 807
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
P +F LI + +F+ + C N+ ++L ++ + +A
Sbjct: 808 TPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAAV 867
Query: 488 L-FEETT 493
+ F E T
Sbjct: 868 VGFGENT 874
>gi|193848521|gb|ACF22711.1| PPR protein [Brachypodium distachyon]
Length = 292
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 37/296 (12%)
Query: 199 GLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC 258
G D+G W++A +VL ++ + D R Y ++ GK A+ FN M E+
Sbjct: 2 GFRDRGDWQKAFAVLREMHASGVQPD---RHFYNVMIDTFGKYNCLGHAMDAFNRMREE- 57
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
+ PD+ ++++ + G ++L E MR+ P YN
Sbjct: 58 GIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCP---------------PGTTTYN 102
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKIN 378
++N +W GV + ++++ GL P+ TY LV + G+
Sbjct: 103 IMINLLGEQERWVGVETMLSEMKEQGLVPNIITY------------TTLVDVYGRSGRFK 150
Query: 379 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS--LRHSKPLEITFT 436
EA+ + M+ G+ + ++Y+ L G A+ VV+ +++ L S +
Sbjct: 151 EAIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEAST---VVLN 207
Query: 437 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
L+ + + + + S+ Q MK++ P++ T ++K R + F K ++EE
Sbjct: 208 SLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEE 263
>gi|357140623|ref|XP_003571864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Brachypodium distachyon]
Length = 751
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 97/497 (19%), Positives = 191/497 (38%), Gaps = 81/497 (16%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
++ Y +L + GR A RI+N M+ D + PD++ Y+++ G ++ V+
Sbjct: 209 RTALSYNAVLKAILCRGREAMARRIYNAMIAD-GVAPDLSTYNTLIWGFGLSEKMEAAVR 267
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ M+ + PD+ YN ++NA V + + VF ++ +G
Sbjct: 268 VFGDMKGHG---------------VTPDVTTYNNLINAWVRNGDLESARKVFDEMPGAGF 312
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
+ ++ +Y V+++ + E K+ EAV + M ++G+ + + L
Sbjct: 313 ERNSVSY------------NVMIKGYVEAKKVEEAVGLFKEMGEKGLRSSEKTFAALMPG 360
Query: 406 LCNN-GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI------FQH- 457
LC++ GR +A VE + R + + F L+ + G +D + + F+H
Sbjct: 361 LCDDQGRTAEARKAVEDMAERRLTPKDKTVFLRLVTTLCKAGDLDGALEVHKKSGQFKHV 420
Query: 458 ----------MKDHCEPNI--GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
M+ C G V + ++ + + S + E A + +L
Sbjct: 421 LVDPRQYGVLMQSLCAGGKCDGAVEVLDELLEKGTLLSPKSPVLEAP--AYNPVIEYLCN 478
Query: 506 DGAPLKP-------------DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
+G K D+ ++S++ A E + + M G D H
Sbjct: 479 NGNTKKAETFFRQLMKKGVDDKLAFNSLIRGHAKEGVLEAAQEILAIMTRRGVPTDPISH 538
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 612
L+ + + + A DS++E G +P P F +++ + A ++ +M
Sbjct: 539 TLLVDSFLKKNEPADAKTALDSMMEQGHLPSPALFKSVMVALFDDGRVQTASRVMRSM-- 596
Query: 613 APFHITERQWTELFESNEDRISRDKLEKLL------NALCNCNAASSEITVSNLSRALHA 666
E+ TE N D ++ LE L A+ N + +L + L A
Sbjct: 597 -----IEKGVTE----NMD-MAHKILEALFMRGHVDEAIGRVNLMVENGCMPDLDKLLVA 646
Query: 667 LCRSEKERDLSSSAHFG 683
LC+ +K + A F
Sbjct: 647 LCQKDKVMEAHKLADFA 663
>gi|242074484|ref|XP_002447178.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
gi|241938361|gb|EES11506.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
Length = 643
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 167/400 (41%), Gaps = 67/400 (16%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
SR Y LL L AG A+ +F+ M + + PD+ +Y+ + + G ++ +
Sbjct: 206 SRLTYNCLLDGLVNAGLLDTAINVFDAMSTEDRVRPDVVSYNILIKGYCRAGRTQDGMSR 265
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +R++ L PD V Y ++ + +F+++ + G+
Sbjct: 266 LADLREQAE--------------LAPDKVTYLTLMQRHYSEGTFPQCIALFQEMEERGMG 311
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
+ + ++ A ++GK EA+A M +RG A++Y L +
Sbjct: 312 KEIPQHAYVL----------VIGALSKDGKPFEALAVFERMLKRGCPANAAMYTALIDSM 361
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD------ 460
GR ++AM + E++K+ +G+ + ++ G I +C+ F +M++
Sbjct: 362 GKLGREKEAMALFERMKA-----------SGIELDAVTYGVIVNCLCRFGNMEEALSCFR 410
Query: 461 HCEPNIGTVNAMLKV-----YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
C VNA+ + + M +AKELFEE + G+ PD Y
Sbjct: 411 SCVEKGVAVNAIFYTSLIDGFGKTGMVDQAKELFEEMI---AKGFV----------PDSY 457
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW-LLVEASRAGKCHLLEHAF-- 572
Y+ +++A A + + Y+ M GC DQT + + +L++ K H E A
Sbjct: 458 CYNVLIDALVKAGRTDIACAFYERMEDDGC--DQTVYTYTILIDG--LFKEHKNEEALKF 513
Query: 573 -DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
DS+++ G P F + + + +A +++ +A
Sbjct: 514 WDSMIDKGITPTAAAFRVLANGLCLSGKFSRAWRILDELA 553
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 107/264 (40%), Gaps = 31/264 (11%)
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+ W ++ +R +G++PS TY CLL LV A G ++ A+ M
Sbjct: 191 LLWAWQAMRLAGVEPSRLTY--------NCLLDGLVNA----GLLDTAINVFDAMSTEDR 238
Query: 393 VGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
V V Y + C GR QD M + ++ P ++T+ L+ G C
Sbjct: 239 VRPDVVSYNILIKGYCRAGRTQDGMSRLADLREQAELAPDKVTYLTLMQRHYSEGTFPQC 298
Query: 452 ISIFQHMKDHCE----PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
I++FQ M++ P V ++ S++ +A +FE + G
Sbjct: 299 IALFQEMEERGMGKEIPQHAYV-LVIGALSKDGKPFEALAVFERMLK-----------RG 346
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
P + Y++++++ + + +++ M SG +LD + ++ R G
Sbjct: 347 CPA--NAAMYTALIDSMGKLGREKEAMALFERMKASGIELDAVTYGVIVNCLCRFGNMEE 404
Query: 568 LEHAFDSLLEAGEIPHPLFFTEML 591
F S +E G + +F+T ++
Sbjct: 405 ALSCFRSCVEKGVAVNAIFYTSLI 428
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 169/443 (38%), Gaps = 56/443 (12%)
Query: 124 LNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQ 183
L + +DDV+ F R A + L+ L E + +F M +
Sbjct: 232 LGYCRNDDVERACGVFCV--------MPRRNAVSYTNLIHGLCEAGKLHEALEFWARMRE 283
Query: 184 SGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR-FVYTKLLAILGKAG 242
G T L+ L + G +A+S+ +G +R + + YT L+ L K G
Sbjct: 284 DGCFPTVRTYTVLVCALCESGRELEALSL----FGEMRERGCEPNVYTYTVLIDYLCKEG 339
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
R EAL++ N M+E + P + ++++ + + G++++ V ++ M K
Sbjct: 340 RMDEALKMLNEMVEK-GVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKK-------- 390
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
+ P++ YN ++ + ++ +S L P TY
Sbjct: 391 -------VCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTY---------- 433
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
L+ E G ++ A R M + G + CLC GR +A ++E +
Sbjct: 434 --NTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESL 491
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 481
K +H K E +T LI G I+ S+F+ M + C PN T N M+ +
Sbjct: 492 KE-KHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGK 550
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
A L E+ + + +KP +TY+ ++E + ++ + +
Sbjct: 551 VQDAMLLVEDMAKFD-------------VKPTLHTYNILVEEVLKEYDFDRANEILNRLI 597
Query: 542 LSGCQLDQTKHAWLLVEASRAGK 564
SG Q + + + G+
Sbjct: 598 SSGYQPNVVTYTAFIKAYCSQGR 620
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 87/452 (19%), Positives = 176/452 (38%), Gaps = 53/452 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F YT L+ + A +F +M + +Y ++ L + G L E ++
Sbjct: 225 FTYTSLVLGYCRNDDVERACGVFCVMPRR-----NAVSYTNLIHGLCEAGKLHEALEFWA 279
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
RMR+ P + Y ++ A S + +F ++R+ G +P+
Sbjct: 280 RMREDGCF---------------PTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPN 324
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY VL+ +EG+++EA+ + M ++GV + + L C
Sbjct: 325 VYTY------------TVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCK 372
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
G +DA+ V+ ++S + P T+ LI G +D +++ M + P++
Sbjct: 373 RGMMEDAVGVLGLMES-KKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVV 431
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T N ++ + A LF R DG PD++T+++ +
Sbjct: 432 TYNTLIHGLCEVGVVDSASRLFRLMIR-----------DG--FSPDQWTFNAFMVCLCRM 478
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHP 584
+ + + + + ++ + L+ +AGK +EHA F +L +P+
Sbjct: 479 GRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGK---IEHAASLFKRMLAEECLPNS 535
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNA 644
+ F M+ + + A+ L+ MA T + L E D+ ++LN
Sbjct: 536 ITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNR 595
Query: 645 LCNCNAASSEITVSNLSRALHALCRSEKERDL 676
L + + +T + +A + R E+ ++
Sbjct: 596 LISSGYQPNVVTYTAFIKAYCSQGRLEEAEEM 627
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 145/381 (38%), Gaps = 74/381 (19%)
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ +Y+ + + L + ++ E++ L K M N + V P+L+ N +LN+
Sbjct: 151 LTSYNRLLMCLSRFSMVDEMISLY-----------KEMLTDNGNSVF-PNLITLNTMLNS 198
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-----------CLL-------- 364
F ++ + P TY + Y R C++
Sbjct: 199 YCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSY 258
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
L+ E GK++EA+ M + G T Y L C LC +GR +A+ + +++
Sbjct: 259 TNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRE 318
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 483
R +P T+T LI G +D+ + + M + P++ NA++ Y + M
Sbjct: 319 -RGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMME 377
Query: 484 KA---------KELFEETTRANSSGYTFLSGDG-------------APLKPDEYTYSSML 521
A K++ N F G + L PD TY++++
Sbjct: 378 DAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLI 437
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQ-TKHAWL--LVEASRAGKCHLL---------- 568
+ +++ M G DQ T +A++ L R G+ H +
Sbjct: 438 HGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVK 497
Query: 569 --EHAFDSLLE----AGEIPH 583
EHA+ +L++ AG+I H
Sbjct: 498 ANEHAYTALIDGYCKAGKIEH 518
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 99/476 (20%), Positives = 198/476 (41%), Gaps = 63/476 (13%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
E WR E ++ L DR+ ++ K +FV ++ + ++FT ++K +G + SW
Sbjct: 159 EMNWR---ERVKFLTDRI----LSLKCDEFVGHVLEEHRVLFTPTDFCFVVKSVG-QSSW 210
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++A+ + + + ++ +R V T +L++LGKA + A+ IF + + +
Sbjct: 211 QRALELYECL-TMQQWYATNARMVAT-ILSVLGKANQEGIAVEIF--AKAESVIADTVQV 266
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQ------------------KPSKRIKNMHRKNWDP 308
Y+++ + G +++ ++ MR+ K + + + D
Sbjct: 267 YNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIELLDE 326
Query: 309 V----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL 364
V L PD++ YN +++AC K VF + + +P TY + Y RC
Sbjct: 327 VGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGF 386
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
+ +E+ K N G A Y L G + + E++
Sbjct: 387 ALKAEHLFEKLKSN------------GFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVK 434
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFS 483
+ K E+T+ +I G D+ + +++ MK P+ T ++ D+
Sbjct: 435 MGFGKD-EMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLI------DLLG 487
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
KA ++ EE ++ S A +KP +TYS+++ A A + E + M S
Sbjct: 488 KASKI-EEASKVMSEML------DAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRES 540
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
G + D ++ +L R + + ++EAG P + E+++ A+V+ N
Sbjct: 541 GIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLY-EVMLPALVREN 595
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/385 (19%), Positives = 158/385 (41%), Gaps = 60/385 (15%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV--TLGQVGLLKELV 284
S +Y ++++ + G P A + E ++ D H + + T G++ + +
Sbjct: 751 SECLYQSMVSVYCRIGFPETAQHLL-YHAEKNDIILDNVTVHIIDIIETYGKLKMWQSAE 809
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVL------------------------EPDLVVYNAV 320
++E +RQ+ SK M RK W+ ++ P + N +
Sbjct: 810 SIVENLRQRCSK----MDRKVWNALIHAYAFSGCYERARAIFNTMMREGPSPTVESVNGL 865
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA 380
L A + + ++ V ++L+ LK S ++ L +E AF + G + E
Sbjct: 866 LQALIVDGRLSELYVVIQELQDMDLKISKSSILLMLE------------AFAQAGNLFEV 913
Query: 381 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL-I 439
M+ G T +Y + LC R +D +++ ++ L+I + L +
Sbjct: 914 QKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKL 973
Query: 440 ISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
SS++ + I+Q ++D P+ T N ++ +Y R+ + +E + S
Sbjct: 974 YSSIE--EFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRD---HRPEEGLSLMHKMKSL 1028
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
G L+P TY SM+ A + ++ E +++ + +G +LD++ + ++
Sbjct: 1029 G----------LEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKM 1078
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPH 583
+G E+ + + EAG P+
Sbjct: 1079 YRTSGDHQKAENLLEIMKEAGIEPN 1103
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 16/184 (8%)
Query: 446 GHIDDCISIFQHMKDH-CEPNIGTVNAML--KVYSRNDMFSKAKELFEETTRANSSGYTF 502
G+ + +F M++ CEP+I + N ++ KV S + A EL +E +
Sbjct: 278 GNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIELLDEVGKFG------ 331
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
L+PD TY++++ A + + V+ M + CQ D + ++ R
Sbjct: 332 -------LRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRC 384
Query: 563 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQW 622
G EH F+ L G P + + +L + N EK + M F E +
Sbjct: 385 GFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTY 444
Query: 623 TELF 626
+
Sbjct: 445 NTII 448
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 132/325 (40%), Gaps = 61/325 (18%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
+L +AG E +++N M + +P + Y + +GLL R K
Sbjct: 900 MLEAFAQAGNLFEVQKVYNGM-KAAGYFPTMHLYRLM------IGLL---------CRFK 943
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ ++ M + + +PDL ++N+VL +++ + +++ ++ +GL P TY
Sbjct: 944 RVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETY- 1002
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
L+ + + + E ++ + M+ G+ Y + +
Sbjct: 1003 -----------NTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYD 1051
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLII----SSMDGGHIDDCISIFQHMKDHCEPNIGTV 469
A + E+++S + L+ +F L++ +S D ++ + I + EPN T+
Sbjct: 1052 QAEELFEELRS--NGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAG--IEPNTATM 1107
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
+ ++ Y ++ +A + + L GA L D YSS+++A
Sbjct: 1108 HLLMVSYGKSGQPEEADRILKN-----------LRTMGAVL--DTLPYSSVIDA------ 1148
Query: 530 WEYFEYVYKGMALSGCQ-LDQTKHA 553
Y+ KG A +G + L + K A
Sbjct: 1149 -----YLKKGDAKAGIEKLTEMKEA 1168
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 161/428 (37%), Gaps = 48/428 (11%)
Query: 131 DVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTE 190
DV + +F + + + K W S+ + L E M + K M GL+ +
Sbjct: 159 DVGVSFGHFVEQL-IYTYKDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISV 217
Query: 191 GQMLKLLKGLG-DKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALR 249
+ L D + A+ V + + S + T L LG+ H+ L
Sbjct: 218 DSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLL- 276
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
L +E PD+ +Y +V QVG L+ ++KLIE M+ K
Sbjct: 277 ---LQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKG--------------- 318
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L+P+ YN V+ + + V +++ G+ P Y L+
Sbjct: 319 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIY------------TTLID 366
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
F + G ++ A M++R + Y + C LC GR +A + ++ R +
Sbjct: 367 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR-LE 425
Query: 430 PLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P E+T+T LI G + + S+ Q ++ PNI T A+ + A EL
Sbjct: 426 PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANEL 485
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
E R L+ + YTY+S++ A + + K M ++G D
Sbjct: 486 LHEMCRKG-------------LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPD 532
Query: 549 QTKHAWLL 556
+ L+
Sbjct: 533 AVTYTTLM 540
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 137/352 (38%), Gaps = 56/352 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT L+ K G A R+F+ M + + PD Y +V L Q G + E KL
Sbjct: 360 IYTTLIDGFCKLGNVSSAYRLFDEM-QKRKISPDFITYTAVICGLCQTGRVMEADKLFHE 418
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K LEPD V Y A+++ + K F + Q+ + GL P+
Sbjct: 419 MVCKR---------------LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNI 463
Query: 350 ATYGLAMESYRRC-----------------------LLKVLVRAFWEEGKINEAVAAVRN 386
TY + +C LV + G I++AV +++
Sbjct: 464 VTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKD 523
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
ME G A Y L C + A ++ ++ R +P +TF L+ G
Sbjct: 524 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD-RELQPTVVTFNVLMNGFCMSG 582
Query: 447 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS-RNDMFSKAKELFEETTRANSSGYTFLS 504
++D + + M + PN T N+++K Y RN+M RA + Y +
Sbjct: 583 MLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM------------RATTEIYRGMC 630
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
G + PD TY+ +++ A + ++++ M G L + + L+
Sbjct: 631 AKG--VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALI 680
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 117/290 (40%), Gaps = 45/290 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ K G+ EA + N ML+ L P+I Y ++A L + G + +L+ M
Sbjct: 431 YTALIDGYCKEGKMKEAFSLHNQMLQ-MGLTPNIVTYTALADGLCKCGEVDTANELLHEM 489
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+K LE ++ YN+++N + + K + +G P A
Sbjct: 490 CRKG---------------LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAV 534
Query: 351 TYGLAMESY-------------RRCL----------LKVLVRAFWEEGKINEAVAAVRNM 387
TY M++Y R+ L VL+ F G + + ++ M
Sbjct: 535 TYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWM 594
Query: 388 EQRGVVGTASVYYELA--CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
++G++ A+ Y L C+ NN R A + + + P T+ LI
Sbjct: 595 LEKGIMPNATTYNSLIKQYCIRNNMR---ATTEIYRGMCAKGVVPDGNTYNILIKGHCKA 651
Query: 446 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
++ + + + M + + NA++K + + F +A+ELFE+ R
Sbjct: 652 RNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRR 701
>gi|293336971|ref|NP_001167873.1| uncharacterized protein LOC100381578 [Zea mays]
gi|223944573|gb|ACN26370.1| unknown [Zea mays]
gi|414585240|tpg|DAA35811.1| TPA: hypothetical protein ZEAMMB73_503732 [Zea mays]
Length = 640
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/400 (21%), Positives = 165/400 (41%), Gaps = 67/400 (16%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
SR Y LL L A A+ +F+ M + + PD+ +Y+ + + G ++ +
Sbjct: 203 SRLTYNCLLDGLVNADLLDTAINVFDAMSTEHRVRPDVVSYNILIKGYCRAGRTQDAMAR 262
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ MR+ L PD V Y ++ + +F+++ + G+
Sbjct: 263 LADMREHAE--------------LAPDKVTYLTLMQRHYSEATFPQCIALFQEMEERGMG 308
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
+ + ++ A ++GK EA+A M +RG A++Y L +
Sbjct: 309 KEIPQHAYVL----------VIGALSKDGKPFEALAVFERMSKRGCPANAAMYTALIDSM 358
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD------ 460
GR ++AM + E++K+ TG+ + ++ G + +C+ F ++++
Sbjct: 359 GKFGREKEAMALFERMKA-----------TGIELDAVTYGVVVNCLCRFGNLEEALACFR 407
Query: 461 HCEPNIGTVNAMLKV-----YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
C VNA+ + + M +AKELFEE + G+ PD Y
Sbjct: 408 SCVEKGVAVNAIFYTSLIDGFGKTGMVDQAKELFEEMV---AKGFV----------PDSY 454
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW-LLVEASRAGKCHLLEHAF-- 572
Y+ +++A A + + YK M GC DQT + + +L++ K H E A
Sbjct: 455 CYNVLIDALVKAGRTDDACAFYKRMEDDGC--DQTVYTYTILIDG--LFKEHKNEEALKF 510
Query: 573 -DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
DS+++ G P F + + + +A +++ +A
Sbjct: 511 WDSMIDKGITPTAAAFRALSNGLCLSGKFSRAWRILDELA 550
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 107/259 (41%), Gaps = 21/259 (8%)
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+ W ++ +R +G++PS TY CLL LV A + IN V + E R V
Sbjct: 188 LLWAWQAMRLAGVEPSRLTYN--------CLLDGLVNADLLDTAIN--VFDAMSTEHR-V 236
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 452
Y L C GR QDAM + ++ P ++T+ L+ CI
Sbjct: 237 RPDVVSYNILIKGYCRAGRTQDAMARLADMREHAELAPDKVTYLTLMQRHYSEATFPQCI 296
Query: 453 SIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
++FQ M++ +A + V SK + FE + + +S G P
Sbjct: 297 ALFQEMEERGMGKEIPQHAYVLVIG---ALSKDGKPFEAL-----AVFERMSKRGCP--A 346
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
+ Y++++++ + + +++ M +G +LD + ++ R G F
Sbjct: 347 NAAMYTALIDSMGKFGREKEAMALFERMKATGIELDAVTYGVVVNCLCRFGNLEEALACF 406
Query: 573 DSLLEAGEIPHPLFFTEML 591
S +E G + +F+T ++
Sbjct: 407 RSCVEKGVAVNAIFYTSLI 425
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 152/368 (41%), Gaps = 46/368 (12%)
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV--KLIERMRQ 292
+ + ++GR +A ++ + M D ++ PD+ +++++ + G L V +L+ +RQ
Sbjct: 1 MGVYARSGRFDDARQLLDAM-RDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQ 59
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
L PD + YN +++AC VF+++ S +P TY
Sbjct: 60 AG---------------LRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTY 104
Query: 353 GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
+ + RC GK EA + + ++G A Y L G
Sbjct: 105 NAMVSVHGRC------------GKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDV 152
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 471
+ V E++ K IT+ +I G +D + ++ M+ C P+ T
Sbjct: 153 ERVERVCEELVKAGFRKD-GITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTV 211
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
++ + D S+A ++ EE A LKP T+S+++ A A + + +
Sbjct: 212 LVDSLGKMDRISEAGKVLEEMADAG-------------LKPTLVTFSALICAYAKSGRQD 258
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
E + M SG + D+ + +L +R+ + L + ++++ G P + ++L
Sbjct: 259 DAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLY-QVL 317
Query: 592 IQAIVQSN 599
+ A+ + N
Sbjct: 318 LAALAKGN 325
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 110/265 (41%), Gaps = 19/265 (7%)
Query: 415 AMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 471
A + +E + +R + +P IT+ LI + G ++DD +++F+ M C P++ T NA
Sbjct: 47 AGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNA 106
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
M+ V+ R +A+ +F+E +PD TY+S+L A A E
Sbjct: 107 MVSVHGRCGKAQEAELMFKELVEKG-------------FQPDAVTYNSLLYAFAKEGDVE 153
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
E V + + +G + D + ++ + G+ L +D + G P + +T ++
Sbjct: 154 RVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLV 213
Query: 592 IQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAA 651
+A ++ MA A T ++ L + +D E+ + +
Sbjct: 214 DSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVK 273
Query: 652 SSEITVSNLSRALHALCRSEKERDL 676
+ + L RS++ R L
Sbjct: 274 PDRLAYLVM---LDVFARSDETRKL 295
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 129/314 (41%), Gaps = 32/314 (10%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWK-GV-FWVFKQLRKSGLKPSAATYGLAMESYRRCLL 364
D +EPDLV +N ++NA S GV + ++R++GL+P A TY
Sbjct: 22 DQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITY------------ 69
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
L+ A + +++AVA M Y + G+ Q+A L+ +++
Sbjct: 70 NTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVE 129
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFS 483
+ +P +T+ L+ + G ++ + + + K + T N M+ +Y +
Sbjct: 130 -KGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLD 188
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
A L++E + G T PD TY+ ++++ + V + MA +
Sbjct: 189 LALGLYDEM---RAIGCT----------PDAVTYTVLVDSLGKMDRISEAGKVLEEMADA 235
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
G + + L+ +++G+ E FD ++E+G P L + ML K
Sbjct: 236 GLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKL 295
Query: 604 VALINAM---AYAP 614
+ L AM Y P
Sbjct: 296 MVLYRAMIKDGYKP 309
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 71/174 (40%), Gaps = 16/174 (9%)
Query: 446 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK--AKELFEETTRANSSGYTF 502
G DD + M+D EP++ + N ++ +++ + A EL E +A
Sbjct: 8 GRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAG------ 61
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
L+PD TY++++ A + + V++ M S C+ D + ++ R
Sbjct: 62 -------LRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRC 114
Query: 563 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 616
GK E F L+E G P + + +L + + E+ + + A F
Sbjct: 115 GKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFR 168
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 129/333 (38%), Gaps = 89/333 (26%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G+ +G +A+ + D + G + D+ + Y L+ L K G A+R+ M+
Sbjct: 137 LIRGIYVEGKIGEALHLFDKMIGEGFRPDVVT---YGTLINGLCKVGNTSAAIRLLGSMV 193
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N P++ AY+++ +L + + E L M K + PD+
Sbjct: 194 QK-NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG---------------ISPDIF 237
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN++++A +WK V + ++ S + P ++ +V A +EG
Sbjct: 238 TYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSF------------NTVVDALCKEG 285
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
K+ EA V M QRGV +P +T+
Sbjct: 286 KVTEAHDVVDKMIQRGV------------------------------------EPNVVTY 309
Query: 436 TGLIISSMDG----GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
T L MDG +D+ + +F M C PN+ + N ++ Y + KA LF
Sbjct: 310 TAL----MDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFG 365
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
E R L PD TYS+++
Sbjct: 366 EMCRQE-------------LIPDTVTYSTLIHG 385
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/372 (18%), Positives = 131/372 (35%), Gaps = 63/372 (16%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ P++ + ++N+ ++ F V ++ K G +P AT+ L+R
Sbjct: 92 IPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATF------------TTLIR 139
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+ EGKI EA+ M G Y L LC G A+
Sbjct: 140 GIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIR------------ 187
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
++ SM ++ +C+PN+ N ++ ++ ++A LF
Sbjct: 188 ---------LLGSM--------------VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
E S PD +TY+S++ A +W++ + M S D
Sbjct: 225 SEMVTKGIS-------------PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 271
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
++ + GK D +++ G P+ + +T ++ + S ++AV + +
Sbjct: 272 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDT 331
Query: 610 MAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 669
M + L DK L +C +T S L +H LC
Sbjct: 332 MVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL---IHGLCH 388
Query: 670 SEKERDLSSSAH 681
E+ +D + H
Sbjct: 389 VERLQDAIALFH 400
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 173/429 (40%), Gaps = 59/429 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M GL E L++G ++G A+ + + G L + L+ K
Sbjct: 184 MANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGC---LLTNVSVKVLVNGFCK 240
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
GR EALR F L + + PD ++S+ ++G + + + +++ M +K
Sbjct: 241 EGRVEEALR-FVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKG------ 293
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+PD+ YN++++ +++ + +Q+ P+ TY
Sbjct: 294 ---------FDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTY-------- 336
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
L+ A +E +I A R + +G++ + L LC + AM + E
Sbjct: 337 ----NTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFE 392
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 479
++K+ + KP E T++ LI S + + + + + M+ C N N ++ ++
Sbjct: 393 EMKN-KGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKS 451
Query: 480 DMFSKAKELFEE-----TTRANSSGYTFLSG-------------------DGAPLKPDEY 515
A+E+F++ +R++ + T + G +G LKPD++
Sbjct: 452 RRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEG--LKPDKF 509
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
TY+S+L E + + MA +GC+ D + L+ RAG+ + S+
Sbjct: 510 TYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSV 569
Query: 576 LEAGEIPHP 584
G + P
Sbjct: 570 QMKGIVLTP 578
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/400 (18%), Positives = 169/400 (42%), Gaps = 50/400 (12%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
+++VLV+ + + +FV +++ G + L+ G G+ A+ ++D++
Sbjct: 230 SVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFM 289
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLG 275
D+ + Y L++ + K G +A+ I ++L +C+ P+ Y+++ L
Sbjct: 290 IEKGFDPDV---YTYNSLISGMCKLGEFEKAIEILQQMILRECS--PNTVTYNTLISAL- 343
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
++ + ++ R L PD+ +N ++ S
Sbjct: 344 --------------CKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAME 389
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+F++++ G KP TY +L+ + E ++ EA+ ++ ME G
Sbjct: 390 MFEEMKNKGCKPDEFTY------------SILIDSLCYERRLKEALMLLKEMESSGCARN 437
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
A VY L LC + R +DA + ++++ L S+ +T+ LI +++ +
Sbjct: 438 AVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRS-SVTYNTLIDGLCKNKRVEEASQLM 496
Query: 456 -QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 514
Q + + +P+ T N++L + R KA ++ + ++ +G +PD
Sbjct: 497 DQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQT-----------MASNGC--EPDI 543
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
+TY +++ A + + + + + + G L T HA+
Sbjct: 544 FTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVL--TPHAY 581
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 114/285 (40%), Gaps = 38/285 (13%)
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
K ++ +H K + + D+ +N ++ A +HQ + + +++ GLKP T+
Sbjct: 140 KLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTL 199
Query: 356 MESYRR------------------CLL-----KVLVRAFWEEGKINEAVAAVRNMEQRGV 392
M+ + CLL KVLV F +EG++ EA+ V + + G
Sbjct: 200 MQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGF 259
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 452
+ L C G DA+ +V+ + + P T+ LI G + I
Sbjct: 260 SPDQVTFNSLVNGFCRIGNVNDALDIVDFMIE-KGFDPDVYTYNSLISGMCKLGEFEKAI 318
Query: 453 SIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 511
I Q M C PN T N ++ + + A +L L G L
Sbjct: 319 EILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR-----------ILVSKG--LL 365
Query: 512 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
PD T++++++ + + +++ M GC+ D+ ++ L+
Sbjct: 366 PDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILI 410
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 62/328 (18%), Positives = 123/328 (37%), Gaps = 45/328 (13%)
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-----LLKVL-------------- 367
S + + + KQL+ SG P+A T+ ++S+ LLK+L
Sbjct: 68 SSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELGFKPDTNFYN 127
Query: 368 --VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+ A E+ K+ M G+V S + L LC + + A+L++E++ +
Sbjct: 128 IALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMAN- 186
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
KP EITFT L+ ++ G ++ + + + M + C +V ++ + + +
Sbjct: 187 HGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEE 246
Query: 485 AKELFEETTRANSS-----------GYTFLSGDGAPL-----------KPDEYTYSSMLE 522
A E + S G+ + L PD YTY+S++
Sbjct: 247 ALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLIS 306
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
++E + + M L C + + L+ + + L+ G +P
Sbjct: 307 GMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLP 366
Query: 583 HPLFFTEMLIQAIVQSNYEKAVALINAM 610
F ++ + N + A+ + M
Sbjct: 367 DVCTFNTLIQGLCLSKNQDIAMEMFEEM 394
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 158/392 (40%), Gaps = 55/392 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G QA +LD + K D+ +++ L+ L + GR EAL F M
Sbjct: 117 VINGFCKAGQVDQAFELLDEMKERGVKMDV---LLHSTLIQGLCRKGRIDEALEQFKSMG 173
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+C+ P++ Y++V L + + E ++L + M KR + H EPD++
Sbjct: 174 EECS--PNVITYNTVVNGLCKANRIDEALELFDDME----KRYEASHG------CEPDVI 221
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-----GLA-MESYRRCL------ 363
Y+ V++A + + + FK++R G P+ TY GL ++ CL
Sbjct: 222 SYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHM 281
Query: 364 -----------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
++ A W+ + +A + + G Y LC GR
Sbjct: 282 KEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRV 341
Query: 413 QDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
+A +++E ++S P IT++ +I G +D +F M H C P+ T
Sbjct: 342 DEAYRILLEMVES--KVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFM 399
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
+L +S + K++E F ++G+ P TY+ +++ A
Sbjct: 400 TLLHGFSEH---KKSREAFRVHEDMVNAGFI----------PGLQTYNVLMDCVCGADSV 446
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
E +Y M Q D +A L+ RA
Sbjct: 447 ESALEIYHKMKRKKRQPDCNTYAPLIQCLCRA 478
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 131/328 (39%), Gaps = 45/328 (13%)
Query: 295 SKRIKNMHR---KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP---- 347
+KR + HR + +P+ P+ ++Y V+N + Q F + ++++ G+K
Sbjct: 89 AKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLL 148
Query: 348 -SAATYGL--------AMESYR----RCLLKVL-----VRAFWEEGKINEAVAAVRNMEQ 389
S GL A+E ++ C V+ V + +I+EA+ +ME+
Sbjct: 149 HSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEK 208
Query: 390 R-----GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
R G Y + LC R A ++++++ P +T++ LI
Sbjct: 209 RYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV-GCAPNVVTYSSLIDGLCK 267
Query: 445 GGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
+C+ + HMK+ NI NAML +ND KA + FE ++
Sbjct: 268 VDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGK------ 321
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
KP+ TY+ + A + + + M S D ++ ++ +AG
Sbjct: 322 -------KPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 374
Query: 564 KCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + F ++ IPHP+ F +L
Sbjct: 375 RMDKADDVFTRMMVHECIPHPVTFMTLL 402
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/384 (19%), Positives = 138/384 (35%), Gaps = 85/384 (22%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM------- 290
L KAGR EA RI M+E + PD+ Y S+ + G + + + RM
Sbjct: 335 LCKAGRVDEAYRILLEMVES-KVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIP 393
Query: 291 -------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
K S+ +H + P L YN +++ + + ++
Sbjct: 394 HPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIY 453
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
++++ +P TY L++ L RA +++EA + ME VV +
Sbjct: 454 HKMKRKKRQPDCNTYAP--------LIQCLCRA----RRVDEAKEFLDVMEADNVVPNGA 501
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
+ + L LC G +A V++ + + +PL TF L+
Sbjct: 502 ICHALVEVLCKQGEVDEACSVLDNVVEV-GCQPLGETFKILV------------------ 542
Query: 458 MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD----GAP---- 509
++Y R + +K L A+++ Y+ + G P
Sbjct: 543 ---------------EELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAV 587
Query: 510 ----------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 559
++PDE TY ++L + + E ++ MA GC + L+ EA
Sbjct: 588 EVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEA 647
Query: 560 SRAGKCHLLEHAFDSLLEAGEIPH 583
A F++++ AG P
Sbjct: 648 CSADMADEAFRIFEAMVAAGFTPQ 671
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 102/484 (21%), Positives = 197/484 (40%), Gaps = 72/484 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
LLKGL D+ +QA+ +L + + V YT ++ L + G+ +A +F+ M
Sbjct: 173 LLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEM 232
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
L D + P+ Y+ + G KE + + +M + +EPD+
Sbjct: 233 L-DQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDG---------------VEPDV 276
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY--------RRCLLKV 366
V YN ++ + + VF + K G KP ++ YG + Y LL V
Sbjct: 277 VTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDV 336
Query: 367 LVR---------------AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
+VR A+ + G ++EA+ A M Q+G+ Y + LC G+
Sbjct: 337 MVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGK 396
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLI--ISSMDGGHIDDCISIFQHMKDHCEPNIGTV 469
DAM +++ S P + F LI + + D + +++ + C PN
Sbjct: 397 VDDAMSQFDRLIS-EGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGIC-PNTIFF 454
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANS-----------SGYT----------FLSG--- 505
N +L + M ++AK +F+ R + GY L G
Sbjct: 455 NTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVL 514
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
DG +KP+E TY++++ + E +++ MA G ++ +L + +
Sbjct: 515 DG--VKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRI 572
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAMAYAPFHITERQWTE 624
+ + +++ G I P+ +++Q + Q+N + A+ + + + FH+ R +
Sbjct: 573 AAAKELYLWMIKCG-IKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNI 631
Query: 625 LFES 628
+ ++
Sbjct: 632 MIDA 635
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/235 (18%), Positives = 88/235 (37%), Gaps = 18/235 (7%)
Query: 362 CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
C +++ G ++ A AA+ + + G A + L LC++ R DAM + +
Sbjct: 97 CTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALR 156
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-----KDHCEPNIGTVNAMLKVY 476
P ++ L+ D + + M + C P++ + ++
Sbjct: 157 RMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGL 216
Query: 477 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
R KA LF+E S P+ TY+ +L ++ + + +
Sbjct: 217 LREGQLDKAYCLFDEMLDQGMS-------------PNCITYNCLLHGYCSSGKPKEAIGI 263
Query: 537 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
++ M G + D + L+V + G+ FDS+++ G P + +L
Sbjct: 264 FRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLL 318
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 141/345 (40%), Gaps = 49/345 (14%)
Query: 183 QSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAG 242
++GL + LLK L +A++VL ++ + + + + F Y+ +L L
Sbjct: 185 RTGLKIHQITASTLLKCLCYANRTEEAVNVL--LHRMSELGCVPNVFSYSIILKGLCDNS 242
Query: 243 RPHEALRIFNLMLED---CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
AL +F +M ++ C+ P++ AY++V + G + L M ++ K
Sbjct: 243 MSQRALDLFQMMAKEGGACS--PNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVK--- 297
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
PD+V YN +++A + V +Q+ +G +P TY
Sbjct: 298 ------------PDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTY------- 338
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
++ + G++ EA R M+ RG++ + LC +GR ++A +
Sbjct: 339 -----NCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIF 393
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSR 478
+ + + H KP +++ L+ G D I +F MK + + N ++ Y++
Sbjct: 394 DSMTAKGH-KPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAK 452
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
M A +F E + S PD TYS+++ A
Sbjct: 453 RGMVDDAMLIFTEMQQQGVS-------------PDVVTYSTVISA 484
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/429 (19%), Positives = 163/429 (37%), Gaps = 64/429 (14%)
Query: 223 RDLKSR------FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
R +KSR + LA L K GR EA IF+ M + PDI +Y ++
Sbjct: 359 RKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGH-KPDIVSYCTLLHGYAS 417
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G +++ L M+ + D V+N +++A +
Sbjct: 418 EGWFADMIGLFNSMKSNG---------------IAADCRVFNILIHAYAKRGMVDDAMLI 462
Query: 337 FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
F ++++ G+ P TY ++ AF G++ +A+ M RG+
Sbjct: 463 FTEMQQQGVSPDVVTY------------STVISAFSRMGRLTDAMEKFNQMVARGIQPNT 510
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
+VY+ + C +G A +V ++ + +P + F +I S G + D IF
Sbjct: 511 AVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFD 570
Query: 457 HMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
+ D E P++ T +++ Y KA ++ + + ++ D
Sbjct: 571 LVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAM-------------EVVGVETDIV 617
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
TYS++L+ + +++ M G + + + +L RAG+ F +
Sbjct: 618 TYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEM 677
Query: 576 LEAGEIPHPLFF---------------TEMLIQAIVQSNYEKAVALINAMAYAPFHITER 620
+E+G + +L Q + N + ++ ++N M A + + +
Sbjct: 678 IESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRK 737
Query: 621 QWT-ELFES 628
+ ELF +
Sbjct: 738 EEAKELFAT 746
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 84/214 (39%), Gaps = 24/214 (11%)
Query: 405 CLCNNGRWQDAMLVV----EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 460
CLC R ++A+ V+ ++ + + I GL +SM +D +FQ M
Sbjct: 201 CLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALD----LFQMMAK 256
Query: 461 H---CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
C PN+ N ++ + + KA LF E TR +KPD TY
Sbjct: 257 EGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQG-------------VKPDVVTY 303
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+ +++A A + E V + M +G Q D + ++ + G+ F +
Sbjct: 304 NLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKS 363
Query: 578 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
G IP+ + L ++A + ++M
Sbjct: 364 RGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMT 397
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 183/437 (41%), Gaps = 55/437 (12%)
Query: 149 KRWRSEAEAIRVL----VDRLSEREMTAKNWKFVR-IMNQSGLMFTEGQMLKLLKGLGDK 203
K +R EA R V + ER + +W V ++N+ F+ L++ +
Sbjct: 80 KHYRLRVEADRFQKDWSVSEVVERLLKLNHWDDVEGLLNRWVGRFSRKNFPLLIREITQI 139
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
GS ++ V W +K++++ +R +Y ++ + + +A +F ++ P
Sbjct: 140 GSLEHSVQVFRW---MKNQKNYCARNDIYNMMIRLHARHNIVDQARGLF-FEMQKWRCKP 195
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D Y+++ G+ G + + +++ M + + P YN ++N
Sbjct: 196 DAETYNALINAHGRAGQWRWAMNIMDDMLRA---------------AIPPSRSTYNNLIN 240
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA 382
AC S WK V K++ ++G+ P T+ + + +Y+R V +++E K
Sbjct: 241 ACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGT---- 296
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR-HSKPLEITFTGLIIS 441
N+ +Y CL G+ A+ + +K R P +TFT +I
Sbjct: 297 ---NIRPDTTTLNIVIY-----CLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHL 348
Query: 442 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
G I++C + F M + +PNI + NA++ Y+ + M +A +F E + +G+
Sbjct: 349 YSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKK---NGF 405
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
PD +Y+S+L A + + E V++ M + C+ + + L+
Sbjct: 406 ----------HPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYG 455
Query: 561 RAGKCHLLEHAFDSLLE 577
G LL A + L E
Sbjct: 456 SKG---LLTEAVEILHE 469
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 152/386 (39%), Gaps = 72/386 (18%)
Query: 213 LDWVYGLKDKRD--LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
+D +K+KR +T ++ + G+ FN ML + L P+I +Y+++
Sbjct: 322 IDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAE-GLKPNIVSYNAL 380
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
G+ KE + +++ PD+V Y ++LNA S +
Sbjct: 381 IGAYASHGMDKEAFSVFNEIKKNG---------------FHPDVVSYTSLLNAYGKSGKP 425
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
+ VF+ +R++ KP+ +Y L+ A+ +G + EAV + ME+
Sbjct: 426 EKAMKVFELMRRNHCKPNLVSY------------NALIDAYGSKGLLTEAVEILHEMERN 473
Query: 391 GV-VGTASVYYELACCLCNNGRWQDAMLVVEKIKS------LRHSKPLEITFTGLIISSM 443
GV S+ LA C GR + KIKS LR K + I S +
Sbjct: 474 GVQPNIVSICTLLAAC----GRCGQKV----KIKSVLSAAELRGIKLNTTAYNSAIGSYL 525
Query: 444 DGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKA---------------KE 487
G D +S+++ M+ +P+ T N ++ + + +A KE
Sbjct: 526 SVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKE 585
Query: 488 LFEETTRANS---------SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
++ A S S +T + G +PD TY++M+ A A WE ++
Sbjct: 586 VYSSVICAYSKQGQVTEAESMFTKMKMVGC--RPDVITYTAMIHAYDVAENWEKASALFL 643
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGK 564
M Q D + L+ ++ G+
Sbjct: 644 EMETDDVQPDSIACSSLMRAFNKGGQ 669
>gi|449525698|ref|XP_004169853.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Cucumis sativus]
Length = 494
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 195/447 (43%), Gaps = 57/447 (12%)
Query: 152 RSEAEA-IRVLVDRLSEREMTAKNW-KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQA 209
RSEAE +R ++ S++E K K+VR+M TE L L + LG + W +
Sbjct: 58 RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMR------TEHCFL-LFEELGKRDKWLEC 110
Query: 210 MSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS 269
+ V W+ K + + VY+KL++I+GK G+ A+ +F+ M + PD + Y++
Sbjct: 111 LEVFRWMQ--KQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEM-RNSGCRPDTSVYNA 167
Query: 270 -VAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
+ L K LVK++ +++K M R +P++V YN + A +
Sbjct: 168 LITAHLHSKDKAKALVKVLSYF-----EKMKGMER------CKPNIVTYNILTRAFAQAA 216
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ V +FK L +S + TY M++Y + G I E + M+
Sbjct: 217 KVDQVNTLFKDLDESVVSADIYTYNGVMDAYGK------------NGNIKEMELMLARMK 264
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEITFTGLIISSMDGG 446
+ + L + + G+ Q + + KSL SK P TF +I +
Sbjct: 265 SNQIKPDIISFNLL---IDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKAR 321
Query: 447 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
+ +F+ MKD +P+ T +++ +Y D SKA+E+F+ NS +S
Sbjct: 322 LREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGM--VNSGKEVRVST 379
Query: 506 DGAPLKPDEYTYSSM-LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
A L D Y + + LEA + +++ D T + L ++A K
Sbjct: 380 LNAML--DVYCINGLPLEA----------DLLFESAGNMRVFPDSTTYKLLYKAYTKADK 427
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEML 591
LLE ++ +AG IP+ FF + L
Sbjct: 428 KELLEKLLKNMDKAGIIPNKRFFLDAL 454
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 151/394 (38%), Gaps = 53/394 (13%)
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
NL P Y+S+ Q G ++ + L+ +M ++ + +L +Y
Sbjct: 117 NLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEG---------------FQGNLGLYT 161
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC---------------- 362
VLN + F +L+ GL P+AATYG ++ + +
Sbjct: 162 TVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKH 221
Query: 363 -------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+ +++ + G A +M G+ +Y L C GR A
Sbjct: 222 GVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKA 281
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLK 474
+ V+E I++ R +E T+T ++ + GG+I + +F +K P + + N++L
Sbjct: 282 LGVLENIEANRLLPTIE-TYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLS 340
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
++ A+ + E AN + P+E +Y+++ E A A E
Sbjct: 341 GLAKARQMENARLMLNEML-ANG------------VVPNERSYTALTEGYARAGDVEKAF 387
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 594
+++ M +D + LL ++G F + +AG + + + ML
Sbjct: 388 GMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGW 447
Query: 595 IVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
+ KA L+N M FH+ +T ++
Sbjct: 448 ARKGELSKARDLLNDMQKHGFHLDTICYTSFIKA 481
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/369 (19%), Positives = 137/369 (37%), Gaps = 76/369 (20%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT +L + + L F+ L+ C L P A Y + + G + + + ++E
Sbjct: 159 LYTTVLNGFAEIRDEEKCLSFFH-RLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEE 217
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + + P+ ++Y +++ + F V++ + +GLKP
Sbjct: 218 MDKHG---------------VSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDI 262
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
Y +LV AF + G++++A+ + N+E ++ T Y +
Sbjct: 263 VIY------------NILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKG 310
Query: 410 GRWQDAMLVVEKIKS--LRHS--------------------------------KPLEITF 435
G Q A+ V ++IK+ LR P E ++
Sbjct: 311 GNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSY 370
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
T L G ++ +FQ M K++ +I A+LK ++ +A E+F++ T
Sbjct: 371 TALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITD 430
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
A LK + TY +ML+ A + + M G LD +
Sbjct: 431 AG-------------LKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTS 477
Query: 555 LLVEASRAG 563
+ R+G
Sbjct: 478 FIKACFRSG 486
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 40/268 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L G G+ ++A+ V D + + + S Y LL+ L KA + A + N ML
Sbjct: 303 ILDGYVKGGNIQKALEVFDRIKTAGLRPGVVS---YNSLLSGLAKARQMENARLMLNEML 359
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + P+ +Y ++ + G +++ + +RM+++ L D+V
Sbjct: 360 AN-GVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKEN---------------LAIDIV 403
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y A+L AC S + VF+Q+ +GLK + TY ++ + R +G
Sbjct: 404 AYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWAR------------KG 451
Query: 376 KINEAVAAVRNMEQRGV-VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI- 433
++++A + +M++ G + T + C R D V E + +R K LE+
Sbjct: 452 ELSKARDLLNDMQKHGFHLDTICYTSFIKACF----RSGDTEEVTETLAVMRE-KKLEVN 506
Query: 434 --TFTGLIISSMDGGHIDDCISIFQHMK 459
T+T LI + D IS ++ K
Sbjct: 507 ARTYTTLIHGWLAAADPDQAISCYEQAK 534
>gi|298706415|emb|CBJ29411.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 416
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 143/364 (39%), Gaps = 44/364 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L K GR EAL + M ED + D+ AY + G +E V ++ M
Sbjct: 13 YSIGLTACAKGGRWQEALVLLREMEEDDEIKLDVVAYSAAITACANGGRWQEAVAILSDM 72
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
P+ ++ P+++ NA + A + QW+ + + + K+GL P A
Sbjct: 73 ---PNVGVR------------PNVISCNAAIKAWGEAGQWQHALSILRGMSKAGLSPDAI 117
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC--N 408
+Y A + A G+ +A + M + G+ T Y +
Sbjct: 118 SYNTA------------ISALGVAGQSEQAQELMSEMSRLGIEPTVVTYNSAIAAIARGG 165
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 467
G+W+ A+ +V+ + SL P IT+ LI++ GG +S+ + MK +I
Sbjct: 166 GGQWRQAVALVKHM-SLAGVTPDSITYNSLIVACGKGGQWKQALSVLKGMKKQGLSCDII 224
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
+A + + + L E A S G T PD Y++ + A A A
Sbjct: 225 GYSAAISACGEAGQWEYSVGLLAE---AKSLGIT----------PDLVAYTAAVTACADA 271
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
+Q + ++ K M +G + D L+ G+ +S+ + G + + +
Sbjct: 272 NQRDKATFLLKEMLSAGIRPDAAAFTSLIAALGHDGQWTQAVEILESMPKMGAPRNAMVY 331
Query: 588 TEML 591
++
Sbjct: 332 NALI 335
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 112/294 (38%), Gaps = 36/294 (12%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
+K G+ G W+ A+S+L G+ Y ++ LG AG+ +A + + M
Sbjct: 88 IKAWGEAGQWQHALSIL---RGMSKAGLSPDAISYNTAISALGVAGQSEQAQELMSEM-S 143
Query: 257 DCNLYPDIAAYHS--VAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ P + Y+S A+ G G ++ V L++ M + PD
Sbjct: 144 RLGIEPTVVTYNSAIAAIARGGGGQWRQAVALVKHMSLAG---------------VTPDS 188
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+ YN+++ AC QWK V K ++K GL Y A + A E
Sbjct: 189 ITYNSLIVACGKGGQWKQALSVLKGMKKQGLSCDIIGYSAA------------ISACGEA 236
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
G+ +V + + G+ V Y A C + +D + K +P
Sbjct: 237 GQWEYSVGLLAEAKSLGITPDL-VAYTAAVTACADANQRDKATFLLKEMLSAGIRPDAAA 295
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKE 487
FT LI + G + I + M P N NA++ ++ N +K +E
Sbjct: 296 FTSLIAALGHDGQWTQAVEILESMPKMGAPRNAMVYNALITSWA-NAEVAKGEE 348
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 183/437 (41%), Gaps = 55/437 (12%)
Query: 149 KRWRSEAEAIRVL----VDRLSEREMTAKNWKFVR-IMNQSGLMFTEGQMLKLLKGLGDK 203
K +R EA R V + ER + +W V ++N+ F+ L++ +
Sbjct: 80 KHYRLRVEADRFQKDWSVSEVVERLLKLNHWDDVEGLLNRWVGRFSRKNFPLLIREITQI 139
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
GS ++ V W +K++++ +R +Y ++ + + +A +F ++ P
Sbjct: 140 GSLEHSVQVFRW---MKNQKNYCARNDIYNMMIRLHARHNIVDQARGLF-FEMQKWRCKP 195
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D Y+++ G+ G + + +++ M + + P YN ++N
Sbjct: 196 DAETYNALINAHGRAGQWRWAMNIMDDMLRA---------------AIPPSRSTYNNLIN 240
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA 382
AC S WK V K++ ++G+ P T+ + + +Y+R V +++E K
Sbjct: 241 ACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGT---- 296
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR-HSKPLEITFTGLIIS 441
N+ +Y CL G+ A+ + +K R P +TFT +I
Sbjct: 297 ---NIRPDTTTLNIVIY-----CLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHL 348
Query: 442 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
G I++C + F M + +PNI + NA++ Y+ + M +A +F E + +G+
Sbjct: 349 YSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKK---NGF 405
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
PD +Y+S+L A + + E V++ M + C+ + + L+
Sbjct: 406 ----------HPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYG 455
Query: 561 RAGKCHLLEHAFDSLLE 577
G LL A + L E
Sbjct: 456 SKG---LLTEAVEILHE 469
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 153/391 (39%), Gaps = 72/391 (18%)
Query: 208 QAMSVLDWVYGLKDKRD--LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
Q +D +K+KR +T ++ + G+ FN ML + L P+I
Sbjct: 317 QNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAE-GLKPNIV 375
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
+Y+++ G+ KE + +++ PD+V Y ++LNA
Sbjct: 376 SYNALIGAYASHGMDKEAFSVFNEIKKNG---------------FHPDVVSYTSLLNAYG 420
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
S + + VF+ +R++ KP+ +Y L+ A+ +G + EAV +
Sbjct: 421 KSGKPEKAMKVFELMRRNHCKPNLVSY------------NALIDAYGSKGLLTEAVEILH 468
Query: 386 NMEQRGV-VGTASVYYELACCLCNNGRWQDAMLVVEKIKS------LRHSKPLEITFTGL 438
ME+ GV S+ LA C GR + KIKS LR K +
Sbjct: 469 EMERNGVQPNIVSICTLLAAC----GRCGQKV----KIKSVLSAAELRGIKLNTTAYNSA 520
Query: 439 IISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKA------------ 485
I S + G D +S+++ M+ +P+ T N ++ + + +A
Sbjct: 521 IGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKI 580
Query: 486 ---KELFEETTRANS---------SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
KE++ A S S +T + G +PD TY++M+ A A WE
Sbjct: 581 PLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGC--RPDVITYTAMIHAYDVAENWEKA 638
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
++ M Q D + L+ ++ G+
Sbjct: 639 SALFLEMETDDVQPDSIACSSLMRAFNKGGQ 669
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 144/372 (38%), Gaps = 56/372 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL--I 287
V+ ++ + ++GR +A ++ + M D + PD+ +++++ + G L V L +
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDTM-HDRGIDPDLVSFNTLINARSKSGCLAAGVALDLL 281
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+RQ L PD++ YN +++AC S + VF+ + S +P
Sbjct: 282 FEVRQSG---------------LRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRP 326
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
TY + + RC GK EA R + ++G + A Y L
Sbjct: 327 DLWTYNAMVSVHGRC------------GKAEEAERLFRELVEKGFMPDAITYNSLLYAFA 374
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
G E++ K EIT+ +I G +D + ++ M+ C P+
Sbjct: 375 KEGNVDKVEHTCEQLVKAGFKKN-EITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDA 433
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETT-----------------------RANSSGYTFL 503
T M+ + + ++A ++ E+ T RA++ TF
Sbjct: 434 VTYTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAEN-TFD 492
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
+ +KPD Y ML+ A + E +Y+ M + D + LLV ++
Sbjct: 493 CMIASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKED 552
Query: 564 KCHLLEHAFDSL 575
KC +E +
Sbjct: 553 KCEEIEEVIQDM 564
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 78/423 (18%), Positives = 176/423 (41%), Gaps = 48/423 (11%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S+ +Y +++ K G P A R+ + L+ ++ + G++ L ++ L
Sbjct: 709 SKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQAEIL 768
Query: 287 IERMRQKPS--KRIKN--MH-----------RKNWDPVLE----PDLVVYNAVLNACVPS 327
++ +RQ +RI N +H R +D +++ P + N ++ A +
Sbjct: 769 VKGLRQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVD 828
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ ++ V ++L+ K S +T + +L+ AF + G + E + M
Sbjct: 829 GRLDELYVVVEELQDMNFKISKST------------VLLLLDAFAKAGDVFEVMKIYNGM 876
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+ G + +Y + LC++ R++D L++ +++ L I L+ G+
Sbjct: 877 KAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAI-LNALLNMYTAAGN 935
Query: 448 IDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
D +++ ++ EP+ T N ++ +Y R+ + +E G+T L+
Sbjct: 936 FDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRS---FRPEE-----------GFTLLNEM 981
Query: 507 GA-PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
G L P +Y S+L ASA A E + +++ M QL+++ + ++ AG
Sbjct: 982 GKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNH 1041
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 625
E+ + E G P ++ +A ++N + + ++ ++ +
Sbjct: 1042 SKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTV 1101
Query: 626 FES 628
F++
Sbjct: 1102 FDA 1104
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 24/186 (12%)
Query: 465 NIGTVNAMLKVYSRNDMFSKAKEL---------------FEETTRANSSGYTFLSGDG-- 507
+ NAM+ VY+R+ F A++L F A S +G
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALD 279
Query: 508 -------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
+ L+PD TY++++ A + + E V++ M S C+ D + ++
Sbjct: 280 LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHG 339
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 620
R GK E F L+E G +P + + +L + N +K + A F E
Sbjct: 340 RCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEI 399
Query: 621 QWTELF 626
+ +
Sbjct: 400 TYNTMI 405
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 132/342 (38%), Gaps = 44/342 (12%)
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
K +++++ + D ++PD+V N ++ A +HQ + + +++ + P T+
Sbjct: 177 KLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTL 236
Query: 356 MESY-----------------------RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
M+ + R + VL+ + + G++ +A+ ++ G
Sbjct: 237 MQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGF 296
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 452
Y CLC NG A+ V++ + H P T+ +I G +D+
Sbjct: 297 EPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHD-PDVFTYNTVINCLSKNGELDEAK 355
Query: 453 SIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 511
I M D C P+ T N ++ + +A +L E T L
Sbjct: 356 GIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKG-------------LS 402
Query: 512 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
PD YT++ ++ A +++ M SGC D+ + L+ GK L +A
Sbjct: 403 PDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGK---LVNA 459
Query: 572 FDSL--LEAGEIPHPLFFTEMLIQAIV-QSNYEKAVALINAM 610
D L +E+ P +I A+ Q E+A + + M
Sbjct: 460 LDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQM 501
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 84/445 (18%), Positives = 168/445 (37%), Gaps = 55/445 (12%)
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALR 249
E L++G ++GS A+ V + + +R L+ K GR +AL
Sbjct: 230 ETTFTTLMQGFIEEGSIEAALRVKTK---MMETGCSPTRVTVNVLINGYCKMGRVEDALG 286
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
+ D PD Y++ L Q G + +K+++ M Q+
Sbjct: 287 YIQKEIAD-GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGH-------------- 331
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+PD+ YN V+N + + + Q+ G P T+ L+
Sbjct: 332 -DPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTF------------NTLIV 378
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
A + ++ EA+ R + +G+ + L LC G + + E++KS
Sbjct: 379 ALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKS-SGCA 437
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P E+T+ LI G + + + + + M+ + C + T N ++ + +A+E+
Sbjct: 438 PDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEV 497
Query: 489 FEE-----TTRANSSGYTFLSG-------DGAP----------LKPDEYTYSSMLEASAT 526
F++ +R+ + T + G D A L+P TY+S+L
Sbjct: 498 FDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCK 557
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
+ + + M +G ++D + L+ +AG+ + + G P P
Sbjct: 558 QGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKA 617
Query: 587 FTEMLIQAIVQSNYEKAVALINAMA 611
+ ++ ++N A++L M
Sbjct: 618 YNPVIQSLFRRNNLRDALSLFREMT 642
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 100/256 (39%), Gaps = 34/256 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + L+ L K G PH +R+F M + PD Y+ + L +G L + L++
Sbjct: 406 YTFNILINALCKVGDPHLGIRLFEEM-KSSGCAPDEVTYNILIDHLCSMGKLVNALDLLK 464
Query: 289 RMRQKPSKR------------IKNMHRKNWDPVLEP--------DLVVYNAVLNACVPSH 328
M R K M + + V + V +N +++ +
Sbjct: 465 EMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAK 524
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ + +Q+ K GL+PS TY + Y ++G + +A + M
Sbjct: 525 RIDDATELIEQMVKEGLQPSNITYNSILTHY------------CKQGDLKKAADILETMT 572
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
G Y L LC GR Q A+ ++ ++ ++ +P + +I S ++
Sbjct: 573 ANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR-IKGIRPTPKAYNPVIQSLFRRNNL 631
Query: 449 DDCISIFQHMKDHCEP 464
D +S+F+ M + EP
Sbjct: 632 RDALSLFREMTEVGEP 647
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 163/377 (43%), Gaps = 48/377 (12%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILG 239
M + G+ E L+ + G W A VL + + D++ + FV+++LLA
Sbjct: 365 MEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEM----EAGDVQPNSFVFSRLLAGFR 420
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
G + ++ M + + PD Y+ V T G+ L + +RM +
Sbjct: 421 DRGEWQKTFQVLKEM-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG----- 474
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+EPD V +N +++ + +F+ + + G P A TY + + SY
Sbjct: 475 ----------IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY 524
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
+ W++ K + M+ +G++ + L +GR+ DA+ +
Sbjct: 525 GD-------QERWDDMK-----RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 572
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 478
E++KS+ KP + LI + G + ++ F+ M D +P++ +N+++ +
Sbjct: 573 EEMKSV-GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE 631
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
+ ++A + + ++ +G +KPD TY+++++A +++ VY+
Sbjct: 632 DRRDAEAFAVLQ-----------YMKENG--VKPDVVTYTTLMKALIRVDKFQKVPVVYE 678
Query: 539 GMALSGCQLDQTKHAWL 555
M +SGC+ D+ + L
Sbjct: 679 EMIMSGCKPDRKARSML 695
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 151/395 (38%), Gaps = 48/395 (12%)
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+DK +L + V ++ K+G P +AL++ M + L A S+ L G
Sbjct: 262 RDKLELDVQLVNDIIMG-FAKSGDPSKALQLLG-MAQATGLSAKTATLVSIISALADSGR 319
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
E L E +RQ K P YNA+L V + K + +
Sbjct: 320 TLEAEALFEELRQSGIK---------------PRTRAYNALLKGYVKTGPLKDAESMVSE 364
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ K G+ P TY L +++Y WE +I ++ ME V + V+
Sbjct: 365 MEKRGVSPDEHTYSLLIDAYVNA-------GRWESARI-----VLKEMEAGDVQPNSFVF 412
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH-IDDCISIFQHM 458
L + G WQ V++++KS+ KP + F ++I + + +D ++ F M
Sbjct: 413 SRLLAGFRDRGEWQKTFQVLKEMKSI-GVKP-DRQFYNVVIDTFGKFNCLDHAMTTFDRM 470
Query: 459 -KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
+ EP+ T N ++ + ++ A+E+FE R P TY
Sbjct: 471 LSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC-------------LPCATTY 517
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+ M+ + +W+ + + M G + H L+ ++G+ + + +
Sbjct: 518 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 577
Query: 578 AGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAMA 611
G P + LI A Q E+AV M
Sbjct: 578 VGLKPSSTMYNA-LINAYAQRGLSEQAVNAFRVMT 611
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 117/299 (39%), Gaps = 50/299 (16%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC------------ 362
+ YNA++ AC ++ + + ++R+ G + Y L ++S R
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 363 -------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
L+ ++ F + G ++A+ + + G+ + + L ++
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 410 GRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
GR +A + E+ LR S KP + L+ + G + D S+ M K P+
Sbjct: 318 GRTLEAEALFEE---LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDE 374
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T + ++ Y + A+ + +E +GD ++P+ + +S +L
Sbjct: 375 HTYSLLIDAYVNAGRWESARIVLKEME----------AGD---VQPNSFVFSRLLAGFRD 421
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIP 582
+W+ V K M G + D+ + V GK + L+HA FD +L G P
Sbjct: 422 RGEWQKTFQVLKEMKSIGVKPDRQFYN---VVIDTFGKFNCLDHAMTTFDRMLSEGIEP 477
>gi|26449475|dbj|BAC41864.1| unknown protein [Arabidopsis thaliana]
gi|29028966|gb|AAO64862.1| At5g25630 [Arabidopsis thaliana]
Length = 574
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 171/424 (40%), Gaps = 75/424 (17%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG---QVGL 279
R ++SR TKL+ +L + GRPHEA +F + E + P + +Y ++ + Q G
Sbjct: 43 RTVRSR---TKLMNVLIERGRPHEAQTVFKTLAETGH-RPSLISYTTLLAAMTVQKQYGS 98
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ +V +E+ K D + +NAV+NA S + +
Sbjct: 99 ISSIVSEVEQSGTKL------------------DSIFFNAVINAFSESGNMEDAVQALLK 140
Query: 340 LRKSGLKPSAAT-------YGLAMESYRRCLL-------------------KVLVRAFWE 373
+++ GL P+ +T YG+A + R L VLV+A+ +
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLE 432
+ K+ EA V+ ME+ GV Y +A C G A VVEK+ +KP
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI----GTVNAMLKVYSRNDMFSKAKE 487
T ++ G + D + + MK+ E N+ +N ++V R D +
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR-DGIDEVLT 319
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
L +E +K D TYS+++ A ++A E V+K M +G +
Sbjct: 320 LMKECN----------------VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 363
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 607
D ++ L RA E ++L+ P+ + FT ++ + + A+ +
Sbjct: 364 DAHAYSILAKGYVRAKGPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMDDAMRVF 422
Query: 608 NAMA 611
N M
Sbjct: 423 NKMC 426
>gi|449451631|ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Cucumis sativus]
Length = 528
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 200/458 (43%), Gaps = 59/458 (12%)
Query: 152 RSEAEA-IRVLVDRLSEREMTAKNW-KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQA 209
RSEAE +R ++ S++E K K+VR+M TE L L + LG + W +
Sbjct: 58 RSEAEELVRGIIRNFSDKEPLLKTLDKYVRVMR------TEHCFL-LFEELGKRDKWLEC 110
Query: 210 MSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS 269
+ V W+ K + + VY+KL++I+GK G+ A+ +F+ M + PD + Y++
Sbjct: 111 LEVFRWMQ--KQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEM-RNSGCRPDTSVYNA 167
Query: 270 -VAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
+ L K LVK++ +++K M R +P++V YN + A +
Sbjct: 168 LITAHLHSKDKAKALVKVLSYF-----EKMKGMER------CKPNIVTYNILTRAFAQAA 216
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ V +FK L +S + TY M++Y + G I E + M+
Sbjct: 217 KVDQVNTLFKDLDESVVSADIYTYNGVMDAYGK------------NGNIKEMELMLARMK 264
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEITFTGLIISSMDGG 446
+ + L + + G+ Q + + KSL SK P TF +I +
Sbjct: 265 SNQIKPDIISFNLL---IDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKAR 321
Query: 447 HIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
+ +F+ MKD +P+ T +++ +Y D SKA+E+F+ NS +S
Sbjct: 322 LREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGM--VNSGKEVRVST 379
Query: 506 DGAPLKPDEYTYSSM-LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
A L D Y + + LEA + +++ D T + L ++A K
Sbjct: 380 LNAML--DVYCINGLPLEA----------DLLFESAGNMRVFPDSTTYKLLYKAYTKADK 427
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
LLE ++ +AG IP+ FF + L + S+ EK
Sbjct: 428 KELLEKLLKNMDKAGIIPNKRFFLDAL--GTIGSSQEK 463
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 164/424 (38%), Gaps = 54/424 (12%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+L+ L + GRP +A R+ +E C A Y ++ + GLL++ +++ M
Sbjct: 101 RLVRDLCRRGRPADAARV----VEACGPEATAATYGALVDGYCRAGLLEDARRVVGGMPA 156
Query: 293 KPSKRIKNMHRKNWDPVLE--------------------PDLVVYNAVLNACVPSHQWKG 332
H + E PD+V YN +L A ++
Sbjct: 157 HVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQ 216
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+ +R G +P+ TY V++ A EG +++A + ++ RG
Sbjct: 217 ALELIDFMRAEGCEPNNVTY------------NVIIDAMCREGDVDQARELLNSLPSRGC 264
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 452
Y + C+ RW DA +++++ + P E T +I + G +
Sbjct: 265 KPNTVNYNTVLKGFCSIERWVDADEILDEMVR-ENCPPNEATLNVIINTLCRKGLLQKVT 323
Query: 453 SIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 511
+ M H C N+ T NA++ A EL + S G K
Sbjct: 324 LYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELL---SNMQSFG----------CK 370
Query: 512 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
PD TY+++L+ +A +WE E + M+ + D + ++ + G
Sbjct: 371 PDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEV 430
Query: 572 FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES--N 629
F + E G P+ ++ ++ E+A+ L+N MA F+ T++ + L ES
Sbjct: 431 FKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFN-TDKMYRVLTESLNK 489
Query: 630 EDRI 633
ED+I
Sbjct: 490 EDKI 493
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 122/321 (38%), Gaps = 46/321 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM- 254
L+ L ++G A+ VLD + D+ Y LL K +AL + + M
Sbjct: 169 LIHALCERGRVADALVVLDGMLCRGCAPDV---VTYNILLQAACKGRGYRQALELIDFMR 225
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E C P+ Y+ + + + G + + +L+ + PS+ K P+
Sbjct: 226 AEGCE--PNNVTYNVIIDAMCREGDVDQARELLNSL---PSRGCK------------PNT 268
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR------------- 361
V YN VL +W + ++ + P+ AT + + + R
Sbjct: 269 VNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEK 328
Query: 362 -----CLLKV-----LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
C V ++ E+G ++ A+ + NM+ G Y + LC+ R
Sbjct: 329 MSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADR 388
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
W+DA ++ K+ S P TF +I G I +F+ M + C PN T +
Sbjct: 389 WEDAEELMIKM-SQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYS 447
Query: 471 AMLKVYSRNDMFSKAKELFEE 491
++ ++ +A EL E
Sbjct: 448 TIIGGLTKAGKMEQALELLNE 468
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 92/258 (35%), Gaps = 78/258 (30%)
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR--------IKNM-HRKNWDPV 309
N P+ A + + TL + GLL+++ +E+M + I M + N D
Sbjct: 298 NCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSA 357
Query: 310 LE-----------PDLVVYNAVLNACVPSHQW---------------------------- 330
LE PD+V YN VL + +W
Sbjct: 358 LELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISF 417
Query: 331 ---KGV----FWVFKQLRKSGLKPSAATYGLAMESYRRC--------------------- 362
KG+ F VFKQ+ + G P++ TY + +
Sbjct: 418 WCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTD 477
Query: 363 -LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
+ +VL + +E KI E V V ++ G+ +Y + LC NG+ A+ V+
Sbjct: 478 KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLAD 537
Query: 422 IKSLRHSKPLEITFTGLI 439
+ S P E T+ LI
Sbjct: 538 MVSC-GCMPDESTYIILI 554
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 82/416 (19%), Positives = 163/416 (39%), Gaps = 90/416 (21%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+E+ ++PD+ Y+++ + GLL+E +L++ M K L+P +
Sbjct: 384 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG---------------LKPCV 428
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG-LAMESYRR------------ 361
YNA++N + ++ V ++ K G+ P ATY L +E R
Sbjct: 429 FTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDE 488
Query: 362 ----------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
L+ + G +++A+ R+M+ G+ +Y L C NG
Sbjct: 489 MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 548
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTV 469
+A+ V +++ L L++ I++ + + + +F M + P+ T
Sbjct: 549 MSEALKVRDEM--LEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 606
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
++ Y ++ +KA LFE + N LKPD TY+++++ +
Sbjct: 607 TTLINGYXKDGNMNKAVTLFEMMIQRN-------------LKPDVVTYNTLIDGFCKGSE 653
Query: 530 WE--------------YFEYVYKGMALSG-CQLDQTKHAWLL--------VEAS------ 560
E Y ++ G+ ++G C + A+ L EA+
Sbjct: 654 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 713
Query: 561 ------RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
RAG + ++L G +P + + ++ I + N ++A AL+N M
Sbjct: 714 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 769
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 160/435 (36%), Gaps = 63/435 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL G + +A VLD + + D + Y LL + +A RIF+ M
Sbjct: 434 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT---YNILLVECCRNDNMMDAERIFDEMP 490
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNW------ 306
+ PD+ ++ ++ L + G L + +K M+ P I + +
Sbjct: 491 SQ-GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 549
Query: 307 -------DPVLEP----DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
D +LE D+V YN +LN +F ++ + G+ P T+
Sbjct: 550 SEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF--- 606
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+ + ++G +N+AV M QR + Y L C
Sbjct: 607 ---------TTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE---- 653
Query: 416 MLVVEKIKSL------RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGT 468
+EK+ L R P I++ LI + G + + ++ M + E I T
Sbjct: 654 ---MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 710
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
N ++K Y R KA E L G + PD TY++++
Sbjct: 711 CNTIVKGYCRAGNAVKADEFLSNM---------LLKG----IVPDGITYNTLINGFIKEE 757
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ + M SG D + +L SR G+ E ++E G P +T
Sbjct: 758 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 817
Query: 589 EMLIQAIVQSNYEKA 603
++ + Q+N ++A
Sbjct: 818 SLINGHVTQNNLKEA 832
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 112/302 (37%), Gaps = 27/302 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++ ++ N ++NA + + + + + G+ P TY L+
Sbjct: 354 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTY------------NTLIN 401
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
A+ +G + EA + +M +G+ Y + LC G++ A V++++ + S
Sbjct: 402 AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS- 460
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+ L++ ++ D IF M P++ + +A++ + S+N +A +
Sbjct: 461 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 520
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F + A L PD Y+ ++ V M GC LD
Sbjct: 521 FRDMKNAG-------------LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLD 567
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+ +L + + F + E G P FT ++ N KAV L
Sbjct: 568 VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFE 627
Query: 609 AM 610
M
Sbjct: 628 MM 629
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 111/263 (42%), Gaps = 23/263 (8%)
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRC-----LLKVLVRAFWEEGKINEAVAAVRNMEQR 390
+ + +RKSG+ L + +Y C + +LVR + + K+ E A R ++ +
Sbjct: 259 ILRMVRKSGVSRVEIVESLVL-TYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSK 317
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHID 449
G+ + + L L G W D + + + +R + + ++I+++ I+
Sbjct: 318 GLCVSINACNSLLGGLVKVG-WVDLAWEIYQ-EVVRSGVQVNVYTLNIMINALCKNQKIE 375
Query: 450 DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
+ S M++ P++ T N ++ Y R + +A EL + +SG G
Sbjct: 376 NTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDS-----------MSGKG- 423
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
LKP +TY++++ ++ + V M G D + LLVE R
Sbjct: 424 -LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDA 482
Query: 569 EHAFDSLLEAGEIPHPLFFTEML 591
E FD + G +P + F+ ++
Sbjct: 483 ERIFDEMPSQGVVPDLVSFSALI 505
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 103/267 (38%), Gaps = 46/267 (17%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ L + +M ++ + M + G+ L+ G G+ +A+++ + +
Sbjct: 574 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMI--- 630
Query: 221 DKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+R+LK V Y L+ K + ++N M+ +YP+ +Y + +G
Sbjct: 631 -QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR-RIYPNHISYGILINGYCNMGC 688
Query: 280 LKELVKLIERMRQK------------------------PSKRIKNMHRKNWDPVLEPDLV 315
+ E +L + M +K + + NM K + PD +
Sbjct: 689 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG----IVPDGI 744
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN ++N + F + ++ SGL P TY V++ F +G
Sbjct: 745 TYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITY------------NVILNGFSRQG 792
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYEL 402
++ EA + M +RGV S Y L
Sbjct: 793 RMQEAELIMLKMIERGVNPDRSTYTSL 819
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 117/261 (44%), Gaps = 33/261 (12%)
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM--RQKPSK 296
+A + EA+ FN+M E + P++AA++S+ L + +++ ++ ++M R P
Sbjct: 148 ARAQKFDEAVYTFNIM-EKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNGRFNPDA 206
Query: 297 RIKNMHRKNW-----------------DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ ++ + W D +PD+V Y ++++ + + + V +
Sbjct: 207 KTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQD 266
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ G +P+ Y VLV + E +I +AVA +ME+ G+V VY
Sbjct: 267 MSSRGCQPTTFIYS------------VLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVY 314
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
L C ++++A V++ ++ P T+ ++ + G D+ +F+ M
Sbjct: 315 NALVTAFCKVKKFENAFRVMDDMEG-HGIAPNSRTWNIILNKLISLGKDDEAYRVFRRMI 373
Query: 460 DHCEPNIGTVNAMLKVYSRND 480
C+P+ T M+K++ ND
Sbjct: 374 KRCQPDSDTYTMMIKMFCEND 394
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 126/323 (39%), Gaps = 82/323 (25%)
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILG 239
IM + G++ LL L + R+A + D + G + D K+ Y+ LL G
Sbjct: 162 IMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNG-RFNPDAKT---YSILLEGWG 217
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSK 296
KA + +++ ML D PDI Y + +L + G ++E V +++ M + P+
Sbjct: 218 KAPNLPKMREVYSEML-DAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTT 276
Query: 297 RIKNMHRKNW-------DPV----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
I ++ + D V + PD+VVYNA++ A +++ F V
Sbjct: 277 FIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDD 336
Query: 340 LRKSGLKPSAATYGLAM----------ESYR-------RC-------------------- 362
+ G+ P++ T+ + + E+YR RC
Sbjct: 337 MEGHGIAPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRCQPDSDTYTMMIKMFCENDNV 396
Query: 363 --------------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
VL+ ++G++++A + +M ++G+ S + +L
Sbjct: 397 EMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKL 456
Query: 403 ACCLCNNGRWQDAMLVVEKIKSL 425
L GR +V+K+K L
Sbjct: 457 RQLLLKEGRKDVLEFLVDKMKIL 479
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 84/223 (37%), Gaps = 19/223 (8%)
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
R ++ G T Y+ + L ++Q L+ + + +R + + G+I+
Sbjct: 92 RKQKRGGCNHTIRSYHTVVASLAKIRQYQ---LMWDVVAIMRREGVVNVETFGIIMRKYA 148
Query: 445 GGH-IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
D+ + F M+ + PN+ N++L ++ KA+E+F++
Sbjct: 149 RAQKFDEAVYTFNIMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMN--------- 199
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
PD TYS +LE A VY M +GCQ D + ++ +
Sbjct: 200 -----GRFNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKT 254
Query: 563 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
G+ + G P ++ ++ V+ E AVA
Sbjct: 255 GRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVA 297
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 144/352 (40%), Gaps = 46/352 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M G+ T L+ G G W +A + + + + ++ + + L+ +L K
Sbjct: 268 MKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVT---FNVLIDVLCK 324
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G+ EA + +M++ + P++ Y+S+ VG L +L M PSK
Sbjct: 325 EGKVIEAKDLLEVMIQR-GIVPNLLTYNSLIEGFCLVGDLNSARELFVSM---PSKGC-- 378
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
EPD++ Y ++N + + + ++ + + G +P TYG
Sbjct: 379 ----------EPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYG------- 421
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
L+ ++ GK+ +A M+ G+ G +Y LC NG +AM +
Sbjct: 422 -----ALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFN 476
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 479
K+KS +E F LI G ++ +F+ + ++ +P++ T N M+ + R
Sbjct: 477 KLKSYNIKLDIE-CFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRG 535
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
KA LF++ + + PD+ TY++++ + + E
Sbjct: 536 GQVVKANILFQKMEKNGCT-------------PDKITYATLIRGFFESKKLE 574
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 117/272 (43%), Gaps = 21/272 (7%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+V Y ++ H+ +F +++K G P+A TYG M+ R +
Sbjct: 164 PDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKL 223
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+E +N+ +++ + + VV + S+ + LC + R +A + E++K ++ P
Sbjct: 224 HQE-MLND--SSLYGINFKPVVISYSIIID---ALCKDRREDEARDLFEEMK-VQGMTPT 276
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
I++T LI GG ++ +F M + +PN+ T N ++ V + +AK+L E
Sbjct: 277 VISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLE 336
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ + P+ TY+S++E ++ M GC+ D
Sbjct: 337 VMIQRG-------------IVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVI 383
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ L+ + K ++ +L+ G+ P
Sbjct: 384 CYTVLINGYCKTSKVEEAMKLYNGMLQVGKRP 415
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/287 (18%), Positives = 115/287 (40%), Gaps = 33/287 (11%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P L + +L+ + VF+++ Q+R SG+ P C L +L+
Sbjct: 94 PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDC------------CTLNILLNCL 141
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
++ E +A + + +RG + Y L LC R A L+ +++ L P
Sbjct: 142 CNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLG-CTPN 200
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKD-------HCEPNIGTVNAMLKVYSRNDMFSK 484
IT+ L+ G+I + + Q M + + +P + + + ++ ++ +
Sbjct: 201 AITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDE 260
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A++LFEE + P +Y+S++ +WE + ++ M G
Sbjct: 261 ARDLFEEMKVQG-------------MTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQG 307
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
Q + L+ + GK + + +++ G +P+ L + ++
Sbjct: 308 VQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 354
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 103/249 (41%), Gaps = 37/249 (14%)
Query: 147 PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDK 203
P K + VL++ + + K M Q G + T G +L L G
Sbjct: 374 PSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKV 433
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G ++ V+ VYG+ DL ++Y L L K G EA+ +FN L+ N+ D
Sbjct: 434 GDAKKLFGVMK-VYGIPG--DL---YIYGIFLNGLCKNGCLFEAMELFN-KLKSYNIKLD 486
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
I ++ + L + G L+ +L E++ Q+ L+PD+V YN +++
Sbjct: 487 IECFNCLIDGLCKAGKLETAWELFEKLPQEE---------------LQPDVVTYNIMIHE 531
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
Q +F+++ K+G P TY L+R F+E K+ + V
Sbjct: 532 FCRGGQVVKANILFQKMEKNGCTPDKITYA------------TLIRGFFESKKLEKVVEL 579
Query: 384 VRNMEQRGV 392
+ M QR V
Sbjct: 580 LHMMVQRDV 588
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 123/302 (40%), Gaps = 27/302 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
EPD+V + +++N ++ + + Q+ + G+KP Y ++
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMY------------TTIID 185
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+ + G +N A++ ME G+ +Y L LCN+GRW+DA ++ + R K
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK-RKIK 244
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P ITF LI + + G D ++ M + PNI T +++ + +A+++
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F + G PD Y+S++ + + ++ M+ G +
Sbjct: 305 F-----------YLMETKGC--FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+ L+ + GK ++ + F ++ G P+ + +L +KA+ +
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 609 AM 610
M
Sbjct: 412 DM 413
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 150/385 (38%), Gaps = 51/385 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ R EA+ + N M+E + PD+ Y ++ +L + G + + L ++M
Sbjct: 145 FTSLINGFCLGNRMEEAMSMVNQMVE-MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM 203
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+N+ + PD+V+Y +++N S +W+ + + + K +KP
Sbjct: 204 -------------ENYG--IRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 351 TYGLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNM 387
T+ ++++ + L+ F EG ++EA M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
E +G Y L C + DAM + ++ S + IT+T LI G
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM-SQKGLTGNTITYTTLIQGFGQVGK 367
Query: 448 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
+ +F HM PNI T N +L N KA +FE+ + G
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG------- 420
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
+ P+ +TY+ +L + E V++ M + + ++ +AGK
Sbjct: 421 ---VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEML 591
+ F SL G P+ + +T M+
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTMI 502
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 128/350 (36%), Gaps = 85/350 (24%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL + G WR A S+L + K K D+ + + L+ K G+ +A ++N M+
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT---FNALIDAFVKEGKFLDAEELYNEMI 274
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ P+I Y S+ G + E ++ M K PD+V
Sbjct: 275 R-MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC---------------FPDVV 318
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y +++N + +F ++ + GL + TY L++ F + G
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY------------TTLIQGFGQVG 366
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
K N A +M RGV Y L CLC NG+ + A+++ E ++
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK----------- 415
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE---- 491
MDG PNI T N +L N KA +FE+
Sbjct: 416 -----REMDG----------------VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Query: 492 ------------------TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+ ++ F S +KP+ TY++M+
Sbjct: 455 EMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 130/304 (42%), Gaps = 31/304 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L P+ V Y A+++ Q + F +F+++R+ G++P+ TY CL+ R
Sbjct: 69 LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTY--------NCLIGEWCR 120
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
G+ A + M RG+V Y L LC +G+ DA +++ +++ ++
Sbjct: 121 T----GEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRT-EGTR 175
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSR-NDMFSKAKE 487
P ITF L+ G + + + F MK +P+ T N ++ + R DM +
Sbjct: 176 PSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRA 235
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA-HQWEYFEYVYKGMALSGCQ 546
L + R L+P + TY+ ++++ A H + FE + GM +G +
Sbjct: 236 LSDMKERG--------------LEPTKVTYTILIDSFARENHMGKAFE-ILAGMEKAGLE 280
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
+D + L+ G F S+ E G P + + M+ + + KA+ L
Sbjct: 281 VDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKL 340
Query: 607 INAM 610
I M
Sbjct: 341 IMEM 344
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 103/256 (40%), Gaps = 46/256 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G A +LD ++ + S + L+ GKAG+ AL FN M
Sbjct: 149 LIAGLCRHGKLWDAAKLLDM---MRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQM- 204
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ--KPSKRIKNMHRKNWDPVLEPD 313
A + AVT L+ R R + ++ + +M + LEP
Sbjct: 205 -------KAAGFQPSAVTYNM------LIAGFCRARDMTRANRALSDMKERG----LEPT 247
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG-----LAMESYRR------- 361
V Y ++++ + F + + K+GL+ A TYG L ME +
Sbjct: 248 KVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQ 307
Query: 362 -----------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+ +++ + EG +A+ + M Q+G++ ++ Y LC +
Sbjct: 308 SMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDD 367
Query: 411 RWQDAMLVVEKIKSLR 426
+ Q+A +++ ++++R
Sbjct: 368 KCQEAEALLDDMETIR 383
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 170/450 (37%), Gaps = 69/450 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ GL G A+ ++D + G + + Y +L ++ K+G+ A+ +
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQ-----PNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M E+ N+ D Y + L + G L L M K K D
Sbjct: 254 M-EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK---------------AD 297
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
++ YN ++ + +W + + + K + P+ T+ VL+ +F +
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF------------SVLIDSFVK 345
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
EGK+ EA ++ M QRG+ Y L C R ++A+ +V+ + S + P +
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS-KGCDPDIM 404
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
TF LI IDD + +F+ M N T N +++ + ++ AK+LF+E
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 493 ----TRANSSGYTFLSGDG-------------------APLKPDEYTYS----SMLEASA 525
R + Y L DG + ++ D Y M AS
Sbjct: 465 VSRRVRPDIVSYKILL-DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASK 523
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
W+ F + L G +LD + ++ E R + F + E G P L
Sbjct: 524 VDDAWDLF----CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDEL 579
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
+ ++ + + A LI M + F
Sbjct: 580 TYNILIRAHLGDDDATTAAELIEEMKSSGF 609
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/379 (20%), Positives = 151/379 (39%), Gaps = 45/379 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
++ LL L R EAL + + M+E + P + +++ L G + + V LI+R
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGH-KPTLITLNTLVNGLCLNGKVSDAVVLIDR 218
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + +P+ V Y VLN S Q + +++ + +K A
Sbjct: 219 MVETG---------------FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
Y +++ ++G ++ A ME +G Y L CN
Sbjct: 264 VKY------------SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 410 GRWQD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 467
GRW D A L+ + IK R P +TF+ LI S + G + + + + M PN
Sbjct: 312 GRWDDGAKLLRDMIK--RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T N+++ + + + +A ++ + + G PD T++ ++ A
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVD-----------LMISKGC--DPDIMTFNILINGYCKA 416
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
++ + +++ M+L G + + L+ ++GK + + F ++ P + +
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 588 TEMLIQAIVQSNYEKAVAL 606
+L EKA+ +
Sbjct: 477 KILLDGLCDNGELEKALEI 495
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/323 (16%), Positives = 128/323 (39%), Gaps = 38/323 (11%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC--------- 362
P ++ +N + +A + Q++ V + KQ+ G+ S T + + + RC
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 363 --------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
+ L+ E +++EA+ V M + G T L LC
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 467
NG+ DA+++++++ +P E+T+ ++ G + + + M++ + + +
Sbjct: 206 NGKVSDAVVLIDRMVETGF-QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
+ ++ ++ A LF E G+ K D TY++++ A
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEM---EIKGF----------KADIITYNTLIGGFCNA 311
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
+W+ + + M + + L+ + GK + +++ G P+ + +
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 588 TEMLIQAIVQSNYEKAVALINAM 610
++ ++ E+A+ +++ M
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLM 394
>gi|357166198|ref|XP_003580632.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Brachypodium distachyon]
Length = 644
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 140/342 (40%), Gaps = 61/342 (17%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
SR Y LL L AG A+ +F+ M + + PD+ +Y+ + + G ++ +
Sbjct: 207 SRVTYNCLLDGLANAGLLDTAINVFDAMSTEDRVRPDVVSYNILIKGYCRAGRAQDAMAR 266
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ MR++ L PD V Y ++ + +F+++ + G+
Sbjct: 267 LAHMREQAE--------------LSPDKVTYLTLMQLHYSEGTFSQCIRLFQEMEEMGMG 312
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
+ + ++ A +EGK E +A M + G A++Y L +
Sbjct: 313 KDIPQHAYVL----------VIGALCKEGKPFEGLAVFERMLKSGYPAKAAMYTALIDTM 362
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD------ 460
GR +AML+ E++K+ +GL + ++ G I +C+ F + +
Sbjct: 363 GKFGRENEAMLLFERMKA-----------SGLELDAITYGVIVNCLCRFGKLDEAILCFR 411
Query: 461 HCEPNIGTVNAMLKV-----YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
+C VNA+ + + M +A+ELFEE G+ PD Y
Sbjct: 412 NCVEKGIAVNAIFYTSLIDGFGKAGMVDQAQELFEEM---KVKGFV----------PDSY 458
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 557
Y+ +++ A A + + +YK M GC DQT + + ++
Sbjct: 459 CYNVLIDGLAKAGRLDDACALYKRMEDDGC--DQTVYTYTII 498
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 100/260 (38%), Gaps = 23/260 (8%)
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+ W + +R +G++PS TY CLL L A G ++ A+ M
Sbjct: 192 LLWAWSAMRLAGVEPSRVTY--------NCLLDGLANA----GLLDTAINVFDAMSTEDR 239
Query: 393 VGTASVYYELAC-CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
V V Y + C GR QDAM + ++ P ++T+ L+ G C
Sbjct: 240 VRPDVVSYNILIKGYCRAGRAQDAMARLAHMREQAELSPDKVTYLTLMQLHYSEGTFSQC 299
Query: 452 ISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 511
I +FQ M++ +A + V K E R SGY P K
Sbjct: 300 IRLFQEMEEMGMGKDIPQHAYVLVIGALCKEGKPFEGLAVFERMLKSGY--------PAK 351
Query: 512 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
YT ++++ + +++ M SG +LD + ++ R GK
Sbjct: 352 AAMYT--ALIDTMGKFGRENEAMLLFERMKASGLELDAITYGVIVNCLCRFGKLDEAILC 409
Query: 572 FDSLLEAGEIPHPLFFTEML 591
F + +E G + +F+T ++
Sbjct: 410 FRNCVEKGIAVNAIFYTSLI 429
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 138/358 (38%), Gaps = 44/358 (12%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+E L P + Y ++ LG+ G L+++ L+ MR++ L P++
Sbjct: 320 MEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRER---------------RLPPNV 364
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+YN+V++A V KQ+ G P A T+ L+ +E
Sbjct: 365 QIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITF------------STLISGLCQE 412
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEI 433
G++ EA +R + + S Y L C G A L+VE ++ R P +
Sbjct: 413 GRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMME--RGHTPDVV 470
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
TF LI + G + + + + + M P+ N ++ + M A+ L EE
Sbjct: 471 TFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEM 530
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
N + PD+Y Y+++++ + +++ M G D +
Sbjct: 531 LEQN-------------VHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGY 577
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
++ + G + ++ + G IP +T ++ Q N A++L+ M
Sbjct: 578 NAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDM 635
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 103/468 (22%), Positives = 178/468 (38%), Gaps = 89/468 (19%)
Query: 148 EKRWRS----EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDK 203
E RW + A VL+D R + + M GL+ T L+ LG K
Sbjct: 283 EARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRK 342
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYP 262
G + S+L ++++R + +Y ++ L K +AL + M C+ P
Sbjct: 343 GDLEKIASLLSE---MRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCD--P 397
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE----------- 311
D + ++ L Q G ++E ER+ ++ ++ N + ++ ++
Sbjct: 398 DAITFSTLISGLCQEGRVQE----AERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVA 453
Query: 312 -------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-----G 353
PD+V + A+++ V + Q V +++ L P A Y G
Sbjct: 454 SNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISG 513
Query: 354 LA---MESYRRCLLK---------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
L M R L++ L+ F ++EA MEQ+G+
Sbjct: 514 LCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPD 573
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEITFTGLIISSMDGGHIDDCIS 453
Y + C G +A VE + ++R P E T+T LI G+I +S
Sbjct: 574 VVGYNAMIKGYCQFGMMNEA---VECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALS 630
Query: 454 IF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF----EETTRANSSGYTFLSGDGA 508
+ MK C+PN+ ++++ Y + A+ LF + N YT L G+
Sbjct: 631 LLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILI--GS 688
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL-DQTKHAWL 555
K D+ ++M YFEY M L+ C D T H+ +
Sbjct: 689 LFKKDKVVRAAM-----------YFEY----MLLNQCSPNDYTLHSLV 721
>gi|357112338|ref|XP_003557966.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 538
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 144/349 (41%), Gaps = 48/349 (13%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSG-LKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN +L+A + +F+ L +G + P A ++ +A V+ F +G
Sbjct: 125 YNDILSALARGGDYDSAMALFRALEPNGTVAPDAHSFAIA------------VQCFCRKG 172
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+EA + M RG + T S + + CLC GR AM V++ ++ + +P T+
Sbjct: 173 APDEAKETLDEMLARGYLPTVSAFSAVVGCLCKRGRVTRAMEVLDAMRGV-GCEPTIRTY 231
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
LI G ++D + +KD + +I T +L + + A +FE+
Sbjct: 232 NSLIGGLCYVGRLEDARDLLNKLKDSPKQTADIYTFTIVLDGFCKVGRTDDAMAIFEDAV 291
Query: 494 RANSSGYTF-----LSG------------------DGAPLKPDEYTYS----SMLEASAT 526
R S F L+G D PD+ ++S ++L A
Sbjct: 292 RTGLSPTIFTYNALLNGHCKEGHLLKAYNLLMEMCDNETCPPDKISFSIVLPALLRAGEI 351
Query: 527 AHQWEYFEYV-YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+ W+ F+ + + G+ G LD A+ + F L+ +G P+
Sbjct: 352 SAAWQTFKRMEHAGLEADGRALDTLTRGLCRQCAADISALRDAKEVFGKLVSSGH--EPV 409
Query: 586 FFTEMLI-QAIVQSN-YEKAVALINAMAYAPFHITERQWTELFESNEDR 632
+T L+ QA+ + + AVA+++ MA + + +R +T++ + DR
Sbjct: 410 SYTYCLMAQALARGGEVDAAVAILDDMARKGYALRKRAYTDVVRALCDR 458
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 107/285 (37%), Gaps = 48/285 (16%)
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
KG+ +A LD + + L + ++ ++ L K GR A+ + + M P
Sbjct: 171 KGAPDEAKETLDEMLA---RGYLPTVSAFSAVVGCLCKRGRVTRAMEVLDAM-RGVGCEP 226
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
I Y+S+ L VG L++ L+ +++ P + D+ + VL+
Sbjct: 227 TIRTYNSLIGGLCYVGRLEDARDLLNKLKDSPKQ--------------TADIYTFTIVLD 272
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATY----------GLAMESYRRCL--------- 363
+ +F+ ++GL P+ TY G +++Y +
Sbjct: 273 GFCKVGRTDDAMAIFEDAVRTGLSPTIFTYNALLNGHCKEGHLLKAYNLLMEMCDNETCP 332
Query: 364 -----LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN-----GRWQ 413
+++ A G+I+ A + ME G+ L LC +
Sbjct: 333 PDKISFSIVLPALLRAGEISAAWQTFKRMEHAGLEADGRALDTLTRGLCRQCAADISALR 392
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
DA V K+ S H +P+ T+ + + GG +D ++I M
Sbjct: 393 DAKEVFGKLVSSGH-EPVSYTYCLMAQALARGGEVDAAVAILDDM 436
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 142/362 (39%), Gaps = 46/362 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G QA S+ D+ + YT ++ L K + EA+ + +
Sbjct: 5 LINGLVKAGMLIQAHSLAQETTTNGCTIDIHT---YTTIVDWLAKNKKIQEAVALMEKIT 61
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P IA Y+++ L ++G L+E + L+ RK D PD+V
Sbjct: 62 AN-GCTPTIATYNALLNGLCKMGRLEEAIDLL---------------RKIVDNGCTPDVV 105
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y ++++ + + +FK++ GL Y L+R + G
Sbjct: 106 TYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCY------------TALIRGLLQAG 153
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
KI +A + + M +G V + LC GR A+ + + +++ R P E+ +
Sbjct: 154 KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEA-RGLAPNEVVY 212
Query: 436 TGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
+ LI +D + + MK C P+ T N ++ ++ + A+ F+E
Sbjct: 213 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLE 272
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
A KPD YTY+ ++ A + V+ M+ S C + +
Sbjct: 273 AGC-------------KPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGT 319
Query: 555 LL 556
L+
Sbjct: 320 LI 321
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 149/381 (39%), Gaps = 44/381 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y LL L K GR EA+ + ++++ PD+ Y S+ LG+ E KL + M
Sbjct: 72 YNALLNGLCKMGRLEEAIDLLRKIVDN-GCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEM 130
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ L D V Y A++ + + + V+K + G P
Sbjct: 131 ASRG---------------LALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVV 175
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
T L ++ + G+I AV ++ME RG+ VY L LC
Sbjct: 176 T------------LSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 223
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTV 469
+ A+ ++ ++K P IT+ LI G + + F M + C+P++ T
Sbjct: 224 KMDCALEMLAQMKK-AFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTY 282
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
N ++ + + A +F++ + + S P+ TY +++ Q
Sbjct: 283 NILISGFCKAGNTDAACGVFDDMSSSRCS-------------PNVVTYGTLISGLCKRRQ 329
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
Y+ M GC D ++ L+ ++GK FD + +G + + T
Sbjct: 330 LTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG-VANSQTRTR 388
Query: 590 MLIQAIVQSNYEKAVALINAM 610
++ + ++AV+L NA+
Sbjct: 389 LIFHLCKANRVDEAVSLFNAI 409
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 146/351 (41%), Gaps = 38/351 (10%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L +++ + + +K + M GL L++GL G QA SV +
Sbjct: 110 LIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKT---MT 166
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ + + ++ L KAGR A+RIF M E L P+ Y ++ L + +
Sbjct: 167 SQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM-EARGLAPNEVVYSALIHGLCKARKM 225
Query: 281 KELVKLIERMRQ---KPSKRIKNM-------------HRKNWDPVLE----PDLVVYNAV 320
++++ +M++ P N+ R +D +LE PD+ YN +
Sbjct: 226 DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNIL 285
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA 380
++ + VF + S P+ TYG L+ + ++ +A
Sbjct: 286 ISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYG------------TLISGLCKRRQLTKA 333
Query: 381 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 440
++M++RG + VY L LC +G+ + ++ ++++ R T T LI
Sbjct: 334 SLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEME--RSGVANSQTRTRLIF 391
Query: 441 SSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+D+ +S+F ++ P+ N+++ ++ ++ + +++E
Sbjct: 392 HLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQE 442
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 89/478 (18%), Positives = 173/478 (36%), Gaps = 100/478 (20%)
Query: 139 FAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLK 198
+ V+W + + EA A L+++++ T + ++N M + + LL+
Sbjct: 37 YTTIVDWLAKNKKIQEAVA---LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 93
Query: 199 GLGDKGSWRQAMSVLDWVYGLKDKR----------DLKSR------FVYTKLLAILGKAG 242
+ D G ++ + GL K+ ++ SR YT L+ L +AG
Sbjct: 94 KIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAG 153
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
+ +A ++ M PD+ ++ L + G + V++ + M +
Sbjct: 154 KIPQASSVYKTMTSQ-GCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARG-------- 204
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
L P+ VVY+A+++ + + + Q++K+ P TY
Sbjct: 205 -------LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY---------- 247
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
+L+ + G + A A M + G
Sbjct: 248 --NILIDGLCKSGDVAAARAFFDEMLEAGC------------------------------ 275
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 481
KP T+ LI G+ D +F M C PN+ T ++ +
Sbjct: 276 ------KPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQ 329
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
+KA S Y + G P PD + YSS+++ + + E ++ M
Sbjct: 330 LTKA-----------SLYYQHMKERGCP--PDSFVYSSLVDGLCKSGKLEGGCMLFDEME 376
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
SG QT+ L+ +A + F+++ + G +PHP + +I A+++S
Sbjct: 377 RSGVANSQTR-TRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNS-IISALIKSG 431
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 121/301 (40%), Gaps = 29/301 (9%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
D+ Y +++ + + + + +++ +G P+ ATY L+
Sbjct: 33 DIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATY------------NALLNGLC 80
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
+ G++ EA+ +R + G Y L L R +A + +++ S R
Sbjct: 81 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMAS-RGLALDT 139
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+ +T LI + G I S+++ M C P++ T++ M+ D KA
Sbjct: 140 VCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI------DGLCKAG----- 188
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
R ++ F S + L P+E YS+++ A + + + M + C D
Sbjct: 189 --RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 246
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS-NYEKAVALINAM 610
+ L+ ++G FD +LEAG P ++ +LI ++ N + A + + M
Sbjct: 247 YNILIDGLCKSGDVAAARAFFDEMLEAGCKPD-VYTYNILISGFCKAGNTDAACGVFDDM 305
Query: 611 A 611
+
Sbjct: 306 S 306
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/319 (19%), Positives = 130/319 (40%), Gaps = 19/319 (5%)
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+L+ + G + +A + + G Y + L N + Q+A+ ++EKI +
Sbjct: 4 ILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITA- 62
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
P T+ L+ G +++ I + + + D+ C P++ T +++ + +
Sbjct: 63 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFE 122
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A +LF+E ++ G L D Y++++ A + VYK M G
Sbjct: 123 AYKLFKE-----------MASRGLAL--DTVCYTALIRGLLQAGKIPQASSVYKTMTSQG 169
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
C D + ++ +AG+ F S+ G P+ + ++ ++ + A+
Sbjct: 170 CVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 229
Query: 605 ALINAMAYA---PFHITERQWTE-LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNL 660
++ M A P IT + L +S + +R +++L A C + + I +S
Sbjct: 230 EMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGF 289
Query: 661 SRALHALCRSEKERDLSSS 679
+A + D+SSS
Sbjct: 290 CKAGNTDAACGVFDDMSSS 308
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 139/361 (38%), Gaps = 76/361 (21%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L K GR EA +IF+ M + L PDIA Y ++ G L E+ L++ M
Sbjct: 304 YNSLMDYLCKNGRSTEARKIFDSMTKR-GLEPDIATYCTLLQGYATKGALVEMHALLDLM 362
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + PD V+N ++ A + VF ++R+ GL P+
Sbjct: 363 VRNG---------------IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVV 407
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TYG ++ + G +++A+ M G+ VY L LC
Sbjct: 408 TYG------------AVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD 455
Query: 411 RWQDAM-LVVEKI-----------KSLRHS----------------------KPLEITFT 436
+W A L++E + S+ HS KP IT++
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYS 515
Query: 437 GLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
LI G +D+ + M +P+ T N ++ Y R A LF+E
Sbjct: 516 TLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMV-- 573
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
SSG + P+ TY+ +L+ + + +Y G+ SG QL+ + + +
Sbjct: 574 -SSG----------VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNII 622
Query: 556 L 556
L
Sbjct: 623 L 623
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/468 (19%), Positives = 184/468 (39%), Gaps = 50/468 (10%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R EA L+ L + T+ V R M + M LLKGL D+
Sbjct: 115 KKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRS 174
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++A+ +L + + YT ++ K G +A ++ ML D + PD+
Sbjct: 175 QEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEML-DRRISPDVVT 233
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y S+ L + + + ++++ M +KN + P+ + YN++L+
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTTM-------VKNG--------VMPNCMTYNSILHGYCS 278
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRN 386
S Q K K++R G++P TY M+ + G+ EA +
Sbjct: 279 SEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY------------LCKNGRSTEARKIFDS 326
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL---RHSKPLEITFTGLIISSM 443
M +RG+ + Y C L + A++ + + L P F LI +
Sbjct: 327 MTKRGLEPDIATY----CTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382
Query: 444 DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
+D+ + +F M+ H PN+ T A++ + ++ A FE+
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG------ 436
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
L P+ Y+S++ + +W+ E + M G L+ ++ +
Sbjct: 437 -------LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKE 489
Query: 563 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
G+ E FD ++ G P+ + ++ ++ + ++A L+++M
Sbjct: 490 GRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 154/381 (40%), Gaps = 58/381 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
V L+ +L K + +A +F+ ++ ++P + +Y+ + L ++ ++L E
Sbjct: 762 VMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFED 821
Query: 290 MR-----------------QKPSKRIK---NMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
M+ SKRI +++ + EP+ + +N +++A V S+
Sbjct: 822 MKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNN 881
Query: 330 WKGVFWVFKQLRKSGLKPSAATYG-------------LAMESYRRCL----------LKV 366
++ +L P+ TYG AM+ + L +
Sbjct: 882 LNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNI 941
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L+ F + G+I+ A + M + G+ Y L CLC GR +A+ E++K L
Sbjct: 942 LINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELK-LT 1000
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 485
P +++ +I +D+ +S+F MK+ P++ T NA++ A
Sbjct: 1001 GLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVA 1060
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+++EE L+P +TY++++ + + + V+K M + GC
Sbjct: 1061 VKMYEELQLVG-------------LEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGC 1107
Query: 546 QLDQTKHAWLLVEASRAGKCH 566
+ A L + RAG H
Sbjct: 1108 SPNTETFAQLPNKYPRAGLVH 1128
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 98/474 (20%), Positives = 185/474 (39%), Gaps = 76/474 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y L+ +L G +EAL+++ M+ + + P + Y ++ V LG+ G ++++ L+E
Sbjct: 202 YSYNGLIHLL-LPGFCNEALKVYKRMISE-GMKPSMKTYSALMVALGRRGDTRKIMNLLE 259
Query: 289 RMRQ---KP--------------SKRIKN---MHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M+ +P ++RI + + ++ D PD++ Y +++A +
Sbjct: 260 EMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAG 319
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE-------------- 374
+ ++ ++R S P TY M+ + + V+ FW E
Sbjct: 320 KLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYT 379
Query: 375 ---------GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
G ++ A + M +G+ Y + C L R +A+ ++E ++SL
Sbjct: 380 ILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESL 439
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
KP ++ I G I F+ MK P+I NA L + S+
Sbjct: 440 -GVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISE 498
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A+++F + + L PD TY+ +++ + A Q + + M G
Sbjct: 499 AEDIFNDLHKCG-------------LSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKG 545
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
C+ D L+ +AG+ F L P + + +L + KA+
Sbjct: 546 CEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKAL 605
Query: 605 ALINAMAYA---PFHITERQWTELFESNEDRISR-DKLEKLLNALC-----NCN 649
L +M + P IT F S D +S+ D ++ L C NCN
Sbjct: 606 ELFGSMTESGCPPNTIT-------FNSLLDCLSKNDAVDLALKMFCRMTMMNCN 652
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/398 (18%), Positives = 156/398 (39%), Gaps = 52/398 (13%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
LK+ + + Y LL LGK G+ +AL +F M E P+ ++S+ L +
Sbjct: 576 LKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTES-GCPPNTITFNSLLDCLSKND 634
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ +K+ RM M N PD++ YN ++ + + FW F
Sbjct: 635 AVDLALKMFCRM---------TMMNCN------PDVLTYNTIIYGLIREGRIDYAFWFFH 679
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
Q++K L P T L L+ G++ +A+ V + + T S
Sbjct: 680 QMKKF-LSPDYVT------------LCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQ 726
Query: 399 YY-ELACCLCNNGRWQDAMLVVEKI--KSLRHSKPLEITFTGLIIS---SMDGGHIDDCI 452
++ EL C+ ++A+ E + S+ + + ++ ++D ++ D
Sbjct: 727 FWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKF 786
Query: 453 SIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
+ +++ H P + + N ++ ++ KA ELFE+ A + P
Sbjct: 787 T--KNLGIH--PTLESYNCLMDGLLGSNFTEKALELFEDMKSAGT-------------HP 829
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
+ +TY+ +L+A + + +Y M GC+ + H ++ ++ + +
Sbjct: 830 NNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLY 889
Query: 573 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L+ P P + ++ + E+A+ + M
Sbjct: 890 YELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEM 927
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 107/267 (40%), Gaps = 30/267 (11%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
LD Y L + Y L+ L KAGR +A++IF ML D P+ Y+ +
Sbjct: 886 LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEML-DYGCGPNSVIYNILIN 944
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
G+ G + +L ++M ++ + PDL Y ++ + +
Sbjct: 945 GFGKSGEIDFACELFKKMVKEG---------------IRPDLKSYTILVECLCITGRIDE 989
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
F++L+ +GL P +Y ++ + +++EA++ M+ RG+
Sbjct: 990 AVQYFEELKLTGLDPDTVSYNF------------IINGLGKSRRLDEALSLFSEMKNRGI 1037
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 452
Y L L G+ A+ + E+++ L +P T+ LI G+ D
Sbjct: 1038 SPDLYTYNALILHLGIAGKVDVAVKMYEELQ-LVGLEPSVFTYNALIRGHSLSGNKDQAF 1096
Query: 453 SIFQHMK-DHCEPNIGTVNAMLKVYSR 478
S+F+ M C PN T + Y R
Sbjct: 1097 SVFKKMMVVGCSPNTETFAQLPNKYPR 1123
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 137/352 (38%), Gaps = 56/352 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT L+ K G A R+F+ M + + PD Y +V L Q G + E KL
Sbjct: 260 IYTTLIDGFCKLGNVSSAYRLFDEM-QKRKISPDFITYTAVICGLCQTGRVMEADKLFHE 318
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K LEPD V Y A+++ + K F + Q+ + GL P+
Sbjct: 319 MVCKR---------------LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNI 363
Query: 350 ATYGLAMESYRRC-----------------------LLKVLVRAFWEEGKINEAVAAVRN 386
TY + +C LV + G I++AV +++
Sbjct: 364 VTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKD 423
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
ME G A Y L C + A ++ ++ R +P +TF L+ G
Sbjct: 424 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD-RELQPTVVTFNVLMNGFCMSG 482
Query: 447 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYS-RNDMFSKAKELFEETTRANSSGYTFLS 504
++D + + M + PN T N+++K Y RN+M RA + Y +
Sbjct: 483 MLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM------------RATTEIYRGMC 530
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
G + PD TY+ +++ A + ++++ M G L + + L+
Sbjct: 531 AKG--VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALI 580
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 117/291 (40%), Gaps = 45/291 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT L+ K G+ EA + N ML+ L P+I Y ++A L + G + +L+
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQ-MGLTPNIVTYTALADGLCKCGEVDTANELLHE 388
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +K LE ++ YN+++N + + K + +G P A
Sbjct: 389 MCRKG---------------LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDA 433
Query: 350 ATYGLAMESY-------------RRCL----------LKVLVRAFWEEGKINEAVAAVRN 386
TY M++Y R+ L VL+ F G + + ++
Sbjct: 434 VTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKW 493
Query: 387 MEQRGVVGTASVYYELA--CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
M ++G++ A+ Y L C+ NN R A + + + P T+ LI
Sbjct: 494 MLEKGIMPNATTYNSLIKQYCIRNNMR---ATTEIYRGMCAKGVVPDGNTYNILIKGHCK 550
Query: 445 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
++ + + + M + + NA++K + + F +A+ELFE+ R
Sbjct: 551 ARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRR 601
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/360 (20%), Positives = 131/360 (36%), Gaps = 81/360 (22%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
L P+ Y+ V + L + G + E +++ M + + PD V+Y
Sbjct: 219 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEG---------------IAPDGVIYTT 263
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY----------GLAMES---YRRCLLK- 365
+++ + +F +++K + P TY G ME+ + + K
Sbjct: 264 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323
Query: 366 ---------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
L+ + +EGK+ EA + M Q G+ Y LA LC G A
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383
Query: 417 LVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLK 474
++ ++ R L I T+ L+ G+ID + + + M+ P+ T ++
Sbjct: 384 ELLHEM--CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMD 441
Query: 475 VYSRNDMFSKAKELFEE-----------TTRANSSGYTFLSG---DGAPL---------K 511
Y ++ +A EL + T +G+ +SG DG L
Sbjct: 442 AYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFC-MSGMLEDGEKLLKWMLEKGIM 500
Query: 512 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSG---------------CQLDQTKHAWLL 556
P+ TY+S+++ + +Y+GM G C+ K AW L
Sbjct: 501 PNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFL 560
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 85/420 (20%), Positives = 153/420 (36%), Gaps = 51/420 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
V ++LL L A R EA I L + + PD+ AY++V
Sbjct: 127 VISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGF--------------- 171
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
R+ ++ N+ + D + P++V Y V++ + VF+Q+ G+KP
Sbjct: 172 FREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDN 231
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L+ + GK E V + M G+ Y L LC N
Sbjct: 232 GTY------------NCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKN 279
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
GR ++A L + + + KP + L+ G + + S M + PN
Sbjct: 280 GRCREARLFFDSMFR-KGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRI 338
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG------------DGAPLK----- 511
N M Y++ M +A +F + + S G D A L+
Sbjct: 339 FNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMI 398
Query: 512 -----PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
P+ + +SS++ T +WE E ++ + G +D L+ G+
Sbjct: 399 NEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVM 458
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 626
+ D ++ G P+ + + ++ + ++A L++ M E +T L
Sbjct: 459 EAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILL 518
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 96/246 (39%), Gaps = 20/246 (8%)
Query: 362 CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
C +L+ F G++ AA + + G V +L LC+ R +A ++
Sbjct: 91 CTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLL 150
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 480
S P + + +I G ++ ++F M D PN+ T ++ +
Sbjct: 151 RMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQ 210
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
+ +AK +F++ +KPD TY+ ++ + +W+ + + M
Sbjct: 211 VVDRAKGVFQQMIDRG-------------VKPDNGTYNCLIHGYLSTGKWKEVVQMLEEM 257
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 600
+ G + D +A LL + G+C FDS+ G P ++ I AI+ Y
Sbjct: 258 STHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKP------DVAIYAILLHGY 311
Query: 601 EKAVAL 606
AL
Sbjct: 312 ATKGAL 317
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 132/340 (38%), Gaps = 58/340 (17%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG-------LLKEL 283
+ L+ L K GR +A+ FN M+ + + P+I + S+ L VG L E+
Sbjct: 374 FGALIDALCKLGRVDDAVLQFNQMINE-GVTPNIFVFSSLVYGLCTVGKWEKAEELFFEV 432
Query: 284 V----------------KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+ L R ++R+ ++ + + P+++ YN ++ +
Sbjct: 433 LDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVG---VRPNVISYNTLVAGHCLT 489
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ + + +GLKP+ TY +L+R + + ++++A + R M
Sbjct: 490 GRIDEAAKLLDVMVSNGLKPNEFTY------------TILLRGYCKARRVDDAYSLFREM 537
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
+GV + Y + L GR+ +A L + I S +K T+ ++
Sbjct: 538 LMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINS--RTKCDIYTYNIILNGLCKNN 595
Query: 447 HIDDCISIFQHMKDHCEPNIGTV--NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+D+ +F+ + +P + +V N M+ + A +LF A S Y
Sbjct: 596 FVDEAFKMFRRLCSK-DPQLDSVTFNIMIGALLKGGRKEDAMDLF-----ATISAYG--- 646
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
L PD TY + E F+ ++ M SG
Sbjct: 647 -----LVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSG 681
>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
Length = 649
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/383 (18%), Positives = 150/383 (39%), Gaps = 66/383 (17%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ Y ++ + G + + + L+ M + +P+ V YNA L
Sbjct: 258 PDVVIYSTLINGFSEQGHVDQALDLLNTM------------------LCKPNTVCYNAAL 299
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL----------------- 364
+ +W+ + + ++ + G P+ AT+ + + S + L
Sbjct: 300 KGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCE 359
Query: 365 ------KVLVRAFWEEGKINEAVAAVRNMEQR-GVVGTASVYYELACCLCNNGRWQDAML 417
+++ + E G++++A+ + +M + +G +V C RW DA
Sbjct: 360 PDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKG----FCRAERWHDASE 415
Query: 418 VVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 475
++ ++ R PL E+TF LI + G ++ +F+ M + C P+I T +++L
Sbjct: 416 LIAQM--FRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNG 473
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
+S + A +LF P KPD ++Y+++L+ A +WE
Sbjct: 474 FSEQGLVEVAIQLFRSM----------------PCKPDIFSYNAVLKGLCRAARWEDAGE 517
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
+ M C ++ L+ + G + + G P + ++
Sbjct: 518 LIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFS 577
Query: 596 VQSNYEKAVALINAMAYAPFHIT 618
Q + A+ L++ M+ P I+
Sbjct: 578 EQGRLDDALKLLSTMSCKPDAIS 600
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 141/337 (41%), Gaps = 56/337 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ L + GR +ALR+ N M+ PD +++V LK + ER
Sbjct: 365 YNIIINSLSERGRVDDALRLLNSMV----CKPDALGFNAV---------LKGFCR-AERW 410
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
S+ I M R + P++E + +N +++ + VF+Q+ + P
Sbjct: 411 HDA-SELIAQMFRDDC-PLIE---MTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIV 465
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY L+ F E+G + A+ R+M + + + Y + LC
Sbjct: 466 TY------------SSLLNGFSEQGLVEVAIQLFRSMPCKPDIFS---YNAVLKGLCRAA 510
Query: 411 RWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 468
RW+DA L+ E + + P E+TF LI S G +D I + + M ++ P+I T
Sbjct: 511 RWEDAGELIAEMVG--KDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFT 568
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
NA++ +S A +L + KPD +Y+S L+ A
Sbjct: 569 YNALINGFSEQGRLDDALKLLSTMS----------------CKPDAISYNSTLKGLCRAE 612
Query: 529 QWEYFEYVYKGMALSGCQLDQT--KHAWLLVEASRAG 563
+W+ E + M + C ++ K+A L+ +RAG
Sbjct: 613 RWQDAEELVAEMLRNKCTPNEVTFKYANHLLMPNRAG 649
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/331 (18%), Positives = 120/331 (36%), Gaps = 48/331 (14%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-------- 361
+ PD YN VL + +W+ + ++ ++ P+ T+ + S+ +
Sbjct: 186 VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 245
Query: 362 ---------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-C 405
+ L+ F E+G +++A+ + M + +V Y A
Sbjct: 246 QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM----LCKPNTVCYNAALKG 301
Query: 406 LCNNGRWQD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 463
LC RW+D L+ E ++ + P E TF+ LI S +D + + + M+ + CE
Sbjct: 302 LCIAERWEDIGELMAEMVR--KGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCE 359
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
P+ N ++ S A L KPD ++++L+
Sbjct: 360 PDTVNYNIIINSLSERGRVDDALRLLNSMV----------------CKPDALGFNAVLKG 403
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
A +W + M C L + L+ + G + F+ + P
Sbjct: 404 FCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPD 463
Query: 584 PLFFTEMLIQAIVQSNYEKAVALINAMAYAP 614
+ ++ +L Q E A+ L +M P
Sbjct: 464 IVTYSSLLNGFSEQGLVEVAIQLFRSMPCKP 494
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 100/269 (37%), Gaps = 36/269 (13%)
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPN 465
LC GR DA V++ +K+ + ++ L+ G + D + + N
Sbjct: 100 LCATGRLADAERVLDALKAAAAAD--AVSHNTLVAGYCRDGRLADAERVLGAARATGAAN 157
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T A++ Y R+ A L P+ PD YTY+++L+
Sbjct: 158 VVTYTALIDGYCRSGRLDDALRLIASM----------------PVAPDTYTYNTVLKGLC 201
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
A +WE E + M + C ++ A + + G D + G P +
Sbjct: 202 IAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVV 261
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMAYAP-----------FHITERQWTELFESNEDRIS 634
++ ++ Q + ++A+ L+N M P I ER W ++ E + +
Sbjct: 262 IYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAER-WEDIGELMAEMVR 320
Query: 635 RD------KLEKLLNALCNCNAASSEITV 657
+ L+++LC N S + V
Sbjct: 321 KGCSPNEATFSMLISSLCQNNLVDSAVEV 349
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 152/384 (39%), Gaps = 54/384 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
V ++A G++ R H+ + F L+ P+ Y V +L + G + + ++
Sbjct: 15 LVSNAVIAAYGRSSRIHKVMDEFQ-ELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMDFLD 73
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M + LEPD ++YN VL+ ++ +F ++ G
Sbjct: 74 KMIKTG---------------LEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPAD 118
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY + + S RC + EA ME+RG +A Y + C
Sbjct: 119 DYTYAILIRSLGRC------------KRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCK 166
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
GR + AM+V++K+ ++ P + T LI + G + IF+ M K N
Sbjct: 167 AGRIESAMVVLKKMLD-KNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTV 225
Query: 468 TVNAMLKVYSRNDMFSKAKELFEET----TRANSSGY-TFLSGDG--------------- 507
+ NAML + A + +E + NS + T ++ G
Sbjct: 226 SFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEM 285
Query: 508 --APLKPDEYTYSSMLEASATA-HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
A L PD +TY+ M+EA A A + + FE ++ M +GC + + L+ +AG+
Sbjct: 286 RSAGLTPDVFTYTCMIEAFAKAGNMGKAFE-MFGDMEKAGCSANVVTYNLLIDALVKAGR 344
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFT 588
+ + + G +P + T
Sbjct: 345 YQDARDIYFDMKKKGILPDAITAT 368
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 150/365 (41%), Gaps = 29/365 (7%)
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
++V NAV+ A S + V F++L K G KP+A TY +C+++ LV+A
Sbjct: 14 VLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTY--------KCVIQSLVKA--- 62
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
G + A+ + M + G+ +Y + L +A + +KS+ +
Sbjct: 63 -GNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPAD-DY 120
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T+ LI S ++ +F M++ C P+ ++ +Y + A + ++
Sbjct: 121 TYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKM 180
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
N L PD+YT +S++ A + + E +++ M SG ++
Sbjct: 181 LDKN-------------LAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSF 227
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAMA 611
+L +AGK L D + G P+ + F LI + ++ Y +A ++ M
Sbjct: 228 NAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNT-LINCLGRAKYASEAYKVLQEMR 286
Query: 612 YAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSE 671
A +T + E+ + K ++ + +++ +T + L AL R +
Sbjct: 287 SAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQ 346
Query: 672 KERDL 676
RD+
Sbjct: 347 DARDI 351
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 39/264 (14%)
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM--RQKPSK 296
+A + EA+ FN+M E + P++AA++S+ L + +++ ++ ++M R P
Sbjct: 146 ARAQKVDEAVYTFNVM-EKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNSRFSPDA 204
Query: 297 RIKNMHRKNW-----------------DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ ++ + W D EPD+V Y ++++ + + + V +
Sbjct: 205 KTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQD 264
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ G +P+ Y VLV + E +I +AVA +ME+ G+V VY
Sbjct: 265 MTSRGCQPTTYIYS------------VLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVY 312
Query: 400 YELACCLCNNGRWQDAMLVVEKIKS---LRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
L C ++++A V+ ++ +S+ I LI D D+ +F+
Sbjct: 313 NALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILNHLISLGRD----DEAYKVFR 368
Query: 457 HMKDHCEPNIGTVNAMLKVYSRND 480
M C+P+ T M+K++ ND
Sbjct: 369 RMIKCCQPDCDTYTMMIKMFCEND 392
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 87/223 (39%), Gaps = 19/223 (8%)
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
R ++ G T Y+ + L ++Q L+ + + +R + + G+I+
Sbjct: 90 RRQKRGGCAHTVRSYHTVVASLAKIRQYQ---LMWDVVAVMRREGAVNVETFGIIMRKYA 146
Query: 445 GGH-IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
+D+ + F M+ + PN+ N++L ++ KA+E+F+ + NS
Sbjct: 147 RAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFD---KMNSR---- 199
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
PD TYS +LE A VY M +GC+ D + ++ +
Sbjct: 200 -------FSPDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKT 252
Query: 563 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
G+ + G P ++ ++ V+ E AVA
Sbjct: 253 GRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVA 295
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 38/238 (15%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGK 376
Y+ V+ + Q++ ++ V +R+ G + T+G+ M Y R K
Sbjct: 104 YHTVVASLAKIRQYQLMWDVVAVMRREG-AVNVETFGIIMRKYAR------------AQK 150
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
++EAV ME+ GVV + + L LC + + A + +K+ S R S P T++
Sbjct: 151 VDEAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNS-RFS-PDAKTYS 208
Query: 437 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT-- 493
L+ ++ ++ M D CEP+I T M+ + +A + ++ T
Sbjct: 209 ILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSR 268
Query: 494 --------------------RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
R + TFL + + PD Y++++ A A ++E
Sbjct: 269 GCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFE 326
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/416 (19%), Positives = 164/416 (39%), Gaps = 90/416 (21%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+E+ ++PD+ Y+++ + GLL+E +L++ M K L+P +
Sbjct: 123 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG---------------LKPCV 167
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG-LAMESYRR------------ 361
YNA++N + ++ V ++ K G+ P ATY L +E R
Sbjct: 168 FTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDE 227
Query: 362 ----------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
L+ + G +++A+ R+M+ G+ +Y L C NG
Sbjct: 228 MPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGV 287
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTV 469
+A+ V +++ L L++ I++ + + + +F M + P+ T
Sbjct: 288 MSEALKVRDEM--LEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 345
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
++ YS++ +KA LFE + N LKPD TY+++++ +
Sbjct: 346 TTLINGYSKDGNMNKAVTLFEMMIQRN-------------LKPDVVTYNTLIDGFCKGSE 392
Query: 530 WE--------------YFEYVYKGMALSG-CQLDQTKHAWLL--------VEAS------ 560
E Y ++ G+ ++G C + A+ L EA+
Sbjct: 393 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 452
Query: 561 ------RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
RAG + ++L G +P + + ++ I + N ++A AL+N M
Sbjct: 453 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 508
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 160/435 (36%), Gaps = 63/435 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL G + +A VLD + + D + Y LL + +A RIF+ M
Sbjct: 173 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT---YNILLVECCRNDNMMDAERIFDEMP 229
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNW------ 306
+ PD+ ++ ++ L + G L + +K M+ P I + +
Sbjct: 230 SQ-GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 288
Query: 307 -------DPVLEP----DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
D +LE D+V YN +LN +F ++ + G+ P T+
Sbjct: 289 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF--- 345
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+ + ++G +N+AV M QR + Y L C
Sbjct: 346 ---------TTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE---- 392
Query: 416 MLVVEKIKSL------RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGT 468
+EK+ L R P I++ LI + G + + ++ M + E I T
Sbjct: 393 ---MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 449
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
N ++K Y R KA E L G + PD TY++++
Sbjct: 450 CNTIVKGYCRAGNAVKADEFLSNM---------LLKG----IVPDGITYNTLINGFIKEE 496
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ + M SG D + +L SR G+ E ++E G P +T
Sbjct: 497 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 556
Query: 589 EMLIQAIVQSNYEKA 603
++ + Q+N ++A
Sbjct: 557 SLINGHVTQNNLKEA 571
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 112/302 (37%), Gaps = 27/302 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++ ++ N ++NA + + + + + G+ P TY L+
Sbjct: 93 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTY------------NTLIN 140
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
A+ +G + EA + +M +G+ Y + LC G++ A V++++ + S
Sbjct: 141 AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMS- 199
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+ L++ ++ D IF M P++ + +A++ + S+N +A +
Sbjct: 200 PDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKY 259
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F + A L PD Y+ ++ V M GC LD
Sbjct: 260 FRDMKNAG-------------LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLD 306
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+ +L + + F + E G P FT ++ N KAV L
Sbjct: 307 VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFE 366
Query: 609 AM 610
M
Sbjct: 367 MM 368
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 23/259 (8%)
Query: 340 LRKSGLKPSAATYGLAMESYRRC-----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
+RKSG+ L + +Y C + +LVR + + K+ E A R ++ +G+
Sbjct: 2 VRKSGVSRVEIVESLVL-TYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCV 60
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH-IDDCIS 453
+ + L L G W D + + + +R + + ++I+++ I++ S
Sbjct: 61 SINACNSLLGGLVKVG-WVDLAWEIYQ-EVVRSGVQVNVYTLNIMINALCKNQKIENTKS 118
Query: 454 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
M++ P++ T N ++ Y R + +A EL + +SG G LKP
Sbjct: 119 FLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDS-----------MSGKG--LKP 165
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
+TY++++ ++ + V M G D + LLVE R E F
Sbjct: 166 CVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIF 225
Query: 573 DSLLEAGEIPHPLFFTEML 591
D + G +P + F+ ++
Sbjct: 226 DEMPSQGVVPDLVSFSALI 244
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 162/403 (40%), Gaps = 46/403 (11%)
Query: 192 QMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
Q L ++ G + L++ + + L S +T LL + K A+ +
Sbjct: 39 QFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLV 98
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
M + PD + V +L + L+ ++ M + LE
Sbjct: 99 KEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLG---------------LE 143
Query: 312 PDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
P +V + ++N CV + V V + K+G + TYG VL+
Sbjct: 144 PSVVTFTILINGLCVKGDVGRAVELV-DHVEKTGYRSDVKTYG------------VLING 190
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSK 429
+ GK +EAV +R ME+R VY + LC +G +A+ L +E S + K
Sbjct: 191 LCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEM--SGKGIK 248
Query: 430 PLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P +T+T LI + G + S+ + MK P++ ++N ++ V + +AK +
Sbjct: 249 PNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSV 308
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
G+ L G+ PD +TY+S+++ +Q + V++ M GC D
Sbjct: 309 I---------GFMILVGE----VPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPD 355
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ + + H D +++ G P + +T ++
Sbjct: 356 IVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLI 398
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 140/347 (40%), Gaps = 33/347 (9%)
Query: 144 EWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDK 203
E H + + + V+++ L ++ A + + M + GL + L+ GL K
Sbjct: 100 EMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVK 159
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G +A+ ++D V + D+K+ Y L+ L K G+ EA+ M E+ N P+
Sbjct: 160 GDVGRAVELVDHVEKTGYRSDVKT---YGVLINGLCKMGKTSEAVGWLRKM-EERNWNPN 215
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y +V L + GL+ E + L M K K P+LV Y ++
Sbjct: 216 VVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIK---------------PNLVTYTCLIQG 260
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
+WK + ++ K G+ P + L +LV +EGKI +A +
Sbjct: 261 LCNFGRWKEAGSLLDEMMKMGVMPDLQS------------LNILVDVLCKEGKIMQAKSV 308
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 443
+ M G V Y L C + +A V E + S R P + +T LI
Sbjct: 309 IGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVS-RGCLPDIVAYTSLIHGWC 367
Query: 444 DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+I+ + + M K P++ T ++ + + AKELF
Sbjct: 368 KIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELF 414
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 149/371 (40%), Gaps = 61/371 (16%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTK-L 234
+F+R M + +G + L+ GL +G A+ + W L+ + + V T L
Sbjct: 509 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL--WFRLLE--KGFGANLVTTNAL 564
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L K G EA+R+ MLE D Y+++ + G ++E KL M ++
Sbjct: 565 IHGLCKTGNMQEAVRLLKKMLER-GFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 623
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+EPD YN +++ + ++ + + L P+ TYG+
Sbjct: 624 ---------------IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 668
Query: 355 AMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
++ Y + + L+RA+ G EA +M +G
Sbjct: 669 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 728
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
+ T + Y L +CN GR +DA ++++++ P + +T LI G +D
Sbjct: 729 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRK-EGLLPNVVCYTALIGGYCKLGQMDKV 787
Query: 452 ISIFQHMKDH-CEPNIGTVNAMLKVYSRN-DMFSKAKELFEETTRANSSGYTFLSGDGAP 509
+++ Q M + PN T M+ YS++ DM + AK L E G
Sbjct: 788 VNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV--------------GKG 833
Query: 510 LKPDEYTYSSM 520
+ PD TY+ +
Sbjct: 834 IVPDTVTYNVL 844
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 133/338 (39%), Gaps = 28/338 (8%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSL 425
L+ + G + EAV ++ M +RG V Y L C G+ ++ L E +K
Sbjct: 564 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK-- 621
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
+ +P T+ LI G +D+ ++++ K PN+ T M+ Y + D +
Sbjct: 622 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 681
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA-TAHQWEYFEYVYKGMALS 543
++LF E N L+ + Y++++ A + E F+ ++ M
Sbjct: 682 GEKLFTELLTQN-------------LELNSVVYNTLIRAYCRNGNTVEAFK-LHDDMRSK 727
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
G ++ L+ G+ + D + + G +P+ + +T ++ +K
Sbjct: 728 GIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKV 787
Query: 604 VALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA 663
V ++ M+ H + +T + + KLL+ + +T + L+
Sbjct: 788 VNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLT-- 845
Query: 664 LHALCRSEK--ERDLSSSAHFGSQAIDISPLHGIHEAF 699
+ C+ K E L + G SPL IHEAF
Sbjct: 846 -NGFCKEGKIEEGKLLAEDGVGFN----SPLFLIHEAF 878
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 62/374 (16%), Positives = 142/374 (37%), Gaps = 54/374 (14%)
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
WV+ + ++++ + K G+ +A+++F +E + P++ Y+++ L
Sbjct: 300 WVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLF-FDMEKLGVSPNVVTYNNLIHGL 358
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G L E + E+M + + L+ Y+ ++N + ++
Sbjct: 359 CKHGNLDEAFRFKEKMVKDG---------------VNATLITYSVLINGLMKLEKFNEAN 403
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRR-----------------------CLLKVLVRAF 371
V K+ + G P+ Y ++ Y + L +++ F
Sbjct: 404 SVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGF 463
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ G++ +A + M RG + + LC N R++ A+ + ++ LR+ +P
Sbjct: 464 CKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREML-LRNMRPN 522
Query: 432 EITFTGLIISSMDGGHIDDCISI-FQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ T L+ G D + + F+ ++ N+ T NA++ + +A L +
Sbjct: 523 DGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLK 582
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ G+ D+ TY++++ + E + M G + D
Sbjct: 583 KMLE---RGFVL----------DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTF 629
Query: 551 KHAWLLVEASRAGK 564
+ L+ R GK
Sbjct: 630 TYNLLIHGMCRIGK 643
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P + +L++ V +++ + +WVF+ +R+ G+ P + A + AF
Sbjct: 277 PTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTA------------INAF 323
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ GK+ +A+ +ME+ GV Y L LC +G +A EK+ + L
Sbjct: 324 CKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATL 383
Query: 432 EITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYS-----------RN 479
IT++ LI M ++ S+ + ++ PN N ++ Y R
Sbjct: 384 -ITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 442
Query: 480 DMFSKA 485
DM SK
Sbjct: 443 DMVSKG 448
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 153/381 (40%), Gaps = 62/381 (16%)
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
KG A+ V + + LKD + YT L+ G EAL++ + ML L P
Sbjct: 92 KGKIDLALKVFEEL--LKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSR-GLEP 148
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D Y+ + L + G + + + + + K PD++ YN +L
Sbjct: 149 DTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCK---------------PDVITYNILLR 193
Query: 323 ACVPSHQW-KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
A + +W +G W+ ++ G +P+ TY +L+ + +GKI E+V
Sbjct: 194 ALLNQGKWDEGEKWM-SEIFSRGCEPNVVTY------------SILISSLCRDGKIEESV 240
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
V+ M+++G+ A Y L C G+ A+ ++ + P + + ++ +
Sbjct: 241 NLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMIC-DGFLPDIVNYNTIMAA 299
Query: 442 SMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLK-VYSRND----------MFSKAKELF 489
G+ D + IF + + C PN+ + N ML ++S D M SK
Sbjct: 300 LCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKG---I 356
Query: 490 EETTRANSSGYTFLSGDG--------------APLKPDEYTYSSMLEASATAHQWEYFEY 535
+ +S + L DG +P+ +Y ++L AH+ +
Sbjct: 357 DPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIE 416
Query: 536 VYKGMALSGCQLDQTKHAWLL 556
V M +GCQ ++T + L+
Sbjct: 417 VLAAMIENGCQPNETTYTLLI 437
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 136/330 (41%), Gaps = 33/330 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
V+ L + + ++FVR +N G LL+ L ++G W + W+ +
Sbjct: 155 VITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEK---WMSEI 211
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ + Y+ L++ L + G+ E++ + +M E L PD Y + + G
Sbjct: 212 FSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEK-GLTPDAYCYDPLIAAFCREGK 270
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L ++ ++ M D L PD+V YN ++ A + +F +
Sbjct: 271 LDMAIEFLDCMI--------------CDGFL-PDIVNYNTIMAALCKNGNGDHAVEIFGK 315
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
L + G P+ ++Y ++ A W G A+ + M +G+ Y
Sbjct: 316 LDEVGCPPNVSSY------------NTMLSALWSSGDRYRALGMISQMLSKGIDPDVITY 363
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 458
L CLC +G +A+ ++ + S R +P +++ +++ IDD I + M
Sbjct: 364 NSLISCLCRDGMVDEAIGLLADMLSGRF-QPNIVSYKTVLLGLCKAHRIDDAIEVLAAMI 422
Query: 459 KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
++ C+PN T +++ + ++A EL
Sbjct: 423 ENGCQPNETTYTLLIEGIGFSGSRTQAMEL 452
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 133/354 (37%), Gaps = 49/354 (13%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ AY++V + ++ +++RM++K PD+V +N ++
Sbjct: 42 PDVFAYNAVISGFCKANRIESAKTVLDRMKRKG---------------FSPDVVTHNIMI 86
Query: 322 NACVPSHQWKGVFWVFKQLRK-SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA 380
+ VF++L K + KP+ TY +L+ A+ EG I+EA
Sbjct: 87 GTFCGKGKIDLALKVFEELLKDNNCKPTLITY------------TILIEAYILEGGIDEA 134
Query: 381 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 440
+ + M RG+ Y + LC G+ A V + S R KP IT+ L+
Sbjct: 135 LKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNS-RGCKPDVITYNILLR 193
Query: 441 SSMDGGHIDD----CISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
+ ++ G D+ IF CEPN+ T + ++ R+ ++ L +
Sbjct: 194 ALLNQGKWDEGEKWMSEIFSR---GCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKG 250
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
L PD Y Y ++ A + + M G D + ++
Sbjct: 251 -------------LTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIM 297
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ G F L E G P+ + ML + +A+ +I+ M
Sbjct: 298 AALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQM 351
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 113/306 (36%), Gaps = 27/306 (8%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+PD+++ ++ S V L K G KP Y ++
Sbjct: 7 QPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAY------------NAVISG 53
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
F + +I A + M+++G + + C G+ A+ V E++ + KP
Sbjct: 54 FCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKP 113
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
IT+T LI + + G ID+ + + M EP+ T N + + + K F
Sbjct: 114 TLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKE---GKVDRAF 170
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
E NS G KPD TY+ +L A +W+ E + GC+ +
Sbjct: 171 EFVRTLNSRG----------CKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNV 220
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
++ L+ R GK + + E G P + ++ + + A+ ++
Sbjct: 221 VTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDC 280
Query: 610 MAYAPF 615
M F
Sbjct: 281 MICDGF 286
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 127/301 (42%), Gaps = 27/301 (8%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+PD+ Y ++N + +FK++ ++G +P TY ++S
Sbjct: 7 QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDS------------ 54
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
++ ++NEA+ M+ +G+ Y L LCN RW++A ++ ++ SL + P
Sbjct: 55 LCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSL-NIMP 113
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+TF+ LI G++ + + + M + EPN+ T ++++ YS +A++LF
Sbjct: 114 NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLF 173
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
+ KPD ++Y+ ++ A + + ++ M G D
Sbjct: 174 DVMITKGC-------------KPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDI 220
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
+ L+ + G+ F ++L G +P ++ +L Q KA L A
Sbjct: 221 VSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRA 280
Query: 610 M 610
M
Sbjct: 281 M 281
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/368 (17%), Positives = 141/368 (38%), Gaps = 45/368 (12%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ Y ++ L ++G L ++M + +PD+V Y+ ++
Sbjct: 8 PDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGC---------------QPDVVTYSTII 52
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
++ + +F ++ G+ P+ TY L++ + EA
Sbjct: 53 DSLCKDRRVNEALDIFSYMKAKGISPNIFTY------------NSLIQGLCNFSRWREAS 100
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
A + M ++ + L C G +A V++ + + +P +T++ L+
Sbjct: 101 AMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEM-GVEPNVVTYSSLMNG 159
Query: 442 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
+ + +F M C+P++ + N ++ Y + +AK+LF E
Sbjct: 160 YSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG---- 215
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
L PD +Y+++++ + ++K M +G D ++ LL
Sbjct: 216 ---------LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFC 266
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS-NYEKAVALINAMAYAPFHITE 619
+ G F ++ P+ + + +LI A+ +S N ++A L + +
Sbjct: 267 KQGYLAKAFRLFRAMQSTYLKPNMVMY-NILIDAMCKSRNLKEARKLFSELFVQGLQPNM 325
Query: 620 RQWTELFE 627
+ W +LFE
Sbjct: 326 KHW-KLFE 332
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 108/264 (40%), Gaps = 42/264 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL + WR+A ++L+ + L ++ + ++ L+ I K G EA + M
Sbjct: 86 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVT---FSLLINIFCKEGNVFEARGVLKTMT 142
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK-----------------PSKRI 298
E + P++ Y S+ + E KL + M K +KRI
Sbjct: 143 E-MGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRI 201
Query: 299 ---KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
K + + L PD+V YN +++ + + +FK + +G P TY
Sbjct: 202 GEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTY--- 258
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+L+ F ++G + +A R M+ + +Y L +C + ++A
Sbjct: 259 ---------SILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEA 309
Query: 416 M-----LVVEKIK-SLRHSKPLEI 433
L V+ ++ +++H K EI
Sbjct: 310 RKLFSELFVQGLQPNMKHWKLFEI 333
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 111/530 (20%), Positives = 197/530 (37%), Gaps = 118/530 (22%)
Query: 117 KEMFEKDLNWVLDDDVQLGSDYFA-------KNVEWHPEKRWRSEAEAIRVLVDRLSE-- 167
KE+F + LN ++ + GS A K+ + P + + + DRL
Sbjct: 155 KEVFGQFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSAS 214
Query: 168 ---REMTAKNWKFVRIMNQSGLMFTEGQMLKLLK-GLGDKGSWRQAMSVLDWVYGLKDKR 223
REM+ N + +G L+ L G WR+A+++++ + D
Sbjct: 215 LIHREMSLANLRM------------DGFTLRCFAYSLCKVGKWREALTLVETENFVPDT- 261
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
YTKL++ L +A EA+ N M L P++ Y ++ L
Sbjct: 262 -----VFYTKLISGLCEASLFEEAMDFLNRMRATSCL-PNVVTYSTL------------L 303
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ + + KR+ NM P ++N++++A S + + K++ K
Sbjct: 304 CGCLNKKQLGRCKRVLNMMMMEG---CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKC 360
Query: 344 GLKPSAATYG-------------------LAMESYRRCLLKVLV----------RAFWEE 374
G P Y LA ++Y L +V R
Sbjct: 361 GHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA 420
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI- 433
GK +A + +R M +G + S Y ++ LCN + + A L+ E++K R ++
Sbjct: 421 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK--RGGLVADVY 478
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFE-- 490
T+T ++ S G I+ F M++ C PN+ T A++ Y + S A ELFE
Sbjct: 479 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 538
Query: 491 --ETTRANSSGYT----------------------------------FLSGDGAPLKPDE 514
E N Y+ F D +P+
Sbjct: 539 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 598
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
TY ++L+ +H+ E + M++ GC+ +Q + L+ + GK
Sbjct: 599 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 648
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 82/422 (19%), Positives = 148/422 (35%), Gaps = 64/422 (15%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L K G+ EAL ++E N PD Y + L + L +E + + RMR
Sbjct: 239 LCKVGKWREALT----LVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL- 293
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
P++V Y+ +L C+ Q V + G PS +
Sbjct: 294 --------------PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF----- 334
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ--DA 415
LV A+ G + A ++ M + G + VY L +C + D
Sbjct: 335 -------NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDL 387
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS-----------IFQHMKDHCEP 464
+ + EK S E+ G++++ ++ C+ I + + P
Sbjct: 388 LDLAEKAYS-------EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP 440
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
+ T + +L A LFEE R L D YTY+ M+++
Sbjct: 441 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGG-------------LVADVYTYTIMVDSF 487
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
A E + M GC + + L+ +A K F+++L G +P+
Sbjct: 488 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 547
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNA 644
+ ++ ++ EKA + M + + + ++ N +R + LL+
Sbjct: 548 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG 607
Query: 645 LC 646
C
Sbjct: 608 FC 609
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 49/263 (18%), Positives = 108/263 (41%), Gaps = 32/263 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT+++ L K G+ EA ++ +M E+ P++ Y ++ G +G ++ ++L+ER
Sbjct: 705 IYTEMIDGLCKVGKTDEAYKLMQMM-EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 763
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K + P+ V Y +++ C + + ++++++
Sbjct: 764 MGSKG---------------VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 808
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
A Y +E + + + E++ + + Q SVY L L
Sbjct: 809 AGYRKVIEGFNK--------------EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 854
Query: 410 GRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
R + A+ ++E++ + + T+ LI S ++ +F M K P +
Sbjct: 855 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 914
Query: 468 TVNAMLKVYSRNDMFSKAKELFE 490
+ +++K RN S+A L +
Sbjct: 915 SFCSLIKGLFRNSKISEALLLLD 937
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 123/348 (35%), Gaps = 66/348 (18%)
Query: 316 VYNAVLNACVPSHQWKGVFWV----FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
V+ LN V H G F + +L+ +PS +TY L++AF
Sbjct: 157 VFGQFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTY------------NCLIQAF 204
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ +++ A R M + A LC G+W++A+ +VE + P
Sbjct: 205 LKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET----ENFVPD 260
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ +T LI + ++ + M+ C PN+ T + +L + K +
Sbjct: 261 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVL- 319
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ +G P ++S++ A T+ Y + K M G
Sbjct: 320 ----------NMMMMEGC--YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 367
Query: 551 KHAWLLVEASRAGK--------CHLLEHAFDSLLEAGEIPHPL---FFTEMLIQAIVQSN 599
+ L+ S G L E A+ +L AG + + + FT L A
Sbjct: 368 VYNILI--GSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA---GK 422
Query: 600 YEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCN 647
YEKA ++I M F ++ K+LN LCN
Sbjct: 423 YEKAFSVIREMIGQGFIPDTSTYS----------------KVLNYLCN 454
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 99/263 (37%), Gaps = 50/263 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-------------VYTKLLAILGKAG 242
L+ G G +A + + + G KD D+ F Y LL K+
Sbjct: 553 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 612
Query: 243 RPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM----------- 290
R EA ++ + M +E C P+ Y ++ L +VG L E ++ M
Sbjct: 613 RVEEARKLLDAMSMEGCE--PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT 670
Query: 291 ------RQKPSKRIKNMHRKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
R KR +++ K +LE P++V+Y +++ + + + + +
Sbjct: 671 YSSLIDRYFKVKR-QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 729
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
+ G +P+ TY ++ F GKI + + M +GV Y
Sbjct: 730 EEKGCQPNVVTY------------TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 777
Query: 401 ELACCLCNNGRWQDAMLVVEKIK 423
L C NG A ++E++K
Sbjct: 778 VLIDHCCKNGALDVAHNLLEEMK 800
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 141/362 (38%), Gaps = 48/362 (13%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A SVL + L + D + + L + GK G EAL +F+ M+++ P++ Y
Sbjct: 110 AFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIG---EALHLFDKMIDE-GFQPNVVTYG 165
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L +VG ++L+ M Q +PD+V+Y +++++
Sbjct: 166 TLINGLCKVGNTSAAIRLLRSMEQGNC---------------QPDVVIYTSIIDSLCKDR 210
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
Q F +F Q+ G+ P TY LV A + + M
Sbjct: 211 QVTEAFNLFSQMVGQGISPDIFTY------------TSLVHALCNLCEWKHVTTLLNQMV 258
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
++ ++ + LC G+ +A +V+ + R +P +T+T L+ +
Sbjct: 259 NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ-RGVEPDVVTYTTLMDGHCLQSEM 317
Query: 449 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
D+ + +F M + P++ + ++ Y + KA LFEE R
Sbjct: 318 DEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE----------- 366
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
PD TY++++ + + ++ M G D ++ LL S CHL
Sbjct: 367 --WIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL--DSLCKNCHL 422
Query: 568 LE 569
E
Sbjct: 423 EE 424
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 154/365 (42%), Gaps = 54/365 (14%)
Query: 161 LVDRLS-EREMTAKNWKFVRIMNQ--SGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
++D L +R++T F +++ Q S +FT ++ L L + W+ ++L+
Sbjct: 202 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCE---WKHVTTLLNQ-- 256
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ + + L +++ ++ L K G+ EA I ++M++ + PD+ Y ++
Sbjct: 257 -MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR-GVEPDVVTYTTLMDGHCLQ 314
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
+ E VK+ + M +K PD++ Y ++N H+ ++F
Sbjct: 315 SEMDEAVKVFDMMVRKG---------------FAPDVISYTTLINGYCKIHKIDKAMYLF 359
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
+++ + P TY L+ G++ +A+A M RG +
Sbjct: 360 EEMCRKEWIPDTKTY------------NTLMHGLCHVGRLQDAIALFHEMVARGQMPDLV 407
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQ 456
Y L LC N ++AM +++ I++ + P +I +II M G ++ +F
Sbjct: 408 TYSILLDSLCKNCHLEEAMALLKAIEA-SNLNP-DIQVYNIIIDGMCRAGELEAARDLFS 465
Query: 457 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
++ P++ T N M+ + + ++A +LF E DG PD
Sbjct: 466 NLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM-------------DGNDCSPDGC 512
Query: 516 TYSSM 520
TY+++
Sbjct: 513 TYNTI 517
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/371 (18%), Positives = 144/371 (38%), Gaps = 30/371 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P +V + +L + + V + Q+ G+ P+ T L +L+ +F
Sbjct: 54 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYT------------LNILINSF 101
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
++ A + + + + G + + L LC G+ +A+ + +K+ +P
Sbjct: 102 CHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID-EGFQPN 160
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+T+ LI G+ I + + M + +C+P++ +++ ++ ++A LF
Sbjct: 161 VVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFS 220
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ G + PD +TY+S++ A +W++ + M S D
Sbjct: 221 QMV-------------GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVV 267
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ ++ + GK D +++ G P + +T ++ +QS ++AV + + M
Sbjct: 268 IFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 327
Query: 611 AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRS 670
F +T L DK L +C T + L +H LC
Sbjct: 328 VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL---MHGLCHV 384
Query: 671 EKERDLSSSAH 681
+ +D + H
Sbjct: 385 GRLQDAIALFH 395
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 117/309 (37%), Gaps = 38/309 (12%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+VD L + + + V +M Q G+ L+ G + +A+ V D +
Sbjct: 272 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 331
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ S YT L+ K + +A+ +F M PD Y+++ L VG L
Sbjct: 332 FAPDVIS---YTTLINGYCKIHKIDKAMYLFEEMCRK-EWIPDTKTYNTLMHGLCHVGRL 387
Query: 281 KELVKLIERM---RQKPS---------KRIKNMHRKNWDPVLE--------PDLVVYNAV 320
++ + L M Q P KN H + +L+ PD+ VYN +
Sbjct: 388 QDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNII 447
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA 380
++ + + + +F L GL PS TY +++ + G +NEA
Sbjct: 448 IDGMCRAGELEAARDLFSNLSSKGLHPSVWTY------------NIMIHGLCKRGLLNEA 495
Query: 381 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 440
M+ Y +A N A+ ++E++ + S +++ T L++
Sbjct: 496 NKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSA--DVSTTTLLV 553
Query: 441 SSMDGGHID 449
+ +D
Sbjct: 554 EMLSDDGLD 562
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 130/304 (42%), Gaps = 31/304 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L P+ V Y A+++ Q + F +F+++R+ G++P+ TY CL+ R
Sbjct: 69 LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTY--------NCLIGEWCR 120
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
G+ A + M RG+V Y L LC +G+ DA +++ +++ ++
Sbjct: 121 T----GEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRT-EGTR 175
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSR-NDMFSKAKE 487
P ITF L+ G + + + F MK +P+ T N ++ + R DM +
Sbjct: 176 PSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRA 235
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA-HQWEYFEYVYKGMALSGCQ 546
L + R L+P + TY+ ++++ A H + FE + GM +G +
Sbjct: 236 LSDMKERG--------------LEPTKVTYTILIDSFARENHMGKAFE-ILAGMEKAGLE 280
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
+D + L+ G F S+ E G P + + M+ + + KA+ L
Sbjct: 281 VDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKL 340
Query: 607 INAM 610
I M
Sbjct: 341 IMEM 344
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 103/256 (40%), Gaps = 46/256 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G A +LD ++ + S + L+ GKAG+ AL FN M
Sbjct: 149 LIAGLCRHGKLWDAAKLLDM---MRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQM- 204
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR--QKPSKRIKNMHRKNWDPVLEPD 313
A + AVT L+ R R + ++ + +M + LEP
Sbjct: 205 -------KAAGFQPSAVTYNM------LIAGFCRARDMTRANRALSDMKERG----LEPT 247
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG-----LAMESYRR------- 361
V Y ++++ + F + + K+GL+ A TYG L ME +
Sbjct: 248 KVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQ 307
Query: 362 -----------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+ +++ + EG +A+ + M Q+G++ ++ Y LC +
Sbjct: 308 SMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDD 367
Query: 411 RWQDAMLVVEKIKSLR 426
+ Q+A +++ ++++R
Sbjct: 368 KCQEAEALLDDMETIR 383
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 91/430 (21%), Positives = 163/430 (37%), Gaps = 93/430 (21%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G WR+A+++++ + D YTKL++ L +A EA+ N M L P+
Sbjct: 284 GKWREALTLVETENFVPDT------VFYTKLISGLCEASLFEEAMDFLNRMRATSCL-PN 336
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y ++ L + + + KR+ NM P ++N++++A
Sbjct: 337 VVTYSTL------------LCGCLNKKQLGRCKRVLNMMMMEG---CYPSPKIFNSLVHA 381
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYG-------------------LAMESYRRCLL 364
S + + K++ K G P Y LA ++Y L
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441
Query: 365 KVLV----------RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
+V R GK +A + +R M +G + S Y ++ LCN + +
Sbjct: 442 AGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMEL 501
Query: 415 AMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAM 472
A L+ E++K R ++ T+T ++ S G I+ F M++ C PN+ T A+
Sbjct: 502 AFLLFEEMK--RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 559
Query: 473 LKVYSRNDMFSKAKELFE----ETTRANSSGYT--------------------------- 501
+ Y + S A ELFE E N Y+
Sbjct: 560 IHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKD 619
Query: 502 -------FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
F D +P+ TY ++L+ +H+ E + M++ GC+ +Q +
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679
Query: 555 LLVEASRAGK 564
L+ + GK
Sbjct: 680 LIDGLCKVGK 689
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 81/415 (19%), Positives = 144/415 (34%), Gaps = 50/415 (12%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L K G+ EAL ++E N PD Y + L + L +E + + RMR
Sbjct: 280 LCKVGKWREALT----LVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL- 334
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
P++V Y+ +L C+ Q V + G PS +
Sbjct: 335 --------------PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF----- 375
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
LV A+ G + A ++ M + G + VY L +C + + L
Sbjct: 376 -------NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDL 428
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSM-----DGGHIDDCISIFQHMKDH-CEPNIGTVNA 471
+ K+ + + +SS G + S+ + M P+ T +
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
+L A LFEE R L D YTY+ M+++ A E
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGG-------------LVADVYTYTIMVDSFCKAGLIE 535
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ M GC + + L+ +A K F+++L G +P+ + ++ ++
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
Query: 592 IQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALC 646
EKA + M + + + ++ N +R + LL+ C
Sbjct: 596 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 125/348 (35%), Gaps = 66/348 (18%)
Query: 316 VYNAVLNACVPSHQWKGVFWV----FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
V+ LN V H G F + +L+ +PS +TY L++AF
Sbjct: 198 VFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTY------------NCLIQAF 245
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ +++ A R M + A LC G+W++A+ +VE + P
Sbjct: 246 LKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET----ENFVPD 301
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ +T LI + ++ + M+ C PN+ T + +L + K +
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVL- 360
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ +G P ++S++ A T+ Y + K M G
Sbjct: 361 ----------NMMMMEGC--YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408
Query: 551 KHAWLLVEASRAG-----KCHLL---EHAFDSLLEAGEIPHPL---FFTEMLIQAIVQSN 599
+ L+ S G C LL E A+ +L AG + + + FT L A
Sbjct: 409 VYNILI--GSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA---GK 463
Query: 600 YEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCN 647
YEKA ++I M F ++ K+LN LCN
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYS----------------KVLNYLCN 495
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 49/263 (18%), Positives = 108/263 (41%), Gaps = 32/263 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT+++ L K G+ EA ++ +M E+ P++ Y ++ G +G ++ ++L+ER
Sbjct: 746 IYTEMIDGLCKVGKTDEAYKLMQMM-EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K + P+ V Y +++ C + + ++++++
Sbjct: 805 MGSKG---------------VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
A Y +E + + + E++ + + Q SVY L L
Sbjct: 850 AGYRKVIEGFNK--------------EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 895
Query: 410 GRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
R + A+ ++E++ + + T+ LI S ++ +F M K P +
Sbjct: 896 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 955
Query: 468 TVNAMLKVYSRNDMFSKAKELFE 490
+ +++K RN S+A L +
Sbjct: 956 SFCSLIKGLFRNSKISEALLLLD 978
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 99/263 (37%), Gaps = 50/263 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-------------VYTKLLAILGKAG 242
L+ G G +A + + + G KD D+ F Y LL K+
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 243 RPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM----------- 290
R EA ++ + M +E C P+ Y ++ L +VG L E ++ M
Sbjct: 654 RVEEARKLLDAMSMEGCE--PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT 711
Query: 291 ------RQKPSKRIKNMHRKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
R KR +++ K +LE P++V+Y +++ + + + + +
Sbjct: 712 YSSLIDRYFKVKR-QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
+ G +P+ TY ++ F GKI + + M +GV Y
Sbjct: 771 EEKGCQPNVVTY------------TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 401 ELACCLCNNGRWQDAMLVVEKIK 423
L C NG A ++E++K
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMK 841
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/384 (20%), Positives = 152/384 (39%), Gaps = 52/384 (13%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + + + + +K + M GL L++GL G QA SV +
Sbjct: 335 LIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHG 394
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ + ++ L KAGR A+RIF M E L P+ Y ++ L + +
Sbjct: 395 CVPDV---VTLSTMIDGLSKAGRIGAAVRIFKSM-EARGLAPNEVVYSALIHGLCKARKM 450
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
++++ +M++ PD + YN +++ S + F ++
Sbjct: 451 DCALEMLAQMKKA---------------FCTPDTITYNILIDGLCKSGDVEAARAFFDEM 495
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
++G KP TY +L+ + G + A + +M + VY
Sbjct: 496 LEAGCKPDVYTY------------NILISGLCKAGNTDAACGVLDDMSS-----SRFVYS 538
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 460
L LC +G+ + ++ +++ R T T LI +D+ +S+F ++
Sbjct: 539 SLVDGLCKSGKLEGGCMLFHEME--RSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRK 596
Query: 461 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 520
P+ N+++ ++ ++ + +++E TR KPD TY+++
Sbjct: 597 EGMPHPYAYNSIISALIKSGKVNEGQAVYQEMTRW--------------WKPDRVTYNAL 642
Query: 521 LEASATAHQWEYFEYVYKGMALSG 544
L A++ + Y Y M G
Sbjct: 643 LNGMIGANRMDRAHYYYLEMTGRG 666
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/426 (19%), Positives = 170/426 (39%), Gaps = 42/426 (9%)
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-GLKPSA 349
R K + N+ + + PD+ +N ++ + + + F V +++ + G+ PS
Sbjct: 131 RTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSL 190
Query: 350 ATYGLAM----------------ESYRRCL------LKVLVRAFWEEGKINEAVAAVRNM 387
T+ L + E+ RR + +L+ + G + +A + +
Sbjct: 191 KTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQET 250
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
G Y + L N + Q+A+ ++EKI + P T+ L+ G
Sbjct: 251 TTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITA-NGCTPTIATYNALLNGLCKMGR 309
Query: 448 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
+++ I + + + D+ C P++ T +++ + +A +LF+E ++
Sbjct: 310 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKE-----------MASR 358
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
G L D Y++++ + VYK M GC D + ++ S+AG+
Sbjct: 359 GLAL--DTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIG 416
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA---PFHITERQWT 623
F S+ G P+ + ++ ++ + A+ ++ M A P IT
Sbjct: 417 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILI 476
Query: 624 E-LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHF 682
+ L +S + +R +++L A C + + I +S L +A + D+SSS
Sbjct: 477 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFV 536
Query: 683 GSQAID 688
S +D
Sbjct: 537 YSSLVD 542
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 146/378 (38%), Gaps = 60/378 (15%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
DI Y ++ L + ++E V L+E++ P + YNA+LN
Sbjct: 258 DIHTYTAIVNWLAKNKKIQEAVALMEKITANGCT---------------PTIATYNALLN 302
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATY-----GL-----AMESYR------------ 360
+ + + +++ +G P TY GL + E+Y+
Sbjct: 303 GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLAL 362
Query: 361 -RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
L+R + GKI +A + + M G V + L GR A+ +
Sbjct: 363 DTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIF 422
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSR 478
+ +++ R P E+ ++ LI +D + + MK C P+ T N ++ +
Sbjct: 423 KSMEA-RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 481
Query: 479 NDMFSKAKELFEETTRANSSG--YTF---LSG-------DGA-----PLKPDEYTYSSML 521
+ A+ F+E A YT+ +SG D A + + YSS++
Sbjct: 482 SGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLV 541
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
+ + + E ++ M SG QT+ L+ +A + F+++ + G +
Sbjct: 542 DGLCKSGKLEGGCMLFHEMERSGVANSQTR-TRLIFHLCKANRVDEAVSLFNAIRKEG-M 599
Query: 582 PHPLFFTEMLIQAIVQSN 599
PHP + +I A+++S
Sbjct: 600 PHPYAYNS-IISALIKSG 616
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 111/530 (20%), Positives = 197/530 (37%), Gaps = 118/530 (22%)
Query: 117 KEMFEKDLNWVLDDDVQLGSDYFA-------KNVEWHPEKRWRSEAEAIRVLVDRLSE-- 167
KE+F + LN ++ + GS A K+ + P + + + DRL
Sbjct: 196 KEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSAS 255
Query: 168 ---REMTAKNWKFVRIMNQSGLMFTEGQMLKLLK-GLGDKGSWRQAMSVLDWVYGLKDKR 223
REM+ N + +G L+ L G WR+A+++++ + D
Sbjct: 256 LIHREMSLANLRM------------DGFTLRCFAYSLCKVGKWREALTLVETENFVPDT- 302
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
YTKL++ L +A EA+ N M L P++ Y ++ L
Sbjct: 303 -----VFYTKLISGLCEASLFEEAMDFLNRMRATSCL-PNVVTYSTL------------L 344
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ + + KR+ NM P ++N++++A S + + K++ K
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEG---CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKC 401
Query: 344 GLKPSAATYG-------------------LAMESYRRCLLKVLV----------RAFWEE 374
G P Y LA ++Y L +V R
Sbjct: 402 GHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA 461
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI- 433
GK +A + +R M +G + S Y ++ LCN + + A L+ E++K R ++
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK--RGGLVADVY 519
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFE-- 490
T+T ++ S G I+ F M++ C PN+ T A++ Y + S A ELFE
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 491 --ETTRANSSGYT----------------------------------FLSGDGAPLKPDE 514
E N Y+ F D +P+
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 639
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
TY ++L+ +H+ E + M++ GC+ +Q + L+ + GK
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 689
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 81/415 (19%), Positives = 144/415 (34%), Gaps = 50/415 (12%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L K G+ EAL ++E N PD Y + L + L +E + + RMR
Sbjct: 280 LCKVGKWREALT----LVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL- 334
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
P++V Y+ +L C+ Q V + G PS +
Sbjct: 335 --------------PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF----- 375
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
LV A+ G + A ++ M + G + VY L +C + + L
Sbjct: 376 -------NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDL 428
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSM-----DGGHIDDCISIFQHMKDH-CEPNIGTVNA 471
+ K+ + + +SS G + S+ + M P+ T +
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
+L A LFEE R L D YTY+ M+++ A E
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGG-------------LVADVYTYTIMVDSFCKAGLIE 535
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ M GC + + L+ +A K F+++L G +P+ + ++ ++
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
Query: 592 IQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALC 646
EKA + M + + + ++ N +R + LL+ C
Sbjct: 596 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 125/348 (35%), Gaps = 66/348 (18%)
Query: 316 VYNAVLNACVPSHQWKGVFWV----FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
V+ LN V H G F + +L+ +PS +TY L++AF
Sbjct: 198 VFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTY------------NCLIQAF 245
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ +++ A R M + A LC G+W++A+ +VE + P
Sbjct: 246 LKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET----ENFVPD 301
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ +T LI + ++ + M+ C PN+ T + +L + K +
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVL- 360
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ +G P ++S++ A T+ Y + K M G
Sbjct: 361 ----------NMMMMEGC--YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408
Query: 551 KHAWLLVEASRAG-----KCHLL---EHAFDSLLEAGEIPHPL---FFTEMLIQAIVQSN 599
+ L+ S G C LL E A+ +L AG + + + FT L A
Sbjct: 409 VYNILI--GSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA---GK 463
Query: 600 YEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCN 647
YEKA ++I M F ++ K+LN LCN
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYS----------------KVLNYLCN 495
Score = 42.7 bits (99), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 49/263 (18%), Positives = 108/263 (41%), Gaps = 32/263 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT+++ L K G+ EA ++ +M E+ P++ Y ++ G +G ++ ++L+ER
Sbjct: 746 IYTEMIDGLCKVGKTDEAYKLMQMM-EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLER 804
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K + P+ V Y +++ C + + ++++++
Sbjct: 805 MGSKG---------------VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
A Y +E + + + E++ + + Q SVY L L
Sbjct: 850 AGYRKVIEGFNK--------------EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKA 895
Query: 410 GRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
R + A+ ++E++ + + T+ LI S ++ +F M K P +
Sbjct: 896 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQ 955
Query: 468 TVNAMLKVYSRNDMFSKAKELFE 490
+ +++K RN S+A L +
Sbjct: 956 SFCSLIKGLFRNSKISEALLLLD 978
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 99/263 (37%), Gaps = 50/263 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-------------VYTKLLAILGKAG 242
L+ G G +A + + + G KD D+ F Y LL K+
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 243 RPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM----------- 290
R EA ++ + M +E C P+ Y ++ L +VG L E ++ M
Sbjct: 654 RVEEARKLLDAMSMEGCE--PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT 711
Query: 291 ------RQKPSKRIKNMHRKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
R KR +++ K +LE P++V+Y +++ + + + + +
Sbjct: 712 YSSLIDRYFKVKR-QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
+ G +P+ TY ++ F GKI + + M +GV Y
Sbjct: 771 EEKGCQPNVVTY------------TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 401 ELACCLCNNGRWQDAMLVVEKIK 423
L C NG A ++E++K
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMK 841
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 39/281 (13%)
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+F ++ K G + + TY + + Y R ++ K++ A+ + M++ G
Sbjct: 4 LFYRMMKDGCEATVVTYTVIIHGYLR-----------QKSKLDHALRLLEVMKESGKKPD 52
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
+Y L L N+GR + A +++ +K + S L +T+T LI + G + DC +F
Sbjct: 53 EILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANL-VTYTNLIKEYANAGRLQDCRKLF 111
Query: 456 QHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG--YTF---------- 502
Q MKD E PN T NA+++ Y R +F +A EL++E + +T+
Sbjct: 112 QEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKR 171
Query: 503 ------------LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ G P PD+ TY+++L+ A + + + M +G + +
Sbjct: 172 GLLEDMERLLDEMDTKGVP--PDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIW 229
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ +L A + F++L G +P+ + ++ ML
Sbjct: 230 TYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAML 270
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 150/373 (40%), Gaps = 46/373 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+Y L+ L +GR A +I + M +D + ++ Y ++ G L++ KL +
Sbjct: 54 ILYNCLVNGLVNSGRLEAAEKILDDMKQD-KVSANLVTYTNLIKEYANAGRLQDCRKLFQ 112
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M+ K P+ YNA++ +K ++ ++ G
Sbjct: 113 EMKDKGES---------------PNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKD 157
Query: 349 AATYGLAMESY-RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
TY +A+ Y +R LL+ + R E M+ +GV Y L
Sbjct: 158 VHTYNIAIAMYGKRGLLEDMERLLDE-------------MDTKGVPPDQVTYNTLLDVYA 204
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
+ A ++ ++ + +P T+ ++ S+ + + +F+++K PNI
Sbjct: 205 KKSYFVKAHEILREMTEAGY-RPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNI 263
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T +AML +Y R+ ++++A +L++E A P YS ++E+
Sbjct: 264 VTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCI-------------PCIIAYSGLIESYGH 310
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
++ ++ M SG D + L+ +AG+C E + + + G +P +
Sbjct: 311 HGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGIT 370
Query: 587 FTEMLIQAIVQSN 599
+ +L++A +
Sbjct: 371 YG-ILVRAFANAG 382
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 28/159 (17%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
LK K + + Y+ +L++ G+ G EA ++++ M+E P I AY + + G G
Sbjct: 254 LKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIE-AGCIPCIIAYSGLIESYGHHG 312
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ +E + + MR+ + PD +Y A+++A + + + ++
Sbjct: 313 MYQEALACFQDMRKSG---------------IVPDTKIYTALMDAYGKAGRCREAELLYF 357
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
++ K G P TYG +LVRAF G++
Sbjct: 358 EMTKEGFVPDGITYG------------ILVRAFANAGRL 384
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 94/450 (20%), Positives = 173/450 (38%), Gaps = 72/450 (16%)
Query: 137 DYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKL 196
D FA N + + +A RVL DR+ ++ + + IM
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVL-DRMRSKDFSPDTVTY-NIM--------------- 199
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
+ L +G A+ VL+ + L D + YT L+ G EAL++ + ML
Sbjct: 200 IGSLCSRGKLDLALKVLNQL--LSDNCQ-PTVITYTILIEATMLEGGVDEALKLMDEMLS 256
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
L PD+ Y+++ + + G++ +++ + K S EPD++
Sbjct: 257 R-GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGS---------------EPDVIS 300
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGK 376
YN +L A + +W+ + ++ P+ TY +L+ +GK
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY------------SILITTLCRDGK 348
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
I EA+ ++ M+++G+ A Y L C GR A+ +E + S P + +
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS-DGCLPDIVNYN 407
Query: 437 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLK-VYSRNDMFSKAKELFEETTR 494
++ + G D + IF + + C PN + N M ++S D + E +
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN 467
Query: 495 A-------NSSGYTFLSGDG--------------APLKPDEYTYSSMLEASATAHQWEYF 533
+S + L +G P TY+ +L AH+ E
Sbjct: 468 GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 527
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
V + M +GC+ ++T + L+ AG
Sbjct: 528 INVLESMVGNGCRPNETTYTVLIEGIGFAG 557
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 111/518 (21%), Positives = 196/518 (37%), Gaps = 124/518 (23%)
Query: 186 LMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL------LAILG 239
L F + QMLK+ G++ +++ +L+ + D+ + TKL L +
Sbjct: 85 LGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDV---ILCTKLIKGFFTLRNIP 141
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
KA R E L F PD+ AY+++ ++ + + ++++RMR K
Sbjct: 142 KAVRVMEILEKFG--------QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD----- 188
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES- 358
PD V YN ++ + + V QL +P+ TY + +E+
Sbjct: 189 ----------FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEAT 238
Query: 359 ----------------YRRCL------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
R L ++R +EG ++ A VRN+E +G
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDV 298
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
Y L L N G+W++ ++ K+ S P +T++ LI + G I++ +++ +
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFS-EKCDPNVVTYSILITTLCRDGKIEEAMNLLK 357
Query: 457 HMK------------------------------------DHCEPNIGTVNAMLKVYSRND 480
MK D C P+I N +L +N
Sbjct: 358 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 481 MFSKAKELF----EETTRANSSGYTFL------SGD------------GAPLKPDEYTYS 518
+A E+F E NSS Y + SGD + PDE TY+
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 519 SMLEASATAHQW-EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDS 574
SM+ E FE + + + C+ + + +V K H +E A +S
Sbjct: 478 SMISCLCREGMVDEAFELL---VDMRSCEFHPSVVTYNIVLLGFC-KAHRIEDAINVLES 533
Query: 575 LLEAGEIPHPLFFTEMLIQAIVQSNYE-KAVALINAMA 611
++ G P+ +T +LI+ I + Y +A+ L N +
Sbjct: 534 MVGNGCRPNETTYT-VLIEGIGFAGYRAEAMELANDLV 570
>gi|297833394|ref|XP_002884579.1| EMB2750 [Arabidopsis lyrata subsp. lyrata]
gi|297330419|gb|EFH60838.1| EMB2750 [Arabidopsis lyrata subsp. lyrata]
Length = 486
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 159/407 (39%), Gaps = 85/407 (20%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR-FVYTKLLAILGKAGRPHEALRIFNLML 255
L L K W QA+ V D L+++ + + Y KLL +LGK+G+P+ A ++F+ ML
Sbjct: 95 LSDLIAKKQWLQALEVFDM---LREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEML 151
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ L P + Y ++ + L+ + +++ M+ P +PD+
Sbjct: 152 EE-GLEPTVELYTALLAAYTRSNLIDDAFSILDTMKGLPQ--------------CQPDVF 196
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y+ +L ACV + Q+ V ++K++ + + P+ T + + Y R G
Sbjct: 197 TYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRV------------G 244
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ ++ + +M +V TA C W
Sbjct: 245 RFDQMEKVLSDM----LVSTA----------CKPDVW----------------------- 267
Query: 436 TGLIISSMDG--GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T II S+ G G ID S ++ ++ EP T N ++ Y + M+ K + E
Sbjct: 268 TMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYM 327
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
+ T TY++++EA A + E + M G + D
Sbjct: 328 RKLEFPWTT-------------STYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTF 374
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
L+ + AG H + + L EIP F +I A +++
Sbjct: 375 CCLINGYANAGLFHKVISSV-QLAAKFEIPENTAFYNAVIAACAKAD 420
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 99/241 (41%), Gaps = 35/241 (14%)
Query: 358 SYRRCLL--------KVLVRAFWEEGK-------INEAVAAVRNMEQR-----GVVGTAS 397
S+ RC+L V + W++G+ +N ++N++++ G A+
Sbjct: 30 SFVRCVLAASKSSPGSVTKKRLWKDGEFPGITEPVNPRRTPIKNVKKKLDRRSKANGWAN 89
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
E L +W A+ V + ++ +P E T+ L++ G + +F
Sbjct: 90 TVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDE 149
Query: 458 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP-LKPDEY 515
M ++ EP + A+L Y+R+++ A + + + G P +PD +
Sbjct: 150 MLEEGLEPTVELYTALLAAYTRSNLIDDAFSILD-------------TMKGLPQCQPDVF 196
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
TYS++L+A A Q++ + +YK M + +L R G+ +E +
Sbjct: 197 TYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDM 256
Query: 576 L 576
L
Sbjct: 257 L 257
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 166/442 (37%), Gaps = 99/442 (22%)
Query: 234 LLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
++ L G+ EAL +F+ ++ D C L D+ L + G +E +K+++ M
Sbjct: 5 IVLCLCHVGKLDEALELFHSLVSDGCGLPADLLVRE-----LSKAGRAEECLKVVKLMLD 59
Query: 293 KPSKRIKNMHRKNWDPVLEPDL--------------------VVYNAVLNACVPSHQWKG 332
+ R +++ D + + D+ V YN ++NA + +
Sbjct: 60 RQQLRERHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDE 119
Query: 333 VFWVFKQLRKSGLKPSAATY-------------GLAMESYRRCL----------LKVLVR 369
+F +++ G PS +TY G A + Y R L +LV
Sbjct: 120 AIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVD 179
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
F + ++ EAV + + RG V T++ Y + L G+ +A L +++ +
Sbjct: 180 GFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEK-DGVR 238
Query: 430 PLEITFTGLI-----------------------------ISS--MDG----GHIDDCISI 454
P E+TFT LI I S MDG G +D+ I
Sbjct: 239 PQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRI 298
Query: 455 FQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 513
F+ M + C PN + N ++ + S+A+E+FEE + + KPD
Sbjct: 299 FELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQA-------------KPD 345
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
TYS+ ++ AH+ + V + G D + L+ G+ F+
Sbjct: 346 VVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFE 405
Query: 574 SLLEAGEIPHPLFFTEMLIQAI 595
+ A F +L+
Sbjct: 406 VDMRAAGCAPNNFTCNVLVNGF 427
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 143/353 (40%), Gaps = 44/353 (12%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
L P I + ++ L +VG + V+L + M K +PD+ YN
Sbjct: 159 LQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGC---------------QPDVYTYNT 203
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
++N + + K++ ++G +P+ TY L+ + + +NE
Sbjct: 204 IINGLCKIGETAAAAGLLKKMEEAGCQPNMVTY------------STLIDSLCRDRLVNE 251
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
A+ M+ +G+ Y L LC RW++A ++ ++ SL + P +TF L+
Sbjct: 252 ALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSL-NIMPDIVTFNVLV 310
Query: 440 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
+ G + + + + + M + EPN+ T ++++ YS +A++LF
Sbjct: 311 DTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGC- 369
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
KP+ ++Y+ ++ A + + ++ M G + + L+
Sbjct: 370 ------------KPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHG 417
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAM 610
+ GK + F ++ G +P LF +L+ + Y KA L AM
Sbjct: 418 FCQLGKLREAQDLFRNMCTNGNLPD-LFTYSILLDGFCKQGYLGKAFRLFRAM 469
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 33/183 (18%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ KA R EA+++FN M+ L P+ +Y+++ Q+G L+E L
Sbjct: 374 FSYNILINGYCKAKRIDEAMQLFNEMIHQ-GLTPNNVSYNTLIHGFCQLGKLREAQDLFR 432
Query: 289 RM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M +Q + + R L+P+LV+Y +++A S
Sbjct: 433 NMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSG 492
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
K +F +L GL+P Y ++ +EG ++EA+ A RNME
Sbjct: 493 NHKDARKLFSELFVQGLQPHVQLY------------TTIINGLCKEGLLDEALEAFRNME 540
Query: 389 QRG 391
G
Sbjct: 541 ADG 543
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/340 (18%), Positives = 131/340 (38%), Gaps = 48/340 (14%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + + M G+ L++GL W++A ++L+ + L
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN 298
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ + + L+ K G+ EAL + M E + P++ Y S+ +
Sbjct: 299 IMPDIVT---FNVLVDTFCKEGKVSEALGVLKTMTE-MGVEPNVVTYSSLMYGYSLWTDV 354
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E KL M K K P++ YN ++N + + +F ++
Sbjct: 355 VEARKLFHVMITKGCK---------------PNIFSYNILINGYCKAKRIDEAMQLFNEM 399
Query: 341 RKSGLKPSAATYGLAMESYRRCLL-------------------------KVLVRAFWEEG 375
GL P+ +Y + + C L +L+ F ++G
Sbjct: 400 IHQGLTPNNVSYNTLIHGF--CQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQG 457
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ +A R M+ + +Y L +C +G +DA + ++ ++ +P +
Sbjct: 458 YLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSEL-FVQGLQPHVQLY 516
Query: 436 TGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLK 474
T +I G +D+ + F++M+ D C P+ + N +++
Sbjct: 517 TTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIR 556
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 101/239 (42%), Gaps = 20/239 (8%)
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
I++A+A+ +M R + + +L + G++ D ++ + K L P T +
Sbjct: 73 IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132
Query: 437 GLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
+ +D S+ + +K +P I T ++ + F++A ELF++
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
+PD YTY++++ + + K M +GCQ + ++ L
Sbjct: 193 GC-------------QPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTL 239
Query: 556 LVEASRAGKCHLLEHAFD--SLLEAGEIPHPLFFTEMLIQAIVQ-SNYEKAVALINAMA 611
+ R L+ A D S ++A I +F LIQ + + S +++A AL+N M
Sbjct: 240 IDSLCRD---RLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMT 295
>gi|449449102|ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
gi|449510601|ref|XP_004163711.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial-like [Cucumis sativus]
Length = 849
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 168/397 (42%), Gaps = 53/397 (13%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A+S+ + + L +RD + +Y L+ L K+ R E+ ++ M E L P Y+
Sbjct: 474 ALSLFEDMVQLGCERD---QLLYNNLIDALCKSDRLKESYKLLRDM-EQSRLQPTHFTYN 529
Query: 269 SVAV-------TLGQVGLLKEL--------VKLIERMRQKPSKRIKNMHRKNW--DPVLE 311
S+ T+G + LL+E+ +K + ++ K + + N+ D V E
Sbjct: 530 SIFGCLCRREDTVGAIELLREMRGHGHEPWIKHSTLLVKQLCKNGRAIEASNFLADMVCE 589
Query: 312 ---PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLV 368
PD+V Y+A ++ V ++ +F+ + G +P ++ +L+
Sbjct: 590 GFLPDIVSYSAAMDGLVKINKLDRALELFQDICTRGCRPDVVSHN------------ILI 637
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
+ + + GK+NEA + M G+V +A Y L C NG A+L + ++ +
Sbjct: 638 KGYCKAGKVNEAYNFLHKMRVAGLVPSAVSYNLLINEWCKNGDIDKAILCLSQMNE-ENK 696
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKE 487
KP I++T LI + G DD ++ M++ C PN T A++ +
Sbjct: 697 KPTIISYTTLINGCCNSGRPDDAKILWNEMQEKGCSPNRITYMAIVHGLCK--------- 747
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
+ + + + S + +KPD Y ++++A + H + + K G
Sbjct: 748 ----CGKPDEALVYYHSMEEKEMKPDSYVSVALIDAFISKHNFSMAFNILKETIEKGNIP 803
Query: 548 DQTKHAWLLVEAS--RAGKCHLLEHAFDSLLEAGEIP 582
D T ++ ++ + + K +L+E G IP
Sbjct: 804 DPTDKNYVTIKDAIFKLSKDEQTGLEVKALIEKGRIP 840
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 88/432 (20%), Positives = 163/432 (37%), Gaps = 71/432 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ +++ L K G+ EAL + M E + PD+A Y + L + G + E +L +M
Sbjct: 13 YSTIISGLCKTGKVTEALEMVEEMTEK-GVNPDVATYTIIVDRLCRAGKVDEADELFHKM 71
Query: 291 RQKPS------------------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
++ K ++ M K + EPD + YN +L+
Sbjct: 72 IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGY----EPDNITYNTILSGLCR 127
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRN 386
+ F + G P Y L+ A ++EGK+ EA +
Sbjct: 128 MGKVSEAKQFFDSMPSRGYSPDVVAY------------NGLLDALYKEGKVAEAWGLFKT 175
Query: 387 MEQ--RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
M+ R V Y L C + +AM + + + + + P +T+ +++
Sbjct: 176 MDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIA-KGYMPDTVTYNSILLGLAR 234
Query: 445 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
++D+ +F+ M D C PN T + +L + R ++ EL+EE T S L
Sbjct: 235 KSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLL 294
Query: 504 ------------------------SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
S GA PD TY+ +L+ + + ++
Sbjct: 295 CNAVIDMLCKAKKVDDAHKVLEEMSKIGAV--PDVVTYNILLDGLCKTNLVDKAHELFST 352
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
M +GC D ++ +L + K H FD ++E +P + F ++
Sbjct: 353 MVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGK 412
Query: 600 YEKAVALINAMA 611
++A L++ M+
Sbjct: 413 LDEAKDLLDVMS 424
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 151/394 (38%), Gaps = 47/394 (11%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
EPD+V Y+ +++ + + + +++ + G+ P ATY ++V
Sbjct: 6 FEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATY------------TIIVD 53
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
GK++EA M +RG Y L LC + + A ++E++ S + +
Sbjct: 54 RLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMAS-KGYE 112
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKEL 488
P IT+ ++ G + + F M P++ N +L + ++A L
Sbjct: 113 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGL 172
Query: 489 FEETTRANS-------------SGYTFLSGDGAPLK-----------PDEYTYSSMLEAS 524
F+ A+ G+ + +K PD TY+S+L
Sbjct: 173 FKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGL 232
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
A + E ++K M SGC + ++ +L R G ++ + E P
Sbjct: 233 ARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDV 292
Query: 585 LF---FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKL 641
L +ML +A + K + ++ + P +T + L + DK +L
Sbjct: 293 LLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVT---YNILLDGLCKTNLVDKAHEL 349
Query: 642 LNALCNCNAASSEITVSNLSRALHALCRSEKERD 675
+ + + N + +I + S L+ LC++ K D
Sbjct: 350 FSTMVD-NGCAPDIV--SYSVVLNGLCKTNKVHD 380
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/451 (19%), Positives = 168/451 (37%), Gaps = 71/451 (15%)
Query: 147 PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQML--KLLKGLGDKG 204
P + + + A L+D L + A+ W + M+ + + L+ G
Sbjct: 142 PSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVE 201
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI 264
+AM + V K + Y +L L + EA +F M+ D P+
Sbjct: 202 KTDEAMKLFKDVIA---KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMV-DSGCAPNG 257
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQK-----------------PSKRIKNMHRKNWD 307
A Y V +VG + ++L E M +K +K++ + H+
Sbjct: 258 ATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHK---- 313
Query: 308 PVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
VLE PD+V YN +L+ ++ +F + +G P +Y
Sbjct: 314 -VLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY------- 365
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
V++ + K+++A M +R +V + L LC G+ +A ++
Sbjct: 366 -----SVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV------NAML 473
+ + S + P +T T L+ D+ + +FQ+M + GTV N +L
Sbjct: 421 D-VMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEK-----GTVADVLPHNIVL 474
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
R ++A F+ +++ PD TY++++ A A + +
Sbjct: 475 AGLCREGKLAQALLFFKSMVKSDGE-----------FSPDVVTYTTLVNALIEAGRVDQA 523
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
++ M SGC D + L+ + G+
Sbjct: 524 VDYFQQMTGSGCAPDYVAYNTLMNGLRKQGR 554
>gi|168036356|ref|XP_001770673.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678034|gb|EDQ64497.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 717
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 111/523 (21%), Positives = 199/523 (38%), Gaps = 90/523 (17%)
Query: 146 HPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGS 205
H E+ +A I + D L +R T + W+ ++++++SG +L+ L +G
Sbjct: 81 HTERTGDDDANLIEEMRDLLKQRR-TDEAWQVMQLLSRSGKFPDRQCTSRLVAQLSHRGV 139
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKA--GRPHEALRIFNLMLEDCNLYPD 263
+ L+ + + L L A G AL + NLM E ++YP
Sbjct: 140 PSCLARAQQVLTNLRKNNQVDLLDSDSLGLLALASARSGAARYALNVLNLMFE-MDIYPS 198
Query: 264 IAAYHSVAVTLGQ--------VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + +V LG+ + L E+ +LIE + S+ I + PD
Sbjct: 199 VKVWSAVVSRLGRHVDDCLLALELFDEVCRLIE---EAESQGIDVRSAR-------PDTG 248
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE- 374
+NA LNAC + +R+ GL+P + T+ ++ Y +C + L+++ +E
Sbjct: 249 AFNAALNACATLGFAAKGEDLMNSMRRCGLQPDSITFNTLIKLYAKCDQRKLLKSLPDEM 308
Query: 375 ----------------------GKINEAVAAVRNMEQRGVVGTAS--------------- 397
G + EA A +R ++ + G S
Sbjct: 309 VENKVMPDESTVNSLIAGYVGLGDLREAEALLRRLQDKSEQGNDSKTKSKSWWGAHLRPD 368
Query: 398 --VYYELACCLCNNGRWQDAM--LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
Y L GR DAM L+ ++ S P E+++T I S + G +D+
Sbjct: 369 VRTYTTLMKGYVQKGRRSDAMRTLLAMQMDKDPRSSPNEVSYTTAISSCVRLGLMDEATV 428
Query: 454 IFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKA----KELFEETTRANSSGYTFL----- 503
+ Q M H P N+ T N +LK Y KA K++ E + Y L
Sbjct: 429 VLQEMLKHNIPVNVITYNILLKGYCSARKLQKAHSVVKDMEEAGVALDVVSYNTLINGCI 488
Query: 504 -SGDGAP------------LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+GD A + P +Y+++++A Q + V++ M + ++
Sbjct: 489 ETGDNAAALDYFKKMRETGISPSAVSYTTLMKAFGRNGQPKQVHLVFEEMR-NDPRMKTD 547
Query: 551 KHAW--LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
AW LL R G+ + F + E +P + ++
Sbjct: 548 AVAWNVLLDSYCRNGRVADAKRMFLQMKEDRVLPTAFTYATLV 590
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 129/317 (40%), Gaps = 41/317 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+KG KG AM L + KD R + YT ++ + G EA + ML
Sbjct: 375 LMKGYVQKGRRSDAMRTLLAMQMDKDPRSSPNEVSYTTAISSCVRLGLMDEATVVLQEML 434
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N+ ++ Y+ LLK R QK +K+M + D+V
Sbjct: 435 KH-NIPVNVITYNI---------LLKGYCS--ARKLQKAHSVVKDMEEAG----VALDVV 478
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN ++N C+ + FK++R++G+ PSA +Y L++AF G
Sbjct: 479 SYNTLINGCIETGDNAAALDYFKKMRETGISPSAVSY------------TTLMKAFGRNG 526
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYE-LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
+ + M + T +V + L C NGR DA + ++K R P T
Sbjct: 527 QPKQVHLVFEEMRNDPRMKTDAVAWNVLLDSYCRNGRVADAKRMFLQMKEDR-VLPTAFT 585
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDHC-------EPNIGTVNAMLKVYSRNDMFSKAKE 487
+ L+ GG + + + +++ +K+ +P+ +N ++ R F KA E
Sbjct: 586 YATLVKGYALGGMLGEVLVLWKEIKERTDDEVNPLQPDEVLLNCLVDTCVRAGYFQKALE 645
Query: 488 LF----EETTRANSSGY 500
+ E+ AN + Y
Sbjct: 646 VVACMEEKGIPANKTKY 662
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 130/332 (39%), Gaps = 37/332 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLML--EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
YT L+ + GR +A+R M +D P+ +Y + + ++GL+ E ++
Sbjct: 371 TYTTLMKGYVQKGRRSDAMRTLLAMQMDKDPRSSPNEVSYTTAISSCVRLGLMDEATVVL 430
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ M K+ PV +++ YN +L + + + V K + ++G+
Sbjct: 431 QEML------------KHNIPV---NVITYNILLKGYCSARKLQKAHSVVKDMEEAGVAL 475
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+Y L+ E G A+ + M + G+ +A Y L
Sbjct: 476 DVVSYN------------TLINGCIETGDNAAALDYFKKMRETGISPSAVSYTTLMKAFG 523
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNI 466
NG+ + LV E++++ K + + L+ S G + D +F MK D P
Sbjct: 524 RNGQPKQVHLVFEEMRNDPRMKTDAVAWNVLLDSYCRNGRVADAKRMFLQMKEDRVLPTA 583
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T ++K Y+ M + L++E PL+PDE + +++
Sbjct: 584 FTYATLVKGYALGGMLGEVLVLWKEIKERTDDEVN-------PLQPDEVLLNCLVDTCVR 636
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
A ++ V M G ++TK+ + +E
Sbjct: 637 AGYFQKALEVVACMEEKGIPANKTKYKRIFIE 668
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 118/282 (41%), Gaps = 27/282 (9%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+PDLV Y V+N + K++ K ++ Y ++
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY------------NTIIDG 267
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ +++A+ M+ +G+ Y L CLCN GRW DA ++ + R P
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE-RKINP 326
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+TF+ LI + + G + + ++ M K +P+I T ++++ + +D +AK +F
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
E +S D P+ TYS++++ A + E +++ M+ G +
Sbjct: 387 E----------LMISKD---CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ +A C + F ++ G P+ L + +L
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/388 (19%), Positives = 144/388 (37%), Gaps = 78/388 (20%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y+ L++ L GR +A R+ + M+E + P++ + ++ + G L E KL +
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M ++ ++PD+ Y++++N + +F+ + P+
Sbjct: 353 EMIKRS---------------IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY L++ F + ++ E + R M QRG+VG
Sbjct: 398 VVTY------------STLIKGFCKAKRVEEGMELFREMSQRGLVGNT------------ 433
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 467
+T+T LI D+ +F+ M PNI
Sbjct: 434 ------------------------VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T N +L +N +KA +FE R+ ++PD YTY+ M+E A
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRST-------------MEPDIYTYNIMIEGMCKA 516
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
+ E ++ ++L G + + ++ R G + + E G +P+ +
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Query: 588 TEMLIQAIVQSNYEKAVALINAMAYAPF 615
++ + + E + LI M F
Sbjct: 577 NTLIRARLRDGDREASAELIKEMRSCGF 604
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/304 (19%), Positives = 123/304 (40%), Gaps = 36/304 (11%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
EPD+V +++LN S + + Q+ + G KP T+ L+
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF------------TTLIHG 197
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ K +EAVA V M QRG Y + LC G A+ +++K++ +
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 257
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+ + + +I H+DD +++F M + P++ T ++++ +S A L
Sbjct: 258 V-VIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 490 EETT--RANSSGYTFLSGDGAPLK--------------------PDEYTYSSMLEASATA 527
+ + N + TF + A +K PD +TYSS++
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
+ + +++++ M C + ++ L+ +A + F + + G + + + +
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 588 TEML 591
T ++
Sbjct: 437 TTLI 440
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/379 (20%), Positives = 155/379 (40%), Gaps = 41/379 (10%)
Query: 133 QLGSDYFAKN--VEW-HPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFT 189
+ GSD+ A W ++ +R A++ +VD L + + W + M++ G + +
Sbjct: 135 RFGSDWVAAFGFFMWAGAQEGYRHSADSYNSMVDILGKFKQFDLMWGLISQMDEIGGLVS 194
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALR 249
M K+++ L W A+ + + +D + V LL L K A
Sbjct: 195 LATMTKVMRRLAGASRWTDAIDAFNKMDQFGVVKDTTAMNV---LLDTLCKERSVKRARG 251
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
F + ++ PD ++++++ + ++ E +++ M + K
Sbjct: 252 AFQELRG--SVPPDESSFNTLVHGWCKARMMNEARDMMKEMEEHGFK------------- 296
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
P ++ Y +++ A ++ V+ + ++R G P+ TY + M
Sbjct: 297 --PSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMH------------ 342
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
A + G+ EA+ + G AS Y L L GR +DA VV+K++ + +
Sbjct: 343 ALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMR-MTGVR 401
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK-- 486
P TF LI ++ D ++ + + M++ C+P+I T +LK+ + +
Sbjct: 402 PTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCCKRQWIKVLRFL 461
Query: 487 --ELFEETTRANSSGYTFL 503
+F + + S YT L
Sbjct: 462 ICHMFRKDITPDFSTYTLL 480
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 30/220 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
YT ++ LGKAGR EAL IF+ + D PD + Y+S+ LG+ G L++ +++
Sbjct: 335 ITYTIVMHALGKAGRTQEALDIFDKVRGD-GCAPDASFYNSLIYILGRAGRLEDANSVVD 393
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+MR + P + +N +++A Q + + ++ + KP
Sbjct: 394 KMRMTG---------------VRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPD 438
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY LLK+ + W I + +M ++ + S Y L LC
Sbjct: 439 IKTYTP--------LLKLCCKRQW----IKVLRFLICHMFRKDITPDFSTYTLLVTWLCR 486
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
NG+ + L +E++ L+ P + TF L+ +D ++
Sbjct: 487 NGKPAQSCLFLEEM-VLKGFAPKKETFD-LVAEKLDKANL 524
Score = 42.7 bits (99), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 50/262 (19%), Positives = 99/262 (37%), Gaps = 28/262 (10%)
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+A+ A M+Q GVV + L LC + A ++++ P E +F
Sbjct: 212 TDAIDAFNKMDQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQELRG--SVPPDESSFNT 269
Query: 438 LIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
L+ +++ + + M++H +P++ T ++++ Y F + E
Sbjct: 270 LVHGWCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNE----- 324
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ G P P+ TY+ ++ A A + + ++ + GC D + + L+
Sbjct: 325 ------MRSKGCP--PNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLI 376
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM------ 610
RAG+ D + G P F ++ A S E A+ ++ M
Sbjct: 377 YILGRAGRLEDANSVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCK 436
Query: 611 ----AYAPF--HITERQWTELF 626
Y P +RQW ++
Sbjct: 437 PDIKTYTPLLKLCCKRQWIKVL 458
>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/413 (20%), Positives = 168/413 (40%), Gaps = 61/413 (14%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
+A + LV+ L +R + V M SG L+KGL G+ +++ L
Sbjct: 131 DAASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFL 190
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
D L K + + F Y+ LL K +EA+R+ + ++ P++ +Y+ +
Sbjct: 191 DR---LMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGG-QPNLVSYNVLLTG 246
Query: 274 LGQVGLLKELVKLIERMRQK---PSKRIKNM------HRKNWDPVLE-----------PD 313
L + G ++E ++L + + K P+ N+ + W+ E P
Sbjct: 247 LCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPS 306
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM---------ESYRRCLL 364
+V YN ++ + + + V ++ KP+A +Y + E+ CL
Sbjct: 307 IVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLD 366
Query: 365 KVL-------------VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
+++ + EGK+ EA + ++++ + Y + CLC G
Sbjct: 367 QMIFGRCSPNEGTFNAIAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGN 426
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 470
A L++ ++ + P T++ LI G + + + IF+ + +DH P+I N
Sbjct: 427 TYPAFLLLYEMTKYGFT-PDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFN 485
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
A++ + ++ + E+FE GYT P E TY+ ++E
Sbjct: 486 ALILGFCKSHRTDLSLEVFEMMIE---KGYT----------PSETTYTILVEG 525
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 165/448 (36%), Gaps = 102/448 (22%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
T+LL L K+ + +A+R+ +M+ C + PD A+Y + L + G + ++L+E+M
Sbjct: 101 TQLLYDLCKSNKMKKAIRVMEMMI-SCGIIPDAASYTFLVNHLCKRGNVGYAMQLVEKME 159
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
D + V YN ++ +L + GL P+A T
Sbjct: 160 ---------------DSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFT 204
Query: 352 YGLAMES-YR--------RCL--------------LKVLVRAFWEEGKINEAVAAVRNME 388
Y +E+ Y+ R L VL+ +EG+I EA+ +N+
Sbjct: 205 YSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLP 264
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
+G Y L LC GRW++A ++ ++ R P +T+ LI S G I
Sbjct: 265 SKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNG-RERSPSIVTYNILIGSLAFHGKI 323
Query: 449 DDCISIFQHMK------------------------------------DHCEPNIGTVNAM 472
+ + + M C PN GT NA
Sbjct: 324 EQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNA- 382
Query: 473 LKVYSRNDMFSKAKELFEET-TRANSSGYTFLSGDGAPL--------------------- 510
+ V +A L + + NSS + + G + L
Sbjct: 383 IAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFLLLYEMTKYGF 442
Query: 511 KPDEYTYSSMLEASAT-AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
PD YTYSS++ +E E ++K + + D L++ ++ + L
Sbjct: 443 TPDSYTYSSLIRGLCIEGMLYEAME-IFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSL 501
Query: 570 HAFDSLLEAGEIPHPLFFTEMLIQAIVQ 597
F+ ++E G P +T +L++ I+
Sbjct: 502 EVFEMMIEKGYTPSETTYT-ILVEGIIH 528
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 62/338 (18%), Positives = 132/338 (39%), Gaps = 47/338 (13%)
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY----- 352
+KN H+ PD+V +L S++ K V + + G+ P AA+Y
Sbjct: 89 VKNGHK--------PDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYTFLVN 140
Query: 353 --------GLAMESYRR----------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
G AM+ + LV+ G +N+++ + + Q+G+V
Sbjct: 141 HLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVP 200
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
A Y L +AM ++++I + + +P +++ L+ G I++ I +
Sbjct: 201 NAFTYSSLLEAAYKERGVNEAMRLLDEIIA-KGGQPNLVSYNVLLTGLCKEGRIEEAIRL 259
Query: 455 FQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 513
F+++ PN+ + N +L+ + +A EL E +G P
Sbjct: 260 FKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEM-------------NGRERSPS 306
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
TY+ ++ + A + E V M + + T + ++ + GK + + D
Sbjct: 307 IVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLD 366
Query: 574 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
++ P+ F + + + ++A +LI ++
Sbjct: 367 QMIFGRCSPNEGTFNAIAVLC-YEGKVQEAFSLIQSLG 403
>gi|255577248|ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531022|gb|EEF32875.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 808
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 30/262 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT LL+ G++ +P +A +FN+M + L P++ +++++ G GLL + VK++ M
Sbjct: 393 YTSLLSSYGRSKQPKKAREMFNMM-KKAKLKPNVVSFNALIDAYGSNGLLADAVKVLREM 451
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q + P++V +L AC Q + V + G+K +
Sbjct: 452 EQDG---------------IHPNIVTICTLLAACGRCGQKVNIDAVLSAAKMRGIKLNTV 496
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
A+ SY G+ +AVA +M + V + Y L C
Sbjct: 497 ACNSAIGSYMNV------------GEYEKAVALYNSMRKMKVAPNSVTYTVLISGCCKMS 544
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTV 469
++ A+ + L+ + E+ + +I + G I + SIF MK C P+I T
Sbjct: 545 KYGKAIEFFADMMELKIALTKEVC-SSVICAYSKQGQITEAESIFTMMKMAGCCPDIITF 603
Query: 470 NAMLKVYSRNDMFSKAKELFEE 491
AML Y+ + + KA +L +E
Sbjct: 604 TAMLHAYNAGEHWGKACDLIQE 625
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/453 (20%), Positives = 186/453 (41%), Gaps = 66/453 (14%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHE 246
F +L+K + +G+ + V W +K +++ +R +Y ++ + + +
Sbjct: 105 FARKNFPRLIKEITQRGALEHSNLVFRW---MKLQKNYCARTDMYNMMIRLHARHNLTDQ 161
Query: 247 ALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
A +F M E C PD Y+++ G+ G + + ++E M ++
Sbjct: 162 ARGLFFEMQEWRCK--PDSETYNALINAHGRAGQWRWAMNIMEDMLRE------------ 207
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
+ P YN ++NAC S W+ V KQ+ ++G+ P T+ + + +Y+
Sbjct: 208 ---AIPPSRSTYNNLINACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYK----- 259
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+ ++A++ M+ + + + CL G+ + A+ + ++
Sbjct: 260 -------TGAQYSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIFNSMREK 312
Query: 426 R-HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFS 483
R +P +TFT +I G +++C ++F M + P I + NA++ Y+ + M
Sbjct: 313 RAECRPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSE 372
Query: 484 KAKELFEETTRA----NSSGYT-FLSGDG-----------------APLKPDEYTYSSML 521
+A +F++ + + YT LS G A LKP+ ++++++
Sbjct: 373 EALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALI 432
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
+A + V + M G + LL R G+ + D++L A ++
Sbjct: 433 DAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAACGRCGQ----KVNIDAVLSAAKM 488
Query: 582 PHPLFFTEMLIQAIVQ----SNYEKAVALINAM 610
T AI YEKAVAL N+M
Sbjct: 489 RGIKLNTVACNSAIGSYMNVGEYEKAVALYNSM 521
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 129/326 (39%), Gaps = 56/326 (17%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+T ++ + +G+ +F+ ML + L P I +Y+++ G+ +E + + ++
Sbjct: 322 TFTSIIHLYSLSGQVENCKAVFSTMLAE-GLTPTIVSYNALIGAYAFHGMSEEALSVFKK 380
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
++ L PD+V Y ++L++ S Q K +F ++K+ LKP+
Sbjct: 381 IKASG---------------LLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNV 425
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACCLC 407
++ L+ A+ G + +AV +R MEQ G+ L AC C
Sbjct: 426 VSF------------NALIDAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAACGRC 473
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
DA+L K++ ++ + + I S M+ G + ++++ M K PN
Sbjct: 474 GQKVNIDAVLSAAKMRGIKLN---TVACNSAIGSYMNVGEYEKAVALYNSMRKMKVAPNS 530
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEE--------TTRANSSGYTFLSGDG----------- 507
T ++ + + KA E F + T SS S G
Sbjct: 531 VTYTVLISGCCKMSKYGKAIEFFADMMELKIALTKEVCSSVICAYSKQGQITEAESIFTM 590
Query: 508 ---APLKPDEYTYSSMLEASATAHQW 530
A PD T+++ML A W
Sbjct: 591 MKMAGCCPDIITFTAMLHAYNAGEHW 616
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/475 (19%), Positives = 190/475 (40%), Gaps = 57/475 (12%)
Query: 162 VDRLSEREMTAKNWKFVR-IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
V + +R M W+ V ++N F L++ L +G ++V W +K
Sbjct: 78 VSEVVDRLMALNRWEEVDGVLNSWVGRFARKNFPVLIRELSRRGCIELCVNVFKW---MK 134
Query: 221 DKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+++ +R +Y ++ + + +A +F ++ + PD Y ++ G+ G
Sbjct: 135 SQKNYCARNDIYNMMIRLHARHNWVDQARGLF-FEMQKWSCKPDAETYDALINAHGRAGQ 193
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ + L++ M + + P YN ++NAC S W+ V K+
Sbjct: 194 WRWAMNLMDDMLR---------------AAIAPSRSTYNNLINACGSSGNWRQALEVCKK 238
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ +G+ P T+ + + +Y+ + ++A++ M+ V + +
Sbjct: 239 MTDNGVGPDLVTHNIVLSAYK------------SGRQYSKALSYFELMKGAKVRPDTTTF 286
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLR-HSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
+ CL G+ A+ V ++ R +P +TFT ++ G I++C ++F+ M
Sbjct: 287 NIIIYCLSKLGQSSQALDVFNSMRDKRAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAM 346
Query: 459 -KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR-------------ANSSGYTFLS 504
+ +PNI + NA++ Y+ + M A +F + R NS G +
Sbjct: 347 LAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQP 406
Query: 505 GDGAPL---------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
G + KP+ TY+++++A + +++ M G + + L
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGTKPNVVSVCTL 466
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L SR+ K +E + G + + + I + EKA+AL M
Sbjct: 467 LAACSRSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQTM 521
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 131/295 (44%), Gaps = 45/295 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT LL G++ +P +A +F LM+ P++ Y+++ G G L E V++ +M
Sbjct: 393 YTSLLNSYGRSRQPGKAKEVF-LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 451
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q +K P++V +L AC S + V V + G+ + A
Sbjct: 452 EQDGTK---------------PNVVSVCTLLAACSRSKKKVNVETVLSAAQSRGINLNTA 496
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
Y A+ SY ++ +A+A + M ++ V + + L C
Sbjct: 497 AYNSAIGSY------------INAAELEKAIALYQTMRKKKVKADSVTFTILISGSCRMS 544
Query: 411 RWQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGT 468
++ +A+ +++++ L S PL + ++ ++ + G + + SIF MK C+P++
Sbjct: 545 KYPEAISYLKEMEDL--SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIA 602
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+ML Y+ ++ + KA ELF E + +G ++PD S+++ A
Sbjct: 603 YTSMLHAYNASEKWGKACELFLE-----------MEANG--IEPDSIACSALMRA 644
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 107/503 (21%), Positives = 187/503 (37%), Gaps = 104/503 (20%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH-EALRIFNLM 254
L+ G G+WRQA+ V + DL V ++ K+GR + +AL F LM
Sbjct: 219 LINACGSSGNWRQALEVCKKMTDNGVGPDL----VTHNIVLSAYKSGRQYSKALSYFELM 274
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK---------RIKNMHR-- 303
+ + PD ++ + L ++G + + + MR K ++ I +++
Sbjct: 275 -KGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPDVVTFTSIMHLYSVR 333
Query: 304 ---KNWDPVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+N V E P++V YNA++ A + VF ++++G+ P +Y
Sbjct: 334 GEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSY 393
Query: 353 GLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+ SY R L+ A+ G + EAV R MEQ
Sbjct: 394 TSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 390 RGV-VGTASVYYELACC----------------------------------LCNNGRWQD 414
G SV LA C N +
Sbjct: 454 DGTKPNVVSVCTLLAACSRSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEK 513
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV-NAML 473
A+ + + ++ + K +TFT LI S + IS + M+D P V +++L
Sbjct: 514 AIALYQTMRK-KKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 572
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
YS+ ++A+ +F + A KPD Y+SML A + +W
Sbjct: 573 CAYSKQGQVTEAESIFNQMKMAGC-------------KPDVIAYTSMLHAYNASEKWGKA 619
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP-LFFTEMLI 592
++ M +G + D + L+ ++ G+ + D L+ E+P F E+
Sbjct: 620 CELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD-LMREKEVPFTGAVFFEIFS 678
Query: 593 QAIVQSNYEKAVALINAM-AYAP 614
+++A+ LI M Y P
Sbjct: 679 ACNTLQEWKRAIDLIQMMDPYLP 701
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 156/378 (41%), Gaps = 55/378 (14%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ L ++ T K + +R+M Q ++ G A S+L+ +K
Sbjct: 184 VMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNE---MK 240
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
K F Y+ L+ L K + E +R L + N+YP++ ++SV L + G +
Sbjct: 241 QKSIPPDIFTYSTLIDALCKLSQ-WENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299
Query: 281 KELVKLIERMRQK---PSKRIKNM-------------HRKNWDPVL----EPDLVVYNAV 320
++ +++ M +K P NM R+ +D ++ EPD++ YN +
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNIL 359
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES---------------------- 358
+N + V +++ + GLKPS T + +
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419
Query: 359 ----YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
Y C L+ +++ G + EA++ +E+R +Y + LC NG+
Sbjct: 420 IPDLYTHC---TLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDK 476
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 473
A EK+ L P IT+T +I G +D+ + + M+D+ C + T N ++
Sbjct: 477 AHATFEKL-PLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIV 535
Query: 474 KVYSRNDMFSKAKELFEE 491
+ + R++ S+ K EE
Sbjct: 536 RGFLRSNKVSEMKAFLEE 553
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 139/325 (42%), Gaps = 40/325 (12%)
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
K + R+N + EP+ V+Y V+N C H K F + + + + KP+ TY
Sbjct: 166 KKLVREN---ICEPNEVMYGTVMNGLCKKGHTQKA-FDLLRLMEQGSTKPNTRTY----- 216
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
+++ AF ++G ++ A + + M+Q+ + Y L LC +W++
Sbjct: 217 -------TIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRT 269
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 476
+ ++ L + P TF +I G ++D I ++M + +P++ T N ++ Y
Sbjct: 270 LFLEMIHL-NIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGY 328
Query: 477 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
+A+E+F+ + N S ++PD +Y+ ++ A + + V
Sbjct: 329 GLRGQVDRAREIFD--SMINKS-----------IEPDIISYNILINGYARQKKIDEAMQV 375
Query: 537 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 596
+ ++ G + LL G+ ++ FD +L AG IP ++ +
Sbjct: 376 CREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIP------DLYTHCTL 429
Query: 597 QSNYEKAVALINAMAYAPFHITERQ 621
Y K + AM++ FH ER+
Sbjct: 430 LGGYFKNGLVEEAMSH--FHKLERR 452
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 126/282 (44%), Gaps = 26/282 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
LEPD+V+YN ++ + + + F +++ +GL TY ++ VL +
Sbjct: 266 LEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTY--------TSMIGVLCK 317
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
A ++NEAV +M+Q V A Y + G+++DA ++E+ + +
Sbjct: 318 A----DRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRR-KGCI 372
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
P +++ ++ G +D+ + F+ MK PN+ T N M+ DM KA +L
Sbjct: 373 PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMI------DMLCKAGKL- 425
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
ET A L P+ T + M++ A + + +++G+ C+ D
Sbjct: 426 -ETALVVRDAM-----KDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDA 479
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ R G+ ++ +L+A +IP+ + +T ++
Sbjct: 480 VTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 161/410 (39%), Gaps = 63/410 (15%)
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
GL K Y L+ LG+ GR EA +++ ML D N P+ Y S+ +
Sbjct: 469 GLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQML-DANQIPNAVVYTSLIRNFFKC 527
Query: 278 GLLKELVKLIERMRQKPSKRIKN-MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G R++ +I N M R PDL++ N ++ + + + +
Sbjct: 528 G------------RKEDGHKIYNEMLRLGC----SPDLLLLNTYMDCVFKAGEIEKGRAL 571
Query: 337 FKQLRKSGLKPSAATY----------GLAMESY--------RRCLL-----KVLVRAFWE 373
F++++ G P A +Y G A E+Y + C+L ++ F +
Sbjct: 572 FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCK 631
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE- 432
GK+N+A + M+ +G T Y + L R +A ++ E+ K SK +E
Sbjct: 632 SGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK----SKGIEL 687
Query: 433 --ITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+ ++ LI G ID+ I + M+ PN+ T N +L D KA+E+
Sbjct: 688 NVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL------DALVKAEEIS 741
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
E F S P+ TYS ++ ++ ++ M G + +
Sbjct: 742 EALV-------CFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNV 794
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
+ ++ ++AG + F+ E G + + +I+ + +N
Sbjct: 795 FTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNA-IIEGLSNAN 843
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 128/293 (43%), Gaps = 37/293 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT L+ L KAG HEA +F M E C L D AY++V + G + + +L+E
Sbjct: 587 YTILIHGLVKAGFAHEAYELFYTMKEQGCVL--DTRAYNTVIDGFCKSGKVNKAYQLLEE 644
Query: 290 MRQKPSKRIKNMHRKNWDPV--------------------LEPDLVVYNAVLNACVPSHQ 329
M+ K + + D + +E ++V+Y+++++ +
Sbjct: 645 MKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGR 704
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+ + ++L + GL P+ T+ CLL LV+A EE I+EA+ ++M+
Sbjct: 705 IDEAYLIMEELMQKGLTPNVYTW--------NCLLDALVKA--EE--ISEALVCFQSMKD 752
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
Y L LC ++ A + ++++ + KP T+T +I G+I
Sbjct: 753 LKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQK-QGFKPNVFTYTTMISGLAKAGNIV 811
Query: 450 DCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
+ ++F+ K+ + NA+++ S + S A LFEE S YT
Sbjct: 812 EADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYT 864
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 133/331 (40%), Gaps = 42/331 (12%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD + ++ L E V LI+RM Q+ +PDLV Y AV+
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGC---------------QPDLVTYGAVV 225
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
N + ++ + ++ + Y ++S L + E+ +A+
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS--------LCKYRHED----DAL 273
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
ME +GV Y L CLCN GRW DA ++ + R P +TF+ LI +
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE-RKINPNLVTFSALIDA 332
Query: 442 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
+ G + +++ M K +PNI T ++++ + D +AK++ E R +
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDC--- 389
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
P+ TY++++ A + + +++ M+ G + + L+
Sbjct: 390 ----------LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFF 439
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+A C + F ++ G P+ L + +L
Sbjct: 440 QARDCDNAQMVFKQMVSVGVHPNILTYNILL 470
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 140/337 (41%), Gaps = 46/337 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL +G A+++L+ + K + ++ +Y+ ++ L K +AL +F M
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANV---VIYSTVIDSLCKYRHEDDALNLFTEM- 279
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ + P++ Y S+ L G + +L+ M + RK + P+LV
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM----------IERK-----INPNLV 324
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
++A+++A V + +++++ K + P+ TY L+ F
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY------------SSLINGFCMLD 372
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
++ EA + M ++ + Y L C R M + ++ S R +T+
Sbjct: 373 RLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM-SQRGLVGNTVTY 431
Query: 436 TGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
T LI D+ +F+ M PNI T N +L +N +KA +FE R
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 491
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
+ ++PD YTY+ M+E A +W+
Sbjct: 492 ST-------------MEPDIYTYNIMIEGMCKAGKWK 515
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 103/251 (41%), Gaps = 16/251 (6%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
EPD+V N++LN ++ + Q+ + G KP T+ L+
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTF------------TTLIHG 192
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ K +EAVA + M QRG Y + LC G A+ ++ K+++ +
Sbjct: 193 LFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEAN 252
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+ I ++ +I S H DD +++F M++ PN+ T ++++ +S A L
Sbjct: 253 VVI-YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL 311
Query: 490 EETT--RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
+ + N + TF + A +K + + L + + Y + C L
Sbjct: 312 SDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCML 371
Query: 548 DQTKHAWLLVE 558
D+ A ++E
Sbjct: 372 DRLGEAKQMLE 382
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/394 (19%), Positives = 166/394 (42%), Gaps = 55/394 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + ++ +L K G+ +A + F +E+ + P++ Y++V G ++ +++
Sbjct: 237 YTFNIMINVLCKEGKLKKA-KDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLD 295
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M+ + +EPD Y ++++ + + + +++++ GL P+
Sbjct: 296 IMKNRG---------------VEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPT 340
Query: 349 AATYGLAMESY-----------------RRCLL------KVLVRAFWEEGKINEAVAAVR 385
A TY ++ Y RR +L +L+ A + EGK++EA ++
Sbjct: 341 AVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIK 400
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
+M G+V + Y L C G + A + +++ S + +P +T+T LI
Sbjct: 401 DMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMIS-KGIQPTLVTYTSLIYVLSKR 459
Query: 446 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+ +F+ + ++ P++ NA++ + N +A L +E + N
Sbjct: 460 NRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRN-------- 511
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+ PDE TY+++++ + E + K M G + D + L+ S+ G
Sbjct: 512 -----IVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGD 566
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
+ D +L G P L + LIQ + ++
Sbjct: 567 INDAFTIRDEMLSIGFNPTLLTYNA-LIQGLCKN 599
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 132/322 (40%), Gaps = 36/322 (11%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P + +NA+L+ + +Q + V+ ++ ++ + +K + T+ +++
Sbjct: 199 PKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTF------------NIMINVL 246
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+EGK+ +A + +ME GV Y + C+ GR + A +V++ +K+ R +P
Sbjct: 247 CKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKN-RGVEPD 305
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVY-SRNDM---FSKAK 486
T+ LI GG +++ I + MK+ P T N ++ Y ++ D+ F
Sbjct: 306 SYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRD 365
Query: 487 ELFEETTRANSSGYT------FLSG-----DG-------APLKPDEYTYSSMLEASATAH 528
E+ S Y FL G DG + + PD TY+ ++
Sbjct: 366 EMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCG 425
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ ++ M G Q + L+ S+ + + F+ ++ G P + F
Sbjct: 426 NAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFN 485
Query: 589 EMLIQAIVQSNYEKAVALINAM 610
++ N ++A AL+ M
Sbjct: 486 ALIDGHCANGNLDRAFALLKEM 507
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 127/341 (37%), Gaps = 100/341 (29%)
Query: 187 MFTEGQMLK---LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGR 243
+F EG+M + ++K +GD G +++ Y L+ + G
Sbjct: 386 LFLEGKMDEADGMIKDMGDSGIVPDSIT-------------------YNILINGYCRCGN 426
Query: 244 PHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR 303
+A + + M+ + P + Y S+ L + +K L E++ ++ +
Sbjct: 427 AKKAFNLHDEMISK-GIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGA-------- 477
Query: 304 KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCL 363
PDL+++NA+++ + F + K++ K + P TY M+ RC
Sbjct: 478 -------SPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQG--RC- 527
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
EGK+ EA ++ M++RG+
Sbjct: 528 ---------REGKVEEARELLKEMKRRGI------------------------------- 547
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMF 482
+P I++ LI G I+D +I M P + T NA+++ +N
Sbjct: 548 -----RPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQG 602
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
A+EL +E S G T PD+ TY S++E
Sbjct: 603 DLAEELLKEMV---SKGIT----------PDDSTYFSLIEG 630
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 145/335 (43%), Gaps = 44/335 (13%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+VDRL + + + M +G++ T L+ GL + G W++A +L+ + G
Sbjct: 237 IVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGN 296
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
DL + ++ L+ I+ K G EA I M E + PD+A Y+++ + L
Sbjct: 297 IMPDLVA---FSVLIDIMCKEGEVSEARVILKTMTE-MGVEPDVATYNTL---MNGYCLR 349
Query: 281 KELV---KLIERMRQK-----------------PSKRI---KNMHRKNWDPVLEPDLVVY 317
E+V K+ E M K +KRI K + + L PD V Y
Sbjct: 350 MEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSY 409
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N +++ + + +FK + +G P+ TY + ++ CL K +G +
Sbjct: 410 NTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLD----CLSK--------QGYL 457
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
++A+ R ME G+ Y + +C G+++DA + ++ S++ +P T
Sbjct: 458 DQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAEL-SVKGLQPNNWVCTP 516
Query: 438 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 471
I GG +D+ F+ M KD C P G +N
Sbjct: 517 TIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCING 551
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 141/354 (39%), Gaps = 57/354 (16%)
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
I GK GR A+ +F++M+ P++ +Y + L +VG E++KL+E M+
Sbjct: 171 FCIEGKIGR---AIELFDVMVAR-GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVG 226
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
EPD+V+YN +++ +F +++ +G+ P+ TY
Sbjct: 227 C---------------EPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTS 271
Query: 355 AMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
+ R VL+ +EG+++EA ++ M + G
Sbjct: 272 LIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMG 331
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
V + Y L C +A V E + S + P +F+ L+ ID+
Sbjct: 332 VEPDVATYNTLMNGYCLRMEVVEARKVFEVMIS-KGRMPDVFSFSILVNGYCKAKRIDEA 390
Query: 452 ISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 510
+F M P+ + N ++ + +A+ELF++ +S+GY
Sbjct: 391 KQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD---MHSNGY---------- 437
Query: 511 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
P+ TYS +L+ + + +++ M SG + D + ++ + GK
Sbjct: 438 PPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGK 491
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/410 (19%), Positives = 165/410 (40%), Gaps = 49/410 (11%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
F ++M+QSG + E + G A S L G + ++ + Y LL
Sbjct: 131 FDQMMDQSGYL-PEAGFFSFVAGSCTNAGLLDAASTL-LTKGSRLGCCIEP-YAYNYLLN 187
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
L GR +A+ +F ++D PD+ +++ V + ++G ++ ++L+ERM +
Sbjct: 188 SLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFGC- 246
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL-KPSAATYGLA 355
PD + +N +++ + Q V ++L++ G+ P+A TY
Sbjct: 247 --------------SPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTY--- 289
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
++ + + GK+ +A++ +M + G Y L + G+ D
Sbjct: 290 ---------TSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVL---INGYGKALDM 337
Query: 416 MLVVEKIKSL--RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAM 472
V + L RH P +TF+ LI G +DD I++ M H +PN+ T + +
Sbjct: 338 ESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSII 397
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
+ + + ++A ++ E + P + Y+ +++ + +
Sbjct: 398 IHSLCKQNRSAEALDILRELNMRTD------------IAPQTFIYNPVIDILCKGGKVDE 445
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ M GC D+ + L++ G+ F ++EAG P
Sbjct: 446 ANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCRP 495
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 126/282 (44%), Gaps = 26/282 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
LEPD+V+YN ++ + + + F +++ +GL TY ++ VL +
Sbjct: 266 LEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTY--------TSMIGVLCK 317
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
A ++NEAV +M+Q V A Y + G+++DA ++E+ + +
Sbjct: 318 A----DRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRR-KGCI 372
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
P +++ ++ G +D+ + F+ MK PN+ T N M+ DM KA +L
Sbjct: 373 PSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMI------DMLCKAGKL- 425
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
ET A L P+ T + M++ A + + +++G+ C+ D
Sbjct: 426 -ETALVVRDAM-----KDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDA 479
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ R G+ ++ +L+A +IP+ + +T ++
Sbjct: 480 VTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 161/410 (39%), Gaps = 63/410 (15%)
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
GL K Y L+ LG+ GR EA +++ ML D N P+ Y S+ +
Sbjct: 469 GLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQML-DANQIPNAVVYTSLIRNFFKC 527
Query: 278 GLLKELVKLIERMRQKPSKRIKN-MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G R++ +I N M R PDL++ N ++ + + + +
Sbjct: 528 G------------RKEDGHKIYNEMLRLGC----SPDLLLLNTYMDCVFKAGEIEKGRAL 571
Query: 337 FKQLRKSGLKPSAATY----------GLAMESY--------RRCLL-----KVLVRAFWE 373
F++++ G P A +Y G A E+Y + C+L ++ F +
Sbjct: 572 FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCK 631
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE- 432
GK+N+A + M+ +G T Y + L R +A ++ E+ K SK +E
Sbjct: 632 SGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK----SKGIEL 687
Query: 433 --ITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+ ++ LI G ID+ I + M+ PN+ T N +L D KA+E+
Sbjct: 688 NVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL------DALVKAEEIS 741
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
E F S P+ TYS ++ ++ ++ M G + +
Sbjct: 742 EALV-------CFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNV 794
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
+ ++ ++AG + F+ E G + + +I+ + +N
Sbjct: 795 FTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNA-IIEGLSNAN 843
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 128/293 (43%), Gaps = 37/293 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT L+ L KAG HEA +F M E C L D AY++V + G + + +L+E
Sbjct: 587 YTILIHGLVKAGFAHEAYELFYTMKEQGCVL--DTRAYNTVIDGFCKSGKVNKAYQLLEE 644
Query: 290 MRQKPSKRIKNMHRKNWDPV--------------------LEPDLVVYNAVLNACVPSHQ 329
M+ K + + D + +E ++V+Y+++++ +
Sbjct: 645 MKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGR 704
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+ + ++L + GL P+ T+ CLL LV+A EE I+EA+ ++M+
Sbjct: 705 IDEAYLIMEELMQKGLTPNVYTW--------NCLLDALVKA--EE--ISEALVCFQSMKD 752
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
Y L LC ++ A + ++++ + KP T+T +I G+I
Sbjct: 753 LKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQK-QGFKPNVFTYTTMISGLAKAGNIV 811
Query: 450 DCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
+ ++F+ K+ + NA+++ S + S A LFEE S YT
Sbjct: 812 EADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYT 864
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 158/379 (41%), Gaps = 58/379 (15%)
Query: 187 MFTEGQMLKLL-KGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH 245
MF +G +L GL G R +S+ + LK K + + + LL L K G+
Sbjct: 295 MFPDGFTYSILFDGLTRTGESRTMLSL--FAESLK-KGVMLGAYTCSILLNGLCKDGKVA 351
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
+A ++ ML L P Y+++ QV L+ + E+M+ S+ I+
Sbjct: 352 KAEQVLE-MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMK---SRHIR------ 401
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY------ 359
PD + YNA++N + ++ KSG+ PS T+ +++Y
Sbjct: 402 ------PDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 455
Query: 360 RRCLLKV-----------------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
+C + +V+AF + GKI EAVA + +M + V A VY +
Sbjct: 456 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 515
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH- 461
+G + A L+VEK+K+ S + +T+ L+ ID+ + +++
Sbjct: 516 IDAYIESGDTEQAFLLVEKMKNSGVSASI-VTYNLLLKGLCRSSQIDEAEELIYTLRNQG 574
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
P++ + N ++ KA EL +E + ++P TY +++
Sbjct: 575 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG-------------IRPTLRTYHTLV 621
Query: 522 EASATAHQWEYFEYVYKGM 540
A A+A + E +Y+ M
Sbjct: 622 SALASAGRVHDMECLYQQM 640
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/405 (19%), Positives = 152/405 (37%), Gaps = 87/405 (21%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++A L ++G+ +AL++F+ M+ D + P+ Y+++ + G L+ +L +
Sbjct: 195 FSYNVVIAGLWRSGKGSDALKVFDEMV-DMGVVPNWITYNTMIDGHVKGGDLEAGFRLRD 253
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M K P++V YN +L+ + + + ++ + P
Sbjct: 254 QMLHDGPK---------------PNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298
Query: 349 AATY-----GLAMESYRRCLL------------------KVLVRAFWEEGKINEAVAAVR 385
TY GL R +L +L+ ++GK+ +A +
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 358
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
+ G+V T +Y L C + A + E++KS RH +P IT+ LI
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS-RHIRPDHITYNALI------ 411
Query: 446 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
N + K+ +M +KA++L E ++
Sbjct: 412 ------------------------NGLCKL----EMVTKAEDLVMEMEKSG--------- 434
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
+ P T++++++A TA Q E V M G + D ++ + GK
Sbjct: 435 ----VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 490
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
D ++ P+ + ++ I + E+A L+ M
Sbjct: 491 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 535
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 160/427 (37%), Gaps = 60/427 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
LLK L D+G QA +L + G D+ + Y ++ K G ++A +F
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA---YNTVIDGFFKEGDVNKACDLFKE 244
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M++ + PD Y SV L + + + + +M K + NW
Sbjct: 245 MVQR-GIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK------GVLPNNW------- 290
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
YN ++ + QWK VFK++R+ + P T+ + M S +
Sbjct: 291 --TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGS------------LCK 336
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVY------YELACCLCNNGRWQDAMLVVEKIKSLRH 427
GKI EA M +G Y Y CL + D ML
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG-------DG 389
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 486
P+ TF LI + + G +D + IF M+DH +PN+ T ++ R A
Sbjct: 390 IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAM 449
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
E F + + PD+Y Y +++ T + + + +G
Sbjct: 450 EKFNQMIDQG-------------VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
LD + ++ + G+ ++ FD + G P + ++ ++ + EKA+ +
Sbjct: 497 LDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556
Query: 607 INAMAYA 613
+AM A
Sbjct: 557 FDAMVSA 563
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 164/411 (39%), Gaps = 75/411 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K + G +AM + + ++D + YT ++A L + G+ +A+ FN M+
Sbjct: 400 LIKAYANCGMLDKAMIIFNE---MRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMI 456
Query: 256 EDCNLYPDIAAYHSVA---VTLGQVGLLKELVK------------LIERMRQKPSKRIKN 300
D + PD AYH + T G + KEL+ L + K +
Sbjct: 457 -DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRV 515
Query: 301 MHRKNW-----DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
M +N + L P VVY+ +++ + + VF + +G++P+ YG
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYG-- 573
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
LV + + G+I+E ++ R M Q+G+ + +Y + +G ++
Sbjct: 574 ----------TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIII-----DGLFEAG 618
Query: 416 MLVVEKIKSLRHSKPL----EITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 470
V K+K ++ + T++ ++ D+ I +F+ ++ + + +I T+N
Sbjct: 619 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 678
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
M+ + +AK+LF +R+ L P TYS M+
Sbjct: 679 TMIAGMFQTRRVEEAKDLFASISRSG-------------LVPCVVTYSIMITNLIKEGLV 725
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
E E ++ M +GC+ D LL H LL+ EI
Sbjct: 726 EEAEDMFSSMQNAGCEPDS----------------RLLNHVVRELLKKNEI 760
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 91/491 (18%), Positives = 179/491 (36%), Gaps = 76/491 (15%)
Query: 125 NWVLDD-----DVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVR 179
N V+D DV D F + V+ + + + + L R M K F+R
Sbjct: 223 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALC---KARAMD-KAEAFLR 278
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILG 239
M G++ L+ G G W++A+ V ++ + L + L+ L
Sbjct: 279 QMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKE---MRRQSILPDVVTFNMLMGSLC 335
Query: 240 KAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
K G+ EA +F+ M ++ N PD+ +Y+ + G L ++ L + M
Sbjct: 336 KYGKIKEARDVFDTMAMKGQN--PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG---- 389
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
+ P + +N ++ A +F ++R G+KP+ TY
Sbjct: 390 -----------IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTY------ 432
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
++ A GK+++A+ M +GV Y+ L C +G A +
Sbjct: 433 ------TTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486
Query: 419 VEKIKSLRHSKPLEIT-FTGLIISSMDGGHIDDCISIFQ-HMKDHCEPNIGTVNAMLKVY 476
+ +I + + L+I F+ +I + G + D +IF + P + ++ Y
Sbjct: 487 ISEI--MNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGY 544
Query: 477 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
KA +F+ A ++P++ Y +++ + + +
Sbjct: 545 CLVGKMEKALRVFDAMVSAG-------------IEPNDVVYGTLVNGYCKIGRIDEGLSL 591
Query: 537 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE-IPHPLFFTEMLIQAI 595
++ M G + + ++ D L EAG +P + F EM I
Sbjct: 592 FREMLQKGIKPSTILYNIII----------------DGLFEAGRTVPAKVKFHEMTESGI 635
Query: 596 VQSNYEKAVAL 606
+ ++ L
Sbjct: 636 AMNKCTYSIVL 646
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 53/292 (18%), Positives = 107/292 (36%), Gaps = 28/292 (9%)
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
R VL P Y +++ C +H+ + F QL ++GL+
Sbjct: 100 RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDII------------ 147
Query: 363 LLKVLVRAFWEEGKINEAV-AAVRNMEQRGVVGTASVYYELACCLCNNGR-WQDAMLVVE 420
+ L++ F E + +EA+ + + G V Y L LC+ G+ Q L+
Sbjct: 148 IANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRM 207
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 479
+ P + + +I G ++ +F+ M + P+ T ++++ +
Sbjct: 208 MAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKA 267
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
KA+ + + P+ +TY++++ ++ QW+ V+K
Sbjct: 268 RAMDKAEAFLRQMVNKG-------------VLPNNWTYNNLIYGYSSTGQWKEAVRVFKE 314
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
M D L+ + GK FD++ G+ P + ML
Sbjct: 315 MRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 366
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 154/379 (40%), Gaps = 57/379 (15%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+ +R ++ K+ + GL+ G +L G+ + L +
Sbjct: 99 ILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREA 158
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K D + Y+ L+ + GKAGR +A F L+ PD AY+++ +VG+
Sbjct: 159 GIKPD---QVAYSILIDMFGKAGRHEDAAATFR-ELQMSGYLPDSVAYNTLIHAFAKVGM 214
Query: 280 LKELVKLIE------------------------RMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + + + RM + +K M L+P+ +
Sbjct: 215 VDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIG----LQPNEL 270
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY---------------- 359
Y +VLNA + ++Q G +F+++++S + +TY + Y
Sbjct: 271 GYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKM 330
Query: 360 -----RRCLL--KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
RR ++ L+ + + GK+ EA M+Q+G G VY + GR
Sbjct: 331 RQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRI 390
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNA 471
DA ++ ++K + P +T+T LI + G ++CI +F QH D + + V
Sbjct: 391 NDAERLMAELKDSKLV-PDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAI 449
Query: 472 MLKVYSRNDMFSKAKELFE 490
M+ VY + +SK EL E
Sbjct: 450 MINVYGKARQYSKLAELLE 468
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/363 (19%), Positives = 147/363 (40%), Gaps = 43/363 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y L+ GK G +A++ F+ L+D L PD Y +V +VG + + + ++
Sbjct: 96 IYNILILEYGKRGNFSQAMKYFS-QLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKE 154
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
MR+ K PD V Y+ +++ + + + F++L+ SG P +
Sbjct: 155 MREAGIK---------------PDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDS 199
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
Y L+ AF + G +++A + ++ + ++Y +
Sbjct: 200 VAY------------NTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYA-K 246
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 468
R D L V K+ +P E+ + ++ + M I +F+ M++ +C T
Sbjct: 247 ARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGEST 306
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
ML VYS+ S A+EL + + + + YS++++
Sbjct: 307 YITMLNVYSKAGFHSAAEELLAKMRQLG-------------FRRNVVAYSTLIDMYGKVG 353
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ + ++ M GC+ + + +L +AG+ + E L ++ +P + +T
Sbjct: 354 KLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYT 413
Query: 589 EML 591
++
Sbjct: 414 TLI 416
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%), Gaps = 17/196 (8%)
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS-SMDGGHIDDCISIFQ 456
+Y A CL +W ++V+++ + + P +I F L+I +++ G F
Sbjct: 26 LYVAFAHCLMRVQKWVALEILVDEM--IGKNCPPDIKFYALVIKEAINTGRFQTAQHWFS 83
Query: 457 HMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
MK C P+I N ++ Y + FS+A + F + L +G L PD
Sbjct: 84 KMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQ-----------LKDEG--LLPDSG 130
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
TY ++L A + K M +G + DQ ++ L+ +AG+ F L
Sbjct: 131 TYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFREL 190
Query: 576 LEAGEIPHPLFFTEML 591
+G +P + + ++
Sbjct: 191 QMSGYLPDSVAYNTLI 206
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 105/253 (41%), Gaps = 36/253 (14%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M +S F E + +L G A +L + L +R++ + Y+ L+ + GK
Sbjct: 295 MQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVA---YSTLIDMYGK 351
Query: 241 AGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
G+ EA R+F+ M + C ++ Y+++ G+ G + + +L+ ++
Sbjct: 352 VGKLQEATRLFSTMKQQGCK--GNLIVYNTMLDMYGKAGRINDAERLMAELK-------- 401
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
D L PD V Y ++NA +++ VF+Q R GLK
Sbjct: 402 -------DSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLD----------- 443
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
R L+ +++ + + + ++ + M + G+ + + + G ++A ++
Sbjct: 444 -RILVAIMINVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAELL 502
Query: 420 EKIKSLRHSKPLE 432
KI L PLE
Sbjct: 503 RKINEL---GPLE 512
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 163/377 (43%), Gaps = 48/377 (12%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILG 239
M + G+ E L+ + G W A VL + + D++ + FV+++LLA
Sbjct: 336 MEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEM----EAGDVQPNSFVFSRLLAGFR 391
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
G + ++ M + + PD Y+ V T G+ L + +RM +
Sbjct: 392 DRGEWQKTFQVLKEM-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG----- 445
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+EPD V +N +++ + +F+ + + G P A TY + + SY
Sbjct: 446 ----------IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY 495
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
+ W++ K + M+ +G++ + L +GR+ DA+ +
Sbjct: 496 GD-------QERWDDMK-----RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 543
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 478
E++KS+ KP + LI + G + ++ F+ M D +P++ +N+++ +
Sbjct: 544 EEMKSV-GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE 602
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
+ ++A + + ++ +G +KPD TY+++++A +++ VY+
Sbjct: 603 DRRDAEAFAVLQ-----------YMKENG--VKPDVVTYTTLMKALIRVDKFQKVPVVYE 649
Query: 539 GMALSGCQLDQTKHAWL 555
M +SGC+ D+ + L
Sbjct: 650 EMIMSGCKPDRKARSML 666
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 152/395 (38%), Gaps = 48/395 (12%)
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+DK +L + V ++ K+G P +AL++ M + L A S+ L G
Sbjct: 233 RDKLELDVQLVNDIIMG-FAKSGDPSKALQLLG-MAQATGLSAKTATLVSIISALADSGR 290
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
E L E +RQ ++P YNA+L V + K + +
Sbjct: 291 TLEAEALFEELRQSG---------------IKPRTRAYNALLKGYVKTGPLKDAESMVSE 335
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ K G+ P TY L +++Y WE +I ++ ME V + V+
Sbjct: 336 MEKRGVSPDEHTYSLLIDAYVNA-------GRWESARI-----VLKEMEAGDVQPNSFVF 383
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH-IDDCISIFQHM 458
L + G WQ V++++KS+ KP + F ++I + + +D ++ F M
Sbjct: 384 SRLLAGFRDRGEWQKTFQVLKEMKSI-GVKP-DRQFYNVVIDTFGKFNCLDHAMTTFDRM 441
Query: 459 -KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
+ EP+ T N ++ + ++ A+E+FE R P TY
Sbjct: 442 LSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC-------------LPCATTY 488
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+ M+ + +W+ + + M G + H L+ ++G+ + + +
Sbjct: 489 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 548
Query: 578 AGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAMA 611
G P + LI A Q E+AV M
Sbjct: 549 VGLKPSSTMYNA-LINAYAQRGLSEQAVNAFRVMT 582
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 117/299 (39%), Gaps = 50/299 (16%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC------------ 362
+ YNA++ AC ++ + + ++R+ G + Y L ++S R
Sbjct: 169 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 228
Query: 363 -------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
L+ ++ F + G ++A+ + + G+ + + L ++
Sbjct: 229 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 288
Query: 410 GRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
GR +A + E+ LR S KP + L+ + G + D S+ M K P+
Sbjct: 289 GRTLEAEALFEE---LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDE 345
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T + ++ Y + A+ + +E +GD ++P+ + +S +L
Sbjct: 346 HTYSLLIDAYVNAGRWESARIVLKEME----------AGD---VQPNSFVFSRLLAGFRD 392
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIP 582
+W+ V K M G + D+ + V GK + L+HA FD +L G P
Sbjct: 393 RGEWQKTFQVLKEMKSIGVKPDRQFYN---VVIDTFGKFNCLDHAMTTFDRMLSEGIEP 448
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 182/449 (40%), Gaps = 63/449 (14%)
Query: 192 QMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
Q +LL L R+A+ V++ + G D S YT L++ L + G A+++
Sbjct: 99 QATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASS---YTFLVSSLCRKGNVGYAMQLV 155
Query: 252 NLMLEDCNLYP-DIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PS------------ 295
+ M E YP + Y+S+ L G L + ++L++R+ QK P+
Sbjct: 156 DKMEEYG--YPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAY 213
Query: 296 -KRIKNMHRKNWDPVL----EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+R + K D ++ EP+LV YN +L + + +F++L G P+
Sbjct: 214 KERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVV 273
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+Y +L+R+ EG+ EA + M + Y L L +G
Sbjct: 274 SY------------NILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHG 321
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTV 469
R + A+ V+E++ R KP ++ +I G +D + Q M HC PN GT
Sbjct: 322 RTEHALEVLEEMIRARF-KPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTY 380
Query: 470 NAMLKVYSRN---DMFSKAKELFEETTRANSSGYTFL------SGDGAP----------- 509
NA+ + + FS + L + + Y + G+ P
Sbjct: 381 NAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKY 440
Query: 510 -LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
PD +TYSS++ ++ M + + D + L++ ++ + L
Sbjct: 441 GFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPDTENYNSLILGCCKSRRTDLA 499
Query: 569 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 597
F+ ++ G +P+ +T +L++ I+
Sbjct: 500 LDVFEIMVGKGYLPNETTYT-ILVEGIIH 527
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/391 (20%), Positives = 161/391 (41%), Gaps = 51/391 (13%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K + + + YT ++ +G+ G+ EA+ +FN M+ + L ++ Y+++ L +
Sbjct: 261 MKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITE-GLTLNVVGYNTLMQVLAKGK 319
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW---KGVFW 335
++ + +++ RM + + P+ Y+ +LN V Q GV
Sbjct: 320 MVDKAIQVFSRMVETGCR---------------PNEYTYSLLLNLLVAEGQLVRLDGVVE 364
Query: 336 VFKQLRKSG----LKPSAATYGLAMESYR-------------RCLLKVLVRAFWEEGKIN 378
+ K+ G L + + G E++R R ++ + GK
Sbjct: 365 ISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTI 424
Query: 379 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
EA+ + + ++GVV +Y + L + + EK+K S P T+ L
Sbjct: 425 EAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPS-PDIFTYNIL 483
Query: 439 IISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
I S G +D+ I+IF+ + + C+P+I + N+++ +N +A F+E
Sbjct: 484 IASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKG- 542
Query: 498 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 557
L PD TYS+++E + E +++ M + GCQ + + LL
Sbjct: 543 ------------LNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLD 590
Query: 558 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ G+ + + + G P + +T
Sbjct: 591 CLEKNGRTAEAVDLYSKMKQQGLTPDSITYT 621
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 47/227 (20%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-NLMLEDCNLYP 262
G +Q + D +K F Y L+A G+ G EA+ IF L DC P
Sbjct: 453 GKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCK--P 510
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
DI +Y+S+ LG+ G + E R K M K L PD+V Y+ ++
Sbjct: 511 DIISYNSLINCLGKNGDVDE-----------AHVRFKEMQEKG----LNPDVVTYSTLME 555
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA 382
+ + + + +F+++ G +P+ TY + ++ CL K G+ EAV
Sbjct: 556 CFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLD----CLEK--------NGRTAEAVD 603
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
M+Q+G+ + Y V+E+++S+ H K
Sbjct: 604 LYSKMKQQGLTPDSITY-----------------TVLERLQSVSHGK 633
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 105/556 (18%), Positives = 216/556 (38%), Gaps = 88/556 (15%)
Query: 124 LNWVLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMN 182
LN +++ L FA +V + KR + A + L+ L R K F +
Sbjct: 101 LNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVV 160
Query: 183 QSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAG 242
G + L+ GL G + +L + G K D+ +Y ++ L K
Sbjct: 161 AQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDV---VMYNTIIHSLCKNK 217
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK--------- 293
+A +++ M+ + P++ Y+++ +G LKE L+ M+ K
Sbjct: 218 LLGDACDLYSEMIVK-GISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTF 276
Query: 294 -----------PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
K K + ++PD+V YN++++ ++ K +VF + +
Sbjct: 277 NTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQ 336
Query: 343 SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
SG+ P+ TY ++ +E ++EA++ M+ + ++ Y L
Sbjct: 337 SGVTPNVRTY------------TTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSL 384
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KD 460
LC N + A+ + +K+K + +P ++T L+ + GG +++ FQ + K
Sbjct: 385 IDGLCKNHHLERAIALCKKMKE-QGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKG 443
Query: 461 HCEPNIGTVNAMLKVYSRNDMFSKAKE-----------------------LFEE------ 491
+ N+ T N M+ + D+F +A + LFE+
Sbjct: 444 Y-HLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKA 502
Query: 492 ----------------TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
R + A +KPD TY ++++ ++ ++ +Y
Sbjct: 503 EKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKY 562
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
V+ MA G + + ++ + F+ + P+ + +T LI A+
Sbjct: 563 VFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTS-LIDAL 621
Query: 596 VQSNY-EKAVALINAM 610
++++ E+A+AL+ M
Sbjct: 622 CKNHHLERAIALLKEM 637
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 88/483 (18%), Positives = 182/483 (37%), Gaps = 129/483 (26%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G ++A S+L+ +K K + L+ LGK G+ A + +M+
Sbjct: 244 LVYGFCIMGHLKEAFSLLNE---MKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMM 300
Query: 256 EDCNLYPDIAAYHS----------------VAVTLGQVGL---LKELVKLI-----ERMR 291
+ C + PD+ Y+S V ++ Q G+ ++ +I E+M
Sbjct: 301 KAC-IKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMV 359
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ + M KN + PD+V Y ++++ +H + + K++++ G++P +
Sbjct: 360 DEAMSLFEEMKYKN----MIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYS 415
Query: 352 YGL-------------AMESYRRCLLK----------VLVRAFWEEGKINEAVAAVRNME 388
Y + A E ++R L+K V++ + EA+ ME
Sbjct: 416 YTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKME 475
Query: 389 QRGVVGTASVYYELACCL-----------------------CNNGRWQDAMLVVEK---- 421
+G + A + + C L R ++A +V+
Sbjct: 476 GKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKA 535
Query: 422 ------------------IKSLRHSK------------PLEITFTGLIISSMDGGHIDDC 451
+ L+H+K P +T +I +D+
Sbjct: 536 CIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEA 595
Query: 452 ISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 510
+S+F+ MK + PNI T +++ +N +A L +E +
Sbjct: 596 MSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHG-------------I 642
Query: 511 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 570
+PD Y+Y+ +L+ + + E + +++ + + G L+ + ++ E +AG L +
Sbjct: 643 QPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAG---LFDE 699
Query: 571 AFD 573
A D
Sbjct: 700 ALD 702
Score = 39.7 bits (91), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 36/206 (17%), Positives = 85/206 (41%), Gaps = 25/206 (12%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-------- 361
++PD+V Y +++ ++ K +VF + + G+ P+ Y + ++ +
Sbjct: 537 IKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAM 596
Query: 362 ---------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
L+ A + + A+A ++ M++ G+ Y L L
Sbjct: 597 SLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGL 656
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 465
C +GR + A + +++ + +++ +T +I G D+ + + M+D C P+
Sbjct: 657 CKSGRLEGAKEIFQRLLVKGYHLNVQV-YTAMINELCKAGLFDEALDLQXKMEDKGCMPD 715
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEE 491
T + ++ D KA+++ E
Sbjct: 716 AVTFDIIIWALFEKDENDKAEKILXE 741
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 146/359 (40%), Gaps = 68/359 (18%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G WR+A+++++ + D YTKL++ L +A EA+ N M L P+
Sbjct: 284 GKWREALTLMETENFVPDT------VFYTKLISGLCEASLFEEAMDFLNRMRATSCL-PN 336
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ Y ++ L + + + KR+ NM P ++N++++A
Sbjct: 337 VVTYSTL------------LCGCLNKKQLGRCKRVLNMMMMEG---CYPSPKIFNSLVHA 381
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYG-------------------LAMESYRRCLL 364
S + + K++ K G P Y LA ++Y L
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLA 441
Query: 365 KVLV----------RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
+V R GK +A + +R M +G + S Y ++ LCN + +
Sbjct: 442 TGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMEL 501
Query: 415 AMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAM 472
A L+ E++K R ++ T+T ++ S G I+ F M++ C PN+ T A+
Sbjct: 502 AFLLFEEMK--RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTAL 559
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
+ Y + S A ELFE T LS +G P+ TYS++++ A Q E
Sbjct: 560 IHAYLKAKKVSYANELFE----------TMLS-EGC--LPNIVTYSALIDGHCKAGQME 605
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 134/387 (34%), Gaps = 64/387 (16%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L K G+ EAL ++E N PD Y + L + L +E + + RMR
Sbjct: 280 LCKVGKWREALT----LMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL- 334
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
P++V Y+ +L C+ Q V + G PS +
Sbjct: 335 --------------PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF----- 375
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
LV A+ G + A ++ M + G VY L +C + L
Sbjct: 376 -------NSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHL 428
Query: 418 V--VEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS-----------IFQHMKDHCEP 464
+ EK S E+ TG++++ ++ C+ I + + P
Sbjct: 429 LELAEKAYS-------EMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP 481
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
+ T + +L A LFEE R L D YTY+ M+++
Sbjct: 482 DTSTYSKVLGYLCNASKMELAFLLFEEMKRGG-------------LVADVYTYTIMVDSF 528
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
A E + M GC + + L+ +A K F+++L G +P+
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAMA 611
+ ++ ++ EKA + M
Sbjct: 589 VTYSALIDGHCKAGQMEKACQIFERMC 615
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+YT+++ L K G+ EA ++ +M E+ P++ Y ++ G++G ++ ++L+ER
Sbjct: 747 IYTEMIDGLCKVGKTDEAYKLMQMM-EEKGCQPNVVTYTAMIDGFGRIGKIETCLELLER 805
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M K + P+ V Y +++ C + + ++++++ A
Sbjct: 806 MGSKG---------------VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHA 850
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
A Y +E + + + E++ + + Q S+Y L L
Sbjct: 851 AGYRKVIEGFNK--------------EFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKA 896
Query: 410 GRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
R + A+ ++E++ + + T+ LI S +D +F M K P +
Sbjct: 897 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQ 956
Query: 468 TVNAMLKVYSRNDMFSKAKELFE 490
T +++K RN S+A L +
Sbjct: 957 TFCSLIKGLFRNSKISEALLLLD 979
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 114/311 (36%), Gaps = 50/311 (16%)
Query: 316 VYNAVLNACVPSHQWKGVFWV----FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
V+ LN V + G F + +L+ +PS +TY L++AF
Sbjct: 198 VFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTY------------NCLIQAF 245
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ ++ A R M + A LC G+W++A+ ++E + P
Sbjct: 246 LKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTLMET----ENFVPD 301
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ +T LI + ++ + M+ C PN+ T + +L + K +
Sbjct: 302 TVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVL- 360
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ +G P ++S++ A T+ Y + K M G
Sbjct: 361 ----------NMMMMEGC--YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYV 408
Query: 551 KHAWLLVEASRAG-----KCHLL---EHAFDSLLEAGEIPHPL---FFTEMLIQAIVQSN 599
+ L+ S G CHLL E A+ +L G + + + FT L A
Sbjct: 409 VYNILI--GSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSA---GK 463
Query: 600 YEKAVALINAM 610
YEKA ++I M
Sbjct: 464 YEKAFSVIREM 474
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 99/264 (37%), Gaps = 51/264 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF--------------VYTKLLAILGKA 241
L+ G G +A + + + G KD D+ F +Y LL K
Sbjct: 594 LIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKL 653
Query: 242 GRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM---------- 290
R EA ++ + M +E C P+ Y ++ L +VG L E ++ M
Sbjct: 654 HRVEEARKLLDAMSMEGCE--PNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLY 711
Query: 291 -------RQKPSKRIKNMHRKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
R KR +++ K +LE P++V+Y +++ + + + +
Sbjct: 712 TYSSLIDRYFKVKR-QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 770
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ + G +P+ TY ++ F GKI + + M +GV Y
Sbjct: 771 MEEKGCQPNVVTY------------TAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTY 818
Query: 400 YELACCLCNNGRWQDAMLVVEKIK 423
L C NG A ++E++K
Sbjct: 819 RVLIDHCCKNGALDVAHNLLEEMK 842
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/437 (19%), Positives = 172/437 (39%), Gaps = 80/437 (18%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + ++ L K G EA +F+ M ++ PD+ ++S+ G+ G L E+ +L+E
Sbjct: 189 FTFNIVIDFLCKEGELAEARSLFSRM-KEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVE 247
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR+ K D+V YNA++N + + + F +++ G+ +
Sbjct: 248 EMRRSGCK---------------ADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMAN 292
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
T+ V AF +EG + EA+ M RG+ Y L C
Sbjct: 293 VVTF------------STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLI---------------------------- 439
GR DA+++++++ +R PL +T+T L+
Sbjct: 341 AGRLDDAIVLLDEM--VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANE 398
Query: 440 --ISSMDGGHI-----DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+++ GH + + + MK+ E +I A+++ +AK L
Sbjct: 399 LLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLL-- 456
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
T+ + SG L+P+ Y++M++A + + + + + SG Q +
Sbjct: 457 -TKMDESG----------LEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVIT 505
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ L+ +AG F+ + + G P+ +T ++ +AV L N M
Sbjct: 506 YCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMV 565
Query: 612 YAPFHITERQWTELFES 628
+ + + +T L +
Sbjct: 566 HKGMSLDKVVYTALLDG 582
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/461 (19%), Positives = 181/461 (39%), Gaps = 77/461 (16%)
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQV- 277
+D+ SR V ++L+A+ RPH A + +L+ L P +A SV TL V
Sbjct: 77 RDRLYAHSRRVLSRLVAL----RRPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVL 132
Query: 278 ---GLLKELVKLIERMRQ---KPSKRIKN-------------MHRKNWDPVLEPDLVVYN 318
GLL + V+ + R+R+ P+ R N + R+ ++ + P++ +N
Sbjct: 133 ADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFN 192
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC---------------- 362
V++ + +F ++++ G P T+ ++ Y +C
Sbjct: 193 IVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRS 252
Query: 363 -------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+ F + G++ A M++ GV+ + C G ++A
Sbjct: 253 GCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREA 312
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLK 474
M + +++ +R E T+T LI + G +DD I + M P N+ T ++
Sbjct: 313 MKLFAQMR-VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVD 371
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
+ ++A+++ +A ++ +E Y++++ E
Sbjct: 372 GLCKERKVAEAEDVLRMMEKAG-------------VRANELLYTTLIHGHFMNKNSEKAL 418
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD---SLL----EAGEIPHPLFF 587
+ M G +LD + + L+ G C++ H D SLL E+G P+ + +
Sbjct: 419 GLLSEMKNKGLELDISLYGALI-----QGLCNV--HKLDEAKSLLTKMDESGLEPNYIIY 471
Query: 588 TEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
T M+ +A+A++ + + F + L +
Sbjct: 472 TTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDG 512
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 94/226 (41%), Gaps = 31/226 (13%)
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
K++ K + LEP+ ++Y +++AC S + + +++ SG +P+ TY
Sbjct: 453 KSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYC----- 507
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
L+ + G I+EA++ M G+ Y L LC NG +A+ +
Sbjct: 508 -------ALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560
Query: 419 VEKI--KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 475
++ K + K + +T L+ + G++ D ++ M D + ++ +
Sbjct: 561 FNEMVHKGMSLDK---VVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISG 617
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
+ +M +A+E+F E G + PD Y+ ++
Sbjct: 618 FCNLNMMPEAREVFSEMI-------------GHGIAPDRAVYNCLI 650
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/447 (19%), Positives = 173/447 (38%), Gaps = 66/447 (14%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
+ + M + G+M + +G R+AM + ++ + + F YT L
Sbjct: 278 YGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQ---MRVRGMALNEFTYTCL 334
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE-----R 289
+ KAGR +A+ + + M+ P ++V V GL KE K+ E R
Sbjct: 335 IDGTCKAGRLDDAIVLLDEMVRQG--VPLNVVTYTVLVD----GLCKER-KVAEAEDVLR 387
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +K R + +Y +++ + + + +++ GL+
Sbjct: 388 MMEKAGVRANEL--------------LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDI 433
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+ YG L++ K++EA + + M++ G+ +Y + +
Sbjct: 434 SLYG------------ALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 468
G+ +A+ +++KI +P IT+ LI G ID+ IS F M+D +PN+
Sbjct: 482 GKVPEAIAMLQKILD-SGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQA 540
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
A++ +N ++A +LF E S D+ Y+++L+
Sbjct: 541 YTALVDGLCKNGCLNEAVQLFNEMVHKGMS-------------LDKVVYTALLDGYLKQG 587
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-----LEHAFDSLLEAGEIPH 583
+ M SG QLD + + +G C+L F ++ G P
Sbjct: 588 NLHDAFALKAKMIDSGLQLDLFCYTCFI-----SGFCNLNMMPEAREVFSEMIGHGIAPD 642
Query: 584 PLFFTEMLIQAIVQSNYEKAVALINAM 610
+ ++ + N E+A++L + M
Sbjct: 643 RAVYNCLISKYQKLGNLEEAISLQDEM 669
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 66/338 (19%), Positives = 128/338 (37%), Gaps = 35/338 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VLVD L + A+ +R+M ++G+ E L+ G + +A+ +L +
Sbjct: 368 VLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNK 427
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ D+ +Y L+ L + EA + M ++ L P+ Y ++ + G
Sbjct: 428 GLELDIS---LYGALIQGLCNVHKLDEAKSLLTKM-DESGLEPNYIIYTTMMDACFKSGK 483
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ E + +++++ D +P+++ Y A+++ + F +
Sbjct: 484 VPEAIAMLQKI---------------LDSGFQPNVITYCALIDGLCKAGSIDEAISHFNK 528
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+R GL P+ Y LV + G +NEAV M +G+ VY
Sbjct: 529 MRDLGLDPNVQAY------------TALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVY 576
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHM 458
L G DA + K K + L++ +T I + + + +F M
Sbjct: 577 TALLDGYLKQGNLHDAFAL--KAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634
Query: 459 KDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
H P+ N ++ Y + +A L +E R
Sbjct: 635 IGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERV 672
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/441 (20%), Positives = 177/441 (40%), Gaps = 53/441 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y L+ AG AL +F+ M E P++ Y+++ ++ + + KL+
Sbjct: 206 FTYNILIRGFCFAGNIDVALTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLR 264
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M K LEP+L+ YN V+N + K V +V ++ + G
Sbjct: 265 SMALKG---------------LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY L++ + +EG ++A+ M + G+ + Y L +C
Sbjct: 310 EVTY------------NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 467
G AM +++++ +R P E T+T L+ G++++ + + M D+ P++
Sbjct: 358 AGNMNRAMEFLDQMR-VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 468 TVNAMLKVYSRN----DMFSKAKELFEETTRANSSGY-TFLSG-------DGA------- 508
T NA++ + D + +++ E+ + Y T LSG D A
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 509 ---PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
+KPD TYSS+++ + + +Y+ M G D+ + L+ G
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTEL 625
+ ++E G +P + ++ ++ QS +A L+ + Y ++ + L
Sbjct: 537 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 626 FESNEDRISRDKLEKLLNALC 646
E N I + L+ C
Sbjct: 597 IE-NCSNIEFKSVVSLIKGFC 616
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 157/382 (41%), Gaps = 51/382 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G G+ A+++ D ++ K L + Y L+ K + + ++ M
Sbjct: 211 LIRGFCFAGNIDVALTLFD---KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP--------SKRIKN------- 300
L P++ +Y+ V L + G +KE+ ++ M ++ + IK
Sbjct: 268 LK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 301 -----MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
MH + L P ++ Y +++++ + Q+R GL P+ TY
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY--- 383
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
LV F ++G +NEA +R M G + Y L C G+ +DA
Sbjct: 384 ---------TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 474
+ V+E +K + P ++++ ++ +D+ + + + M + +P+ T +++++
Sbjct: 435 IAVLEDMKE-KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
+ +A +L+EE R G P PDE+TY++++ A E
Sbjct: 494 GFCEQRRTKEACDLYEEMLRV-----------GLP--PDEFTYTALINAYCMEGDLEKAL 540
Query: 535 YVYKGMALSGCQLDQTKHAWLL 556
++ M G D ++ L+
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLI 562
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 171/456 (37%), Gaps = 77/456 (16%)
Query: 168 REMTAKNWKFVRI-MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV--YGLKDKRD 224
RE K FV MN+ G E L+KG +G++ QA+ + + +GL
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT---- 342
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
S YT L+ + KAG + A+ + M L P+ Y ++ Q G + E
Sbjct: 343 -PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+++ M D P +V YNA++N + + + V + +++ G
Sbjct: 401 RVLREMN---------------DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 345 LKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
L P +Y ++ F ++EA+ R M ++G+ Y L
Sbjct: 446 LSPDVVSYS------------TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 405 CLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-C 462
C R ++A + E++ LR P E T+T LI + G ++ + + M +
Sbjct: 494 GFCEQRRTKEACDLYEEM--LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 463 EPNIGTVNAMLKVYSRNDMFSKAKEL-----FEETTRANSSGYT---------------- 501
P++ T + ++ ++ +AK L +EE+ ++ + +T
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSL 611
Query: 502 ----------------FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
F S G KPD Y+ M+ A +YK M SG
Sbjct: 612 IKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
L L+ + GK + L +L + E+
Sbjct: 672 LLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCEL 707
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 121/308 (39%), Gaps = 37/308 (12%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
LVD S++ + ++ +R MN +G + L+ G G A++VL+ +K
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE---DMK 442
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+K Y+ +L+ ++ EALR+ M+E + PD Y S+ +
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDTITYSSLIQGFCEQRRT 501
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
KE L E M + L PD Y A++NA + + ++
Sbjct: 502 KEACDLYEEMLRVG---------------LPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 341 RKSGLKPSAATY-----GLAMESYRRCLLKVLVRAFWEEGKINEA-----VAAVRNMEQR 390
+ G+ P TY GL +S R ++L++ F+EE ++ + N+E +
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
VV + C G +A V E + H KP + +I G I
Sbjct: 607 SVVSLIKGF-------CMKGMMTEADQVFESMLGKNH-KPDGTAYNIMIHGHCRAGDIRK 658
Query: 451 CISIFQHM 458
++++ M
Sbjct: 659 AYTLYKEM 666
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 77/389 (19%), Positives = 147/389 (37%), Gaps = 97/389 (24%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFW-VFKQLRKSGLKPSAATYGLAMESY----------- 359
P ++ YNAVL+A + S + VFK++ +S + P+ TY + + +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 360 -------RRCLLKV-----LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ CL V L+ + + KI++ +R+M +G+ Y + LC
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 408 NNGRWQDAMLVVEKI---------------------------------KSLRHS-KPLEI 433
GR ++ V+ ++ + LRH P I
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
T+T LI S G+++ + M+ C PN T ++ +S+ ++A + E
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC-PNERTYTTLVDGFSQKGYMNEAYRVLRE 405
Query: 492 TTRANSSGYT--------FLSGDGAP-----------------LKPDEYTYSSMLEASAT 526
N +G++ ++G L PD +YS++L
Sbjct: 406 ---MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLL---VEASRAGK-CHLLEHAFDSLLEAGEIP 582
++ + V + M G + D ++ L+ E R + C L ++ +L G P
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL----YEEMLRVGLPP 518
Query: 583 HPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+T ++ ++ + EKA+ L N M
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMV 547
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 79/202 (39%), Gaps = 20/202 (9%)
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+ LI G+ID +++F M+ C PN+ T N ++ Y +
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK---------- 252
Query: 489 FEETTRANSSGYTFLSGDGAP-LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
R G+ L L+P+ +Y+ ++ + + +V M G L
Sbjct: 253 ----LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 548 DQTKHAWLLVEASRAGKCH--LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
D+ + L+ + G H L+ HA +L G P + +T ++ N +A+
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHA--EMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 366
Query: 606 LINAMAYAPFHITERQWTELFE 627
++ M ER +T L +
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVD 388
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 103/480 (21%), Positives = 193/480 (40%), Gaps = 57/480 (11%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDKG 204
EK ++ LV+ R + ++ + V M GL +FT L+ GL +G
Sbjct: 252 EKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNA---LINGLCKEG 308
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI 264
S+ +A VLD + G+ + + + +L + EA R+FN ML+ + PD+
Sbjct: 309 SYERAKRVLDEMLGVGLCPNAAT---FNPMLVESCRKEDVWEAERVFNEMLQR-GVVPDL 364
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIK----NMHRKNWD---------P 308
++ S+ + G L + E+M+ P I N + +N D
Sbjct: 365 ISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNE 424
Query: 309 VLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL 364
++E D+V YN +LN +FK++ + G+ P T L
Sbjct: 425 MVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYT------------L 472
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
L+ + ++G + +A++ M R + Y L C G + A + + S
Sbjct: 473 TTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMIS 532
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 483
R P I+F+ LI G + + ++ MK+ +P + T N ++K Y R S
Sbjct: 533 -REIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLS 591
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
KA + T +S +G P PD TY++++ + ++ ++ M
Sbjct: 592 KANDFLN----------TMIS-EGVP--PDCITYNTLINSFVKEENFDRAFFLINNMEER 638
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
G + + +L SR G+ E +++ G P +T ++ + + N ++A
Sbjct: 639 GLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEA 698
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/415 (19%), Positives = 157/415 (37%), Gaps = 88/415 (21%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+E+ +Y D+ Y+++ + GL+ E L++ M K L+P L
Sbjct: 250 MEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG---------------LKPGL 294
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG-LAMESYRR------------ 361
YNA++N ++ V ++ GL P+AAT+ + +ES R+
Sbjct: 295 FTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNE 354
Query: 362 ----------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
+V F G++ A+A M+ G+V +Y L C N
Sbjct: 355 MLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDD 414
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
A+ + ++ R +T+ L+ G +DD +F+ M + P+ T+
Sbjct: 415 VSGALKMRNEMVE-RGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLT 473
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
++ Y ++ +KA LFE T + LKPD TY+++++ +
Sbjct: 474 TLIHGYCKDGNMTKALSLFETMTLRS-------------LKPDVVTYNTLMDGFCKVGEM 520
Query: 531 E--------------YFEYVYKGMALSG-CQLDQTKHAW-------------LLVEAS-- 560
E + Y+ + ++G C L A+ LV +
Sbjct: 521 EKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTI 580
Query: 561 -----RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
RAG ++++ G P + + ++ + + N+++A LIN M
Sbjct: 581 IKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNM 635
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 108/319 (33%), Gaps = 40/319 (12%)
Query: 318 NAVLNACVPSHQWKGVFW-VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGK 376
NA+L A V W + W V++ KSG + T L ++V A ++GK
Sbjct: 193 NALLGAIVKV-GWVDLAWKVYEDFVKSGNIVNVYT------------LNIMVNALCKDGK 239
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
++ + ME++GV Y L C G +A +V+ + + KP T+
Sbjct: 240 LDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAG-KGLKPGLFTYN 298
Query: 437 GLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSR-----------NDM-- 481
LI G + + M C PN T N ML R N+M
Sbjct: 299 ALINGLCKEGSYERAKRVLDEMLGVGLC-PNAATFNPMLVESCRKEDVWEAERVFNEMLQ 357
Query: 482 ---------FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
FS +F + F G L PD Y+ ++
Sbjct: 358 RGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSG 417
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 592
+ M GC +D + LL R + F ++E G P T ++
Sbjct: 418 ALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIH 477
Query: 593 QAIVQSNYEKAVALINAMA 611
N KA++L M
Sbjct: 478 GYCKDGNMTKALSLFETMT 496
>gi|42570403|ref|NP_850357.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330254930|gb|AEC10024.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 683
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 179/428 (41%), Gaps = 71/428 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH-EALRIFNLM 254
L+ G G+WR+A+ V + DL V ++ K+GR + +AL F LM
Sbjct: 87 LINACGSSGNWREALEVCKKMTDNGVGPDL----VTHNIVLSAYKSGRQYSKALSYFELM 142
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ + PD ++ + L ++G + + L MR+K ++ PD+
Sbjct: 143 -KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE-------------CRPDV 188
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V + ++++ + + VF+ + GLKP+ +Y L+ A+
Sbjct: 189 VTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY------------NALMGAYAVH 236
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN-------GRWQDAMLVVEKIKSLRH 427
G A++ + +++Q G++ Y CL N+ G+ ++ L++ K
Sbjct: 237 GMSGTALSVLGDIKQNGIIPDVVSY----TCLLNSYGRSRQPGKAKEVFLMMRK----ER 288
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR-------N 479
KP +T+ LI + G + + + IF+ M +D +PN+ +V +L SR +
Sbjct: 289 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVD 348
Query: 480 DMFSKAKE--LFEETTRANSSGYTFL-------------SGDGAPLKPDEYTYSSMLEAS 524
+ S A+ + T NS+ +++ S +K D T++ ++ S
Sbjct: 349 TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 408
Query: 525 ATAHQW-EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
++ E Y+ K M L + ++ +L S+ G+ E F+ + AG P
Sbjct: 409 CRMSKYPEAISYL-KEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPD 467
Query: 584 PLFFTEML 591
+ +T ML
Sbjct: 468 VIAYTSML 475
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 132/295 (44%), Gaps = 45/295 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT LL G++ +P +A +F LM+ P++ Y+++ G G L E V++ +M
Sbjct: 261 YTCLLNSYGRSRQPGKAKEVF-LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 319
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q ++P++V +L AC S + V V + G+ + A
Sbjct: 320 EQDG---------------IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 364
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
Y A+ SY ++ +A+A ++M ++ V + + L C
Sbjct: 365 AYNSAIGSY------------INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 412
Query: 411 RWQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGT 468
++ +A+ +++++ L S PL + ++ ++ + G + + SIF MK CEP++
Sbjct: 413 KYPEAISYLKEMEDL--SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIA 470
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+ML Y+ ++ + KA ELF E + +G ++PD S+++ A
Sbjct: 471 YTSMLHAYNASEKWGKACELFLE-----------MEANG--IEPDSIACSALMRA 512
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 133/325 (40%), Gaps = 36/325 (11%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ P YN ++NAC S W+ V K++ +G+ P T+ + + +Y+
Sbjct: 77 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYK--------- 127
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR-HS 428
+ ++A++ M+ V + + + CL G+ A+ + ++ R
Sbjct: 128 ---SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAEC 184
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA-- 485
+P +TFT ++ G I++C ++F+ M + +PNI + NA++ Y+ + M A
Sbjct: 185 RPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALS 244
Query: 486 -----------KELFEETTRANSSGYTFLSGDGAPL---------KPDEYTYSSMLEASA 525
++ T NS G + G + KP+ TY+++++A
Sbjct: 245 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYG 304
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+ +++ M G + + LL SR+ K ++ + G +
Sbjct: 305 SNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 364
Query: 586 FFTEMLIQAIVQSNYEKAVALINAM 610
+ + I + EKA+AL +M
Sbjct: 365 AYNSAIGSYINAAELEKAIALYQSM 389
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 31/220 (14%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+PD Y+A++NA + QW+ + + ++ + PS +TY L+ A
Sbjct: 43 KPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTY------------NNLINA 90
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR-WQDAMLVVEKIKSLRHSK 429
G EA+ + M G VG V + + +GR + A+ E +K + +
Sbjct: 91 CGSSGNWREALEVCKKMTDNG-VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK-VR 148
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKD---HCEPNIGTVNAMLKVYSRNDMFSKAK 486
P TF +I G + +F M++ C P++ T +++ +YS +
Sbjct: 149 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCR 208
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
+FE + +G LKP+ +Y++++ A A
Sbjct: 209 AVFEA-----------MVAEG--LKPNIVSYNALMGAYAV 235
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 106/269 (39%), Gaps = 32/269 (11%)
Query: 328 HQW----KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
H W +G+F+ +++K KP A TY L+ A G+ A+
Sbjct: 24 HNWVDQARGLFF---EMQKWSCKPDAETY------------DALINAHGRAGQWRWAMNL 68
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 443
+ +M + + + S Y L ++G W++A+ V +K+ P +T ++ +
Sbjct: 69 MDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTD-NGVGPDLVTHNIVLSAYK 127
Query: 444 DGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
G +S F+ MK P+ T N ++ S+ S+A +LF
Sbjct: 128 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR------ 181
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
A +PD T++S++ + + E V++ M G + + + L+ +
Sbjct: 182 -----AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 236
Query: 563 GKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
G + + G IP + +T +L
Sbjct: 237 GMSGTALSVLGDIKQNGIIPDVVSYTCLL 265
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 128/308 (41%), Gaps = 45/308 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL + G +AM+V Y +K S +Y L+ L K G +AL++ M+
Sbjct: 362 LINGLCNDGDMNRAMAVF---YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418
Query: 256 E-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM------HRKN 305
E C+ PDI Y+ V L ++G L + ++ K P N ++N
Sbjct: 419 EHGCS--PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRN 476
Query: 306 WDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
D +E PD++ YN +LN + + V FK + + G P+ TY
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITY-- 534
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
+L+ +F ++ K++EA+ + M+ RG+ L C LC+NG
Sbjct: 535 ----------NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDK 584
Query: 415 A---MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 470
A + +EK +S + F +I + + ++ +F M C P+ T
Sbjct: 585 AYELFVTIEKEYKFSYSTAI---FNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYR 641
Query: 471 AMLKVYSR 478
M+ Y +
Sbjct: 642 VMIDSYCK 649
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/356 (19%), Positives = 134/356 (37%), Gaps = 62/356 (17%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ KL+ +L K G E+ ++F+ +++ + P++ ++ L + G + E +L+E
Sbjct: 217 LTFNKLIHVLCKKGNVQESEKLFSKVMKR-GVCPNLFTFNIFIQGLCRKGAIDEAARLLE 275
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+ + L PD++ YN ++ + ++ SG++P+
Sbjct: 276 SIVSEG---------------LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPN 320
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY ++ F + G + A +R+ +G + Y L LCN
Sbjct: 321 EFTY------------NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368
Query: 409 NGRWQDAMLVVEKI--KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 465
+G AM V + K +HS I + L+ G + + + + M +H C P+
Sbjct: 369 DGDMNRAMAVFYEAMEKGFKHSI---ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPD 425
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEE-----------TTRANSSGY-------------- 500
I T N ++ + S A + + T GY
Sbjct: 426 IWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILD 485
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
T LS + PD TY+++L A + + +K M GC + + L+
Sbjct: 486 TMLSHG---ITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILI 538
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 102/518 (19%), Positives = 200/518 (38%), Gaps = 88/518 (16%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDL-KSRFVYTKLLAILGKAGRPHEALRIFNL 253
KL+ L KG+ +++ + V KR + + F + + L + G EA R+
Sbjct: 221 KLIHVLCKKGNVQESEKLFSKVM----KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLES 276
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNM--------- 301
++ + L PD+ +Y+++ + L E + +M +P++ N
Sbjct: 277 IVSE-GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAG 335
Query: 302 HRKNWDPVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY- 352
+N D +L PD Y++++N VF + + G K S Y
Sbjct: 336 MMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYN 395
Query: 353 ---------GLAMESYRRCLLK---------------VLVRAFWEEGKINEAVAAVRNME 388
GL +++ + L+K ++V + G +++A + +
Sbjct: 396 TLVKGLSKQGLVLQALQ--LMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI 453
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGH 447
+G + + L C A+ +++ + L H P IT+ L+
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTM--LSHGITPDVITYNTLLNGLCKARK 511
Query: 448 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET-TRANSSGY----T 501
+D+ + F+ M + C PNI T N +++ + ++ S+A ELF+E TR + T
Sbjct: 512 LDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCT 571
Query: 502 FLSGDGAPLKPD-------------EYTYSS-----MLEASATAHQWEYFEYVYKGMALS 543
+ G + + D +++YS+ M+ A E ++ M S
Sbjct: 572 LICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGS 631
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE---AGEIPHPLFFTEMLIQAIVQSNY 600
C D + ++ + G L H F LLE G +P ++L V
Sbjct: 632 DCAPDNYTYRVMIDSYCKTGNID-LAHTF--LLENISKGLVPSFTTCGKVLNCLCVTHRL 688
Query: 601 EKAVALINAMAYAPFHITERQWTELFESNEDRISRDKL 638
+AV +IN M I + +FE+++ ++ K+
Sbjct: 689 SEAVVIINLMVQNG--IVPEEVNSIFEADKKEVAAPKI 724
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 62/357 (17%), Positives = 135/357 (37%), Gaps = 58/357 (16%)
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
Y + G+ G ++E V + ERM +D EP + YNA++N
Sbjct: 77 GVYIGIMRDYGRKGKVQEAVNVFERM-------------DFYD--CEPSVQSYNAIMNIL 121
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCL-------LKVL---------- 367
V + V+ +++ G+ P T+ + M+S+ C+ L++L
Sbjct: 122 VEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSF--CITGRPTAALRLLNNMPGQGCEF 179
Query: 368 --------VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
+ F++E EA M ++G+ + +L LC G Q++ +
Sbjct: 180 NAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLF 239
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 478
K+ R P TF I G ID+ + + + + P++ + N ++ + +
Sbjct: 240 SKVMK-RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCK 298
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
+ +A+ + + ++P+E+TY++++ A + + + +
Sbjct: 299 HSKLVEAECYLHKMVNSG-------------VEPNEFTYNTIINGFCKAGMMQNADKILR 345
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
G D+ ++ L+ G + F +E G H + L++ +
Sbjct: 346 DAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG-FKHSIILYNTLVKGL 401
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 171/442 (38%), Gaps = 91/442 (20%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L L KG A D + +K + L +R Y L+ K G EA + LM
Sbjct: 249 ILDALCKKGRLGDAR---DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMT 305
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ NL PD+ Y+ + L G ++E KL + M +N+ L PD+V
Sbjct: 306 QN-NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEM--------ENLK-------LLPDVV 349
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN ++N C+ + F + +++ + G+KP+A T+ ++V+ + +EG
Sbjct: 350 SYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHN------------IMVKWYCKEG 397
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK-------------- 421
K+++A + ME+ G Y L C G +A +++
Sbjct: 398 KMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLN 457
Query: 422 --IKSLRHSKPL------------------EITFTGLIISSMDGGHIDDCISIFQHMKD- 460
+++L K L E+++ LI+ G++D + ++ MK+
Sbjct: 458 TILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEK 517
Query: 461 HCEPNIGTVNAML----KVYSRNDMFSKAKELFEETTRANSSGY-TFLSG---DG----- 507
P+ T N ++ + SK EL E + + Y T L G +G
Sbjct: 518 EIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKA 577
Query: 508 ---------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
KPD +T + +L E ++ G +D + L+
Sbjct: 578 FQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITS 637
Query: 559 ASRAGKCHLLEHAFDSLLEAGE 580
+ G+ L+ AF+ L E E
Sbjct: 638 LCKEGR---LDDAFNLLSEMEE 656
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/412 (19%), Positives = 156/412 (37%), Gaps = 77/412 (18%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M GL+ L+ G G ++A +V++ + L + Y L+ L
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIEL---MTQNNLLPDVWTYNMLINGLCN 325
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKR 297
GR EA ++ + M E+ L PD+ +Y+++ + + E KL+E M +K P+
Sbjct: 326 EGRIEEAFKLRDEM-ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAV 384
Query: 298 IKNMHRKNW------------------DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
N+ K W + PD V YN ++N + F +
Sbjct: 385 THNIMVK-WYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443
Query: 340 LRKSGLKPSAAT-----------------YGLAMESYRRCLL------KVLVRAFWEEGK 376
+ + +K + T Y L + +R L+ ++++G
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN 503
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEIT 434
++ A+ M+++ ++ + Y + LC G+ + A + K+ L S P E T
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA---ISKLNELLESGLLPDETT 560
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEE-- 491
+ ++ G ++ M ++ +P++ T N +L+ M KA +LF
Sbjct: 561 YNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWV 620
Query: 492 ------TTRANSSGYTFLSGDG--------------APLKPDEYTYSSMLEA 523
T ++ T L +G L PD YTY++++ A
Sbjct: 621 SKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 143/387 (36%), Gaps = 43/387 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y +L L K GR +A R + ++ L P+ Y+ + ++G LKE +IE
Sbjct: 245 TYNTILDALCKKGRLGDA-RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIEL 303
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M Q L PD+ YN ++N + + F + ++ L P
Sbjct: 304 MTQNN---------------LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDV 348
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+Y L+ E KI+EA + M ++GV A + + C
Sbjct: 349 VSYN------------TLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKE 396
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
G+ DA + K++ S P +T+ LI G++ + M + + + + T
Sbjct: 397 GKMDDASNTITKMEESGFS-PDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVT 455
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
+N +L+ R K +E ++ + A GY DE +Y +++
Sbjct: 456 LNTILRTLCRE---KKLEEAYKLLSSARKRGYFI----------DEVSYGTLIVGYFKDG 502
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ ++ M + ++ + GK + LLE+G +P +
Sbjct: 503 NVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYN 562
Query: 589 EMLIQAIVQSNYEKAVALINAMAYAPF 615
+L + + EKA N M F
Sbjct: 563 TILHGYCREGDVEKAFQFHNKMVENSF 589
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 93/507 (18%), Positives = 181/507 (35%), Gaps = 121/507 (23%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
++G+PH A +IF M + L P++ ++ LL LV+ PS
Sbjct: 147 QSGQPHHAFQIFKKM-KRLRLRPNLLTCNT---------LLNSLVRY-------PSSHSV 189
Query: 300 NMHRKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ R+ ++ ++ P++ +N V+ +++K + K P TY
Sbjct: 190 SFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTI 249
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACC-------- 405
++ A ++G++ +A + +M+ RG++ + Y L C
Sbjct: 250 LD------------ALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEA 297
Query: 406 -------------------------LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 440
LCN GR ++A + +++++L+ P +++ LI
Sbjct: 298 ANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLL-PDVVSYNTLIN 356
Query: 441 SSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG 499
++ I + + + M + +PN T N M+K Y + A T+ SG
Sbjct: 357 GCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI---TKMEESG 413
Query: 500 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 559
++ PD TY++++ A M ++D +L
Sbjct: 414 FS----------PDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTL 463
Query: 560 SRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 616
R K LE A+ L A G + + +++ N ++A+ L
Sbjct: 464 CREKK---LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKL---------- 510
Query: 617 ITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSN-------------LSRA 663
W E+ E E S ++ LC C I+ N +
Sbjct: 511 -----WDEMKEK-EIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTI 564
Query: 664 LHALCRSEKERDLSSSAHFGSQAIDIS 690
LH CR E D+ + F ++ ++ S
Sbjct: 565 LHGYCR---EGDVEKAFQFHNKMVENS 588
>gi|449440377|ref|XP_004137961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Cucumis sativus]
gi|449483612|ref|XP_004156638.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Cucumis sativus]
Length = 736
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/419 (19%), Positives = 164/419 (39%), Gaps = 79/419 (18%)
Query: 244 PHEALRIFNLMLEDCNLY----------PDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
P EA+++F+L+ + + PD AAY+ V +G ++ ++L E M +
Sbjct: 189 PAEAIKLFSLVTQRLRRFADPTITADSRPDTAAYNGVLNACANMGAYEKFLQLFEEMEEF 248
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS----- 348
+ EPD++ YN ++ C +++ + +V + + +
Sbjct: 249 GA---------------EPDVLTYNVMIKLCARANRKDLIVYVLEAILAKDIPMCMTTLH 293
Query: 349 ---AATYGL-----------AMESYRRCLLKVLVRAFWEE-------------------G 375
AA G AM +R + ++L + +E
Sbjct: 294 SVVAAYVGFGDLETAEKVVQAMREGKRDICRILRDGYLDEIEDVEDLNEDEDELFKKLLP 353
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL--RHSKPLEI 433
+NE + + + + + +Y L N GR D + ++E +++ R S P +
Sbjct: 354 NLNEEIDSEPPLLPKIYSPNSRIYTTLMKGYMNEGRVGDTIRMLEAMRNQGDRSSHPDHV 413
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
++T ++ + + G +D + M + C N T N +LK Y R KAK+LF+E
Sbjct: 414 SYTTVVSALVKAGSMDRARQVLAEMTRIGCPANRITYNILLKGYCRLLQMDKAKDLFKEM 473
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
DGA ++PD +Y+ M++ S + M G + +
Sbjct: 474 V------------DGAGIEPDVVSYNIMIDGSILVDDSAGALGFFNEMRSKGIAPTKVSY 521
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAM 610
L+ +++G+ L FD +L + + MLI+ + + E+A L+ M
Sbjct: 522 TTLMKAFAQSGQPKLARKVFDEMLNDPRVKVDIVAWNMLIEGYCRLGWIEEAKQLVQKM 580
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 97/241 (40%), Gaps = 47/241 (19%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLE--DCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+YT L+ GR + +R+ M D + +PD +Y +V L + G + +++
Sbjct: 376 IYTTLMKGYMNEGRVGDTIRMLEAMRNQGDRSSHPDHVSYTTVVSALVKAGSMDRARQVL 435
Query: 288 ERMRQK--PSKRI------------------KNMHRKNWDPV-LEPDLVVYNAVLNACVP 326
M + P+ RI K++ ++ D +EPD+V YN +++ +
Sbjct: 436 AEMTRIGCPANRITYNILLKGYCRLLQMDKAKDLFKEMVDGAGIEPDVVSYNIMIDGSIL 495
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE------------ 374
G F ++R G+ P+ +Y M+++ + L R ++E
Sbjct: 496 VDDSAGALGFFNEMRSKGIAPTKVSYTTLMKAFAQSGQPKLARKVFDEMLNDPRVKVDIV 555
Query: 375 ------------GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
G I EA V+ M++ G S Y LA + + +A+L+ ++
Sbjct: 556 AWNMLIEGYCRLGWIEEAKQLVQKMKENGFFPDVSTYGSLANGISLARKPGEALLLWNEV 615
Query: 423 K 423
K
Sbjct: 616 K 616
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 87/443 (19%), Positives = 171/443 (38%), Gaps = 70/443 (15%)
Query: 234 LLAILG-KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL------GQVGLLKELVKL 286
LLA+ KAG A + ML L P + A+ +V L G +K +
Sbjct: 141 LLAVAAAKAGHTLYACSVIKSMLRSGYL-PHVKAWSAVVSRLAASPDDGPAEAIKLFSLV 199
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+R+R+ I R PD YN VLNAC ++ +F+++ + G +
Sbjct: 200 TQRLRRFADPTITADSR--------PDTAAYNGVLNACANMGAYEKFLQLFEEMEEFGAE 251
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P TY + ++K+ RA + + V + + + + + + +
Sbjct: 252 PDVLTYNV--------MIKLCARA----NRKDLIVYVLEAILAKDIPMCMTTLHSVVAAY 299
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID----------DCISIFQ 456
G + A VV+ ++ + I + G++D D +F+
Sbjct: 300 VGFGDLETAEKVVQAMREGKRD----------ICRILRDGYLDEIEDVEDLNEDEDELFK 349
Query: 457 HMKDHCEPNIGTVNAML-KVYSRND-MFSKAKELFEETTRANSSGYTFLS----GDGAPL 510
+ + I + +L K+YS N +++ + + R + + GD +
Sbjct: 350 KLLPNLNEEIDSEPPLLPKIYSPNSRIYTTLMKGYMNEGRVGDTIRMLEAMRNQGDRSS- 408
Query: 511 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE- 569
PD +Y++++ A A + V M GC ++ + LL G C LL+
Sbjct: 409 HPDHVSYTTVVSALVKAGSMDRARQVLAEMTRIGCPANRITYNILL-----KGYCRLLQM 463
Query: 570 ----HAFDSLLE-AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 624
F +++ AG P + + M+ +I+ + A+ N M T+ +T
Sbjct: 464 DKAKDLFKEMVDGAGIEPDVVSYNIMIDGSILVDDSAGALGFFNEMRSKGIAPTKVSYTT 523
Query: 625 LF----ESNEDRISRDKLEKLLN 643
L +S + +++R +++LN
Sbjct: 524 LMKAFAQSGQPKLARKVFDEMLN 546
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 141/365 (38%), Gaps = 54/365 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL--I 287
V+ ++ + ++GR +A ++ + M D + PD+ +++++ + G L V L +
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDTM-HDRGIDPDLVSFNTLINARSKSGCLAAGVALDLL 281
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+RQ L PD++ YN +++AC S + VF+++ S +P
Sbjct: 282 FEVRQSG---------------LRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRP 326
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
TY + + RC GK EA + ++G + A Y L
Sbjct: 327 DLWTYNAMVSVHGRC------------GKAEEAERLFGELVEKGFMPDAVTYNSLLYAFA 374
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI 466
G E++ K EIT+ +I G +D + ++ M+ C P+
Sbjct: 375 KEGNVDKVEHTCEELVKAGFKKN-EITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDA 433
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRAN----------------------SSGYTFLS 504
T M+ + D ++A ++ E+ A + TF
Sbjct: 434 VTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDC 493
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+ +KPD Y ML+ A + + E +Y+ M + D + LLV ++ K
Sbjct: 494 MIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDK 553
Query: 565 CHLLE 569
C +E
Sbjct: 554 CEEIE 558
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 99/232 (42%), Gaps = 17/232 (7%)
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
+ ++ + G+ ++A + M RG+ + L +G A + ++ +
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLA-AGVALDLL 281
Query: 423 KSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 479
+R S +P IT+ LI + +++D +++F+ M C P++ T NAM+ V+ R
Sbjct: 282 FEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRC 341
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
+A+ LF E PD TY+S+L A A + E+ +
Sbjct: 342 GKAEEAERLFGELVEKG-------------FMPDAVTYNSLLYAFAKEGNVDKVEHTCEE 388
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ +G + ++ + ++ + G+ L +D + G P + +T M+
Sbjct: 389 LVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMI 440
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 24/186 (12%)
Query: 465 NIGTVNAMLKVYSRNDMFSKAKEL---------------FEETTRANSSGYTFLSGDG-- 507
+ NAM+ VY+R+ F A++L F A S +G
Sbjct: 220 TVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALD 279
Query: 508 -------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
+ L+PD TY++++ A + + E V++ M S C+ D + ++
Sbjct: 280 LLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHG 339
Query: 561 RAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER 620
R GK E F L+E G +P + + +L + N +K + A F E
Sbjct: 340 RCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEI 399
Query: 621 QWTELF 626
+ +
Sbjct: 400 TYNTMI 405
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 91/223 (40%), Gaps = 17/223 (7%)
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
G T V+ + +GR+ DA +++ + R P ++F LI + G +
Sbjct: 216 GEGATVQVFNAMMGVYARSGRFDDARQLLDTMHD-RGIDPDLVSFNTLINARSKSGCLAA 274
Query: 451 CISI---FQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
+++ F+ + P++ T N ++ S++ A +FEE +
Sbjct: 275 GVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASEC---------- 324
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
+PD +TY++M+ + E E ++ + G D + LL ++ G
Sbjct: 325 ---RPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDK 381
Query: 568 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+EH + L++AG + + + M+ + AV L + M
Sbjct: 382 VEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEM 424
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 96/246 (39%), Gaps = 32/246 (13%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
+L KAG E ++I+N M + P++ Y S+ L +++ +I M
Sbjct: 856 MLDAFAKAGDVFEVMKIYNGM-KAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGA 914
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
K PDL ++N++LN + + V++ + ++GL+P TY
Sbjct: 915 GFK---------------PDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYN 959
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
+ Y R L + E + M +RG+ Y L +
Sbjct: 960 TLIVMYCRSL------------RPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELRE 1007
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH--IDDCISIFQHMKDHCEPNIGTVNA 471
A + E+++S + I + I G H ++ +++ + +D EP I T++
Sbjct: 1008 QADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMK--EDGIEPTIATMHI 1065
Query: 472 MLKVYS 477
++ Y
Sbjct: 1066 LMTSYG 1071
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 90/215 (41%), Gaps = 18/215 (8%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L+ A+ E G +A A NM + G + T + L +GR + +VV +++ +
Sbjct: 786 LIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDMD 845
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKA 485
K + T ++ + G + + + I+ MK PN+ +M + ++ F
Sbjct: 846 F-KISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDV 904
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+ + E +GA KPD ++S+L A ++ VY+ + +G
Sbjct: 905 ELMIAEM-------------EGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGL 951
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 580
+ D+ + L+V R+ + E F L E G+
Sbjct: 952 EPDEDTYNTLIVMYCRSLRP---EEGFTLLNEMGK 983
>gi|3107905|dbj|BAA25906.1| leaf protein [Ipomoea nil]
Length = 665
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 158/387 (40%), Gaps = 59/387 (15%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
TKL+ L + G+P E I + E+ + P + Y +V L K + L++++
Sbjct: 72 TKLMKTLIERGKPQEVHSITKGLTEEGH-RPTLVTYTTVLAALTLQKRFKSIPLLLKKVE 130
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
Q L PD + +N ++NA S K +F+++R+ G KP+A+T
Sbjct: 131 QNG---------------LRPDSIFFNPMINAFCESGNVKEAMKIFRKMREKGCKPTAST 175
Query: 352 YGLAMESY-----------------RRCLLK-------VLVRAFWEEGKINEAVAAVRNM 387
+ ++ + R +K +LV+A+ + I +A V M
Sbjct: 176 FNALIKGFGIIGKPEESSKLLEIMSREENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRM 235
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK-PLEITFTGLIIS--SMD 444
G+ Y +A R ++ E I ++++K + G+++ S +
Sbjct: 236 VGAGLKPDVVTYNTIARAY---ARGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSKE 292
Query: 445 GGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G D I++ PN+ N++LK + L T+ T +
Sbjct: 293 GNMADALKFIYKMQGFGVHPNLFIFNSLLKGF-----------LDITDTKGVDETLTLMQ 341
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
G +KPD TYS+++ A ++A E E +++ M SG + D + L RAG+
Sbjct: 342 EFG--VKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRAGE 399
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEML 591
E +++ G P+ + FT ++
Sbjct: 400 PKKAEALLEAMATHGAHPNVVMFTTII 426
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 136/338 (40%), Gaps = 35/338 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P LV Y VL A ++K + + K++ ++GL+P + ++ AF
Sbjct: 101 PTLVTYTTVLAALTLQKRFKSIPLLLKKVEQNGLRPDS------------IFFNPMINAF 148
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
E G + EA+ R M ++G TAS + L G+ +++ ++E + + KP
Sbjct: 149 CESGNVKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEESSKLLEIMSREENIKPD 208
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ T+ L+ + + +I+ + M +P++ T N + + Y+R S+A EL
Sbjct: 209 DRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIARAYARGKETSRAAELIS 268
Query: 491 E-----------TTRANSSGYT-----------FLSGDGAPLKPDEYTYSSMLEASATAH 528
+ T GY+ G + P+ + ++S+L+
Sbjct: 269 QMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNLFIFNSLLKGFLDIT 328
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ + M G + D ++ ++ S AG E F ++++G P F+
Sbjct: 329 DTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNHAFS 388
Query: 589 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 626
+ + +KA AL+ AMA H +T +
Sbjct: 389 ILAKGYVRAGEPKKAEALLEAMATHGAHPNVVMFTTII 426
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/356 (18%), Positives = 143/356 (40%), Gaps = 53/356 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ + G+ ++AM + +++K + + L+ G G+P E+ ++ +M
Sbjct: 144 MINAFCESGNVKEAMKIF---RKMREKGCKPTASTFNALIKGFGIIGKPEESSKLLEIMS 200
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N+ PD Y+ + +++ ++ RM L+PD+V
Sbjct: 201 REENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRM---------------VGAGLKPDVV 245
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN + A + + Q++ + + P+ T G+ ++ Y + EG
Sbjct: 246 TYNTIARAYARGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSK------------EG 293
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH--SKPLEI 433
+ +A+ + M+ GV ++ L + D V E + ++ KP +
Sbjct: 294 NMADALKFIYKMQGFGVHPNLFIFNSLLKGFLD---ITDTKGVDETLTLMQEFGVKPDVV 350
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T++ ++ + G ++ C +FQ M K EP+ + + K Y R KA+ L E
Sbjct: 351 TYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRAGEPKKAEALLEA- 409
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
++ GA P+ +++++ +A + E VY M C++D
Sbjct: 410 ----------MATHGA--HPNVVMFTTIISGWCSAAKMEDALRVYDRM----CRMD 449
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 140/353 (39%), Gaps = 61/353 (17%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+ Y LL L K R A ++ M + C PD +Y +V ++ ++G ++E +L
Sbjct: 179 YTYNMLLKALCKNDRVDAARKLLAEMSYKGC--IPDAVSYTTVVSSMCRLGKVEEAREL- 235
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
S RIK+ + VYNA++N H+ + VF +F ++ G+ P
Sbjct: 236 -------SMRIKSF------------VPVYNALINGFCREHKMEEVFELFNEMAVEGIDP 276
Query: 348 SAATYGLAMES------------------YRRCLLKV-----LVRAFWEEGKINEAVAAV 384
TY + + R C V L++ ++ G++ EA+
Sbjct: 277 DVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLW 336
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
M Q G Y L LC+ G+ +A+ V +K++ P E T++ LI
Sbjct: 337 NRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMER-NGVFPNETTYSTLIDGFAK 395
Query: 445 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
G + I+ M + C PN+ M+ V RN MF+ A L E N
Sbjct: 396 AGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCP----- 450
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
P+ T+++ ++ + + E+ V M GC + T + +L
Sbjct: 451 --------PNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVL 495
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/336 (18%), Positives = 143/336 (42%), Gaps = 65/336 (19%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+P + +YN VL+A + ++++ + ++ +++ G++ + TY + L++A
Sbjct: 140 KPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNM------------LLKA 187
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL----- 425
+ +++ A + M +G + A Y + +C G+ ++A + +IKS
Sbjct: 188 LCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYN 247
Query: 426 -------RHSK-----------------PLEITFTGLIISSMDGGHIDDCISIFQHM-KD 460
R K P IT++ +I + + G+++ +++ M
Sbjct: 248 ALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLR 307
Query: 461 HCEPNIGTVNAMLKVYSRNDMFSKAKEL----FEETTRANSSGY-TFLSGDGAPLKPDEY 515
C PN+ T +++K Y +A +L +E + N+ Y T + G
Sbjct: 308 GCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHG--------LC 359
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
+Y M+EA + + + E +G ++T ++ L+ ++AG ++ +
Sbjct: 360 SYGKMVEAVSVSQKMER----------NGVFPNETTYSTLIDGFAKAGDLVGASEIWNKM 409
Query: 576 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ G +P+ + +T M+ S + A+ LI MA
Sbjct: 410 ITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMA 445
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 111/282 (39%), Gaps = 38/282 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRD--LKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ GL G +A+SV K +R+ + Y+ L+ KAG A I+N
Sbjct: 354 LIHGLCSYGKMVEAVSVSQ-----KMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNK 408
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M+ + L P++ Y + L + + + LIE NM N P+
Sbjct: 409 MITNGCL-PNVVVYTCMVDVLCRNSMFNHALHLIE-----------NMANGNC----PPN 452
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
+ +N + S + + V Q+R+ G P+ TY ++ +
Sbjct: 453 TITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLD------------GLFN 500
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
+ EA+ V +E+ + Y + C+ G ++ A+ + K+ + +KP I
Sbjct: 501 AKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLL-VGGTKPDSI 559
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDHCE--PNIGTVNAML 473
T+ +I + G + I + + E P++ T ++L
Sbjct: 560 TYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLL 601
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 176/442 (39%), Gaps = 89/442 (20%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A+SVL + L + D + + L ++GK G EAL +F+ M+ + P++ Y
Sbjct: 110 ALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIG---EALDVFDKMVGE-GFQPNVVTYG 165
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L + L E + L M K + PD+ YN++++A
Sbjct: 166 TLMNGLCKDRQLTEALNLFSEMIAKG---------------ISPDIFTYNSLIHALCNLC 210
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+WK V + ++ KS + P+ + L ++V A +EGK+ EA V M
Sbjct: 211 EWKHVTTLLNEMVKSKIMPNVVS------------LNIVVDALCKEGKVTEAHDVVDMMI 258
Query: 389 QRGVVGTASVYYELA---C-------------------CLCN--------NG-----RWQ 413
Q GV Y L C C+CN NG R
Sbjct: 259 QGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRID 318
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAM 472
AM + E++ + P +T++ LI G + D I++F M + PN+ T + +
Sbjct: 319 KAMYLFEEMCR-QELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSIL 377
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
L +N ++A L + +G+ L PD Y+ ++ A E
Sbjct: 378 LDYLCKNHRLAEAMALLKAI-------------EGSNLDPDVQVYNIAIDGMCRAGDLEA 424
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTE 589
++ +A G Q D H ++ + G LL+ A F + E G + + +
Sbjct: 425 ARDLFSNLAPRGLQPDVWTHNIMIRGLCKRG---LLDEASKLFREMDENGCLRNGCTYNT 481
Query: 590 MLIQAIVQSN-YEKAVALINAM 610
+ Q ++Q+N +A+ L+ M
Sbjct: 482 -ITQGLLQNNKTSRAIQLLEEM 502
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 178/452 (39%), Gaps = 69/452 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL D + +QA+ +L + K + L YT ++ L + G+ +A +F+ ML
Sbjct: 177 LLKGLCDDKTSQQALDLLHIMADHKGRCPLDV-VAYTTVINGLLREGQLDKAYSLFDAML 235
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---------------------KP 294
D PD+ Y S+ L + + + ++ RM + KP
Sbjct: 236 -DRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKP 294
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ I + +K +EPD+V Y A+++ + + +F L K G KP + TYG
Sbjct: 295 KEAI-GIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGT 353
Query: 355 AMESYR-----------------------RCLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
+ Y + +++ A+ + K++EA+ NM Q+G
Sbjct: 354 LLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQG 413
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
+ Y + LC GR DA+ +KS P + FT LI D
Sbjct: 414 LNPDIVNYGTVLDILCTAGRVDDALSQFNSLKS-EGLAPNIVVFTTLIHGLCTCDKWDKV 472
Query: 452 ISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
+ M D C I NA++ + +AK LF+ R
Sbjct: 473 EELAFEMIDRGICLDTI-FFNAIMGNLCKKGRVIEAKNLFDLMVRIG------------- 518
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
++P+ TY+++++ + + + M +G + + ++ S+ G+ +E
Sbjct: 519 IEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGR---IE 575
Query: 570 HAFDSLLEA-GEIPHPLFFT-EMLIQAIVQSN 599
L E G+ +P T EML+Q + Q+
Sbjct: 576 DGLTLLREMDGKGVNPGIVTYEMLLQGLFQAG 607
>gi|449459510|ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
gi|449530101|ref|XP_004172035.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
Length = 680
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/425 (19%), Positives = 172/425 (40%), Gaps = 60/425 (14%)
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALR 249
E M ++ L + W++++++LDW+ ++ S + Y +L + +A + A
Sbjct: 123 ELSMRFMVSLLSRESDWQRSLAILDWIN--EEALYTPSVYAYNVVLRNVLRAKQWELAHG 180
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
+F+ M + L D Y ++ G+ G+ + +++M Q
Sbjct: 181 LFDEMRQRA-LAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDR--------------- 224
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ DLV+Y+ ++ + +F +L++SG+ P Y ++
Sbjct: 225 VSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYN------------TMIN 272
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
F + EA ++ M V+ Y L N ++ +A+ V+ ++K + +
Sbjct: 273 VFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEV--NC 330
Query: 430 PLEITFTGLIISSMDGGHID---DCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
PL++T ++I G +D + +F M K EPN+ + N +L+VY ++F +A
Sbjct: 331 PLDLTTCNIMIDVY--GQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEA 388
Query: 486 KELFEETTRA----NSSGY-TFLSGDGAPL-----------------KPDEYTYSSMLEA 523
LF R N Y T + G L +P+ TYS+++
Sbjct: 389 IHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISI 448
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
A + + +++ + SG ++DQ + ++V +AG + L + IP
Sbjct: 449 WGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNIPR 508
Query: 584 PLFFT 588
T
Sbjct: 509 TTAIT 513
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/377 (19%), Positives = 143/377 (37%), Gaps = 74/377 (19%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ LL + + + EAL + + M E +C L D+ + + GQ+ ++KE +L R
Sbjct: 302 YSTLLNMFVENEKFLEALSVISEMKEVNCPL--DLTTCNIMIDVYGQLDMVKEADRLFWR 359
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
MR+ +EP++V YN +L + + +F+ +++ +K +
Sbjct: 360 MRKIG---------------IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNV 404
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY ++ Y + L + +A V++M++RG+ A Y +
Sbjct: 405 VTYNTMIKIYGKTL------------EHEKATNLVQDMQKRGIEPNAITYSTIISIWGKA 452
Query: 410 GRWQDAMLVVEKIKS----------------------LRHSK--------PLEITFTGLI 439
G+ + ++ +K++S + H+K P I T I
Sbjct: 453 GKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNIPRTTAI 512
Query: 440 ISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
G I++ +F+ D E +I M+ ++SRN E+FE + +
Sbjct: 513 TILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEVFE---KMRNV 569
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
G+ P+ + +L A ++ + +Y M GC H +L
Sbjct: 570 GHF----------PNSDVIALVLNAYGKLRDFDTADALYMEMQEEGCVFTDEVHFQMLSL 619
Query: 559 ASRAGKCHLLEHAFDSL 575
LE F+ L
Sbjct: 620 YGARNDYKRLESLFERL 636
>gi|298712109|emb|CBJ32990.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 650
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 145/357 (40%), Gaps = 55/357 (15%)
Query: 201 GDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNL 260
G +G WR+ + +LD + +D L S + Y L+ + K+GR EAL + + ML + +
Sbjct: 34 GARGQWREVLRLLDKMA--EDGIPLNS-YAYNSALSSIAKSGRWREALALRDRMLSE-GV 89
Query: 261 YPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR------------IKNMHRKNWDP 308
D + ++ + G + + V+L+ M R ++N KN
Sbjct: 90 RLDGYTFSALIEACSKGGNVAKGVELLREMVDAGVARDCFSYNAALHGFVRNGDSKNALL 149
Query: 309 VLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+LE PD + Y +L C S +WK + ++R G+ P+A ++
Sbjct: 150 MLEDMVADGVRPDAITYGTLLACCGNSGEWKLCMSLMDRMRSEGITPNAYSF-------- 201
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
L++A +EG+ AV + +ME G + N G+W++A+ +++
Sbjct: 202 ----SPLIKACGKEGRWALAVKTLEDMEASGPTPNEHNWLMAIGACGNAGQWEEALRLID 257
Query: 421 KIKSLR---HSKPLEITFTGLIISSMD-GGHIDDCISIFQHMKDH--CEPNIGTVNAMLK 474
K+++L P+ T I + G D +++ + MK + P+ T + ++
Sbjct: 258 KLEALALGGEGVPMSTTMYNFGIDACARAGRWDQGVALLERMKSNPATPPDAQTYSYLID 317
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
+++ A E L P + Y S + A A QW+
Sbjct: 318 ACAKDANLEDALAYLTEMRAVG-------------LAPTFFAYISAMSAIKVAGQWK 361
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 44/237 (18%), Positives = 97/237 (40%), Gaps = 15/237 (6%)
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
G+ E + + M + G+ + Y + +GRW++A+ + +++ S + T
Sbjct: 37 GQWREVLRLLDKMAEDGIPLNSYAYNSALSSIAKSGRWREALALRDRMLS-EGVRLDGYT 95
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
F+ LI + GG++ + + + M D + + NA L + RN A + E+
Sbjct: 96 FSALIEACSKGGNVAKGVELLREMVDAGVARDCFSYNAALHGFVRNGDSKNALLMLED-- 153
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
+ DG ++PD TY ++L + +W+ + M G + +
Sbjct: 154 ---------MVADG--VRPDAITYGTLLACCGNSGEWKLCMSLMDRMRSEGITPNAYSFS 202
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L+ + G+ L + + +G P+ + + +E+A+ LI+ +
Sbjct: 203 PLIKACGKEGRWALAVKTLEDMEASGPTPNEHNWLMAIGACGNAGQWEEALRLIDKL 259
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 162/407 (39%), Gaps = 73/407 (17%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S F Y +L L K R +A ++F+ M++ N+ P+ Y+++ +VG ++E +
Sbjct: 191 SVFAYNLVLGGLCKVRRIKDARKLFDEMIQR-NMVPNTVTYNTLIDGYCKVGGIEEALGF 249
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
ERM+++ +E +LV YN++LN S + V ++ SG
Sbjct: 250 KERMKEQN---------------VECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFL 294
Query: 347 P-------------SAATYGL------AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
P A GL ++ C +L+ G+I +A + +
Sbjct: 295 PGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYC---ILLNGLCRVGRIEKAEEVLAKL 351
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+ GV + Y L C G + A+L E+++ R +P ITF +I + G
Sbjct: 352 VENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEE-RGLEPNRITFNTVISKFCETGE 410
Query: 448 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
+D + + M + P + T N+++ Y + F + E +E D
Sbjct: 411 VDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEM-------------D 457
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
A +KP+ +Y S++ + E V M G + + +L+EAS C
Sbjct: 458 KAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYN-MLIEAS----CS 512
Query: 567 L--LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
L L+ AF FF EM IQ+ + + LIN +
Sbjct: 513 LSKLKDAFR------------FFDEM-IQSGIDATLVTYNTLINGLG 546
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/414 (19%), Positives = 161/414 (38%), Gaps = 69/414 (16%)
Query: 218 GLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
GL D ++++ Y LL L + GR +A + ++E+ + P +Y+ + Q
Sbjct: 314 GLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVEN-GVTPSKISYNILVNAYCQ 372
Query: 277 VGLLKELVKLIERMRQK---PSKRIKNM------------HRKNW-----DPVLEPDLVV 316
G +K+ + E+M ++ P++ N H + W + + P +
Sbjct: 373 EGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVET 432
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK----------- 365
YN+++N + F ++ K+G+KP+ +YG S CL K
Sbjct: 433 YNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYG----SLINCLCKDRKLIDAEIVL 488
Query: 366 ----------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+L+ A K+ +A M Q G+ T Y L L N
Sbjct: 489 ADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRN 548
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 468
GR + A + ++ + P IT+ LI + C+ ++ MK +P +GT
Sbjct: 549 GRVKKAEDLFLQMAG-KGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGT 607
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
+ ++ + + + K +F+E + + L PD++ Y+ M+ + A
Sbjct: 608 FHPLIYACRKEGVVTMDK-MFQEMLQMD-------------LVPDQFVYNEMIYSYAEDG 653
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+++ M G D+ + L++ R + ++H D + G +P
Sbjct: 654 NVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVP 707
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 141/371 (38%), Gaps = 62/371 (16%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N +L V S ++ VF + SG +P A YG A+++ +LK L + F
Sbjct: 126 NRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQA--AVMLKDLDKGF------ 177
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+++M + G+ + Y + LC R +DA + +++ R+ P +T+
Sbjct: 178 ----ELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQ-RNMVPNTVTYNT 232
Query: 438 LIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
LI G I++ + + MK+ + E N+ T N++L + A+E+ E
Sbjct: 233 LIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEM---- 288
Query: 497 SSGYTFLSG--------------------DGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
G FL G DG ++ DE TY +L + E E V
Sbjct: 289 -EGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEV 347
Query: 537 YKGMALSG---------------CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL----E 577
+ +G CQ K A L E F++++ E
Sbjct: 348 LAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCE 407
Query: 578 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDK 637
GE+ H + +++ V E +LIN + R + L E ++ I +
Sbjct: 408 TGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFV--RCFEFLDEMDKAGIKPNV 465
Query: 638 LE--KLLNALC 646
+ L+N LC
Sbjct: 466 ISYGSLINCLC 476
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 108/264 (40%), Gaps = 37/264 (14%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
++F M QSG+ T L+ GLG G ++A + + G D+ Y L
Sbjct: 520 FRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDV---ITYNSL 576
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK- 293
++ K+ + L +++ M + + P + +H + + G++ + K+ + M Q
Sbjct: 577 ISGYAKSVNTQKCLELYDKM-KILGIKPTVGTFHPLIYACRKEGVVT-MDKMFQEMLQMD 634
Query: 294 --PSKRIKN-----------------MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
P + + N +H++ D ++ D V YN+++ A + + +
Sbjct: 635 LVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIK 694
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
+ ++ GL P TY +L++ + N A R M +RG++
Sbjct: 695 HLVDDMKAKGLVPKVDTY------------NILIKGLCDLKDFNGAYFWYREMVERGLLL 742
Query: 395 TASVYYELACCLCNNGRWQDAMLV 418
S+ Y+L L G ++A +V
Sbjct: 743 NVSMCYQLISGLREEGMLREAQIV 766
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 140/349 (40%), Gaps = 54/349 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L KA A +F M ++ PD+ Y+ LG+ G +KEL L E M
Sbjct: 791 YNSLIDGLLKARLTEMAWGLFYKM-KNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEM 849
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ K P+ + +N V+ V S+ ++ L P+
Sbjct: 850 LFRGCK---------------PNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPW 894
Query: 351 TYGLAMESYRR----------------------C-LLKVLVRAFWEEGKINEAVAAVRNM 387
TYG ++ + C L +L+ F ++G + A R M
Sbjct: 895 TYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRM 954
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+ G+ Y + CLC G+ DA+ E++K L P + + +I
Sbjct: 955 VKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELK-LSGLDPDLVCYNLMINGLGRSQR 1013
Query: 448 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
+++ +S+F M++ P++ T NA++ M +A +++EE L G
Sbjct: 1014 VEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQ---------LKG- 1063
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
L+P+ +TY++++ + + + VYK M + GC+ + A L
Sbjct: 1064 ---LEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 92/467 (19%), Positives = 172/467 (36%), Gaps = 78/467 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ LG + M +L + L + ++ + +T + ILG+AG+ EA I M
Sbjct: 233 LMVALGKRRDIETVMGLLQEMESLGLRPNI---YTFTICIRILGRAGKIDEAYGILKRM- 288
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR---QKPSKRI------KNMHRKNW 306
+D PD+ Y + L G L +L +M+ KP + K +
Sbjct: 289 DDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDL 348
Query: 307 DPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY--- 352
D + E PD+V + +++A + F ++K G+ P+ TY
Sbjct: 349 DAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTL 408
Query: 353 -----------------------GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
GL +Y L + + + G+ +A+ M+
Sbjct: 409 ICGLLRLNRLDEALELFNSMESLGLETTAYTYILF---IDYYGKSGESGKAIKTFEKMKT 465
Query: 390 RGVV-----GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
G+V AS+Y L GR ++A +K + P IT+ L+
Sbjct: 466 NGIVPNIVACNASLY-----SLAEQGRLEEAKEFFNGLKKCGLA-PDAITYNILMRCYGK 519
Query: 445 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
G +DD I + M+++ C+P + +N+++ + D +A ++F+
Sbjct: 520 AGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMK------- 572
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
L P TY+++L + + ++KGM C + LL + G
Sbjct: 573 ------LAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNG 626
Query: 564 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ L + E P L + ++ I ++ A L + M
Sbjct: 627 EVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM 673
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 162/417 (38%), Gaps = 76/417 (18%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQV 277
+K+ + + Y LLA LGK GR EA +F M+ +DC P+ +++++ L +
Sbjct: 568 MKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCP--PNTISFNTLLDCLCKN 625
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G + +K++ RM + PD++ YN V+ + ++ FW+F
Sbjct: 626 GEVDLALKMLFRMTEMNCF---------------PDVLTYNTVIYGLIKENRVNYAFWLF 670
Query: 338 KQLRK---------SGLKPSAATYGLAMESYRRCLLKVLVR--------AFWE------- 373
Q++K L P G +++R + K V +FWE
Sbjct: 671 HQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFR--VAKEFVHHVGDHADGSFWEDLMGGIL 728
Query: 374 -EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI-KSLRHSKPL 431
E +I +++ ++ + SV L LC +G+ DA V K+ KS + L
Sbjct: 729 IEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSL 788
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
E + LI + + +F MK+ C P++ T N L ++ + +L+E
Sbjct: 789 E-AYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYE 847
Query: 491 ET-------------------TRANSSG------YTFLSGDGAPLKPDEYTYSSMLEASA 525
E ++NS Y +SGD P +TY +++
Sbjct: 848 EMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGD---FSPTPWTYGPLIDGLL 904
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ E + ++ M GC + + L+ + G F +++ G P
Sbjct: 905 KLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRP 961
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 155/406 (38%), Gaps = 59/406 (14%)
Query: 222 KRDLKSRFVYTKLLAILG---KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
KR + + K+L I G +A E +R +L N Y I H L + G
Sbjct: 154 KRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVL---NGYSYIGLIH----LLLKSG 206
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+E +K+ RM + K P L Y+A++ A + V + +
Sbjct: 207 FCREALKVYRRMVSEGIK---------------PSLKTYSALMVALGKRRDIETVMGLLQ 251
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
++ GL+P+ T+ + +R GKI+EA ++ M+ G
Sbjct: 252 EMESLGLRPNIYTF------------TICIRILGRAGKIDEAYGILKRMDDAGCGPDVVT 299
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
Y L LCN G+ +A + K+K+ H KP +T+ L+ D G +D + M
Sbjct: 300 YTVLIDALCNAGKLNNAKELFLKMKASSH-KPDRVTYITLLDKFSDHGDLDAIKEFWSEM 358
Query: 459 K-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
+ D P++ T ++ + K E F G + P+ +TY
Sbjct: 359 EADGYLPDVVTFTILIDALCK---VGKVDEAFGTLDVMKKQG----------VAPNLHTY 405
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV--EASRAGKCHLLEHAFDSL 575
++++ ++ + ++ M G L+ T + ++L ++G+ F+ +
Sbjct: 406 NTLICGLLRLNRLDEALELFNSMESLG--LETTAYTYILFIDYYGKSGESGKAIKTFEKM 463
Query: 576 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHIT 618
G +P+ + L Q E+A N + AP IT
Sbjct: 464 KTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAIT 509
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/295 (18%), Positives = 112/295 (37%), Gaps = 27/295 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ P L YN++++ + + + + +F +++ +G P TY L ++
Sbjct: 784 ITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLD------------ 831
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
A + GKI E M RG + + L + A+ + + S S
Sbjct: 832 ALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFS- 890
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+ LI + G +++ F+ M D+ C PN N ++ + + A EL
Sbjct: 891 PTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACEL 950
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F + ++PD +YS M++ + + + ++ + LSG D
Sbjct: 951 FRRMVKEG-------------IRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPD 997
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
+ ++ R+ + FD + G P + +++ + E+A
Sbjct: 998 LVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEA 1052
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 75/189 (39%), Gaps = 48/189 (25%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI------------------ 237
L+ G G +G A + + + DLKS + L +
Sbjct: 934 LMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSG 993
Query: 238 --------------LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
LG++ R EAL +F+ M + + PD+ Y+++ + LG G+++E
Sbjct: 994 LDPDLVCYNLMINGLGRSQRVEEALSLFDEM-RNRGITPDLYTYNALILNLGIAGMVEEA 1052
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
K+ E ++ K LEP++ YNA++ S + V+K++
Sbjct: 1053 GKMYEELQLKG---------------LEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVG 1097
Query: 344 GLKPSAATY 352
G +P+ T+
Sbjct: 1098 GCRPNTGTF 1106
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/437 (19%), Positives = 172/437 (39%), Gaps = 80/437 (18%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + ++ L K G EA +F+ M ++ PD+ ++S+ G+ G L E+ +L+E
Sbjct: 189 FTFNIVIDFLCKEGELAEARSLFSRM-KEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVE 247
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR+ K D+V YNA++N + + + F +++ G+ +
Sbjct: 248 EMRRSGCK---------------ADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMAN 292
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
T+ V AF +EG + EA+ M RG+ Y L C
Sbjct: 293 VVTF------------STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLI---------------------------- 439
GR DA+++++++ +R PL +T+T L+
Sbjct: 341 AGRLDDAIVLLDEM--VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANE 398
Query: 440 --ISSMDGGHI-----DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+++ GH + + + MK+ E +I A+++ +AK L
Sbjct: 399 LLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLL-- 456
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
T+ + SG L+P+ Y++M++A + + + + + SG Q +
Sbjct: 457 -TKMDESG----------LEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVIT 505
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ L+ +AG F+ + + G P+ +T ++ +AV L N M
Sbjct: 506 YCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMV 565
Query: 612 YAPFHITERQWTELFES 628
+ + + +T L +
Sbjct: 566 HKGMSLDKVVYTALLDG 582
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/461 (19%), Positives = 181/461 (39%), Gaps = 77/461 (16%)
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQV- 277
+D+ SR V ++L+A+ RPH A + +L+ L P +A SV TL V
Sbjct: 77 RDRLYAHSRRVLSRLVAL----RRPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVL 132
Query: 278 ---GLLKELVKLIERMRQ---KPSKRIKN-------------MHRKNWDPVLEPDLVVYN 318
GLL + V+ + R+R+ P+ R N + R+ ++ + P++ +N
Sbjct: 133 ADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFN 192
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC---------------- 362
V++ + +F ++++ G P T+ ++ Y +C
Sbjct: 193 IVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRS 252
Query: 363 -------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+ F + G++ A M++ GV+ + C G ++A
Sbjct: 253 GCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREA 312
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLK 474
M + +++ +R E T+T LI + G +DD I + M P N+ T ++
Sbjct: 313 MKLFAQMR-VRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVD 371
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
+ ++A+++ +A ++ +E Y++++ E
Sbjct: 372 GLCKERKVAEAEDVLRMMEKAG-------------VRANELLYTTLIHGHFMNKNSEKAL 418
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD---SLL----EAGEIPHPLFF 587
+ M G +LD + + L+ G C++ H D SLL E+G P+ + +
Sbjct: 419 GLLSEMKNKGLELDISLYGALI-----QGLCNV--HKLDEAKSLLTKMDESGLEPNYIIY 471
Query: 588 TEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
T M+ +A+A++ + + F + L +
Sbjct: 472 TTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDG 512
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 94/226 (41%), Gaps = 31/226 (13%)
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
K++ K + LEP+ ++Y +++AC S + + +++ SG +P+ TY
Sbjct: 453 KSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYC----- 507
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
L+ + G I+EA++ M G+ Y L LC NG +A+ +
Sbjct: 508 -------ALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQL 560
Query: 419 VEKI--KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 475
++ K + K + +T L+ + G++ D ++ M D + ++ +
Sbjct: 561 FNEMVHKGMSLDK---VVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISG 617
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
+ +M +A+E+F E G + PD Y+ ++
Sbjct: 618 FCNLNMMPEAREVFSEMI-------------GHGIAPDRAVYNCLI 650
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 88/447 (19%), Positives = 173/447 (38%), Gaps = 66/447 (14%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
+ + M + G+M + +G R+AM + ++ + + F YT L
Sbjct: 278 YGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQ---MRVRGMALNEFTYTCL 334
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE-----R 289
+ KAGR +A+ + + M+ P ++V V GL KE K+ E R
Sbjct: 335 IDGTCKAGRLDDAIVLLDEMVR--QGVPLNVVTYTVLVD----GLCKER-KVAEAEDVLR 387
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +K R + +Y +++ + + + +++ GL+
Sbjct: 388 MMEKAGVRANEL--------------LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDI 433
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+ YG L++ K++EA + + M++ G+ +Y + +
Sbjct: 434 SLYG------------ALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 468
G+ +A+ +++KI +P IT+ LI G ID+ IS F M+D +PN+
Sbjct: 482 GKVPEAIAMLQKILD-SGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQA 540
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
A++ +N ++A +LF E S D+ Y+++L+
Sbjct: 541 YTALVDGLCKNGCLNEAVQLFNEMVHKGMS-------------LDKVVYTALLDGYLKQG 587
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL-----LEHAFDSLLEAGEIPH 583
+ M SG QLD + + +G C+L F ++ G P
Sbjct: 588 NLHDAFALKAKMIDSGLQLDLFCYTCFI-----SGFCNLNMMPEAREVFSEMIGHGIAPD 642
Query: 584 PLFFTEMLIQAIVQSNYEKAVALINAM 610
+ ++ + N E+A++L + M
Sbjct: 643 RAVYNCLISKYQKLGNLEEAISLQDEM 669
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 66/338 (19%), Positives = 128/338 (37%), Gaps = 35/338 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VLVD L + A+ +R+M ++G+ E L+ G + +A+ +L +
Sbjct: 368 VLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNK 427
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ D+ +Y L+ L + EA + M ++ L P+ Y ++ + G
Sbjct: 428 GLELDIS---LYGALIQGLCNVHKLDEAKSLLTKM-DESGLEPNYIIYTTMMDACFKSGK 483
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ E + +++++ D +P+++ Y A+++ + F +
Sbjct: 484 VPEAIAMLQKI---------------LDSGFQPNVITYCALIDGLCKAGSIDEAISHFNK 528
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+R GL P+ Y LV + G +NEAV M +G+ VY
Sbjct: 529 MRDLGLDPNVQAY------------TALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVY 576
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHM 458
L G DA + K K + L++ +T I + + + +F M
Sbjct: 577 TALLDGYLKQGNLHDAFAL--KAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634
Query: 459 KDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
H P+ N ++ Y + +A L +E R
Sbjct: 635 IGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERV 672
>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
Group]
Length = 506
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 150/386 (38%), Gaps = 85/386 (22%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL AM ++ + G+ + + + F +T +L L R EAL + ++M
Sbjct: 131 LLKGLCADKRTDDAMDIV--LRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMA 188
Query: 256 EDCN-LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+D P++ +Y +V GLLK P K +R+ D + P++
Sbjct: 189 DDGGGCLPNVVSYSTVID-----GLLKG---------GDPDKAYAT-YREMLDRRILPNV 233
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V+Y++++ A V ++ K+G+ P+ TY LV F
Sbjct: 234 VIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTY------------TSLVHGFCSS 281
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI------------ 422
G++ EA+ + M GV Y LC NGR +A + + +
Sbjct: 282 GQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTY 341
Query: 423 KSLRHS----------------------KPLEITFTGLIISSMDGGHIDDCISIFQHMKD 460
SL H +P F LI +S G +D+ + +F M+
Sbjct: 342 SSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQ 401
Query: 461 H-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
+PN T + ++ Y + A LF+E S+G + P+ TY+
Sbjct: 402 QGLKPNCVTYSTLINGYCKITRMENALALFQEMV---SNG----------VSPNFITYNI 448
Query: 520 MLEA------SATAHQWEYFEYVYKG 539
ML+ +ATA ++ Y + + G
Sbjct: 449 MLQGLFRTGRTATAKEF-YVQIIKSG 473
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 102/256 (39%), Gaps = 18/256 (7%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
++ + G ++A A R M R ++ +Y + LC AM V +++
Sbjct: 204 VIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVK-N 262
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
P T+T L+ G + + I + M + EPN+ T ++ + +N ++A
Sbjct: 263 GVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEA 322
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+++F+ + LKPD TYSS+L A ++ M S
Sbjct: 323 RKIFDSMVKRG-------------LKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDM 369
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
Q D L+ +++ GK F + + G P+ + ++ ++ + E A+A
Sbjct: 370 QPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALA 429
Query: 606 LINAM---AYAPFHIT 618
L M +P IT
Sbjct: 430 LFQEMVSNGVSPNFIT 445
>gi|255542990|ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548519|gb|EEF50010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 511
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/453 (19%), Positives = 177/453 (39%), Gaps = 95/453 (20%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+++D LS+ +W+ + M+Q+ L L L++ L G RQA+ D +
Sbjct: 108 LIIDILSKVRQFDVSWQLIIQMDQNNLQPNSHTFLILIRRLISAGFTRQAIRAFDDMESF 167
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ ++ F + LL L K G A+ +FN P++ Y + ++G
Sbjct: 168 IAETVNQTHFCF--LLDTLCKYGYIKVAVEVFNK--RKFRFLPNVRIYTVLIYGWCKIGR 223
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV------PSHQWKGV 333
+ + I M + +E ++V YN +L+ P +++
Sbjct: 224 IDMAERFIREMDEMG---------------IEANVVTYNVLLDGICRRAKLQPEGRFERT 268
Query: 334 FW----VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
VF ++R+ G++P ++ + + Y R K V ++ ME+
Sbjct: 269 IMKADKVFDEMRQKGIEPDVTSFSILLHVYSR------------AHKPQLTVDKLKLMEE 316
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHI 448
G+ T + Y + CLC+ GR DA ++E++ +R+ P T+
Sbjct: 317 MGICPTVATYTSVLKCLCSCGRIDDAEELLEQM--VRNGVSPNAATYNCFFKEYRGRKDP 374
Query: 449 DDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
+ + +++ ++ C+P++ T N +L ++ + + F+ E++ + R++ SG
Sbjct: 375 ETALKLYRKIRQENLCDPSVHTYNILLGMFMKLNRFNIVNEIWND-LRSSGSG------- 426
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
PD +Y+ ++ +W+ CQ
Sbjct: 427 -----PDLDSYTLLVHGLCEKQKWQ-----------KACQF------------------- 451
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
F ++E G +P F EML ++QSN
Sbjct: 452 -----FVEMIEKGLLPQKATF-EMLYAGLIQSN 478
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/404 (20%), Positives = 148/404 (36%), Gaps = 52/404 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ + + GR EA + L++E PD+ +Y +V + G L ++ KLIE M
Sbjct: 692 YNIVIHFVCQLGRIKEAHHLL-LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++K L+P+ +Y +++ + F ++ + G+ P
Sbjct: 751 KRKG---------------LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 795
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
Y L+ F + G I A M R + Y + C G
Sbjct: 796 VY------------TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 843
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
+A + ++ + +P +TFT LI GH+ D + HM + C PN+ T
Sbjct: 844 DMVEAGKLFHEM-FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 902
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTF--------------------LSG--DG 507
++ + A EL E + F L G +
Sbjct: 903 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 962
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
A L D TY+++++A + + + + + K M G Q L+ G
Sbjct: 963 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 1022
Query: 568 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
E + +L G P+ F ++ Q +++N + A A+ M
Sbjct: 1023 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 1066
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 114/289 (39%), Gaps = 43/289 (14%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+T+L+ KAG +A R+ N M++ C+ P++ Y ++ L + G L +L+
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCS--PNVVTYTTLIDGLCKEGDLDSANELLHE 924
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M W L+P++ YN+++N S + + + +GL
Sbjct: 925 M---------------WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 969
Query: 350 ATYGLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRN 386
TY M++Y + VL+ F G + + +
Sbjct: 970 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1029
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
M +G+ A+ + L C + A + + + S R P T+ L+
Sbjct: 1030 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS-RGVGPDGKTYENLVKGHCKAR 1088
Query: 447 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
++ + +FQ MK ++ T + ++K + + F +A+E+F++ R
Sbjct: 1089 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 1137
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 93/475 (19%), Positives = 167/475 (35%), Gaps = 112/475 (23%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLML--------EDCNLY-------------------- 261
V+ +L G EA R+F ML + CN+Y
Sbjct: 620 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 679
Query: 262 -P------DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
P ++A+Y+ V + Q+G +KE L+ M K PD+
Sbjct: 680 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG---------------YTPDV 724
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+ Y+ V+N + V+ + + +++ GLKP++ YG ++ +L R
Sbjct: 725 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG--------SIIGLLCRI---- 772
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
K+ EA A M ++G++ VY L C G + A ++ S R P +T
Sbjct: 773 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS-RDITPDVLT 831
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
+T +I S F + D E A +LF E
Sbjct: 832 YTAII-------------SGFCQIGDMVE---------------------AGKLFHEM-- 855
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
F G L+PD T++ ++ A + V+ M +GC + +
Sbjct: 856 -------FCKG----LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 904
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAP 614
L+ + G + + G P+ + ++ N E+AV L+ A
Sbjct: 905 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 964
Query: 615 FHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA--LHAL 667
+ +T L ++ DK +++L + + +T + L LH +
Sbjct: 965 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 1019
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 39/281 (13%)
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+F ++ K G + + TY + + Y R ++ K++ A+ + M++ G
Sbjct: 4 LFYRMMKDGCEATVVTYTVIIHGYLR-----------QKSKLDHALRLLEVMKESGKKPD 52
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
+Y L L N+GR + A +++ +K + S L +T+T LI + G + DC +F
Sbjct: 53 EILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANL-VTYTNLIKEYANTGRLQDCRKLF 111
Query: 456 QHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG--YTF---------- 502
Q MKD E PN T NA+++ Y R +F +A EL++E + +T+
Sbjct: 112 QEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKR 171
Query: 503 ------------LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ G P PD+ TY+++L+ A + + + M +G + +
Sbjct: 172 GLLEDMERLLDEMDTKGVP--PDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIW 229
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ +L A + F++L G +P+ + ++ ML
Sbjct: 230 TYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAML 270
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 149/373 (39%), Gaps = 46/373 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+Y L+ L +GR A +I + M D + ++ Y ++ G L++ KL +
Sbjct: 54 ILYNCLVNGLVNSGRLEAAEKILDDMKRD-KVSANLVTYTNLIKEYANTGRLQDCRKLFQ 112
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M+ K P+ YNA++ +K ++ ++ G
Sbjct: 113 EMKDKGES---------------PNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKD 157
Query: 349 AATYGLAMESY-RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
TY +A+ Y +R LL+ + R E M+ +GV Y L
Sbjct: 158 VHTYNIAIAMYGKRGLLEDMERLLDE-------------MDTKGVPPDQVTYNTLLDVYA 204
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
+ A ++ ++ + +P T+ ++ S+ + + +F+++K PNI
Sbjct: 205 KKSYFVKAHEILREMTEAGY-RPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNI 263
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T +AML +Y R+ ++++A +L++E A P YS ++E+
Sbjct: 264 VTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCI-------------PCIIAYSGLIESYGH 310
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
++ ++ M SG D + L+ +AG+C E + + + G +P +
Sbjct: 311 HGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGIT 370
Query: 587 FTEMLIQAIVQSN 599
+ +L++A +
Sbjct: 371 YG-ILVRAFANAG 382
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 28/159 (17%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
LK K + + Y+ +L++ G+ G EA ++++ M+E P I AY + + G G
Sbjct: 254 LKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIE-AGCIPCIIAYSGLIESYGHHG 312
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ +E + + MR+ + PD +Y A+++A + + + ++
Sbjct: 313 MYQEALACFQDMRKSG---------------IVPDTKIYTALMDAYGKAGRCREAELLYF 357
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
++ K G P TYG +LVRAF G++
Sbjct: 358 EMTKEGFVPDGITYG------------ILVRAFANAGRL 384
>gi|302784186|ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
gi|300158197|gb|EFJ24820.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
Length = 616
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 152/404 (37%), Gaps = 61/404 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
FV + L+ + K G E+ +F+ DC + D+ ++S+ V Q G +E ++L +
Sbjct: 203 FVDSALVTMFAKCGSLKESREVFD----DCR-WKDVLFWNSMIVAYSQSGHPREAIELFK 257
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M P +EP+ + Y VL AC + V +Q+ +G +
Sbjct: 258 SMGSS-------------SPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFD 304
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV---GTASVYYELACC 405
AA + Y +C G I EA M+QR VV G S Y
Sbjct: 305 AAAENSLVNMYAKC------------GSITEAREVFDGMKQRTVVSWTGIISAY------ 346
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EP 464
G ++A+ + K+ S +P ITF ++ + G +++ ++ MK +P
Sbjct: 347 -VRKGHPREALDLYRKMGS-EGVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKP 404
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
++ NA++ +Y + A+++F+ N +T +M+ A
Sbjct: 405 DLAVANALVSLYGKCGSVDSARKVFDRMKIRNVVSWT-----------------AMISAY 447
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
A E +YK M L G Q + +L S+AG H F L + P
Sbjct: 448 AHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQAGLLESARHYFGCLTR--DCGAP 505
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
+ + A V + +A PF W L +
Sbjct: 506 AKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWMGLLAA 549
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 141/317 (44%), Gaps = 49/317 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL-LKELVKLI 287
+ ++ +++ G++G +EA++IF M +D L P++ Y++V G+ G+ K ++++
Sbjct: 113 YAFSAIISAYGRSGYCNEAIKIFYSM-KDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIF 171
Query: 288 ERMRQ---KPSKRIKN----MHRKN--WDPV-----------LEPDLVVYNAVLNACVPS 327
+ M + +P + N + K W+ ++ D+ YN +L+A
Sbjct: 172 DEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKG 231
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
Q F + ++ + P+ TY ++ Y + G++++A M
Sbjct: 232 GQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKA------------GRLDDARNLFNEM 279
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+ G+ Y L GR+++AM V ++++ K + +T+ L+
Sbjct: 280 KFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDV-VTYNALLGGYGKQYK 338
Query: 448 IDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
D +F+ MK H PN+ T + ++ VYS+ ++ +A ++F E +A
Sbjct: 339 YDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAG---------- 388
Query: 507 GAPLKPDEYTYSSMLEA 523
LK D YS++++A
Sbjct: 389 ---LKADVVLYSALIDA 402
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 82/197 (41%), Gaps = 21/197 (10%)
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDM-FSKAKELFEET 492
F+ +I + G+ ++ I IF MKD+ +PN+ T NA++ + + F + E+F+E
Sbjct: 115 FSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEM 174
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
R ++PD T++S+L + WE + M G D +
Sbjct: 175 LRNG-------------MQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTY 221
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
LL + G+ L+ AF+ + E +P+ + ++ M+ + A L N
Sbjct: 222 NTLLDAVCKGGQ---LDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNE 278
Query: 610 MAYAPFHITERQWTELF 626
M + + + L
Sbjct: 279 MKFLGISLDRVSYNTLL 295
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 93/218 (42%), Gaps = 29/218 (13%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK 281
K L + Y+ ++ KAGR +A +FN M + + D +Y+++ ++G +
Sbjct: 247 KNILPNVVTYSTMIDGYAKAGRLDDARNLFNEM-KFLGISLDRVSYNTLLSIYAKLGRFE 305
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
E + + M ++ D+V YNA+L +++ V VF++++
Sbjct: 306 EAMDVCREMENSGIRK---------------DVVTYNALLGGYGKQYKYDVVRKVFEEMK 350
Query: 342 KSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
+ P+ TY L+ + + G EA+ R ++ G+ +Y
Sbjct: 351 ARHVSPNLLTY------------STLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSA 398
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
L LC NG + A+ +++++ +P +T+ +I
Sbjct: 399 LIDALCKNGLVESAVSLLDEMTK-EGIRPNVVTYNSII 435
Score = 42.7 bits (99), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 60/320 (18%), Positives = 134/320 (41%), Gaps = 41/320 (12%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES-------YRRCL--LKVL 367
++A+++A S +F ++ GLKP+ TY +++ ++R L +
Sbjct: 115 FSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEM 174
Query: 368 VR--------------AFWEEGKINEAVAAVR-NMEQRGVVGTASVYYELACCLCNNGRW 412
+R A +G + EA ++ M RG+ Y L +C G+
Sbjct: 175 LRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQL 234
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNA 471
A ++ ++ + ++ P +T++ +I G +DD ++F MK + + N
Sbjct: 235 DMAFEIMSEMPA-KNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNT 293
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
+L +Y++ F +A ++ E + + ++ D TY+++L ++++
Sbjct: 294 LLSIYAKLGRFEEAMDVCREM-------------ENSGIRKDVVTYNALLGGYGKQYKYD 340
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
V++ M + ++ L+ S+ G F +AG + ++ L
Sbjct: 341 VVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSA-L 399
Query: 592 IQAIVQSN-YEKAVALINAM 610
I A+ ++ E AV+L++ M
Sbjct: 400 IDALCKNGLVESAVSLLDEM 419
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 21/154 (13%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R Y LL+I K GR EA+ + M E+ + D+ Y+++ G+ + K+
Sbjct: 288 RVSYNTLLSIYAKLGRFEEAMDVCREM-ENSGIRKDVVTYNALLGGYGKQYKYDVVRKVF 346
Query: 288 ERMRQK---PS-----------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
E M+ + P+ + ++ R+ L+ D+V+Y+A+++A +
Sbjct: 347 EEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKN 406
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
+ + ++ K G++P+ TY ++++ R
Sbjct: 407 GLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 440
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/322 (19%), Positives = 135/322 (41%), Gaps = 33/322 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P + +N +L + + +F ++ ++R +GL P T L +L
Sbjct: 89 PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFT------------LSILANCL 136
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+++EA+AA+ + +RG + Y L LC R +A + +++ L + P
Sbjct: 137 CNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT-PN 195
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKD-------HCEPNIGTVNAMLKVYSRNDMFSK 484
+T+ LI G+++ + + + M + +C+P + T + ++ + +
Sbjct: 196 AVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDE 255
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
AKELFEE + G + PD +YS+++ A +W+ ++++ M G
Sbjct: 256 AKELFEE-----------MKAQG--MIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQG 302
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
Q D + L+ + GK + + +++ G +P+ + + ++ + + A
Sbjct: 303 VQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAR 362
Query: 605 ALINAMAYAPFHITERQWTELF 626
L +M E +T L
Sbjct: 363 ELFLSMPSKGLEPDEISYTTLI 384
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 142/337 (42%), Gaps = 46/337 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G W Q+ + D + + D+ + ++ L+ L K G+ EA ++ +M+
Sbjct: 278 LIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVT---FSVLIDTLCKEGKVTEAKKLLEVMI 334
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + P++ Y+S+ VG L +L M PSK LEPD +
Sbjct: 335 QR-GIVPNLITYNSLIDGFCMVGDLNSARELFLSM---PSKG------------LEPDEI 378
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y ++N + + K ++ ++ + G P+ TYG L++ +++G
Sbjct: 379 SYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYG------------TLLKGLFQKG 426
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
K+ +A M+ GV + +Y LC N +AM + ++KS +E +
Sbjct: 427 KVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIE-NY 485
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
+ LI G ++ +F+ + ++ +P++ T N M+ + + A LFE +
Sbjct: 486 SCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFE---K 542
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
+G T PD Y+++L ++ E
Sbjct: 543 MEENGCT----------PDIIAYNTLLCGFCEGNKLE 569
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/286 (18%), Positives = 110/286 (38%), Gaps = 42/286 (14%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
VL+D L + + K + +M Q G+ + T ++ +GD S R+
Sbjct: 312 VLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARE------LF 365
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
+ K YT L+ K + EA+ ++N ML+ P++ Y ++ L Q
Sbjct: 366 LSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQ-VGKSPNVTTYGTLLKGLFQ 424
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV-------------------- 316
G + + KL M+ ++ D + + D +
Sbjct: 425 KGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIEN 484
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGK 376
Y+ +++ + + + + +F++L + GL+P TY +++ F + G+
Sbjct: 485 YSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTY------------NIMIHGFCKVGQ 532
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
++ A ME+ G Y L C C + ++ + ++ K+
Sbjct: 533 VDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKM 578
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 101/264 (38%), Gaps = 41/264 (15%)
Query: 172 AKNWKFVRIMNQSGLMFTEGQMLK------LLKGLGDKGSWRQAMSVLDWV--YGLKDKR 223
K WK MN M G+ LLKGL KG A + + YG+
Sbjct: 388 CKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANS 447
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
+Y L L K EA+ +FN L+ N +I Y + L + G L+
Sbjct: 448 Q-----IYGIFLDGLCKNDCLFEAMELFN-ELKSYNFKLNIENYSCLIDGLCKAGKLETA 501
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+L E++ Q+ L+PD+V YN +++ Q +F+++ ++
Sbjct: 502 WELFEKLSQEG---------------LQPDVVTYNIMIHGFCKVGQVDNANILFEKMEEN 546
Query: 344 GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
G P Y L+ F E K+ E + + M Q+ V A+ +
Sbjct: 547 GCTPDIIAY------------NTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVV 594
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRH 427
LC + +++ + ++ K RH
Sbjct: 595 DMLCKDEKYKKFVDLLPKFPVQRH 618
>gi|298705454|emb|CBJ28729.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 745
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 150/368 (40%), Gaps = 51/368 (13%)
Query: 160 VLVDRLSEREMTAKNWKFV-----RIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLD 214
VLV R RE W+ V + ++GL+ T +++ L G W M L+
Sbjct: 412 VLVMRAFGRE---GRWRTVIDLMGSLKEEAGLVPTVSSYNVVIEALAKAGEW---MKALE 465
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
+ +K +R + F Y++ +A K+G L + M E +L PD + + V
Sbjct: 466 MLAEMKQERVRPTEFTYSRCMAACEKSGEWERTLLLLADMKEQEDLVPDSYIFSTAMVAC 525
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G L +++ +++ MR+ + P+LV+YN + +C + W +
Sbjct: 526 SKAGRLDDVLGILQEMREMSATS-------------GPNLVLYNIAIGSCARARDWPRML 572
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
++R+ ++P +T+ +++ R G + A+ + M + G+
Sbjct: 573 EEMDRMRREDIEPEESTFAAPLDTCGR------------TGNLPMALELLDRMREDGIKP 620
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
Y + C G A L+++++++ H P E T+ ++ +G + D I +
Sbjct: 621 GVVTYGYVVAAACRAGERTSAALLLDEMEAAGH-PPNERTYGVAALACREGNNADAAIDL 679
Query: 455 FQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 513
+ + P+ ++ ++ S + EL E S+G++ PD
Sbjct: 680 LRRRQMQGLPPDALILSCAVQACSNAGNMQRGLELITEM---KSAGFS----------PD 726
Query: 514 EYTYSSML 521
Y S++
Sbjct: 727 RAFYHSVI 734
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 87/483 (18%), Positives = 170/483 (35%), Gaps = 98/483 (20%)
Query: 175 WKFVRIMNQS-----GLMFTEGQMLKLLKGLGDKGSWRQAMSVLD--WVYGLKDKRDLKS 227
W + +++Q +M G M + G WR A+S+L+ GL+ +
Sbjct: 246 WGALALLDQDDGLPRSVMLRTGAM----QACSGAGEWRAALSILEDMQAEGLR-----PN 296
Query: 228 RFVYTKLLAILGKAGRPHEALRIFN--LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
Y + + G AL + + LM + AA+H G G +E
Sbjct: 297 GAAYVAAMEACARGGVMDLALELLDRVLMFHPRDERTVTAAFHGAIKACGNGGQWEEATS 356
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ---------------- 329
L++RMRQ + + YNA + AC + Q
Sbjct: 357 LLQRMRQDSLAVVTSRE--------------YNAAIMACCRAQQSVAALTLLGDMSVESE 402
Query: 330 ---------------------WKGVFWVFKQLR-KSGLKPSAATYGLAMESYRRCLLKVL 367
W+ V + L+ ++GL P+ ++Y V+
Sbjct: 403 HCSADETSYVLVMRAFGREGRWRTVIDLMGSLKEEAGLVPTVSSY------------NVV 450
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
+ A + G+ +A+ + M+Q V T Y +G W+ +L++ +K
Sbjct: 451 IEALAKAGEWMKALEMLAEMKQERVRPTEFTYSRCMAACEKSGEWERTLLLLADMKEQED 510
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE---PNIGTVNAMLKVYSRNDMFSK 484
P F+ +++ G +DD + I Q M++ PN+ N + +R + +
Sbjct: 511 LVPDSYIFSTAMVACSKAGRLDDVLGILQEMREMSATSGPNLVLYNIAIGSCARARDWPR 570
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
E + R + ++P+E T+++ L+ + M G
Sbjct: 571 MLEEMDRMRRED-------------IEPEESTFAAPLDTCGRTGNLPMALELLDRMREDG 617
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
+ + +++ A RAG+ D + AG P+ + + +N + A+
Sbjct: 618 IKPGVVTYGYVVAAACRAGERTSAALLLDEMEAAGHPPNERTYGVAALACREGNNADAAI 677
Query: 605 ALI 607
L+
Sbjct: 678 DLL 680
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 155/362 (42%), Gaps = 46/362 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G R A+ +L V G + ++ +Y+ ++ + K ++A +++ M+
Sbjct: 168 LIHGLCKVGETRAALDLLRRVDGNLVQPNV---VMYSTIIDGMCKDKHVNDAFDLYSEMV 224
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P++ Y ++ VG LK+ + L +M ++N ++PD+
Sbjct: 225 SK-GISPNVVTYSALISGFFTVGQLKDAIDLFNKMI------LEN---------IKPDVY 268
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+N +++ + K VF + K G+KP+ TY M+ Y CL+K
Sbjct: 269 TFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY--CLVK---------- 316
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
++N+A + + M QRGV Y L C + +AM + +++ +H P +T+
Sbjct: 317 EVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHH-KHIIPDVVTY 375
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
LI G I + + M D P+I T +++L +N KA L T+
Sbjct: 376 NSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALL---TK 432
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
G ++P+ YTY+ +++ + E +++ + + G + +
Sbjct: 433 LKDQG----------IRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTV 482
Query: 555 LL 556
++
Sbjct: 483 MI 484
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ K + EA+ +F M ++ PD+ Y+S+ L ++G + +KL++ M
Sbjct: 340 YNILIDGFCKIKKVDEAMNLFKEMHHK-HIIPDVVTYNSLIDGLCKLGKISYALKLVDEM 398
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
D + PD++ Y+++L+A +HQ + +L+ G++P+
Sbjct: 399 H---------------DRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMY 443
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY +L+ + G++ +A ++ +G T + Y + CN G
Sbjct: 444 TY------------TILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKG 491
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
+ +A+ ++ K+K P +T+ +I S D
Sbjct: 492 LFDEALALLSKMKD-NSCIPDAVTYEIIIRSLFD 524
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 102/235 (43%), Gaps = 29/235 (12%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PDI +Y+ + ++ + E + L K MH K+ + PD+V YN+++
Sbjct: 335 PDIQSYNILIDGFCKIKKVDEAMNLF-----------KEMHHKH----IIPDVVTYNSLI 379
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
+ + + ++ G+ P TY ++ A + ++++A+
Sbjct: 380 DGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILD------------ALCKNHQVDKAI 427
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
A + ++ +G+ Y L LC GR +DA + E + ++ + T+T +I
Sbjct: 428 ALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVN-TYTVMIHG 486
Query: 442 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
+ G D+ +++ MKD+ C P+ T +++ D KA++L E TR
Sbjct: 487 FCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMITRG 541
>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
Length = 649
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/383 (18%), Positives = 149/383 (38%), Gaps = 66/383 (17%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ Y ++ + G + + + L+ M + +P+ V YNA L
Sbjct: 258 PDVVIYSTLINGFSEQGHVDQALDLLNTM------------------LCKPNTVCYNAAL 299
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL----------------- 364
+ +W+ + + ++ + G P+ AT+ + + S + L
Sbjct: 300 KGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCE 359
Query: 365 ------KVLVRAFWEEGKINEAVAAVRNMEQR-GVVGTASVYYELACCLCNNGRWQDAML 417
+++ + E G++++A+ + +M + +G +V C RW DA
Sbjct: 360 PDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKG----FCRAERWHDASE 415
Query: 418 VVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 475
++ ++ R PL E+TF LI G ++ +F+ M + C P+I T +++L
Sbjct: 416 LIAQM--FRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNG 473
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
+S + A +LF P KPD ++Y+++L+ A +WE
Sbjct: 474 FSEQGLVEVAIQLFRSM----------------PCKPDIFSYNAVLKGLCRAARWEDAGE 517
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
+ M C ++ L+ + G + + G P + ++
Sbjct: 518 LIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFS 577
Query: 596 VQSNYEKAVALINAMAYAPFHIT 618
Q + A+ L++ M+ P I+
Sbjct: 578 EQGRLDDALKLLSTMSCKPDAIS 600
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 141/337 (41%), Gaps = 56/337 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ L + GR +ALR+ N M+ PD +++V LK + ER
Sbjct: 365 YNIIINSLSERGRVDDALRLLNSMV----CKPDALGFNAV---------LKGFCR-AERW 410
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
S+ I M R + P++E + +N +++ + VF+Q+ + P
Sbjct: 411 HDA-SELIAQMFRDDC-PLIE---MTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIV 465
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY L+ F E+G + A+ R+M + + + Y + LC
Sbjct: 466 TY------------SSLLNGFSEQGLVEVAIQLFRSMPCKPDIFS---YNAVLKGLCRAA 510
Query: 411 RWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 468
RW+DA L+ E + + P E+TF LI S G +D I + + M ++ P+I T
Sbjct: 511 RWEDAGELIAEMVG--KDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFT 568
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
NA++ +S A +L + KPD +Y+S L+ A
Sbjct: 569 YNALINGFSEQGRLDDALKLLSTMS----------------CKPDAISYNSTLKGLCRAE 612
Query: 529 QWEYFEYVYKGMALSGCQLDQT--KHAWLLVEASRAG 563
+W+ E + M + C ++ K+A L+ +RAG
Sbjct: 613 RWQDAEELVAEMLRNKCTPNEVTFKYANHLLMPNRAG 649
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/331 (18%), Positives = 120/331 (36%), Gaps = 48/331 (14%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-------- 361
+ PD YN VL + +W+ + ++ ++ P+ T+ + S+ +
Sbjct: 186 VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 245
Query: 362 ---------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-C 405
+ L+ F E+G +++A+ + M + +V Y A
Sbjct: 246 QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM----LCKPNTVCYNAALKG 301
Query: 406 LCNNGRWQD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CE 463
LC RW+D L+ E ++ + P E TF+ LI S +D + + + M+ + CE
Sbjct: 302 LCIAERWEDIGELMAEMVR--KGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCE 359
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
P+ N ++ S A L KPD ++++L+
Sbjct: 360 PDTVNYNIIINSLSERGRVDDALRLLNSMV----------------CKPDALGFNAVLKG 403
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
A +W + M C L + L+ + G + F+ + P
Sbjct: 404 FCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPD 463
Query: 584 PLFFTEMLIQAIVQSNYEKAVALINAMAYAP 614
+ ++ +L Q E A+ L +M P
Sbjct: 464 IVTYSSLLNGFSEQGLVEVAIQLFRSMPCKP 494
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 140/381 (36%), Gaps = 43/381 (11%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ + + GR +EA + L++E PD+ +Y +V + G L ++ KLIE+M
Sbjct: 672 YNIVIHFVCQLGRINEAHHLL-LLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+QK L+P+ Y +++ + F ++ G+ P
Sbjct: 731 KQKG---------------LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTI 775
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
Y LV F + G I A M R + Y + C G
Sbjct: 776 VY------------TTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 823
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
+A + ++ R +P ITFT L+ GHI D + HM + C PN+ T
Sbjct: 824 DMVEAGKLFHEMLC-RGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTY 882
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
++ + A EL E + L+P+ +TY+S++ +
Sbjct: 883 TTLIDGLCKEGDLDSANELLHEMWKIG-------------LQPNIFTYNSIVNGLCKSGN 929
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
E + +G D + L+ ++G+ + +L G P + F
Sbjct: 930 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNV 989
Query: 590 MLIQAIVQSNYEKAVALINAM 610
++ + E L+N M
Sbjct: 990 LMNGFCLHGMLEDGEKLLNWM 1010
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/410 (19%), Positives = 156/410 (38%), Gaps = 61/410 (14%)
Query: 173 KNWKFVRIMNQSGLM---FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF 229
K WK + M Q GL +T G ++ LL + +A S + + L
Sbjct: 722 KVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFS------EMIGQGILPDTI 775
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VYT L+ K G A + F M ++ PD+ Y ++ Q+G + E KL
Sbjct: 776 VYTTLVDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 834
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + LEPD++ + ++N + K F V + ++G P+
Sbjct: 835 MLCRG---------------LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNV 879
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L+ +EG ++ A + M + G+ Y + LC +
Sbjct: 880 VTY------------TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 927
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
G ++A+ +V + ++ + +T+T L+ + G +D I M +P I T
Sbjct: 928 GNIEEAVKLVGEFEAAGLNAD-TVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVT 986
Query: 469 VNAMLKVYSRNDMFSKAKELF--------------------EETTRANSSGYTFLSGDGA 508
N ++ + + M ++L + R N T + D
Sbjct: 987 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMC 1046
Query: 509 P--LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
++PD TY ++++ A + ++++ M G + + ++ L+
Sbjct: 1047 SRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1096
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 143/385 (37%), Gaps = 67/385 (17%)
Query: 83 KPWERIERLKFRQLASESKEFA---GDNLKRENLRELKEMFEKDLN-WVLDDDVQLGS-- 136
K W+ IE++K + L S + G + L E +E F + + +L D + +
Sbjct: 722 KVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLV 781
Query: 137 DYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRI--MNQSGLMFTEG--- 191
D F K + ++ E + + D L+ TA F +I M ++G +F E
Sbjct: 782 DGFCKRGDIRAASKFFYEMHSRDITPDVLT---YTAIISGFCQIGDMVEAGKLFHEMLCR 838
Query: 192 -------QMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
+L+ G G + A V + + ++ + YT L+ L K G
Sbjct: 839 GLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVT---YTTLIDGLCKEGDL 895
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
A + + M + L P+I Y+S+ L + G ++E VKL+
Sbjct: 896 DSANELLHEMWK-IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG---------- 944
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCL- 363
L D V Y +++A S + + ++ GL+P+ T+ + M + CL
Sbjct: 945 -----LNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGF--CLH 997
Query: 364 ------------------------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
LV+ + + A A ++M RGV Y
Sbjct: 998 GMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTY 1057
Query: 400 YELACCLCNNGRWQDAMLVVEKIKS 424
L CN ++A + +++K
Sbjct: 1058 ENLVKGHCNARNMKEAWFLFQEMKG 1082
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 151/373 (40%), Gaps = 49/373 (13%)
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
+ + A +++D L + + + + M Q G+ + ++ G G +AM
Sbjct: 253 KPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMD 312
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA 271
VL+ V+ L + FV+ ++ L G +A ++F M E L PD +Y ++
Sbjct: 313 VLE-VFNLS-----PNIFVFNSFISKLCTDGNMLKAAKVFQDMCE-MGLIPDCFSYTTMM 365
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
+V + +K + +M ++ + P + Y ++++C +
Sbjct: 366 AGYCKVKDISNALKYLGKMLKRG---------------IRPSVATYTLLIDSCCKPGNME 410
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
++F+++ GL P +Y M Y + +G + +A + M G
Sbjct: 411 MAEYLFQRMITEGLVPDVVSYNTLMNGYGK------------KGHLQKAFELLSMMRSAG 458
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
V Y L L G +A +++++ R P +TFT +I + G+ ++
Sbjct: 459 VSPDLVTYNILIHGLIKRGLVNEAKDILDELTR-RGFSPDVVTFTNIIGGFSNKGNFEEA 517
Query: 452 ISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 510
+F +M +H EP++ T +A+L Y R ++A LF + A L
Sbjct: 518 FLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAG-------------L 564
Query: 511 KPDEYTYSSMLEA 523
K D Y+S++
Sbjct: 565 KADVILYNSLIHG 577
>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
Length = 674
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 149/376 (39%), Gaps = 52/376 (13%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN------WDPVLE---- 311
PD+ Y ++ + G + + +KL+ M +P+ N K WD V E
Sbjct: 287 PDVVIYSTLVNGFSEHGRVDDALKLLSTMLCRPNTVCYNAALKGLCIAGRWDEVGELIAE 346
Query: 312 -------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL 364
P+ ++ ++N+ + + V +Q++K G P +Y
Sbjct: 347 MVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSY------------ 394
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIK 423
++ F E+ ++A+ + +M + T S L C LC RW DA L+ + +K
Sbjct: 395 NTIISCFSEQACADDALKLLNSMLCKP--DTISFNAVLKC-LCRAERWYDAAELMAKMLK 451
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMF 482
H+ E+TF LI S G + D I +F+ M K C P+I T ++++ +S +
Sbjct: 452 EDCHTN--EMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLD 509
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
A +LF P + D ++Y++ L+ A +W+ + M
Sbjct: 510 KVAFDLFRSM----------------PCRADIFSYNATLKGLCMAARWDDAGELIADMVT 553
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
C ++ L+ + G + ++ + + G P + ++ Q +
Sbjct: 554 KDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDD 613
Query: 603 AVALINAMAYAPFHIT 618
A+ ++ M P I+
Sbjct: 614 ALKFLSTMPCEPDTIS 629
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 146/382 (38%), Gaps = 66/382 (17%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
LKGL G W + V + + + K + ++ L+ L + A+ + M +
Sbjct: 328 LKGLCIAGRWDE---VGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQM-Q 383
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
PD+ +Y+++ + + +KL+ M + +PD +
Sbjct: 384 KYGYMPDVVSYNTIISCFSEQACADDALKLLNSM------------------LCKPDTIS 425
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY----------------- 359
+NAVL + +W + ++ K + T+ + ++S
Sbjct: 426 FNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMP 485
Query: 360 -RRCLLKV-----LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
RC + L+ F E+G A R+M R + + + + LC RW
Sbjct: 486 KYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRADIFSYNATLKG---LCMAARWD 542
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAM 472
DA ++ + + + P E+TF LI S G ++ I +++ M + P+I T NA+
Sbjct: 543 DAGELIADMVT-KDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNAL 601
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
+ YS A + FLS P +PD +Y+S+L+ A +W+
Sbjct: 602 INGYSEQGCLDDALK--------------FLST--MPCEPDTISYNSILKGLCRAERWKD 645
Query: 533 FEYVYKGMALSGCQLDQTKHAW 554
E + M C ++ +
Sbjct: 646 AEKLVTEMLRKNCTPNEVTFKY 667
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 94/244 (38%), Gaps = 42/244 (17%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ PD YN VL + QW+ + +++ ++ P+ T+ +R
Sbjct: 215 VAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQ------------IR 262
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
AF + G ++ AV + M + G + +Y L +GR DA+ K+ S +
Sbjct: 263 AFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDAL----KLLSTMLCR 318
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P + + + G D+ + M + C PN T + ++ +N + A E+
Sbjct: 319 PNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEV 378
Query: 489 FEETTRANSSGY--------TFLSG--------------DGAPLKPDEYTYSSMLEASAT 526
E+ + GY T +S + KPD +++++L+
Sbjct: 379 LEQMQK---YGYMPDVVSYNTIISCFSEQACADDALKLLNSMLCKPDTISFNAVLKCLCR 435
Query: 527 AHQW 530
A +W
Sbjct: 436 AERW 439
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 102/261 (39%), Gaps = 42/261 (16%)
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPN 465
LC R DA V+E +K+ + ++ L+ G + D + + + N
Sbjct: 129 LCARRRLADAERVLEALKTSGAAD--AVSHNTLVAGYCRDGSLWDAERVLEAARASGAAN 186
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T A++ Y R+ + A L P+ PD YTY+++L+
Sbjct: 187 VVTYTALIDGYCRSGRLTDALRLIASM----------------PVAPDTYTYNTVLKGLC 230
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA----GEI 581
A QWE E + + M + C ++ A + + G LL+ A + LLE G +
Sbjct: 231 FAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNG---LLDRAVE-LLEQMPKYGCM 286
Query: 582 PHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITER----------QWTELFESNED 631
P + ++ ++ + A+ L++ M P + +W E+ E +
Sbjct: 287 PDVVIYSTLVNGFSEHGRVDDALKLLSTMLCRPNTVCYNAALKGLCIAGRWDEVGELIAE 346
Query: 632 RISRD------KLEKLLNALC 646
+ +D L+N+LC
Sbjct: 347 MVRKDCPPNDATFSTLINSLC 367
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 128/305 (41%), Gaps = 33/305 (10%)
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKD-KRDLKSRFVYTKLLAILGKAGRPHEAL 248
EG L L+K K S + VLD Y +K R+ S + L +L ++ R A
Sbjct: 118 EGIFLNLMKHFS-KSSMHE--RVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLAR 174
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP 308
++ NL P+ ++ + + G L+ ++++ M+ S R+
Sbjct: 175 KLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMK---SARVS--------- 222
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL-RKSGLKPSAATYGLAMESYRRCLLKVL 367
P+LV Y+ ++ + + K F+++ K + P A TY +L
Sbjct: 223 --YPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYN------------IL 268
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
+ F + GK++ A + M+ G Y L C GR Q+A V +IKSL
Sbjct: 269 INGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSL-G 327
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 486
KP I++T LI G +D+ + Q MKD C + T N ML R F +A
Sbjct: 328 MKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEAL 387
Query: 487 ELFEE 491
++ ++
Sbjct: 388 DMVQK 392
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 92/436 (21%), Positives = 163/436 (37%), Gaps = 68/436 (15%)
Query: 244 PHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK------- 296
P AL IFN++ E + A Y S+ L + + + ++ +M K
Sbjct: 63 PQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGIFL 122
Query: 297 ------RIKNMHRKNWDPVL--------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLR- 341
+MH + D +P L + LN V S + + R
Sbjct: 123 NLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNARS 182
Query: 342 KSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
K L+P+ C+ +LV+ G + A V+ M+ V V Y
Sbjct: 183 KLNLRPNT------------CIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYS 230
Query: 402 -LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 460
L LC NG+ ++A+ E++ S + P +T+ LI G +D +I + MK
Sbjct: 231 TLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKS 290
Query: 461 H-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
+ C PN+ + ++ Y + +AKE+F E +KPD +Y++
Sbjct: 291 NGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEI-------------KSLGMKPDTISYTT 337
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE-A 578
++ + + + + M C+ D +L R G+ FD L+
Sbjct: 338 LINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGR-------FDEALDMV 390
Query: 579 GEIPHPLFFTE-----MLIQAIVQSN-YEKAVALINAM---AYAPFHITERQWTELFESN 629
++P F+ +++ + Q KA L+ M + P H T T L
Sbjct: 391 QKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSN--TLLLLLC 448
Query: 630 EDRISRDKLEKLLNAL 645
+ + +D +E LL L
Sbjct: 449 NNGMVKDAVESLLGLL 464
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 78/193 (40%), Gaps = 27/193 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ L+ L + G+ EA+ F M+ N+ PD Y+ + Q G + ++E
Sbjct: 228 TYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEF 287
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ P++ Y+ ++N + + VF +++ G+KP
Sbjct: 288 MKSNGC---------------SPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDT 332
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+Y L+ G+++EA ++ M+ + + + LC
Sbjct: 333 ISY------------TTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCRE 380
Query: 410 GRWQDAMLVVEKI 422
GR+ +A+ +V+K+
Sbjct: 381 GRFDEALDMVQKL 393
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +G +A ++L++ +K + F Y+ L+ K GR EA +FN +
Sbjct: 268 LINGFCQRGKVDRARTILEF---MKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFN-EI 323
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + PD +Y ++ L + G + E +L+++M+ K + D V
Sbjct: 324 KSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCR---------------ADTV 368
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+N +L ++ + ++L G + +Y ++++ ++G
Sbjct: 369 TFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSY------------RIVLNFLTQKG 416
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
++ +A + M RG V + L LCNNG +DA+
Sbjct: 417 ELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAV 457
>gi|168005568|ref|XP_001755482.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693189|gb|EDQ79542.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 129/287 (44%), Gaps = 34/287 (11%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
WR A +V ++ +K+ L S YT ++LGK+G+ +A+R+FN + D + ++
Sbjct: 204 WRDACAVFEY---MKENNKL-SPPTYTSYFSVLGKSGQSRKAIRVFNELPLDSEVRKNVF 259
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
+S+ T+ G + + +L E+++++ L+PD V Y+ V+ C
Sbjct: 260 VCNSILSTMIYNGKIDKAFRLFEQLKKEG---------------LQPDTVTYSTVIAGCA 304
Query: 326 PSHQ-WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAV 384
+ + + + ++ SGL A YG M C + L R EA A
Sbjct: 305 KTRDGYSKALALIEDIKASGLTQDAVIYGAMMNV---CASQGLDR---------EAQATF 352
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
+ M G Y L + G++Q A V+E I++ + P + + L+ + +
Sbjct: 353 QEMCDAGFTPNLFHYSSLLNAYASRGKYQQAERVLEAIRAAGLT-PNLVVYNSLMNAYAN 411
Query: 445 GGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+F ++ + + ++ + +M+ Y+++DM +A+E F+
Sbjct: 412 CQMPSKAREVFDRIEAEGLQRDMVSFCSMMDAYAKSDMLKEAQETFD 458
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/490 (20%), Positives = 189/490 (38%), Gaps = 67/490 (13%)
Query: 161 LVDRLSER-EMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
L+D ++ +M N F+ + G + T ++ G KG ++ +D +
Sbjct: 245 LIDGYCKKGDMEMANGLFIE-LKLKGFLPTVETYGAIINGFCKKGDFK----AIDRLLME 299
Query: 220 KDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ R L VY ++ K G +A+ M+E C PDI Y+++ + G
Sbjct: 300 MNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIE-CGCKPDIVTYNTLISGSCRDG 358
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVF 337
+ E +L+E+ K L P+ Y +++A C + W+
Sbjct: 359 KVSEADQLLEQALGKG---------------LMPNKFSYTPLIHAYCKQGGYDRASNWLI 403
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
++ + G KP TYG LV G+++ A+ M +RGV A
Sbjct: 404 -EMTERGHKPDLVTYG------------ALVHGLVVAGEVDVALTIREKMLERGVFPDAG 450
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ- 456
+Y L LC + A L++ ++ + P + L+ + G++D+ +F+
Sbjct: 451 IYNILMSGLCKKFKLPAAKLLLAEMLD-QSVLPDAFVYATLVDGFIRNGNLDEARKLFEL 509
Query: 457 HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
++ P I NAM+K Y + M A + + L PDE+T
Sbjct: 510 TIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRH-------------LAPDEFT 556
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
YS++++ H + + +++ M C+ + + L+ R G H F +
Sbjct: 557 YSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQ 616
Query: 577 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY---------APFHITERQWTELFE 627
G +P+ + ++ I+ ++ K LI+A ++ P +T F
Sbjct: 617 ACGLVPNVVTYS------ILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFS 670
Query: 628 SNEDRISRDK 637
N R +K
Sbjct: 671 KNGTRAISEK 680
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 89/499 (17%), Positives = 190/499 (38%), Gaps = 77/499 (15%)
Query: 144 EWHPEKRWR-SEAEAI-----RVLVDRLSEREMTAKNWKFVRIMNQSGLM--FTEGQMLK 195
+W + R SE+E + +++DR+ + E+ K + +V SG + F +LK
Sbjct: 43 QWEENLQTRFSESEVLASDVAHLVLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLK 102
Query: 196 LLKGLGDKGSWRQAMSVLDWVY-GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
LL + + S ++ V ++ + +R + ++ +G +AL ++ +
Sbjct: 103 LL-------ARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFV 155
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ------------KPSKRIKNMH 302
L+ +PD+ A +S+ L ++G ++ KL + M + +K +
Sbjct: 156 LKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLC 215
Query: 303 RKN------------WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ W P+++ YN +++ + +F +L+ G P+
Sbjct: 216 KEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVE 275
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TYG ++ F ++G + M RG+ VY + +
Sbjct: 276 TYG------------AIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTII-----DA 318
Query: 411 RWQDAMLV--VEKIKSLRH--SKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPN 465
R++ +V VE I+ + KP +T+ LI S G + + + Q + PN
Sbjct: 319 RYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPN 378
Query: 466 IGTVNAMLKVYSRNDMFSKAKE-LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
+ ++ Y + + +A L E T R + KPD TY +++
Sbjct: 379 KFSYTPLIHAYCKQGGYDRASNWLIEMTERGH--------------KPDLVTYGALVHGL 424
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
A + + + + M G D + L+ + K + +L+ +P
Sbjct: 425 VVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDA 484
Query: 585 LFFTEMLIQAIVQSNYEKA 603
+ ++ I N ++A
Sbjct: 485 FVYATLVDGFIRNGNLDEA 503
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/456 (20%), Positives = 183/456 (40%), Gaps = 73/456 (16%)
Query: 226 KSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
K +F+ + + ++ + P AL IFN++ E + A Y ++ L Q +
Sbjct: 53 KCKFISHESAINLIKREKDPQHALEIFNMVGEQKGFNHNHATYSTLIHKLAQTKKFHAVD 112
Query: 285 KLIERMRQKPSKRIKN-------------MHRKNWD------PVL--EPDLVVYNAVLNA 323
L+ +M + K +N +H + + P++ +P L + LN
Sbjct: 113 ALLHQMTYETCKFHENIFLNLMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAISTCLNI 172
Query: 324 CVPSHQW----KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
V S Q K + +V + L+ ++P+ C+ +LV+ + G +
Sbjct: 173 LVESKQIDLAQKCLLYVNEHLK---VRPNT------------CIFNILVKHHCKSGDLES 217
Query: 380 AVAAVRNMEQ-RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
A+ + M++ R Y L LC NGR ++A+ + E++ S P +T++ L
Sbjct: 218 ALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVL 277
Query: 439 IISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET----T 493
I GG D I + M+ + C+PN+ + ++ + + +AKE+F+E
Sbjct: 278 IKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGL 337
Query: 494 RANSSGYTFL----SGDG--------------APLKPDEYTYSSMLEASATAHQWEYFEY 535
+ ++ GYT L G G K D T++ +L+ +++
Sbjct: 338 KPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALR 397
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGK----CHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + +A G L++ + +L + G+ C LL +L G +PH E+L
Sbjct: 398 MLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALL----GLMLSRGFVPHYATSNELL 453
Query: 592 IQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 627
+ + AV + + F + W L E
Sbjct: 454 VCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIE 489
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 90/227 (39%), Gaps = 29/227 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K G A+ V+ + K +R + Y+ L+ L GR EA+ +F M+
Sbjct: 205 LVKHHCKSGDLESALEVMHEMK--KSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMV 262
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD Y + G K++E MR +P++
Sbjct: 263 SKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGC---------------DPNVF 307
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y+ ++N + + VF +++ SGLKP Y L+ F G
Sbjct: 308 NYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGY------------TTLINCFCGVG 355
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
+I+EA+ ++ M + A + L LC GR+ +A+ ++E +
Sbjct: 356 RIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENL 402
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 131/298 (43%), Gaps = 47/298 (15%)
Query: 304 KNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K WD ++ +PD++ +N +++A Q+K ++ QL +S P+ T
Sbjct: 133 KKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDT 192
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV----VGTASVYYELACCLC 407
Y L L++A+ G I A + M+ V +G + +
Sbjct: 193 YAL------------LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMK 240
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS--IFQHMKDH-CEP 464
G ++A+ V +++K R KP T+ +I ++ G +S ++ M+ H C+P
Sbjct: 241 RKGNTEEAIDVFQRMKRDR-CKPTTETYNLMI--NLYGKASKSYMSWKLYCEMRSHQCKP 297
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
NI T A++ ++R + KA+E+FE+ L DG L+PD Y Y++++E+
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQ-----------LQEDG--LEPDVYVYNALMESY 344
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ A ++ M GC+ D+ + ++ RAG E F+ + G P
Sbjct: 345 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP 402
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 145/362 (40%), Gaps = 52/362 (14%)
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLY 261
KG+ +A+ V +K R + Y ++ + GKA + + + +++ M C
Sbjct: 242 KGNTEEAIDVFQR---MKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCK-- 296
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P+I Y ++ + GL ++ ++ E++++ LEPD+ VYNA++
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDG---------------LEPDVYVYNALM 341
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
+ + G +F ++ G +P A+Y + +++Y R L A +EE
Sbjct: 342 ESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEE------- 394
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
M++ G+ T + L L + +D +K + + TF +
Sbjct: 395 -----MKRLGIAPTMKSHMLL---LSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 446
Query: 442 SMDG--GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
++ G G I M++ C +I T N ++ +Y + + +ELF E N
Sbjct: 447 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKN-- 504
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
+PD T++S + A + + V++ M SGC D LL
Sbjct: 505 -----------FRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 553
Query: 559 AS 560
S
Sbjct: 554 CS 555
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 105/280 (37%), Gaps = 44/280 (15%)
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
VF+++++ KP+ TY L + Y + + + E + ++ +
Sbjct: 251 VFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNI----------- 299
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH---IDDCI 452
Y L G + A + E+++ +P + L+ S G+ +
Sbjct: 300 -CTYTALVNAFAREGLCEKAEEIFEQLQE-DGLEPDVYVYNALMESYSRAGYPYGAAEIF 357
Query: 453 SIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS-----------SGYT 501
S+ QHM CEP+ + N M+ Y R + S A+ +FEE R S Y+
Sbjct: 358 SLMQHM--GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 415
Query: 502 F-------------LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+S +G ++PD + +SML Q+ E + M C D
Sbjct: 416 KARDVTKCEAIVKEMSENG--VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 473
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ + L+ +AG +E F L E P + +T
Sbjct: 474 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 513
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 149/368 (40%), Gaps = 46/368 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ L + +A SV G+ + + F Y+ L+A L + + EA + N M+
Sbjct: 58 LLRSLCQAQRFEEARSVFR---GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI 114
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D P++ Y S+ L ++G LKE V L RM + PD V
Sbjct: 115 -DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCP---------------PDGV 158
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
VYN +++ + +F+++ + G P+ TY L+ F +G
Sbjct: 159 VYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY------------NSLLSGFSRKG 206
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ + ++M ++G V + L C G +A + +++SL P +++
Sbjct: 207 EFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL-GCPPDVVSY 265
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
LI G + + + M + P+I + N ++ YS++ A +LF E +
Sbjct: 266 NTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPK 325
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
+ L+PD ++YS++++ A + V+K M +G D
Sbjct: 326 SG-------------LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372
Query: 555 LLVEASRA 562
L++ R
Sbjct: 373 LVIGLCRG 380
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 126/322 (39%), Gaps = 33/322 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D S++ + ++ M + G + T LL G KG + + S+ +
Sbjct: 162 VLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFK---DM 218
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ + + F + LL K G EA R+F L + PD+ +Y+++ + G
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLF-LEMRSLGCPPDVVSYNTLIRGMCSKGK 277
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
E +L+ M + + PD+V YN +++ S +F +
Sbjct: 278 PHEAQRLLREMIRSG---------------VGPDIVSYNILIDGYSKSGALDHAIKLFYE 322
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ KSGL+P A +Y ++ L RA GK+ A ++M G A+V
Sbjct: 323 IPKSGLEPDAFSYST--------IIDCLCRA----GKVGAAFVVFKDMIANGSAPDAAVV 370
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
L LC R ++ + + + PL + L+ DD IF +
Sbjct: 371 IPLVIGLCRGERLTESCELFQAMVKF-ECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELT 429
Query: 460 DHC-EPNIGTVNAMLKVYSRND 480
+ P++ +L+ R+D
Sbjct: 430 ERGFSPDVEISKVILETLRRSD 451
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/300 (19%), Positives = 117/300 (39%), Gaps = 33/300 (11%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P+ Y +L + + +++ VF+ + G P+ +Y +L+
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSY------------SILIAGL 97
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
K++EA + M G Y L LC G+ ++A+ + ++ R P
Sbjct: 98 CRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM-VYRGCPPD 156
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ + LI G + + +F+ M + C P + T N++L +SR F + + LF+
Sbjct: 157 GVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFK 216
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ R P+ +T++++L+ ++ M GC D
Sbjct: 217 DMLRQGCV-------------PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVV 263
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ L+ GK H + ++ +G P +++ I+ Y K+ AL +A+
Sbjct: 264 SYNTLIRGMCSKGKPHEAQRLLREMIRSGVGP------DIVSYNILIDGYSKSGALDHAI 317
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 55/126 (43%)
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
E+ ++ R + T+ A P+ YTY +L + A ++E V++GMA GC
Sbjct: 25 EVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCS 84
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
+ ++ L+ R K + +++ G P+ + + +L ++AV L
Sbjct: 85 PNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDL 144
Query: 607 INAMAY 612
+ M Y
Sbjct: 145 FSRMVY 150
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 158/379 (41%), Gaps = 58/379 (15%)
Query: 187 MFTEGQMLKLL-KGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH 245
MF +G +L GL G R +S+ + LK K + + + LL L K G+
Sbjct: 117 MFPDGFTYSILFDGLTRTGESRTMLSL--FAESLK-KGVMLGAYTCSILLNGLCKDGKVA 173
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
+A ++ ML L P Y+++ QV L+ + E+M+ S+ I+
Sbjct: 174 KAEQVLE-MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMK---SRHIR------ 223
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY------ 359
PD + YNA++N + ++ KSG+ PS T+ +++Y
Sbjct: 224 ------PDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 277
Query: 360 RRCLLKV-----------------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
+C + +V+AF + GKI EAVA + +M + V A VY +
Sbjct: 278 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 337
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH- 461
+G + A L+VEK+K+ S + +T+ L+ ID+ + +++
Sbjct: 338 IDAYIESGDTEQAFLLVEKMKNSGVSASI-VTYNLLLKGLCRSSQIDEAEELIYTLRNQG 396
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
P++ + N ++ KA EL +E + ++P TY +++
Sbjct: 397 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG-------------IRPTLRTYHTLV 443
Query: 522 EASATAHQWEYFEYVYKGM 540
A A+A + E +Y+ M
Sbjct: 444 SALASAGRVHDMECLYQQM 462
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/405 (19%), Positives = 152/405 (37%), Gaps = 87/405 (21%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++A L ++G+ +AL++F+ M+ D + P+ Y+++ + G L+ +L +
Sbjct: 17 FSYNVVIAGLWRSGKGSDALKVFDEMV-DMGVVPNWITYNTMIDGHVKGGDLEAGFRLRD 75
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M K P++V YN +L+ + + + ++ + P
Sbjct: 76 QMLHDGPK---------------PNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 120
Query: 349 AATY-----GLAMESYRRCLL------------------KVLVRAFWEEGKINEAVAAVR 385
TY GL R +L +L+ ++GK+ +A +
Sbjct: 121 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 180
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
+ G+V T +Y L C + A + E++KS RH +P IT+ LI
Sbjct: 181 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS-RHIRPDHITYNALI------ 233
Query: 446 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
N + K+ +M +KA++L E ++
Sbjct: 234 ------------------------NGLCKL----EMVTKAEDLVMEMEKSG--------- 256
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
+ P T++++++A TA Q E V M G + D ++ + GK
Sbjct: 257 ----VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 312
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
D ++ P+ + ++ I + E+A L+ M
Sbjct: 313 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 357
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 121/302 (40%), Gaps = 27/302 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
EPD+ + +++N ++ + + Q+ + G+KP Y ++
Sbjct: 137 FEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIY------------TTIID 184
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+ + G ++ A++ ME G+ +Y L LCN+GRW+DA L++ + R K
Sbjct: 185 SLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMK-RKIK 243
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P ITF LI + + G + D ++ M + PNI T +++ +A+++
Sbjct: 244 PDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQM 303
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F + G PD Y+S++ + E ++ M+ G +
Sbjct: 304 F-----------YLMETKGC--FPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGN 350
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+ L+ GK ++ + F ++ G P+ + +L KA+ +
Sbjct: 351 TITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFE 410
Query: 609 AM 610
M
Sbjct: 411 DM 412
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 151/387 (39%), Gaps = 51/387 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F +T L+ R EA+ + N M+E + PD+ Y ++ +L + G + + L
Sbjct: 142 FTFTSLINGFCLGNRIEEAMSMVNQMVE-MGIKPDVVIYTTIIDSLCKNGHVDNALSLFN 200
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M +N+ + PD+V+Y +++N S +W+ + + + K +KP
Sbjct: 201 QM-------------ENYG--IRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPD 245
Query: 349 AATYGLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVR 385
T+ ++++ + L+ EG+++EA
Sbjct: 246 VITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFY 305
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
ME +G Y L C + +DAM + ++ S + IT+T LI
Sbjct: 306 LMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEM-SQKGLTGNTITYTTLIQGFGLV 364
Query: 446 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G + +F HM PNI T N +L N +KA +FE+ +
Sbjct: 365 GKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREI------- 417
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
DG P P+ TY+ +L + E V+ M + + ++ +AGK
Sbjct: 418 -DGVP--PNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGK 474
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ F SL G P+ + +T M+
Sbjct: 475 VKDALNLFCSLPSKGVKPNVVTYTTMI 501
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 110/267 (41%), Gaps = 33/267 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F YT L+ L GR EA ++F LM E +PD+ AY S+ + +++ +K+
Sbjct: 282 FTYTSLINGLCMEGRLDEARQMFYLM-ETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFY 340
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M QK L + + Y ++ + VF + G+ P+
Sbjct: 341 EMSQKG---------------LTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPN 385
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR---GVVGTASVYYELACC 405
TY VL+ GK+N+A+ +M++R GV Y L
Sbjct: 386 IRTY------------NVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHG 433
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 464
LC NG+ + A++V ++ R IT+T +I G + D +++F + +P
Sbjct: 434 LCYNGKLEKALMVFGDMQK-RDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKP 492
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEE 491
N+ T M+ R + +A LF +
Sbjct: 493 NVVTYTTMISGLFREGLMLEAHVLFRK 519
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 168/436 (38%), Gaps = 73/436 (16%)
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWV-------YGLKDKRDLKSRFVYTKLLAILGKA 241
++G +L L L W + VL W+ +G+ D + ++A GK
Sbjct: 70 SKGDVLGTLIRLRQLNKWTMVLEVLLWLKQQDWWNFGIHD---------FNLMIAAYGKL 120
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
G+P A F M E L P++A + S+ L R R +++
Sbjct: 121 GQPGIAELSFTEMRE-VGLEPNVACFTSL---------------LEAHARTGNFVRAESI 164
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG-LKPSAATYGLAMESYR 360
+++ P V Y +NA + ++ +FK L +S KP A Y L + +Y
Sbjct: 165 YQEMLKTGPAPTEVTYQVYINALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYG 224
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
+ GK +E A R M+ GV T + L +Q V +
Sbjct: 225 KA------------GKFSEQQALFRQMKGAGVPMTVVTFNSLMA-------FQKT--VAD 263
Query: 421 KIKSLRHS-----KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 474
LRH KP IT+TGLI + +++ +F+ M P+ N +L
Sbjct: 264 AEACLRHMQAAKIKPDVITYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLD 323
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
Y++ A+ LF+ + +PD +Y+++L A A + E
Sbjct: 324 AYAKCKEVEGAESLFKSMGQDRC-------------RPDIRSYTTLLAAYANTGNMKKAE 370
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 594
+ K M +G + + + L+ + + + F+ L +AG P+ FT ++
Sbjct: 371 RLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPNSTIFTLLVRTF 430
Query: 595 IVQSNYEKAVALINAM 610
Q ++E A++ M
Sbjct: 431 GQQEDFESALSWFKKM 446
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 130/351 (37%), Gaps = 85/351 (24%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ Y + L KA R ++A RIF + E PD Y+ + T G+ G E L
Sbjct: 176 TEVTYQVYINALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQAL 235
Query: 287 IERMR-----------------QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
+M+ QK + R ++PD++ Y ++NA + +
Sbjct: 236 FRQMKGAGVPMTVVTFNSLMAFQKTVADAEACLRHMQAAKIKPDVITYTGLINAYSKARR 295
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+ VF+++ SGL+PS Y +++Y +C
Sbjct: 296 VEEAHVVFREMVASGLRPSRIAYNTLLDAYAKC--------------------------- 328
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
+ V G S++ + C +P ++T L+ + + G++
Sbjct: 329 KEVEGAESLFKSMGQDRC---------------------RPDIRSYTTLLAAYANTGNMK 367
Query: 450 DCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
+ + MK EPN+ T +++ Y+ + + FE+ +A
Sbjct: 368 KAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAG------------ 415
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYV---YKGMALSGCQLDQTKHAWLL 556
+KP+ ++ ++ T Q E FE +K M SGC DQ A L+
Sbjct: 416 -IKPNSTIFTLLVR---TFGQQEDFESALSWFKKMLDSGCPADQRSRAALM 462
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 110/277 (39%), Gaps = 27/277 (9%)
Query: 337 FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
F ++R+ GL+P+ A + +E++ R G A + + M + G T
Sbjct: 130 FTEMREVGLEPNVACFTSLLEAHART------------GNFVRAESIYQEMLKTGPAPTE 177
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
Y LC R+ DA + + + +KP + ++ + G + ++F+
Sbjct: 178 VTYQVYINALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFR 237
Query: 457 HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
MK P + V + N + + F++T + + A +KPD T
Sbjct: 238 QMKGAGVP--------MTVVTFNSLMA-----FQKTVADAEACLRHM--QAAKIKPDVIT 282
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
Y+ ++ A + A + E V++ M SG + + + LL ++ + E F S+
Sbjct: 283 YTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMG 342
Query: 577 EAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA 613
+ P +T +L N +KA L+ M A
Sbjct: 343 QDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQA 379
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/443 (20%), Positives = 181/443 (40%), Gaps = 88/443 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRI----- 250
L+KGL +G ++A+ D V L+ + D R Y L+ L K G A+++
Sbjct: 145 LIKGLCLRGEVKKALKFHDDVVALEFQLD---RISYGTLINGLCKIGETKAAIQLMRNLE 201
Query: 251 ----------FNLML----------EDCNLY---------PDIAAYHSVAVTLGQVGLLK 281
+N+++ E CNLY P++ Y ++ +G L
Sbjct: 202 ERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLI 261
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
E V L+ M+ +KN++ PD+ ++ +++A + K V +
Sbjct: 262 EAVALLNEMK------LKNIN---------PDVYTFSILIDALGKEGKMKAAKIVLAVMM 306
Query: 342 KSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
K+ +KP TY LV ++ ++ A +M Q GV Y
Sbjct: 307 KAYVKPDVVTYN------------SLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTI 354
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 461
+ LC +A+ + E++K ++ P ITF LI G I + M+D
Sbjct: 355 MIDGLCKTKMVDEAISLFEEMKH-KNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDR 413
Query: 462 CE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 520
+ ++ T ++++ +N +A LF++ ++PD YTY+ +
Sbjct: 414 SQLADVITYSSLIDALCKNCHLDQAIALFKKMITQE-------------IQPDMYTYTIL 460
Query: 521 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL---- 576
++ + + + V++ + + G LD + ++ +AG L + A +LL
Sbjct: 461 IDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAG---LFDEAL-ALLSKME 516
Query: 577 EAGEIPHPLFFTEMLIQAIVQSN 599
+ G IP+ + F +++I A+ + +
Sbjct: 517 DNGCIPNAITF-DIIICALFEKD 538
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 102/259 (39%), Gaps = 38/259 (14%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-----GLAMESYRRCLL 364
+ DLV N ++N Q F V + K G P T GL + + L
Sbjct: 100 ITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKAL 159
Query: 365 K------------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
K L+ + G+ A+ +RN+E+R + +Y + L
Sbjct: 160 KFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSL 219
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 465
C N +A + ++ + + P +T+T LI G + + +++ MK + P+
Sbjct: 220 CKNKLVGEACNLYSEMNA-KQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPD 278
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T + ++ + AK + +A +KPD TY+S+++
Sbjct: 279 VYTFSILIDALGKEGKMKAAKIVLAVMMKAY-------------VKPDVVTYNSLVDGYF 325
Query: 526 TAHQWEYFEYVYKGMALSG 544
++ ++ +YV+ MA SG
Sbjct: 326 LVNEVKHAKYVFNSMAQSG 344
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/404 (20%), Positives = 148/404 (36%), Gaps = 52/404 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ + + GR EA + L++E PD+ +Y +V + G L ++ KLIE M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLL-LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++K L+P+ +Y +++ + F ++ + G+ P
Sbjct: 308 KRKG---------------LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
Y L+ F + G I A M R + Y + C G
Sbjct: 353 VY------------TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
+A + ++ + +P +TFT LI GH+ D + HM + C PN+ T
Sbjct: 401 DMVEAGKLFHEM-FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTF--------------------LSG--DG 507
++ + A EL E + F L G +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
A L D TY+++++A + + + + + K M G Q L+ G
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 568 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
E + +L G P+ F ++ Q +++N + A A+ M
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 114/289 (39%), Gaps = 43/289 (14%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+T+L+ KAG +A R+ N M++ C+ P++ Y ++ L + G L +L+
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCS--PNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M W L+P++ YN+++N S + + + +GL
Sbjct: 482 M---------------WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 350 ATYGLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRN 386
TY M++Y + VL+ F G + + +
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
M +G+ A+ + L C + A + + + S R P T+ L+
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS-RGVGPDGKTYENLVKGHCKAR 645
Query: 447 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
++ + +FQ MK ++ T + ++K + + F +A+E+F++ R
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 92/475 (19%), Positives = 166/475 (34%), Gaps = 112/475 (23%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLML--------EDCNLYP------------------- 262
V+ +L G EA R+F ML + CN+Y
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 263 --------DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
++A+Y+ V + Q+G +KE L+ M K PD+
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG---------------YTPDV 281
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+ Y+ V+N + V+ + + +++ GLKP++ YG ++ +L R
Sbjct: 282 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG--------SIIGLLCRI---- 329
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
K+ EA A M ++G++ VY L C G + A ++ S R P +T
Sbjct: 330 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS-RDITPDVLT 388
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
+T +I S F + D E A +LF E
Sbjct: 389 YTAII-------------SGFCQIGDMVE---------------------AGKLFHEM-- 412
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
F G L+PD T++ ++ A + V+ M +GC + +
Sbjct: 413 -------FCKG----LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAP 614
L+ + G + + G P+ + ++ N E+AV L+ A
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 615 FHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA--LHAL 667
+ +T L ++ DK +++L + + +T + L LH +
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 165/424 (38%), Gaps = 88/424 (20%)
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
D + +K + L +R Y L+ K G EA + LM ++ NL PD+ Y+ +
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQN-NLLPDVWTYNMLING 322
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
L G ++E KL + M +N+ L PD+V YN ++N C+ +
Sbjct: 323 LCNEGRIEEAFKLRDEM--------ENLK-------LLPDVVSYNTLINGCLEWSKISEA 367
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
F + +++ + G+KP+A T+ ++V+ + +EGK+++A + ME+ G
Sbjct: 368 FKLLEEMSEKGVKPNAVTHN------------IMVKWYCKEGKMDDASNTITKMEESGFS 415
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEK----------------IKSLRHSKPL------ 431
Y L C G +A +++ +++L K L
Sbjct: 416 PDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKL 475
Query: 432 ------------EITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAML----K 474
E+++ LI+ G++D + ++ MK+ P+ T N ++ +
Sbjct: 476 LSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQ 535
Query: 475 VYSRNDMFSKAKELFEETTRANSSGY-TFLSG---DG--------------APLKPDEYT 516
SK EL E + + Y T L G +G KPD +T
Sbjct: 536 CGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFT 595
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
+ +L E ++ G +D + L+ + G+ L+ AF+ L
Sbjct: 596 CNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGR---LDDAFNLLS 652
Query: 577 EAGE 580
E E
Sbjct: 653 EMEE 656
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 103/494 (20%), Positives = 180/494 (36%), Gaps = 95/494 (19%)
Query: 240 KAGRPHEALRIFNLM--------LEDCN-LYPDIAAY---HSV---------AVTLGQVG 278
++G+PH A +IF M L CN L + Y HSV A+ LG V
Sbjct: 147 QSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVP 206
Query: 279 LLKELVKLI-----ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
+ +I E + + + M + N PD V YN +L+ +
Sbjct: 207 NVNTFNIVIYGYCLENKFKDAVEFLNVMGKYN----CSPDNVTYNTILDTLCKKGRLGDA 262
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
+ ++ GL P+ TY +LV + + G + EA + M Q ++
Sbjct: 263 RDLLMDMKSRGLLPNRNTYN------------ILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
Y L LCN GR ++A + +++++L+ P +++ LI ++ I +
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLL-PDVVSYNTLINGCLEWSKISEAFK 369
Query: 454 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
+ + M + +PN T N M+K Y + A T+ SG++ P
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTI---TKMEESGFS----------P 416
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
D TY++++ A M ++D +L R K LE A+
Sbjct: 417 DCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKK---LEEAY 473
Query: 573 DSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESN 629
L A G + + +++ N ++A+ L W E+ E
Sbjct: 474 KLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKL---------------WDEMKEK- 517
Query: 630 EDRISRDKLEKLLNALCNCNAASSEITVSN-------------LSRALHALCRSEKERDL 676
E S ++ LC C I+ N + LH CR E D+
Sbjct: 518 EIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCR---EGDV 574
Query: 677 SSSAHFGSQAIDIS 690
+ F ++ ++ S
Sbjct: 575 EKAFQFHNKMVENS 588
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 143/387 (36%), Gaps = 43/387 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y +L L K GR +A R + ++ L P+ Y+ + ++G LKE +IE
Sbjct: 245 TYNTILDTLCKKGRLGDA-RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIEL 303
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M Q L PD+ YN ++N + + F + ++ L P
Sbjct: 304 MTQNN---------------LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDV 348
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+Y L+ E KI+EA + M ++GV A + + C
Sbjct: 349 VSYN------------TLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKE 396
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
G+ DA + K++ S P +T+ LI G++ + M + + + + T
Sbjct: 397 GKMDDASNTITKMEESGFS-PDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVT 455
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
+N +L+ R K +E ++ + A GY DE +Y +++
Sbjct: 456 LNTILRTLCRE---KKLEEAYKLLSSARKRGYFI----------DEVSYGTLIVGYFKDG 502
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ ++ M + ++ + GK + LLE+G +P +
Sbjct: 503 NVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYN 562
Query: 589 EMLIQAIVQSNYEKAVALINAMAYAPF 615
+L + + EKA N M F
Sbjct: 563 TILHGYCREGDVEKAFQFHNKMVENSF 589
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 80/412 (19%), Positives = 156/412 (37%), Gaps = 77/412 (18%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M GL+ L+ G G ++A +V++ + L + Y L+ L
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIEL---MTQNNLLPDVWTYNMLINGLCN 325
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKR 297
GR EA ++ + M E+ L PD+ +Y+++ + + E KL+E M +K P+
Sbjct: 326 EGRIEEAFKLRDEM-ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAV 384
Query: 298 IKNMHRKNW------------------DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
N+ K W + PD V YN ++N + F +
Sbjct: 385 THNIMVK-WYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443
Query: 340 LRKSGLKPSAAT-----------------YGLAMESYRRCLL------KVLVRAFWEEGK 376
+ + +K + T Y L + +R L+ ++++G
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN 503
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEIT 434
++ A+ M+++ ++ + Y + LC G+ + A + K+ L S P E T
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA---ISKLNELLESGLLPDETT 560
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEE-- 491
+ ++ G ++ M ++ +P++ T N +L+ + KA +LF
Sbjct: 561 YNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWV 620
Query: 492 ------TTRANSSGYTFLSGDG--------------APLKPDEYTYSSMLEA 523
T ++ T L +G L PD YTY++++ A
Sbjct: 621 SKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 163/377 (43%), Gaps = 48/377 (12%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK-SRFVYTKLLAILG 239
M + G+ E L+ + G W A VL + + D++ + FV+++LLA
Sbjct: 367 MEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEM----ETGDVQPNSFVFSRLLAGYR 422
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
G + ++ M + + PD Y+ V T G+ L + +RM +
Sbjct: 423 DRGEWQKTFQVLKEM-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG----- 476
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+EPD V +N +++ + +F+ + + G P A TY + + SY
Sbjct: 477 ----------IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY 526
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
+ W++ K + M+ +G++ + L +GR+ DA+ +
Sbjct: 527 GD-------QERWDDMK-----RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 574
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSR 478
E++KS+ KP + LI + G + ++ F+ M D +P++ +N+++ +
Sbjct: 575 EEMKSV-GLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE 633
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
+ ++A + + ++ +G +KPD TY+++++A +++ VY+
Sbjct: 634 DRRDAEAFAVLQ-----------YMKENG--VKPDVVTYTTLMKALIRVDKFQKVPGVYE 680
Query: 539 GMALSGCQLDQTKHAWL 555
M +SGC+ D+ + L
Sbjct: 681 EMIMSGCKPDRKARSML 697
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 150/395 (37%), Gaps = 48/395 (12%)
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+DK +L + V ++ K+G P AL++ M + L A S+ L G
Sbjct: 264 RDKLELDVQLVNDIIMG-FAKSGDPSRALQLLG-MAQATGLSAKTATLVSIISALANSGR 321
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
E L E +RQ K P YNA+L V + K + +
Sbjct: 322 TLEAEALFEELRQSGIK---------------PRTKAYNALLKGYVKTGPLKDAELMVSE 366
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ K G+ P TY L +++Y WE +I ++ ME V + V+
Sbjct: 367 MEKRGVSPDEHTYSLLIDAYVNA-------GRWESARI-----VLKEMETGDVQPNSFVF 414
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH-IDDCISIFQHM 458
L + G WQ V++++KS+ KP + F ++I + + +D ++ F M
Sbjct: 415 SRLLAGYRDRGEWQKTFQVLKEMKSI-GVKP-DRQFYNVVIDTFGKFNCLDHAMTTFDRM 472
Query: 459 -KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
+ EP+ T N ++ + ++ A+E+FE R P TY
Sbjct: 473 LSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC-------------LPCATTY 519
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+ M+ + +W+ + + M G + H L+ ++G+ + + +
Sbjct: 520 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 579
Query: 578 AGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAMA 611
G P + LI A Q E+AV M
Sbjct: 580 VGLKPSSTMYNA-LINAYAQRGLSEQAVNAFRVMT 613
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 165/393 (41%), Gaps = 52/393 (13%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
RQ + D V +K KR + + ++ +A + EA+ FN+M + ++ P++AA
Sbjct: 70 RQYQLMWDVVKVMKSKRMVNVE-TFCIIMRKYARAQKVEEAVYTFNIM-DKYDVPPNLAA 127
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQK--PSKRIKNMHRKNW--DPVL------------ 310
++ + L + +++ ++ + ++ + P + ++ + W DP L
Sbjct: 128 FNGLLSALCKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMVS 187
Query: 311 ---EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
PD+V Y +++ + + + ++ + KP+ Y VL
Sbjct: 188 NGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYS------------VL 235
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
V + E +I +AV+ ME G+ +VY L C R ++ V+ ++ +
Sbjct: 236 VHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEM-DCKG 294
Query: 428 SKPLEITFTGLIISSMDG-GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
P TF +I+SS+ G G D+ +F M CEP+ T M+K++ D KA
Sbjct: 295 VTPNSRTF-NIILSSLIGRGETDEAYRVFLRMIKVCEPDADTYTMMIKMFCERDELKKAL 353
Query: 487 EL--FEETTRANSSGYTF-LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
++ + + R S +TF + +G K D +LE E + KG+ S
Sbjct: 354 KVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLE-----------EMIEKGIRPS 402
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
G + + LL++ R L+ + L+
Sbjct: 403 GVTFGRLRQ--LLIKEGREDVLKFLQKKINVLV 433
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 123/290 (42%), Gaps = 58/290 (20%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-----YTKLLAILGKAGRPHEALRI 250
LL L + R+A + D +K RFV Y+ LL GK +A I
Sbjct: 131 LLSALCKSKNVRKAQEIFD---------SIKDRFVPDSKTYSILLEGWGKDPNLPKAREI 181
Query: 251 FNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNMHRKNW- 306
F M+ + PDI Y + L + G + E + ++ M KP+ I ++ +
Sbjct: 182 FREMVSN-GCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYG 240
Query: 307 ------DPV----------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
D V +EPD+ VYNA++ A +++ K V+ V ++ G+ P++
Sbjct: 241 IENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSR 300
Query: 351 TYGLAM----------ESYRRCL--LKV----------LVRAFWEEGKINEAVAAVRNME 388
T+ + + E+YR L +KV +++ F E ++ +A+ + M+
Sbjct: 301 TFNIILSSLIGRGETDEAYRVFLRMIKVCEPDADTYTMMIKMFCERDELKKALKVWKYMK 360
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
+ + + + L LC G A +++E++ + +P +TF L
Sbjct: 361 LKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIE-KGIRPSGVTFGRL 409
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 92/222 (41%), Gaps = 33/222 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F+Y+ L+ G R +A+ F L +E+ + PD+A Y+++ + LK + +++
Sbjct: 230 FIYSVLVHTYGIENRIEDAVSTF-LEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLN 288
Query: 289 RMRQK---PSKRIKNM------HRKNWD----------PVLEPDLVVYNAVLNACVPSHQ 329
M K P+ R N+ R D V EPD Y ++ +
Sbjct: 289 EMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRMIKVCEPDADTYTMMIKMFCERDE 348
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
K V+K ++ PS T+ +VL+ E+G + +A + M +
Sbjct: 349 LKKALKVWKYMKLKRFMPSMHTF------------QVLINGLCEKGDVTQACVLLEEMIE 396
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+G+ + + L L GR +D + ++K ++ + PL
Sbjct: 397 KGIRPSGVTFGRLRQLLIKEGR-EDVLKFLQKKINVLVNDPL 437
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 147/387 (37%), Gaps = 84/387 (21%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++D +R+M + + ++ G + L+ GL +G +A+ + +
Sbjct: 225 IIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD 284
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
K DL VY L+ L + G AL++ N M+ED +PDI Y+ V L ++G +
Sbjct: 285 LKPDL---VVYNSLVKGLCRQGLILHALQVMNEMVED-GCHPDIWTYNIVINGLCKMGNI 340
Query: 281 KE--------LVK-------LIERMRQKPSKRIK-----NMHRKNWDPVLEPDLVVYNAV 320
+ +VK M KR+K + + W + PD + YN+V
Sbjct: 341 SDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSV 400
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA 380
LN + + K V F+++ G +P+A TY +L+ F + ++ EA
Sbjct: 401 LNGLCKAGKAKEVNETFEEMILKGCRPNAITY------------NILIENFCKINQLEEA 448
Query: 381 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 440
+ M Q G+V + L C NG A L+ +K+ +S +
Sbjct: 449 SGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATAD-------- 500
Query: 441 SSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
T N ++ YS A+++F E S GY
Sbjct: 501 ---------------------------TFNILIGAYSSKLNMQMAEKIFGEMI---SKGY 530
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATA 527
KPD YTY +++ S A
Sbjct: 531 ----------KPDLYTYRVLVDGSCKA 547
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/405 (18%), Positives = 159/405 (39%), Gaps = 51/405 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y ++ L G ++A +F+ ML +++PD+A +++V L Q G + E L+
Sbjct: 81 LAYCTVVRGLYAHGHGYDARHLFDEMLRR-DVFPDVATFNNVLHALCQKGDIMESGALLA 139
Query: 289 RMRQKPSKRIKNMHRKNW--------------------DPVLEPDLVVYNAVLNACVPSH 328
++ ++ + W D + PD+V YN ++
Sbjct: 140 KVLKR-GMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDS 198
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ + +++ G P TY ++ Y + + EA +++
Sbjct: 199 KVQEAAQYLRRMMNQGCIPDDFTYNTIIDGY------------CKRDMLQEATELLKDAI 246
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
+G V Y L LC G + A+ + + ++ + KP + + L+ G I
Sbjct: 247 FKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQA-KDLKPDLVVYNSLVKGLCRQGLI 305
Query: 449 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
+ + M +D C P+I T N ++ + S A + + A GY
Sbjct: 306 LHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMND---AIVKGYL------ 356
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
PD +T+++M++ + + + + M + G D + +L +AGK
Sbjct: 357 ----PDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKE 412
Query: 568 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAMA 611
+ F+ ++ G P+ + + +LI+ + N E+A +I M+
Sbjct: 413 VNETFEEMILKGCRPNAITY-NILIENFCKINQLEEASGVIVRMS 456
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 98/235 (41%), Gaps = 37/235 (15%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY------------ 359
P YNA+++A V + V+ ++ +G+ P A T+ + ++S+
Sbjct: 8 PAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRL 67
Query: 360 ------RRCLLKVL-----VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
R C +K L VR + G +A M +R V + + + LC
Sbjct: 68 LRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQ 127
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 468
G ++ ++ K+ R + T I +GG +++ +++ + M + P++ T
Sbjct: 128 KGDIMESGALLAKVLK-RGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDVVT 186
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
N +++ ++ SK +E + R + G PD++TY+++++
Sbjct: 187 YNTLMRGLCKD---SKVQEAAQYLRRMMNQGCI----------PDDFTYNTIIDG 228
>gi|302768873|ref|XP_002967856.1| hypothetical protein SELMODRAFT_169254 [Selaginella moellendorffii]
gi|300164594|gb|EFJ31203.1| hypothetical protein SELMODRAFT_169254 [Selaginella moellendorffii]
Length = 731
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 126/316 (39%), Gaps = 30/316 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P L YN +L+ C + G F F L+++G KP Y + + + L LV
Sbjct: 62 PTLSTYNMLLSVCCNAGDMNGAFGAFAALKRAGFKPDCMIYTTLISTCSKALKTDLVFQA 121
Query: 372 WEEGKI----NEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
G I N +A V R ME GV Y + G A + +I +
Sbjct: 122 RNPGPILHWTNSVLAQVYREMESVGVEANLLTYGAIIDGCARTGELAKA-FGIYRIMLSK 180
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMK--DHCEPNIGTVNAMLKVYSRNDMFSK 484
KP + F LI + G + +F +K + PN T+ +++ S+
Sbjct: 181 KIKPDRVIFNSLINACGRSGAVKRAFEVFTELKSENPINPNHVTMCSLIDACSKAGDGDS 240
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A E+ YT + G P+ YT + + A +++ E +Y M G
Sbjct: 241 AYEV-----------YTMMRKRGIGGCPEPYT--AAVHACSSSGNLERAFSIYDDMKKDG 287
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE---IPHPLFFTEMLIQAIVQSNYE 601
+ D+ + L+ A A K ++ AFD L E + +P P+ F+ ++ N+E
Sbjct: 288 VKPDEIFFSALIDVAGHASK---IDCAFDVLQEVEKYSLVPGPVIFSSLMGVCSNTGNWE 344
Query: 602 KAVAL---INAMAYAP 614
KA+ L I A+ P
Sbjct: 345 KAIFLYENIQAVGIRP 360
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 130/304 (42%), Gaps = 31/304 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L P+ V Y A+++ Q + F +F+++R+ G++P+ TY CL+ R
Sbjct: 69 LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTY--------NCLIGEWCR 120
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
G+ A + M RG+V Y L LC +G+ DA +++ +++ ++
Sbjct: 121 T----GEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRT-EGTR 175
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSR-NDMFSKAKE 487
P ITF L+ G + + + F MK +P+ T N ++ + R DM +
Sbjct: 176 PSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRA 235
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA-HQWEYFEYVYKGMALSGCQ 546
L + R L+P + TY+ ++++ A H + FE + GM +G +
Sbjct: 236 LSDMKERG--------------LEPTKVTYTILIDSFARENHMGKAFE-ILAGMEKAGLE 280
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
+D + L+ G F S+ E G P + + M+ + + KA+ L
Sbjct: 281 VDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKL 340
Query: 607 INAM 610
I M
Sbjct: 341 IMEM 344
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 46/245 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G A +LD ++ + S + L+ GKAG+ AL FN M
Sbjct: 149 LIAGLCRHGKLWDAAKLLDM---MRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQM- 204
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR--QKPSKRIKNMHRKNWDPVLEPD 313
A + AVT L+ R R + ++ + +M + LEP
Sbjct: 205 -------KAAGFQPSAVTYNM------LIAGFCRARDMTRANRALSDMKERG----LEPT 247
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG-----LAMESYRR------- 361
V Y ++++ + F + + K+GL+ A TYG L ME +
Sbjct: 248 KVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQ 307
Query: 362 -----------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+ +++ + EG +A+ + M Q+G++ ++ Y LC +
Sbjct: 308 SMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDD 367
Query: 411 RWQDA 415
+ Q+A
Sbjct: 368 KCQEA 372
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 165/427 (38%), Gaps = 60/427 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
LLK L D+G QA +L + G D+ + YT ++ K G ++A +F
Sbjct: 192 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVA---YTTVIDCFFKEGDVNKACDLFKE 248
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M++ + PD+ Y SV L + R K ++ M K + PD
Sbjct: 249 MVQR-GIPPDLVTYSSVVHALCK-----------ARAMGKAEAFLRQMVNKG----VLPD 292
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
YN ++ + QWK VFK++R+ + P T L +L+ + +
Sbjct: 293 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVT------------LNMLMGSLCK 340
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVY------YELACCLCNNGRWQDAMLVVEKIKSLRH 427
GKI EA M +G Y Y CL + D ML
Sbjct: 341 YGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLG-------DG 393
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 486
P TF+ LI + + G +D + IF M+DH +P++ T ++ R A
Sbjct: 394 IAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAM 453
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
E F + + PD+Y Y +++ T + + + +G +
Sbjct: 454 EKFNQMIDQG-------------VAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMR 500
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
LD + ++ + G+ ++ FD + G+ P + ++ ++ + EKA+ +
Sbjct: 501 LDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRV 560
Query: 607 INAMAYA 613
+AM A
Sbjct: 561 FDAMVSA 567
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 144/332 (43%), Gaps = 58/332 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K + G +AM + + + K D+ + YT ++A L + G+ +A+ FN M+
Sbjct: 404 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVT---YTTVIAALCRIGKMDDAMEKFNQMI 460
Query: 256 EDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLI--ERMRQKP---SKRIKNMHRKN-- 305
D + PD AYH + T G + KEL+ I MR S I N+ +
Sbjct: 461 -DQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRI 519
Query: 306 ------WDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+D + PD VVY+ +++ + + VF + +G++P+ YG
Sbjct: 520 MDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYG-- 577
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
LV + + G+I+E ++ R M Q+G+ + +Y + +G +
Sbjct: 578 ----------TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIII-----DGLFVAG 622
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI----------DDCISIFQHMKD-HCEP 464
V K+K H E+T +G+ I+ + D+ I +F+ ++ + +
Sbjct: 623 RTVPAKVKF--H----EMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKI 676
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
+I T+N M+ + +AK+LF +R+
Sbjct: 677 DIITLNTMIAGMFQTRRVEEAKDLFASISRSG 708
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 84/420 (20%), Positives = 156/420 (37%), Gaps = 85/420 (20%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+V L + K F+R M G++ L+ G G W++A+ V ++
Sbjct: 264 VVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKE---MR 320
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGL 279
L L+ L K G+ EA +F+ M ++ N PD+ +Y + G
Sbjct: 321 RHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQN--PDVFSYKIMLNGYATKGC 378
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L ++ L + M + PD+ ++ ++ A +F +
Sbjct: 379 LVDMTDLFDLMLGDG---------------IAPDIYTFSVLIKAYANCGMLDKAMIIFNE 423
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+R G+KP TY ++ A GK+++A+ M +GV Y
Sbjct: 424 MRDHGVKPDVVTY------------TTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 471
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS-------MDGGHIDD-C 451
+ L C +G A ++ +I + + L+I F II++ MD +I D
Sbjct: 472 HCLIQGFCTHGSLLKAKELILEI--MNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLT 529
Query: 452 ISIFQH---------MKDHC--------------------EPNI---GT-VNAMLKVYSR 478
+++ QH M +C EPN+ GT VN K+
Sbjct: 530 VNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRI 589
Query: 479 NDMFSKAKELFEETTRANSSGYT------FLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
++ S +E+ ++ + ++ Y F++G P K + M E+ ++ Y
Sbjct: 590 DEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAK---VKFHEMTESGIAINKCTY 646
Score = 43.9 bits (102), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 74/386 (19%), Positives = 138/386 (35%), Gaps = 63/386 (16%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLV 368
VL P Y +++ C +H+ + F QL ++GL+ + L+
Sbjct: 110 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDII------------IANHLL 157
Query: 369 RAFWEEGKINEAV-AAVRNMEQRGVVGTASVYYELACCLCNNGR-WQDAMLVVEKIKSLR 426
+ F E + +EA+ + + G V Y L LC+ G+ Q L+ +
Sbjct: 158 KGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGA 217
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
P + +T +I G ++ +F+ M + P++ T ++++ + KA
Sbjct: 218 VCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKA 277
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+ + + PD +TY++++ ++ QW+ V+K M
Sbjct: 278 EAFLRQMVNKG-------------VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 324
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
D L+ + GK FD++ G+ P + ML + Y
Sbjct: 325 LPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIML------NGYATKGC 378
Query: 606 LINAMAYAPFHITERQWTELFESN-EDRISRD--KLEKLLNALCNCNAASSEITVSNLSR 662
L++ T+LF+ D I+ D L+ A NC + + N R
Sbjct: 379 LVD-------------MTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMR 425
Query: 663 -------------ALHALCRSEKERD 675
+ ALCR K D
Sbjct: 426 DHGVKPDVVTYTTVIAALCRIGKMDD 451
>gi|414888268|tpg|DAA64282.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 868
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 128/354 (36%), Gaps = 81/354 (22%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G+ GR ++F M + PD A Y+ + G G KE+V+L
Sbjct: 358 TYRVLLDLYGRQGRFDGVRQLFREM--RTAVPPDTATYNVLFRVFGDGGFFKEVVELFHD 415
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + ++PD+V V+ AC V + + + G+ P+A
Sbjct: 416 MLKTG---------------VQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTA 460
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
Y LV A EA A M + G + T Y LA
Sbjct: 461 DAY------------TGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARG 508
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD--------- 460
G +Q+A + ++ + + + +F LI + G +DD + + M+
Sbjct: 509 GLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERS 568
Query: 461 -------HC--------------------EPNIGTVNAMLKVYSRNDMFSKAKELFEE-- 491
+C P++ ML +Y+RND ++ A +L EE
Sbjct: 569 LEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARNDRWTDAYDLLEEMK 628
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
T RA+S+ A L EY SS W+ EYV + + GC
Sbjct: 629 TNRASSTHQVI-----ASLIKGEYDDSS---------NWQMVEYVLENSTMEGC 668
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 111/310 (35%), Gaps = 37/310 (11%)
Query: 310 LEPDLVVYNAVLNAC-------VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
+ P YN VL AC VP G+F + ++P + +Y
Sbjct: 205 VAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASPSVRPD-------LTTYNTL 257
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
L VR+ ++ ++ + M + GV Y + + G A + ++
Sbjct: 258 LAAAAVRSLADQSEM-----LLHTMLEAGVSPDTVSYRHIVDAFASAGNLSRAAELFSEM 312
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDM 481
+ H+ + GL+ + G D +++ + M+ D C P T +L +Y R
Sbjct: 313 AATGHTADAS-AYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYGRQGR 371
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
F ++LF E A + PD TY+ + ++ ++ M
Sbjct: 372 FDGVRQLFREMRTA--------------VPPDTATYNVLFRVFGDGGFFKEVVELFHDML 417
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-Y 600
+G Q D ++ G + + G +P +T L++A+ + Y
Sbjct: 418 KTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTG-LVEALGHAAMY 476
Query: 601 EKAVALINAM 610
E+A N M
Sbjct: 477 EEAYVAFNMM 486
>gi|357123530|ref|XP_003563463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Brachypodium distachyon]
Length = 862
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 167/465 (35%), Gaps = 98/465 (21%)
Query: 159 RVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG 218
R +VD + ++ + R M +G L L++ G+ +A++VL
Sbjct: 284 RHIVDAFARAGDLSRVAELFREMADTGHTPDPSAYLGLMEAHTRVGATAEAVAVLRQ--- 340
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
++ + Y LL + G+ GR +F M + PD A Y+ + G G
Sbjct: 341 MQADGCAPTAATYRVLLDLYGRQGRFDGVRELFREM--RTAVPPDTATYNVLFSVFGDGG 398
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
KE+V+L M + +EPD+ VL AC + V
Sbjct: 399 FFKEVVELFHDMLRTG---------------IEPDMETCEGVLVACGQGGLHEDAREVLD 443
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
+ K G+ P+A Y LV A EA A M + G + T
Sbjct: 444 YITKEGMVPTAKAY------------TGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIET 491
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
Y LA G +Q+A + ++ + + + +F LI + G +DD + + M
Sbjct: 492 YNSLANVFAKGGLFQEAESIFSRMTNSAGIQKNKDSFDALIEAYCQGAQLDDAVKAYMEM 551
Query: 459 KD----------------HC--------------------EPNIGTVNAMLKVYSRNDMF 482
+ +C P+I ML +Y+RND +
Sbjct: 552 RKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEEIQSNMAVPSIIAYCMMLSLYARNDRW 611
Query: 483 SKAKELFEE--TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
+ A +L EE T RA+S+ A + EY SS W+ EY
Sbjct: 612 ADAYDLLEEMKTNRASSTHQVI-----ASMIQGEYDDSS---------NWQMVEYALDSS 657
Query: 541 ALSGCQ---------LDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
L GC LD W + +RA + +L+HA +S L
Sbjct: 658 NLEGCDYSLRFFNALLDVL---WWFGQKARAAR--VLDHAVNSGL 697
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/460 (18%), Positives = 166/460 (36%), Gaps = 60/460 (13%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+DRLS A R + + T + + +G W++++ + ++
Sbjct: 71 LIDRLSN---LAPRGSIARCLETARHRLTLQDFAAVYREFSRRGDWQRSVRLFKYMQRQS 127
Query: 221 DKRDLKSRFVYTKLLAILGKAGRP--HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
R ++ ++ +LG+ G + L +F+ + D +Y S+ +
Sbjct: 128 WCR--PDEHIHAIVIGVLGRQGPALLDKCLEVFHDLPADSR---TALSYTSLIAAYARNA 182
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC-------VPSHQWK 331
L +E L+++M+ + P YN VL AC VP
Sbjct: 183 LHEEARALLDQMKAAG---------------VAPTAATYNTVLAACARATDPPVPFDMLL 227
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
G+F + ++P + +Y L VR+ ++ ++ +R M + G
Sbjct: 228 GLFAEMRHDVSPAVRPD-------LTTYNTLLAAAAVRSLNDQAEM-----LLRAMLEAG 275
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
V+ + Y + G + ++ H+ P + GL+ + G +
Sbjct: 276 VLPDTASYRHIVDAFARAGDLSRVAELFREMADTGHT-PDPSAYLGLMEAHTRVGATAEA 334
Query: 452 ISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 510
+++ + M+ D C P T +L +Y R F +ELF E A +
Sbjct: 335 VAVLRQMQADGCAPTAATYRVLLDLYGRQGRFDGVRELFREMRTA--------------V 380
Query: 511 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 570
PD TY+ + ++ ++ M +G + D +LV + G
Sbjct: 381 PPDTATYNVLFSVFGDGGFFKEVVELFHDMLRTGIEPDMETCEGVLVACGQGGLHEDARE 440
Query: 571 AFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
D + + G +P +T ++ + YE+A N M
Sbjct: 441 VLDYITKEGMVPTAKAYTGLVEALGHAAMYEEAYVAFNMM 480
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/468 (19%), Positives = 184/468 (39%), Gaps = 50/468 (10%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R EA L+ L + T+ V R M + M LLKGL D+
Sbjct: 115 KKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRS 174
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++A+ +L + + YT ++ K G +A ++ ML D + PD+
Sbjct: 175 QEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEML-DRRISPDVVT 233
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y S+ L + + + ++++ M +KN + P+ + YN++L+
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTTM-------VKNG--------VMPNCMTYNSILHGYCS 278
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRN 386
S Q K K++R G++P TY M+ + G+ EA +
Sbjct: 279 SEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY------------LCKNGRSTEARKIFDS 326
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL---RHSKPLEITFTGLIISSM 443
M +RG+ + Y C L + A++ + + L P F LI +
Sbjct: 327 MTKRGLEPDIATY----CTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382
Query: 444 DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
+D+ + +F M+ H PN+ T A++ + ++ A FE+
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG------ 436
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
L P+ Y+S++ + +W+ E + M G L+ ++ +
Sbjct: 437 -------LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKE 489
Query: 563 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
G+ E FD ++ G P+ + ++ ++ + ++A L+++M
Sbjct: 490 GRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 156/435 (35%), Gaps = 103/435 (23%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L K GR EA +IF+ M + L PDIA Y ++ G L E+ L++ M
Sbjct: 304 YNSLMDYLCKNGRSTEARKIFDSMTKR-GLEPDIATYCTLLQGYATKGALVEMHALLDLM 362
Query: 291 RQK---PSKRIKNM-----------------HRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
+ P + N+ K L P++V Y AV+ S
Sbjct: 363 VRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSV 422
Query: 331 KGVFWVFKQLRKSGLKPSAATYG-----------------LAMESYRR--CLLKV----L 367
F+Q+ GL P+ Y L +E R CL + +
Sbjct: 423 DDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
+ + +EG++ E+ M + GV Y L C G+ +A ++ + S+
Sbjct: 483 IHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV-G 541
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK------------ 474
KP +T+ LI +DD +++F+ M PNI T N +L+
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601
Query: 475 -VY----------------------SRNDMFSKAKELFE--------------------- 490
+Y +N++ +A +F+
Sbjct: 602 ELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGAL 661
Query: 491 -ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
+ R + + F++ L P+ +TY M E E + ++ M +GC +D
Sbjct: 662 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDS 721
Query: 550 TKHAWLLVEASRAGK 564
+++ E + G+
Sbjct: 722 GMLNFIVRELLQRGE 736
>gi|414888267|tpg|DAA64281.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 873
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 128/354 (36%), Gaps = 81/354 (22%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G+ GR ++F M + PD A Y+ + G G KE+V+L
Sbjct: 358 TYRVLLDLYGRQGRFDGVRQLFREM--RTAVPPDTATYNVLFRVFGDGGFFKEVVELFHD 415
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + ++PD+V V+ AC V + + + G+ P+A
Sbjct: 416 MLKTG---------------VQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTA 460
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
Y LV A EA A M + G + T Y LA
Sbjct: 461 DAY------------TGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARG 508
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD--------- 460
G +Q+A + ++ + + + +F LI + G +DD + + M+
Sbjct: 509 GLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERS 568
Query: 461 -------HC--------------------EPNIGTVNAMLKVYSRNDMFSKAKELFEE-- 491
+C P++ ML +Y+RND ++ A +L EE
Sbjct: 569 LEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARNDRWTDAYDLLEEMK 628
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
T RA+S+ A L EY SS W+ EYV + + GC
Sbjct: 629 TNRASSTHQVI-----ASLIKGEYDDSS---------NWQMVEYVLENSTMEGC 668
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 110/310 (35%), Gaps = 37/310 (11%)
Query: 310 LEPDLVVYNAVLNAC-------VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
+ P YN VL AC VP G+F + ++P TY
Sbjct: 205 VAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASPSVRPDLTTYNT-------L 257
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
L VR+ ++ ++ + M + GV Y + + G A + ++
Sbjct: 258 LAAAAVRSLADQSEM-----LLHTMLEAGVSPDTVSYRHIVDAFASAGNLSRAAELFSEM 312
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDM 481
+ H+ + GL+ + G D +++ + M+ D C P T +L +Y R
Sbjct: 313 AATGHTADAS-AYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYGRQGR 371
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
F ++LF E A + PD TY+ + ++ ++ M
Sbjct: 372 FDGVRQLFREMRTA--------------VPPDTATYNVLFRVFGDGGFFKEVVELFHDML 417
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-Y 600
+G Q D ++ G + + G +P +T L++A+ + Y
Sbjct: 418 KTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTG-LVEALGHAAMY 476
Query: 601 EKAVALINAM 610
E+A N M
Sbjct: 477 EEAYVAFNMM 486
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 153/384 (39%), Gaps = 54/384 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
V ++A G++ R H+ + F L+ P+ Y V +L + G + ++L++
Sbjct: 15 LVSNAVIAAYGRSSRIHKVMDEFQ-ELDKHGSKPNAYTYKCVIQSLVKAGNVVLAMELLD 73
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M + LEPD ++ N VL+ ++ +F ++ G
Sbjct: 74 KMIKTG---------------LEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGCPAD 118
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY + + S RC + EA ME+RG +A Y + C
Sbjct: 119 DYTYAILIRSLGRC------------KRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCK 166
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
GR + AM+V++K+ ++ P + T LI + G + IF+ M K N
Sbjct: 167 AGRIESAMVVLKKMLD-KNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTV 225
Query: 468 TVNAMLKVYSRNDMFSKAKELFEET----TRANSSGY-TFLSGDG--------------- 507
+ NAML + A + +E + NS + T ++ G
Sbjct: 226 SFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEM 285
Query: 508 --APLKPDEYTYSSMLEASATA-HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
A L PD +TY+ M+EA A A + + FE ++ M +GC + + L+ +AG+
Sbjct: 286 RSAGLTPDVFTYTCMIEAFAKAGNMGKAFE-MFGDMEKAGCSANVVTYNLLIDALVKAGR 344
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFT 588
+ + + G +P + T
Sbjct: 345 YQDARDIYFDMKKKGILPDAITAT 368
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 153/373 (41%), Gaps = 45/373 (12%)
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
++V NAV+ A S + V F++L K G KP+A TY +C+++ LV+A
Sbjct: 14 VLVSNAVIAAYGRSSRIHKVMDEFQELDKHGSKPNAYTY--------KCVIQSLVKA--- 62
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN---NGRWQDAMLVVEKIKSLRHSKP 430
G + A+ + M + G+ E LCN +G + A ++ E K K
Sbjct: 63 -GNVVLAMELLDKMIKTGL--------EPDTLLCNVVLDGLGK-ANMMDEACKLFASMKS 112
Query: 431 L-----EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
+ + T+ LI S ++ +F M++ C P+ ++ +Y +
Sbjct: 113 MGCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIES 172
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A + ++ N L PD+YT +S++ A + + E +++ M SG
Sbjct: 173 AMVVLKKMLDKN-------------LAPDDYTLNSLITAVSRTGRTELACEIFERMKKSG 219
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKA 603
++ +L +AGK L D + G P+ + F LI + ++ Y +A
Sbjct: 220 VAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNT-LINCLGRAKYASEA 278
Query: 604 VALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA 663
++ M A +T + E+ + K ++ + +++ +T + L A
Sbjct: 279 YKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDA 338
Query: 664 LHALCRSEKERDL 676
L R + RD+
Sbjct: 339 LVKAGRYQDARDI 351
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 154/406 (37%), Gaps = 61/406 (15%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
+ Q ++ +W L++ S Y +++ + GKAG EA+ FN M ED PD
Sbjct: 126 FPQTLAFFNWATNLEEFG--HSPEPYMEMIDLAGKAGLAAEAVHAFNRM-EDYGCKPDKI 182
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
A+ V +L + E + ++ + EPD+VVY ++++
Sbjct: 183 AFSVVISSLSKKRRAIEAQSFFDSLKDR----------------FEPDVVVYTSLVHGWC 226
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
+ VF +++ +G++P+ TY +++ A G+I A
Sbjct: 227 RAGNISEAERVFGEMKMAGIQPNVYTYS------------IVIDALCRSGQITRAHDVFS 274
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M G A + L GR + + V ++K L P IT+ LI S
Sbjct: 275 EMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRL-GCPPDAITYNFLIESHCRD 333
Query: 446 GHIDDCISIFQHMKDHC-------EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
++++ + I +K C P G ++ + V S + MF+K K+L R N+
Sbjct: 334 DNLEEAVKILNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDL---KCRPNTV 390
Query: 499 GYTFL------------------SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
Y L D ++P+ TY ++ W +K M
Sbjct: 391 TYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEM 450
Query: 541 ALSGC-QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
C + + +L + +AG+ E + ++ G + PL
Sbjct: 451 IEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRPL 496
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 102/261 (39%), Gaps = 43/261 (16%)
Query: 418 VVEKIKSLRHSKPLEIT-------------------FTGLIISSMDGGHIDDCISIFQHM 458
V+EK +RH P T + +I + G + + F M
Sbjct: 113 VIEKCGGVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKAGLAAEAVHAFNRM 172
Query: 459 KDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
+D+ C+P+ + ++ S+ +A+ F+ +PD Y
Sbjct: 173 EDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR--------------FEPDVVVY 218
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+S++ A E V+ M ++G Q + ++ ++ R+G+ F +++
Sbjct: 219 TSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMID 278
Query: 578 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNEDRIS 634
G P+ + F ++ + EK + + N M P IT + L ES+ +
Sbjct: 279 VGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAIT---YNFLIESHCRDDN 335
Query: 635 RDKLEKLLNAL---CNCNAAS 652
++ K+LN++ CN NA+S
Sbjct: 336 LEEAVKILNSVKKGCNLNASS 356
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 131/298 (43%), Gaps = 47/298 (15%)
Query: 304 KNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K WD ++ +PD++ +N +++A Q+K ++ QL +S P+ T
Sbjct: 155 KKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDT 214
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV----VGTASVYYELACCLC 407
Y L L++A+ G I A + M+ V +G + +
Sbjct: 215 YAL------------LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMK 262
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS--IFQHMKDH-CEP 464
G ++A+ V +++K R KP T+ +I ++ G +S ++ M+ H C+P
Sbjct: 263 RKGNTEEAIDVFQRMKRDR-CKPTTETYNLMI--NLYGKASKSYMSWKLYCEMRSHQCKP 319
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
NI T A++ ++R + KA+E+FE+ L DG L+PD Y Y++++E+
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQ-----------LQEDG--LEPDVYVYNALMESY 366
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ A ++ M GC+ D+ + ++ RAG E F+ + G P
Sbjct: 367 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAP 424
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 145/362 (40%), Gaps = 52/362 (14%)
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLY 261
KG+ +A+ V +K R + Y ++ + GKA + + + +++ M C
Sbjct: 264 KGNTEEAIDVFQ---RMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCK-- 318
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P+I Y ++ + GL ++ ++ E++++ LEPD+ VYNA++
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDG---------------LEPDVYVYNALM 363
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
+ + G +F ++ G +P A+Y + +++Y R L A +EE
Sbjct: 364 ESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEE------- 416
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
M++ G+ T + L L + +D +K + + TF +
Sbjct: 417 -----MKRLGIAPTMKSHMLL---LSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 468
Query: 442 SMDG--GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
++ G G I M++ C +I T N ++ +Y + + +ELF E N
Sbjct: 469 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKN-- 526
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
+PD T++S + A + + V++ M SGC D LL
Sbjct: 527 -----------FRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 575
Query: 559 AS 560
S
Sbjct: 576 CS 577
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 105/280 (37%), Gaps = 44/280 (15%)
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
VF+++++ KP+ TY L + Y + + + E + ++ +
Sbjct: 273 VFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNI----------- 321
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH---IDDCI 452
Y L G + A + E+++ +P + L+ S G+ +
Sbjct: 322 -CTYTALVNAFAREGLCEKAEEIFEQLQE-DGLEPDVYVYNALMESYSRAGYPYGAAEIF 379
Query: 453 SIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS-----------SGYT 501
S+ QHM CEP+ + N M+ Y R + S A+ +FEE R S Y+
Sbjct: 380 SLMQHMG--CEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 437
Query: 502 F-------------LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+S +G ++PD + +SML Q+ E + M C D
Sbjct: 438 KARDVTKCEAIVKEMSENG--VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTAD 495
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ + L+ +AG +E F L E P + +T
Sbjct: 496 ISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 535
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 158/429 (36%), Gaps = 55/429 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
++ + GKA P EA+ F+ M D + + +++SV + Q G K
Sbjct: 102 IFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLH 161
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ SK +P+L+ YN ++ A Q F+++ P
Sbjct: 162 VFGANSKG------------FQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDV 209
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L+ +E +++EAV + M+ G + + L L N
Sbjct: 210 FTYS------------TLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKN 257
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
G A +V+ + L+ P E+T+ LI G +D +S+ + M C PN T
Sbjct: 258 GDLSRAAKLVDNM-FLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVT 316
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
++ + RA + +S + K +EY YSS++
Sbjct: 317 YGTIINGLVKQ-------------RRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEG 363
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ E ++K MA GC+ + + + R K E +L G +P+ ++
Sbjct: 364 KSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYS 423
Query: 589 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNC 648
++ + + +KA+ + W E+ S + R + LLN LC
Sbjct: 424 SLMKGFFKKGDSQKAILV---------------WKEMM-SQDMRHNVVCCSVLLNGLCES 467
Query: 649 NAASSEITV 657
+TV
Sbjct: 468 GRLREALTV 476
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 21/215 (9%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
EK + +D L E + ++ M G + L+KG KG +
Sbjct: 377 EKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQ 436
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTK-LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+A +L W + +D++ V LL L ++GR EAL ++ ML + L PD+ A
Sbjct: 437 KA--ILVWKEMMS--QDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGE-GLKPDVVA 491
Query: 267 YHSVAVTLGQVGLLKELVKLIERMR-QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y S+ L VG + + +KL M+ Q+P R PD+V YN + NA
Sbjct: 492 YSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSR--------------PDVVTYNILFNALC 537
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+ + G P + T + +E+ R
Sbjct: 538 RQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLR 572
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 91/461 (19%), Positives = 170/461 (36%), Gaps = 94/461 (20%)
Query: 133 QLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQ 192
+LG F + +E + R E I ++DR+ F+ I G G+
Sbjct: 62 KLGDATFYRLIENYATSR---EFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGE 118
Query: 193 MLKLLKGLGDKGSWRQAM----SVLDW----------------VYGLKDKRDLKSRFVYT 232
+ + + +Q + SVL+ V+G K + Y
Sbjct: 119 AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYN 178
Query: 233 KLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
++ L K G+ A+ F M L++CN PD+ Y ++ L + + E V L++ M+
Sbjct: 179 LIIKALCKLGQIDRAVDTFREMPLKNCN--PDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 236
Query: 292 ------------------------QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+ +K + NM K P+ V YN +++
Sbjct: 237 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGC----VPNEVTYNTLIHGLCLK 292
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ + +++ S P+ TYG ++ ++ + + V + +M
Sbjct: 293 GKLDKALSLLEKMVSSKCVPNQVTYG------------TIINGLVKQRRAEDGVHILMSM 340
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
E+RG +Y L L G+ ++A+ + +++ + KP + + I
Sbjct: 341 EERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE-KGCKPNVVVYGAFIDGLCRDEK 399
Query: 448 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA----KELFEETTRAN------ 496
D+ I Q M PN T ++++K + + KA KE+ + R N
Sbjct: 400 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 459
Query: 497 ------SSG--------YTFLSGDGAPLKPDEYTYSSMLEA 523
SG +T + G+G LKPD YSSM++
Sbjct: 460 LLNGLCESGRLREALTVWTHMLGEG--LKPDVVAYSSMIKG 498
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 133/344 (38%), Gaps = 44/344 (12%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
VL+D LS+ ++ K V M G + E L+ GL KG +A+S+L+
Sbjct: 246 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLE-- 303
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
+ + + ++ Y ++ L K R + + I + +E+ + Y S+ L +
Sbjct: 304 -KMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHIL-MSMEERGQKANEYIYSSLISGLFK 361
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G + V+L + M +K K P++VVY A ++ + +
Sbjct: 362 EGKSENAVRLWKEMAEKGCK---------------PNVVVYGAFIDGLCRDEKPDEAEDI 406
Query: 337 FKQLRKSGLKPSAATYGLAMESYRR-----------------------CLLKVLVRAFWE 373
+++ G P+A TY M+ + + VL+ E
Sbjct: 407 LQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCE 466
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR-HSKPLE 432
G++ EA+ +M G+ Y + LC+ G + + +++ S+P
Sbjct: 467 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDV 526
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 475
+T+ L + ++ I + M D C+P+ T N L+
Sbjct: 527 VTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLET 570
>gi|298707694|emb|CBJ26011.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1173
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 43/297 (14%)
Query: 204 GSWRQAMSV---LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNL 260
G WR+A+++ ++ G+ L + + ++ AGRP EAL + ML L
Sbjct: 349 GEWREALALAKRMEQADGV-----LPNVVTFNSVIGACKTAGRPEEALAVLG-MLRRKGL 402
Query: 261 YPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAV 320
PD+ +++S G + ++L+E M PS+ + PDL+ YN
Sbjct: 403 QPDVISFNSAIGACASGGKWEVALQLLELM---PSEGVT------------PDLMTYNIA 447
Query: 321 LNACVPSHQWKGVFWVFKQLRKSG---LKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
L+ACV QW+ +F +L SG L+P TY L+ F + G +
Sbjct: 448 LDACVKGGQWEMAMSLFDELVASGDESLRPDLYTY------------NTLMTVFSDAGML 495
Query: 378 NEAVAAVRNMEQRGVVGTASVYYEL--ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
A+ + + + + Y L AC + A+ +V +++ +P T+
Sbjct: 496 PRALELLEEAKAKRLRPDVVTYSTLIRACERSMPSQPDVALKLVSDMEA-EGVRPNNTTY 554
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVN-AMLKVYSRNDMFSKAKELFEE 491
G+ IS +C+ + + M P A+LKV R D+ +A LFEE
Sbjct: 555 VGVAISLGRSARPLECLDLLRSMHGKGTPPDAICYLAVLKVLDRWDLAEEASLLFEE 611
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 128/322 (39%), Gaps = 82/322 (25%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
W+QA+ +LD + ++ V L+ K G+ A ++ M E + P++
Sbjct: 280 WQQAIRLLDDMSAAGVAPNV---VVVNTALSACAKCGQVSRATQLLQEMQEKYGVAPEVR 336
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
+Y+SV + G +E + L +RM Q D VL P++V +N+V+ AC
Sbjct: 337 SYNSVISGHERAGEWREALALAKRMEQA-------------DGVL-PNVVTFNSVIGACK 382
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
+ + + V LR+ GL+P ++ N A+ A
Sbjct: 383 TAGRPEEALAVLGMLRRKGLQPDVISF-------------------------NSAIGAC- 416
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
+ G+W+ A+ ++E + S P +T+ + + + G
Sbjct: 417 ---------------------ASGGKWEVALQLLELMPS-EGVTPDLMTYNIALDACVKG 454
Query: 446 GHIDDCISIFQHM----KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
G + +S+F + + P++ T N ++ V+S M +A EL EE
Sbjct: 455 GQWEMAMSLFDELVASGDESLRPDLYTYNTLMTVFSDAGMLPRALELLEEAKAKR----- 509
Query: 502 FLSGDGAPLKPDEYTYSSMLEA 523
L+PD TYS+++ A
Sbjct: 510 --------LRPDVVTYSTLIRA 523
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/338 (18%), Positives = 137/338 (40%), Gaps = 41/338 (12%)
Query: 222 KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLK 281
K +L +Y L L + + AL +F M D + PD +Y V + G K
Sbjct: 160 KGELPRIALYNTALRALDRCKKWRLALSVFREMQSD-GVDPDRDSYFFVMSACSKRGEAK 218
Query: 282 ELVKLIERMRQKPSKRIKNMHR-------------KNWDPVLEPDLVVYNAVLNACVPSH 328
+ L+ M+ + ++ + + ++ D PDL++Y V+ AC
Sbjct: 219 TALALLAEMKARRRQQQQQQQQQRAGGGPGGYGEVEDEDGAPAPDLLLYAVVMKACAWGK 278
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+W+ + + +G+ P+ A+ + +C G+++ A ++ M+
Sbjct: 279 RWQQAIRLLDDMSAAGVAPNVVVVNTALSACAKC------------GQVSRATQLLQEMQ 326
Query: 389 QR-GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
++ GV Y + G W++A+ + ++++ P +TF +I + G
Sbjct: 327 EKYGVAPEVRSYNSVISGHERAGEWREALALAKRMEQADGVLPNVVTFNSVIGACKTAGR 386
Query: 448 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
++ +++ + + +P++ + N+ + + + A +L E + +
Sbjct: 387 PEEALAVLGMLRRKGLQPDVISFNSAIGACASGGKWEVALQLLE-----------LMPSE 435
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
G + PD TY+ L+A QWE ++ + SG
Sbjct: 436 G--VTPDLMTYNIALDACVKGGQWEMAMSLFDELVASG 471
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 178/452 (39%), Gaps = 69/452 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL D + +QA+ +L + K + L YT ++ L + G+ +A +F+ ML
Sbjct: 176 LLKGLCDDKTSQQALDLLHIMADHKGRCPLDV-VAYTTVINGLLREGQLDKAYSLFDAML 234
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---------------------KP 294
D PD+ Y S+ L + + + ++ RM + KP
Sbjct: 235 -DRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKP 293
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ I + +K +EPD+V Y A+++ + + +F L K G KP + TYG
Sbjct: 294 KEAI-GIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGT 352
Query: 355 AMESYR-----------------------RCLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
+ Y + +++ A+ + K++EA+ NM Q+G
Sbjct: 353 LLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQG 412
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
+ Y + LC GR DA+ +KS P + FT LI D
Sbjct: 413 LNPDIVNYGTVLDILCTAGRVDDALSQFNSLKS-EGLAPNIVVFTTLIHGLCTCDKWDKV 471
Query: 452 ISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
+ M D C I NA++ + +AK LF+ R
Sbjct: 472 EELAFEMIDRGICLDTI-FFNAIMGNLCKKGRVIEAKNLFDLMVRIG------------- 517
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
++P+ TY+++++ + + + M +G + + ++ S+ G+ +E
Sbjct: 518 IEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGR---IE 574
Query: 570 HAFDSLLEA-GEIPHPLFFT-EMLIQAIVQSN 599
L E G+ +P T EML+Q + Q+
Sbjct: 575 DGLTLLREMDGKGVNPGIVTYEMLLQGLFQAG 606
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 117/297 (39%), Gaps = 66/297 (22%)
Query: 336 VFKQLRKSGLK---PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+F ++ ++G P+ ATYG+ + RR G+++ A A V + G+
Sbjct: 83 LFNRMPRAGATSAAPNIATYGIVIGCCRRL------------GRLDLAFATVGRVITTGL 130
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEK-----------------IKSLRHSK------ 429
+ ++ L LC+ R DAM +V + +K L K
Sbjct: 131 RMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQAL 190
Query: 430 -------------PLEIT-FTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLK 474
PL++ +T +I + G +D S+F M D P++ T ++++
Sbjct: 191 DLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIIS 250
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
S+ KA ++F TR +G + PD Y+S++ ++ + +
Sbjct: 251 ALSKTQAMDKATQVF---TRMVKNG----------VMPDCIMYTSLVHGYCSSGKPKEAI 297
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
++K M G + D + L+ + GK FDSL++ G P + +L
Sbjct: 298 GIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLL 354
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 100/491 (20%), Positives = 184/491 (37%), Gaps = 89/491 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G G +A+ + D G + + Y L+ KA + EA RI M+
Sbjct: 126 LLHGFCKVGKLDEALKIFD---GAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV 182
Query: 256 EDCNLYPDIAAYHSVAVTL---GQV------------------------GLLKELVKLIE 288
+ +L PD+ Y+S+ L G+V GL +EL +L E
Sbjct: 183 SE-SLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRL-E 240
Query: 289 RMRQKPSKRIKNMHR-----------------------KNWDPVL----EPDLVVYNAVL 321
RQ K + N + K + VL EP++ YN ++
Sbjct: 241 SARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILI 300
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
+ + + F +F L K GL+P A TY V + + G++ +A+
Sbjct: 301 DGLLKEDRVNEAFELFSGLVKHGLEPDAITY------------TVFIDGLCKAGRVEDAL 348
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
+++M+++G V + + LC R +A +++ +++ + P I+F LI
Sbjct: 349 LMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA-KGCSPNAISFNTLICG 407
Query: 442 SMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE---LFEETTRANS 497
G ++ F+ M K +P + T N ++ + + KE LF+
Sbjct: 408 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 467
Query: 498 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 557
PD TYS++++ A + + + M GC + + L+
Sbjct: 468 V-------------PDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLIS 514
Query: 558 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHI 617
K F +++E G +P + + ++ Q +KA+AL + A
Sbjct: 515 GLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVP 574
Query: 618 TERQWTELFES 628
T + L +
Sbjct: 575 TSGMYFSLIDG 585
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 162/411 (39%), Gaps = 59/411 (14%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+R Y LL+ L GR +A ++ M++ PD+ Y+++ +VG L E +K+
Sbjct: 84 NRITYNALLSGLCNGGRMSDAQALYERMIK-AGYSPDVVTYNTLLHGFCKVGKLDEALKI 142
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ ++ PD+V YNA++N + + + +++ L
Sbjct: 143 FDGAVKRG---------------FVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLV 187
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P TY LV + G+++EA + + +G Y L L
Sbjct: 188 PDVVTY------------NSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGL 232
Query: 407 CNN-GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEP 464
C R + A ++EK+ L KP +++ LI + + + +F ++ EP
Sbjct: 233 CRELRRLESARQLLEKM-VLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEP 291
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTR----ANSSGYT-FLSG-------------- 505
+ T N ++ + D ++A ELF + ++ YT F+ G
Sbjct: 292 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 351
Query: 506 ---DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
D PD ++++++ + + E + GM GC + L+ RA
Sbjct: 352 KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRA 411
Query: 563 GKCHLLEHAFDSLLEAGEIPHPLFF---TEMLIQAIVQSNYEKAVALINAM 610
GK F +L+ G P + + + L +A + ++A+ L +AM
Sbjct: 412 GKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAM 462
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 151/398 (37%), Gaps = 58/398 (14%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L +A R +A +F+ M + +P+ Y+++ L G + + L ERM
Sbjct: 60 LCRASRIGDAQTVFDGMRKH-GFWPNRITYNALLSGLCNGGRMSDAQALYERM------- 111
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
IK + PD+V YN +L+ + +F K G P TY
Sbjct: 112 IKAGY--------SPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTY----- 158
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-M 416
L+ F + K++EA ++ M +V Y L LC NGR +A M
Sbjct: 159 -------NALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARM 211
Query: 417 LVVEKIKSLRHSKPLEITFTGLIIS-SMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLK 474
L+V+K S P IT++ LI + ++ + + M + C+P+I + NA++
Sbjct: 212 LIVDKGFS-----PNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIH 266
Query: 475 VYSRNDMFSKAKELFEETTRAN---------------------SSGYTFLSG-DGAPLKP 512
+R S+A +LF R + + SG L+P
Sbjct: 267 GLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEP 326
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
D TY+ ++ A + E + K M GC D H ++ + + E
Sbjct: 327 DAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLL 386
Query: 573 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ G P+ + F ++ ++KA+ M
Sbjct: 387 SGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM 424
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 36/225 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKA---GRPHEALRIF 251
L+ G G W++AM+ + KR +K V Y L+ L KA GR EA+ +F
Sbjct: 404 LICGQCRAGKWKKAMTTFKEML----KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLF 459
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
+ M+E + PD+ Y ++ LG+ G L + +L+ M K
Sbjct: 460 DAMIEKGRV-PDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCI--------------- 503
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P++ YN++++ + +F + + G P TYG ++ A
Sbjct: 504 PNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYG------------TIISAL 551
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
++ +++A+A + GVV T+ +Y+ L LC R +A+
Sbjct: 552 CKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEAL 596
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 15/159 (9%)
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+ + +I +A M + G Y L LCN GR DA + E++
Sbjct: 55 IYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKA 114
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSK 484
+S P +T+ L+ G +D+ + IF +K P++ T NA++ + + D +
Sbjct: 115 GYS-PDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDE 173
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
A+ + + + L PD TY+S++
Sbjct: 174 AQRILQRMVSES-------------LVPDVVTYNSLVNG 199
Score = 42.7 bits (99), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 100/262 (38%), Gaps = 22/262 (8%)
Query: 406 LCNNGRWQDAMLVVEK--IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE 463
L +G+ + A VE+ +K L I +GL +S I D ++F M+ H
Sbjct: 26 LLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRAS----RIGDAQTVFDGMRKHGF 81
Query: 464 -PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
PN T NA+L S A+ L+E +A GY+ PD TY+++L
Sbjct: 82 WPNRITYNALLSGLCNGGRMSDAQALYERMIKA---GYS----------PDVVTYNTLLH 128
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ + ++ G G D + L+ +A K + ++ +P
Sbjct: 129 GFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVP 188
Query: 583 HPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRI--SRDKLEK 640
+ + ++ ++A LI ++P IT R+ +R LEK
Sbjct: 189 DVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEK 248
Query: 641 LLNALCNCNAASSEITVSNLSR 662
++ C + S + L+R
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAR 270
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 158/429 (36%), Gaps = 55/429 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
++ + GKA P EA+ F+ M D + + +++SV + Q G K
Sbjct: 126 IFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLH 185
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ SK +P+L+ YN ++ A Q F+++ P
Sbjct: 186 VFGANSKG------------FQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDV 233
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L+ +E +++EAV + M+ G + + L L N
Sbjct: 234 FTYS------------TLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKN 281
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
G A +V+ + L+ P E+T+ LI G +D +S+ + M C PN T
Sbjct: 282 GDLSRAAKLVDNM-FLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVT 340
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
++ + RA + +S + K +EY YSS++
Sbjct: 341 YGTIINGLVKQ-------------RRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEG 387
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ E ++K MA GC+ + + + R K E +L G +P+ ++
Sbjct: 388 KSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYS 447
Query: 589 EMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNC 648
++ + + +KA+ + W E+ S + R + LLN LC
Sbjct: 448 SLMKGFFKKGDSQKAILV---------------WKEMM-SQDMRHNVVCCSVLLNGLCES 491
Query: 649 NAASSEITV 657
+TV
Sbjct: 492 GRLREALTV 500
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 21/215 (9%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
EK + +D L E + ++ M G + L+KG KG +
Sbjct: 401 EKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQ 460
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTK-LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+A +L W + +D++ V LL L ++GR EAL ++ ML + L PD+ A
Sbjct: 461 KA--ILVWKEMMS--QDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGE-GLKPDVVA 515
Query: 267 YHSVAVTLGQVGLLKELVKLIERMR-QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y S+ L VG + + +KL M+ Q+P R PD+V YN + NA
Sbjct: 516 YSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSR--------------PDVVTYNILFNALC 561
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+ + G P + T + +E+ R
Sbjct: 562 RQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLR 596
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 91/461 (19%), Positives = 170/461 (36%), Gaps = 94/461 (20%)
Query: 133 QLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQ 192
+LG F + +E + R E I ++DR+ F+ I G G+
Sbjct: 86 KLGDATFYRLIENYATSR---EFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGE 142
Query: 193 MLKLLKGLGDKGSWRQAM----SVLDW----------------VYGLKDKRDLKSRFVYT 232
+ + + +Q + SVL+ V+G K + Y
Sbjct: 143 AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYN 202
Query: 233 KLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
++ L K G+ A+ F M L++CN PD+ Y ++ L + + E V L++ M+
Sbjct: 203 LIIKALCKLGQIDRAVDTFREMPLKNCN--PDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 260
Query: 292 ------------------------QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+ +K + NM K P+ V YN +++
Sbjct: 261 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGC----VPNEVTYNTLIHGLCLK 316
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ + +++ S P+ TYG ++ ++ + + V + +M
Sbjct: 317 GKLDKALSLLEKMVSSKCVPNQVTYG------------TIINGLVKQRRAEDGVHILMSM 364
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
E+RG +Y L L G+ ++A+ + +++ + KP + + I
Sbjct: 365 EERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE-KGCKPNVVVYGAFIDGLCRDEK 423
Query: 448 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA----KELFEETTRAN------ 496
D+ I Q M PN T ++++K + + KA KE+ + R N
Sbjct: 424 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 483
Query: 497 ------SSG--------YTFLSGDGAPLKPDEYTYSSMLEA 523
SG +T + G+G LKPD YSSM++
Sbjct: 484 LLNGLCESGRLREALTVWTHMLGEG--LKPDVVAYSSMIKG 522
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 133/344 (38%), Gaps = 44/344 (12%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
VL+D LS+ ++ K V M G + E L+ GL KG +A+S+L+
Sbjct: 270 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLE-- 327
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
+ + + ++ Y ++ L K R + + I + +E+ + Y S+ L +
Sbjct: 328 -KMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHIL-MSMEERGQKANEYIYSSLISGLFK 385
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G + V+L + M +K K P++VVY A ++ + +
Sbjct: 386 EGKSENAVRLWKEMAEKGCK---------------PNVVVYGAFIDGLCRDEKPDEAEDI 430
Query: 337 FKQLRKSGLKPSAATYGLAMESYRR-----------------------CLLKVLVRAFWE 373
+++ G P+A TY M+ + + VL+ E
Sbjct: 431 LQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCE 490
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR-HSKPLE 432
G++ EA+ +M G+ Y + LC+ G + + +++ S+P
Sbjct: 491 SGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDV 550
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 475
+T+ L + ++ I + M D C+P+ T N L+
Sbjct: 551 VTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLET 594
>gi|302819136|ref|XP_002991239.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
gi|300140950|gb|EFJ07667.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
Length = 561
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 101/472 (21%), Positives = 192/472 (40%), Gaps = 65/472 (13%)
Query: 85 WER--IERLKFRQLASESKEFAGD-NLKRENLRELKEMFEKDLNWVLDDDVQLGSDYFAK 141
WER +E K + + K++AGD N+ RE++ F++ W + K
Sbjct: 90 WERMMLEVEKSPEPLAILKKYAGDGNISRESVVGTLTRFKQMQAWKI----------IIK 139
Query: 142 NVEWHPEKRWRS--EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKG 199
EW E+ W + + + VL+ + ++ F R+ + E L++ +G
Sbjct: 140 FTEWLMEQGWYNFNQKDYFLVLLAYCKDGQVDKTEGIFQRMAELGVVANIEMYTLQI-EG 198
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
G + S+ +A +V + ++ Y ++ +AGR + RIF L+ + +
Sbjct: 199 YGRRRSFDKAEAVFQRLLTTGPSPTAQT---YQTMMKSYSEAGRLDDVQRIFKLVTDSPS 255
Query: 260 --LYPDIAAYHSVAVTLGQVGLLKELVKLIERMR-----------------QKPSKRIKN 300
+ PD Y+ + T G+ G +++ + + + M+ QK K ++
Sbjct: 256 PTVKPDARMYNLMIHTYGKQGKVEQAMSVYQSMKRERVALTIVTFNSLLACQKTWKDAED 315
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+ RK L+PD+ Y A++NA + + + F + +G++P+ Y + +Y
Sbjct: 316 VFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYA 375
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
+C EG A A ++ M+Q G T Y L + A V
Sbjct: 376 KCKDP--------EG----ARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVL 423
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRN 479
++K L+ TF L+ +G +D+ + F+ MK EPN ++ Y N
Sbjct: 424 RMKEADLQPNLQ-TFCVLMTGYANGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNAYGSN 482
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
D F A +++ +GY KPD + +L+ + + Q E
Sbjct: 483 DDFDSAIIWYKQML---GTGY----------KPDPILRTVLLKIAKSHEQTE 521
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 99/257 (38%), Gaps = 25/257 (9%)
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+++ A+ ++G++++ + M + GVV +Y + A V +++ +
Sbjct: 159 LVLLAYCKDGQVDKTEGIFQRMAELGVVANIEMYTLQIEGYGRRRSFDKAEAVFQRLLTT 218
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT----VNAMLKVYSRNDM 481
S P T+ ++ S + G +DD IF+ + D P + N M+ Y +
Sbjct: 219 GPS-PTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTYGKQGK 277
Query: 482 FSKAKELFEETTRA---------NS----------SGYTFLSGDGAPLKPDEYTYSSMLE 522
+A +++ R NS + F A L PD ++Y++++
Sbjct: 278 VEQAMSVYQSMKRERVALTIVTFNSLLACQKTWKDAEDVFRKLQAAKLDPDVFSYTALVN 337
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
A A A + E + M +G + Q + L+ ++ + + G P
Sbjct: 338 AYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGARAVLKQMKQNGCTP 397
Query: 583 HPLFFTEMLIQAIVQSN 599
+T LI A V N
Sbjct: 398 TVESYTS-LISAYVSVN 413
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 84/213 (39%), Gaps = 31/213 (14%)
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA---VAAVRNMEQRGV 392
VF++L +G P+A TY M+SY E G++++ V + V
Sbjct: 211 VFQRLLTTGPSPTAQTYQTMMKSYS------------EAGRLDDVQRIFKLVTDSPSPTV 258
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 452
A +Y + G+ + AM V + +K R + + +TF L+ +D
Sbjct: 259 KPDARMYNLMIHTYGKQGKVEQAMSVYQSMKRERVALTI-VTFNSLLACQKTWKDAEDVF 317
Query: 453 SIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
Q K +P++ + A++ Y++ RA + F A ++P
Sbjct: 318 RKLQAAK--LDPDVFSYTALVNAYAK-------------ARRAECAHAAFDDMIAAGIRP 362
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+ Y++++ A A E V K M +GC
Sbjct: 363 TQVAYNALINAYAKCKDPEGARAVLKQMKQNGC 395
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/425 (19%), Positives = 163/425 (38%), Gaps = 64/425 (15%)
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
K + +A +L+W++ D+ F Y L+ L K G +AL++F+ M E + P
Sbjct: 162 KKQFDKAKELLNWMWEQGFSPDV---FSYGTLINSLAKNGYMSDALKLFDEMPER-GVTP 217
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN-----------WDPVLE 311
D+A Y+ + + G + ++ ER+ + PS N+ N +D E
Sbjct: 218 DVACYNILIDGFFKKGDILNASEIWERLLKGPSVY-PNIPSYNVMINGLCKCGKFDESFE 276
Query: 312 -----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
DL Y+ +++ S G V+K++ ++G+ P Y + Y
Sbjct: 277 IWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYL 336
Query: 361 R------CL----------------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
R CL +L+R +E K++EA++ + ++ +
Sbjct: 337 RAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMT 396
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
Y L LC NG A+ ++E+ ++ R ++ +I G +D+ + M
Sbjct: 397 YGVLVHGLCKNGYLNKALSILEEAENGRGDLD-TFAYSSMINGLCREGRLDEVAGVLDQM 455
Query: 459 KDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
H C+PN NA++ + R A F P TY
Sbjct: 456 TKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCF-------------PTVVTY 502
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
++++ + A ++ + K M G + + ++ L+ + K + + + LE
Sbjct: 503 NTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALE 562
Query: 578 AGEIP 582
G P
Sbjct: 563 KGFKP 567
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 135/355 (38%), Gaps = 49/355 (13%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+++ +L PH AL IF+ + +H + L L+ + +++E +R
Sbjct: 12 RVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRT 71
Query: 293 KPSK-------RIKNMHRKNWDP--------------VLEPDLVVYNAVLNACVPSHQWK 331
+ K + + KN P +P + YN++LNA + S++W
Sbjct: 72 QKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWD 131
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
F GL P+ TY +L++ + + ++A + M ++G
Sbjct: 132 EAESFFLYFETMGLSPNLQTY------------NILIKISCRKKQFDKAKELLNWMWEQG 179
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
Y L L NG DA+ + +++ R P + LI G I +
Sbjct: 180 FSPDVFSYGTLINSLAKNGYMSDALKLFDEMPE-RGVTPDVACYNILIDGFFKKGDILNA 238
Query: 452 ISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
I++ + PNI + N M+ + F ++ E++ + N G
Sbjct: 239 SEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKK-NERG---------- 287
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
D YTYS+++ + + VYK MA +G D + +L RAG+
Sbjct: 288 --QDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 340
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/318 (18%), Positives = 129/318 (40%), Gaps = 27/318 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+V YN++++ + + V + ++R G +P TY LV F
Sbjct: 227 PDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTY------------NALVNCF 274
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ G++ A + M++ GV+ + C NG ++AM + +++ ++ KP
Sbjct: 275 CKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMR-MKGMKPN 333
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKELFE 490
E+T+T L+ + G +DD + + M P N+ T ++ + ++A+++F
Sbjct: 334 EVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFR 393
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
RA ++ +E Y++++ E + M G +LD +
Sbjct: 394 LMERAG-------------IRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVS 440
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ L+ K + + + E G P+ + +T ++ +A+AL+ M
Sbjct: 441 LYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKM 500
Query: 611 AYAPFHITERQWTELFES 628
+ F + L +
Sbjct: 501 MDSGFRPNIVTYCALVDG 518
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 82/406 (20%), Positives = 161/406 (39%), Gaps = 54/406 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + ++ L K G EA R ++ PD+ Y+S+ G+ G L+E+ KL+
Sbjct: 195 FTFNIMIDFLCKEGDLAEA-RALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVG 253
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR + PD+V YNA++N + + + F ++++ G+ +
Sbjct: 254 EMRGCGCR---------------PDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMAN 298
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
T+ V AF + G + EA+ M +G+ Y L C
Sbjct: 299 VVTF------------STFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCK 346
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
GR DA+++ ++ ++ PL +T+T L+ G + + +F+ M + N
Sbjct: 347 AGRLDDALVLTNEM--VQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANE 404
Query: 467 GTVNAMLK---VYSRND-MFSKAKELFEETTRANSSGYTFL------------------S 504
++ VY ++ S E+ ++ + S Y L
Sbjct: 405 LLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNK 464
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
D LKP+ Y+++++A A + + + M SG + + + L+ +AG
Sbjct: 465 MDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGS 524
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
F+ +++ G P+ +T ++ +KAV L++ M
Sbjct: 525 IDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEM 570
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 89/459 (19%), Positives = 166/459 (36%), Gaps = 86/459 (18%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQV----GLLK 281
SR + ++LLA PH A + +L+ L P +A SV TL + GLL
Sbjct: 89 SRSLLSRLLA---PGHHPHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADRGLLD 145
Query: 282 ELVKLIERMRQ---KPSKRIKN-----MHRKN--------WDPVLEPDLVVYNAVLNACV 325
+ V + R+R+ P+ R N + R+ ++ + P++ +N +++
Sbjct: 146 DAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPAPNVFTFNIMIDFLC 205
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
+ +++ G P TY ++ Y +C G++ E V
Sbjct: 206 KEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKC------------GELEEVEKLVG 253
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M G Y L C C GR + A
Sbjct: 254 EMRGCGCRPDVVTYNALVNCFCKFGRMERA------------------------------ 283
Query: 446 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
S F MK + N+ T + + + +N M +A +LF +
Sbjct: 284 ------YSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKG-------- 329
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+KP+E TY+ +++ + A + + + M G L+ + L+ + GK
Sbjct: 330 -----MKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGK 384
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 624
E F + AG + L +T ++ V N E+A++L++ M + +
Sbjct: 385 VAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGA 444
Query: 625 LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA 663
L + D+ + LLN + C + + +N+ A
Sbjct: 445 LIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDA 483
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 86/474 (18%), Positives = 173/474 (36%), Gaps = 72/474 (15%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
R + LV+ + + + + M + G+M + G R+AM
Sbjct: 260 CRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAM 319
Query: 211 SVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
+ + G+K + YT L+ KAGR +AL + N M++ + ++ Y
Sbjct: 320 KLFAQMRMKGMK-----PNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQ-GVPLNVVTYT 373
Query: 269 SVAVTL---GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
+ L G+V +++ +L+ER + ++ ++Y +++
Sbjct: 374 VLVDGLCKEGKVAEAEDVFRLMERAGIRANE------------------LLYTTLIHGHF 415
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
+ + +++ G++ + YG L+ K++EA + +
Sbjct: 416 VYKNSERALSLLSEMKDKGMELDVSLYG------------ALIWGLCNLQKLDEAKSLLN 463
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M++ G+ +Y + + +A+ +++K+ +P +T+ L+
Sbjct: 464 KMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMD-SGFRPNIVTYCALVDGLCKA 522
Query: 446 GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G ID+ IS F M D EPN+ A++ +N KA L +E S
Sbjct: 523 GSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMS------ 576
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD---QTKHAWLLVEASR 561
D +S+++ + + M SG QLD T W
Sbjct: 577 -------LDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVW------- 622
Query: 562 AGKCHL-----LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
G C+L ++E G P + + ++ + N E+A L N M
Sbjct: 623 -GFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675
>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
Length = 466
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/383 (18%), Positives = 148/383 (38%), Gaps = 66/383 (17%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ Y ++ + G + + + L+ M KP+ V YNA L
Sbjct: 75 PDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNT------------------VCYNAAL 116
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL----------------- 364
+ +W+ + + ++ + G P+ AT+ + + S + L
Sbjct: 117 KGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCE 176
Query: 365 ------KVLVRAFWEEGKINEAVAAVRNMEQR-GVVGTASVYYELACCLCNNGRWQDAML 417
+++ + E G++++A+ + +M + +G +V C RW DA
Sbjct: 177 PDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKG----FCRAERWHDASE 232
Query: 418 VVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 475
++ ++ R PL E+TF LI G ++ +F+ M + C P+I T +++L
Sbjct: 233 LIAQM--FRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNG 290
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
+S + A +LF P KPD ++Y+++L+ A +WE
Sbjct: 291 FSEQGLVEVAIQLFRSM----------------PCKPDIFSYNAVLKGLCRAARWEDAGE 334
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
+ M C ++ L+ + G + + G P + ++
Sbjct: 335 LIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFS 394
Query: 596 VQSNYEKAVALINAMAYAPFHIT 618
Q + A+ L++ M+ P I+
Sbjct: 395 EQGRLDDALKLLSTMSCKPDAIS 417
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 141/337 (41%), Gaps = 56/337 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ L + GR +ALR+ N M+ PD +++V LK + ER
Sbjct: 182 YNIIINSLSERGRVDDALRLLNSMV----CKPDALGFNAV---------LKGFCR-AERW 227
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
S+ I M R + P++E + +N +++ + VF+Q+ + P
Sbjct: 228 HDA-SELIAQMFRDDC-PLIE---MTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIV 282
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY L+ F E+G + A+ R+M + + + Y + LC
Sbjct: 283 TY------------SSLLNGFSEQGLVEVAIQLFRSMPCKPDIFS---YNAVLKGLCRAA 327
Query: 411 RWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 468
RW+DA L+ E + + P E+TF LI S G +D I + + M ++ P+I T
Sbjct: 328 RWEDAGELIAEMVG--KDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFT 385
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
NA++ +S A +L + KPD +Y+S L+ A
Sbjct: 386 YNALINGFSEQGRLDDALKLLSTMS----------------CKPDAISYNSTLKGLCRAE 429
Query: 529 QWEYFEYVYKGMALSGCQLDQT--KHAWLLVEASRAG 563
+W+ E + M + C ++ K+A L+ +RAG
Sbjct: 430 RWQDAEELVAEMLRNKCTPNEVTFKYANHLLMPNRAG 466
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/329 (18%), Positives = 119/329 (36%), Gaps = 48/329 (14%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR---------- 361
PD YN VL + +W+ + ++ ++ P+ T+ + S+ +
Sbjct: 5 PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQL 64
Query: 362 -------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-CLC 407
+ L+ F E+G +++A+ + M + +V Y A LC
Sbjct: 65 LDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM----LCKPNTVCYNAALKGLC 120
Query: 408 NNGRWQD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 465
RW+D L+ E ++ + P E TF+ LI S +D + + + M+ + CEP+
Sbjct: 121 IAERWEDIGELMAEMVR--KGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPD 178
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
N ++ S A L KPD ++++L+
Sbjct: 179 TVNYNIIINSLSERGRVDDALRLLNSMV----------------CKPDALGFNAVLKGFC 222
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
A +W + M C L + L+ + G + F+ + P +
Sbjct: 223 RAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIV 282
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMAYAP 614
++ +L Q E A+ L +M P
Sbjct: 283 TYSSLLNGFSEQGLVEVAIQLFRSMPCKP 311
>gi|242094080|ref|XP_002437530.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
gi|241915753|gb|EER88897.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
Length = 540
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 141/346 (40%), Gaps = 41/346 (11%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+ VYN +LN + + V ++ +R G++P+ TYG +++Y C+++
Sbjct: 182 PDVRVYNILLNGWSRARRLDKVEKLWAAMRDEGVRPTVVTYGTFIDAY--CVMR------ 233
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ ++A+ + M + G+ + L GR+ DA V+EK L P
Sbjct: 234 ----RPDQAMTLLDQMREEGIQANLLTCNPIVYALAQAGRFGDAHKVLEKF-PLYGVSPN 288
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
TF L+ G + + + M P T N V+SRN L+
Sbjct: 289 ISTFNSLVFGYCKHGDLAGASGVLKAMLGRGISPTARTYNYFFMVFSRNRSIELGMNLYV 348
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ S+GY PD++TY +++ A++ E + + M +G + DQ
Sbjct: 349 KMV---SNGYA----------PDQFTYHLLIKMLCEANRLELTLQMLQEMRNNGFEPDQA 395
Query: 551 KHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV-AL 606
L+ R H E A F+ + E G +P + + ML++ + + K V L
Sbjct: 396 TSTMLIHLLCRR---HHFEEAFAEFEQMFERGIVPQYITY-RMLMKELKRLGLVKLVQKL 451
Query: 607 INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAAS 652
+ M P T+L S D+ D +EK + L A S
Sbjct: 452 ADLMRSVP------HSTKLPGSYRDKEGDDAIEKKKSILLKAQAVS 491
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 151/373 (40%), Gaps = 41/373 (10%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ G+ G +++++ + +K S + LL+IL K GR A +F+ M
Sbjct: 144 LIRSYGNAGLFQESVKLFQ---TMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD ++++ + ++ E ++ + M ++ N PD+V
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDME---------LYHCN------PDVV 245
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRK--SGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
YN +++ + + K V + K + + P+ +Y LVR +
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSY------------TTLVRGYCM 293
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLE 432
+ +I+EAV +M RG+ A Y L L R+ + +++ + P
Sbjct: 294 KQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDA 353
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
TF LI + D GH+D + +FQ M + P+ + + +++ + F +A+ LF E
Sbjct: 354 CTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNE 413
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
L D KP Y+ M E + + E V++ + G Q D
Sbjct: 414 LFEKE----VLLGKDEC--KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPS 466
Query: 552 HAWLLVEASRAGK 564
+ L+ R GK
Sbjct: 467 YKTLITGHCREGK 479
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
F LI S + G + + +FQ MK P++ T N++L + + A +LF+E
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
R + G T PD YT+++++ + ++K M L C D +
Sbjct: 201 R--TYGVT----------PDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYN 248
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHP--LFFTEMLIQAIVQSNYEKAVALINAM 610
++ RAGK + + +L+ HP + +T ++ ++ ++AV + + M
Sbjct: 249 TIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDM 307
>gi|357436523|ref|XP_003588537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477585|gb|AES58788.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 653
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/389 (19%), Positives = 161/389 (41%), Gaps = 46/389 (11%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
TKLL IL G+P A IF ++E+ + P + Y S+ L K + L+ ++
Sbjct: 78 TKLLNILIVCGKPQAANVIFKKLIEEGH-QPSLITYTSLLHALTMQKCFKSIHSLVSQVE 136
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+K ++ + + YNAV+NA S + +++++SG +PS T
Sbjct: 137 EKQ---------------MKTNSIFYNAVINAFAESGNMEDAKKTVQKMKESGFRPSTGT 181
Query: 352 YGLAMESYRRC------------------------LLKVLVRAFWEEGKINEAVAAVRNM 387
Y ++ Y +L++A + G ++EA V M
Sbjct: 182 YSNLIKGYGIVGKSGEAMKLLDLMLTDGNSKPDLQTYNMLIKALCQSGNMSEAWNIVCKM 241
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
G++ + + +A N +A ++ +++ + +P E TFT ++ G
Sbjct: 242 PASGMLPDSVTFNTMAIGYVLNSETAEAEAMILEMQR-KGLEPNERTFTVIVNGYYKEGQ 300
Query: 448 IDDCISIFQHMKD-HCEPNIGTVNAMLKVY----SRNDMFSKAKELFEETTRANSSGYTF 502
I + + +KD +PN+ N ++ + R+ + + +E ++
Sbjct: 301 IKEALQFVYRIKDLGFKPNLLVFNVLINGFVDRMDRDGVDEFSNTFAQEGKNQVTTPLVL 360
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
++PD TYS+++ A + A + + ++ M SG + D ++ L+ R+
Sbjct: 361 RLMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQIFDNMLQSGVKPDVHAYSILVKGYVRS 420
Query: 563 GKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ E ++E+G P+ + FT ++
Sbjct: 421 METEKAEELLGDMIESGVRPNVVTFTNVI 449
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 131/309 (42%), Gaps = 49/309 (15%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S Y+ L+ G G+ EA+++ +LML D N PD+ Y+ + L Q G + E +
Sbjct: 178 STGTYSNLIKGYGIVGKSGEAMKLLDLMLTDGNSKPDLQTYNMLIKALCQSGNMSEAWNI 237
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +M P+ + PD V +N + V + + + ++++ GL+
Sbjct: 238 VCKM---PASG------------MLPDSVTFNTMAIGYVLNSETAEAEAMILEMQRKGLE 282
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY------ 400
P+ T+ V+V +++EG+I EA+ V ++ G V+
Sbjct: 283 PNERTF------------TVIVNGYYKEGQIKEALQFVYRIKDLGFKPNLLVFNVLINGF 330
Query: 401 ----------ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
E + G+ Q +V ++ +P +T++ ++ + G D
Sbjct: 331 VDRMDRDGVDEFSNTFAQEGKNQVTTPLVLRLMKEFQIQPDVVTYSTIMNAWSQAGFQDK 390
Query: 451 CISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF----EETTRANSSGYT-FLS 504
C IF +M + +P++ + ++K Y R+ KA+EL E R N +T +S
Sbjct: 391 CKQIFDNMLQSGVKPDVHAYSILVKGYVRSMETEKAEELLGDMIESGVRPNVVTFTNVIS 450
Query: 505 GDGAPLKPD 513
G G+ + D
Sbjct: 451 GWGSSGRMD 459
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/448 (19%), Positives = 169/448 (37%), Gaps = 67/448 (14%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY-PDIAAYHSVAVTLGQVGLLKELVK 285
+RF LL++ KA R +A F ++ N++ PD +Y+++ + G +K+ +
Sbjct: 101 NRFTCNNLLSVYVKARRVEDAHLFFQSHMK--NVFEPDEVSYNTLMNGFFKAGDVKKALA 158
Query: 286 LIERMRQKPSKRIKNMH------------------RKNWDPVLEPDLVVYNAVLNACVPS 327
L M+ +++ + K+ + P+L+ Y +++ S
Sbjct: 159 LFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKS 218
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ +FKQ+ + P TYG L+ ++ ++ EA
Sbjct: 219 RKVDKAITLFKQMVDKAIYPDVVTYG------------ALIDGLGKQRRVKEAYDLFEEA 266
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+G T Y + LC GR ++A+ + + + H KP T++ LI
Sbjct: 267 RAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNR 326
Query: 448 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS-----GYT 501
+ +++ M D C P++ T N +L ++ KA E+F + N YT
Sbjct: 327 GEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYT 386
Query: 502 FLS---------GD---------GAPLKPDEYTYSSMLEA----SATAHQWEYFEYVYKG 539
L GD G L PD T++++++ S E FE + K
Sbjct: 387 VLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGK- 445
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
C+ D +L + + + D +L++G P +T ++
Sbjct: 446 ----TCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGR 501
Query: 600 YEKAVALINAMAYAPFHITERQWTELFE 627
Y A+ + + M F ER EL +
Sbjct: 502 YSDALIMYHEMIEMGFP-PERHLAELVD 528
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/432 (19%), Positives = 166/432 (38%), Gaps = 64/432 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K K + +A +L+W++ D+ F Y L+ L K G +AL++F+ M
Sbjct: 155 LIKISCRKKQFDKAKELLNWMWEQGFSPDV---FSYGTLINSLAKNGYMSDALKLFDEMP 211
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN---------- 305
E + PD+A Y+ + + G + ++ ER+ + PS N+ N
Sbjct: 212 ER-GVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS-VYPNIPSYNVMINGLCKCG 269
Query: 306 -WDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+D E DL Y+ +++ S G V+K++ ++G+ P Y
Sbjct: 270 KFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYN 329
Query: 354 LAMESYRR------CL----------------LKVLVRAFWEEGKINEAVAAVRNMEQRG 391
+ Y R CL +L+R +E K++EA++ + ++
Sbjct: 330 TMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKD 389
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
+ Y L LC NG A+ ++E+ ++ R ++ +I G +D+
Sbjct: 390 CCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD-TFAYSSMINGLCREGRLDEV 448
Query: 452 ISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 510
+ M H C+PN NA++ + R A F
Sbjct: 449 AGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCF------------ 496
Query: 511 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 570
P TY++++ + A ++ + K M G + + ++ L+ + K + +
Sbjct: 497 -PTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALN 555
Query: 571 AFDSLLEAGEIP 582
+ LE G P
Sbjct: 556 LWCQALEKGFKP 567
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 137/355 (38%), Gaps = 49/355 (13%)
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
+++ +L PH AL IF+ + +H + L L+ + +++E +R
Sbjct: 12 RVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRT 71
Query: 293 KPSK-------RIKNMHRKNWDP--------------VLEPDLVVYNAVLNACVPSHQWK 331
+ K + + KN P +P + YN++LNA + S++W
Sbjct: 72 QKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWD 131
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
F GL P+ TY + L+K+ R + + ++A + M ++G
Sbjct: 132 EAESFFLYFETMGLSPNLQTYNI--------LIKISCR----KKQFDKAKELLNWMWEQG 179
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
Y L L NG DA+ + +++ R P + LI G I +
Sbjct: 180 FSPDVFSYGTLINSLAKNGYMSDALKLFDEMPE-RGVTPDVACYNILIDGFFKKGDILNA 238
Query: 452 ISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
I++ + PNI + N M+ + F ++ E++ + N G
Sbjct: 239 SEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKK-NERG---------- 287
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
D YTYS+++ + + VYK MA +G D + +L RAG+
Sbjct: 288 --QDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 340
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 99/471 (21%), Positives = 183/471 (38%), Gaps = 79/471 (16%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+KD D S Y+ L+ L GR EA+ + M++ + P + Y V+L G
Sbjct: 264 VKDGCDPNS-VTYSTLINGLCSEGRLEEAMDMLEEMVQK-GIEPTVYTYTIPLVSLCDAG 321
Query: 279 LLKELVKLIERMR--------QKPSKRIKNMHR------------KNWDPVLEPDLVVYN 318
E V+L+ +M+ Q + I + R K L P V YN
Sbjct: 322 CSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYN 381
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL-------------- 364
A++N +++ F +FK + G PS TY ++ + CL+
Sbjct: 382 ALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCF--CLMGDIQKAMVIFDKML 439
Query: 365 -----------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
L+ + ++G +N A+ + M+ G+ A Y EL G+ +
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLE 499
Query: 414 DAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNA 471
A + + + H P +T+T +I + +DD +++F M + P+ T N
Sbjct: 500 HATSLFYGM--MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557
Query: 472 MLKVYSRNDMFSKAK----ELFEETTRANSSGYT-FLSG------DGAPLK--------- 511
M+ +S+ + S+A+ ++ ++ N YT F+ G G K
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617
Query: 512 --PDEYTYSSMLEA---SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
P+ YTYSS++ A E + + + + GC+ + + L+ G+C+
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAEMYNLLAR-LTHYGCEPNVDTYTTLVKGLCGEGRCY 676
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHI 617
+ S+ + G P + +LI E A+ + +M F +
Sbjct: 677 EADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQL 727
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 160/416 (38%), Gaps = 84/416 (20%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T LL LGK A ++ ML + P + ++++ L + G ++E KLI
Sbjct: 170 FTTLLIQLGKFDMVDLARDMYIKMLNS-GIRPSLLTFNTMINILCKKGRVQE-AKLIMS- 226
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
H +D P+ Y +++ +H F +F ++ K G P++
Sbjct: 227 -----------HIFRYDAY--PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSV 273
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY L+ EG++ EA+ + M Q+G+ T Y LC+ G
Sbjct: 274 TY------------STLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAG 321
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIIS-SMDG------------------------ 445
+A+ ++ K+K R P TFT LI S DG
Sbjct: 322 CSSEAVELLGKMKK-RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTY 380
Query: 446 ----------GHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
G + +IF+ M H P+ T N ++K + KA +F++ +
Sbjct: 381 NALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLK 440
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
A SS P+ TY++++ + + M +G + D +
Sbjct: 441 AGSS-------------PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487
Query: 555 LLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 607
L+ SR GK LEHA F ++E G P+ + +T ++ + + A+AL
Sbjct: 488 LISGFSRGGK---LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALF 540
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 120/308 (38%), Gaps = 50/308 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +G+ AM +L+ + G K D + YT+L++ + G+ A +F M+
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPD---AWTYTELISGFSRGGKLEHATSLFYGMM 509
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNWDPV--- 309
E + P+ Y ++ + + + + L +M + PS + N+ +
Sbjct: 510 EH-GISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568
Query: 310 --------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP-----SAA 350
L P+++ Y + ++ + + F +F ++ K P S+
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Query: 351 TYGLAME---------------SYRRC-----LLKVLVRAFWEEGKINEAVAAVRNMEQR 390
YGL E ++ C LV+ EG+ EA V +M+++
Sbjct: 629 IYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKK 688
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
G+ + +Y L C N + + A+ + + +L L + LI + I++
Sbjct: 689 GLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLS-DYKALICALCKENFIEE 747
Query: 451 CISIFQHM 458
IFQ M
Sbjct: 748 AQCIFQTM 755
>gi|297805706|ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316573|gb|EFH46996.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 680
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 169/399 (42%), Gaps = 65/399 (16%)
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
L + W++++++LDWV+ ++ + S F Y +L + +A + A +F+ M +
Sbjct: 131 LSRENDWQRSLALLDWVH--EEAKYTPSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRA- 187
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP---------------------SKRI 298
L PD Y ++ + G+ G+ + +++M Q SK I
Sbjct: 188 LAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAI 247
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
R + PDLV YN+++N + +K + K++ ++G+ P+ +Y
Sbjct: 248 SIFSRLKRSGI-TPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYS----- 301
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
L+ + E K EA++ M++ + +L C + +V
Sbjct: 302 -------TLLSVYVENHKFLEALSVFAEMKE------VNCPLDLTTCNIMIDVYGQLDMV 348
Query: 419 VEKIK---SLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAM 472
E + SLR +P +++ ++ + + I +F+ M + E N+ T N M
Sbjct: 349 KEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTM 408
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
+K+Y + KA L +E S G ++P+ TYS+++ A + +
Sbjct: 409 IKIYGKTMEHEKATNLVQEM---QSRG----------IEPNAITYSTIISIWGKAGKLDR 455
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
+++ + SG ++DQ + ++V R G L+ HA
Sbjct: 456 AATLFQKLRSSGVEIDQVLYQTMIVAYERVG---LMGHA 491
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/400 (19%), Positives = 161/400 (40%), Gaps = 50/400 (12%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
++ MN++G+ LL + + +A+SV + + DL + + ++
Sbjct: 284 LIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNI---MID 340
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
+ G+ EA R+F L ++ P++ +Y+++ G+ L E + L M++K
Sbjct: 341 VYGQLDMVKEADRLF-WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD-- 397
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+E ++V YN ++ + + + + ++++ G++P+A TY
Sbjct: 398 -------------IEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYS--- 441
Query: 357 ESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
++ + + GK++ A + + GV +Y + G A
Sbjct: 442 ---------TIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAK 492
Query: 417 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKV 475
++ ++K L + P E T L G ++ +F+ + E +I M+ +
Sbjct: 493 RLLHELK-LPDNIPRETAITIL----AKAGSTEEATWVFRQAFESGEVKDISVFGCMINL 547
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
YSRN + E+FE + ++GY PD + +L A ++E +
Sbjct: 548 YSRNQRYVNVIEVFE---KMRTAGYF----------PDSNAIAMVLNAYGKQREFEKADT 594
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
VY+ M GC H +L S ++E F+ L
Sbjct: 595 VYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFERL 634
>gi|414888270|tpg|DAA64284.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 890
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 128/354 (36%), Gaps = 81/354 (22%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G+ GR ++F M + PD A Y+ + G G KE+V+L
Sbjct: 380 TYRVLLDLYGRQGRFDGVRQLFREM--RTAVPPDTATYNVLFRVFGDGGFFKEVVELFHD 437
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + ++PD+V V+ AC V + + + G+ P+A
Sbjct: 438 MLKTG---------------VQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTA 482
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
Y LV A EA A M + G + T Y LA
Sbjct: 483 DAY------------TGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARG 530
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD--------- 460
G +Q+A + ++ + + + +F LI + G +DD + + M+
Sbjct: 531 GLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERS 590
Query: 461 -------HC--------------------EPNIGTVNAMLKVYSRNDMFSKAKELFEE-- 491
+C P++ ML +Y+RND ++ A +L EE
Sbjct: 591 LEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARNDRWTDAYDLLEEMK 650
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
T RA+S+ A L EY SS W+ EYV + + GC
Sbjct: 651 TNRASSTHQVI-----ASLIKGEYDDSS---------NWQMVEYVLENSTMEGC 690
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 111/310 (35%), Gaps = 37/310 (11%)
Query: 310 LEPDLVVYNAVLNAC-------VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
+ P YN VL AC VP G+F + ++P + +Y
Sbjct: 227 VAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDASPSVRPD-------LTTYNTL 279
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
L VR+ ++ ++ + M + GV Y + + G A + ++
Sbjct: 280 LAAAAVRSLADQSEM-----LLHTMLEAGVSPDTVSYRHIVDAFASAGNLSRAAELFSEM 334
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDM 481
+ H+ + GL+ + G D +++ + M+ D C P T +L +Y R
Sbjct: 335 AATGHTADAS-AYLGLMEAHTRVGATADAVAVLRQMQADGCAPTAATYRVLLDLYGRQGR 393
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
F ++LF E A + PD TY+ + ++ ++ M
Sbjct: 394 FDGVRQLFREMRTA--------------VPPDTATYNVLFRVFGDGGFFKEVVELFHDML 439
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-Y 600
+G Q D ++ G + + G +P +T L++A+ + Y
Sbjct: 440 KTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTG-LVEALGHAAMY 498
Query: 601 EKAVALINAM 610
E+A N M
Sbjct: 499 EEAYVAFNMM 508
>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/415 (19%), Positives = 161/415 (38%), Gaps = 65/415 (15%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
K +K GD+G R A + W + K + F Y +L + KA R A +F+ +
Sbjct: 187 KFVKAYGDRGDIRGA---IHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQI 243
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+++ + PD++ Y ++ ++G+++ + + M K P+L
Sbjct: 244 VKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEMGCK------------------PNL 285
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKS-GLKPSAATYGLAMESY-------------- 359
V YN ++N + + Q+ ++ P TY ++ Y
Sbjct: 286 VTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYME 345
Query: 360 ----RRCLLKVL-----VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
R C VL + G ++EA + M G+ + + + LC G
Sbjct: 346 EMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVG 405
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISS-MDGGHIDDCISIFQHMKDH-CEPNIGT 468
+ DA ++++ L + G++++ G DD IS+ + MK P++ +
Sbjct: 406 KLDDAARHLKEMVGL--GMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSS 463
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA--SAT 526
NA+ ++ + KA + + + + P+ +YS++++ A
Sbjct: 464 FNAVFRILVESGKTDKAGLILRQMKQLGCT-------------PNFLSYSTVIDGLCKAK 510
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
E E+V M +G LD + ++WL+ G + F +L+ G +
Sbjct: 511 GRMHEVEEFV-DDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYV 564
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 144/358 (40%), Gaps = 46/358 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + LL +A R EAL I + PD+ +Y+ LLK L
Sbjct: 113 IIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNI---------LLKSLCN--- 160
Query: 289 RMRQKPSKRIKNMHR--KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
Q S + N+ R V PD+V YN V++ +FK++ + G+
Sbjct: 161 ---QGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP 217
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P TY +V A + +++A A +R M + V+ Y L
Sbjct: 218 PDLVTY------------NSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGY 265
Query: 407 CNNGRWQDAMLVVEKIKSLRHSK-PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-P 464
+ G+W++A+ V ++++ RHS P +T + L+ S G I + +F M + P
Sbjct: 266 SSTGQWKEAVRVFKEMR--RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 323
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
++ + N ML Y+ +LF+ + GDG + PD YT++ ++A
Sbjct: 324 DVFSYNIMLNGYATKGCLVDMTDLFD-----------LMLGDG--IAPDFYTFNVQIKAY 370
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
A + ++ M G + D + ++ R GK F+ +++ G P
Sbjct: 371 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 428
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 77/198 (38%), Gaps = 28/198 (14%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+ +KR L + + Y L+ G+ EA+R+F M ++ PD+ + +L + G
Sbjct: 246 MVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRH-SILPDVVTLSMLMGSLCKYG 304
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+KE + + M K PD+ YN +LN + +F
Sbjct: 305 KIKEARDVFDTMAMKGQ---------------NPDVFSYNIMLNGYATKGCLVDMTDLFD 349
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
+ G+ P T+ + +++Y C G +++A+ M GV
Sbjct: 350 LMLGDGIAPDFYTFNVQIKAYANC------------GMLDKAMIIFNEMRDHGVKPDVVT 397
Query: 399 YYELACCLCNNGRWQDAM 416
Y + LC G+ DAM
Sbjct: 398 YRTVIAALCRIGKMDDAM 415
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/286 (19%), Positives = 109/286 (38%), Gaps = 28/286 (9%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLV 368
VL P Y +++ C +H+ + F QL ++GL+ A + L+
Sbjct: 72 VLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAI------------IASHLL 119
Query: 369 RAFWEEGKINEAV-AAVRNMEQRGVVGTASVYYELACCLCNNGR-WQDAMLVVEKIKSLR 426
+ F E + +EA+ + + G V Y L LCN G+ Q L+ +
Sbjct: 120 KGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGT 179
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
P + + +I G ++ +F+ M + P++ T N+++ + KA
Sbjct: 180 VCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKA 239
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+ + + P+ +TY++++ ++ QW+ V+K M
Sbjct: 240 EAFLRQMVNKR-------------VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 286
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
D + L+ + GK FD++ G+ P + ML
Sbjct: 287 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 332
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 119/327 (36%), Gaps = 46/327 (14%)
Query: 93 FRQLASESKEFAGDNLKRENLRELKEMFEKDL---NWVLDD-----DVQLGSDYFAKNVE 144
+ L ++ K DNL R + E + D+ N V+D DV D F + V+
Sbjct: 155 LKSLCNQGKSGQADNLLRM-MAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 213
Query: 145 WHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKG 204
+ + +V L + K F+R M ++ L+ G G
Sbjct: 214 ----RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 269
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPD 263
W++A+ V ++ L + L+ L K G+ EA +F+ M ++ N PD
Sbjct: 270 QWKEAVRVFKE---MRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN--PD 324
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ +Y+ + G L ++ L + M + PD +N + A
Sbjct: 325 VFSYNIMLNGYATKGCLVDMTDLFDLMLGDG---------------IAPDFYTFNVQIKA 369
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
+F ++R G+KP TY + ++ A GK+++A+
Sbjct: 370 YANCGMLDKAMIIFNEMRDHGVKPDVVTY------------RTVIAALCRIGKMDDAMEK 417
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNG 410
M +GV Y L C +G
Sbjct: 418 FNQMIDQGVAPDKYAYNCLIQGFCTHG 444
>gi|297826989|ref|XP_002881377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327216|gb|EFH57636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 589
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 135/314 (42%), Gaps = 41/314 (13%)
Query: 304 KNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K WD ++ +PD++ +N +++A ++K ++ QL +S P+ T
Sbjct: 146 KKWDSIILVCEWILRRSSFQPDVICFNLLIDAYGQKFRFKEAESLYVQLLESRCVPTEDT 205
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE-LACCLCNNG 410
Y L L++A+ G I +A A + M+ V + +VY + + G
Sbjct: 206 YTL------------LIKAYCMAGLIEKAEAVLIEMQNHHVSPSVTVYNAYIEGLMKRKG 253
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS--IFQHMKDH-CEPNIG 467
+ A+ V +++K R KP T+ +I ++ G +S +F M+ H C+PNI
Sbjct: 254 NTEQAIDVFQRMKRDR-CKPTTETYNLMI--NLYGKASKSYMSWKLFCEMRSHQCKPNIC 310
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTR----ANSSGYTFLSGDGAPL------KPDEYTY 517
T A++ ++R + KA+E+FE+ + +GY + + + L +PD +Y
Sbjct: 311 TYTALVNAFAREGLCEKAEEIFEQLQEDGHIDSRAGYPYGAAEIFSLMQHMGCEPDRASY 370
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+ M++A A E V++ M G H LL SRA E + E
Sbjct: 371 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSE 430
Query: 578 AGEIPHPLFFTEML 591
G P ML
Sbjct: 431 NGVEPDTFVLNSML 444
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 156/400 (39%), Gaps = 55/400 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G K +++A S+ L + R + + YT L+ AG +A + + +
Sbjct: 174 LIDAYGQKFRFKEAESLY---VQLLESRCVPTEDTYTLLIKAYCMAGLIEKAEAVL-IEM 229
Query: 256 EDCNLYPDIAAYHS-VAVTLGQVGLLKELVKLIERM---RQKPSKRIKNM---------- 301
++ ++ P + Y++ + + + G ++ + + +RM R KP+ N+
Sbjct: 230 QNHHVSPSVTVYNAYIEGLMKRKGNTEQAIDVFQRMKRDRCKPTTETYNLMINLYGKASK 289
Query: 302 HRKNWDPVLE-------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+W E P++ Y A++NA + +F+QL++ G S A Y
Sbjct: 290 SYMSWKLFCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHIDSRAGYPY 349
Query: 355 -AMESYR----------RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
A E + R ++V A+ G ++A A M++ G+ T + L
Sbjct: 350 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLL- 408
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG--GHIDDCISIFQHMKDH 461
L R +D +K + + TF + ++ G G I M++
Sbjct: 409 --LSAYSRARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENG 466
Query: 462 -CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 520
C +I T N ++ +Y + + +ELF E N KPD T++S
Sbjct: 467 PCTADISTYNILINIYGKAGFLERIEELFVELKERN-------------FKPDVVTWTSR 513
Query: 521 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
+ A + + +++ M SGC D LL S
Sbjct: 514 IGAYSRKKLYVKCLEIFEEMIDSGCAPDGGTAKVLLSACS 553
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 127/308 (41%), Gaps = 45/308 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL + G +AM+V Y +K S +Y L+ L K G +AL++ M+
Sbjct: 362 LINGLCNDGDMNRAMAVF---YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418
Query: 256 E-DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKN------MHRKN 305
E C+ PDI Y+ V L ++G L + ++ K P N ++N
Sbjct: 419 EHGCS--PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRN 476
Query: 306 WDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
D +E PD++ YN +LN + + V FK + + G P+ TY
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITY-- 534
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
+L+ +F ++ K++EA+ + M+ RG+ L C LC+NG
Sbjct: 535 ----------NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDK 584
Query: 415 A---MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVN 470
A + +EK +S + F +I + ++ +F M C P+ T
Sbjct: 585 AYELFVTIEKEYKFSYSTAI---FNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYR 641
Query: 471 AMLKVYSR 478
M+ Y +
Sbjct: 642 VMIDSYCK 649
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/356 (19%), Positives = 134/356 (37%), Gaps = 62/356 (17%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ KL+ +L K G E+ ++F+ +++ + P++ ++ L + G + E +L+E
Sbjct: 217 LTFNKLIHVLCKKGNVQESEKLFSKVMKR-GVCPNLFTFNIFIQGLCRKGAIDEAARLLE 275
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+ + L PD++ YN ++ + ++ SG++P+
Sbjct: 276 SIVSEG---------------LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPN 320
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY ++ F + G + A +R+ +G + Y L LCN
Sbjct: 321 EFTY------------NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368
Query: 409 NGRWQDAMLVVEKI--KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPN 465
+G AM V + K +HS I + L+ G + + + + M +H C P+
Sbjct: 369 DGDMNRAMAVFYEAMEKGFKHSI---ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPD 425
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEE-----------TTRANSSGY-------------- 500
I T N ++ + S A + + T GY
Sbjct: 426 IWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILD 485
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
T LS + PD TY+++L A + + +K M GC + + L+
Sbjct: 486 TMLS---HGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILI 538
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 102/518 (19%), Positives = 197/518 (38%), Gaps = 88/518 (16%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDL-KSRFVYTKLLAILGKAGRPHEALRIFNL 253
KL+ L KG+ +++ + V KR + + F + + L + G EA R+
Sbjct: 221 KLIHVLCKKGNVQESEKLFSKVM----KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLES 276
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNM--------- 301
++ + L PD+ +Y+++ + L E + +M +P++ N
Sbjct: 277 IVSE-GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAG 335
Query: 302 HRKNWDPVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY- 352
+N D +L PD Y++++N VF + + G K S Y
Sbjct: 336 MMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYN 395
Query: 353 ---------GLAMESYRRCLLK---------------VLVRAFWEEGKINEAVAAVRNME 388
GL +++ + L+K ++V + G +++A + +
Sbjct: 396 TLVKGLSKQGLVLQALQ--LMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI 453
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGH 447
+G + + L C A+ +++ + L H P IT+ L+
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTM--LSHGITPDVITYNTLLNGLCKARK 511
Query: 448 IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET-TRANSSGYTFLSG 505
+D+ + F+ M + C PNI T N +++ + ++ S+A ELF+E TR + L
Sbjct: 512 LDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCT 571
Query: 506 DGAPL-----------------KPDEYTYSS-----MLEASATAHQWEYFEYVYKGMALS 543
L K +++YS+ M+ A E ++ M S
Sbjct: 572 LICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGS 631
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE---AGEIPHPLFFTEMLIQAIVQSNY 600
C D + ++ + G L H F LLE G +P ++L V
Sbjct: 632 DCAPDNYTYRVMIDSYCKTGNID-LAHTF--LLENISKGLVPSFTTCGKVLNCLCVTHRL 688
Query: 601 EKAVALINAMAYAPFHITERQWTELFESNEDRISRDKL 638
+AV +IN M I + +FE+++ ++ K+
Sbjct: 689 SEAVVIINLMVQNG--IVPEEVNSIFEADKKEVAAPKI 724
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 62/357 (17%), Positives = 135/357 (37%), Gaps = 58/357 (16%)
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
Y + G+ G ++E V + ERM +D EP + YNA++N
Sbjct: 77 GVYIGIMRDYGRKGKVQEAVNVFERM-------------DFYD--CEPSVQSYNAIMNIL 121
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCL-------LKVL---------- 367
V + V+ +++ G+ P T+ + M+S+ C+ L++L
Sbjct: 122 VEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSF--CITGRPTAALRLLNNMPGQGCEF 179
Query: 368 --------VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
+ F++E EA M ++G+ + +L LC G Q++ +
Sbjct: 180 NAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLF 239
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 478
K+ R P TF I G ID+ + + + + P++ + N ++ + +
Sbjct: 240 SKVMK-RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCK 298
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
+ +A+ + + ++P+E+TY++++ A + + + +
Sbjct: 299 HSKLVEAECYLHKMVNSG-------------VEPNEFTYNTIINGFCKAGMMQNADKILR 345
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
G D+ ++ L+ G + F +E G H + L++ +
Sbjct: 346 DAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG-FKHSIILYNTLVKGL 401
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/375 (19%), Positives = 153/375 (40%), Gaps = 38/375 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P V +N +L + + Q+ VF + Q+ G+ P T L +L+ +F
Sbjct: 65 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYT------------LNILINSF 112
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ A + + + + G+ + + L LC G+ DA+ + +K+ +P
Sbjct: 113 CHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG-EGFQPN 171
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+T+ LI G+ + I + + M + +C+P++ +++ ++ ++A LF
Sbjct: 172 VVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFS 231
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ G + PD +TY+S++ + +W++ + M S D
Sbjct: 232 KMV-------------GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVV 278
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ ++ + GK D ++ G P+ + + ++ +QS ++AV + + M
Sbjct: 279 IFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 338
Query: 611 ---AYAPFHITERQWTELFESNEDRISR-DKLEKLLNALCNCNAASSEITVSNLSRALHA 666
YAP I+ + +I R DK L +C + +T + L +H
Sbjct: 339 VHNGYAPNVISYNTLINGYC----KIQRMDKATYLFEEMCQKELIPNTVTYNTL---MHG 391
Query: 667 LCRSEKERDLSSSAH 681
LC + +D + H
Sbjct: 392 LCHVGRLQDAIALFH 406
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 128/320 (40%), Gaps = 54/320 (16%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A SVL + L + D + + L + GK G +AL +F+ M+ + P++ Y
Sbjct: 121 AFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIG---DALHLFDKMIGE-GFQPNVVTYG 176
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L +VG ++L+ M Q +PD+VVY +++++
Sbjct: 177 TLINGLCKVGNTNAAIRLLRSMEQGNC---------------QPDVVVYTSIIDSLCKDR 221
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
Q F +F ++ G+ P TY L+ + + + M
Sbjct: 222 QVTEAFNLFSKMVGQGISPDIFTY------------TSLIHSLCNLCEWKHVTTLLNQMI 269
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG--- 445
++ ++ + LC G+ +A VV+ + +R +P +T+ L MDG
Sbjct: 270 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI-IRGVEPNVVTYNAL----MDGHCL 324
Query: 446 -GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
+D+ + +F M + PN+ + N ++ Y + KA LFEE +
Sbjct: 325 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE------- 377
Query: 504 SGDGAPLKPDEYTYSSMLEA 523
L P+ TY++++
Sbjct: 378 ------LIPNTVTYNTLMHG 391
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/408 (19%), Positives = 160/408 (39%), Gaps = 77/408 (18%)
Query: 185 GLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
GL L++GL +G A+ + D + G + ++ + Y L+ L K G
Sbjct: 132 GLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVT---YGTLINGLCKVGNT 188
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PS------ 295
+ A+R+ M E N PD+ Y S+ +L + + E L +M + P
Sbjct: 189 NAAIRLLRSM-EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTS 247
Query: 296 -----------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
K + + + + + PD+V+++ V++A + V + G
Sbjct: 248 LIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRG 307
Query: 345 LKPSAATYGLAMESYRRCL-------LKV------------------LVRAFWEEGKINE 379
++P+ TY M+ + CL +KV L+ + + ++++
Sbjct: 308 VEPNVVTYNALMDGH--CLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDK 365
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK-PLEITFTGL 438
A M Q+ ++ Y L LC+ GR QDA+ + ++ + H + P T+ L
Sbjct: 366 ATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEM--VAHGQIPDLATYRIL 423
Query: 439 IISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT---- 493
+ H+D+ +++ + ++ + +P+I ++ R A+++F +
Sbjct: 424 LDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGL 483
Query: 494 RANSSGYT------------------FLSGDGAPLKPDEYTYSSMLEA 523
R N YT F+ DG PD TY+++ +
Sbjct: 484 RPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQG 531
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 87/442 (19%), Positives = 173/442 (39%), Gaps = 54/442 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKG + +A+ +L ++ + + F Y LL L G+ +A + +M
Sbjct: 154 LLKGFCEAKRTDEALDIL--LHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA 211
Query: 256 EDCNLY-PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E + PD+ AY++V + G + + L + M Q+ + PDL
Sbjct: 212 EGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRG---------------IPPDL 256
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V Y++V++A + +Q+ G+ P TY L+ +
Sbjct: 257 VTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTY------------NNLIYGYSST 304
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
G+ EAV + M ++ ++ L LC G+ ++A V + + +++ P +
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTM-AMKGQNPDVFS 363
Query: 435 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+T ++ G + D +F M D P+I T N ++K Y+ M KA +F E
Sbjct: 364 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR 423
Query: 494 RANSSGY--TFLSGDGAPLK--------------------PDEYTYSSMLEASATAHQWE 531
+ T+++ A + PD+Y Y +++ T
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + + +G +LD ++ + G+ ++ FD + G P + + ++
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543
Query: 592 IQAIVQSNYEKAVALINAMAYA 613
+ EKA+ + +AM A
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSA 565
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 142/356 (39%), Gaps = 42/356 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ + LL +A R EAL I + PD+ +Y+ + +L G + L+
Sbjct: 149 IIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLR 208
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M + + V PD+V YN V++ +FK++ + G+ P
Sbjct: 209 MMAEGGT-------------VCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 255
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY +V A + +++A A +R M +GV+ Y L +
Sbjct: 256 LVTY------------SSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSS 303
Query: 409 NGRWQDAMLVVEKIKSLRHSK-PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNI 466
G+W++A+ V ++++ R S P + L+ S G I + +F M + P++
Sbjct: 304 TGQWKEAVRVFKEMR--RQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDV 361
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
+ ML Y+ +LF+ + GDG + PD YT++ +++A A
Sbjct: 362 FSYTIMLNGYATKGCLVDMTDLFD-----------LMLGDG--IAPDIYTFNVLIKAYAN 408
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ ++ M G + + ++ R GK F+ +++ G +P
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVP 464
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 162/411 (39%), Gaps = 75/411 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K + G +AM + + ++D Y ++A L + G+ +A+ FN M+
Sbjct: 402 LIKAYANCGMLDKAMIIFNE---MRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK-----------------RI 298
D + PD AYH + G L + +LI + + R+
Sbjct: 459 -DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517
Query: 299 ---KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+N+ + L PD VVYN +++ + + VF + +G++P+ YG
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYG-- 575
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
LV + + G+I+E ++ R M Q+G+ + +Y + +G ++
Sbjct: 576 ----------TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIII-----DGLFEAG 620
Query: 416 MLVVEKIKSLRHSKPL----EITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 470
V K+K ++ + T++ ++ D+ I +F+ ++ + + +I T+N
Sbjct: 621 RTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLN 680
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
M+ + +AK+LF +R+ L P TYS M+
Sbjct: 681 TMIAGMFQTRRVEEAKDLFASISRSG-------------LVPCAVTYSIMITNLLKEGLV 727
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
E E ++ M +GC+ D LL H LL+ EI
Sbjct: 728 EEAEDMFSSMQNAGCEPDS----------------RLLNHVVRELLKKNEI 762
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 165/429 (38%), Gaps = 55/429 (12%)
Query: 93 FRQLASESKEFAGDNLKRENLRELKEMFEKDL---NWVLDD-----DVQLGSDYFAKNVE 144
+ L ++ K D+L R + E + D+ N V+D DV D F + V+
Sbjct: 191 LKSLCNQGKSGQADDLLRM-MAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 249
Query: 145 WHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKG 204
+ + + L R M K F+R M G++ L+ G G
Sbjct: 250 RGIPPDLVTYSSVVHALC---KARAMD-KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTG 305
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPD 263
W++A+ V ++ + L L+ L K G+ EA +F+ M ++ N PD
Sbjct: 306 QWKEAVRVFKE---MRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQN--PD 360
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
+ +Y + G L ++ L + M + PD+ +N ++ A
Sbjct: 361 VFSYTIMLNGYATKGCLVDMTDLFDLMLGDG---------------IAPDIYTFNVLIKA 405
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
+F ++R G+KP TY ++ A GK+++A+
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTY------------MTVIAALCRIGKMDDAMEK 453
Query: 384 VRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 443
M +GVV Y+ L C +G A ++ +I + + L+I F G II+++
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEI--MNNGMRLDIVFFGSIINNL 511
Query: 444 -DGGHIDDCISIFQ-HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA----NS 497
G + D +IF + P+ N ++ Y KA +F+ A N
Sbjct: 512 CKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 571
Query: 498 SGY-TFLSG 505
GY T ++G
Sbjct: 572 VGYGTLVNG 580
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 110/292 (37%), Gaps = 28/292 (9%)
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
R VL P Y +++ C +H+ + F QL ++GL+ A
Sbjct: 102 RAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAI------------ 149
Query: 363 LLKVLVRAFWEEGKINEAV-AAVRNMEQRGVVGTASVYYELACCLCNNGR-WQDAMLVVE 420
+ L++ F E + +EA+ + + G V Y L LCN G+ Q L+
Sbjct: 150 IASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRM 209
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 479
+ P + + +I G ++ +F+ M + P++ T ++++ +
Sbjct: 210 MAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKA 269
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
KA+ + + PD +TY++++ ++ QW+ V+K
Sbjct: 270 RAMDKAEAFLRQMVNKG-------------VLPDNWTYNNLIYGYSSTGQWKEAVRVFKE 316
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
M D L+ + GK FD++ G+ P +T ML
Sbjct: 317 MRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIML 368
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 111/518 (21%), Positives = 196/518 (37%), Gaps = 124/518 (23%)
Query: 186 LMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL------LAILG 239
L F + QMLK+ G++ +++ +L+ + D+ + TKL L +
Sbjct: 85 LGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDV---ILCTKLIKGFFTLRNIP 141
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
KA R E L F PD+ AY+++ ++ + + ++++RMR K
Sbjct: 142 KAVRVMEILEKFG--------QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD----- 188
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES- 358
PD V YN ++ + + V QL +P+ TY + +E+
Sbjct: 189 ----------FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEAT 238
Query: 359 ----------------YRRCL------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
R L ++R +EG ++ A VRN+E +G
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
Y L L N G+W++ ++ K+ S P +T++ LI + G I++ +++ +
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFS-EKCDPNVVTYSILITTLCRDGKIEEAMNLLK 357
Query: 457 HMK------------------------------------DHCEPNIGTVNAMLKVYSRND 480
MK D C P+I N +L +N
Sbjct: 358 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 481 MFSKAKELF----EETTRANSSGYTFL------SGD------------GAPLKPDEYTYS 518
+A E+F E NSS Y + SGD + PDE TY+
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 519 SMLEASATAHQW-EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDS 574
SM+ E FE + + + C+ + + +V K H +E A +S
Sbjct: 478 SMISCLCREGMVDEAFELL---VDMRSCEFHPSVVTYNIVLLGFC-KAHRIEDAINVLES 533
Query: 575 LLEAGEIPHPLFFTEMLIQAIVQSNYE-KAVALINAMA 611
++ G P+ +T +LI+ I + Y +A+ L N +
Sbjct: 534 MVGNGCRPNETTYT-VLIEGIGFAGYRAEAMELANDLV 570
>gi|255660988|gb|ACU25663.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 376
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 138/337 (40%), Gaps = 47/337 (13%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
++G A R++N ++E + PD Y+++ +V +K+ +L E M ++ ++ +
Sbjct: 2 ESGDIDGAERVYNEIVES-KVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGREGNRSVS 60
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+ +N ++ + + + V +++ ++KSG + TYG
Sbjct: 61 S----------------FNIMMRGLFDNGKVEEVIXIWELMKKSGFVEDSITYG------ 98
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
+LV F + G I++++ + EQ+G V A Y + LC A+ V+
Sbjct: 99 ------ILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVCVL 152
Query: 420 EK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYS 477
IKS KP + LI + +D I +F+ M HC P I T N ++
Sbjct: 153 NGMIKS--GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLC 210
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+N+MF +A L +E L P TYS + + H+ E ++
Sbjct: 211 KNEMFGEAYNLVKELLDKG-------------LNPGVITYSMLXKGLCLDHKVEKALQLW 257
Query: 538 KGMALSGCQLDQTKHAWLLVEASRAGKC-HLLEHAFD 573
+ G + D H L+ GK H L FD
Sbjct: 258 NQVTSKGFKPDVQMHNILIHGLCSVGKMQHALSLYFD 294
>gi|357436823|ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477735|gb|AES58938.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 587
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 130/319 (40%), Gaps = 33/319 (10%)
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+ RK D P + VYN +LN + + K ++++++ ++PS TYG +E Y
Sbjct: 241 LRRKETDLGWVPSIRVYNIMLNGWFRARKLKHAERLWEEMKNENVRPSVVTYGTLVEGY- 299
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
C ++ ++ +A+ V M + G+ A VY + L GR+++A+ ++E
Sbjct: 300 -CRMR----------RVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMME 348
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 479
+ L+ L T+ L+ G I+ I + M P T N + +SR
Sbjct: 349 RFHVLQIGPTLS-TYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYNYFFRYFSRC 407
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
+ L+ T+ SG+ PD TY +L+ + E V
Sbjct: 408 GKVDEGMNLY---TKMIESGHN----------PDRLTYHLVLKMLCEEEKLELAVQVSME 454
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIV 596
M G +D L K H LE A F+ ++ G IP L F ++ ++
Sbjct: 455 MRHKGYDMDLATSTML---THLLCKMHKLEEAFAEFEDMIRRGIIPQYLTFQKLNVELKK 511
Query: 597 QSNYEKAVALINAMAYAPF 615
Q E A L + M+ P+
Sbjct: 512 QGMNEMARKLCHLMSSVPY 530
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 155/383 (40%), Gaps = 57/383 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+ YT ++ + GK GR E+L +F ML + C P++ AY+++ L + G++ + + L
Sbjct: 305 YTYTIMIRMTGKMGRAEESLALFEEMLTKGCT--PNLIAYNTMIQALSKSGMVDKAILLF 362
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW---------------KG 332
M IKN R P+ Y+ +LN V Q K
Sbjct: 363 CNM-------IKNNCR--------PNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFINKS 407
Query: 333 VF-WVFKQLRKSGLKPSAATYGLAMESYR----RCLLKVLVRAFWEEGKINEAVAAVRNM 387
++ ++ + L K G A M S+ R ++ + GK EA+ + +
Sbjct: 408 IYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKV 467
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT-GLIISSMDG- 445
++G+ +Y + L G+ + + + + ++ P FT ++ISS+
Sbjct: 468 HEKGISTDTMMYNTVLSTL---GKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRV 524
Query: 446 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G + + + +F+ ++ C+P+I + N+++ +N +A FL
Sbjct: 525 GKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAH-------------MRFLE 571
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
L PD TYS+++E + E ++ M GC + + LL RAG+
Sbjct: 572 MQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGR 631
Query: 565 CHLLEHAFDSLLEAGEIPHPLFF 587
+ L E G P + +
Sbjct: 632 TAETVDLYAKLREQGLTPDSITY 654
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 100/245 (40%), Gaps = 32/245 (13%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
+ +L+ L G +A+ +L V+ +K +Y +L+ LGK + ++
Sbjct: 445 ISMLESLCRGGKTVEAIELLSKVH---EKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEK 501
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M +D +PDI Y+ + +LG+VG +KE V++ E + K PD
Sbjct: 502 MKQD-GPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCK---------------PD 545
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
++ YN+++N + F +++ GL P TY L+ F +
Sbjct: 546 IISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYS------------TLIECFGK 593
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
K+ A + M +G Y L CL GR + + + K++ + P I
Sbjct: 594 TDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLRE-QGLTPDSI 652
Query: 434 TFTGL 438
T+ L
Sbjct: 653 TYAIL 657
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 30/225 (13%)
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
++K L+ +A TY RCLL+ +R+ + N + N Q + Y
Sbjct: 225 IKKWDLRLNAYTY--------RCLLQAHIRSRDSDRAFNVYMEMWSNGYQLDIFA----Y 272
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 458
L L + + + V + +K L+H P E T+T +I + G ++ +++F+ M
Sbjct: 273 NMLLDALAKDEQLDRSYKVFKDMK-LKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEML 331
Query: 459 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
C PN+ N M++ S++ M KA LF + N +P+E+TYS
Sbjct: 332 TKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNC-------------RPNEFTYS 378
Query: 519 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
+L Q + V + +S ++++ +A+L+ S+ G
Sbjct: 379 IILNVLVAEGQLGRLDEV---LEVSNKFINKSIYAYLVRTLSKLG 420
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 79/216 (36%), Gaps = 50/216 (23%)
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+R + S R N++ + W + D+ YN +L+A Q + VFK ++ P
Sbjct: 245 IRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDE 304
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY +++R + G+ E++A M +G
Sbjct: 305 YTY------------TIMIRMTGKMGRAEESLALFEEMLTKGCT---------------- 336
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
P I + +I + G +D I +F +M K++C PN T
Sbjct: 337 --------------------PNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFT 376
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTR-ANSSGYTFL 503
+ +L V + E+ E + + N S Y +L
Sbjct: 377 YSIILNVLVAEGQLGRLDEVLEVSNKFINKSIYAYL 412
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 22/184 (11%)
Query: 448 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE-TTRANSSGYTFL-- 503
ID I M +D I TVN ++K++S N+ L ++ R N+ Y L
Sbjct: 183 IDQVREILSQMDRDQIRGTISTVNILIKIFSSNEDLELCTGLIKKWDLRLNAYTYRCLLQ 242
Query: 504 ------SGDGA----------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
D A + D + Y+ +L+A A Q + V+K M L C
Sbjct: 243 AHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNP 302
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVAL 606
D+ + ++ + G+ F+ +L G P+ + + M IQA+ +S +KA+ L
Sbjct: 303 DEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTM-IQALSKSGMVDKAILL 361
Query: 607 INAM 610
M
Sbjct: 362 FCNM 365
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 132/338 (39%), Gaps = 45/338 (13%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
+YPDI Y+++ GL++E +L+ M PSK P + YN
Sbjct: 256 VYPDIVTYNTLISAYSSQGLMEEAFELMHAM---PSKG------------FSPGVYTYNT 300
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-GLAMESYRRCLLKVLVRAFWEEGKIN 378
V+N +++ VF ++ +SGL P + TY L ME+ ++ G
Sbjct: 301 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK-------------GDAV 347
Query: 379 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
E +M R VV + + +G A++ +K P + +T L
Sbjct: 348 ETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE-AGLIPDNVIYTIL 406
Query: 439 IISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
I G I + +++ M + C ++ T N +L + M +A +LF E T
Sbjct: 407 IQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERG- 465
Query: 498 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 557
L PD YT + +++ + ++K M +LD + LL
Sbjct: 466 ------------LFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLD 513
Query: 558 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
+ G + + ++ +P P+ F+ +L+ A+
Sbjct: 514 GFGKVGDIDTAKEIWADMVSKEILPTPISFS-ILVNAL 550
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 138/341 (40%), Gaps = 26/341 (7%)
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRC-----LLKVLVRAFWEEGKINEAVAAVRNMEQR 390
V + +R+SG+ L + +Y C + +L+R F + K+ EA A + +
Sbjct: 126 VLRMIRRSGVSRVEIVNSL-VSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSK 184
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHID 449
G + L L G + A + ++I R + + ++++++ G ++
Sbjct: 185 GYTVSIDACNALIGSLVRIGWVELAWRIYQEIS--RSGVGVNVYTLNIMVNALCKDGKME 242
Query: 450 DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
+ +++ P+I T N ++ YS + +A EL S G++
Sbjct: 243 KVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMP---SKGFS------- 292
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
P YTY++++ ++E + V+ M SG D T + LL+EA + G
Sbjct: 293 ---PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVET 349
Query: 569 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
E+ F + +P + F+ M+ N +KA+ N++ A +T L +
Sbjct: 350 ENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 409
Query: 629 NEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 669
+ + L N + A +T + + LH LC+
Sbjct: 410 YCRKGMISEAMNLRNEMLQQGCAMDVVTYNTI---LHGLCK 447
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/364 (19%), Positives = 139/364 (38%), Gaps = 60/364 (16%)
Query: 224 DLKSRFV------YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
D++SR V ++ ++++ ++G +AL FN +++ L PD Y + +
Sbjct: 355 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN-SVKEAGLIPDNVIYTILIQGYCRK 413
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G++ E + L M Q+ D+V YN +L+ +F
Sbjct: 414 GMISEAMNLRNEMLQQGCAM---------------DVVTYNTILHGLCKRKMLGEADKLF 458
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
++ + GL P + T L +L+ + G + A+ + M+++ +
Sbjct: 459 NEMTERGLFPDSYT------------LTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVV 506
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y L G A + + S + P I+F+ L+ + GH+ + ++
Sbjct: 507 TYNTLLDGFGKVGDIDTAKEIWADMVS-KEILPTPISFSILVNALCSKGHLSEAFRVWDE 565
Query: 458 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE---------ETTRANSSGYTFLSGDG 507
M +P + N+M+K Y R+ S + E + N+ Y F+ +
Sbjct: 566 MISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEEN 625
Query: 508 ---------------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
L PD +TY+S+L +Q + E V + M G D++ +
Sbjct: 626 MSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTY 685
Query: 553 AWLL 556
L+
Sbjct: 686 TSLI 689
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/295 (18%), Positives = 109/295 (36%), Gaps = 29/295 (9%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N ++NA + + V ++++ G+ P TY L+ A+ +G +
Sbjct: 229 NIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTY------------NTLISAYSSQGLM 276
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFT 436
EA + M +G Y + LC +G+++ A V ++ LR P T+
Sbjct: 277 EEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM--LRSGLSPDSTTYR 334
Query: 437 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
L++ + G + +IF M+ P++ ++M+ +++R+ KA F A
Sbjct: 335 SLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 394
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
L PD Y+ +++ + M GC +D + +
Sbjct: 395 G-------------LIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTI 441
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L + + F+ + E G P T ++ N + A+ L M
Sbjct: 442 LHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKM 496
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 156/391 (39%), Gaps = 57/391 (14%)
Query: 190 EGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALR 249
+G + L+ GL G +A+ + W Y L +K + L+ L +AG EA +
Sbjct: 407 DGLLTLLVSGLCQNGKQSEAIEL--W-YRLLEKGFAANTVTSNALIHGLCEAGSKEEAAK 463
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
+ MLE L D +Y+++ + + G ++E KL E M ++
Sbjct: 464 LLKEMLER-GLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRG--------------- 507
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-------- 361
++PD+ YN +L+ + + ++ + +K+G P A TYG+ ++ Y +
Sbjct: 508 IQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGE 567
Query: 362 ---------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
+ L+RA+ E G + EA +M RG+ T++ Y L L
Sbjct: 568 KLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGL 627
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 465
N G A ++++++ S P + +T LI G + SI Q M ++ PN
Sbjct: 628 SNIGLVDSANQLLDEMRKEGLS-PNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPN 686
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
T M+ + + A +L E + + PD TY+++
Sbjct: 687 KITYTIMINGHCKLGNMKAAAKLLNEMAQKG-------------IVPDAVTYNALTNGFC 733
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ E V M+ G LD + L+
Sbjct: 734 KEGKMEEALKVCDLMSTGGISLDDITYTTLI 764
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L P L N +L++ V +++ K + VF + G+ P L +V
Sbjct: 158 LFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVY------------LFSTMVN 205
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
AF G++++A+ R ME+ GV Y + LC NGR +A EK++ R K
Sbjct: 206 AFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKER-VK 264
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKEL 488
P +T+ LI + D+ I + M D PN N ++ Y R S A ++
Sbjct: 265 PSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQI 324
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
++ S+G + P+ T +S+++ ++Q E+ E++ + M G ++
Sbjct: 325 RDDMI---SNG----------ISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVIN 371
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 593
Q ++ KC FDS L LF EML++
Sbjct: 372 QGTFTSVIHRLCL--KCR-----FDSAL--------LFIMEMLLR 401
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 67/349 (19%), Positives = 132/349 (37%), Gaps = 63/349 (18%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
++++ ++ GR +A+ +F M E + P++ Y+++ L + G L E + E
Sbjct: 198 YLFSTMVNAFCTGGRVDDAIELFRKM-EKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKE 256
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M + +R+K P LV Y ++N V ++ + K++ G P+
Sbjct: 257 KMEK---ERVK------------PSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPN 301
Query: 349 AATYGLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVR 385
Y ++ Y R L++ + + ++ A +
Sbjct: 302 NVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLE 361
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M G V + + LC R+ A+L + ++ LR+ KP + T L+
Sbjct: 362 EMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEML-LRNFKPNDGLLTLLVSGLCQN 420
Query: 446 GHIDDCISI-FQHMKDHCEPNIGTVNAML----KVYSRNDMFSKAKELFEETTRANSSGY 500
G + I + ++ ++ N T NA++ + S+ + KE+ E +S Y
Sbjct: 421 GKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISY 480
Query: 501 TFL---------SGDGAPLK---------PDEYTYSSMLEASATAHQWE 531
L +G LK PD YTY+ +L + E
Sbjct: 481 NTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIE 529
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 139/343 (40%), Gaps = 59/343 (17%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
R + S+ VY ++ R + + + AG+PH A+++F L + + D+ +
Sbjct: 115 RDSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVF-LSMHQFGCFQDLQS 173
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR--KNWDPVLEPDLVVYNAVLNAC 324
++++ L + SKR++ + K + D V YN ++N
Sbjct: 174 FNTILDVLCK------------------SKRVEMAYNLFKVFKGKFRADCVSYNVMVNGW 215
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY------------------RRCLLKV 366
+ + K++ K GL P+ +Y ++ Y R C + V
Sbjct: 216 CLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDV 275
Query: 367 L-----VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
+ + F G+I A M ++GV+ + + Y LC +A+++ E+
Sbjct: 276 ITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEE 335
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 480
+ ++ P IT+ +I G ++ + MKD CEPN+ T N +++ +
Sbjct: 336 M-VVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEG 394
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
KA +LF++ T SGD P+ TY+ ++ A
Sbjct: 395 EIDKALDLFQKMT----------SGDCL---PNLDTYNILISA 424
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/352 (18%), Positives = 146/352 (41%), Gaps = 42/352 (11%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
++P + ++++ L G +KE V+L M ++ EP+++ YN
Sbjct: 154 IHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGH---------------EPNVISYNT 198
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
++N + VFK++ ++G KP TY ++ + ++ +N+
Sbjct: 199 IINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTY------------NTIIDSLCKDRLVND 246
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
A+ + M RG+ Y + C G+ +A + +++ R P +T T L+
Sbjct: 247 AMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVG-RDVMPDTVTLTILV 305
Query: 440 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
G + + +F+ M + EPNI T NA++ Y + ++AK++FE R +
Sbjct: 306 DGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCA 365
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
P ++Y+ ++ + + + + + M D ++ L+
Sbjct: 366 -------------PGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQG 412
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ G+ + F + G +P+ + ++ +L + ++A+ L+ +M
Sbjct: 413 LCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSM 464
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 123/296 (41%), Gaps = 43/296 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++ G+ +EA R+F M+ ++ PD + L + G++ E + E
Sbjct: 264 FTYNCMVHGFCILGQLNEATRLFKEMVGR-DVMPDTVTLTILVDGLCKEGMVSEARLVFE 322
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +K +EP++ YNA+++ VF+ + + G P
Sbjct: 323 TMTEKG---------------VEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPG 367
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
+Y +L+ F + +++EA + + M + + Y L LC
Sbjct: 368 VHSY------------NILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ 415
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 467
GR ++A+ + +++ S P +T++ L+ GH+D+ + + + M++ EPNI
Sbjct: 416 FGRPKEALNIFKEMCSY-GLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIV 474
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+++ AKELF + L DG ++P TY+ M++
Sbjct: 475 HHTILIEGMFIAGKLEVAKELFSK-----------LFADG--IRPTIRTYTVMIKG 517
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 94/222 (42%), Gaps = 17/222 (7%)
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKI 422
L VL+ ++ AV+ + M + G+ TAS + L LCN G+ ++A+ L E +
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 481
+ R +P I++ +I G+ + +F+ M ++ C+P++ T N ++ ++ +
Sbjct: 186 R--RGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRL 243
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
+ A E E + G P P+ +TY+ M+ Q ++K M
Sbjct: 244 VNDAMEFLSE-----------MLDRGIP--PNVFTYNCMVHGFCILGQLNEATRLFKEMV 290
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
D L+ + G F+++ E G P+
Sbjct: 291 GRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPN 332
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 132/337 (39%), Gaps = 40/337 (11%)
Query: 111 ENLRELKEMFEKD-------LNWVLDDDVQLGSDYFAKNV-EWHPEKRWRSEAEAIRVLV 162
E R KEM +D L ++D + G A+ V E EK L+
Sbjct: 281 EATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALM 340
Query: 163 DRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDK 222
D + + + K IM + G L+ G +A S+L +Y
Sbjct: 341 DGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALN 400
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
D + Y+ L+ L + GRP EAL IF M L P++ Y + + G L E
Sbjct: 401 PDTVT---YSTLMQGLCQFGRPKEALNIFKEMCSY-GLLPNLVTYSILLDGFCKHGHLDE 456
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
+KL++ M++K LEP++V + ++ + + + +F +L
Sbjct: 457 ALKLLKSMQEKK---------------LEPNIVHHTILIEGMFIAGKLEVAKELFSKLFA 501
Query: 343 SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
G++P+ TY V+++ +EG +EA R ME G + + Y +
Sbjct: 502 DGIRPTIRTY------------TVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVM 549
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
N A+ +++++ R S L TF L+
Sbjct: 550 IQGFLQNQDSSTAIRLIDEMVGKRFSANLS-TFQMLL 585
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 87/475 (18%), Positives = 185/475 (38%), Gaps = 52/475 (10%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E++ + +L+D L + T K + + M G+ ++ GL G +
Sbjct: 3 ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFE 62
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A S+L + ++ S Y L++ L K A + + + PD+ Y
Sbjct: 63 RAHSLLAV---MAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSS-GFVPDVVTY 118
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+A L + G + E +L++ M P+LV YN +++ +
Sbjct: 119 SILADGLCKRGRIDEAFELVKEMSGNGCT---------------PNLVTYNTLIDGLCKA 163
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ + + + + L SG P TY ++V +EG++++A+ V M
Sbjct: 164 SKTEKAYELLETLVSSGFVPDVVTY------------TIIVDGLCKEGRLDKALKMVEGM 211
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+RG + Y L LC GR +A + +++ S + + + L+
Sbjct: 212 LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS-KDCTADALAYVSLVNGYCKSSR 270
Query: 448 IDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
+ + ++ P I NA++ Y + + +FE+ ++ G
Sbjct: 271 TKEAQKVVDGIRG--TPYIDVYNALMDGYCKEGRLDEIPNVFED-----------MACRG 317
Query: 508 APLKPDEYTYSSMLEASATAHQW-EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
P+ TY+ +++ + E F ++ + M +GC D + ++ +A K
Sbjct: 318 CV--PNIKTYNIVMDGLCKHGKVDEAFPFL-ESMHSAGCVPDVVSYNIIIDGLFKASKPK 374
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA---PFHIT 618
D +++AG P + + ++ Q + ++ AV ++ M A P ++T
Sbjct: 375 EARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVT 429
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 107/542 (19%), Positives = 199/542 (36%), Gaps = 95/542 (17%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + T K ++ + + SG + ++ GL +G +A L V G+
Sbjct: 156 LIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKA---LKMVEGML 212
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGL 279
+ S YT L+ L + GR EA IF M+ +DC D AY S+ +
Sbjct: 213 KRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCT--ADALAYVSLVNGYCKSSR 270
Query: 280 LKELVKLIERMRQKPSKRIKNM----------------------------HRKNWDPVLE 311
KE K+++ +R P + N + K ++ V++
Sbjct: 271 TKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMD 330
Query: 312 ------------------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
PD+V YN +++ + + K V Q+ ++G+ P
Sbjct: 331 GLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPP 390
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
A TY L+ F +E + ++AV ++NM + GV Y L L
Sbjct: 391 DAVTY------------NTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLS 438
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLE--ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 464
R DA ++ ++ LR+ + T+ +I G + + + HM H E
Sbjct: 439 QTNRLGDAYELMHEM--LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEA 496
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEE--TTRANSSGYTFLSG-------DGAP------ 509
N T N + + +A L E T R S T + G D A
Sbjct: 497 NTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREM 556
Query: 510 -----LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
L +T++ +++A + + + + M GC + ++ + K
Sbjct: 557 VAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDK 616
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 624
FD + G + + +T ++ Q ++A+ ++ MA + I + + +
Sbjct: 617 VDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRK 676
Query: 625 LF 626
L+
Sbjct: 677 LY 678
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 99/471 (21%), Positives = 183/471 (38%), Gaps = 79/471 (16%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+KD D S Y+ L+ L GR EA+ + M++ + P + Y V+L G
Sbjct: 264 VKDGCDPNS-VTYSTLINGLCSEGRLEEAMDMLEEMVQK-GIEPTVYTYTIPLVSLCDAG 321
Query: 279 LLKELVKLIERMR--------QKPSKRIKNMHR------------KNWDPVLEPDLVVYN 318
E V+L+ +M+ Q + I + R K L P V YN
Sbjct: 322 CSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYN 381
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL-------------- 364
A++N +++ F +FK + G PS TY ++ + CL+
Sbjct: 382 ALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCF--CLMGDIQKAMVIFDKML 439
Query: 365 -----------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
L+ + ++G +N A+ + M+ G+ A Y EL G+ +
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLE 499
Query: 414 DAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNA 471
A + + + H P +T+T +I + +DD +++F M + P+ T N
Sbjct: 500 HATSLFYGM--MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557
Query: 472 MLKVYSRNDMFSKAK----ELFEETTRANSSGYT-FLSG------DGAPLK--------- 511
M+ +S+ + S+A+ ++ ++ N YT F+ G G K
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617
Query: 512 --PDEYTYSSMLEA---SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
P+ YTYSS++ A E + + + + GC+ + + L+ G+C+
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAEMYNLLAR-LTHYGCEPNVDTYTTLVKGLCGEGRCY 676
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHI 617
+ S+ + G P + +LI E A+ + +M F +
Sbjct: 677 EADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQL 727
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 160/416 (38%), Gaps = 84/416 (20%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T LL LGK A ++ ML + P + ++++ L + G ++E KLI
Sbjct: 170 FTTLLIQLGKFDMVDLARDMYIKMLNS-GIRPSLLTFNTMINILCKKGRVQE-AKLIMS- 226
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
H +D P+ Y +++ +H F +F ++ K G P++
Sbjct: 227 -----------HIFRYDAY--PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSV 273
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY L+ EG++ EA+ + M Q+G+ T Y LC+ G
Sbjct: 274 TY------------STLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAG 321
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIIS-SMDG------------------------ 445
+A+ ++ K+K R P TFT LI S DG
Sbjct: 322 CSSEAVELLGKMKK-RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTY 380
Query: 446 ----------GHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
G + +IF+ M H P+ T N ++K + KA +F++ +
Sbjct: 381 NALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLK 440
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
A SS P+ TY++++ + + M +G + D +
Sbjct: 441 AGSS-------------PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487
Query: 555 LLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 607
L+ SR GK LEHA F ++E G P+ + +T ++ + + A+AL
Sbjct: 488 LISGFSRGGK---LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALF 540
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 120/308 (38%), Gaps = 50/308 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +G+ AM +L+ + G K D + YT+L++ + G+ A +F M+
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPD---AWTYTELISGFSRGGKLEHATSLFYGMM 509
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNWDPV--- 309
E + P+ Y ++ + + + + L +M + PS + N+ +
Sbjct: 510 EH-GISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568
Query: 310 --------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP-----SAA 350
L P+++ Y + ++ + + F +F ++ K P S+
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Query: 351 TYGLAME---------------SYRRC-----LLKVLVRAFWEEGKINEAVAAVRNMEQR 390
YGL E ++ C LV+ EG+ EA V +M+++
Sbjct: 629 IYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKK 688
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
G+ + +Y L C N + + A+ + + +L L + LI + I++
Sbjct: 689 GLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLS-DYKALICALCKENFIEE 747
Query: 451 CISIFQHM 458
IFQ M
Sbjct: 748 AQCIFQTM 755
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/399 (18%), Positives = 160/399 (40%), Gaps = 46/399 (11%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
+D + R L S ++K+L+ + K+ + +F+ M E C + D+ +Y+ V
Sbjct: 54 IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNIVIN 112
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
L + + ++ +M + EPD+V ++++N ++
Sbjct: 113 CLCRCSRFVIALSVVGKMMKFG---------------YEPDVVTVSSLINGFCQGNRVFD 157
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+ ++ + G +P Y ++ + G +N+AV ME+ GV
Sbjct: 158 AIDLVSKMEEMGFRPDVVIY------------NTIIDGSCKIGLVNDAVELFDRMERDGV 205
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 452
A Y L LC +GRW DA ++ + +R P ITFT +I + G + +
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDM-VMRDIVPNVITFTAVIDVFVKEGKFSEAM 264
Query: 453 SIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 511
+++ M C +P++ T N+++ + +AK++ +
Sbjct: 265 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC-------------L 311
Query: 512 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
PD TY++++ + + + +++ MA G D + ++ +AG+ +
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 572 FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
F + P+ ++ +L + EKA+ L M
Sbjct: 372 FSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENM 407
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 127/316 (40%), Gaps = 48/316 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+A L +GR +A R+ ++++ D + P++ + +V + G E +KL E
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRD--IVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M ++ ++PD+ YN+++N + + + G P
Sbjct: 270 MTRR---------------CVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L+ F + +++E R M QRG+VG Y +
Sbjct: 315 VTY------------NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 362
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
GR A + ++ S + + I GL ++ ++ + +F++M K E +I T
Sbjct: 363 GRPDAAQEIFSRMDSRPNIRTYSILLYGLCMN----WRVEKALVLFENMQKSEIELDITT 418
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
N ++ + A +LF LS G LKPD +Y++M+
Sbjct: 419 YNIVIHGMCKIGNVEDAWDLFRS-----------LSCKG--LKPDVVSYTTMISGFCRKR 465
Query: 529 QWEYFEYVYKGMALSG 544
QW+ + +Y+ M G
Sbjct: 466 QWDKSDLLYRKMQEDG 481
>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
Length = 506
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 147/386 (38%), Gaps = 85/386 (22%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL AM ++ + G+ + + + F +T +L L R EAL + ++M
Sbjct: 131 LLKGLCADKRTDDAMDIV--LRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMA 188
Query: 256 EDCN-LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+D P++ +Y +V GLLK P K +R+ D + P++
Sbjct: 189 DDGGGCLPNVVSYSTVTD-----GLLKG---------GDPDKAYAT-YREMLDRRILPNV 233
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V Y++++ A V ++ K+G+ P+ TY LV F
Sbjct: 234 VTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTY------------TSLVHGFCSS 281
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV------------VEKI 422
G++ EA+ + M GV Y LC NGR +A + +
Sbjct: 282 GQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTY 341
Query: 423 KSLRHS----------------------KPLEITFTGLIISSMDGGHIDDCISIFQHMKD 460
SL H +P F LI +S G +D+ + +F M+
Sbjct: 342 SSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRH 401
Query: 461 H-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
+PN T N ++ Y + A LF+E S+G + P+ TY+
Sbjct: 402 QGLKPNCVTYNTLINGYCKITRMENALALFQEMV---SNG----------VSPNFITYNI 448
Query: 520 MLEA------SATAHQWEYFEYVYKG 539
ML+ + TA ++ Y + + G
Sbjct: 449 MLQGLFRTGRTGTAKEF-YVQIIKSG 473
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 96/253 (37%), Gaps = 18/253 (7%)
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+ G ++A A R M R ++ Y + LC AM V +++
Sbjct: 207 GLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVK-NGVT 265
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P T+T L+ G + + I + M + EPN+ T ++ + +N ++A+++
Sbjct: 266 PNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKI 325
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F + LKPD TYSS+L A ++ M S Q D
Sbjct: 326 FYSMVKRG-------------LKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPD 372
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
L+ +++ GK F + G P+ + + ++ + E A+AL
Sbjct: 373 HYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQ 432
Query: 609 AM---AYAPFHIT 618
M +P IT
Sbjct: 433 EMVSNGVSPNFIT 445
>gi|297820862|ref|XP_002878314.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324152|gb|EFH54573.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 475
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 142/360 (39%), Gaps = 55/360 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA-AYHSVAVTLGQVGLLKELVKLIER 289
Y L+ I + G R+ + M++D +P A ++ + + G+ GL K+ V ++
Sbjct: 154 YHLLMKIFAECGEYKAMWRLVDEMVQDG--FPTTARTFNLLICSCGEAGLAKQAV--VQF 209
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ K N+ P YNA+LN+ + Q+K + WV++Q+ + G P
Sbjct: 210 MKSKTF---------NYRPFKHS----YNAILNSLLGVKQYKLIEWVYEQMLEDGFSPDV 256
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY + + W ++ + R ++ G + +Y L
Sbjct: 257 LTYNILL---------------WTNYRLGKMDRFDRLFDEMARDGLSPDFYTYNILLHIL 301
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEIT-----FTGLIISSMDGGHIDDCISIFQHM-KDHCE 463
G+ + + +L H K + I +T LI G+++ C M K C
Sbjct: 302 GKGNKPL---AALTTLNHMKEVGIDLSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCR 358
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
P++ M+ Y + KAKE+F+E T P+ +TY+SM+
Sbjct: 359 PDVVCYTVMITGYVVSGELEKAKEMFKEMTVEGQL-------------PNVFTYNSMIRG 405
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
A ++ ++ K M GC + ++ L+ +AGK +++ G H
Sbjct: 406 LCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIRDMVKKGHYVH 465
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 107/266 (40%), Gaps = 23/266 (8%)
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+L++ F E G+ V M Q G TA + L C G + A++ K K+
Sbjct: 156 LLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTF 215
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCIS-IFQHM-KDHCEPNIGTVNAMLKVYSRNDMFS 483
+ +P + ++ I++S+ G I +++ M +D P++ T N +L R
Sbjct: 216 NY-RPFKHSYNA-ILNSLLGVKQYKLIEWVYEQMLEDGFSPDVLTYNILLWTNYRLGKMD 273
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
+ LF+E R DG L PD YTY+ +L ++ M
Sbjct: 274 RFDRLFDEMAR-----------DG--LSPDFYTYNILLHILGKGNKPLAALTTLNHMKEV 320
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
G L + L+ SRAG ++ D +++AG P + +T M+ +V EKA
Sbjct: 321 GIDLSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELEKA 380
Query: 604 VALINAMAYAPFHITERQWTELFESN 629
+ M E Q +F N
Sbjct: 381 KEMFKEMT------VEGQLPNVFTYN 400
>gi|449465242|ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 690
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 155/383 (40%), Gaps = 57/383 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+ YT ++ + GK GR E+L +F ML + C P++ AY+++ L + G++ + + L
Sbjct: 310 YTYTIMIRMTGKMGRAEESLALFEEMLTKGCT--PNLIAYNTMIQALSKSGMVDKAILLF 367
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW---------------KG 332
M IKN R P+ Y+ +LN V Q K
Sbjct: 368 CNM-------IKNNCR--------PNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFINKS 412
Query: 333 VF-WVFKQLRKSGLKPSAATYGLAMESYR----RCLLKVLVRAFWEEGKINEAVAAVRNM 387
++ ++ + L K G A M S+ R ++ + GK EA+ + +
Sbjct: 413 IYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKV 472
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT-GLIISSMDG- 445
++G+ +Y + L G+ + + + + ++ P FT ++ISS+
Sbjct: 473 HEKGISTDTMMYNTVLSTL---GKLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRV 529
Query: 446 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G + + + +F+ ++ C+P+I + N+++ +N +A FL
Sbjct: 530 GKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAH-------------MRFLE 576
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
L PD TYS+++E + E ++ M GC + + LL RAG+
Sbjct: 577 MQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGR 636
Query: 565 CHLLEHAFDSLLEAGEIPHPLFF 587
+ L E G P + +
Sbjct: 637 TAETVDLYAKLREQGLTPDSITY 659
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 100/245 (40%), Gaps = 32/245 (13%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
+ +L+ L G +A+ +L V+ +K +Y +L+ LGK + ++
Sbjct: 450 ISMLESLCRGGKTVEAIELLSKVH---EKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEK 506
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M +D +PDI Y+ + +LG+VG +KE V++ E + K PD
Sbjct: 507 MKQD-GPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCK---------------PD 550
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
++ YN+++N + F +++ GL P TY L+ F +
Sbjct: 551 IISYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYS------------TLIECFGK 598
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
K+ A + M +G Y L CL GR + + + K++ + P I
Sbjct: 599 TDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAGRTAETVDLYAKLRE-QGLTPDSI 657
Query: 434 TFTGL 438
T+ L
Sbjct: 658 TYAIL 662
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 30/225 (13%)
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
++K L+ +A TY RCLL+ +R+ + N M +G Y
Sbjct: 230 IKKWDLRLNAYTY--------RCLLQAHIRSRDSDRAFN----VYMEMWSKGYQLDIFAY 277
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 458
L L + + + V + +K L+H P E T+T +I + G ++ +++F+ M
Sbjct: 278 NMLLDALAKDEQLDRSYKVFKDMK-LKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEML 336
Query: 459 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
C PN+ N M++ S++ M KA LF + N +P+E+TYS
Sbjct: 337 TKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNC-------------RPNEFTYS 383
Query: 519 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
+L Q + V + +S ++++ +A+L+ S+ G
Sbjct: 384 IILNVLVAEGQLGRLDEV---LEVSNKFINKSIYAYLVRTLSKLG 425
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 79/216 (36%), Gaps = 50/216 (23%)
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+R + S R N++ + W + D+ YN +L+A Q + VFK ++ P
Sbjct: 250 IRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNPDE 309
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY +++R + G+ E++A M +G
Sbjct: 310 YTY------------TIMIRMTGKMGRAEESLALFEEMLTKGCT---------------- 341
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
P I + +I + G +D I +F +M K++C PN T
Sbjct: 342 --------------------PNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFT 381
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTR-ANSSGYTFL 503
+ +L V + E+ E + + N S Y +L
Sbjct: 382 YSIILNVLVAEGQLGRLDEVLEVSNKFINKSIYAYL 417
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 22/184 (11%)
Query: 448 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE-TTRANSSGYTFL-- 503
ID I M +D I TVN ++K++S N+ L ++ R N+ Y L
Sbjct: 188 IDQVREILSQMDRDQIRGTISTVNILIKIFSSNEDLELCTGLIKKWDLRLNAYTYRCLLQ 247
Query: 504 ------SGDGA----------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
D A + D + Y+ +L+A A Q + V+K M L C
Sbjct: 248 AHIRSRDSDRAFNVYMEMWSKGYQLDIFAYNMLLDALAKDEQLDRSYKVFKDMKLKHCNP 307
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVAL 606
D+ + ++ + G+ F+ +L G P+ + + M IQA+ +S +KA+ L
Sbjct: 308 DEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTM-IQALSKSGMVDKAILL 366
Query: 607 INAM 610
M
Sbjct: 367 FCNM 370
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 107/512 (20%), Positives = 197/512 (38%), Gaps = 112/512 (21%)
Query: 186 LMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH 245
L F + QMLK+ G++ +++ +L+ + D+ + TKL+
Sbjct: 81 LGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDV---ILCTKLIKGFFTLRNVP 137
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
+A+R+ + LE PD+ AY+++ ++ + + ++++RMR K
Sbjct: 138 KAVRVMEI-LEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD----------- 184
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES------- 358
PD V YN ++ + + V QL +P+ TY + +E+
Sbjct: 185 ----FSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGV 240
Query: 359 ----------YRRCL------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
R L ++R +EG ++ A +RN+E +G Y L
Sbjct: 241 DEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNIL 300
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK--- 459
L N G+W++ ++ K+ S P +T++ LI + G I++ +++ + MK
Sbjct: 301 LRALLNQGKWEEGEKLMTKMFS-EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 359
Query: 460 ---------------------------------DHCEPNIGTVNAMLKVYSRNDMFSKAK 486
D C P+I N +L +N +A
Sbjct: 360 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 419
Query: 487 ELF----EETTRANSSGYTFL------SGD------------GAPLKPDEYTYSSMLEAS 524
E+F E NSS Y + SGD + PDE TY+SM+
Sbjct: 420 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCL 479
Query: 525 ATAHQWE-YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGE 580
+ FE + + + C+ + + +V K H +E A DS++ G
Sbjct: 480 CREGMVDKAFELL---VDMRSCEFHPSVVTYNIVLLGFC-KAHRIEDAIDVLDSMVGNGC 535
Query: 581 IPHPLFFTEMLIQAIVQSNYE-KAVALINAMA 611
P+ +T +LI+ I + Y +A+ L N +
Sbjct: 536 RPNETTYT-VLIEGIGFAGYRAEAMELANDLV 566
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 145/359 (40%), Gaps = 48/359 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLKELVK 285
+ LL +A R EAL I + PD+ +Y + +L G+ G +L++
Sbjct: 147 IIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 206
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
++ V PD+V Y+ V++ +FK++ + G+
Sbjct: 207 MMAE----------------GGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGI 250
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
P TY +V A + +++A A +R M +GV+ Y L
Sbjct: 251 PPDFVTY------------SSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYG 298
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSK-PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE- 463
+ G+W++A+ V ++++ RHS P +T + L+ S G I + +F M +
Sbjct: 299 YSSTGQWKEAVRVFKEMR--RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 356
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
PN+ + ML Y+ +LF+ + GDG + PD YT++ +++A
Sbjct: 357 PNVFSYTIMLNGYATKGCLVDMTDLFD-----------LMLGDG--IAPDIYTFNVLIKA 403
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
A + ++ M G + D + ++ R GK F+ +++ G P
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/444 (20%), Positives = 176/444 (39%), Gaps = 58/444 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKG + +A+ +L ++ + + F Y+ LL L G+ +A + +M
Sbjct: 152 LLKGFCEAKRTDEALDIL--LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 209
Query: 256 ED---CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
E C+ PD+ AY +V + G + + L + M Q+ + P
Sbjct: 210 EGGAVCS--PDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRG---------------IPP 252
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
D V Y++V++A + +Q+ G+ P+ TY L+ +
Sbjct: 253 DFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTY------------NNLIYGYS 300
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
G+ EAV + M + ++ L LC G+ ++A V + + +++ P
Sbjct: 301 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM-AMKGQNPNV 359
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
++T ++ G + D +F M D P+I T N ++K Y+ M KA +F E
Sbjct: 360 FSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNE 419
Query: 492 T----TRANSSGY-TFLSG-------DGA----------PLKPDEYTYSSMLEASATAHQ 529
+ + Y T ++ D A + PD+Y Y +++ T
Sbjct: 420 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 479
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
+ + + +G LD + ++ + G+ ++ FD + G P + ++
Sbjct: 480 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSM 539
Query: 590 MLIQAIVQSNYEKAVALINAMAYA 613
++ + EKA+ + +AM A
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSA 563
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 161/411 (39%), Gaps = 75/411 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K + G +AM + + + K D+ + Y ++A L + G+ +A+ FN M+
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVT---YRTVIAALCRIGKMDDAMEKFNQMI 456
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP--------SKRIKNMHRK--- 304
D + PD AYH + G L + +LI + S I N+ +
Sbjct: 457 -DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515
Query: 305 ---------NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ L P VVY+ +++ + + VF + +G++P+ YG
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYG-- 573
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
LV + + G+I+E ++ R M Q+G+ + +Y + +G ++
Sbjct: 574 ----------TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIII-----DGLFEAG 618
Query: 416 MLVVEKIKSLRHSKPL----EITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 470
V K+K ++ + T+ ++ D+ I +F+ ++ + + NI T+N
Sbjct: 619 RTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 678
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
M+ + +AK+LF +R+ L P TYS M+
Sbjct: 679 TMIAGMFQTRRVEEAKDLFASISRSG-------------LVPCVVTYSIMITNLIKEGLV 725
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
E E ++ M +GC+ D LL H LL+ EI
Sbjct: 726 EEAEDMFSSMQNAGCEPDS----------------RLLNHVVRELLKKNEI 760
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 89/482 (18%), Positives = 175/482 (36%), Gaps = 71/482 (14%)
Query: 129 DDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMF 188
+ DV D F + V+ + + + + L R M K F+R M G++
Sbjct: 232 EGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALC---KARAMD-KAEAFLRQMVNKGVLP 287
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL 248
L+ G G W++A+ V ++ L + L+ L K G+ EA
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKE---MRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344
Query: 249 RIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWD 307
+F+ M ++ N P++ +Y + G L ++ L + M
Sbjct: 345 DVFDTMAMKGQN--PNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG------------- 389
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
+ PD+ +N ++ A +F ++R G+KP TY + +
Sbjct: 390 --IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY------------RTV 435
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
+ A GK+++A+ M +GV Y+ L C +G A ++ +I + +
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEI--MNN 493
Query: 428 SKPLEITFTGLIISSM-DGGHIDDCISIFQ-HMKDHCEPNIGTVNAMLKVYSRNDMFSKA 485
L+I F II+++ G + D +IF + P + ++ Y KA
Sbjct: 494 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKA 553
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+F+ A ++P++ Y +++ + + +++ M G
Sbjct: 554 LRVFDAMVSAG-------------IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 600
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE-IPHPLFFTEMLIQAIVQSNYEKAV 604
+ + ++ D L EAG +P + F EM I + +
Sbjct: 601 KPSTILYNIII----------------DGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNI 644
Query: 605 AL 606
L
Sbjct: 645 VL 646
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 111/286 (38%), Gaps = 28/286 (9%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLV 368
VL P Y +++ C +H+ + F QL ++GL+ + + L+
Sbjct: 106 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNII------------IANHLL 153
Query: 369 RAFWEEGKINEAV-AAVRNMEQRGVVGTASVYYELACCLCNNGR-WQDAMLVVEKIKSLR 426
+ F E + +EA+ + + G V Y L LC+ G+ Q L+ +
Sbjct: 154 KGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGA 213
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
P + ++ +I G ++ +F+ M + P+ T ++++ + KA
Sbjct: 214 VCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKA 273
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+ + + P+ +TY++++ ++ QW+ V+K M
Sbjct: 274 EAFLRQMVNKG-------------VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 320
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
D + L+ + GK FD++ G+ P+ +T ML
Sbjct: 321 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIML 366
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 97/477 (20%), Positives = 177/477 (37%), Gaps = 68/477 (14%)
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
A + + L Q+GLL E + + R+ W P L NAVL+ V
Sbjct: 113 ALGVLVIALSQMGLLDEALYVFRRL---------------WT---LPALPACNAVLDGLV 154
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
+ + + + +F ++ + G+ PS TY L+ A +G + +A
Sbjct: 155 KARRSRCAWELFDEMLRRGMVPSVVTY------------NTLINACRYQGAVAKAQEMWD 202
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M R + Y + C LC G DA + + +K +P + T+ L+ G
Sbjct: 203 QMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKE-AGMRPNQYTYNVLMSGHCQG 261
Query: 446 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT--- 501
++ ++Q + + PN ++ + + FS+AK++F + R +
Sbjct: 262 DDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVY 321
Query: 502 -------FLSGDGA------------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
F SGD L PDE+T S ++ Q + +G+
Sbjct: 322 NSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVRE 381
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS---LLEAGEIPHPLFFTEMLIQAIVQSN 599
G L+ + L+ E R G LE A + + E G P+ + ++ ++
Sbjct: 382 DGVNLNAAAYNALIDEYCRNGN---LEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGK 438
Query: 600 YEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSN 659
+ A+A+ M +T L + D + + + + ITVS
Sbjct: 439 MQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSV 498
Query: 660 LSRALHALCRSEKERDLSSSAHFGSQ--AIDISPLHGIHEAFDVKETENVPSSSASM 714
L + LCR + +D + F + I S +H F +E +P+S+ M
Sbjct: 499 L---VDGLCRENRVQD---AVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYM 549
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 123/294 (41%), Gaps = 39/294 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV------------AVTLGQ 276
YT ++ +L + G +A R+F+ M ++ + P+ Y+ + A L Q
Sbjct: 214 ITYTSMICVLCEEGCIGDAERLFDAM-KEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQ 272
Query: 277 ----VGLLKELV---KLIERM-RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
GL+ V LI+ + K K+M R + P + VYN++++ S
Sbjct: 273 ELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSG 332
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ +++++ + GL P T ++VR + G+I A + +
Sbjct: 333 DAQEALSLYQEMTRLGLCPDEFT------------CSIVVRGLCDGGQIQVAARFLEGVR 380
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
+ GV A+ Y L C NG ++A+ ++ + +P ++++ LI G +
Sbjct: 381 EDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEV-GVEPNVVSYSSLIDGHSKLGKM 439
Query: 449 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA----KELFEETTRANS 497
++I+ M EPN+ T A++ +++N A KE+ E N+
Sbjct: 440 QIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNA 493
>gi|298711678|emb|CBJ32729.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 832
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 113/288 (39%), Gaps = 41/288 (14%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
L G G W+QA+ +L + D + YT + G+AG+ +AL +F
Sbjct: 493 LTACGVGGRWQQALELLPRALAVADGKPSSCLRSYTAAIKACGRAGQWEDALALFRRGQR 552
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVV 316
D L PD Y V G E + L+ M L P +
Sbjct: 553 D-GLQPDEVCYAEVMSACAGGGCADETLGLLREMPAAAG--------------LRPTVPC 597
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR---C--LLKVLVR-- 369
YNA + AC W+ + +++ GL P +T +A+ + RR C +L +L R
Sbjct: 598 YNAAIVACGAGGDWRRSVELLEEMPTVGLAPGVSTCNMAINALRRGGQCQRILDLLERMS 657
Query: 370 ------------------AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
A G+ EAV R ME+ GV Y L GR
Sbjct: 658 TAPGLPAPDATSYNTAITACESAGRFEEAVGLFRAMERIGVAPDVVGYTATIQALGRCGR 717
Query: 412 WQDAMLVVEKIKS-LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
W++A+ ++ +++S ++P T+ + ++ G + +S+F+ M
Sbjct: 718 WEEALALLGEVRSRATAAEPNVRTYVAAVHAAGHAGQWERAVSVFRLM 765
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 119/310 (38%), Gaps = 31/310 (10%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQ----LRKSGLKPSAATYGLAMESYRRCLLKV 366
EPDLV Y +NA + +W+ V K+ +R G G + E+ C
Sbjct: 405 EPDLVTYGIAINAYGNAGEWRRALGVLKESLPEMRTGG--------GASCENACLCF-AY 455
Query: 367 LVRAFWEEGKINEAVAAV-RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+RA G+ +EA+ + R++ GVV A V +E GRWQ A+ ++ + ++
Sbjct: 456 AIRACKHAGEFDEALGVLDRDVPATGVVPNALVLHEALTACGVGGRWQQALELLPRALAV 515
Query: 426 RHSKPLEI--TFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMF 482
KP ++T I + G +D +++F+ +D +P+ ++ +
Sbjct: 516 ADGKPSSCLRSYTAAIKACGRAGQWEDALALFRRGQRDGLQPDEVCYAEVMSACAGGGCA 575
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
+ L E A A L+P Y++ + A W + + M
Sbjct: 576 DETLGLLREMPAA------------AGLRPTVPCYNAAIVACGAGGDWRRSVELLEEMPT 623
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP--LFFTEMLIQAIVQSNY 600
G + + R G+C + + + A +P P + + +
Sbjct: 624 VGLAPGVSTCNMAINALRRGGQCQRILDLLERMSTAPGLPAPDATSYNTAITACESAGRF 683
Query: 601 EKAVALINAM 610
E+AV L AM
Sbjct: 684 EEAVGLFRAM 693
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 88/466 (18%), Positives = 170/466 (36%), Gaps = 68/466 (14%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
G W + +SVL + +K D K + + +++ AGR EA+ + + M ++ P
Sbjct: 349 GRWERGLSVL--MERTSEKTDRKWEVLPFNRVMQACVDAGRWQEAVALLDHMKDEVGAEP 406
Query: 263 DIAAYHSVAVTLGQVG----LLKELVKLIERMRQKPSKRIKNM------------HRKNW 306
D+ Y G G L L + + MR +N H +
Sbjct: 407 DLVTYGIAINAYGNAGEWRRALGVLKESLPEMRTGGGASCENACLCFAYAIRACKHAGEF 466
Query: 307 DPVLE------------PDLVVYNAVLNACVPSHQWKGVFWVF-KQLRKSGLKPSAATYG 353
D L P+ +V + L AC +W+ + + L + KPS+
Sbjct: 467 DEALGVLDRDVPATGVVPNALVLHEALTACGVGGRWQQALELLPRALAVADGKPSS---- 522
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
+ SY ++A G+ +A+A R ++ G+ Y E+ G
Sbjct: 523 -CLRSY-----TAAIKACGRAGQWEDALALFRRGQRDGLQPDEVCYAEVMSACAGGGCAD 576
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAM 472
+ + ++ ++ + +P + I++ GG + + + M P + T N
Sbjct: 577 ETLGLLREMPAAAGLRPTVPCYNAAIVACGAGGDWRRSVELLEEMPTVGLAPGVSTCNMA 636
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
+ R + +L E + A G P PD +Y++ + A +A ++E
Sbjct: 637 INALRRGGQCQRILDLLERMSTA----------PGLP-APDATSYNTAITACESAGRFEE 685
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI--------PHP 584
+++ M G D + + G+C E A L GE+ P+
Sbjct: 686 AVGLFRAMERIGVAPDVVGYTATI---QALGRCGRWEEALALL---GEVRSRATAAEPNV 739
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNE 630
+ + A +E+AV++ M T+R W+ + + E
Sbjct: 740 RTYVAAVHAAGHAGQWERAVSVFRLMLADSLVPTDRAWSAVISACE 785
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/336 (19%), Positives = 141/336 (41%), Gaps = 43/336 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y ++ + + + +A +F +++ PD Y+S+ + G + + ++E
Sbjct: 13 IYGMMIRLYARHNQVDQARGLF-FEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMED 71
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + + P YN V+NAC + WK + K++ ++G+ P
Sbjct: 72 MLR---------------AAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDL 116
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
T+ + + + + + ++A++ M+ V + CL
Sbjct: 117 VTHNIVLSALK------------NGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKI 164
Query: 410 GRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
G+ +A+ + ++ R P + +T+T ++ S G +++C +IF M + +PNI
Sbjct: 165 GQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIV 224
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
N++L Y+ M +A +F + +G L+PD +Y+S+L A +
Sbjct: 225 AYNSLLGAYASRGMHREALAIFN-----------LIKKNG--LRPDIVSYTSLLNAYGRS 271
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
Q E V+ M + C+ ++ + L+ AG
Sbjct: 272 AQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAG 307
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 149/353 (42%), Gaps = 56/353 (15%)
Query: 172 AKNWK----FVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRD 224
A NWK + M ++G+ + T +L LK + + +A+S + + G D
Sbjct: 94 AGNWKKALELCKKMTENGVGPDLVTHNIVLSALK---NGAQYSKAISYFEIMKGANVTSD 150
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVA---VTLGQVGLL 280
F ++ L K G+ EA+ +FN M E PD+ Y S+ GQV
Sbjct: 151 ---TFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENC 207
Query: 281 KELVKLIERMRQKPSKRIKN----------MHRKNWDPV-------LEPDLVVYNAVLNA 323
K + L+ KP+ N MHR+ L PD+V Y ++LNA
Sbjct: 208 KAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNA 267
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
S Q + VF +++K+ KP+ +Y L+ A+ G + EAV
Sbjct: 268 YGRSAQPEKAREVFNKMKKNSCKPNKVSY------------NALIDAYGSAGMLKEAVGL 315
Query: 384 VRNMEQRGV-VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE---ITFTGLI 439
+ ME+ G+ S+ LA C GR + + +E I S+ ++ + + I
Sbjct: 316 LHEMEKDGIQPDVVSISTLLAAC----GRCRQ-ITRIETILEAARSRGIDLNTVAYNSGI 370
Query: 440 ISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
S + G + + ++ M++ + +P+ T N ++ S+ ++++ FE+
Sbjct: 371 KSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFED 423
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/384 (20%), Positives = 153/384 (39%), Gaps = 45/384 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y +L L K G+ A + ML+ L P+ A Y+++ V + + + E ++ +
Sbjct: 328 LTYNAILYGLCKIGKYDRAKDVLIEMLQ-LGLTPNAATYNTLLVEICRRDNILEAQEIFD 386
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M ++ + PDLV +++++ + F+++ +SG+ P
Sbjct: 387 EMSRRG---------------VLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
Y +L+ F G +++A+ M RG Y LC
Sbjct: 432 NVIY------------TILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCK 479
Query: 409 NGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
+ DA ML E ++ R P TFT LI G++D +++F+ M + + +P+
Sbjct: 480 KKMFADADMLFNEMVE--RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDK 537
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T N ++ + + +AKEL+++ R + + PD +Y ++L +
Sbjct: 538 VTYNTLIDGFCKAGEMGRAKELWDDMIRKD-------------IIPDHISYGTVLNGFCS 584
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
+ + M G + + L+ R+G ++ G IP
Sbjct: 585 SGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFS 644
Query: 587 FTEMLIQAIVQSNYEKAVALINAM 610
+ ++ + ++N EKA LIN M
Sbjct: 645 YNTLIDGYLKEANLEKAFILINEM 668
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/381 (18%), Positives = 144/381 (37%), Gaps = 57/381 (14%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
++ L+ +L + G ++AL F M E + PD Y + + G L + +K+ + M
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREM-ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ D+V YN LN + +F ++ + G+ P
Sbjct: 459 LARGCFM---------------DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFY 503
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
T+ L+R + ++G +++A+ M + + Y L C G
Sbjct: 504 TF------------TTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAG 551
Query: 411 R-------WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHC 462
W D + + P I++ ++ G + + +++ Q ++
Sbjct: 552 EMGRAKELWDDMIR--------KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGI 603
Query: 463 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
PN+ T N ++K Y R+ KA +E ++ S+G + PD ++Y+++++
Sbjct: 604 RPNLVTCNTLIKGYCRSGDMPKA---YEYLSKMISNG----------IIPDSFSYNTLID 650
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
E + M G Q + + +L GK E ++E G P
Sbjct: 651 GYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINP 710
Query: 583 HPLFFTEMLIQAIVQSNYEKA 603
++ ++ + Q N ++A
Sbjct: 711 DGATYSSLINGHVSQDNMKEA 731
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 116/288 (40%), Gaps = 37/288 (12%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L +++M A M + G++ L++G G+ +A+++ + +
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
K D + Y L+ KAG A +++ M+ ++ PD +Y +V GLL
Sbjct: 533 LKPD---KVTYNTLIDGFCKAGEMGRAKELWDDMIRK-DIIPDHISYGTVLNGFCSSGLL 588
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E + L ++M +K + P+LV N ++ S + ++
Sbjct: 589 PEALNLCDQMLEKG---------------IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKM 633
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
+G+ P + +Y L+ + +E + +A + ME+RG+ Y
Sbjct: 634 ISNGIIPDSFSY------------NTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYN 681
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
+ C G+ Q+A E++ LR + I G SS+ GH+
Sbjct: 682 LILNGFCAEGKMQEA----EQV--LRKMIEIGINPDGATYSSLINGHV 723
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/487 (18%), Positives = 200/487 (41%), Gaps = 57/487 (11%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E + +++A +L +L R ++ + ++ G+++ E ++ GL G
Sbjct: 12 EAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMAN 71
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
QA+ ++ + G+ + F+Y ++ L +A R +A ++ M+E+ ++ P++ Y
Sbjct: 72 QALELVRELSGVYTP----TLFIYNGIITGLCRASRVMDAYKVLEKMVEE-SIVPNVFTY 126
Query: 268 HSVAVTL---GQVGLLKELVKLIERMRQKPS-----KRIKNMHRKN-WDPVLE------- 311
+ L + L +E+ + ++R KP+ I+++ R D L
Sbjct: 127 TILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRS 186
Query: 312 ----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
D++ ++ + + +++R+ G++P+ TY L
Sbjct: 187 LELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTY------------SNL 234
Query: 368 VRAFWEEGKINEAVAAVRNMEQR-GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
V F + G+++ + + R G A+ Y LC G A VE+ LR
Sbjct: 235 VHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEE---LR 291
Query: 427 HSK--PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFS 483
S P +T++ LI + G D + + + M ++ +P++ T + ++ V + F
Sbjct: 292 QSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQ 351
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
A L E + G+P P+ TY+S+++ + + + VY+ M S
Sbjct: 352 DAFRLLE-----------LMEAAGSP--PNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKS 398
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
C D ++ ++ S+AG F+ + + E P ++ ++ E+A
Sbjct: 399 RCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458
Query: 604 VALINAM 610
+ + M
Sbjct: 459 CGMYHGM 465
>gi|334187948|ref|NP_001190400.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332006093|gb|AED93476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 177/435 (40%), Gaps = 72/435 (16%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG---QVGL 279
R ++SR TKL+ +L + GRPHEA +F + E + P + +Y ++ + Q G
Sbjct: 43 RTVRSR---TKLMNVLIERGRPHEAQTVFKTLAETGH-RPSLISYTTLLAAMTVQKQYGS 98
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ +V +E+ K D + +NAV+NA S + +
Sbjct: 99 ISSIVSEVEQSGTKL------------------DSIFFNAVINAFSESGNMEDAVQALLK 140
Query: 340 LRKSGLKPSAAT-------YGLAMESYRRCLL-------------------KVLVRAFWE 373
+++ GL P+ +T YG+A + R L VLV+A+ +
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-MLVVEKIKSLRHSKPLE 432
+ K+ EA V+ ME+ GV Y +A C G A VVEK+ +KP
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNG 260
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI----GTVNAMLKVYSRNDM------ 481
T ++ G + D + + MK+ E N+ +N ++V R+ +
Sbjct: 261 RTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLT 320
Query: 482 -----FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
F++ EL + T + +K D TYS+++ A ++A E V
Sbjct: 321 LLLMSFNEEVELV-GNQKMKVQVLTLM--KECNVKADVITYSTVMNAWSSAGYMEKAAQV 377
Query: 537 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 596
+K M +G + D ++ L RA + E ++L+ P+ + FT ++
Sbjct: 378 FKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCS 436
Query: 597 QSNYEKAVALINAMA 611
+ + A+ + N M
Sbjct: 437 NGSMDDAMRVFNKMC 451
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 117/272 (43%), Gaps = 45/272 (16%)
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK--PSK 296
+A + EA+ FN+M E +L P++ A++ + L + +++ ++ E MR + P
Sbjct: 144 ARAQKVDEAIYAFNVM-EKYDLPPNLVAFNGLLSALCKSKNVRKAQEIFENMRDRFTPDS 202
Query: 297 RIKNMHRKNW--DPVLE---------------PDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ ++ + W +P L PD+V Y+ +++ + + + +
Sbjct: 203 KTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMVDILCKAGRVDEALGIVRS 262
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ S KP+ Y VLV + E ++ EAV ME+ G+ +V+
Sbjct: 263 MDPSICKPTTFIYS------------VLVHTYGTETRLEEAVDTFLEMERSGMKADVAVF 310
Query: 400 YELACCLCNNGRWQDAMLVVEKIKS---LRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
L C R ++ V++++KS +SK I LI D G D+ +F+
Sbjct: 311 NSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLI----DRGEKDEAFDVFR 366
Query: 457 HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
M CEP+ T M+K MF + KE+
Sbjct: 367 KMIKVCEPDADTYTMMIK------MFCEKKEM 392
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 105/250 (42%), Gaps = 43/250 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+G G + + +A V + D L Y+ ++ IL KAGR EAL I M
Sbjct: 208 LLEGWGKEPNLPKAREVFR---EMVDAGSLPDIVTYSIMVDILCKAGRVDEALGIVRSM- 263
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P Y + T G L+E V M + K D+
Sbjct: 264 DPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMK---------------ADVA 308
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL-------------AMESYRRC 362
V+N+++ A +++ K V+ V K+++ G+ P++ + + A + +R+
Sbjct: 309 VFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGEKDEAFDVFRK- 367
Query: 363 LLKV----------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
++KV +++ F E+ ++ A + M ++GV + + L LC
Sbjct: 368 MIKVCEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEEPNT 427
Query: 413 QDAMLVVEKI 422
Q A +++E++
Sbjct: 428 QKACVLLEEM 437
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 79/195 (40%), Gaps = 32/195 (16%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ F+Y+ L+ G R EA+ F L +E + D+A ++S+ + +K + ++
Sbjct: 271 TTFIYSVLVHTYGTETRLEEAVDTF-LEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRV 329
Query: 287 IERMRQK---PSKRIKNM------HRKNWD----------PVLEPDLVVYNAVLNACVPS 327
++ M+ K P+ + N+ R D V EPD Y ++
Sbjct: 330 LKEMKSKGVTPNSKSCNIILRHLIDRGEKDEAFDVFRKMIKVCEPDADTYTMMIKMFCEK 389
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ + V+K +RK G+ PS T+ VL+ EE +A + M
Sbjct: 390 KEMETADKVWKYMRKKGVFPSMHTFS------------VLINGLCEEPNTQKACVLLEEM 437
Query: 388 EQRGVVGTASVYYEL 402
+ G+ + + + L
Sbjct: 438 IEMGIRPSGATFGRL 452
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 16/148 (10%)
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
P + F GL+ + ++ IF++M+D P+ T + +L+ + + KA+E+F
Sbjct: 166 PNLVAFNGLLSALCKSKNVRKAQEIFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVF 225
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
E A S PD TYS M++ A + + + + M S C+
Sbjct: 226 REMVDAGSL-------------PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTT 272
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLE 577
++ L+ G LE A D+ LE
Sbjct: 273 FIYSVLV---HTYGTETRLEEAVDTFLE 297
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/406 (19%), Positives = 153/406 (37%), Gaps = 50/406 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
++++LL L A R EA I + + PD+ +Y LLK
Sbjct: 130 IFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSI---------LLKGFCN---E 177
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
R + + + +M + D P++V Y V++ + VF+ + G++P+
Sbjct: 178 KRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNN 237
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L+ + GK E V ++ M G+ +Y L LC N
Sbjct: 238 HTY------------TCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKN 285
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG-GHIDDCISIFQHM-KDHCEPNIG 467
GR +A + + + +R +T G+++ G + + S M + P+
Sbjct: 286 GRCTEARNIFDSV--IRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHH 343
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG------------DGAPLK---- 511
N M Y++ M +A +F++ + S G D A LK
Sbjct: 344 IFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQM 403
Query: 512 ------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
PD + +SS++ T +WE E ++ + G +LD L+ R G+
Sbjct: 404 IDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRV 463
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ D +L G P + + ++ + ++A L++ +
Sbjct: 464 MEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIV 509
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/444 (17%), Positives = 173/444 (38%), Gaps = 53/444 (11%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV--YG 218
++D L + +M + + M G+ L+ G G W++ + +L + +G
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHG 267
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
L+ ++Y LL L K GR EA IF+ ++ + P++ Y + G
Sbjct: 268 LQ-----PDCYIYAVLLDYLCKNGRCTEARNIFDSVIRK-GIKPNVTIYGILLHGYATEG 321
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
L E+ ++ M + PD ++N + A +F
Sbjct: 322 SLSEMHSFLDLMVGNG---------------VSPDHHIFNIMFCAYAKKAMIDEAMHIFD 366
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
++R+ L P+ TYG L+ A + G++++AV M G+ V
Sbjct: 367 KMRQQRLSPNIVTYG------------ALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFV 414
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM--DGGHIDDCISIFQ 456
+ L LC +W+ A + ++ L L+ F ++ ++ +G ++ I
Sbjct: 415 FSSLVYGLCTVDKWEKAEELFFEV--LDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDL 472
Query: 457 HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
++ P++ + N ++ + +A +L + LKPD+ T
Sbjct: 473 MLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIG-------------LKPDKVT 519
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
Y+++L A + + +++ M + G D + +L + G+ + + S++
Sbjct: 520 YNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI 579
Query: 577 EAGEIPHPLFFTEMLIQAIVQSNY 600
+ ++ ++I + ++N+
Sbjct: 580 NS-RTQMNIYTYNIIINGLCKNNF 602
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 141/353 (39%), Gaps = 60/353 (16%)
Query: 196 LLKGLGDKGSWRQA----MSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
L+ GL W +A VLD G++ L + F + L+ L + GR EA R+
Sbjct: 418 LVYGLCTVDKWEKAEELFFEVLDQ--GIR----LDTVF-FNTLMCNLCREGRVMEAQRLI 470
Query: 252 NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE 311
+LML + PD+ +Y+++ G + E KL++ + L+
Sbjct: 471 DLMLR-VGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIG---------------LK 514
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD V YN +L+ + + + +F+++ GL P TY ++
Sbjct: 515 PDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTY------------NTILHGL 562
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
++ G+ +EA +M Y + LC N +A + + S L
Sbjct: 563 FQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCS--KDLQL 620
Query: 432 EITFTGLIISS-MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+I ++I + + GG +D + +F + + P++ T + + + + ELF
Sbjct: 621 DIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELF 680
Query: 490 ----EETTRANSSGYTFL------SGD----GAPL-KPDEYTYSSMLEASATA 527
E T NS L GD GA L K DE +S LEAS T+
Sbjct: 681 SAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFS--LEASTTS 731
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/261 (18%), Positives = 106/261 (40%), Gaps = 32/261 (12%)
Query: 338 KQLRKSGLK--PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG-VVG 394
+ +R+ +K PS+ TY +L+ F G++ AA + + G V
Sbjct: 79 RMIRECSIKVAPSSFTY------------TILIGCFCRMGRLKHGFAAFGLILKTGWRVN 126
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
++ +L LC+ R +A ++ + P +++ L+ + ++ + +
Sbjct: 127 DTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALEL 186
Query: 455 FQHMKDHCE----PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 510
M D + PN+ T ++ + M +AK +F+ +
Sbjct: 187 LSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKG-------------V 233
Query: 511 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEH 570
+P+ +TY+ ++ + +W+ + + M+ G Q D +A LL + G+C +
Sbjct: 234 RPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARN 293
Query: 571 AFDSLLEAGEIPHPLFFTEML 591
FDS++ G P+ + +L
Sbjct: 294 IFDSVIRKGIKPNVTIYGILL 314
>gi|255552808|ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543458|gb|EEF44989.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/398 (20%), Positives = 168/398 (42%), Gaps = 63/398 (15%)
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
+ + W++++++LDW+ + R S F Y +L + +A + A +F+ M +
Sbjct: 108 ISQEADWQRSLALLDWINEVA--RYSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRA- 164
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK-------RIKNMHRKNWD----- 307
L PD Y ++ + G+ G+ E + +++M Q + + RK D
Sbjct: 165 LSPDRYTYSTLITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAI 224
Query: 308 --------PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+ PDLV YN+++N + ++ + ++R+ G+ P +Y
Sbjct: 225 SIFMRLKRSGITPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYS------ 278
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
L+ + E K EA++ M + A+ +L C + +V
Sbjct: 279 ------TLLSVYVENEKFVEALSVFAEMNE------ANCSLDLMTCNIMIDVYGQLDMVK 326
Query: 420 EKIK---SLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAML 473
E + S+R +P +++ L+ + + I +F+ M + E N+ T N M+
Sbjct: 327 EADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 386
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
K+Y ++ KA L +E + ++P+ TYS+++ A + +
Sbjct: 387 KIYGKSLEHEKATNLVQEMQKRG-------------IEPNAITYSTIISIWGKAGKLDRA 433
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
+++ + SG ++DQ + ++V RAG L+ HA
Sbjct: 434 AMLFQKLRSSGVEIDQVLYQTMIVAYERAG---LVAHA 468
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/344 (19%), Positives = 135/344 (39%), Gaps = 49/344 (14%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
++ + G+ EA R+F M + P++ +Y+++ G+ L E + L M++K
Sbjct: 315 MIDVYGQLDMVKEADRLFWSM-RKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRK 373
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+E ++V YN ++ S + + + ++++K G++P+A TY
Sbjct: 374 E---------------IEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYS 418
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
++ + + GK++ A + + GV +Y + ++
Sbjct: 419 ------------TIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVA------YE 460
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDHCE-PNIGTVNA 471
A LV + L K +I I + G I++ +F+ D E +I
Sbjct: 461 RAGLVAHAKRLLHDLKCPDIIPRDTAIKILARAGRIEEATWVFRQAFDAGEVKDISVFRC 520
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
M++++SRN + E+FE+ GA PD + +L A ++E
Sbjct: 521 MIELFSRNKRPANVVEVFEKMR-------------GAGYFPDSDVIALVLNAYGKLREFE 567
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
+ VY+ M C H +L ++E F+ L
Sbjct: 568 KADAVYREMQEEECVFPDEVHFQMLSLYGARKDFIMVESLFEKL 611
>gi|15242530|ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product [Arabidopsis thaliana]
gi|332007115|gb|AED94498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 169/399 (42%), Gaps = 65/399 (16%)
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
L + W++++++LDWV+ ++ + S F Y +L + +A + A +F+ M +
Sbjct: 129 LSRENDWQRSLALLDWVH--EEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRA- 185
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP---------------------SKRI 298
L PD Y ++ + G+ G+ + +++M Q SK I
Sbjct: 186 LAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAI 245
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
R + PDLV YN+++N + ++ + K++ ++G+ P+ +Y
Sbjct: 246 SIFSRLKRSGI-TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYS----- 299
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
L+ + E K EA++ M++ + +L C + +V
Sbjct: 300 -------TLLSVYVENHKFLEALSVFAEMKE------VNCALDLTTCNIMIDVYGQLDMV 346
Query: 419 VEKIK---SLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAM 472
E + SLR +P +++ ++ + + I +F+ M + E N+ T N M
Sbjct: 347 KEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTM 406
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
+K+Y + KA L +E S G ++P+ TYS+++ A + +
Sbjct: 407 IKIYGKTMEHEKATNLVQEM---QSRG----------IEPNAITYSTIISIWGKAGKLDR 453
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
+++ + SG ++DQ + ++V R G L+ HA
Sbjct: 454 AATLFQKLRSSGVEIDQVLYQTMIVAYERVG---LMGHA 489
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/400 (19%), Positives = 161/400 (40%), Gaps = 50/400 (12%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
++ MN++G++ LL + + +A+SV + + DL + + ++
Sbjct: 282 LIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNI---MID 338
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
+ G+ EA R+F L ++ P++ +Y+++ G+ L E + L M++K
Sbjct: 339 VYGQLDMVKEADRLF-WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD-- 395
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+E ++V YN ++ + + + + ++++ G++P+A TY
Sbjct: 396 -------------IEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYS--- 439
Query: 357 ESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
++ + + GK++ A + + GV +Y + G A
Sbjct: 440 ---------TIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAK 490
Query: 417 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKV 475
++ ++K L + P E T L G ++ +F+ + E +I M+ +
Sbjct: 491 RLLHELK-LPDNIPRETAITIL----AKAGRTEEATWVFRQAFESGEVKDISVFGCMINL 545
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
YSRN + E+FE + ++GY PD + +L A ++E +
Sbjct: 546 YSRNQRYVNVIEVFE---KMRTAGYF----------PDSNVIAMVLNAYGKQREFEKADT 592
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
VY+ M GC H +L S ++E F L
Sbjct: 593 VYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRL 632
>gi|356540373|ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 881
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 142/342 (41%), Gaps = 34/342 (9%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
WRS+ E ++ +D W + M Q G K++ D G W++A+
Sbjct: 186 WRSK-ETYQIFLDYYVGAGRLEDTWSTINEMKQKGFPLNSFMYSKVVGIYRDNGMWKKAI 244
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
VL+ + +++ + ++ GK G EAL++F M ++ + P+I ++S+
Sbjct: 245 EVLEEI---RERGISLDTHICNSIIDTFGKYGELDEALKLFKKMQKE-GVRPNIVTWNSL 300
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
+ G + L M+++ L PD ++ +++ +W
Sbjct: 301 IKWHCKEGDFMKAFHLFTDMQEQG---------------LYPDPKIFVTIISCLGEQGKW 345
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
+ F+ ++ G K A Y VLV + + GK A V+ ++
Sbjct: 346 DIIKKYFESMKIRGNKEYGAVYA------------VLVDIYGQYGKFQNAGECVQALKSE 393
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD 450
GV+ + S++ LA G + ++V++ I +P + LI + + G +
Sbjct: 394 GVLVSPSIFCVLANAYAQQGLCEQVIMVLQ-IMEAEGIEPNIVMLNMLINAFGNAGRYME 452
Query: 451 CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
IS++ H+K+ P++ T ++K + R F + +++E
Sbjct: 453 AISVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEVPIIYKE 494
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 125/302 (41%), Gaps = 29/302 (9%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+P L +Y+++L + V K++ G+ S TY + ++ Y V A
Sbjct: 151 KPKLNLYHSLLRGFLKKGLLGLANGVLKEMDDLGIWRSKETYQIFLDYY--------VGA 202
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
G++ + + + M+Q+G + +Y ++ +NG W+ A+ V+E+I+
Sbjct: 203 ----GRLEDTWSTINEMKQKGFPLNSFMYSKVVGIYRDNGMWKKAIEVLEEIR--ERGIS 256
Query: 431 LEITFTGLIISSMDG-GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
L+ II + G +D+ + +F+ M K+ PNI T N+++K + + F KA L
Sbjct: 257 LDTHICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHL 316
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F + L PD + +++ +W+ + ++ M + G +
Sbjct: 317 FTDMQEQG-------------LYPDPKIFVTIISCLGEQGKWDIIKKYFESMKIRGNKEY 363
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+A L+ + GK +L G + P F + Q E+ + ++
Sbjct: 364 GAVYAVLVDIYGQYGKFQNAGECVQALKSEGVLVSPSIFCVLANAYAQQGLCEQVIMVLQ 423
Query: 609 AM 610
M
Sbjct: 424 IM 425
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 88/212 (41%), Gaps = 33/212 (15%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M + GL + ++ LG++G W + + +K + + + VY L+ I G+
Sbjct: 320 MQEQGLYPDPKIFVTIISCLGEQGKWD---IIKKYFESMKIRGNKEYGAVYAVLVDIYGQ 376
Query: 241 AGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
G+ A L E + P I + +A Q GL ++++ +++ M +
Sbjct: 377 YGKFQNAGECVQALKSEGVLVSPSI--FCVLANAYAQQGLCEQVIMVLQIMEAEG----- 429
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+EP++V+ N ++NA + ++ V+ +++SG+ P TY
Sbjct: 430 ----------IEPNIVMLNMLINAFGNAGRYMEAISVYHHIKESGVSPDVVTY------- 472
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
L++AF K +E + ME G
Sbjct: 473 -----TTLMKAFIRAKKFDEVPIIYKEMENDG 499
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/447 (19%), Positives = 170/447 (38%), Gaps = 60/447 (13%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYP 262
G RQA +L + RD F Y L+ +AG+ HE L D C L
Sbjct: 210 GMLRQARRLLHHMTAHACARD---AFTYGILVNAHCRAGQMHEVASFMELARHDGCAL-- 264
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
Y+ + + G L E +L E K S PD+ YN ++
Sbjct: 265 SAVNYNFIIQGFIRCGRLAEATQLFESTMTKESV---------------PDVFTYNLLIA 309
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR------------------CL- 363
C S Q + +F++ + G+ TY M+++ + C+
Sbjct: 310 LC-KSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMP 368
Query: 364 ----LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
VL+ ++GK++EA+ + +M ++G++ Y + L + GR++ A
Sbjct: 369 DTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFF 428
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSR 478
+K +HS P +T+ L+ D+ +F M+ + C P++ T ++ ++
Sbjct: 429 GMMKRRKHS-PDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAK 487
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
+ ++ E++ R G+ P+ Y Y++++ + Q + +++
Sbjct: 488 A---GRMEDALEQSARLVKMGHA----------PNSYIYNALISGFCRSGQVDKGYELFQ 534
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
M C D + L++ SR G + ++ G P + ++ +
Sbjct: 535 DMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAG 594
Query: 599 NYEKAVALINAMAYAPFHITERQWTEL 625
E A L M F+ + ++ L
Sbjct: 595 QVEDAYTLFKEMIAKGFNPDMQTYSAL 621
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/437 (18%), Positives = 160/437 (36%), Gaps = 60/437 (13%)
Query: 183 QSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV------YTKLLA 236
Q G+ +E + ++ G G AM +LD D R + F +T +
Sbjct: 46 QKGVGLSEVTCTECIQAFGRAGDLDAAMGMLD------DMR--RGNFCQPDTVAFTAAMH 97
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
L + R +A+ +F+ M E C+ PD+ AY+++ + G + + R++Q+ S
Sbjct: 98 WLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGS- 156
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+P+ V ++ ++ + VF+++ +GLK
Sbjct: 157 -------------CKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVN------ 197
Query: 357 ESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
+ L+ G + +A + +M A Y L C G+ +
Sbjct: 198 ------VCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHE-- 249
Query: 417 LVVEKIKSLRHSKPL--EITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAML 473
V ++ RH + + +I + G + + +F+ M P++ T N +L
Sbjct: 250 -VASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYN-LL 307
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
++ +A LF+E A G D +TYS +++A A +
Sbjct: 308 IALCKSKQLEEALTLFQE---AEQGGVVL----------DVFTYSYLMDAFGKAGRAAKA 354
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 593
V+ M +GC D + L+ + GK + + G +P + ++
Sbjct: 355 LEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDV 414
Query: 594 AIVQSNYEKAVALINAM 610
YEKA + M
Sbjct: 415 LSSCGRYEKAYSFFGMM 431
>gi|30688764|ref|NP_850356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
gi|20268762|gb|AAM14084.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|21436141|gb|AAM51317.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254931|gb|AEC10025.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 132/295 (44%), Gaps = 45/295 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT LL G++ +P +A +F LM+ P++ Y+++ G G L E V++ +M
Sbjct: 393 YTCLLNSYGRSRQPGKAKEVF-LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 451
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q ++P++V +L AC S + V V + G+ + A
Sbjct: 452 EQDG---------------IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 496
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
Y A+ SY ++ +A+A ++M ++ V + + L C
Sbjct: 497 AYNSAIGSY------------INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 544
Query: 411 RWQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGT 468
++ +A+ +++++ L S PL + ++ ++ + G + + SIF MK CEP++
Sbjct: 545 KYPEAISYLKEMEDL--SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIA 602
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+ML Y+ ++ + KA ELF E + +G ++PD S+++ A
Sbjct: 603 YTSMLHAYNASEKWGKACELFLE-----------MEANG--IEPDSIACSALMRA 644
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 110/502 (21%), Positives = 188/502 (37%), Gaps = 102/502 (20%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH-EALRIFNLM 254
L+ G G+WR+A+ V + DL V ++ K+GR + +AL F LM
Sbjct: 219 LINACGSSGNWREALEVCKKMTDNGVGPDL----VTHNIVLSAYKSGRQYSKALSYFELM 274
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK---------RIKNMHR-- 303
+ + PD ++ + L ++G + + L MR+K ++ I +++
Sbjct: 275 -KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVK 333
Query: 304 ---KNWDPVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+N V E P++V YNA++ A V ++++G+ P +Y
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 393
Query: 353 GLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+ SY R L+ A+ G + EAV R MEQ
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 390 RGV-VGTASVYYELACCL---------------------CNNGRWQDAM------LVVEK 421
G+ SV LA C N + A+ +EK
Sbjct: 454 DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEK 513
Query: 422 IKSLRHS------KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV-NAMLK 474
+L S K +TFT LI S + IS + M+D P V +++L
Sbjct: 514 AIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLC 573
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
YS+ ++A+ +F + A +PD Y+SML A + +W
Sbjct: 574 AYSKQGQVTEAESIFNQMKMAGC-------------EPDVIAYTSMLHAYNASEKWGKAC 620
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP-LFFTEMLIQ 593
++ M +G + D + L+ ++ G+ + D L+ EIP F E+
Sbjct: 621 ELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD-LMREKEIPFTGAVFFEIFSA 679
Query: 594 AIVQSNYEKAVALINAM-AYAP 614
+++A+ LI M Y P
Sbjct: 680 CNTLQEWKRAIDLIQMMDPYLP 701
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 88/475 (18%), Positives = 190/475 (40%), Gaps = 57/475 (12%)
Query: 162 VDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
V + +R M W+ V ++N F L++ L +G ++V W +K
Sbjct: 78 VSEVVDRLMALNRWEEVDGVLNSWVGRFARKNFPVLIRELSRRGCIELCVNVFKW---MK 134
Query: 221 DKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+++ +R +Y ++ + + +A +F ++ + PD Y ++ G+ G
Sbjct: 135 IQKNYCARNDIYNMMIRLHARHNWVDQARGLF-FEMQKWSCKPDAETYDALINAHGRAGQ 193
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ + L++ M + + P YN ++NAC S W+ V K+
Sbjct: 194 WRWAMNLMDDMLR---------------AAIAPSRSTYNNLINACGSSGNWREALEVCKK 238
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ +G+ P T+ + + +Y+ + ++A++ M+ V + +
Sbjct: 239 MTDNGVGPDLVTHNIVLSAYK------------SGRQYSKALSYFELMKGAKVRPDTTTF 286
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLR-HSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
+ CL G+ A+ + ++ R +P +TFT ++ G I++C ++F+ M
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 459 -KDHCEPNIGTVNAMLKVYSRNDMFSKA-------------KELFEETTRANSSGYTFLS 504
+ +PNI + NA++ Y+ + M A ++ T NS G +
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406
Query: 505 GDGAPL---------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
G + KP+ TY+++++A + +++ M G + + L
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 466
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L SR+ K ++ + G + + + I + EKA+AL +M
Sbjct: 467 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 521
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 54/280 (19%), Positives = 101/280 (36%), Gaps = 65/280 (23%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
EPD++ Y ++L+A S +W +F ++ +G++P + L+RA
Sbjct: 597 EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIA------------CSALMRA 644
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
F + G+ + + M ++ + T +V++E+ W+ A
Sbjct: 645 FNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRA--------------- 689
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKELF 489
I + Q M + +IG N ML ++ ++ +LF
Sbjct: 690 ---------------------IDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLF 728
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
+ SG G LK TY+ +LE W + V + M+ +G Q
Sbjct: 729 YK---------IIASGVGINLK----TYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSN 775
Query: 550 TKHAWLLVEASRAGKCH---LLEHAFDSLLEAGEIPHPLF 586
+ ++ R+ L+ +SL GE P F
Sbjct: 776 QMYRDIISFGERSAGIEFEPLIRQKLESLRNKGEGLIPTF 815
>gi|15219274|ref|NP_175740.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192173|sp|Q9MAG8.1|PPR79_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g53330
gi|7769859|gb|AAF69537.1|AC008007_12 F12M16.23 [Arabidopsis thaliana]
gi|332194805|gb|AEE32926.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 471
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 134/337 (39%), Gaps = 51/337 (15%)
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D R + + ++ ++ G+ P AL +F+ M P +V + L
Sbjct: 76 DTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEM-------PQYRCQRTVKSLNSLLSAL 128
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+ +L E+M+++ S + D +PD YN +++ C S + +F ++
Sbjct: 129 LKCGEL-EKMKERLS---------SIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEM 178
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM-EQRGVVGTASVY 399
K +KP+ T+G L+ ++ ++ EA+ +M + GV T +Y
Sbjct: 179 VKKKVKPTGVTFG------------TLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIY 226
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI---TFTGLIISSMDGGHIDDCISIFQ 456
L LC G A K+K + +++ ++ LI S + G ++ I +
Sbjct: 227 ASLIKALCQIGELSFAF----KLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILE 282
Query: 457 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
M + C+P+ T N ++ + + A + +E LKPD
Sbjct: 283 EMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKG-------------LKPDVI 329
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
+Y+ +L +WE Y+++ M GC D +
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSY 366
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 103/259 (39%), Gaps = 45/259 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K L G A + D Y K K D +Y+ L++ L KAGR +E I M
Sbjct: 229 LIKALCQIGELSFAFKLKDEAYEGKIKVDAA---IYSTLISSLIKAGRSNEVSMILEEMS 285
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E PD Y+ + +E + ++ + M K L+PD++
Sbjct: 286 EK-GCKPDTVTYNVLINGF-----------CVENDSESANRVLDEMVEKG----LKPDVI 329
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY---------GLAMESY------- 359
YN +L +W+ ++F+ + + G P +Y GL E
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Query: 360 -------RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
RR L+ ++ E GK+ E ++ V + RG+ G A V+ + +C
Sbjct: 390 LFKGYKPRRDRLEGFLQKLCESGKL-EILSKVISSLHRGIAGDADVWSVMIPTMCKEPVI 448
Query: 413 QDAMLVVEKIKSLRHSKPL 431
D++ ++ + +++ PL
Sbjct: 449 SDSIDLL--LNTVKEDGPL 465
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 116/275 (42%), Gaps = 42/275 (15%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
AG+P +A+++F L + + + D+A+++++ L + +++ +L +R + S
Sbjct: 133 AGKPDKAVKLF-LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV---- 187
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY- 359
D V YN +LN + V K++ + G+ P+ TY ++ +
Sbjct: 188 ------------DTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFF 235
Query: 360 -----------------RRCLLKVL-----VRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
R C + V+ V F G+I A M + GV+ + +
Sbjct: 236 RAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 295
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y + LC ++A+++ E++ R +P T+ LI G + Q
Sbjct: 296 TYNAMIQVLCKKDNVENAVVMFEEMVR-RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 354
Query: 458 MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
M++ CEPN T N M++ YS KA LFE+
Sbjct: 355 MENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK 389
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 116/297 (39%), Gaps = 41/297 (13%)
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 476
++ +++SLR P TF + G D + +F +M +H C ++ + N +L V
Sbjct: 107 LIHRMRSLRIG-PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 165
Query: 477 SRNDMFSKAKELFE--------ETTRANS--SGYTFLSGDGAPLK-----------PDEY 515
++ KA ELF +T N +G+ + L+ P+
Sbjct: 166 CKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLT 225
Query: 516 TYSSMLE----ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
TY++ML+ A H WE+F + K C++D + ++ AG+ +
Sbjct: 226 TYNTMLKGFFRAGQIRHAWEFFLEMKK----RDCEIDVVTYTTVVHGFGVAGEIKRARNV 281
Query: 572 FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTE-LFE 627
FD ++ G +P + M+ + N E AV + M Y P T LF
Sbjct: 282 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 341
Query: 628 SNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGS 684
+ E + ++++ N C N + + + S SE E+ L GS
Sbjct: 342 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSEC------SEVEKALGLFEKMGS 392
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK-DKRDLKSRF 229
T K + ++ M + G+ +LKG G R A W + L+ KRD +
Sbjct: 205 TPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA-----WEFFLEMKKRDCEIDV 259
Query: 230 V-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
V YT ++ G AG A +F+ M+ + + P +A Y+++ L + ++ V + E
Sbjct: 260 VTYTTVVHGFGVAGEIKRARNVFDEMIRE-GVLPSVATYNAMIQVLCKKDNVENAVVMFE 318
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M ++ EP++ YN ++ + ++ + +++ G +P+
Sbjct: 319 EMVRRG---------------YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 363
Query: 349 AATYGLAMESYRRC 362
TY + + Y C
Sbjct: 364 FQTYNMMIRYYSEC 377
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/384 (20%), Positives = 153/384 (39%), Gaps = 45/384 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y +L L K G+ A + ML+ L P+ A Y+++ V + + + E ++ +
Sbjct: 328 LTYNAILYGLCKIGKYDRAKDVLIEMLQ-LGLTPNAATYNTLLVEICRRDNILEAQEIFD 386
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M ++ + PDLV +++++ + F+++ +SG+ P
Sbjct: 387 EMSRRG---------------VLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
Y +L+ F G +++A+ M RG Y LC
Sbjct: 432 NVIY------------TILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCK 479
Query: 409 NGRWQDA-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
+ DA ML E ++ R P TFT LI G++D +++F+ M + + +P+
Sbjct: 480 KKMFADADMLFNEMVE--RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDK 537
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T N ++ + + +AKEL+++ R + + PD +Y ++L +
Sbjct: 538 VTYNTLIDGFCKAGEMGRAKELWDDMIRKD-------------IIPDHISYGTVLNGFCS 584
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
+ + M G + + L+ R+G ++ G IP
Sbjct: 585 SGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFS 644
Query: 587 FTEMLIQAIVQSNYEKAVALINAM 610
+ ++ + ++N EKA LIN M
Sbjct: 645 YNTLIDGYLKEANLEKAFILINEM 668
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/381 (18%), Positives = 144/381 (37%), Gaps = 57/381 (14%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
++ L+ +L + G ++AL F M E + PD Y + + G L + +K+ + M
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREM-ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ D+V YN LN + +F ++ + G+ P
Sbjct: 459 LARGCFM---------------DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFY 503
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
T+ L+R + ++G +++A+ M + + Y L C G
Sbjct: 504 TF------------TTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAG 551
Query: 411 R-------WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHC 462
W D + + P I++ ++ G + + +++ Q ++
Sbjct: 552 EMGRAKELWDDMIR--------KDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGI 603
Query: 463 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
PN+ T N ++K Y R+ KA +E ++ S+G + PD ++Y+++++
Sbjct: 604 RPNLVTCNTLIKGYCRSGDMPKA---YEYLSKMISNG----------IIPDSFSYNTLID 650
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
E + M G Q + + +L GK E ++E G P
Sbjct: 651 GYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINP 710
Query: 583 HPLFFTEMLIQAIVQSNYEKA 603
++ ++ + Q N ++A
Sbjct: 711 DGATYSSLINGHVSQDNMKEA 731
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 116/288 (40%), Gaps = 37/288 (12%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
++ L +++M A M + G++ L++G G+ +A+++ + +
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
K D + Y L+ KAG A +++ M+ ++ PD +Y +V GLL
Sbjct: 533 LKPD---KVTYNTLIDGFCKAGEMGRAKELWDDMIRK-DIIPDHISYGTVLNGFCSSGLL 588
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E + L ++M +K + P+LV N ++ S + ++
Sbjct: 589 PEALNLCDQMLEKG---------------IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKM 633
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
+G+ P + +Y L+ + +E + +A + ME+RG+ Y
Sbjct: 634 ISNGIIPDSFSY------------NTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYN 681
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
+ C G+ Q+A E++ LR + I G SS+ GH+
Sbjct: 682 LILNGFCAEGKMQEA----EQV--LRKMIEIGINPDGATYSSLINGHV 723
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 98/492 (19%), Positives = 189/492 (38%), Gaps = 104/492 (21%)
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
+FT G ++K L + + S A+SVL + + + +Y L+ L K R +E
Sbjct: 211 LFTFGVVMKALCAVNEVDS---ALSVLR---DMTKHGCVPNSVIYQTLIHSLSKCNRVNE 264
Query: 247 ALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
AL++ + L C PD ++ V + L + + E K++ RM +
Sbjct: 265 ALQLLEEMFLMGC--VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG----------- 311
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
PD + Y ++N + +F ++ K P++ +
Sbjct: 312 ----FTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSVIF------------N 351
Query: 366 VLVRAFWEEGKINEAVAAVRNM-EQRGVVGTASVYYELACCLCNNGRWQDAM--LVVEKI 422
L+ F G++++A A + +M G+V Y L G W+ + L +E +
Sbjct: 352 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI-----YGYWKKGLVGLALEVL 406
Query: 423 KSLRH--SKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRN 479
+ +R+ KP ++T L+ G ID+ ++ M D +PN N ++ + +
Sbjct: 407 RDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKE 466
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
+A E+F E R KPD YT++S++
Sbjct: 467 HRIPEAVEIFREMPRKGC-------------KPDVYTFNSLISGL--------------- 498
Query: 540 MALSGCQLDQTKHA-WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
C++D+ KHA WLL + ++ G + + + + ++ + +
Sbjct: 499 -----CEVDEIKHALWLLRD----------------MISEGVVANTVTYNTLINAFLRRG 537
Query: 599 NYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVS 658
++A L+N M + + E + L + DK L + S I+ +
Sbjct: 538 EIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCN 597
Query: 659 NLSRALHALCRS 670
L ++ LCRS
Sbjct: 598 IL---INGLCRS 606
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/388 (20%), Positives = 156/388 (40%), Gaps = 48/388 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
++ L+ GR +A + + M+ + PD+ Y+S+ + GL+ ++++
Sbjct: 349 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRD 408
Query: 290 MRQKPSK--------------------RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
MR K K N+ + L+P+ V +N +++A H+
Sbjct: 409 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHR 468
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+F+++ + G KP T+ L+ E +I A+ +R+M
Sbjct: 469 IPEAVEIFREMPRKGCKPDVYTF------------NSLISGLCEVDEIKHALWLLRDMIS 516
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
GVV Y L G ++A +V ++ + S EIT+ LI G +D
Sbjct: 517 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEM-VFQGSLLDEITYNSLIKGLCRAGEVD 575
Query: 450 DCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
S+F+ M +D P+ + N ++ R+ M +A E +E S+
Sbjct: 576 KARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGST---------- 625
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
PD T++S++ A + E +++ + G D + L+ + G +
Sbjct: 626 ---PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDA 682
Query: 569 EHAFDSLLEAGEIPHPLFFTEMLIQAIV 596
D +E G +P+ ++ +L+Q++V
Sbjct: 683 CLLLDEGIEDGFVPNDRTWS-ILLQSLV 709
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 90/226 (39%), Gaps = 28/226 (12%)
Query: 147 PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
P K + + L+ L E + +R M G++ L+ +G
Sbjct: 480 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 539
Query: 207 RQAMSVLD-WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
++A +++ V+ + L Y L+ L +AG +A +F ML D L P
Sbjct: 540 KEARKLVNEMVF----QGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD-GLVPSSI 594
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
+ + + L + G+++E V+ + M + S PD+V +N+++N
Sbjct: 595 SCNILINGLCRSGMVEEAVEFQKEMVLRGST---------------PDIVTFNSLINGLC 639
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAME-------SYRRCLL 364
+ + + +F++L+ G+ P TY M Y CLL
Sbjct: 640 RAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLL 685
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 158/393 (40%), Gaps = 58/393 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
++ L+ GR +A + + M+ + PD+ Y+S+ + GL+ ++++
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 290 MRQKPSK--------------------RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
MR K K N+ + L+P+ V +N +++A H+
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+F+++ + G KP T+ L+ E +I A+ +R+M
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTF------------NSLISGLCEVDEIKHALWLLRDMIS 522
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMDGGHI 448
GVV Y L G ++A +V ++ + PL EIT+ LI G +
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEM--VFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 449 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
D S+F+ M +D P+ + N ++ R+ M +A E +E S+
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST--------- 631
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD----QTKHAWLLVEASRAG 563
PD T++S++ A + E +++ + G D T +WL
Sbjct: 632 ----PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Query: 564 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 596
C LL+ +E G +P+ ++ +L+Q+I+
Sbjct: 688 ACLLLDEG----IEDGFVPNHRTWS-ILLQSII 715
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 110/534 (20%), Positives = 197/534 (36%), Gaps = 97/534 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ LG G ++ +L +KD+ + ++ ++ KAG P + R LML
Sbjct: 117 LIGKLGANGEFKTIDRLL---IQMKDEGIVFKESLFISIMRDYDKAGFPGQTTR---LML 170
Query: 256 EDCNLY---PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEP 312
E N+Y P +Y+ V L K + M + RK + P
Sbjct: 171 EMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDM----------LSRK-----IPP 215
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-----LLKVL 367
L + V+ A ++ + + + K G P++ Y + S +C L++L
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275
Query: 368 ------------------VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+ + +INEA V M RG Y L LC
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI 335
Query: 410 GRWQDAMLVVEKIKSL--RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH--CEPN 465
GR V+ K L R KP + F LI + G +DD ++ M P+
Sbjct: 336 GR-------VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFL------------------ 503
+ T N+++ Y + + A E+ + + N YT L
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 504 --SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
S DG LKP+ ++ ++ A H+ +++ M GC+ D L+
Sbjct: 449 EMSADG--LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI----- 501
Query: 562 AGKCHL--LEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 616
+G C + ++HA ++ G + + + + ++ + + ++A L+N M +
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Query: 617 ITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRS 670
+ E + L + DK L + A S I+ + L ++ LCRS
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL---INGLCRS 612
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/487 (18%), Positives = 202/487 (41%), Gaps = 57/487 (11%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E + +++A +L +L R ++ + ++ G+++ E ++ GL G
Sbjct: 12 EAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMAN 71
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
QA+ ++ + G+ + F+Y ++ L +A R +A ++ M+E+ ++ P++ Y
Sbjct: 72 QALELVRELSGVYTP----TVFIYNGIITGLCRASRVMDAYKVLEKMVEE-SIVPNVFTY 126
Query: 268 HSVAVTL---GQVGLLKELVKLIERMRQKPS-----KRIKNMHRKN-WDPVLE------- 311
+ L + L +E+ + ++R KP+ I+++ R D L
Sbjct: 127 TILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRS 186
Query: 312 ----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-CLLKV 366
D++ ++ + + +++R+ G++P+ TY + +R+ L
Sbjct: 187 LELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDR 246
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
++R F EE ++G A+ Y LC G A VE+ LR
Sbjct: 247 VIRFFEEEKA------------RKGGSLEAAAYPGYLDALCKAGYLDRARKSVEE---LR 291
Query: 427 HSK--PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFS 483
S P +T++ LI + G D + + + M ++ +P++ T + ++ V + F
Sbjct: 292 QSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQ 351
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
A L E + G+P P+ TY+S+++ + + + VY+ M S
Sbjct: 352 DAFRLLE-----------LMEAAGSP--PNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKS 398
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
C D ++ ++ S+AG F+ + + E P ++ ++ E+A
Sbjct: 399 RCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458
Query: 604 VALINAM 610
+ + M
Sbjct: 459 CGMYHGM 465
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 145/353 (41%), Gaps = 44/353 (12%)
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
L P I + ++ LG+VG + V+L + M + +PD Y
Sbjct: 41 LQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGC---------------QPDDYTYTT 85
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
++N + +FK++ ++G + + TY L+ + + ++NE
Sbjct: 86 IINGLCKIGETALAAGLFKKMEEAGCQLNVVTY------------STLIHSLCKYRRVNE 133
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
A+ M+ + + T Y L LCN RW++A ++ ++ SL + P +TF L+
Sbjct: 134 ALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSL-NIMPNVVTFNVLV 192
Query: 440 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
+ G + + + M + EP++ T N+++ YS +A++LF+
Sbjct: 193 DTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGC- 251
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
KPD ++YS ++ A + + + ++ M G + + L+
Sbjct: 252 ------------KPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHG 299
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAM 610
+ G+ + F ++ G +P+ L+ +L+ + Y KA L AM
Sbjct: 300 LCQLGRLREAQDLFKNMHTNGNLPN-LYTYAILLDGFCKQGYLGKAFRLFRAM 351
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 33/183 (18%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y+ L+ KA R EA ++FN M+ + P+ +Y+++ L Q+G L+E L +
Sbjct: 256 FSYSILINGYCKAKRIDEAKQLFNEMIHQGST-PNNVSYNTLIHGLCQLGRLREAQDLFK 314
Query: 289 RM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
M +Q + + R L+P+LV+YN ++NA S
Sbjct: 315 NMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSG 374
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
K +F +L GL+P+ Y ++ +EG ++EA+ A RNME
Sbjct: 375 NLKDARELFSELFVIGLQPNVQIY------------TTIINGLCKEGLLDEALEAFRNME 422
Query: 389 QRG 391
G
Sbjct: 423 DDG 425
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 129/345 (37%), Gaps = 75/345 (21%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L+ L K R +EAL IF+ M ++ P I Y S+ L KE L+ M
Sbjct: 118 YSTLIHSLCKYRRVNEALDIFSYMKAK-DISPTIFTYTSLIQGLCNFSRWKEASALLNEM 176
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ P++V +N +++ + V K + + G++P
Sbjct: 177 TSLN---------------IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVV 221
Query: 351 TYGLAMESYR--------RCLLKV---------------LVRAFWEEGKINEAVAAVRNM 387
TY M Y R L V L+ + + +I+EA M
Sbjct: 222 TYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEM 281
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG-- 445
+G Y L LC GR ++A + K++ + L +T I+ +DG
Sbjct: 282 IHQGSTPNNVSYNTLIHGLCQLGRLREAQ---DLFKNMHTNGNLPNLYTYAIL--LDGFC 336
Query: 446 --GHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE----------- 491
G++ +F+ M+ + +PN+ N ++ ++ A+ELF E
Sbjct: 337 KQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQ 396
Query: 492 --TTRANS-----------SGYTFLSGDGAPLKPDEYTYSSMLEA 523
TT N + + DG P PDE++Y+ ++
Sbjct: 397 IYTTIINGLCKEGLLDEALEAFRNMEDDGCP--PDEFSYNVIIRG 439
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 133/317 (41%), Gaps = 38/317 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL + W++A ++L+ + L ++ + + L+ K G+ A + M
Sbjct: 156 LIQGLCNFSRWKEASALLNEMTSLNIMPNVVT---FNVLVDTFCKEGKVLAAEGVLKTMT 212
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK-----------------PSKRI 298
E + PD+ Y+S+ + E KL + M K +KRI
Sbjct: 213 E-MGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRI 271
Query: 299 ---KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
K + + P+ V YN +++ + + +FK + +G P+ TY
Sbjct: 272 DEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYA-- 329
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+L+ F ++G + +A R M+ + +Y L +C +G +DA
Sbjct: 330 ----------ILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDA 379
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 474
+ ++ + ++I +T +I G +D+ + F++M+D C P+ + N +++
Sbjct: 380 RELFSELFVIGLQPNVQI-YTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIR 438
Query: 475 VYSRNDMFSKAKELFEE 491
+ ++ S+A L E
Sbjct: 439 GFLQHKDESRAVHLIGE 455
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 169/450 (37%), Gaps = 82/450 (18%)
Query: 203 KGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
+GS + +D ++G + R SR+ R + M+E + P
Sbjct: 144 RGSVCNLVVYIDCIFGFCEARCQSSRY-----------------ECRDGDEMIESGRI-P 185
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D+ Y++ L + G L + ++++E M + + PD+V + ++++
Sbjct: 186 DVVTYNTFISGLCKAGKLDKGLEMLEEMDRGG---------------IPPDVVTFCSIIS 230
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR--------------------C 362
+++ F VFK + + G P + TY + +++ R C
Sbjct: 231 GLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGC 290
Query: 363 LLKV-----LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
+++V + A GK A + M + G + Y + LC +G DA
Sbjct: 291 VMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWK 350
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK--DHCEPNIGTVNAMLKV 475
+ K+ KP I F LI G + + MK + C P++ T N ++
Sbjct: 351 LSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDG 410
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
S+ +AK L +E KP+ TY++++ A +E E
Sbjct: 411 QSKFGSLKQAKLLLQEMQAVGC-------------KPNVVTYAALINGYAKHGMYEEAES 457
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT-EMLIQA 594
++ M+ GC D + +L S+AG E + L P T +LI
Sbjct: 458 LFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDG 517
Query: 595 IVQS-NYEKAVALINAMAYAPFHITERQWT 623
++ + E+ + L+ M T R W+
Sbjct: 518 YCRAEDTEQGLTLLQEM-------TARGWS 540
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 157/391 (40%), Gaps = 76/391 (19%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S YT L+ L K+G A + M D P++ Y + L+ L K
Sbjct: 9 SVVTYTTLIDGLCKSGDLDAAQALLQKM-ADAGCAPNVVTYTA---------LIDGLCK- 57
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
R + +K M R EPDLV YN++++ +++ V ++L ++G
Sbjct: 58 -ARRPHDAIQTVKRMLRSGC----EPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFA 112
Query: 347 PSAATYG-LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
P+ TY L + + RR ++++A +R M RG V VY + C
Sbjct: 113 PNHITYSTLVIWNCRR-------------RRLDQARGLIREMILRGSVCNLVVYID---C 156
Query: 406 L-------CNNGRWQ----DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
+ C + R++ D M+ +I P +T+ I G +D + +
Sbjct: 157 IFGFCEARCQSSRYECRDGDEMIESGRI-------PDVVTYNTFISGLCKAGKLDKGLEM 209
Query: 455 FQHM-KDHCEPNIGT----VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
+ M + P++ T ++ + K +D F K + E
Sbjct: 210 LEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGC---------------- 253
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL--SGCQLDQTKHAWLLVEASRAGKCHL 567
PD TYS ML+ + A++ + + V + M +GC ++ H + R+GK L
Sbjct: 254 -VPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPL 312
Query: 568 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
++ ++E+G +P+ L + +I + +S
Sbjct: 313 AKNILLGMIESGSLPNLLSY-NFVIDGLCKS 342
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 143/354 (40%), Gaps = 50/354 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+ +++ L KA R +A ++F MLE PD Y + L + L + +++E
Sbjct: 224 TFCSIISGLCKANRIDDAFQVFKGMLER-GCVPDSLTYSIMLDNLSRANRLDTVDEVLEH 282
Query: 290 MRQKPSKRIKNMH----------RKNWDPVLE------------PDLVVYNAVLNACVPS 327
M+ + + ++ R P+ + P+L+ YN V++ S
Sbjct: 283 MQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKS 342
Query: 328 HQWKGVFWVFKQLRKSGL-KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRN 386
+ + +++ SG KP + L+ F + G++++A +
Sbjct: 343 GNVDDAWKLSRKMLDSGCCKPDVIFF------------NTLISGFCKAGRLSQAHQLLIE 390
Query: 387 MEQRGV-VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M+ + + V Y L G + A L++++++++ KP +T+ LI
Sbjct: 391 MKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAV-GCKPNVVTYAALINGYAKH 449
Query: 446 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G ++ S+F M C P+I T N +L +S+ M SKA+ ++++ N + Y
Sbjct: 450 GMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLK--NKTSYC--- 504
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
PD TY +++ A E + + M G D + L+ +
Sbjct: 505 ------SPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAK 552
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 149/368 (40%), Gaps = 46/368 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ L + +A SV G+ + + F Y+ L+A L + + EA + N M+
Sbjct: 58 LLRSLCQAQRFEEARSVFR---GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI 114
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D P++ Y S+ L ++G LKE V L RM + PD V
Sbjct: 115 -DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCP---------------PDGV 158
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
VYN +++ + +F+++ + G P+ TY L+ F +G
Sbjct: 159 VYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY------------NSLLSGFSRKG 206
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ + ++M ++G V + L C G +A + +++SL P +++
Sbjct: 207 EFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL-GCPPDVVSY 265
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
L+ G + + + M + P+I + N ++ YS++ A +LF E +
Sbjct: 266 NTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPK 325
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
+ L+PD ++YS++++ A + V+K M +G D
Sbjct: 326 SG-------------LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372
Query: 555 LLVEASRA 562
L++ R
Sbjct: 373 LVIGLCRG 380
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 126/322 (39%), Gaps = 33/322 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D S++ + ++ M + G + T LL G KG + + S+ +
Sbjct: 162 VLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFK---DM 218
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ + + F + LL K G EA R+F L + PD+ +Y+++ + G
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLF-LEMRSLGCPPDVVSYNTLMRGMCSKGK 277
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
E +L+ M + + PD+V YN +++ S +F +
Sbjct: 278 PHEAQRLLREMIRSG---------------VGPDIVSYNILIDGYSKSGALDHAIKLFYE 322
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ KSGL+P A +Y ++ L RA GK+ A ++M G A+V
Sbjct: 323 IPKSGLEPDAFSYST--------IIDCLCRA----GKVGAAFVVFKDMIANGSAPDAAVV 370
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
L LC R ++ + + + PL + L+ DD IF +
Sbjct: 371 IPLVIGLCRGERLTESCELFQAMVKF-ECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELT 429
Query: 460 DHC-EPNIGTVNAMLKVYSRND 480
+ P++ +L+ R+D
Sbjct: 430 ERGFSPDVEISKVILETLRRSD 451
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/300 (19%), Positives = 117/300 (39%), Gaps = 33/300 (11%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P+ Y +L + + +++ VF+ + G P+ +Y +L+
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSY------------SILIAGL 97
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
K++EA + M G Y L LC G+ ++A+ + ++ R P
Sbjct: 98 CRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRM-VYRGCPPD 156
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ + LI G + + +F+ M + C P + T N++L +SR F + + LF+
Sbjct: 157 GVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFK 216
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ R P+ +T++++L+ ++ M GC D
Sbjct: 217 DMLRQGCV-------------PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVV 263
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ L+ GK H + ++ +G P +++ I+ Y K+ AL +A+
Sbjct: 264 SYNTLMRGMCSKGKPHEAQRLLREMIRSGVGP------DIVSYNILIDGYSKSGALDHAI 317
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 56/126 (44%)
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
E+ ++ R + T+ GA P+ YTY +L + A ++E V++GMA GC
Sbjct: 25 EVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCS 84
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
+ ++ L+ R K + +++ G P+ + + +L ++AV L
Sbjct: 85 PNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDL 144
Query: 607 INAMAY 612
+ M Y
Sbjct: 145 FSRMVY 150
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 99/482 (20%), Positives = 191/482 (39%), Gaps = 63/482 (13%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K +R EA L+ L + T+ V R M + M LLKGL D+
Sbjct: 115 KKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRS 174
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++A+ + + + YT ++ K G +A ++ ML D + PD+
Sbjct: 175 QEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEML-DRRISPDVVT 233
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQ---------------------KPSKRIKNMHRKN 305
Y S+ L + + + ++++ M + +P + I + +
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVR 293
Query: 306 WDPV----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
D V LEPD+ Y +L G+ + + ++G+ P Y
Sbjct: 294 SDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVY--------- 344
Query: 362 CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
+L+ A+ ++GK++EA+ M Q+G+ A Y + LC +GR +DAML E+
Sbjct: 345 ---NILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQ 401
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRN 479
+ S P I + LI + + M D C I N+++ + +
Sbjct: 402 MIDEGLS-PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI-FFNSIIDSHCKE 459
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
++++LF+ R +KPD TYS++++ A + + + G
Sbjct: 460 GRVIESEKLFDLMVRIG-------------VKPDIITYSTLIDGYCLAGKMDEAMKLLSG 506
Query: 540 MALSGCQLDQTKHAWLL---VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 596
M G + + + L+ + SR G +L F + +G P + + +++Q +
Sbjct: 507 MVSVGLKPNTVTYRTLINGYCKISRMGDALVL---FKEMESSGVSPDIITY-NIILQGLF 562
Query: 597 QS 598
Q+
Sbjct: 563 QT 564
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 126/302 (41%), Gaps = 43/302 (14%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+ L+ +L K G+ EA + +M++ + P++ Y+S+ VG L +L M
Sbjct: 307 FNVLIDVLCKEGKVIEAKDLLEVMIQR-GIVPNLLTYNSLIEGFCLVGDLNSARELFVSM 365
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
PSK EPD++ Y ++N + + + ++ + + G +P
Sbjct: 366 ---PSKGC------------EPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 410
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TYG L+ ++ GK+ +A M+ G+ G +Y LC NG
Sbjct: 411 TYG------------ALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNG 458
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
+AM + K+KS +E F LI G ++ +F+ + ++ +P++ T
Sbjct: 459 CLFEAMELFNKLKSYNIKLDIE-CFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTY 517
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
N M+ + R KA LF++ + + PD+ TY++++ + +
Sbjct: 518 NIMIHEFCRGGQVVKANILFQKMEKNGCT-------------PDKITYATLIRGFFESKK 564
Query: 530 WE 531
E
Sbjct: 565 LE 566
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 103/249 (41%), Gaps = 37/249 (14%)
Query: 147 PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDK 203
P K + VL++ + + K M Q G + T G +L L G
Sbjct: 366 PSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKV 425
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G ++ V+ VYG+ DL ++Y L L K G EA+ +FN L+ N+ D
Sbjct: 426 GDAKKLFGVMK-VYGIPG--DL---YIYGIFLNGLCKNGCLFEAMELFN-KLKSYNIKLD 478
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA 323
I ++ + L + G L+ +L E++ Q+ L+PD+V YN +++
Sbjct: 479 IECFNCLIDGLCKAGKLETAWELFEKLPQEE---------------LQPDVVTYNIMIHE 523
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAA 383
Q +F+++ K+G P TY L+R F+E K+ + V
Sbjct: 524 FCRGGQVVKANILFQKMEKNGCTPDKITYA------------TLIRGFFESKKLEKVVEL 571
Query: 384 VRNMEQRGV 392
+ M QR V
Sbjct: 572 LHMMVQRDV 580
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 115/272 (42%), Gaps = 29/272 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+V Y ++ H+ +F +++K G P+A TYG M+ R +
Sbjct: 164 PDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKL 223
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+E +N+ +++ + + VV + S+ + LC + R +A + E++K ++ P
Sbjct: 224 HQE-MLND--SSLYGINFKPVVISYSIIID---ALCKDRREDEARDLFEEMK-VQGMTPT 276
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
I++T L+ ++ +F M + +PN+ T N ++ V + +AK+L E
Sbjct: 277 VISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLE 328
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ + P+ TY+S++E ++ M GC+ D
Sbjct: 329 VMIQRG-------------IVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVI 375
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ L+ + K ++ +L+ G+ P
Sbjct: 376 CYTVLINGYCKTSKVEEAMKLYNGMLQVGKRP 407
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/287 (18%), Positives = 114/287 (39%), Gaps = 41/287 (14%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P L + +L+ + VF+++ Q+R SG+ P C L +L+
Sbjct: 94 PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDC------------CTLNILLNCL 141
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
++ E +A + + +RG + Y L LC R A L+ +++ L P
Sbjct: 142 CNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKL-GCTPN 200
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKD-------HCEPNIGTVNAMLKVYSRNDMFSK 484
IT+ L+ G+I + + Q M + + +P + + + ++ ++ +
Sbjct: 201 AITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDE 260
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A++LFEE + P +Y+S++ WE + ++ M G
Sbjct: 261 ARDLFEEMKVQG-------------MTPTVISYTSLM--------WEEAKRLFNEMVNQG 299
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
Q + L+ + GK + + +++ G +P+ L + ++
Sbjct: 300 VQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 346
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 110/565 (19%), Positives = 212/565 (37%), Gaps = 90/565 (15%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
+R A LV L+ ++ + M+ SG + + L G W A+
Sbjct: 200 YRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADAL 259
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN-LYPDIAAYHS 269
++L+ K+ +L + T++++ L +A +EA+ + M CN P++ Y +
Sbjct: 260 NMLE-----KEDFNLDTVLC-TQMISGLMEASLFNEAMSFLHRM--RCNSCIPNVVTYRT 311
Query: 270 VAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
+ L +++ + KRI NM P+ ++N++++ +
Sbjct: 312 L------------LSGFLKKKQFGWCKRIINMMMTEG---CNPNPSLFNSLVHGYCNAGD 356
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGL------AMESYRRCLLKVLVRAFWEE--------- 374
+ + +F ++ G P Y + E L LV +EE
Sbjct: 357 YAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLN 416
Query: 375 --------------GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
GK +A ++ M ++G V S Y ++ LC + + + L+ +
Sbjct: 417 KVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQ 476
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRN 479
++K P T+T LI S G I+ S F M+ C PN+ T A+L Y ++
Sbjct: 477 EMKR-AGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKS 535
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY-K 538
+A ++F A P+ TYS++++ A + + VY K
Sbjct: 536 KQLIQAHDIFHRMVDA-------------ACYPNAVTYSALIDGLCKAGEIQKACEVYEK 582
Query: 539 GMALSG-------------CQL--DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
+ SG C + + + L+ +A K D++L AG P+
Sbjct: 583 LIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPN 642
Query: 584 PLFFTEMLIQAIVQ----SNYEKAVALINAMAYAP-FHITERQWTELFESNEDRISRDKL 638
+ + + LI + N ++ + Y P H +F+ ++ L
Sbjct: 643 QIVY-DALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 701
Query: 639 EKLLNALCNCNAASSEITVSNLSRA 663
++LN CN N + + LS+
Sbjct: 702 SEMLNDSCNPNVVTYTAMIDGLSKV 726
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/483 (19%), Positives = 196/483 (40%), Gaps = 54/483 (11%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
+++ GL + + +AMS L + ++ + + Y LL+ K + RI N+M
Sbjct: 276 QMISGLMEASLFNEAMSFL---HRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMM 332
Query: 255 L-EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM----------------------R 291
+ E CN P+ + ++S+ G KL RM
Sbjct: 333 MTEGCN--PNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQE 390
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLV---VYNAVLNACVPS-HQWKGVFWVFKQLRKSGLKP 347
+ P+ + ++ K ++ +L V V A + C+ +++ F + K++ + G P
Sbjct: 391 ELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVP 450
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+TY ++ + K+ ++ + M++ GV Y L C
Sbjct: 451 DTSTY------------TKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFC 498
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
G + A ++++S+ S P +T+T L+ + + + IF M D C PN
Sbjct: 499 KAGLIEQARSWFDEMRSVGCS-PNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNA 557
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEE---TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
T +A++ + KA E++E+ T+ S + F D + P+ TY ++++
Sbjct: 558 VTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDG 617
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
A + + M +GC+ +Q + L+ + GK + F + + G +P
Sbjct: 618 LCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPS 677
Query: 584 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISR-DKLEKLL 642
+T ++ + + A+ +++ M + +T + D +S+ ++EK L
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMI----DGLSKVGEIEKAL 733
Query: 643 NAL 645
N L
Sbjct: 734 NLL 736
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 119/345 (34%), Gaps = 55/345 (15%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N ++ C W +L+ G +PSA TY LV+ G++
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTY------------NALVQVLASAGQV 220
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+ M G S A LC GRW DA+ ++EK + T
Sbjct: 221 EMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADALNMLEK----EDFNLDTVLCTQ 276
Query: 438 LIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE----ET 492
+I M+ ++ +S M+ + C PN+ T +L + + F K + E
Sbjct: 277 MISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEG 336
Query: 493 TRANSSGYTFL------SGD--------------GAPLKPDEYTYSSML------EASAT 526
N S + L +GD G+P P Y+ + E
Sbjct: 337 CNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSP--PGYVAYNIFIGSICGQEELPN 394
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA---GEIPH 583
A + E VY+ M + C L++ A GK E AF L E G +P
Sbjct: 395 AELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGK---FEKAFQILKEMMRKGFVPD 451
Query: 584 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
+T+++ EK+ L M A + +T L +S
Sbjct: 452 TSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDS 496
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 30/157 (19%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKEL 283
L S YT L+ + K GR A+++ + ML D CN P++ Y ++ L +VG +++
Sbjct: 675 LPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCN--PNVVTYTAMIDGLSKVGEIEKA 732
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+ L+ M +K P++V Y A+++ + + +FKQ+
Sbjct: 733 LNLLSLMEEKGCS---------------PNVVTYTALIDGLGKTGKADASLKLFKQMNSK 777
Query: 344 GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA 380
G P+ TY +VL+ G ++EA
Sbjct: 778 GCAPNYVTY------------RVLINHCCAAGLLDEA 802
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 71/389 (18%), Positives = 138/389 (35%), Gaps = 67/389 (17%)
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+K + +K M RK + PD Y V+ + + + F +F++++++G+ P T
Sbjct: 434 EKAFQILKEMMRKGF----VPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYT 489
Query: 352 YGLAMESYRRCLL-----------------------KVLVRAFWEEGKINEAVAAVRNME 388
Y + ++S+ + L L+ A+ + ++ +A M
Sbjct: 490 YTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMV 549
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS---------------KPLEI 433
A Y L LC G Q A V EK+ + P +
Sbjct: 550 DAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVV 609
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T+ LI + D + M CEPN +A++ + + A+E+F
Sbjct: 610 TYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRM 669
Query: 493 TRAN--SSGYTFLS------GDGA--------------PLKPDEYTYSSMLEASATAHQW 530
T+ S +T+ S DG P+ TY++M++ + +
Sbjct: 670 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEI 729
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
E + M GC + + L+ + GK F + G P+ + + +
Sbjct: 730 EKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVL 789
Query: 591 LIQAIVQSNYEKAVALINAMAYA--PFHI 617
+ ++A L++ M + P H+
Sbjct: 790 INHCCAAGLLDEAHLLLDEMKHTHWPKHL 818
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 116/275 (42%), Gaps = 42/275 (15%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
AG+P +A+++F L + + + D+A+++++ L + +++ +L +R + S
Sbjct: 139 AGKPDKAVKLF-LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV---- 193
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY- 359
D V YN +LN + V K++ + G+ P+ TY ++ +
Sbjct: 194 ------------DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFF 241
Query: 360 -----------------RRCLLKVL-----VRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
R C + V+ V F G+I A M + GV+ + +
Sbjct: 242 RAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 301
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y + LC ++A+++ E++ R +P T+ LI G + Q
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVR-RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 360
Query: 458 MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
M++ CEPN T N M++ YS KA LFE+
Sbjct: 361 MENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK 395
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 116/297 (39%), Gaps = 41/297 (13%)
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 476
++ +++SLR P TF + G D + +F +M +H C ++ + N +L V
Sbjct: 113 LIHRMRSLRIG-PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 477 SRNDMFSKAKELFE--------ETTRANS--SGYTFLSGDGAPLK-----------PDEY 515
++ KA ELF +T N +G+ + L+ P+
Sbjct: 172 CKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 516 TYSSMLE----ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
TY++ML+ A H WE+F + K C++D + ++ AG+ +
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKK----RDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 572 FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTE-LFE 627
FD ++ G +P + M+ + N E AV + M Y P T LF
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 347
Query: 628 SNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGS 684
+ E + ++++ N C N + + + S SE E+ L GS
Sbjct: 348 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSEC------SEVEKALGLFEKMGS 398
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLK-DKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNL 253
+LKG G R A W + L+ KRD + V YT ++ G AG A +F+
Sbjct: 236 MLKGFFRAGQIRHA-----WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 290
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M+ + + P +A Y+++ L + ++ V + E M ++ EP+
Sbjct: 291 MIRE-GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG---------------YEPN 334
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
+ YN ++ + ++ + +++ G +P+ TY + + Y C
Sbjct: 335 VTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSEC 383
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 160/406 (39%), Gaps = 57/406 (14%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
++F ++M ++ + L+ GL G +A + W + L +K S+ L
Sbjct: 415 FRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATEL--W-FRLLEKGSPASKVTSNAL 471
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L AG+ EA RI MLE L D Y+++ + G ++ +L E M ++
Sbjct: 472 IHGLCGAGKLPEASRIVKEMLER-GLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRG 530
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
++PD+ YN +L + ++ + + SGL + TYG+
Sbjct: 531 ---------------IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGI 575
Query: 355 AMESYRRC-----------------------LLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
ME Y + + ++++A + G + A+ + NM+ +G
Sbjct: 576 MMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKG 635
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
++ + Y L +CN G +DA ++++++ P + +T LI G +D
Sbjct: 636 ILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRK-EGFVPNVVCYTALIGGYCKLGQMDTA 694
Query: 452 ISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 510
S + M + PN T M+ Y + KA L + SG +
Sbjct: 695 ESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLL---IKMKESG----------I 741
Query: 511 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
PD TY+ + A+ + V MA G +D+ + L+
Sbjct: 742 VPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 787
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 67/360 (18%), Positives = 136/360 (37%), Gaps = 54/360 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F +T ++ L K G+ A+ +F + +E + P++ Y+ + L Q G L +L E
Sbjct: 221 FSFTNVINALCKGGKMENAIELF-MKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKE 279
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M K ++P+L Y A++N + + + V + ++ +G P+
Sbjct: 280 KMTVKG---------------VQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPN 324
Query: 349 AATYGLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVR 385
+ ++ Y + L L++ F + +I A A+
Sbjct: 325 VVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALE 384
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS-SMD 444
+ G+ Y + LC R+ A + + S R+ +P ++ T L+ D
Sbjct: 385 EILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLS-RNFRPSDLLLTMLVCGLCKD 443
Query: 445 GGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G H++ F+ ++ + T NA++ +A + +E
Sbjct: 444 GKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLER--------- 494
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
G P+ D TY++++ + E + + M G Q D + +LL GK
Sbjct: 495 --GLPM--DRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGK 550
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 151/394 (38%), Gaps = 66/394 (16%)
Query: 225 LKSRFV------YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+KSR V +T L+ +AG EA+ FN M ED PD A+ V L +
Sbjct: 177 MKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM-EDYGCVPDKIAFSIVISNLSRKR 235
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
E + ++ + EPD++VY ++ + + VFK
Sbjct: 236 RASEAQSFFDSLKDR----------------FEPDVIVYTNLVRGWCRAGEISEAEKVFK 279
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
+++ +G++P+ TY + +++ RC G+I+ A +M G A
Sbjct: 280 EMKLAGIEPNVYTYSIVIDALCRC------------GQISRAHDVFADMLDSGCAPNAIT 327
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
+ L GR + + V ++K L +P IT+ LI + ++++ + + M
Sbjct: 328 FNNLMRVHVKAGRTEKVLQVYNQMKKL-GCEPDTITYNFLIEAHCRDENLENAVKVLNTM 386
Query: 459 -KDHCEPNIGTVNAMLK-------VYSRNDMFSKAKELFEETTRANSSGYTFL------- 503
K CE N T N + + V + M+SK + E N+ Y L
Sbjct: 387 IKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSK---MMEAKCEPNTVTYNILMRMFVGS 443
Query: 504 -----------SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ-TK 551
D ++P+ TY ++ W ++K M C +
Sbjct: 444 KSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSL 503
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+ +L + RAG+ E + +++ G + PL
Sbjct: 504 YEMVLAQLRRAGQLKKHEELVEKMIQKGLVARPL 537
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 113/272 (41%), Gaps = 32/272 (11%)
Query: 425 LRHSKPLEI---TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 480
L S+ +EI TFT LI + G + + F M+D+ C P+ + ++ SR
Sbjct: 176 LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKR 235
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
S+A+ F+ +PD Y++++ A + E V+K M
Sbjct: 236 RASEAQSFFDSLKDR--------------FEPDVIVYTNLVRGWCRAGEISEAEKVFKEM 281
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 600
L+G + + ++ ++ R G+ F +L++G P+ + F ++ +
Sbjct: 282 KLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRT 341
Query: 601 EKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL----CNCNAASSEIT 656
EK + + N M + L E++ + + K+LN + C NA+ T
Sbjct: 342 EKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNAS----T 397
Query: 657 VSNLSRALHALCRSEKERDLSSSAHFGSQAID 688
+ + R + EK+RD++ + S+ ++
Sbjct: 398 FNTIFRYI------EKKRDVNGAHRMYSKMME 423
>gi|302819015|ref|XP_002991179.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
gi|300141007|gb|EFJ07723.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
Length = 561
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 174/426 (40%), Gaps = 52/426 (12%)
Query: 85 WER--IERLKFRQLASESKEFAGD-NLKRENLRELKEMFEKDLNWVLDDDVQLGSDYFAK 141
WER +E K + + K++AGD N+ RE++ F++ W + K
Sbjct: 90 WERMMLEVEKSPEPLAILKKYAGDGNISRESVVGTLTRFKQMQAWKI----------IIK 139
Query: 142 NVEWHPEKRWRS--EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKG 199
EW E+ W + + + VL+ + ++ F R M + G+ ++G
Sbjct: 140 FTEWLMEQGWYNFNQKDYFLVLLAYCKDGQVDKTEGIFQR-MAELGVAANIEMYTLQIEG 198
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
G + S+ +A +V + ++ Y ++ +AGR + RIF L+ + +
Sbjct: 199 YGRRRSFDKAEAVFQRLLTTGPSPTAQT---YQTMMKSYSEAGRLDDVQRIFKLVTDSPS 255
Query: 260 --LYPDIAAYHSVAVTLGQVGLLKELVKLIERMR-----------------QKPSKRIKN 300
+ PD Y+ + T G+ G +++ + + + M+ QK K ++
Sbjct: 256 PTVKPDARMYNLMIHTYGKQGKVEQAMSVYQSMKRERVALTIVTFNSLLACQKTWKDAED 315
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+ RK L+PD+ Y A++NA + + + F + +G++P+ Y + +Y
Sbjct: 316 VFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYA 375
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
+C EG A A ++ M+Q G T Y L + A V
Sbjct: 376 KCKDP--------EG----ARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVL 423
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRN 479
++K L+ TF L+ +G +D+ + F+ MK EPN ++ Y N
Sbjct: 424 RMKEADLQPNLQ-TFCILMTGYANGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNAYGSN 482
Query: 480 DMFSKA 485
D F A
Sbjct: 483 DDFDSA 488
>gi|297737146|emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 180/421 (42%), Gaps = 60/421 (14%)
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDC 258
L ++ W +A+ + +W LK K + + Y +L ILGKA + H +++ M+
Sbjct: 170 LKEQSCWERALEIFEW---LKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSR- 225
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
+ P + Y ++ + GL +E + ++RM ++ +EPD V
Sbjct: 226 GITPVNSTYGTLIDVYSKGGLTEEALHWLDRMNKQG---------------MEPDEVTMG 270
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKIN 378
V V +++ G F +Q K+ SA+ + + SY L+ + + G++
Sbjct: 271 VV----VQTYKKAGEFKKAEQFFKNWSLESASQPHVCLSSYT---YNTLIDTYGKAGQLR 323
Query: 379 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
EA M + G++ + + N+G+ ++A +++K++ LR P T+ L
Sbjct: 324 EASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEELR-CPPDTRTYNIL 382
Query: 439 IISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
I +ID S F+ MK+ EP++ + +L +S + +A+ L E
Sbjct: 383 ISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIRHLVGEAEILVSEM----- 437
Query: 498 SGYTFLSGDGAPLKPDEYTYSSM----LEASATAHQWEYFEYVY-KGMALSGC---QLDQ 549
D L+ DE+T S++ +EA W +F + +G S C +D
Sbjct: 438 --------DERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGNMSSECYSANIDA 489
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
++EA +A C E S+LE F M+ + + YEKA LI++
Sbjct: 490 YGERGHILEAEKAFLC-CKESRKLSVLE---------FNVMIKAYGISNRYEKACQLIDS 539
Query: 610 M 610
M
Sbjct: 540 M 540
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 91/459 (19%), Positives = 187/459 (40%), Gaps = 57/459 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL-DW-VY 217
L+D S+ +T + ++ MN+ G+ E M +++ G +++A +W +
Sbjct: 236 TLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLE 295
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
S + Y L+ GKAG+ EA F ML + + P+ ++++ G
Sbjct: 296 SASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLRE-GIIPNTVTFNTMIHICGNH 354
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G L+E L+++M + PD YN +++ + F
Sbjct: 355 GQLEEAASLMQKMEELRCP---------------PDTRTYNILISLHAKHNNIDRAASYF 399
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
K+++++ L+P +Y + L+ AF + EA V M++RG+
Sbjct: 400 KKMKEARLEPDLVSY------------RTLLYAFSIRHLVGEAEILVSEMDERGLEIDEF 447
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
L G + + L + L + E ++ I + + GHI + F
Sbjct: 448 TQSALTRMYIEAGMLKKSWLWFRRFH-LEGNMSSE-CYSANIDAYGERGHILEAEKAFLC 505
Query: 458 MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
K+ + ++ N M+K Y ++ + KA +L + S + + PD+++Y
Sbjct: 506 CKESRKLSVLEFNVMIKAYGISNRYEKACQLID-------------SMENHGVLPDKFSY 552
Query: 518 SSMLEASATA---HQWEYFEYVYKGMALSGCQL--DQTKHAWLLVEASRAGKCHLLEHAF 572
+S+++ A+A H+ +++ M + QL D + ++ + G+ + E F
Sbjct: 553 NSLIQILASADLPHKAKFYL-----MKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLF 607
Query: 573 DSLLEAGEIPHPLFFTEMLIQAIVQ-SNYEKAVALINAM 610
++ P + + +LI A N +AV +NA+
Sbjct: 608 KEMIGYNVQPDVVVYG-ILINAFADVGNVREAVNYVNAL 645
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 130/337 (38%), Gaps = 69/337 (20%)
Query: 167 EREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK 226
E M K+W + R + G M +E + G++G +A K+ R L
Sbjct: 458 EAGMLKKSWLWFRRFHLEGNMSSECYSANI-DAYGERGHILEAEKAF---LCCKESRKL- 512
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S + ++ G + R +A ++ + M E+ + PD +Y+S+ L L +
Sbjct: 513 SVLEFNVMIKAYGISNRYEKACQLIDSM-ENHGVLPDKFSYNSLIQILASADLPHKAKFY 571
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +M++ L D + Y AV+++ + Q + +FK++ ++
Sbjct: 572 LMKMQETQ---------------LVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQ 616
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P YG +L+ AF + G + EAV V + G+ A +Y L
Sbjct: 617 PDVVVYG------------ILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLY 664
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI 466
G ++A E K L+ S+ P++
Sbjct: 665 TKVGYLEEAQ---EAYKMLQASE--------------------------------VGPDV 689
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTR-ANSSGYTF 502
+ N M+ +YS M +A+E+FE R +++ ++F
Sbjct: 690 YSSNCMIDLYSERSMVKQAEEIFESLKRKGDANEFSF 726
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 82/413 (19%), Positives = 157/413 (38%), Gaps = 46/413 (11%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQV 277
+KD + +YT L+A+ K H AL +F M C PD+ Y + LG+
Sbjct: 252 MKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCR--PDVFTYTELIRGLGKA 309
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G E MR++ + PD VV N ++N + + +F
Sbjct: 310 GRFDEAYNFFHEMRREGCR---------------PDTVVINNMINFLGKAGRLDDAVKLF 354
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE-EGKINEAVAAVRNMEQRGVVGTA 396
+++ PS TY +++A +E + +I+E + M+ G+ +
Sbjct: 355 EEMGTLQCIPSVVTY------------NTIIKALFESKSRISEISSWFERMKGSGISPSP 402
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
Y L C R + AM+++E++ + P + LI + D +FQ
Sbjct: 403 FTYSILIDGFCKTNRTEKAMMLLEEMDE-KGFPPCPAAYCSLIDALGKAKRYDIAHELFQ 461
Query: 457 HMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
+K++C + V A M+K + A LF+E + + P+ Y
Sbjct: 462 ELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCT-------------PNVY 508
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
Y++++ A A + + M GC D + +L ++ G H ++
Sbjct: 509 AYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNM 568
Query: 576 LEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
++ P + + +L +E+A L+ M F ++ + E+
Sbjct: 569 KQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEA 621
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 19/197 (9%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + T K + M++ G L+ LG + A + L
Sbjct: 407 ILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQ---EL 463
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+ S VY ++ LGKAGR +A+ +F+ M P++ AY+++ L + G+
Sbjct: 464 KENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEM-NKLGCTPNVYAYNALMSGLARAGM 522
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L E + + RM++ PD+ YN +LN + +
Sbjct: 523 LDEALTTMRRMQEHGCI---------------PDINSYNIILNGLAKTGGPHRAMEMLSN 567
Query: 340 LRKSGLKPSAATYGLAM 356
+++S +KP A +Y +
Sbjct: 568 MKQSAIKPDAVSYNTVL 584
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 95/233 (40%), Gaps = 15/233 (6%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
++R I++AVA ++ R TA Y + L + G+++ + ++ +
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEG 220
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 485
H P +T++ LI + G D I + MKD+ +P ++ ++ + + A
Sbjct: 221 HCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGA 280
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
LFEE +PD +TY+ ++ A +++ + M GC
Sbjct: 281 LGLFEEMRHQYC-------------RPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGC 327
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
+ D ++ +AG+ F+ + IP + + +I+A+ +S
Sbjct: 328 RPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNT-IIKALFES 379
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 102/504 (20%), Positives = 200/504 (39%), Gaps = 99/504 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G R A+ +L + GL R +YT ++ K +A +++ M+
Sbjct: 164 LINGLCKSGETRAALQLLRKIEGLLLVR--PDVIMYTAIIDSFCKDKLVIDAYDLYSEMI 221
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+YP++ ++S+ VG LKE V L+ M + N++ P++
Sbjct: 222 VK-KIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMS------LNNVN---------PNVY 265
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+N +++ + K V + K G++P+ TY M+ Y LV+
Sbjct: 266 TFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGY------FLVK------ 313
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
++N+A + RGV Y + LC N +A+ + +++ L++ P +T+
Sbjct: 314 EVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMH-LKNMTPNTVTY 372
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
+ LI G I D + + + +P NI T N++L +N KA L T+
Sbjct: 373 SSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALL---TK 429
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
G ++PD TY+++++ + + + +Y+ + G L+ +
Sbjct: 430 MKDEG----------IQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTV 479
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---A 611
++ + G FF E A++L++ M
Sbjct: 480 MINGLCKEG----------------------FFDE-------------ALSLLSQMEDNG 504
Query: 612 YAPFHIT-ERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRS 670
P +T E + LF++N++ + L +++ +C+ R
Sbjct: 505 CMPDAVTYETLISALFKNNKNGKAVKLLREMIARESDCSGKEQS--------------RE 550
Query: 671 EKERDLSS-SAHFGSQAIDISPLH 693
+K++D SS F + + SPLH
Sbjct: 551 KKDKDTSSYPGSFHNTEVVQSPLH 574
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 98/491 (19%), Positives = 181/491 (36%), Gaps = 66/491 (13%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYT--KLLAILGKAGRPH 245
T Q + ++ L + A+ W G + R ++ T LLA G + H
Sbjct: 690 LTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLAN-GNLQKAH 748
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
E +R ML + ++G L E V ++ M+ +
Sbjct: 749 EVMRC---MLRN----------------FSEIGRLNEAVGMVMDMQNQG----------- 778
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
L P + N VL V + VF ++ G+ P +++Y K
Sbjct: 779 ----LTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY------------K 822
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
++V + +GKI EA + M QRG + + + LC NG A+ K+ L
Sbjct: 823 LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDL 882
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 484
KP I FT LI G I + + M ++ +PN+ T A++ + K
Sbjct: 883 GF-KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 941
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A LF + R+++ KP+ +TY+SM+ + E ++ M G
Sbjct: 942 AFRLFLKLVRSDT------------YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 989
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
+ + L+ +AG + + + G +P+ + + +S +A
Sbjct: 990 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 1049
Query: 605 ALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 664
L+N +T L +++ ++ + + L C N E + + +
Sbjct: 1050 ELLNKAFSCGLEADGVTYTILI---QEQCKQNDINQALAFFCRMNKTGFEADMRLNNILI 1106
Query: 665 HALCRSEKERD 675
A CR +K ++
Sbjct: 1107 AAFCRQKKMKE 1117
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 141/355 (39%), Gaps = 43/355 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+++ L E + + + R M G L+ GL KGS +QA +L+ +
Sbjct: 858 LILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN 917
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K ++ + +T L+ L K G +A R+F ++ P++ Y S+ +
Sbjct: 918 GWKPNV---YTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDK 974
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L L RM+++ L P++ Y ++N + + + +
Sbjct: 975 LNRAEMLFSRMKEQG---------------LFPNVNTYTTLINGHCKAGSFGRAYELMNL 1019
Query: 340 LRKSGLKPSAATYGLAMESYRR----------------CLLK-------VLVRAFWEEGK 376
+ G P+ TY A++S + C L+ +L++ ++
Sbjct: 1020 MGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQND 1079
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
IN+A+A M + G + L C + +++ + + + SL P + T+T
Sbjct: 1080 INQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL-GLIPTKETYT 1138
Query: 437 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+I G ID + F +MK H C P+ T +++ + M +A +L+E
Sbjct: 1139 SMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE 1193
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 160/406 (39%), Gaps = 57/406 (14%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
++F ++M ++ + L+ GL G +A + W + L +K S+ L
Sbjct: 438 FRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATEL--W-FRLLEKGSPASKVTSNAL 494
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ L AG+ EA RI MLE L D Y+++ + G ++ +L E M ++
Sbjct: 495 IHGLCGAGKLPEASRIVKEMLER-GLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRG 553
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
++PD+ YN +L + ++ + + SGL + TYG+
Sbjct: 554 ---------------IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGI 598
Query: 355 AMESYRRC-----------------------LLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
ME Y + + ++++A + G + A+ + NM+ +G
Sbjct: 599 MMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKG 658
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
++ + Y L +CN G +DA ++++++ P + +T LI G +D
Sbjct: 659 ILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRK-EGFVPNVVCYTALIGGYCKLGQMDTA 717
Query: 452 ISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPL 510
S + M + PN T M+ Y + KA L + SG +
Sbjct: 718 ESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLL---IKMKESG----------I 764
Query: 511 KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
PD TY+ + A+ + V MA G +D+ + L+
Sbjct: 765 VPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 810
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 69/360 (19%), Positives = 136/360 (37%), Gaps = 54/360 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F +T ++ L K G+ A+ +F + +E + P++ Y+ + L Q G L +L E
Sbjct: 244 FSFTNVINALCKGGKMENAIELF-MKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKE 302
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M K ++P+L Y A++N + + + V V ++ SG P+
Sbjct: 303 KMTVKG---------------VQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPN 347
Query: 349 AATYGLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVR 385
+ ++ Y + L L++ F + +I A A+
Sbjct: 348 VVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALE 407
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS-SMD 444
+ G+ Y + LC R+ A + + S R+ +P ++ T L+ D
Sbjct: 408 EILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLS-RNFRPSDLLLTMLVCGLCKD 466
Query: 445 GGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G H++ F+ ++ + T NA++ +A + +E
Sbjct: 467 GKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLER--------- 517
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
G P+ D TY++++ + E + + M G Q D + +LL GK
Sbjct: 518 --GLPM--DRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGK 573
Score = 39.7 bits (91), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 17/141 (12%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
+D Y L K S LL+ L KA + +F +M E PD+ ++ +V
Sbjct: 194 VDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGA--CPDVFSFTNVIN 251
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
L + G ++ ++L +M + + P++V YN ++N + +
Sbjct: 252 ALCKGGKMENAIELFMKMEKLG---------------ISPNVVTYNCIINGLCQNGRLDN 296
Query: 333 VFWVFKQLRKSGLKPSAATYG 353
F + +++ G++P+ TYG
Sbjct: 297 AFELKEKMTVKGVQPNLKTYG 317
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 113/262 (43%), Gaps = 33/262 (12%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K +R + +T ++ + GKA +P ++++FN M + P+I Y ++ + G
Sbjct: 73 MKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEM-KSIGCKPNICTYTALVNAFAREG 131
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
L ++ ++ E M+Q EPD+ YNA++ A + +G +F
Sbjct: 132 LCEKAEEVFEEMQQAGH---------------EPDVYAYNALMEAYSRAGLPQGASEIFS 176
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
++ G +P A+Y + +++Y R L A +EE ++QRG+ T
Sbjct: 177 LMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEE------------LKQRGMSPTMKS 224
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQ 456
+ L L + R +A E + L S P ++ + G +DD +F
Sbjct: 225 HMLL---LAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFA 281
Query: 457 HMKDHCEPNIGTVNAMLKVYSR 478
M+ + ++GT N + Y R
Sbjct: 282 AMERRGDADVGTYNVAVNAYGR 303
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+L+RA+ G ++ A + M + G+ A+VY L + A+ V +++K
Sbjct: 17 LLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRE 76
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSK 484
R E TFT +I + +F MK C+PNI T A++ ++R + K
Sbjct: 77 RCRANTE-TFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEK 135
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A+E+FEE +A +PD Y Y++++EA + A + ++ M G
Sbjct: 136 AEEVFEEMQQAGH-------------EPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMG 182
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
C+ D+ + L+ RAG E F+ L + G P
Sbjct: 183 CEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSP 220
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/420 (20%), Positives = 156/420 (37%), Gaps = 55/420 (13%)
Query: 216 VYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
V+ + K+ + V YT L+ L + GR E + IF M ED + YP + Y + L
Sbjct: 26 VFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMRED-DCYPTVRTYTVIVHAL 84
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G E + L MR++ EP++ Y ++NA + +
Sbjct: 85 FESGRRMEAINLFSEMRERGC---------------EPNIHTYTVMINAMCKETKLEEGR 129
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
+ ++ + GL PS TY L+ + +EG + A + M
Sbjct: 130 RILDEMVEKGLVPSVPTY------------NALIDGYCKEGMVEAAQEILDLMHSNSCNP 177
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
Y EL C C AM ++ K+ R + P +T+ LI G++D +
Sbjct: 178 NERTYNELICGFCRKKNVHRAMALLSKMLESRLT-PSVVTYNSLIHGQCKIGYLDSAYRL 236
Query: 455 FQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF----EETTRANSSGYTFLSGDG-- 507
M ++ P+ T + + + +A LF E+ +AN YT L DG
Sbjct: 237 LNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALI-DGYC 295
Query: 508 -----------------APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
P+ TY+++++ + + + + M G +
Sbjct: 296 KAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVP 355
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ L+V + G D ++ +G P +T + + N ++A +++ M
Sbjct: 356 TYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMM 415
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 92/517 (17%), Positives = 194/517 (37%), Gaps = 88/517 (17%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E+ V+++ + + + + + M + GL+ + L+ G +G
Sbjct: 102 ERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVE 161
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
A +LD ++ + ++ Y +L+ + H A+ + + MLE L P + Y
Sbjct: 162 AAQEILDLMHSNSCNPNERT---YNELICGFCRKKNVHRAMALLSKMLES-RLTPSVVTY 217
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+S+ ++G L +L+ M + + PD Y+ ++
Sbjct: 218 NSLIHGQCKIGYLDSAYRLLNLMNENG---------------VVPDQWTYSVFIDTLCKK 262
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ + +F L++ G+K + Y L+ + + GK+++A + + M
Sbjct: 263 GRIEEANVLFNSLKEKGIKANEVIY------------TALIDGYCKAGKMDDANSLLDRM 310
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI--KSLRHSKPLEITFTGLIISSMDG 445
+ +S Y L LC + Q+A+L++E + K L+ + P T+T LI++ +
Sbjct: 311 LTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVP---TYTILIVAMLKE 367
Query: 446 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL----FEETTRANSSGY 500
G D I M +P++ A + + +A+++ FE ++ Y
Sbjct: 368 GDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTY 427
Query: 501 TFL----SGDG--------------APLKPDEYTYSSMLEA------------------- 523
T + G G P +TYS +++
Sbjct: 428 TLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSI 487
Query: 524 -----SATAHQWEYFEY-----VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
+ A W+ ++ +++ M GC + +A L++ + G+ + + FD
Sbjct: 488 PNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFD 547
Query: 574 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ E G P + +L Y AV L+ AM
Sbjct: 548 HMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAM 584
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/316 (19%), Positives = 119/316 (37%), Gaps = 40/316 (12%)
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+FK++R+ P+ TY V+V A +E G+ EA+ M +RG
Sbjct: 61 IFKKMREDDCYPTVRTY------------TVIVHALFESGRRMEAINLFSEMRERGCEPN 108
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKI--KSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
Y + +C + ++ +++++ K L S P T+ LI G ++
Sbjct: 109 IHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVP---TYNALIDGYCKEGMVEAAQE 165
Query: 454 IFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET--TRANSSGYTFLSGDGAPL 510
I M + C PN T N ++ + R +A L + +R S T+ S
Sbjct: 166 ILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQC 225
Query: 511 K--------------------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
K PD++TYS ++ + E ++ + G + ++
Sbjct: 226 KIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEV 285
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ L+ +AGK D +L +P+ + ++ + ++A+ L+ +M
Sbjct: 286 IYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESM 345
Query: 611 AYAPFHITERQWTELF 626
T +T L
Sbjct: 346 IQKGLKCTVPTYTILI 361
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/410 (18%), Positives = 163/410 (39%), Gaps = 55/410 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLD--WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
++ G G ++A+ ++D + GLK +R+ Y ++ +L K G+ EA ++
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLK-----PNRYTYNSIILLLCKIGKSFEAEKVLRE 353
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP------------------S 295
M+ + PD Y ++ ++G ++ K + M K
Sbjct: 354 MMSQ-KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGG 412
Query: 296 KRI--KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
K I +N+ + L+PD V Y +++ + + F + ++ + G+ P+ TYG
Sbjct: 413 KVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYG 472
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
L+ + G+++ A + M ++G+ +Y + +C G +
Sbjct: 473 ------------ALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIE 520
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAM 472
A+ ++++++ + P IT+T +I + G ID + Q M D +P + T N +
Sbjct: 521 QAIKLMKEME-VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVL 579
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
+ + M L G+ G + PD TY+++++ +
Sbjct: 580 MNGFCMLGMLEDGDRLL---------GWMLEKG----IVPDAITYNTLMKQHCIRNSMNT 626
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+YK M G D + L+ +A + ++E G +P
Sbjct: 627 TTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVP 676
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 65/352 (18%), Positives = 131/352 (37%), Gaps = 27/352 (7%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGK 376
YN ++ + + K + Q+ P +Y ++ Y C L G+
Sbjct: 261 YNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGY--CHL----------GE 308
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
+ +A+ + +M+ +G+ Y + LC G+ +A V+ ++ S + P + +T
Sbjct: 309 LKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMS-QKIIPDNVVYT 367
Query: 437 GLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
LI GH+ F M P+ T +++ + + + + LF E
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI-- 425
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
S G LKPDE TY+++++ A + ++ M G + + L
Sbjct: 426 -SRG----------LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGAL 474
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
+ + G+ D + + G + + M+ N E+A+ L+ M A
Sbjct: 475 IDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGI 534
Query: 616 HITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHAL 667
+T + ++ DK KLL + + + +T + L L
Sbjct: 535 DPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCML 586
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 132/365 (36%), Gaps = 77/365 (21%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
+ +Y+ + +L ++G +KE +L+ +M + S PD+V Y+ V++
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST---------------PDVVSYSTVID 301
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA 382
+ K + ++ GLKP+ TY ++ + GK EA
Sbjct: 302 GYCHLGELKKALKLMDDMQIKGLKPNRYTYN------------SIILLLCKIGKSFEAEK 349
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNG------RWQDAML------------------- 417
+R M + ++ VY L G +W D ML
Sbjct: 350 VLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFG 409
Query: 418 ----VVEKIKSLRHS------KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
V+E ++L H KP E+T+T LI G + + S+ M + PNI
Sbjct: 410 QGGKVIEP-QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNI 468
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T A++ ++ A EL +E + L+ + Y+SM+
Sbjct: 469 VTYGALIDGLCKHGELDTANELLDEMRKKG-------------LQLNVCIYNSMVNGICK 515
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
A E + K M ++G D + ++ R G +L+ G P +
Sbjct: 516 AGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVT 575
Query: 587 FTEML 591
F ++
Sbjct: 576 FNVLM 580
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 143/370 (38%), Gaps = 54/370 (14%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L R +A+ + M + + PD+ Y ++ L + + V+L+ M
Sbjct: 116 YTTLMRALCAERRTGQAVGLLRDM-QASGVRPDVVTYGTLIRGLCDAADVDKAVELLREM 174
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ +EP++VVY+ +L + +W+ V VF+++ G++P
Sbjct: 175 ---------------CESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVV 219
Query: 351 TYGLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNM 387
Y ++S R VL+ + +EG + EA++ NM
Sbjct: 220 MYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNM 279
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
++GV A Y L L +AM L+ E I +P +TF +I G
Sbjct: 280 LEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTG 339
Query: 447 HIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
+ + M ++ C N+ T N ++ R KA EL +E SSG
Sbjct: 340 RMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMA---SSG------ 390
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
L+PD +TYS ++ Q + E + M G + + + LL G
Sbjct: 391 ----LEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMM 446
Query: 566 HLLEHAFDSL 575
+ FD +
Sbjct: 447 EQARNFFDEM 456
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 19/209 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P V Y ++ A + + + ++ SG++P TYG L+R
Sbjct: 111 PTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYG------------TLIRGL 158
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ +++AV +R M + G+ VY L C GRW+ V E++ S R +P
Sbjct: 159 CDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEM-SGRGIEPD 217
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT----VNAMLKVYSRNDMFSKAK 486
+ +TGLI S G + + M + EPN+ T +N+M K S + S
Sbjct: 218 VVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRN 277
Query: 487 ELFEETTRANSSGY-TFLSGDGAPLKPDE 514
+ E+ ++ Y T ++G L+ DE
Sbjct: 278 NMLEKGVALDAVTYNTLITGLSGVLEMDE 306
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/280 (18%), Positives = 110/280 (39%), Gaps = 16/280 (5%)
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
A Y + LC G DA L + ++ + ++P +++T L+ + + +
Sbjct: 78 AVSYNTVLAALCRQGGCLDAALFLLRVMA-HETRPTAVSYTTLMRALCAERRTGQAVGLL 136
Query: 456 QHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 514
+ M+ P++ T +++ KA EL E + ++P+
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESG-------------IEPNV 183
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 574
YS +L+ A +WE V++ M+ G + D + L+ R GK D
Sbjct: 184 VVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDK 243
Query: 575 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRIS 634
++E G P+ + + ++ + + ++A++L N M + + L +
Sbjct: 244 MMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLE 303
Query: 635 RDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKER 674
D+ LL + + E V + +H LC++ + R
Sbjct: 304 MDEAMGLLEEMIH-GETMVEPNVVTFNSVIHGLCKTGRMR 342
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 141/356 (39%), Gaps = 57/356 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ L +G ++A V+D + +R L+ V Y L+ + K G EA+ + N M
Sbjct: 224 LIDSLCREGKVKKATQVMDKMM----ERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNM 279
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
LE + D Y+++ L V + E + L+E M +H + ++EP++
Sbjct: 280 LEK-GVALDAVTYNTLITGLSGVLEMDEAMGLLEEM----------IH---GETMVEPNV 325
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V +N+V++ + + + F V + ++G + T+ L L+
Sbjct: 326 VTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNL------------LIGGLLRV 373
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS------ 428
K+ +A+ + M G+ + Y L C WQ V++ +SL
Sbjct: 374 HKVKKAMELMDEMASSGLEPDSFTYSILINGFCK--MWQ-----VDRAESLLSKMRRDGI 426
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
+P + + L+ + + G ++ + F M +C+ ++ + M+ R A+E
Sbjct: 427 EPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEF 486
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
+ L PD TYS ++ A + E V K M SG
Sbjct: 487 LKHMLDEG-------------LIPDSVTYSMLINMFANSGDLGAAERVLKQMTASG 529
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 72/179 (40%), Gaps = 29/179 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y LLA L + G +A F+ M ++C L D+ AY + ++ +L R
Sbjct: 433 YIPLLAALCEQGMMEQARNFFDEMHKNCKL--DVVAYST---------MIHGACRL--RD 479
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R+ + +K+M D L PD V Y+ ++N S V KQ+ SG P A
Sbjct: 480 RKSAEEFLKHM----LDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVA 535
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+ L++ + +G + + +R M + + + + + CL N
Sbjct: 536 VF------------DSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVAN 582
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 164/409 (40%), Gaps = 70/409 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +G +AM + ++++ + + Y ++A + GR +A+ FN M+
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQ---MQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMI 464
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR---------IKNMHRKN- 305
L PD Y+S+ G L + +LI M + R I ++ ++
Sbjct: 465 A-MGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGR 523
Query: 306 -------WDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+D V+ PD++ +N++++ + + F V + G++P TY
Sbjct: 524 VVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSA 583
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
++ Y R G+I++ + R M +GV T Y + L N+GR
Sbjct: 584 LLDGYCR------------NGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVG 631
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD-CISIFQHMKD-HCEPNIGTVNAM 472
A + ++ + ++I+ G+I+ + + DD I++F+ + + + NI +N M
Sbjct: 632 AKKMCHEM--IESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTM 689
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
+ + +A ELF+ +S G L P+ TY M+ E
Sbjct: 690 IDAMYKVRKREEANELFDS-----------ISATG--LVPNASTYGVMITNLLKEGSVEE 736
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
+ ++ M SGC A LL + LLE GEI
Sbjct: 737 ADNMFSLMEKSGC----------------APSSRLLNNIIRVLLEKGEI 769
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 150/408 (36%), Gaps = 64/408 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ + G +A +F+ M++ + PD+ Y S L + R
Sbjct: 230 YNTVIHGFFREGEVSKACNLFHEMMQQ-GVVPDVVTYSSYIDALCKA-----------RA 277
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K ++ M + EPD V YN +++ QWK +F+++ + GL P
Sbjct: 278 MDKAELVLRQMISNGF----EPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIF 333
Query: 351 TYGLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNM 387
T M S + VL+ + EG + + + +M
Sbjct: 334 TCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSM 393
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
E G+V SVY L G +AML+ +++ R P T+ +I + G
Sbjct: 394 EGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQE-RGVMPDAWTYGTVIAAFSRMGR 452
Query: 448 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT-----RANS---- 497
+ D + F M +P+ N++++ + + KAKEL E R N+
Sbjct: 453 LADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFN 512
Query: 498 SGYTFLSGDGAPL--------------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
S L +G + +PD T++S+++ + E V M
Sbjct: 513 SIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISV 572
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
G + D ++ LL R G+ F +L G P + + +L
Sbjct: 573 GIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIIL 620
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 126/326 (38%), Gaps = 38/326 (11%)
Query: 310 LEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSG-LKPSAATYGLAMESYRRCLLKVL 367
+EPD + Y+ VL + C S + + + ++KSG P+ +Y +
Sbjct: 186 VEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSY------------NTV 233
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
+ F+ EG++++A M Q+GVV Y LC A LV+ ++ S
Sbjct: 234 IHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMIS-NG 292
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
+P ++T+ +I G + +F+ M + P+I T N+ + ++ +A
Sbjct: 293 FEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAA 352
Query: 487 ELFEETTRAN----------------SSGYT------FLSGDGAPLKPDEYTYSSMLEAS 524
E F+ + GY F S +G + D Y+ +++A
Sbjct: 353 EFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAY 412
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
+ ++ M G D + ++ SR G+ F+ ++ G P
Sbjct: 413 GKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDT 472
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAM 610
+ + ++ + N KA LI+ M
Sbjct: 473 IVYNSLIQGFCMHGNLVKAKELISEM 498
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 118/301 (39%), Gaps = 26/301 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P + YN +++ C +H+ F +F + K+GLK + LLK L A
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANI--------LLKCLCHAK 168
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKP 430
+ +N + M + GV Y + LC + R Q A+ L+ +K P
Sbjct: 169 RSDDAVN---VLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSP 225
Query: 431 LEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+++ +I G + ++F + M+ P++ T ++ + + KA+ +
Sbjct: 226 NVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVL 285
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
+ S+G+ +PD+ TY+ M+ + QW+ +++ M G D
Sbjct: 286 RQMI---SNGF----------EPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDI 332
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
+ + GK FDS+ G P + ++ +L + + L N+
Sbjct: 333 FTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNS 392
Query: 610 M 610
M
Sbjct: 393 M 393
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/396 (19%), Positives = 158/396 (39%), Gaps = 60/396 (15%)
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+D+ +KS V+ L L KA R F +E P++ +Y+++ G
Sbjct: 171 RDRLSVKSSIVFDLLEGKLKKA-------REFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 223
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
++ ++++ MR K +EPD Y ++++ + + +F +
Sbjct: 224 IEGARRILDAMRVKG---------------IEPDSYTYGSLISGMCKEGRLEEASGLFDK 268
Query: 340 LRKSGLKPSAATYGLAME------------SYRRCLLK-----------VLVRAFWEEGK 376
+ + GL P+A TY ++ SYR ++K +LV A + EG+
Sbjct: 269 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 328
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
+ EA ++ M ++G++ A Y L G + A + ++ S + +P +T+T
Sbjct: 329 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLS-KGIEPTHVTYT 387
Query: 437 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
LI + + +F+ + D P++ NAM+ + N +A L +E R
Sbjct: 388 SLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRK 447
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
+ + PDE T++++++ + E + M G + D + L
Sbjct: 448 S-------------VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTL 494
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ R G D +L G P L + ++
Sbjct: 495 ISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALI 530
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 109/311 (35%), Gaps = 78/311 (25%)
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
D + ++ K + Y L+ + G A + N ML + P Y S+
Sbjct: 334 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSK-GIEPTHVTYTSLIYV 392
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
L + +KE L E++ D + PD++++NA+++ + +
Sbjct: 393 LSRRNRMKEADDLFEKI---------------LDQGVSPDVIMFNAMIDGHCANGNVERA 437
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
F + K++ + + P T+ M+ RC EGK+ EA + M+ RG+
Sbjct: 438 FMLLKEMDRKSVPPDEVTFNTLMQG--RC----------REGKVEEARMLLDEMKXRGI- 484
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
KP I++ LI G I D
Sbjct: 485 -----------------------------------KPDHISYNTLISGYGRRGDIKDAFX 509
Query: 454 IFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
+ M P + T NA++K +N A+EL +E + P
Sbjct: 510 VRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKG-------------ISP 556
Query: 513 DEYTYSSMLEA 523
D+ TY S++E
Sbjct: 557 DDSTYLSLIEG 567
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 153/383 (39%), Gaps = 61/383 (15%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
W+F MN G+ + E + L+K +G +A+ +L L+ K + VY L
Sbjct: 316 WQFFEKMNGKGVKWGEEVLGALIKSFCVEGLMSEALIILS---ELEKKGVSSNTIVYNTL 372
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ K+ R EA +F + ++ + P A ++ + + + + KL+ M++
Sbjct: 373 MDAYCKSNRVEEAEGLF-VEMKTKGIKPTEATFNILMYAYSRKMQPEIVEKLMAEMQETG 431
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW-VFKQLRKSGLKPSAATYG 353
L+P+ Y +++A + F +++K G+KP++ +Y
Sbjct: 432 ---------------LKPNAKSYTCIISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSY- 475
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
L+ A+ G +A AA NM++ G+ + Y L G Q
Sbjct: 476 -----------TALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQ 524
Query: 414 DAMLV-----VEKIKSLRHSKPLEITFTGLIISSMDGGHID---DCISIFQHMKDHCEPN 465
M + EK++ R +TF L+ G+ D IS F ++ H P
Sbjct: 525 TLMKIWKLMRREKVEGTR------VTFNTLVDGFAKHGYYKEARDVISKFANVGLH--PT 576
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T N ++ Y+R SK EL EE N LKPD TYS+M+ A
Sbjct: 577 VMTYNMLMNAYARGGRHSKLPELLEEMAAHN-------------LKPDSVTYSTMIYAFL 623
Query: 526 TAHQWEYFEYVYKGMALSGCQLD 548
+ + ++ M SG +D
Sbjct: 624 RVRDFSQAFFYHQEMVKSGQVMD 646
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/410 (18%), Positives = 163/410 (39%), Gaps = 55/410 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLD--WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
++ G G ++A+ ++D + GLK +R+ Y ++ +L K G+ EA ++
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLK-----PNRYTYNSIILLLCKIGKSFEAEKVLRE 353
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP------------------S 295
M+ + PD Y ++ ++G ++ K + M K
Sbjct: 354 MMSQ-KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGG 412
Query: 296 KRI--KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
K I +N+ + L+PD V Y +++ + + F + ++ + G+ P+ TYG
Sbjct: 413 KVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYG 472
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
L+ + G+++ A + M ++G+ +Y + +C G +
Sbjct: 473 ------------ALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIE 520
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAM 472
A+ ++++++ + P IT+T +I + G ID + Q M D +P + T N +
Sbjct: 521 QAIKLMKEME-VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVL 579
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
+ + M L G+ G + PD TY+++++ +
Sbjct: 580 MNGFCMLGMLEDGDRLL---------GWMLEKG----IVPDAITYNTLMKQHCIRNSMNT 626
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+YK M G D + L+ +A + ++E G +P
Sbjct: 627 TTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVP 676
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 131/332 (39%), Gaps = 68/332 (20%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G G G + ++ + K D YT L+ + KAG A + N M+
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPD---EVTYTTLIDVYCKAGEMVNAFSLHNEMV 460
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + P+I Y ++ L + G L +L++ MR+K L+ ++
Sbjct: 461 Q-MGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG---------------LQLNVC 504
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+YN+++N + + + K++ +G+ P A TY +++Y R G
Sbjct: 505 IYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL------------G 552
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
I++A ++ M RG+ T + L C G +D ++ + + P IT+
Sbjct: 553 DIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLE-KGIVPDAITY 611
Query: 436 TGLIISSMDGGHIDDCISIFQHM----------------KDHCE---------------- 463
L+ ++ I++ M K HC+
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671
Query: 464 ----PNIGTVNAMLKVYSRNDMFSKAKELFEE 491
P + + NA++K + + F +A+ELFEE
Sbjct: 672 KGYVPTVTSYNALIKRFYKKRKFXEARELFEE 703
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 65/352 (18%), Positives = 131/352 (37%), Gaps = 27/352 (7%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGK 376
YN ++ + + K + Q+ P +Y ++ Y C L G+
Sbjct: 261 YNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGY--CHL----------GE 308
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
+ +A+ + +M+ +G+ Y + LC G+ +A V+ ++ S + P + +T
Sbjct: 309 LKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMS-QKIIPDNVVYT 367
Query: 437 GLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
LI GH+ F M P+ T +++ + + + + LF E
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI-- 425
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
S G LKPDE TY+++++ A + ++ M G + + L
Sbjct: 426 -SRG----------LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGAL 474
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
+ + G+ D + + G + + M+ N E+A+ L+ M A
Sbjct: 475 IDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGI 534
Query: 616 HITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHAL 667
+T + ++ DK KLL + + + +T + L L
Sbjct: 535 DPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCML 586
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 132/365 (36%), Gaps = 77/365 (21%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
+ +Y+ + +L ++G +KE +L+ +M + S PD+V Y+ V++
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST---------------PDVVSYSTVID 301
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA 382
+ K + ++ GLKP+ TY ++ + GK EA
Sbjct: 302 GYCHLGELKKALKLMDDMQIKGLKPNRYTYN------------SIILLLCKIGKSFEAEK 349
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNG------RWQDAML------------------- 417
+R M + ++ VY L G +W D ML
Sbjct: 350 VLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFG 409
Query: 418 ----VVEKIKSLRHS------KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
V+E ++L H KP E+T+T LI G + + S+ M + PNI
Sbjct: 410 QGGKVIEP-QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNI 468
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T A++ ++ A EL +E + L+ + Y+SM+
Sbjct: 469 VTYGALIDGLCKHGELDTANELLDEMRKKG-------------LQLNVCIYNSMVNGICK 515
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
A E + K M ++G D + ++ R G +L+ G P +
Sbjct: 516 AGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVT 575
Query: 587 FTEML 591
F ++
Sbjct: 576 FNVLM 580
>gi|8778500|gb|AAF79508.1|AC002328_16 F20N2.6 [Arabidopsis thaliana]
Length = 554
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 150/379 (39%), Gaps = 47/379 (12%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+ A W G ++ R + Y L+ I + G R+ + M++D YP A
Sbjct: 210 KLAYKFFVWCGGQENFRHTAN--CYHLLMKIFAECGEYKAMCRLIDEMIKDG--YPTTAC 265
Query: 267 -YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
++ + T G+ GL +++V+ + ++ K N+ P YNA+L++ +
Sbjct: 266 TFNLLICTCGEAGLARDVVE--QFIKSKTF---------NYRPYKHS----YNAILHSLL 310
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
Q+K + WV++Q+ + G P TY + M A + GK + +
Sbjct: 311 GVKQYKLIDWVYEQMLEDGFTPDVLTYNIVM------------FANFRLGKTDRLYRLLD 358
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M + G Y L L + A+ ++ ++ + +P I FT LI
Sbjct: 359 EMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREV-GVEPGVIHFTTLIDGLSRA 417
Query: 446 GHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G ++ C + +K C P++ M+ Y KA+E+F+E T
Sbjct: 418 GKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQ------- 470
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
P+ +TY+SM+ A +++ + K M GC + ++ L+ AGK
Sbjct: 471 ------LPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGK 524
Query: 565 CHLLEHAFDSLLEAGEIPH 583
++E G H
Sbjct: 525 VLEAHEVVKDMVEKGHYVH 543
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 123/322 (38%), Gaps = 19/322 (5%)
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+L++ F E G+ + M + G TA + L C G +D + K K+
Sbjct: 234 LLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTF 293
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 484
+ +P + ++ ++ S + +++ M +D P++ T N ++ R +
Sbjct: 294 NY-RPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDR 352
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
L +E + DG PD YTY+ +L AT ++ + M G
Sbjct: 353 LYRLLDEMVK-----------DG--FSPDLYTYNILLHHLATGNKPLAALNLLNHMREVG 399
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
+ L+ SRAGK ++ D ++ G P + +T M+ I EKA
Sbjct: 400 VEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAE 459
Query: 605 ALINAM---AYAPFHITERQWTELF-ESNEDRISRDKLEKLLNALCNCNAASSEITVSNL 660
+ M P T F + + + + L+++ + CN N V+NL
Sbjct: 460 EMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNL 519
Query: 661 SRALHALCRSEKERDLSSSAHF 682
A L E +D+ H+
Sbjct: 520 KNAGKVLEAHEVVKDMVEKGHY 541
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 116/275 (42%), Gaps = 42/275 (15%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
AG+P +A+++F L + + + D+A+++++ L + +++ +L +R + S
Sbjct: 139 AGKPDKAVKLF-LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV---- 193
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY- 359
D V YN +LN + V K++ + G+ P+ TY ++ +
Sbjct: 194 ------------DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFF 241
Query: 360 -----------------RRCLLKVL-----VRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
R C + V+ V F G+I A M + GV+ + +
Sbjct: 242 RAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 301
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y + LC ++A+++ E++ R +P T+ LI G + Q
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVR-RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 360
Query: 458 MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
M++ CEPN T N M++ YS KA LFE+
Sbjct: 361 MENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK 395
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 116/297 (39%), Gaps = 41/297 (13%)
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 476
++ +++SLR P TF + G D + +F +M +H C ++ + N +L V
Sbjct: 113 LIHRMRSLRIG-PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 477 SRNDMFSKAKELFE--------ETTRANS--SGYTFLSGDGAPLK-----------PDEY 515
++ KA ELF +T N +G+ + L+ P+
Sbjct: 172 CKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 516 TYSSMLE----ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
TY++ML+ A H WE+F + K C++D + ++ AG+ +
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKK----RDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 572 FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTE-LFE 627
FD ++ G +P + M+ + N E AV + M Y P T LF
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 347
Query: 628 SNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHFGS 684
+ E + ++++ N C N + + + S SE E+ L GS
Sbjct: 348 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSEC------SEVEKALGLFEKMGS 398
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLK-DKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNL 253
+LKG G R A W + L+ KRD + V YT ++ G AG A +F+
Sbjct: 236 MLKGFFRAGQIRHA-----WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 290
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M+ + + P +A Y+++ L + ++ V + E M ++ EP+
Sbjct: 291 MIRE-GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG---------------YEPN 334
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
+ YN ++ + ++ + +++ G +P+ TY + + Y C
Sbjct: 335 VTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSEC 383
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 167/415 (40%), Gaps = 67/415 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+KGL KG ++ + D V + + S Y LL L K G A+++ M+
Sbjct: 86 LMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVS---YGTLLNGLCKTGETRCAIKLLR-MI 141
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
ED + P++ Y ++ L + L+ E L M + + P+++
Sbjct: 142 EDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDARE---------------IFPNVI 186
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN ++ A + Q G F + ++ + P T+ +L+ A +EG
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTF------------SILIDALCKEG 234
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
K A M Q GV Y + LC R +AM ++ ++ ++ P +T+
Sbjct: 235 K--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLH-KNMVPDTVTY 291
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
LI G I +++ M +P ++ T ++L +N KA LF +
Sbjct: 292 NSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 351
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
++P YTY+++++ + + + +++ + + GC +D +
Sbjct: 352 RG-------------IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTV 398
Query: 555 LLVEASRAGKCHLLEHAFDSLL-------EAGEIPHPLFFTEMLIQAIVQSNYEK 602
++ +G C E FD L + G IP+ + F + I++S +EK
Sbjct: 399 MI-----SGLCK--EGMFDEALAIKSKMEDNGCIPNAVTF-----EIIIRSLFEK 441
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 118/280 (42%), Gaps = 34/280 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ ++ L+ L K G+ A +IF+ M++ + P++ +Y+ + L + + E + L+
Sbjct: 221 YTFSILIDALCKEGK--NAKQIFHAMVQM-GVNPNVYSYNIMINGLCKCKRVDEAMNLLR 277
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M K NM PD V YN++++ S + + ++ G
Sbjct: 278 EMLHK------NM---------VPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPAD 322
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY L+ A + +++A A M++RG+ T Y L LC
Sbjct: 323 VVTY------------TSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCK 370
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
GR ++A + + + L +++ T+T +I G D+ ++I M+D+ C PN
Sbjct: 371 GGRLKNAQELFQHL--LVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNA 428
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
T +++ D KA++L E G+ G+
Sbjct: 429 VTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLGFRNFHGE 468
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/409 (20%), Positives = 164/409 (40%), Gaps = 48/409 (11%)
Query: 196 LLKGLGDKGSWRQAMSVL-DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
L++ L +G +A+ V+ D + G ++ + Y L+A +AG A R+ +M
Sbjct: 160 LVRALCARGQREEALGVVGDDMRGAGCAPNVVT---YNTLVAAFCRAGEVDAAERLVGVM 216
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E + P + +++V L + G +++ K+ + M ++ L PD
Sbjct: 217 REG-GVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREG---------------LTPDG 260
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V YN +++ + VF ++ + G+ P T+ L+ A
Sbjct: 261 VSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTF------------TSLIHAMCRA 308
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
G + AVA V M +RG+ + L C NG DA+L +++++ R +P +
Sbjct: 309 GNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECR-IQPSVVC 367
Query: 435 FTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+ LI G +D+ + M+ +P++ T + +L Y + FE
Sbjct: 368 YNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCK---IGDTDSAFELNR 424
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
+ G PD TYSS++ + +++ M G Q D+ +
Sbjct: 425 KMLKKGVV----------PDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYT 474
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
L+ + G D +++ G +P + ++ +LI + +S K
Sbjct: 475 TLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYS-VLIDGLSKSARTK 522
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 64/167 (38%), Gaps = 13/167 (7%)
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
C PN+ T N ++ + R A+ L ++P T+++++
Sbjct: 186 CAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGG-------------VRPSLVTFNTVV 232
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
A + E ++ MA G D + L+ +AG H F + + G +
Sbjct: 233 NGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVV 292
Query: 582 PHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
P + FT ++ N E+AVAL+ M + E +T L +
Sbjct: 293 PDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDG 339
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 144/359 (40%), Gaps = 46/359 (12%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R+ + L K G+ EA F+L+ E + PD Y+ + L + L +E + ++
Sbjct: 246 RYTLSCFAYSLCKGGKCREA---FDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDIL 302
Query: 288 ERMRQKPS--------------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
RMR R K + P+ ++N++++A S
Sbjct: 303 HRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKS 362
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV-AAVRN 386
+ + +FK++ K G +P Y + + S V I + V A
Sbjct: 363 RDYSYAYKLFKKMIKCGCQPGYLVYNIFIGS-------VCSNEEQPSSDILDLVEKAYSE 415
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
M GVV A CLC G++ A ++ ++ + P + T++ +I D
Sbjct: 416 MLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMG-KGFVPDDSTYSKVIGFLCDAS 474
Query: 447 HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
++ S+F+ MK + P++ T ++ + + + +A++ F+E +
Sbjct: 475 KVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCT------- 527
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
P+ TY++++ A A Q + +++ M L GC+ + + L+ +AG+
Sbjct: 528 ------PNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQ 580
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 115/278 (41%), Gaps = 44/278 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLML-----EDCNLY----------PDIAAYHSVAVTL 274
YT L+ KAG+ +A +I+ M D + Y P++ Y ++ L
Sbjct: 567 TYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGL 626
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ +KE +L++ M EP+ +VY+AV++ + +
Sbjct: 627 CKANRVKEAHELLDTMLAHGC---------------EPNQIVYDAVIDGFCKIGKLQDAQ 671
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
VF ++ + G P+ TY S+ CL K + +++ + + M +
Sbjct: 672 EVFTKMSERGYSPNLYTYS----SFIDCLFK--------DNRLDLVLKVLSKMLENSCTP 719
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
+Y E+ LC G+ +A ++ K++ + P +T+T +I G I+ C+ +
Sbjct: 720 NVVIYTEMVDGLCKIGKTDEAYKLMLKMEE-KGCNPNVVTYTAMIDGFGKSGKIEQCLEL 778
Query: 455 FQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
F+ M C PN T ++ N + +A +L +E
Sbjct: 779 FRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDE 816
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 79/440 (17%), Positives = 157/440 (35%), Gaps = 76/440 (17%)
Query: 185 GLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
G++ + + + L G + QA ++ + G K + Y+K++ L A +
Sbjct: 420 GVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMG---KGFVPDDSTYSKVIGFLCDASKV 476
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
+A +F M + + P + Y + + + GL+++ K + M K
Sbjct: 477 EKAFSLFEEMKRN-GIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCT-------- 527
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY----- 359
P++V Y A+++A + + Q +F+ + G KP+ TY ++ +
Sbjct: 528 -------PNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQ 580
Query: 360 --RRCLL--------------------------------KVLVRAFWEEGKINEAVAAVR 385
+ C + LV + ++ EA +
Sbjct: 581 IEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLD 640
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M G VY + C G+ QDA V K+ S R P T++ I
Sbjct: 641 TMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKM-SERGYSPNLYTYSSFIDCLFKD 699
Query: 446 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+D + + M ++ C PN+ M+ + K E ++ + G
Sbjct: 700 NRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCK---IGKTDEAYKLMLKMEEKG----- 751
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
P+ TY++M++ + + E +++ M GC + + L+ G
Sbjct: 752 -----CNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNG- 805
Query: 565 CHLLEHAFDSLLEAGEIPHP 584
LL+ A+ L E + P
Sbjct: 806 --LLDEAYKLLDEMKQTYWP 823
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 117/297 (39%), Gaps = 43/297 (14%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD Y+ V+ + + + F +F++++++G+ PS TY +L+ +F
Sbjct: 458 PDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTY------------TILIDSF 505
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ G I +A M +G Y L + A + E + L KP
Sbjct: 506 CKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFE-MMLLEGCKPN 564
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMK--------------DH--CE-PNIGTVNAMLK 474
+T+T LI G I+ I+ M+ DH CE PN+ T A++
Sbjct: 565 VVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVD 624
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
+ + +A EL +T A+ +P++ Y ++++ + + +
Sbjct: 625 GLCKANRVKEAHELL-DTMLAHGC------------EPNQIVYDAVIDGFCKIGKLQDAQ 671
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
V+ M+ G + ++ + + + L+ +LE P+ + +TEM+
Sbjct: 672 EVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMV 728
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/230 (18%), Positives = 84/230 (36%), Gaps = 29/230 (12%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N ++ C + W +L+ G KPS TY L++ F K+
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTY------------NALIQVFLRADKL 227
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+ A R M V A LC G+ ++A ++++ + P + +
Sbjct: 228 DTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDF---VPDTVFYNR 284
Query: 438 LIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
++ + ++ + I M+ C PN+ T +L R + K +
Sbjct: 285 MVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRIL------- 337
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
+ + +G P+ ++S++ A + + Y ++K M GCQ
Sbjct: 338 ----SMMITEGC--YPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQ 381
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 103/259 (39%), Gaps = 48/259 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ GL ++A +LD + +G + ++ VY ++ K G+ +A +F
Sbjct: 622 LVDGLCKANRVKEAHELLDTMLAHGCE-----PNQIVYDAVIDGFCKIGKLQDAQEVFTK 676
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M E P++ Y S L + L ++K++ +M + P+
Sbjct: 677 MSER-GYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCT---------------PN 720
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
+V+Y +++ + + + ++ + G P+ TY ++ F +
Sbjct: 721 VVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTY------------TAMIDGFGK 768
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS-------LR 426
GKI + + R+M +G Y L C+NG +A +++++K L
Sbjct: 769 SGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILS 828
Query: 427 HSKPLE------ITFTGLI 439
H K +E IT GL+
Sbjct: 829 HRKIIEGFSQEFITSIGLL 847
>gi|356544435|ref|XP_003540656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Glycine max]
Length = 1071
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 145/374 (38%), Gaps = 41/374 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P L +N +++ C S +G F V + L+ + L+P Y L+
Sbjct: 437 PMLSTFNMLMSVCASSQDSEGAFQVLQLLKDARLEPDCKLY------------TTLILTC 484
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ GK++ M GV Y L G+ A ++S ++ KP
Sbjct: 485 AKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIGGCARAGQVAKAFGAYGIMRS-KNVKPD 543
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDHCE---PNIGTVNAMLKVYSRNDMFSKAKEL 488
+ F LI + G +D + M + P+ T+ A+LK ++ +A+E+
Sbjct: 544 RVVFNALIAACAQSGAVDRAFDVLAEMAAETQPIDPDHVTIGALLKACTKAGQVERAQEV 603
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
++ + N G P+ YT + + + + WEY VY M G D
Sbjct: 604 YKMVQKYNIKGC-----------PEVYTIA--INSCSQTGDWEYARTVYNDMTQKGILPD 650
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEA--GEIPHPLFFTEMLIQAIVQS-NYEKAVA 605
+ + L+ A A K L+ AFD L EA G I + L+ A + N++KA+
Sbjct: 651 EIFLSALIDVAGHAKK---LDAAFDVLQEAHKGGIQIGIMSYSSLMGACSNARNWQKALE 707
Query: 606 LINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALH 665
L + IT L + D K ++L + + + IT S L
Sbjct: 708 LYEYLKSLKLTITVSTVNALLTALCDGDQFQKALEVLFEMKGLGLSPNSITFSIL----- 762
Query: 666 ALCRSEKERDLSSS 679
+ SEK+ D+ ++
Sbjct: 763 -IVASEKKDDMEAA 775
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 123/343 (35%), Gaps = 78/343 (22%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
LKD R +YT L+ K+G+ +F+ M+ + + P++ Y ++ + G
Sbjct: 465 LKDARLEPDCKLYTTLILTCAKSGKVDLMFEVFHKMV-NSGVEPNVHTYGALIGGCARAG 523
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ + MR SK +K PD VV+NA++ AC S F V
Sbjct: 524 QVAKAFGAYGIMR---SKNVK------------PDRVVFNALIAACAQSGAVDRAFDVLA 568
Query: 339 QL--RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
++ + P T G L++A + G++ A + +++ + G
Sbjct: 569 EMAAETQPIDPDHVTIG------------ALLKACTKAGQVERAQEVYKMVQKYNIKGCP 616
Query: 397 SVYYELACCLCNNGRWQ----------------DAMLVVEKIKSLRHSKPLEITF----- 435
VY G W+ D + + I H+K L+ F
Sbjct: 617 EVYTIAINSCSQTGDWEYARTVYNDMTQKGILPDEIFLSALIDVAGHAKKLDAAFDVLQE 676
Query: 436 ---TGLIISSMDGGHI----------DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDM 481
G+ I M + + +++++K + TVNA+L D
Sbjct: 677 AHKGGIQIGIMSYSSLMGACSNARNWQKALELYEYLKSLKLTITVSTVNALLTALCDGDQ 736
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
F KA E+ E G L P+ T+S ++ AS
Sbjct: 737 FQKALEVLFEM-------------KGLGLSPNSITFSILIVAS 766
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 147/374 (39%), Gaps = 51/374 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G KG +Q +V L+D ++ Y L+ +AG ++ M
Sbjct: 323 LLGGYSRKGQLQQIDTVKTL---LRDTGMSINKITYCLLIDAYARAGLMDRLEALYQEM- 378
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNM----------- 301
DC++ P+ Y + G ++ VKL+ M+Q P + N+
Sbjct: 379 RDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQL 438
Query: 302 ------HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
K D +EPD+V +N++++AC + Q ++ ++ G P+A T+
Sbjct: 439 EQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQTF--- 495
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+++ E + N+ V M +G+ Y L +QDA
Sbjct: 496 ---------NIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDA 546
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 474
+ ++ +K P ++ L + G + + + Q M K++ E N+ +N ++
Sbjct: 547 VECLQTMKE-DGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLLIN 605
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
+S +A +FE A L D+ TY+++++A A + +
Sbjct: 606 AFSMAGRSQEAFAVFEYIKEAG-------------LTADKITYTTLMKALIRAEKLDEVS 652
Query: 535 YVYKGMALSGCQLD 548
V+ M +GC+ D
Sbjct: 653 GVFDEMIKAGCRPD 666
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 166/424 (39%), Gaps = 56/424 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VY L+ G+A +P+E + F L+ L D +Y S+ ++LG+ G E L+E
Sbjct: 249 VYNDLIFACGQAHKPNEGM-FFLEKLQASGLVADRDSYISLMLSLGKHGRTAEAEALLEE 307
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ W L P+L YN +L Q + + V LR +G+ +
Sbjct: 308 MK--------------WYG-LRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINK 352
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEE-----------------------GKINEAVAAVRN 386
TY L +++Y R L + A ++E G+ + V +R
Sbjct: 353 ITYCLLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLRE 412
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
M+Q GV A VY + + + A + K++ +P +++ LI + G
Sbjct: 413 MQQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQD-GGIEPDVVSWNSLIDACCKAG 471
Query: 447 HIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
+ ++ M D C P T N ++ + ++ E+ EE S G
Sbjct: 472 QPLEARKLYYKMVNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEM---RSKG------ 522
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
+ P+ TY+++++ A A ++ + M G T ++ L ++ G C
Sbjct: 523 ----MFPNVVTYTTLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMC 578
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAI-VQSNYEKAVALINAMAYAPFHITERQWTE 624
H + +E I L +LI A + ++A A+ + A + +T
Sbjct: 579 EQTLHVLQT-MEKENIEINLAMLNLLINAFSMAGRSQEAFAVFEYIKEAGLTADKITYTT 637
Query: 625 LFES 628
L ++
Sbjct: 638 LMKA 641
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 105/263 (39%), Gaps = 44/263 (16%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++ D VYN ++ AC +H+ + ++L+ SGL +Y L+
Sbjct: 243 VQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQASGLVADRDSY------------ISLML 290
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+ + G+ EA A + M+ G+ Y L G+ Q ++ +K+L
Sbjct: 291 SLGKHGRTAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQ----IDTVKTLLRDT 346
Query: 430 PL---EITFTGLIISSMDGGHIDDCISIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFSK 484
+ +IT+ LI + G +D +++Q M+D C+ PN M+ +Y + K
Sbjct: 347 GMSINKITYCLLIDAYARAGLMDRLEALYQEMRD-CDIRPNTYMYARMITIYRDTGQWQK 405
Query: 485 AKELFEETTRA-------------NSSGYT---------FLSGDGAPLKPDEYTYSSMLE 522
+L E +A N+ G T F ++PD +++S+++
Sbjct: 406 GVKLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLID 465
Query: 523 ASATAHQWEYFEYVYKGMALSGC 545
A A Q +Y M GC
Sbjct: 466 ACCKAGQPLEARKLYYKMVNDGC 488
>gi|115452873|ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group]
gi|108708021|gb|ABF95816.1| expressed protein [Oryza sativa Japonica Group]
gi|113548508|dbj|BAF11951.1| Os03g0336000 [Oryza sativa Japonica Group]
gi|125543773|gb|EAY89912.1| hypothetical protein OsI_11461 [Oryza sativa Indica Group]
gi|215712300|dbj|BAG94427.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 545
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 146/357 (40%), Gaps = 46/357 (12%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR---------CLLKVL 367
YN +L+A + +F+ LR +G+ P A +Y A++ R L +++
Sbjct: 131 YNDILSALAMAGDHDSAVALFRALRPNGVTPDAQSYATAVQCLCRKGAPDEAKEALDEMV 190
Query: 368 VRAF--------------WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
R F + G++ A+ M G T Y L LC GR +
Sbjct: 191 ARGFRPTVATFSAVVGCLCKRGRVTRAMEVFDTMRAVGCEPTIRTYNSLIGGLCYVGRLE 250
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAM 472
+A+ ++ K+K P TFT ++ G D+ IF +++ P I T NA+
Sbjct: 251 EALDLLNKLKESPKQTPDIYTFTIVLDGFCKVGRTDEATPIFHDAVRNGLSPTIFTYNAL 310
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS----SMLEASATAH 528
L + + KA L E + G+ A PD ++S ++L A T+
Sbjct: 311 LNGHCKEGNPLKAYSLLME-----------MCGNAA-CPPDRISFSIVLQALLRAGETSA 358
Query: 529 QWEYFEYVYK-GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
W+ ++ + + G G LD A+ F L+ +G P+ +
Sbjct: 359 AWQAYKRMERAGFEADGRALDTLARGLCRQCAANVAALADAREVFGKLVASGH--EPVSY 416
Query: 588 TEMLI-QAIVQSN-YEKAVALINAMAYAPFHITERQWTELFESNEDRI-SRDKLEKL 641
T L+ QA+ + + AV+L+ MA + + +R +T++ + +R +RD L L
Sbjct: 417 TYCLMAQALARGGEVDAAVSLLGEMARRGYALRKRAYTDVVRALCERGRARDALRVL 473
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 121/327 (37%), Gaps = 59/327 (18%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M G T ++ L +G +AM V D + + + +++ Y L+ L
Sbjct: 189 MVARGFRPTVATFSAVVGCLCKRGRVTRAMEVFDTMRAVGCEPTIRT---YNSLIGGLCY 245
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI-ERMRQKPSKRI- 298
GR EAL + N + E PDI + V +VG E + + +R S I
Sbjct: 246 VGRLEEALDLLNKLKESPKQTPDIYTFTIVLDGFCKVGRTDEATPIFHDAVRNGLSPTIF 305
Query: 299 -----KNMHRKNWDPV--------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
N H K +P+ PD + ++ VL A + + + + +K+
Sbjct: 306 TYNALLNGHCKEGNPLKAYSLLMEMCGNAACPPDRISFSIVLQALLRAGETSAAWQAYKR 365
Query: 340 LRKSGLKPSAATY-----GLAME--------------------------SYRRCLLKVLV 368
+ ++G + GL + SY CL +
Sbjct: 366 MERAGFEADGRALDTLARGLCRQCAANVAALADAREVFGKLVASGHEPVSYTYCL---MA 422
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
+A G+++ AV+ + M +RG Y ++ LC GR +DA+ V+ + + R
Sbjct: 423 QALARGGEVDAAVSLLGEMARRGYALRKRAYTDVVRALCERGRARDALRVLALVIA-RDF 481
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIF 455
P F L+ G D ++++
Sbjct: 482 VPGRNAFDALLGELARQGRWPDAMAVY 508
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 150/394 (38%), Gaps = 66/394 (16%)
Query: 225 LKSRFV------YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+KSR V +T L+ +AG EA+ FN M ED PD A+ V L +
Sbjct: 177 MKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM-EDYGCVPDQIAFSIVISNLSRKR 235
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
E + ++ + EPD++VY ++ + + VFK
Sbjct: 236 RASEAQSFFDSLKDR----------------FEPDVIVYTNLVRGWCRAGEISEAEKVFK 279
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
++ +G++P+ TY + +++ RC G+I+ A +M G A
Sbjct: 280 DMKLAGIEPNVYTYSIVIDALCRC------------GQISRAHDVFADMLDSGCAPNAIT 327
Query: 399 YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
+ L GR + + V ++K L +P IT+ LI + ++++ + + M
Sbjct: 328 FNNLMRVHVKAGRPEKVLQVYNQMKKL-GCEPDTITYNFLIETHCRDENLENAVKVLNTM 386
Query: 459 -KDHCEPNIGTVNAMLK-------VYSRNDMFSKAKELFEETTRANSSGYTFL------- 503
K CE N T N + + V + M+SK + E N+ Y L
Sbjct: 387 IKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSK---MMEAKCEPNTVTYNILMRMFAGS 443
Query: 504 -----------SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ-TK 551
D ++P+ TY ++ W ++K M C +
Sbjct: 444 KSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSL 503
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+ +L + RAG+ E + +++ G + PL
Sbjct: 504 YEMVLAQLRRAGQLKKHEELVEKMIQKGLVTRPL 537
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 113/272 (41%), Gaps = 32/272 (11%)
Query: 425 LRHSKPLEI---TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRND 480
L S+ +EI TFT LI + G + + F M+D+ C P+ + ++ SR
Sbjct: 176 LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKR 235
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
S+A+ F+ +PD Y++++ A + E V+K M
Sbjct: 236 RASEAQSFFDSLKDR--------------FEPDVIVYTNLVRGWCRAGEISEAEKVFKDM 281
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY 600
L+G + + ++ ++ R G+ F +L++G P+ + F ++ +
Sbjct: 282 KLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRP 341
Query: 601 EKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL----CNCNAASSEIT 656
EK + + N M + L E++ + + K+LN + C NA+ T
Sbjct: 342 EKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNAS----T 397
Query: 657 VSNLSRALHALCRSEKERDLSSSAHFGSQAID 688
+ + R + EK+RD++ + S+ ++
Sbjct: 398 FNTIFRYI------EKKRDVNGAHRMYSKMME 423
>gi|224089100|ref|XP_002308636.1| predicted protein [Populus trichocarpa]
gi|222854612|gb|EEE92159.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 113/288 (39%), Gaps = 39/288 (13%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
DP P + +YN +LN S + K ++ +++K +KPS TYG +E Y R
Sbjct: 254 DPCWVPSVRIYNILLNGWFRSRKLKHAERLWLEMKKKNVKPSVVTYGTLVEGYSRM---- 309
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
++ A+ V M++ G+ A VY + L GR+++ + ++E L
Sbjct: 310 --------RRVERAIELVDEMKREGIKSNAIVYNPIIDALAEAGRFKEVLGMMEHF-FLC 360
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
P T+ L+ G + I + M P T N + +S+ +
Sbjct: 361 EEGPTISTYNSLVKGYCKAGDLVGASKILKMMISREVFPTPTTYNYFFRHFSKCRKIEEG 420
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
L+ T+ SGYT PD TY +L+ + + + K M GC
Sbjct: 421 MNLY---TKMIESGYT----------PDRLTYHLLLKMLCEEERLDLAVQISKEMRARGC 467
Query: 546 QLD---QTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHPLFF 587
+D T LL + R E A F+ +L G +P L F
Sbjct: 468 DMDLATSTMFTHLLCKMQR------FEEAFAEFEDMLRRGIVPQYLTF 509
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 115/287 (40%), Gaps = 33/287 (11%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P L +N +L+ + VF ++ Q+R SGL S RC L +L+
Sbjct: 67 PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGL------------SSDRCTLNILLNCL 114
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
++ E AA + +RG Y L LC R +A + +++ L P
Sbjct: 115 CNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG-CTPD 173
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKD-------HCEPNIGTVNAMLKVYSRNDMFSK 484
+T+ LI G+I+ + + Q M + +C+PN+ T N ++ + +
Sbjct: 174 VVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDE 233
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
AK+LFEE + P +Y+S++ A +WE + + M G
Sbjct: 234 AKQLFEEMKTQG-------------MIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQG 280
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
Q D L+ + GK + ++E+G +P + + ++
Sbjct: 281 LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLI 327
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 157/387 (40%), Gaps = 50/387 (12%)
Query: 148 EKRWRSEAEAIRVLVDRLSE--REMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGS 205
E + ++VD L + RE AK + M G++ + L+ G G
Sbjct: 208 EINCKPNVITYNIIVDGLCKVGREDEAK--QLFEEMKTQGMIPSIISYNSLIHGFCCAGK 265
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
W ++ +LD + + D+ + + L+ L K G+ EA ++ +M+E + PD+
Sbjct: 266 WEESKRLLDEMLDQGLQPDMVT---FNVLIDTLCKEGKVIEAKKLLGVMIES-GIVPDLV 321
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y+S+ VG L +L M PSK EPD++ YN ++N
Sbjct: 322 TYNSLIEGFCMVGDLNSARELFVSM---PSKGC------------EPDVISYNVLINGYS 366
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
+ + + ++ ++ G +P+ TY L++ + GK+++A
Sbjct: 367 KTLKVEEAMKLYNEMLLVGKRPNVITY------------DSLLKGIFLAGKVDDAKKLFS 414
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M+ G+ + Y LC N +AM + ++KS +E LI
Sbjct: 415 VMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIE-NLNCLIDGLCKA 473
Query: 446 GHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G ++ +F+ + + EPN+ T M+ + R KA L + + ++G T
Sbjct: 474 GKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQ---KMEANGCT--- 527
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWE 531
PD TY++++ +++ E
Sbjct: 528 -------PDIITYNTLMRGFYESNKLE 547
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 144/369 (39%), Gaps = 38/369 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P++V YN ++ H+ +F +++K G P TYG L++
Sbjct: 137 PNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYG------------TLIKGL 184
Query: 372 WEEGKINEAVAAVRNM------EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
G IN A+ + M + Y + LC GR +A + E++K+
Sbjct: 185 CGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKT- 243
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
+ P I++ LI G ++ + M D +P++ T N ++ + +
Sbjct: 244 QGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIE 303
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
AK+L G SG + PD TY+S++E ++ M G
Sbjct: 304 AKKLL---------GVMIESG----IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG 350
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
C+ D + L+ S+ K ++ +L G+ P+ + + +L + + A
Sbjct: 351 CEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAK 410
Query: 605 ALINAMAYAPFHITERQWTELFESNEDRISR-DKLEKLLNALCNCNAASSEITVSNLSRA 663
L + M I E +T + D + + D L + + +++ ++ + NL+
Sbjct: 411 KLFSVM--KAHGIAENSYT--YGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCL 466
Query: 664 LHALCRSEK 672
+ LC++ K
Sbjct: 467 IDGLCKAGK 475
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 98/474 (20%), Positives = 191/474 (40%), Gaps = 83/474 (17%)
Query: 146 HPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGS 205
HP + R EA+ +L+D S R MN L+ ++ GL G
Sbjct: 88 HPLCKARLLDEAMGLLLDMKS------------RGMNPGTLLHN-----VVIGGLCRAGR 130
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
R A+ V Y + YTKL+ L KAGR +A+++ M+ ++ PD
Sbjct: 131 LRHALGV----YRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHV-PDNT 185
Query: 266 AYHSV--AVTLG-QVGLLKELVKLI----------------------ERMRQKPSKRIKN 300
V ++ LG +V +ELV+ + ER+ + + +
Sbjct: 186 TLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGE 245
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+ R+ + PD+V Y+ V++ + + + +F+++ + P+A TY
Sbjct: 246 VTRRGF----TPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCA---PTAITY-------- 290
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
L+ + G ++EA+ + M Y L C GR DA + +
Sbjct: 291 ----NSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQ 346
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRN 479
++ + + S P +TFT L+ G ++D + + + + + C P I T N ++ Y ++
Sbjct: 347 QMVANKLS-PDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKS 405
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW-EYFEYVYK 538
+ KA+EL + S G+ P+ TY+ ++ A + + +Y+ +
Sbjct: 406 NQVRKAEELVADF---RSRGFV----------PNTVTYNILVAGCCRAGRTDQALQYLDQ 452
Query: 539 GMALSG-CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ G C +A +L R G+ ++ +++ G +P F ++
Sbjct: 453 LNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVV 506
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/321 (19%), Positives = 116/321 (36%), Gaps = 79/321 (24%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G +A+ +L + D YT L++ K GR +A +F M+
Sbjct: 293 LIGGYCRAGDMDEAIRLLGK---MVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMV 349
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ L PD+ + S+ L G +++ ++L+E + ++ P +
Sbjct: 350 AN-KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCP---------------PTIY 393
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-------------- 361
YN V++ S+Q + + R G P+ TY + + R
Sbjct: 394 TYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQL 453
Query: 362 ------C-----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
C + +++ A +G+ ++AV M QRG V A+ + + LC
Sbjct: 454 NSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAH 513
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVN 470
+ Q A ++E++ H+ P GT +
Sbjct: 514 QPQQAHELLEEMIKYGHT-----------------------------------PGPGTCD 538
Query: 471 AMLKVYSRNDMFSKAKELFEE 491
A++ Y R M KA EL E
Sbjct: 539 AVVSAYCRAGMIQKADELASE 559
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 34/249 (13%)
Query: 264 IAAYHSVAVTLGQVGLLKELVKLIER-MRQKPSKRIKNM------HRKNWDPVLE----- 311
I++ ++ V QV L+++L+ +R + KP+ I N+ R + D E
Sbjct: 240 ISSCLNLLVDSNQVDLVRKLLLYAKRSLVYKPNVCIFNILVKYHCRRGDIDSAFEVVKEM 299
Query: 312 -------PDLVVYNAVLNACVPSHQWKGVFWVFKQL-RKSGLKPSAATYGLAMESYRRCL 363
P+++ Y+ +++ + + K F +F+++ K + P TY
Sbjct: 300 RNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYN---------- 349
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
VL+ F EGK + A + M+ G Y L LC G+ QDA V+ ++K
Sbjct: 350 --VLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMK 407
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMF 482
S KP IT+T LI G ID+ I + MK++ C+ + T N +L R F
Sbjct: 408 S-SGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRF 466
Query: 483 SKAKELFEE 491
+A ++ E+
Sbjct: 467 DEALDMIEK 475
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 146/364 (40%), Gaps = 50/364 (13%)
Query: 226 KSRFVYTKL-LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
KS+++ + + ++ + P AL+IFN++ E + A Y ++ L Q + +
Sbjct: 127 KSKYITHDVAINLIKREKDPQHALKIFNMVSEQKGFNHNNATYATILQKLAQFKKFQAVD 186
Query: 285 KLIERMRQKPSKRIKNM-------------HRKNWDPVLEPDLVV--------YNAVLNA 323
+++ +M + K + + H K +D L +V ++ LN
Sbjct: 187 RVLHQMTYEACKFHEGVFINLMKHYSKCGFHEKVFDAFLSIQTIVREKPSPKAISSCLNL 246
Query: 324 CVPSHQWKGVFWVFKQLRKSGL-KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA 382
V S+Q V + ++S + KP+ C+ +LV+ G I+ A
Sbjct: 247 LVDSNQVDLVRKLLLYAKRSLVYKPNV------------CIFNILVKYHCRRGDIDSAFE 294
Query: 383 AVRNMEQ-RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
V+ M + Y L LC NGR ++A + E++ S P +T+ LI
Sbjct: 295 VVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLING 354
Query: 442 SMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
G D ++ + MK++ C PN+ +A++ + AK + E SSG
Sbjct: 355 FCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEM---KSSG- 410
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEAS 560
LKPD TY+S++ + Q + + M + CQ D +L
Sbjct: 411 ---------LKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLC 461
Query: 561 RAGK 564
R G+
Sbjct: 462 REGR 465
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 80/193 (41%), Gaps = 27/193 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ L+ L + GR EA +F M+ + PD Y+ + + G +IE
Sbjct: 311 TYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIEF 370
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ P++ Y+A+++ + + + V +++ SGLKP A
Sbjct: 371 MKNNGCC---------------PNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDA 415
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L+ F G+I+EA+ + M++ + + LC
Sbjct: 416 ITY------------TSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCRE 463
Query: 410 GRWQDAMLVVEKI 422
GR+ +A+ ++EK+
Sbjct: 464 GRFDEALDMIEKL 476
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 14/184 (7%)
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHMKD--HCEPNIGTVNAMLKVYSRNDMFSKAK 486
KP F L+ G ID + + M++ + PN+ T + ++ RN +A
Sbjct: 270 KPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAF 329
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
ELFEE + + PD TY+ ++ + + V + M +GC
Sbjct: 330 ELFEEMVSKDQ------------IVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCC 377
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
+ ++ L+ +AGK + + +G P + +T ++ ++A+ L
Sbjct: 378 PNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIEL 437
Query: 607 INAM 610
+ M
Sbjct: 438 LTEM 441
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 125/302 (41%), Gaps = 29/302 (9%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+PD+ Y ++N + + K++ + G +P TY L+ +
Sbjct: 193 QPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTY------------STLIDS 240
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
++ +NEA+ M+ +G+ T Y L LC+ RW++A ++ ++ SL + P
Sbjct: 241 LCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSL-NIMP 299
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+TF+ LI G++ + + + M + EPN+ T N+++ YS +A++LF
Sbjct: 300 DIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLF 359
Query: 490 E-ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+ TR KPD ++YS ++ + + + ++ M G +
Sbjct: 360 DVMITRG--------------CKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPN 405
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
+ L+ + GK F + G +P ++ +L Q KA L
Sbjct: 406 TVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFR 465
Query: 609 AM 610
AM
Sbjct: 466 AM 467
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 142/352 (40%), Gaps = 38/352 (10%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + + + M G+ T L++GL W++A ++L+ + L
Sbjct: 237 LIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN 296
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D+ + ++ L+ I K G EA + M E + P++ Y+S+ +
Sbjct: 297 IMPDIVT---FSLLIDIFCKEGNVLEAQGVLKTMTE-MGVEPNVITYNSLMHGYSLQMEV 352
Query: 281 KELVKLIERMRQ---KPS--------------KRI---KNMHRKNWDPVLEPDLVVYNAV 320
E KL + M KP KRI K + + L P+ V Y +
Sbjct: 353 VEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTL 412
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA 380
++A + + +FK + +G P TY VL+ F ++G + +A
Sbjct: 413 IHAFCQLGKLREARELFKDMHTNGYLPDLCTY------------SVLLEGFCKQGYLGKA 460
Query: 381 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 440
R M+ + +Y L +C +G A + ++ + +P +T +I
Sbjct: 461 FRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSEL-FVHGLQPDVQIYTTIIN 519
Query: 441 SSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
G +D+ + F+ M +D C PN + N +++ + ++ S+A +L E
Sbjct: 520 GLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGE 571
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/401 (16%), Positives = 158/401 (39%), Gaps = 33/401 (8%)
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQW-KGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+HRK P+ P ++ +N +L+A V Q+ V + KQ+ +GL P+
Sbjct: 82 LHRK---PL--PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNT---------- 126
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
C L +L+ F ++ + + + + G+ T + L LC G + A+ +
Sbjct: 127 --CTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELF 184
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSR 478
+ + + R +P T+T +I G + + M + C+P++ T + ++ +
Sbjct: 185 DDMVA-RGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCK 243
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
+ + ++A ++F +++ G + P +Y+S+++ + +W+ +
Sbjct: 244 DRLVNEALDIF-----------SYMKAKG--ISPTVVSYTSLIQGLCSFSRWKEASAMLN 290
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
M D + L+ + G + ++ E G P+ + + ++ +Q
Sbjct: 291 EMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQM 350
Query: 599 NYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVS 658
+A L + M ++ L D+ ++L N + + + ++ +
Sbjct: 351 EVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYT 410
Query: 659 NLSRALHALCRSEKERDLSSSAHFGSQAIDISPLHGIHEAF 699
L A L + + R+L H D+ + E F
Sbjct: 411 TLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGF 451
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 144/337 (42%), Gaps = 44/337 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL G +A+ +L + G D+ + Y L+ K+ +A +F+ +
Sbjct: 212 LIRGLCGVGKAEKAVELLGGMSGFGCLPDIVT---YNTLIKGFCKSNELKKANEMFDDVK 268
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE---RMRQKPSKRIKNMHRKNWDPVLE- 311
PD+ Y S+ + G ++E L++ R+ P+ N+ + E
Sbjct: 269 SSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 312 ----------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
PD+V + ++++ Q F +++++ G+ P+A TY
Sbjct: 329 HTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTY--- 385
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+L+ A +E ++ +A + + + ++ +Y + C G+ +A
Sbjct: 386 ---------SILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 474
+++VE+++ + KP +ITFT LII G + + +SIF M C P+ TV+++L
Sbjct: 437 IVIVEEMEK-KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 511
+ M +A L N + DGAPL+
Sbjct: 496 CLLKAGMAKEAYHL-------NQIAHKGQINDGAPLE 525
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRC-----------LLKVLVRAFWEEGKINEAVA 382
FW + L +S K A + LA + + C LL LV +F E+GK++ A A
Sbjct: 103 FWTYNLLTRSLCK--AGMHDLAGQMFE-CMKSDGISPNSRLLGFLVSSFAEKGKLHCATA 159
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE---KIKSLRHSKPLEITFTGLI 439
+ ++ V G V L L R +DAM + E + +S +K I GL
Sbjct: 160 LL--LQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLC 217
Query: 440 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
G + + + M C P+I T N ++K + +++ KA E+F++ +SS
Sbjct: 218 ----GVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDV--KSSS 271
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
G + PD TY+SM+ A + + + M G L+
Sbjct: 272 GCS----------PDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDG 321
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
++AG+ H E ++ G P + FT ++
Sbjct: 322 YAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLI 354
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 89/456 (19%), Positives = 178/456 (39%), Gaps = 58/456 (12%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
K R + +L+D L + + + + +M Q G + L+KGL
Sbjct: 341 KCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL----CMEH 396
Query: 209 AMSVLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY-----P 262
+S W++ K + Y L+ L + G + AL++ ML D Y P
Sbjct: 397 RISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKP 456
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
+ +Y + L + E +L E M+ + + PD++ Y +++
Sbjct: 457 TLISYSIIIDGLCKDRREDEARELFEEMKAQG---------------IMPDVISYTTLIH 501
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA 382
S +W+ +F ++ G++P T VL+ ++GK+ EA
Sbjct: 502 GFCLSGKWEKAKCLFNEMLDVGIQPDVTTS------------SVLIDMLCKKGKVIEANK 549
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 442
+ + QRG + L LC R A + K++ L P +T L+
Sbjct: 550 LLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKL-GCMPNVVTCATLMKGL 608
Query: 443 MDGGHIDDCISIFQHMKD-------HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
G+I + + ++M +C+PN + + ++ + +A+ELF+E
Sbjct: 609 CQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEM--- 665
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
+ PD +Y+S++ + +W+ +Y++ M G Q D T + L
Sbjct: 666 ----------KALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVL 715
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + GK + +++ G IP+ + +T ++
Sbjct: 716 IDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 751
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 166/426 (38%), Gaps = 59/426 (13%)
Query: 152 RSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
R + +L+D L + + + + +M Q G + L+KGL +S
Sbjct: 51 RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL----CMEHRIS 106
Query: 212 VLDWVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY-----PDIA 265
W++ K + Y L+ L + G + AL++ ML D Y P +
Sbjct: 107 EATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLI 166
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
+Y S+ + GL K+ R + + K M + + PD++ Y ++++
Sbjct: 167 SY-SIIID----GLCKD------RREDEARELFKEMKAQG----MMPDVISYTSLIHGFC 211
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
S +W+ +F ++ G++P T G VL+ F +EGK+ EA +
Sbjct: 212 HSGKWEKAKCLFNEMLDVGIQPDVTTSG------------VLIDMFCKEGKVIEANELLE 259
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M RG + Y L LC R +A + +K L +P I + L+
Sbjct: 260 VMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKL-GCRPDAIAYGTLMKGLCQT 318
Query: 446 GHIDDCISIFQHMKD-------HC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
G I+ + + Q M + C P++ T + ++ + + +A EL E +
Sbjct: 319 GKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQR-- 376
Query: 498 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 557
G L D TYS++++ H+ +++ M GC+ D + L+
Sbjct: 377 ---------GCIL--DIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMK 425
Query: 558 EASRAG 563
+ G
Sbjct: 426 GLCQTG 431
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/417 (19%), Positives = 170/417 (40%), Gaps = 56/417 (13%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D L ++ + K + ++ Q G + L+KGL K +A + +
Sbjct: 533 VLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLF---LKM 589
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY-----PDIAAYHSVAVTL 274
+ + + L+ L ++G AL + ML D + Y P+ +Y + L
Sbjct: 590 QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGL 649
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G E +L + M+ + PD++ Y ++++ S +WK
Sbjct: 650 CKCGREDEARELFKEMKALG---------------VIPDVISYTSLIHGFCRSGKWKDAK 694
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
++F ++ G++P T+ VL+ +EGK+ EA + M QRG +
Sbjct: 695 YLFNEMVDIGVQPDVTTF------------SVLIDMLCKEGKVIEANELLEVMIQRGCIP 742
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
Y L LC N R +A + K++ L P +T+ L+ G+I + +
Sbjct: 743 NTVTYTTLVKGLCMNDRISEATQLFMKMQKL-GCLPDVVTYGTLMKGLCQTGNIKTALEL 801
Query: 455 FQHM-------KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
+ M + +P++ + + ++ ++ +A+ELF+E
Sbjct: 802 HKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM-------------KA 848
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+ P+ +Y+S++ + + E ++++ M G QL+ ++ ++ + G+
Sbjct: 849 LGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQ 905
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 110/271 (40%), Gaps = 33/271 (12%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
D+V Y+ ++ H+ W+F ++K G +P A TYG L++
Sbjct: 88 DIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYG------------TLMKGLC 135
Query: 373 EEGKINEAVAAVRNM-EQRGVVG-----TASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
+ G IN A+ + M G G T Y + LC + R +A + +++K+ +
Sbjct: 136 QTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKA-Q 194
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKA 485
P I++T LI G + +F M D +P++ T ++ ++ + +A
Sbjct: 195 GMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEA 254
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
EL E + G L D TYS++++ H+ ++ M GC
Sbjct: 255 NELLE-----------VMVHRGCIL--DIVTYSTLIKGLCMKHRISEATQLFMSMKKLGC 301
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
+ D + L+ + GK ++ H +L
Sbjct: 302 RPDAIAYGTLMKGLCQTGKINIALHLHQEML 332
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 120/304 (39%), Gaps = 34/304 (11%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L PD +N ++N + + + G P TY + + +L+
Sbjct: 6 LFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTS---SMLID 62
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+EGK+ EA + M QRG + Y L LC R +A + ++ L +
Sbjct: 63 ILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKL-GCR 121
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKD-------HCEPNIGTVNAMLKVYSRNDMF 482
P IT+ L+ G+I+ + + Q M + C+P + + + ++ ++
Sbjct: 122 PDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRE 181
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
+A+ELF+E + G + PD +Y+S++ + +WE + ++ M
Sbjct: 182 DEARELFKE-----------MKAQG--MMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLD 228
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
G Q D T L+ + GK ++EA E+ + ++ + S K
Sbjct: 229 VGIQPDVTTSGVLIDMFCKEGK----------VIEANELLEVMVHRGCILDIVTYSTLIK 278
Query: 603 AVAL 606
+ +
Sbjct: 279 GLCM 282
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 120/283 (42%), Gaps = 26/283 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L PD+V +N +L+ + +F Q+ ++ +P+ T+ L+
Sbjct: 145 LHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF------------TTLMN 192
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
EG+I EAVA + M + G+ T Y + +C G A+ ++ K++ + H
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P + ++ +I S G D ++F M++ P++ T N+M+ + + +S A++L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+E S PD TY++++ A ++ E +Y M G +
Sbjct: 313 LQEMLERKIS-------------PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
++ ++ + + EH F + G P+ + F ++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/445 (20%), Positives = 170/445 (38%), Gaps = 60/445 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ GL +G +A+++LD + GL+ ++ Y ++ + K G AL +
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQ-----PTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M E ++ P++ Y ++ +L + G + L M++K + PD
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG---------------IFPD 289
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
L YN+++ S +W + +++ + + P TY L+ AF +
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY------------NALINAFVK 337
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
EGK EA M RG++ Y + C R DA + + + + P I
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL-DAAEHMFYLMATKGCSPNLI 396
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
TF LI IDD + + M + + T N ++ + + A +L +E
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM-----------A 541
SSG L PD T ++L+ + + ++K M
Sbjct: 457 I---SSG----------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 601
+G + D + L+ GK E ++ + G +P + ++ M+ QS +
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 602 KAVALINAMAYAPFHITERQWTELF 626
+A + ++M F +T L
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLI 588
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 90/456 (19%), Positives = 179/456 (39%), Gaps = 56/456 (12%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E R L++ L + + M + GL T+ ++ G+ KG
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
A+++L + + + + +Y+ ++ L K GR +A +F M E ++PD+ Y
Sbjct: 237 SALNLLRKMEEVS--HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTY 293
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+S+ V G + +L++ M + RK + PD+V YNA++NA V
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEM----------LERK-----ISPDVVTYNALINAFVKE 338
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
++ ++ ++ G+ P+ TY ++ F ++ +++ A M
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITY------------SSMIDGFCKQNRLDAAEHMFYLM 386
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS----- 442
+G + L C R D M L H E+T TGL+ +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGM-------ELLH----EMTETGLVADTTTYNT 435
Query: 443 -MDG----GHIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
+ G G ++ + + Q M C P+I T + +L N A E+F+ ++
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
+G ++PD TY+ ++ ++ E +Y+ M G D ++ +
Sbjct: 495 KKDLDASHPFNG--VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + + FDS+ P+ + FT ++
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 111/295 (37%), Gaps = 54/295 (18%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
A R + + + + M E L D Y+++ VG L + L++ M
Sbjct: 408 AKRIDDGMELLHEMTET-GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG------ 460
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-----------GLKPSA 349
L PD+V + +L+ + + K +FK ++KS G++P
Sbjct: 461 ---------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY +L+ EGK EA M RG+V Y + LC
Sbjct: 512 QTY------------NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
R +A + + + S S P +TFT LI G +DD + +F M + N T
Sbjct: 560 SRLDEATQMFDSMGSKSFS-PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
++ + + + A ++F+E SSG + PD T +ML
Sbjct: 619 YITLICGFRKVGNINGALDIFQEMI---SSG----------VYPDTITIRNMLTG 660
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 98/244 (40%), Gaps = 19/244 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ G + AL + M+ L PDI ++ L G LK+ +++ + M
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
QK K + H N +EPD+ YN +++ + ++ +++++ G+ P
Sbjct: 492 -QKSKKDLDASHPFNG---VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY ++ ++ +++EA +M + + L C G
Sbjct: 548 TY------------SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
R D + + ++ R IT+ LI G+I+ + IFQ M P+ T+
Sbjct: 596 RVDDGLELFCEMGR-RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654
Query: 470 NAML 473
ML
Sbjct: 655 RNML 658
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 113/546 (20%), Positives = 205/546 (37%), Gaps = 99/546 (18%)
Query: 107 NLKRENLRELKEMFEKDLNWVL--DDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDR 164
NLK EN + + E D+ L + D+ L +YF K ++ ++++++
Sbjct: 29 NLKAENEEKSSVLKEADVLKRLKHEHDITLALEYFKSIAN---SKSFKHTPLTYQMMIEK 85
Query: 165 L-SEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKR 223
L SEREM + ++ M G+ +E + ++ GS QA+ Y ++D R
Sbjct: 86 LASEREMDCVQY-LLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTF---YRMQDFR 141
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
+ +Y +L L R I++ M +D + P++ Y+ + L + +
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKD-GMEPNVFTYNILLKALCKNNRVDGA 200
Query: 284 VKLIERMRQKPS---------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
KL+ M K K K + P + VYNA++N +
Sbjct: 201 HKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEY 260
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYG------------------LAMESYRRC-----LLK 365
++ F + ++ G+ P+ +Y LA R C
Sbjct: 261 TFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFT 320
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
L++ F+ +G +EA+ M + GVV Y L LC+ DA+ V +++ +
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQME-I 379
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
P T++ LI G +D ++ M H C PN+ M+ V RN MF++
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQ 439
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A L E N P+ T+++ + KG+ SG
Sbjct: 440 AYCLIENMQVENC-------------PPNTVTFNTFI----------------KGLCGSG 470
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
++D W + FD + +G P+ + E+L + + +A
Sbjct: 471 -RVD-----WAI-------------KVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAF 511
Query: 605 ALINAM 610
L+ M
Sbjct: 512 GLVKDM 517
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 32/263 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL K S A+SV + ++ + Y+ L+ KAG A ++N M+
Sbjct: 357 LMHGLCSKRSLGDAVSVFNQ---MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMI 413
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+P++ AY + L + + + LIE NM +N P+ V
Sbjct: 414 TH-GCHPNVVAYTCMVDVLCRNSMFNQAYCLIE-----------NMQVENC----PPNTV 457
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+N + S + VF Q+ SG P+ TY ++S LLK +
Sbjct: 458 TFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDS----LLK--------DR 505
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ EA V++ME RG+ Y + C G +A+ ++ K+ +R +KP IT
Sbjct: 506 RFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKM-VVRGTKPDAITV 564
Query: 436 TGLIISSMDGGHIDDCISIFQHM 458
+I + G ++ I + +
Sbjct: 565 NIVIDAYCKQGKVNIAIQLMDRL 587
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/389 (19%), Positives = 157/389 (40%), Gaps = 46/389 (11%)
Query: 223 RDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE 282
R L S ++K+L+ + K+ + +F+ M E C + D+ +Y+ V L +
Sbjct: 5 RPLPSIVDFSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNIVINCLCRCSRFVI 63
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
+ ++ +M + EPD+V ++++N ++ + ++ +
Sbjct: 64 ALSVVGKMMKFG---------------YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 108
Query: 343 SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
G +P Y ++ + G +N+AV ME+ GV A Y L
Sbjct: 109 MGFRPDVVIY------------NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL 156
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC 462
LC +GRW DA ++ + +R P ITFT +I + G + + +++ M C
Sbjct: 157 VAGLCCSGRWSDAARLMRDM-VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 215
Query: 463 -EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
+P++ T N+++ + +AK++ + PD TY++++
Sbjct: 216 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC-------------LPDVVTYNTLI 262
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
+ + + +++ MA G D + ++ +AG+ + F +
Sbjct: 263 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSR 319
Query: 582 PHPLFFTEMLIQAIVQSNYEKAVALINAM 610
P+ ++ +L + EKA+ L M
Sbjct: 320 PNIRTYSILLYGLCMNWRVEKALVLFENM 348
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 127/316 (40%), Gaps = 48/316 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIF-NLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+A L +GR +A R+ ++++ D + P++ + +V + G E +KL E
Sbjct: 153 YNSLVAGLCCSGRWSDAARLMRDMVMRD--IVPNVITFTAVIDVFVKEGKFSEAMKLYEE 210
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M ++ ++PD+ YN+++N + + + G P
Sbjct: 211 MTRR---------------CVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 255
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L+ F + +++E R M QRG+VG Y +
Sbjct: 256 VTY------------NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 303
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
GR A + ++ S + + I GL ++ ++ + +F++M K E +I T
Sbjct: 304 GRPDAAQEIFSRMDSRPNIRTYSILLYGLCMN----WRVEKALVLFENMQKSEIELDITT 359
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
N ++ + A +LF LS G LKPD +Y++M+
Sbjct: 360 YNIVIHGMCKIGNVEDAWDLFRS-----------LSCKG--LKPDVVSYTTMISGFCRKR 406
Query: 529 QWEYFEYVYKGMALSG 544
QW+ + +Y+ M G
Sbjct: 407 QWDKSDLLYRKMQEDG 422
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 97/520 (18%), Positives = 201/520 (38%), Gaps = 45/520 (8%)
Query: 157 AIRVLVDRLSEREMTAKN------WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
++R +VD ++ ++ + +KF I +Q FT + + L + +A
Sbjct: 81 SVRHVVDLINRNPLSLPHRSIFAFFKF--ISSQPEFRFTVETYFVMARFLAIHEMFVEAQ 138
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE--DCNLYPDIAAYH 268
S+++ V K K S F+ +++ G P + LM+ D PD+
Sbjct: 139 SLIELVVSRKGKNSASSVFI-----SLVEMRGTPMCDFLVDALMITYMDLGFIPDVIQCF 193
Query: 269 SVAVTLGQVGLLKELVKLIERM-RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++ V ++ L++RM + P+ + + + D ++ V+N ++N
Sbjct: 194 RLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKE 253
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
VF ++ K L+P+ ++ L+ + + G ++ +M
Sbjct: 254 GNICDAQKVFDEITKRSLRPTVVSF------------NTLINGYCKVGNLDVGFRLKHHM 301
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
E+ Y L LC + A + ++ R P ++ FT LI G
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCE-RGLIPNDVIFTTLIHGHSRNGQ 360
Query: 448 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
ID +Q M +P+I N ++ + +N A+ + + R
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG---------- 410
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
L+PD+ TY+++++ + + K M +G +LD+ + L+ + G+
Sbjct: 411 ---LRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVI 467
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 626
E A +L AG P + +T M+ + + + L+ M + HI +
Sbjct: 468 DAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQ-SDGHIPNVVTYNVL 526
Query: 627 ESNEDRISRDK-LEKLLNALCNCNAASSEITVSNLSRALH 665
+ ++ + K + LL+A+ N +IT + L H
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHH 566
>gi|298711207|emb|CBJ32428.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 870
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 163/395 (41%), Gaps = 60/395 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y LL KA + A +F M + + PD Y++V LG+ G +KE + M
Sbjct: 253 YNLLLNACAKARKWEHAQLVFEDMKKKAGVKPDNVTYNTVINALGRCGRVKEATVHLHAM 312
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+++ L PD+V + +++AC S + + +F +L GLKP+
Sbjct: 313 KEQG---------------LSPDVVTFGTLIHACAQSAKREPALALFAELVSRGLKPN-- 355
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGK--INEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
+E+Y+ C++ +++G N +A M+ R V TA +ACC
Sbjct: 356 -----LEAYKGCIVSCHKTGHYQQGLDLFNRMLADKVRMD-RVVFNTA-----IACC-AQ 403
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIG 467
W+ + ++++++ R P + ++ I + + M+ D +P++
Sbjct: 404 LKLWRRGVAMLDEMRE-RKVAPDQYSYNSAIYGCVKAQQSQQMTMVLARMREDGFDPDVW 462
Query: 468 TVNAMLKVYSRNDMFSKA----------------KELFEETTRANSSG---------YTF 502
T + +++ + + ++ +A F RA S T
Sbjct: 463 TYSNLIRCLADSMLWRRAVGILDDMLLEGRVQPDAHCFNAAVRACSKVGEWAEAERLVTG 522
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
+ G G L PD+YTY+S++ A + +WE + + + +G +++ ++ + +A
Sbjct: 523 MRGQG--LAPDKYTYNSLIYAYGNSGEWEKALSMLEEIRAAGFKVNCMAYSAAIKACDKA 580
Query: 563 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 597
+ D ++E G + LF + A V+
Sbjct: 581 FQWERALELLDRMVERGGVKPNLFAYNHAMSACVR 615
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 125/303 (41%), Gaps = 44/303 (14%)
Query: 344 GLKPSAATYGLAMESY----RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
G P+ TYGLA+E+ +R K + E +N ++ V RG V ++
Sbjct: 47 GWAPTEETYGLALEACGKVRKRWGFKAPLFLIQEMRDVNLEISLV---HYRGAVTACALT 103
Query: 400 YELACCLC------NNGRWQD----AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
+L+ L + G D A+ +V+ ++S P IT+ L+ GG
Sbjct: 104 RQLSGVLPLLDEMRDRGVAADVVKRALGLVQMMRS-EGLAPTAITYNVLLRLCGLGGCWA 162
Query: 450 DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET----TRANSSGYTFLS 504
+ + M+D PN N+M R + + +A ELF + TR N+ Y L
Sbjct: 163 TGLELMGMMEDEGITPNPYHYNSMFMALERGERWREAAELFRKMRACGTRPNALTYAPLI 222
Query: 505 G----------DGAPLK------PDEYT--YSSMLEASATAHQWEYFEYVYKGM-ALSGC 545
G GA LK P + T Y+ +L A A A +WE+ + V++ M +G
Sbjct: 223 GVMDRCNKQDMAGAVLKEMLRESPRDSTREYNLLLNACAKARKWEHAQLVFEDMKKKAGV 282
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS-NYEKAV 604
+ D + ++ R G+ ++ E G P + F LI A QS E A+
Sbjct: 283 KPDNVTYNTVINALGRCGRVKEATVHLHAMKEQGLSPDVVTFG-TLIHACAQSAKREPAL 341
Query: 605 ALI 607
AL
Sbjct: 342 ALF 344
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 75/186 (40%), Gaps = 13/186 (6%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
D + P+ YN++ A +W+ +F+++R G +P+A TY + RC
Sbjct: 173 DEGITPNPYHYNSMFMALERGERWREAAELFRKMRACGTRPNALTYAPLIGVMDRC---- 228
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
K + A A ++ M + + Y L +W+ A LV E +K
Sbjct: 229 --------NKQDMAGAVLKEMLRESPRDSTREYNLLLNACAKARKWEHAQLVFEDMKKKA 280
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 485
KP +T+ +I + G + + MK+ P++ T ++ +++ A
Sbjct: 281 GVKPDNVTYNTVINALGRCGRVKEATVHLHAMKEQGLSPDVVTFGTLIHACAQSAKREPA 340
Query: 486 KELFEE 491
LF E
Sbjct: 341 LALFAE 346
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 118/320 (36%), Gaps = 42/320 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++ L D WR+A+ +LD + L + R + + K G EA R+ M
Sbjct: 467 LIRCLADSMLWRRAVGILDDM--LLEGRVQPDAHCFNAAVRACSKVGEWAEAERLVTGMR 524
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
L PD Y+S+ G G ++ + ++E +R K + +
Sbjct: 525 GQ-GLAPDKYTYNSLIYAYGNSGEWEKALSMLEEIRAAGFK---------------VNCM 568
Query: 316 VYNAVLNACVPSHQWKGVFWVF-KQLRKSGLKPSAATYGLAMESYRR-----CLLKVLVR 369
Y+A + AC + QW+ + + + + G+KP+ Y AM + R K L
Sbjct: 569 AYSAAIKACDKAFQWERALELLDRMVERGGVKPNLFAYNHAMSACVRFSPPYSRRKELHG 628
Query: 370 AFWEEGKINE---AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
+G ++ V A + + G+ G + L L GRW++A+ E K
Sbjct: 629 EGGGQGAVSPTSFCVPANLPVFEAGIPGDWYSNHALLEALGRGGRWEEAVKTFEDKKRQA 688
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
P + + ++ G + + M P G + S K
Sbjct: 689 DRPPEQTCYKTMLRVCERAGFACQAVEYLKEM-----PAAGVPPTL----------SHFK 733
Query: 487 ELFEETTRANSSGYTFLSGD 506
+ + RA S G T GD
Sbjct: 734 QALKACERATSRGLTGGRGD 753
Score = 39.3 bits (90), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 15/130 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y+ L+ L + A+ I + ML + + PD +++ +VG E +L+
Sbjct: 462 WTYSNLIRCLADSMLWRRAVGILDDMLLEGRVQPDAHCFNAAVRACSKVGEWAEAERLVT 521
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR + L PD YN+++ A S +W+ + +++R +G K +
Sbjct: 522 GMRGQG---------------LAPDKYTYNSLIYAYGNSGEWEKALSMLEEIRAAGFKVN 566
Query: 349 AATYGLAMES 358
Y A+++
Sbjct: 567 CMAYSAAIKA 576
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 153/425 (36%), Gaps = 50/425 (11%)
Query: 189 TEGQMLKLLKGLGDKGSWRQAMSVLDWV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHE 246
TE LLK G +A ++ + YGL S VY + L KAG P
Sbjct: 182 TEDTYALLLKAYCTSGLLEKAEAIFAEMRKYGLP-----PSAIVYNAYIDGLMKAGNPQR 236
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
A+ IF M DC P Y + G+ +KL MR + K
Sbjct: 237 AVEIFQRMKRDC-CQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCK---------- 285
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
P++ Y A++NA + +F+QL++ G +P Y ME+Y R
Sbjct: 286 -----PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRA---- 336
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
G A M+ G + Y + G +DA V E++K L
Sbjct: 337 --------GFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLG 388
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 485
+ P + L+ + G + C I + + EP+ +N+ML +Y R F K
Sbjct: 389 IT-PTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGK- 446
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
EE A SG P D TY+ ++ A +E E +++ +A
Sbjct: 447 ---MEEVLTAMESG---------PYATDISTYNILINIYGRAGFFEKMEGLFQSLAAKNL 494
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
+ D L SR F+ +++AG P +L + E+
Sbjct: 495 KPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPDGRTAKVLLSSCSSEDQIEQVTT 554
Query: 606 LINAM 610
+I M
Sbjct: 555 VIRTM 559
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 126/296 (42%), Gaps = 47/296 (15%)
Query: 304 KNWDPVL------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K WD +L + D++++N V++A +K + +L ++ P+ T
Sbjct: 126 KKWDLILLICQWILYRSSFQSDVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDT 185
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y L L++A+ G + +A A M + G+ +A VY L G
Sbjct: 186 YAL------------LLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGN 233
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
Q A+ + +++K +P T+T LI + +F M+ C+PNI T
Sbjct: 234 PQRAVEIFQRMKR-DCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYT 292
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
A++ ++R + KA+E+FE+ L DG +PD Y Y++++EA + A
Sbjct: 293 ALVNAFAREGLCEKAEEIFEQ-----------LQEDGH--EPDVYAYNALMEAYSRAG-- 337
Query: 531 EYFEY----VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
F Y ++ M GC+ D+ + ++ R G + F+ + G P
Sbjct: 338 --FPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITP 391
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 136/364 (37%), Gaps = 49/364 (13%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L P +VYNA ++ + + + +F+++++ +PS TY L + +
Sbjct: 214 LPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLH---------- 263
Query: 370 AFWEEGKINEAVAAVR---NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
GK +++ A++ M + Y L G + A + E+++
Sbjct: 264 -----GKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 318
Query: 427 HSKPLEITFTGLIISSMDGGH---IDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFS 483
H +P + L+ + G + S+ QHM CEP+ + N M+ Y R +
Sbjct: 319 H-EPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMG--CEPDRASYNIMVDAYGRGGLHE 375
Query: 484 KAKELFEETTRAN-----SSGYTFLS-----GDGAP------------LKPDEYTYSSML 521
A+ +FEE R S LS GD A L+PD + +SML
Sbjct: 376 DAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSML 435
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
Q+ E V M D + + L+ RAG +E F SL
Sbjct: 436 NLYGRLGQFGKMEEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSLAAKNLK 495
Query: 582 PHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKL 641
P + +T L + Y K + + M A H R L S S D++E++
Sbjct: 496 PDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCHPDGRTAKVLLSSCS---SEDQIEQV 552
Query: 642 LNAL 645
+
Sbjct: 553 TTVI 556
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 156/378 (41%), Gaps = 55/378 (14%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+++ L ++ T K + +R+M Q ++ G A S+L+ +K
Sbjct: 184 VMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNE---MK 240
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
K F Y+ L+ L K + E +R L + N+YP++ ++SV L + G +
Sbjct: 241 QKSIPPDIFTYSTLIDALCKLSQ-WENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299
Query: 281 KELVKLIERMRQK---PSKRIKNM-------------HRKNWDPVL----EPDLVVYNAV 320
++ +++ M +K P NM R+ +D ++ EP+++ YN +
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNIL 359
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES---------------------- 358
+N + V +++ + GLKPS T + +
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGH 419
Query: 359 ----YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
Y C L+ +++ G + EA++ +E+R +Y + LC NG+
Sbjct: 420 IPDLYTHC---TLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDK 476
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 473
A EK+ L P IT+T +I G +D+ + + M+D+ C + T N ++
Sbjct: 477 AHATFEKL-PLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIV 535
Query: 474 KVYSRNDMFSKAKELFEE 491
+ + R++ S+ K EE
Sbjct: 536 RGFLRSNKVSEMKAFLEE 553
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 139/325 (42%), Gaps = 40/325 (12%)
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
K + R+N + EP+ V+Y V+N C H K F + + + + KP+
Sbjct: 166 KKLVREN---ICEPNEVMYGTVMNGLCKKGHTQKA-FDLLRLMEQGSTKPNT-------- 213
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
C+ +++ AF ++G ++ A + + M+Q+ + Y L LC +W++
Sbjct: 214 ----CIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRT 269
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 476
+ ++ L + P TF +I G ++D I ++M + +P++ T N ++ Y
Sbjct: 270 LFLEMIHL-NIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGY 328
Query: 477 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
+A+E+F+ + N S ++P+ +Y+ ++ A + + V
Sbjct: 329 GLRGQVDRAREIFD--SMINKS-----------IEPNIISYNILINGYARQKKIDEAMQV 375
Query: 537 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 596
+ ++ G + LL G+ ++ FD +L AG IP ++ +
Sbjct: 376 CREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIP------DLYTHCTL 429
Query: 597 QSNYEKAVALINAMAYAPFHITERQ 621
Y K + AM++ FH ER+
Sbjct: 430 LGGYFKNGLVEEAMSH--FHKLERR 452
>gi|242032435|ref|XP_002463612.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
gi|241917466|gb|EER90610.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
Length = 638
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 127/354 (35%), Gaps = 81/354 (22%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G+ GR +F M + PD A Y+ + G G KE+V+L
Sbjct: 128 TYRVLLDLYGRQGRFDGVRELFREM--RTAVPPDTATYNVLFRVYGDGGFFKEVVELFHD 185
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + +EPD+V V+ AC + V + + + G+ P+A
Sbjct: 186 MLETG---------------VEPDMVTCENVMAACGRGGLHEDAREVLEYMTREGMVPTA 230
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
Y LV A EA A M + G + T Y LA
Sbjct: 231 DAY------------TGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNTLAFAYARG 278
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD--------- 460
G +Q+A + ++ + + + +F LI + G +DD + + M+
Sbjct: 279 GLFQEAEAIFSRMSNNAGIQKNKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERS 338
Query: 461 -------HC--------------------EPNIGTVNAMLKVYSRNDMFSKAKELFEE-- 491
+C P+I ML +Y+RND ++ A ++ EE
Sbjct: 339 LEGVLNAYCIAGVIDESKEQFEELQSSVTLPSIIAYCMMLSLYARNDRWADAYDMLEEMK 398
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
T RA+S+ A L EY SS W+ EY + + GC
Sbjct: 399 TNRASSTHQVI-----ASLIKGEYDDSS---------NWQMVEYALENSTMEGC 438
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 135/371 (36%), Gaps = 60/371 (16%)
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
R + P + PDL YN +L A + + + ++G+ P +Y ++++
Sbjct: 10 RHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLRTMLEAGVSPDTVSYRYIVDAFASA 69
Query: 363 --LLKV---------------------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
L +V L+ A G EAVA +R M+ G TA+ Y
Sbjct: 70 GNLSRVAELFSEMAVMGNTADASAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATY 129
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHM 458
L GR+ V E + +R + P + T+ L DGG + + +F M
Sbjct: 130 RVLLDLYGRQGRFDG---VRELFREMRTAVPPDTATYNVLFRVYGDGGFFKEVVELFHDM 186
Query: 459 -KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
+ EP++ T ++ R + A+E+ E TR + P Y
Sbjct: 187 LETGVEPDMVTCENVMAACGRGGLHEDAREVLEYMTREG-------------MVPTADAY 233
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+ ++EA A +E + M G + L +R G L +
Sbjct: 234 TGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNTLAFAYARGG-----------LFQ 282
Query: 578 AGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDK 637
E F+ M A +Q N + ALI AY + E + R + D+
Sbjct: 283 EAEA----IFSRMSNNAGIQKNKDSFDALIE--AYCQGAQLDDAVKAYMEMRKSRFNPDE 336
Query: 638 --LEKLLNALC 646
LE +LNA C
Sbjct: 337 RSLEGVLNAYC 347
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 97/477 (20%), Positives = 178/477 (37%), Gaps = 68/477 (14%)
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
A + + L Q+GLL E + + R+R P+ L NAVL+ V
Sbjct: 121 ALGVLVIALSQMGLLDEALYVFRRLRTLPA------------------LPACNAVLDGLV 162
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
+ + + +F ++ + GL PS TY L+ A +G + +A
Sbjct: 163 KARRPGCAWELFDEMLRRGLVPSVVTY------------NTLINACRFQGTVAKAQEVWD 210
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M + + Y + C LC G DA + + +K +P + T+ L+
Sbjct: 211 QMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKE-AGMQPNQYTYNVLMSGHCQR 269
Query: 446 GHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT--- 501
++ + ++Q +K PN ++ + + FS+AK +F E R +
Sbjct: 270 DDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVY 329
Query: 502 -------FLSGDGA------------PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
F SG+ L PDE+T S ++ Q + +G+
Sbjct: 330 NSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQE 389
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS---LLEAGEIPHPLFFTEMLIQAIVQSN 599
G L+ + L+ E R G LE A + + E G P+ + ++ ++ +
Sbjct: 390 DGVNLNAAAYNALIDEYCRIGN---LEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGK 446
Query: 600 YEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSN 659
+ A+A+ M +T L + D +L + + + ITVS
Sbjct: 447 MQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSV 506
Query: 660 LSRALHALCRSEKERDLSSSAHFGSQ--AIDISPLHGIHEAFDVKETENVPSSSASM 714
L + LCR E + + F + + S +H + F ++E +P+S M
Sbjct: 507 L---VDGLCR---ENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYM 557
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 88/439 (20%), Positives = 165/439 (37%), Gaps = 49/439 (11%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
+VD L++ + + + +G T LL GL G +A +D + +
Sbjct: 171 IVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA---IDLLRKIV 227
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
D YT L+ LGK R EA ++F M L D Y ++ L Q G +
Sbjct: 228 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALR-GLVLDTVCYTALIRGLLQAGKI 286
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
+ + + M + PD+V + +++ + + +FK +
Sbjct: 287 PQASSVYKTMTSQGCV---------------PDVVTLSTMIDGLCKAGRIGAAVRIFKSM 331
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
GL P+ Y L+ + K++ A+ + M++ Y
Sbjct: 332 EARGLAPNEVVY------------SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 379
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-K 459
L LC +G + A +++ KP T+ L+ G+ D +F M
Sbjct: 380 ILIDGLCKSGDVEAARAFFDEMLE-AGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSS 438
Query: 460 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
HC PN+ T ++ + +KA F+ + G P PD + YSS
Sbjct: 439 SHCSPNVVTYGTLISGLCKRRQLTKASLYFQH-----------MKERGCP--PDSFVYSS 485
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 579
+++ + + E ++ M SG QT+ L+ +A + F+++ + G
Sbjct: 486 LVDGLCKSGKLEGGCMLFDEMERSGVANSQTR-TRLIFHLCKANRVDEAVSLFNAIRKEG 544
Query: 580 EIPHPLFFTEMLIQAIVQS 598
+PHP + +I +++S
Sbjct: 545 -MPHPYAYNS-IISTLIKS 561
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/395 (19%), Positives = 155/395 (39%), Gaps = 32/395 (8%)
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-GLKPSA 349
R K + N+ + PD+ +N ++ + + + F V +++ + G+ PS
Sbjct: 71 RTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSL 130
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
T+ L + + GK+ A+ G Y + L N
Sbjct: 131 KTHNLVLH------------GLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKN 178
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 468
+ QDA+ ++EKI + P T+ L+ G +++ I + + + D+ C P++ T
Sbjct: 179 KKIQDAVALMEKITA-NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVT 237
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
+++ + +A +LF+E L G L D Y++++ A
Sbjct: 238 YTSLIDGLGKEKRSFEAYKLFKEMA---------LRG----LVLDTVCYTALIRGLLQAG 284
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ VYK M GC D + ++ +AG+ F S+ G P+ + ++
Sbjct: 285 KIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYS 344
Query: 589 EMLIQAIVQSNYEKAVALINAMAYA---PFHITERQWTE-LFESNEDRISRDKLEKLLNA 644
++ + A+ ++ M A P IT + L +S + +R +++L A
Sbjct: 345 ALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA 404
Query: 645 LCNCNAASSEITVSNLSRALHALCRSEKERDLSSS 679
C + + I VS +A + D+SSS
Sbjct: 405 GCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSS 439
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 97/476 (20%), Positives = 189/476 (39%), Gaps = 64/476 (13%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVR-IMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
K WR E ++ L D++ ++ K+ +FV I++ + T ++K +G + SW+
Sbjct: 121 KDWR---ERVKFLTDKI----LSLKSNQFVADILDARLVQMTPTDYCFVVKSVGQE-SWQ 172
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A+ V +W+ L+ +R V +L +LG+ + A+ IF + + + Y
Sbjct: 173 RALEVFEWL-NLRHWHSPNARMV-AAILGVLGRWNQESLAVEIFTR--AEPTVGDRVQVY 228
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKP------------SKRIK------NMHRKNWDPV 309
+++ + G + +L++ MRQ+ + R+K N+ + D V
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMV 288
Query: 310 ----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
L PD + YN +L+AC G VF+ + +P TY + Y RC
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC--- 345
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
G EA +E +G A Y L + V ++++ +
Sbjct: 346 ---------GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC--EPNIGTVNAMLKVYSRNDMFS 483
K E+T+ +I G +D + +++ MK P+ T ++ + +
Sbjct: 397 GFGKD-EMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTV 455
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
+A L E +KP TYS+++ A A + E E + M S
Sbjct: 456 EAAALMSEMLDVG-------------IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS 502
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
G + D ++ +L R + + ++ G P + E++I +++ N
Sbjct: 503 GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLY-ELMILGLMKEN 557
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 20/265 (7%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
++ + GK ++A V M QRG V + L +G L VE + +R
Sbjct: 231 MMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPN-LAVELLDMVR 289
Query: 427 HS--KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 483
+S +P IT+ L+ + ++D + +F+ M+ H C+P++ T NAM+ VY R + +
Sbjct: 290 NSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAA 349
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
+A+ LF E L G PD TY+S+L A A E + VY+ M
Sbjct: 350 EAERLFMELE---------LKG----FFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE-AGEIPHPLFFTEMLIQAIVQSNYE- 601
G D+ + ++ + G+ L + + +G P + +T +LI ++ ++N
Sbjct: 397 GFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYT-VLIDSLGKANRTV 455
Query: 602 KAVALINAMAYAPFHITERQWTELF 626
+A AL++ M T + ++ L
Sbjct: 456 EAAALMSEMLDVGIKPTLQTYSALI 480
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 88/242 (36%), Gaps = 30/242 (12%)
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD-CISIFQHMKDHCEPNIGTVN 470
WQ A+ V E + +LRH I+ + + + + IF + + N
Sbjct: 171 WQRALEVFEWL-NLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYN 229
Query: 471 AMLKVYSRNDMFSKAKELFEE-----------------TTRANSSGYT---------FLS 504
AM+ VYSR+ FSKA+EL + R S G T +
Sbjct: 230 AMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVR 289
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
G L+PD TY+++L A + + V++ M CQ D + ++ R G
Sbjct: 290 NSG--LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 624
E F L G P + + +L + N EK + M F E +
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 625 LF 626
+
Sbjct: 408 II 409
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 117/294 (39%), Gaps = 50/294 (17%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ ++S+ Q G ER R M R P +E N +L
Sbjct: 785 PDLKTWNSLMSAYAQCGCY-------ERARAI----FNTMMRDGPSPTVES----INILL 829
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
+A + + ++ V ++L+ G K S ++ L ++++ R G I E
Sbjct: 830 HALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARA------------GNIFEVK 877
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
+M+ G + T +Y + LC R +DA ++V +++ L I + L +
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 442 SMDGGHIDD---CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
+ I+D + ++Q +K+ EP+ T N ++ +Y R+ R
Sbjct: 938 T----AIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRD--------------RRPE 979
Query: 498 SGYTFLSG-DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
GY + L P TY S++ A E E +++ + G +LD++
Sbjct: 980 EGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRS 1033
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 120/283 (42%), Gaps = 26/283 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L PD+V +N +L+ + +F Q+ ++ +P+ T+ L+
Sbjct: 145 LHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF------------TTLMN 192
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
EG+I EAVA + M + G+ T Y + +C G A+ ++ K++ + H
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P + ++ +I S G D ++F M++ P++ T N+M+ + + +S A++L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+E S PD TY++++ A ++ E +Y M G +
Sbjct: 313 LQEMLERKIS-------------PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
++ ++ + + EH F + G P+ + F ++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/445 (20%), Positives = 170/445 (38%), Gaps = 60/445 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ GL +G +A+++LD + GL+ ++ Y ++ + K G AL +
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQ-----PTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M E ++ P++ Y ++ +L + G + L M++K + PD
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG---------------IFPD 289
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
L YN+++ S +W + +++ + + P TY L+ AF +
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY------------NALINAFVK 337
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
EGK EA M RG++ Y + C R DA + + + + P I
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL-DAAEHMFYLMATKGCSPNLI 396
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
TF LI IDD + + M + + T N ++ + + A +L +E
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM-----------A 541
SSG L PD T ++L+ + + ++K M
Sbjct: 457 I---SSG----------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 601
+G + D + L+ GK E ++ + G +P + ++ M+ QS +
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 602 KAVALINAMAYAPFHITERQWTELF 626
+A + ++M F +T L
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLI 588
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 90/456 (19%), Positives = 179/456 (39%), Gaps = 56/456 (12%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E R L++ L + + M + GL T+ ++ G+ KG
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
A+++L + + + + +Y+ ++ L K GR +A +F M E ++PD+ Y
Sbjct: 237 SALNLLRKMEEVS--HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTY 293
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+S+ V G + +L++ M + RK + PD+V YNA++NA V
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEM----------LERK-----ISPDVVTYNALINAFVKE 338
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
++ ++ ++ G+ P+ TY ++ F ++ +++ A M
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITY------------SSMIDGFCKQNRLDAAEHMFYLM 386
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS----- 442
+G + L C R D M L H E+T TGL+ +
Sbjct: 387 ATKGCSPNLITFNTLIDGYCGAKRIDDGM-------ELLH----EMTETGLVADTTTYNT 435
Query: 443 -MDG----GHIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
+ G G ++ + + Q M C P+I T + +L N A E+F+ ++
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
+G ++PD TY+ ++ ++ E +Y+ M G D ++ +
Sbjct: 495 KKDLDASHPFNG--VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + + FDS+ P+ + FT ++
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 111/295 (37%), Gaps = 54/295 (18%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
A R + + + + M E L D Y+++ VG L + L++ M
Sbjct: 408 AKRIDDGMELLHEMTET-GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG------ 460
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-----------GLKPSA 349
L PD+V + +L+ + + K +FK ++KS G++P
Sbjct: 461 ---------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY +L+ EGK EA M RG+V Y + LC
Sbjct: 512 QTY------------NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
R +A + + + S S P +TFT LI G +DD + +F M + N T
Sbjct: 560 SRLDEATQMFDSMGSKSFS-PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
++ + + + A ++F+E SSG + PD T +ML
Sbjct: 619 YITLICGFRKVGNINGALDIFQEMI---SSG----------VYPDTITIRNMLTG 660
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 98/244 (40%), Gaps = 19/244 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ G + AL + M+ L PDI ++ L G LK+ +++ + M
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
QK K + H N +EPD+ YN +++ + ++ +++++ G+ P
Sbjct: 492 -QKSKKDLDASHPFNG---VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY ++ ++ +++EA +M + + L C G
Sbjct: 548 TY------------SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
R D + + ++ R IT+ LI G+I+ + IFQ M P+ T+
Sbjct: 596 RVDDGLELFCEMGR-RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654
Query: 470 NAML 473
ML
Sbjct: 655 RNML 658
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 83/422 (19%), Positives = 166/422 (39%), Gaps = 91/422 (21%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+ Y LL +L GR +A+ +F ++D PD +++ V + +VG ++ ++L+E
Sbjct: 183 YAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVE 242
Query: 289 RM--------------------RQKPSKRIKNMHRK-NWDPVLEPDLVVYNAVLNACVPS 327
RM R K R ++ R+ D V P++V Y +V++ +
Sbjct: 243 RMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKA 302
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ + V+ + +SG +P+ TY + + Y GK + +AVR
Sbjct: 303 GRMEDALSVYNDMLESGTRPNTVTYNVLINGY---------------GKALDMESAVR-- 345
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+Y +L LR P +TF+ LI G
Sbjct: 346 ----------MYRQLI---------------------LRRCPPDVVTFSSLIDGYCRCGQ 374
Query: 448 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE-TTRANSSGYTFLSG 505
+DD + I++ M + H +PN+ T + ++ + + ++A E RA+
Sbjct: 375 LDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRAD--------- 425
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
+ P + Y+ +++ Q E + M GC D+ + L++ G+
Sbjct: 426 ----IAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRI 481
Query: 566 HLLEHAFDSLLEAGEIPHPLF---FTEMLIQAIVQSNYEKAVALINAMAYA----PFHIT 618
F ++E G P + F +++A + + ++ + + + A A P H +
Sbjct: 482 PEAITLFHKMVETGCRPDKITVNSFISCVLKAGMPNEVDQIMLIASGHASASQKVPSHPS 541
Query: 619 ER 620
+R
Sbjct: 542 QR 543
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 151/346 (43%), Gaps = 47/346 (13%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
F G L+K ++G + A+ V D + + L+S + LL L + G A
Sbjct: 154 FCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRS---CSFLLGKLVQKGEGRVA 210
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWD 307
+ +F+ ++ + PD+ V QVG + ++++E+M ++
Sbjct: 211 VMVFDQIVGT-GIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEG------------- 256
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
LEP++V YN ++N V ++GV V + + + G+ + T +L
Sbjct: 257 --LEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVT------------CTML 302
Query: 368 VRAFWEEGKINEAVAAVRNMEQ-RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
+R + ++GK++EA +R +E+ +V VY L C GR +DA+ + +++ +
Sbjct: 303 MRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVG 362
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKA 485
+ I T LI G + + +F M D + +P+ + N +L Y R SKA
Sbjct: 363 LKVNMVICNT-LIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKA 421
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
L EE + GDG + P TY+++++ ++
Sbjct: 422 FMLCEE-----------MLGDG--ITPTVVTYNTVIKGLVDVGSYD 454
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 20/145 (13%)
Query: 221 DKRD----LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
DK D L + VY + L K+G+ EA + ++++ PD Y ++
Sbjct: 706 DKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSR-GFLPDNFTYCTLIHACSV 764
Query: 277 VGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV 336
G + E KL + M +K L P++ +YNA++N +
Sbjct: 765 SGNVDEAFKLRDEMLEKG---------------LIPNITIYNALINGLCKLGNIDRAQRL 809
Query: 337 FKQLRKSGLKPSAATYGLAMESYRR 361
F +L + GL P+A TY + + Y R
Sbjct: 810 FYKLYQKGLVPNAVTYNILIGCYCR 834
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 88/421 (20%), Positives = 170/421 (40%), Gaps = 52/421 (12%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF-N 252
+ +LK G+ G + A D++ ++ R K + V T ++ LG+ G + ALR+F +
Sbjct: 145 IYMLKEFGNTGHFLLATKCFDFIIWKQNGRIAKGKLVST-MIGTLGRLGEINHALRLFES 203
Query: 253 LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKN--------- 300
LE + ++ ++ G+ G + V L MR P+ N
Sbjct: 204 ARLEGHG--NTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKG 261
Query: 301 -----MHRKNWDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ K +D +L PD + YN++L+ C W+ + ++ + G+ A T
Sbjct: 262 EVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFT 321
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y +Y L K G+I+ A + M R V T Y +
Sbjct: 322 Y----NTYLDTLCK--------GGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANL 369
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVN 470
+DA+ + E++K LR +++ ++ G D+ I + M+ + ++ T N
Sbjct: 370 LEDALNLYEEMK-LRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYN 428
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
A+L Y R M+ + + LFEE N + P+ TYS+M++ +
Sbjct: 429 ALLSGYGRYGMYDEVRRLFEEMKAWN-------------IYPNTLTYSTMIDVYTKGGMF 475
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
+ VYK + ++D + ++ + G +++E G P+ + F +
Sbjct: 476 QEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSI 535
Query: 591 L 591
+
Sbjct: 536 I 536
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 113/546 (20%), Positives = 205/546 (37%), Gaps = 99/546 (18%)
Query: 107 NLKRENLRELKEMFEKDLNWVL--DDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDR 164
NLK EN + + E D+ L + D+ L +YF K ++ ++++++
Sbjct: 29 NLKAENEEKSSVLKEADVLKRLKHEHDITLALEYFKSIAN---SKSFKHTPLTYQMMIEK 85
Query: 165 L-SEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKR 223
L SEREM + ++ M G+ +E + ++ GS QA+ Y ++D R
Sbjct: 86 LASEREMDCVQY-LLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTF---YRMQDFR 141
Query: 224 DLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKEL 283
+ +Y +L L R I++ M +D + P++ Y+ + L + +
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKD-GMEPNVFTYNILLKALCKNNRVDGA 200
Query: 284 VKLIERMRQKPS---------------KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
KL+ M K K K + P + VYNA++N +
Sbjct: 201 HKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEY 260
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYG------------------LAMESYRRC-----LLK 365
++ F + ++ G+ P+ +Y LA R C
Sbjct: 261 TFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFT 320
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
L++ F+ +G +EA+ M + GVV Y L LC+ DA+ V +++ +
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQME-I 379
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
P T++ LI G +D ++ M H C PN+ M+ V RN MF++
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQ 439
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A L E N P+ T+++ + KG+ SG
Sbjct: 440 AYCLIENMQVENC-------------PPNTVTFNTFI----------------KGLCGSG 470
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
++D W + FD + +G P+ + E+L + + +A
Sbjct: 471 -RVD-----WAI-------------KVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAF 511
Query: 605 ALINAM 610
L+ M
Sbjct: 512 GLVKDM 517
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 32/263 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL K S A+SV + ++ + Y+ L+ KAG A ++N M+
Sbjct: 357 LMHGLCSKRSLGDAVSVFNQ---MEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMI 413
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+P++ AY + L + + + LIE NM +N P+ V
Sbjct: 414 TH-GCHPNVVAYTCMVDVLCRNSMFNQAYCLIE-----------NMQVENC----PPNTV 457
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+N + S + VF Q+ SG P+ TY ++S LLK +
Sbjct: 458 TFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDS----LLK--------DR 505
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ EA V++ME RG+ Y + C G +A+ ++ K+ +R +KP IT
Sbjct: 506 RFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKM-VVRGTKPDAITV 564
Query: 436 TGLIISSMDGGHIDDCISIFQHM 458
+I + G ++ I + +
Sbjct: 565 NIVIDAYCKQGKVNIAIQLMDRL 587
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 79/405 (19%), Positives = 159/405 (39%), Gaps = 64/405 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + ++ L K G EA +F+ M ++ PD+ ++S+ G+ G L E+ +L+E
Sbjct: 189 FTFNIVIDFLCKEGELAEARSLFSRM-KEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVE 247
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
MR+ K D+V YNA++N + + + F +++ G+ +
Sbjct: 248 EMRRSGCK---------------ADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMAN 292
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
T+ V AF +EG + EA+ M RG+ Y L C
Sbjct: 293 VVTF------------STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCK 340
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
GR DA+++++++ +R PL +T+T L+ + + + + M K N
Sbjct: 341 AGRLDDAIVLLDEM--VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANE 398
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
++ + N KA L E L+ D Y ++++
Sbjct: 399 LLYTTLIHGHFMNKNSEKALGLLSEMKNKG-------------LELDISLYGALIQGLCN 445
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
H+ + + + M SG + + + ++ D+ ++G++P +
Sbjct: 446 VHKLDEAKSLLTKMDESGLEPNYIIYTTMM----------------DACFKSGKVPEAIA 489
Query: 587 FTEMLIQAIVQSN---YEKAVALINAMAYAPFHITERQWTELFES 628
+ ++ + Q N +AV L N M + + + +T L +
Sbjct: 490 MLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDG 534
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 97/476 (20%), Positives = 189/476 (39%), Gaps = 64/476 (13%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVR-IMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
K WR E ++ L D++ ++ K+ +FV I++ + T ++K +G + SW+
Sbjct: 121 KDWR---ERVKFLTDKI----LSLKSNQFVADILDARLVQMTPTDYCFVVKSVGQE-SWQ 172
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A+ V +W+ L+ +R V +L +LG+ + A+ IF + + + Y
Sbjct: 173 RALEVFEWL-NLRHWHSPNARMV-AAILGVLGRWNQESLAVEIFTR--AEPTVGDRVQVY 228
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKP------------SKRIK------NMHRKNWDPV 309
+++ + G + +L++ MRQ+ + R+K N+ + D V
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMV 288
Query: 310 ----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
L PD + YN +L+AC G VF+ + +P TY + Y RC
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC--- 345
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
G EA +E +G A Y L + V ++++ +
Sbjct: 346 ---------GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC--EPNIGTVNAMLKVYSRNDMFS 483
K E+T+ +I G +D + +++ MK P+ T ++ + +
Sbjct: 397 GFGKD-EMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTV 455
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
+A L E +KP TYS+++ A A + E E + M S
Sbjct: 456 EAAALMSEMLDVG-------------IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS 502
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
G + D ++ +L R + + ++ G P + E++I +++ N
Sbjct: 503 GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLY-ELMILGLMKEN 557
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 20/265 (7%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
++ + GK ++A V M QRG V + L +G L VE + +R
Sbjct: 231 MMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPN-LAVELLDMVR 289
Query: 427 HS--KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 483
+S +P IT+ L+ + ++D + +F+ M+ H C+P++ T NAM+ VY R + +
Sbjct: 290 NSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAA 349
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
+A+ LF E L G PD TY+S+L A A E + VY+ M
Sbjct: 350 EAERLFMELE---------LKG----FFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE-AGEIPHPLFFTEMLIQAIVQSNYE- 601
G D+ + ++ + G+ L + + +G P + +T +LI ++ ++N
Sbjct: 397 GFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYT-VLIDSLGKANRTV 455
Query: 602 KAVALINAMAYAPFHITERQWTELF 626
+A AL++ M T + ++ L
Sbjct: 456 EAAALMSEMLDVGIKPTLQTYSALI 480
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 88/242 (36%), Gaps = 30/242 (12%)
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD-CISIFQHMKDHCEPNIGTVN 470
WQ A+ V E + +LRH I+ + + + + IF + + N
Sbjct: 171 WQRALEVFEWL-NLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYN 229
Query: 471 AMLKVYSRNDMFSKAKELFEE-----------------TTRANSSGYT---------FLS 504
AM+ VYSR+ FSKA+EL + R S G T +
Sbjct: 230 AMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVR 289
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
G L+PD TY+++L A + + V++ M CQ D + ++ R G
Sbjct: 290 NSG--LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 624
E F L G P + + +L + N EK + M F E +
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 625 LF 626
+
Sbjct: 408 II 409
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 117/294 (39%), Gaps = 50/294 (17%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ ++S+ Q G ER R M R P +E N +L
Sbjct: 785 PDLKTWNSLMSAYAQCGCY-------ERARAI----FNTMMRDGPSPTVES----INILL 829
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
+A + + ++ V ++L+ G K S ++ L ++++ R G I E
Sbjct: 830 HALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARA------------GNIFEVK 877
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
+M+ G + T +Y + LC R +DA ++V +++ L I + L +
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 442 SMDGGHIDD---CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
+ I+D + ++Q +K+ EP+ T N ++ +Y R+ R
Sbjct: 938 T----AIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRD--------------RRPE 979
Query: 498 SGYTFLSG-DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
GY + L P TY S++ A E E +++ + G +LD++
Sbjct: 980 EGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRS 1033
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 94/552 (17%), Positives = 217/552 (39%), Gaps = 72/552 (13%)
Query: 127 VLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSG 185
V+ DV G + + W ++R + + L+ L E + WK ++ M ++
Sbjct: 1086 VMKTDV--GVNVKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNP 1143
Query: 186 L-MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
+ + T ++ +++ LG+ RQA+++ Y +K ++ Y ++ +L G+
Sbjct: 1144 ICVVTPTELSDVVRMLGNAKMVRQAITIF---YQIKTRKCQPIAQAYNSMIIMLMHEGQY 1200
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNM 301
+ +++N M + + +PD Y ++ ++G ++L+ M++ +P+ +I M
Sbjct: 1201 EKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTM 1260
Query: 302 --------------------HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
R + PD+ Y ++ + + + F +++
Sbjct: 1261 LIALFFKFNDAHGALSLFEEMRHQY---CRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQ 1317
Query: 342 KSGLKPS-------------AATYGLAMESYR-----RCLLKV-----LVRAFWE-EGKI 377
+ G +P A AM+ ++ RC+ V +++A +E + +
Sbjct: 1318 REGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRA 1377
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+E + M++ G+ ++ Y L C R + AM+++E++ + P +
Sbjct: 1378 SEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDE-KGFPPCPAAYCS 1436
Query: 438 LIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRAN 496
LI + D +FQ +K++C + V A M+K + A +F+E +
Sbjct: 1437 LIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLG 1496
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ PD Y Y++++ A + + M GC D + +L
Sbjct: 1497 CA-------------PDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIIL 1543
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 616
++ G H ++ ++ P + + +L +E+A L+ M F
Sbjct: 1544 NGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFE 1603
Query: 617 ITERQWTELFES 628
++ + E+
Sbjct: 1604 YDLITYSSILEA 1615
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 133/323 (41%), Gaps = 49/323 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G R A+ +L V G K + +Y ++ + K +EA +++ M+
Sbjct: 149 LINGLCKVGQARAALQLLRRVDG---KLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 205
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + PD+ Y ++ VG LK+ + L +M + K PD+
Sbjct: 206 SE-GISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIK---------------PDVY 249
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK---------- 365
+N +++ + K VF + K G+KP+ TY M+ Y CL+K
Sbjct: 250 TFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY--CLVKQVNKANSIFN 307
Query: 366 ---------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+++ F + K++EA+ + M + ++ Y L LC +G
Sbjct: 308 TMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSG 367
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVN 470
+ A+ +V+++ R P IT++ ++ + +D I++ +KD ++
Sbjct: 368 KISYALKLVDEMHD-RGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKG 426
Query: 471 AMLKVYSRNDMFSK--AKELFEE 491
L VY+ M K LF E
Sbjct: 427 YNLDVYAYTVMIQGFCVKGLFNE 449
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 65/343 (18%), Positives = 132/343 (38%), Gaps = 38/343 (11%)
Query: 280 LKELVKLIERMRQKP--SKRIKNMHRKNWDP-VLEPDLVV--------YNAVLNACVPSH 328
L L+ ++ Q P N+ +K +DP V+ ++ Y ++N
Sbjct: 98 LNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVG 157
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
Q + + +++ ++P+ Y ++S C +K+ +NEA M
Sbjct: 158 QARAALQLLRRVDGKLVQPNVVMYNTIIDS--MCKVKL----------VNEAFDLYSEMV 205
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
G+ Y L G+ +DA+ + K+ L + KP TF L+ G +
Sbjct: 206 SEGISPDVVTYSALISGFFIVGKLKDAIDLFNKM-ILENIKPDVYTFNILVDGFCKDGKM 264
Query: 449 DDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
+ ++F MK +PN+ T +++ Y L ++ +ANS T G
Sbjct: 265 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYC----------LVKQVNKANSIFNTMAQGG- 313
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
+ PD +Y+ M+ + + ++K M + + L+ ++GK
Sbjct: 314 --VNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISY 371
Query: 568 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
D + + G P + ++ +L +KA+AL+ +
Sbjct: 372 ALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKL 414
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/402 (20%), Positives = 157/402 (39%), Gaps = 53/402 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M GL+ T L+ L +G + A+++ +W + L + Y ++
Sbjct: 368 MLADGLVPTAVTYSALINQLYVEGRFETALTIFEW---MLSHDSLPNTETYNVIIKGFCS 424
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR--- 297
G +A IF+ ML+ P++ Y+ + + G + ++L+E M+ K
Sbjct: 425 IGYIQKATAIFDQMLK-AGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTW 483
Query: 298 -----IKNMHRKN--------WDPVLE----PDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
I R ++ ++E P++V YNA++N + + +F ++
Sbjct: 484 TYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKM 543
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
+SG PS+ TY + ++ F + +I+EA M ++G++ Y
Sbjct: 544 VESGNVPSSGTYNM------------MISGFSKTNRISEAENFCGKMVKQGLLPNVITYT 591
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 460
LC NGR A + ++K R P T++ LI G +D + + D
Sbjct: 592 SFIDGLCKNGRTSLAFKIFHEMKK-RDYFPNLCTYSSLIDGLCQEGQAEDAERL---LDD 647
Query: 461 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 520
CEPN+ T +++ +A +L E + L+P E Y ++
Sbjct: 648 GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKG-------------LQPSEEIYRAL 694
Query: 521 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
L + E ++ M +G Q + + L+ +A
Sbjct: 695 LVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKA 736
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 133/342 (38%), Gaps = 84/342 (24%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD Y +++ + F +F ++ K G P++ TY L+
Sbjct: 235 PDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTY------------SALINGL 282
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
EG++ EA+ + M +G+ T Y LC+ GR +A+ ++ K+K R P
Sbjct: 283 CSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKK-RGCGPN 341
Query: 432 EITFTGLIIS-SMDG----------------------------------GHIDDCISIFQ 456
T+T LI S DG G + ++IF+
Sbjct: 342 VQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFE 401
Query: 457 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
M H PN T N ++K + KA +F++ +A S P+
Sbjct: 402 WMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPS-------------PNVI 448
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMAL--------SGCQLDQTKHAWLLVEASRAGKCHL 567
TY+ ++ YF+ Y A+ +G +LD +A L+ SR GK
Sbjct: 449 TYNIIIHI--------YFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGK--- 497
Query: 568 LEHA---FDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
LEHA F+ ++E G P+ + + ++ + + + A+AL
Sbjct: 498 LEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALAL 539
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/411 (19%), Positives = 161/411 (39%), Gaps = 58/411 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
YT L++ L + G+ A+ +++ ML D L P Y ++ L G + + + E
Sbjct: 344 TYTALISGLSRDGKFEVAIGVYHKMLAD-GLVPTAVTYSALINQLYVEGRFETALTIFEW 402
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M S P+ YN ++ + +F Q+ K+G P+
Sbjct: 403 MLSHDSL---------------PNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNV 447
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY +++ ++++G +N A+ + M+ G+ Y L
Sbjct: 448 ITY------------NIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRG 495
Query: 410 GRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIG 467
G+ + A + ++ + H P +T+ +I + +DD +++F M + P+ G
Sbjct: 496 GKLEHAFSLFNEM--VEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSG 553
Query: 468 TVNAMLKVYSRNDMFSKAK----ELFEETTRANSSGYT-FLSG------DGAPLK----- 511
T N M+ +S+ + S+A+ ++ ++ N YT F+ G K
Sbjct: 554 TYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEM 613
Query: 512 ------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
P+ TYSS+++ Q E E + GC+ + + L+ G+C
Sbjct: 614 KKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRC 669
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 616
+ + +S+ + G P + +L+ E A+ + ++M F
Sbjct: 670 YEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQ 720
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 15/206 (7%)
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 464
LCN G+ Q+A L++ I + P T+T LII G++D +F M KD C+P
Sbjct: 212 LCNKGKVQEAELIMGHIFH-YGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDP 270
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
N T +A++ +A ++ EE ++P + Y+ + +
Sbjct: 271 NSVTYSALINGLCSEGRLEEAMDMLEEMIDKG-------------IEPTVHAYTIPIVSL 317
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
A + + M GC + + L+ SR GK + + +L G +P
Sbjct: 318 CDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTA 377
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAM 610
+ ++ ++ Q V+ +E A+ + M
Sbjct: 378 VTYSALINQLYVEGRFETALTIFEWM 403
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 151/395 (38%), Gaps = 60/395 (15%)
Query: 205 SWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDI 264
S A VLD +K+K Y L+ L G H AL N +L++ N P +
Sbjct: 104 SIPHAYQVLDR---MKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKE-NFNPTV 159
Query: 265 AAYHS-VAVTLGQVGLLKELVKLIERMRQK-------PSKRIKNMHRKNW-DPVLEP--- 312
Y + TL Q G+ E +KL++ M + P I M R+ + D E
Sbjct: 160 VTYTILIEATLLQGGI-DEAIKLLDEMFEINLQPDVFPYNSIIXMCREGYVDRAFEVISS 218
Query: 313 --------DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR--- 361
D++ YN +L + +W+ F + + G + + TY + + S R
Sbjct: 219 ISSKGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGK 278
Query: 362 -----CLLK---------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
LLK L+ +EG+++ A+ + M G V Y
Sbjct: 279 VEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNT 338
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH 461
+ CLC R +A+ + EK+ + S P ++ + + GH + + M D
Sbjct: 339 ILACLCKQKRADEALSIFEKLGEVGCS-PNASSYNTVFSALGSSGHKVRALGMILEMLDX 397
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
+P++ N+++ R+ M +A EL + +S KP +Y+ +L
Sbjct: 398 VDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSE-----------CKPSVVSYNIVL 446
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ V M GC ++T + +L+
Sbjct: 447 LGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLI 481
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 79/189 (41%), Gaps = 16/189 (8%)
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
I A + M+ +G Y L LC+ G A+ ++ + P +T+T
Sbjct: 105 IPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLK-ENFNPTVVTYT 163
Query: 437 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
LI +++ G ID+ I + M + + +P++ N+++ + R +A FE +
Sbjct: 164 ILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIXM-CREGYVDRA---FEVISSI 219
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
+S GY D TY+ +L + +WE + M GC+ + ++ L
Sbjct: 220 SSKGYAL----------DVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVL 269
Query: 556 LVEASRAGK 564
+ R GK
Sbjct: 270 ISSLCRDGK 278
>gi|15222753|ref|NP_175959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75140283|sp|Q7X6A5.1|PPR81_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g55630
gi|30793841|gb|AAP40373.1| unknown protein [Arabidopsis thaliana]
gi|30794021|gb|AAP40457.1| unknown protein [Arabidopsis thaliana]
gi|110739296|dbj|BAF01561.1| hypothetical protein [Arabidopsis thaliana]
gi|332195155|gb|AEE33276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 477
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 150/379 (39%), Gaps = 47/379 (12%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+ A W G ++ R + Y L+ I + G R+ + M++D YP A
Sbjct: 133 KLAYKFFVWCGGQENFRHTAN--CYHLLMKIFAECGEYKAMCRLIDEMIKDG--YPTTAC 188
Query: 267 -YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
++ + T G+ GL +++V+ + ++ K N+ P YNA+L++ +
Sbjct: 189 TFNLLICTCGEAGLARDVVE--QFIKSKTF---------NYRPYKHS----YNAILHSLL 233
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
Q+K + WV++Q+ + G P TY + M A + GK + +
Sbjct: 234 GVKQYKLIDWVYEQMLEDGFTPDVLTYNIVM------------FANFRLGKTDRLYRLLD 281
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M + G Y L L + A+ ++ ++ + +P I FT LI
Sbjct: 282 EMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREV-GVEPGVIHFTTLIDGLSRA 340
Query: 446 GHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G ++ C + +K C P++ M+ Y KA+E+F+E T
Sbjct: 341 GKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL------ 394
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
P+ +TY+SM+ A +++ + K M GC + ++ L+ AGK
Sbjct: 395 -------PNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGK 447
Query: 565 CHLLEHAFDSLLEAGEIPH 583
++E G H
Sbjct: 448 VLEAHEVVKDMVEKGHYVH 466
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 123/322 (38%), Gaps = 19/322 (5%)
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+L++ F E G+ + M + G TA + L C G +D + K K+
Sbjct: 157 LLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTF 216
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 484
+ +P + ++ ++ S + +++ M +D P++ T N ++ R +
Sbjct: 217 NY-RPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDR 275
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
L +E + DG PD YTY+ +L AT ++ + M G
Sbjct: 276 LYRLLDEMVK-----------DG--FSPDLYTYNILLHHLATGNKPLAALNLLNHMREVG 322
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
+ L+ SRAGK ++ D ++ G P + +T M+ I EKA
Sbjct: 323 VEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAE 382
Query: 605 ALINAM---AYAPFHITERQWTELF-ESNEDRISRDKLEKLLNALCNCNAASSEITVSNL 660
+ M P T F + + + + L+++ + CN N V+NL
Sbjct: 383 EMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNL 442
Query: 661 SRALHALCRSEKERDLSSSAHF 682
A L E +D+ H+
Sbjct: 443 KNAGKVLEAHEVVKDMVEKGHY 464
>gi|356544457|ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 149/378 (39%), Gaps = 51/378 (13%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
W+F MN G+ + E + L+K +G +A+ +L L+ K + VY L
Sbjct: 324 WQFFEKMNGKGVKWGEEVLGALIKSFCVEGLMSEALIILS---ELEKKGVSSNAIVYNTL 380
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP 294
+ K+ R EA +F M + T +L + R+
Sbjct: 381 MDAYCKSNRVEEAEGLFIEM-----------KTKGIKHTEATFNIL-----MYAYSRKMQ 424
Query: 295 SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW-VFKQLRKSGLKPSAATYG 353
+ ++ + + D L+P+ Y +++A + F +++K G+KP++ +Y
Sbjct: 425 PEIVEKLMAEMQDAGLKPNAKSYTCLISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSY- 483
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
L+ A+ G +A AA NM++ G+ + Y L G Q
Sbjct: 484 -----------TALIHAYSVSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQ 532
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID---DCISIFQHMKDHCEPNIGTVN 470
M + + ++ + + +TF L+ GH D IS F ++ H P + T N
Sbjct: 533 TLMKIWKLMRRYK-VEGTRVTFNTLVDGFAKHGHYKEARDVISKFANVGLH--PTVMTYN 589
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
++ Y+R SK EL EE N LKPD TYS+M+ A +
Sbjct: 590 MLMNAYARGGQHSKLPELLEEMAAHN-------------LKPDSVTYSTMIYAFLRVRDF 636
Query: 531 EYFEYVYKGMALSGCQLD 548
+ ++ M SG +D
Sbjct: 637 SQAFFYHQEMVKSGQVID 654
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 147/360 (40%), Gaps = 55/360 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT ++ +L KAGR EA +F M + ++ P AY+++ + G G ++ KL+ER+
Sbjct: 21 YTSMIWVLCKAGRLGEAEELFAQMEAERSV-PCAYAYNTMIMGYGSAGRFEDAYKLLERL 79
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R++ P +V +N++L + +F+ ++K +P+++
Sbjct: 80 RERGCI---------------PSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSS 123
Query: 351 TYGLAM----------ESYR-------------RCLLKVLVRAFWEEGKINEAVAAVRNM 387
TY + + E+YR + ++V + K+ EA +
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 183
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
QRG Y L L G+ +A + EK+ H+ + +T LI + G
Sbjct: 184 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNAN-PVVYTSLIRNFFIHGR 242
Query: 448 IDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
+D IF+ + + C+P++ +N + + K + +FE+ Y FL
Sbjct: 243 KEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDI-----RSYGFL--- 294
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
PD +YS ++ A Q ++ M G LD + ++ ++GK H
Sbjct: 295 -----PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 349
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 110/255 (43%), Gaps = 26/255 (10%)
Query: 337 FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
F +L+ GLKP +Y ++ VL +A G++ EA ME V A
Sbjct: 6 FHELKAQGLKPDDVSY--------TSMIWVLCKA----GRLGEAEELFAQMEAERSVPCA 53
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
Y + + GR++DA ++E+++ R P ++F ++ +D+ +S+F+
Sbjct: 54 YAYNTMIMGYGSAGRFEDAYKLLERLRE-RGCIPSVVSFNSILTCLGKKRKVDEALSLFE 112
Query: 457 HMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
MK EPN T N ++ + +A + +E A+ L P+ T
Sbjct: 113 VMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHAS-------------LFPNLLT 159
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
+ M++ A + E +++ + GC D + L+ + G+ F+ +L
Sbjct: 160 VNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKML 219
Query: 577 EAGEIPHPLFFTEML 591
+AG +P+ +T ++
Sbjct: 220 DAGHNANPVVYTSLI 234
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 123/280 (43%), Gaps = 33/280 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G R+ ++ + +K + Y ++ K+G+ H+A I M
Sbjct: 303 LIHGLTKAGQARETSNIF---HAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 359
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E C + P +A Y ++ L ++ L E L E + K +E ++V
Sbjct: 360 EKC-VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKG---------------IELNVV 403
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+Y+++++ + + + +++ K GL P+ T+ LL LV+A EE
Sbjct: 404 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTW--------NSLLDALVKA--EE- 452
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
INEA+ ++M++ Y L LC ++ A + + ++ + P +T+
Sbjct: 453 -INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQK-QGLVPNVVTY 510
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLK 474
T +I G+I D S+F+ K + P+ + NA+++
Sbjct: 511 TTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIE 550
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 91/479 (18%), Positives = 179/479 (37%), Gaps = 106/479 (22%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G G + A +L+ L+++ + S + +L LGK + EAL +F +M
Sbjct: 59 MIMGYGSAGRFEDAYKLLER---LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK 115
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+D P+ + Y+ + L G ++E ++++ M L P+L+
Sbjct: 116 KDAE--PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHAS---------------LFPNLL 158
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY----------GLAMESYRR---- 361
N +++ + + + + +F+ + G P TY G E+YR
Sbjct: 159 TVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM 218
Query: 362 ---------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
+ L+R F+ G+ + + + +RG ++ C+ G
Sbjct: 219 LDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEV 278
Query: 413 QDAMLVVEKIKS---LRHSKPLEITFTGL-----------IISSM--------------- 443
+ ++ E I+S L + I GL I +M
Sbjct: 279 EKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAV 338
Query: 444 -DG----GHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
DG G + I + MK+ C +P + T A++ ++ D +A LFEE A S
Sbjct: 339 VDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE---AKS 395
Query: 498 SGY--------TFLSGDG-----------------APLKPDEYTYSSMLEASATAHQWEY 532
G + + G G L P+ YT++S+L+A A +
Sbjct: 396 KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINE 455
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
++ M C + ++ L+ R K + + + + G +P+ + +T M+
Sbjct: 456 ALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMI 514
>gi|326527817|dbj|BAJ88981.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/371 (19%), Positives = 153/371 (41%), Gaps = 46/371 (12%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + +W + M + G+ L++ D G W++A ++ + +
Sbjct: 162 LLLDAYARAGRLEDSWWVLGEMKRWGIRLDTAGYSTLVRLYRDSGMWKKATDLIMEMQEV 221
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ D+K +Y L+ GK G+ +A ++F M + PDI ++++ +VG
Sbjct: 222 GVELDVK---IYNGLIDTFGKYGQLADARKMFEKM-RGQGIKPDIETWNALIRWHCRVGN 277
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+K ++ + M+++ + PD ++ ++N +W + +F +
Sbjct: 278 MKRALRFLAAMQEEG---------------MYPDPKIFITIINKLGEQGKWDELKELFDK 322
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+R G K S A Y VLV + + G +A V ++ + + S++
Sbjct: 323 MRNRGFKESGAIYA------------VLVDIYGQYGHFRDAQECVAALKAENLQLSPSIF 370
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
LA G + + V++ +++ +P + LI + G + ++FQH+K
Sbjct: 371 CVLANAYAQQGLCEQTVSVLQLMEA-EGIEPNLVMLNLLINAFSTAGRHLEAQAVFQHIK 429
Query: 460 DH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
D P++ T ++K + R + K E++ E RA + PD
Sbjct: 430 DSGMSPDVVTYTTLMKAFMRVKRYEKVSEVYSEMERAGCT-------------PDRKARE 476
Query: 519 SMLEASATAHQ 529
+ +AS T Q
Sbjct: 477 MLHDASVTMEQ 487
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/299 (20%), Positives = 121/299 (40%), Gaps = 48/299 (16%)
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+++ + D+ Y+ + T G+ G L + K+ E+MR + K PD+
Sbjct: 218 MQEVGVELDVKIYNGLIDTFGKYGQLADARKMFEKMRGQGIK---------------PDI 262
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+NA++ K +++ G+ P + ++ E+
Sbjct: 263 ETWNALIRWHCRVGNMKRALRFLAAMQEEGMYPDPKIF------------ITIINKLGEQ 310
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
GK +E M RG + ++Y L G ++DA V +K+ + L+++
Sbjct: 311 GKWDELKELFDKMRNRGFKESGAIYAVLVDIYGQYGHFRDAQECVAALKA----ENLQLS 366
Query: 435 ---FTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
F L + G + +S+ Q M+ + EPN+ +N ++ +S +A+ +F+
Sbjct: 367 PSIFCVLANAYAQQGLCEQTVSVLQLMEAEGIEPNLVMLNLLINAFSTAGRHLEAQAVFQ 426
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
SG + PD TY+++++A ++E VY M +GC D+
Sbjct: 427 HI---KDSG----------MSPDVVTYTTLMKAFMRVKRYEKVSEVYSEMERAGCTPDR 472
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 168/411 (40%), Gaps = 52/411 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L +G A+ V+D + L+D + + YT L+ G +A+R+ + M+
Sbjct: 187 LIGSLCARGKLDLALKVMDQL--LEDNCN-PTVITYTILIEATIIHGSIDDAMRLLDEMM 243
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK--------------RIKNM 301
L PD+ Y+ + + + GL+ + + + PS R +
Sbjct: 244 SR-GLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAG 302
Query: 302 HRKNWDPVL---EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
R D ++ EP++V Y+ ++++ + V + +++ GL P A Y
Sbjct: 303 ERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCY------ 356
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
L+ AF +EGK++ A+ V +M G + Y + LC GR +A+ +
Sbjct: 357 ------DPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNI 410
Query: 419 VEKIKSLRHSKPLEI--TFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVY 476
+K++ + T G + SS G I I + + + +P+ T N+++
Sbjct: 411 FKKLEEVGCPPNASSYNTMFGALWSS--GDKIRALTMILEMLSNGVDPDRITYNSLISSL 468
Query: 477 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
R+ M +A L + R +P +Y+ +L AH+ V
Sbjct: 469 CRDGMVDEAIGLLVDMERTE-------------WQPTVISYNIVLLGLCKAHRIVDAIEV 515
Query: 537 YKGMALSGCQLDQTKHAWLLVEASRAG-KCHLLEHAFDSLLEAGEIPHPLF 586
M +GCQ ++T + L+ AG + + +E A SL+ I LF
Sbjct: 516 LAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELA-KSLVSMNAISQDLF 565
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/304 (18%), Positives = 119/304 (39%), Gaps = 31/304 (10%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+PD+++ ++ S + + V + L + G P + Y ++
Sbjct: 109 KPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG-DPDSFAY------------NAVISG 155
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
F + + A + M+ RG Y L LC G+ A+ V++++ + P
Sbjct: 156 FCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLE-DNCNP 214
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
IT+T LI +++ G IDD + + M +P++ T N +++ + + +A F
Sbjct: 215 TVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRA---F 271
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
E + N++ P Y+ +L+ +WE E + M + GC+ +
Sbjct: 272 EFVSNLNTT-------------PSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNI 318
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
++ L+ R GK + E G P + ++ + + A+ ++
Sbjct: 319 VTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDD 378
Query: 610 MAYA 613
M A
Sbjct: 379 MISA 382
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 87/427 (20%), Positives = 168/427 (39%), Gaps = 58/427 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + ++ L K G EA +F + ++ PD+ Y+S+ G+ G L+E+ L+
Sbjct: 200 FTFNIVIDFLCKQGELVEARALF-VRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVS 258
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW-KGVFWVFKQLRKSGLKP 347
MR+ D+V YNA++N C W + + F ++++ G+
Sbjct: 259 EMRKSGCA---------------ADVVTYNALIN-CFSKFGWIEKAYSYFGEMKRLGVMA 302
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+ T L V AF +EG + EA+ M RG++ Y L C
Sbjct: 303 NVVT------------LSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTC 350
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI---DDCISIFQHMKDHCEP 464
GR DA+++++++ + P +T+T ++ G + DD +S+ + + +
Sbjct: 351 KAGRLDDAIVLLDEMVH-QGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLME--RAGVKA 407
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG------------------- 505
N ++ + N +A +L E L G
Sbjct: 408 NELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLL 467
Query: 506 ---DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
D L+P+ Y+++++A A + + + SG Q + + L+ +A
Sbjct: 468 HKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKA 527
Query: 563 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQW 622
G + FD + E G P+ +T ++ + KAV L+N M + + +
Sbjct: 528 GSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVY 587
Query: 623 TELFESN 629
T L + +
Sbjct: 588 TSLIDGH 594
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 130/320 (40%), Gaps = 37/320 (11%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L++ S+ K + + M + G+M + + +G R+AM + ++
Sbjct: 275 LINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQ---MR 331
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQV 277
+ + + F YT L+ KAGR +A+ + + M+ L P++ Y + L G+V
Sbjct: 332 VRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ-GLVPNVVTYTVMVDGLCKEGKV 390
Query: 278 GLLKELVKLIER-----------------MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAV 320
+ +++ L+ER K S+R ++ + + +E D+ +Y +
Sbjct: 391 AVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTL 450
Query: 321 LNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA 380
+ + + ++ GL+P+ Y M+ AF++ GK +EA
Sbjct: 451 IWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMD------------AFFKAGKESEA 498
Query: 381 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 440
VA + + G+ Y L LC G +A+ +K++ L +++ +T LI
Sbjct: 499 VALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQV-YTTLID 557
Query: 441 SSMDGGHIDDCISIFQHMKD 460
G + + + M D
Sbjct: 558 GFCKIGSLSKAVHLMNEMVD 577
>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 706
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 86/442 (19%), Positives = 166/442 (37%), Gaps = 70/442 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKGL W A +++ + D + L+ ++G A+ I + M
Sbjct: 196 LLKGLCSAKQWGDAEELVEEMTRNDSPPD---DLTFGMLIHSFCQSGLVDRAMGILDRM- 251
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
C P Y+ + ++G +KE + L M KP D+
Sbjct: 252 SKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMPCKP------------------DIF 293
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG-----LAMESYRRCLLKV---- 366
YNAVL + +W+ + ++ + P T+ L + C L+V
Sbjct: 294 SYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQM 353
Query: 367 --------------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
L+ AF E+G + +A+ +R+M Y + LC +G+W
Sbjct: 354 PKYGRKPDNFTYSALINAFSEQGCVEDALELLRSMP---CSPNTVCYKSVLKGLCRDGQW 410
Query: 413 QD-AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC-ISIFQHMKDH-CEPNIGTV 469
+D L+ E +++ P E+ F GLII + + DC + + Q + ++ C P++
Sbjct: 411 EDVGQLIGEMVRN--DCAPDEMVF-GLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMY 467
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
++L ++ + +LF+ T KP+ TY+ +L
Sbjct: 468 TSLLNGFAEYGRVDDSLKLFKSMT----------------CKPNTVTYNYVLMGLCKVEL 511
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
WE + M C ++ + L+ + G F+ + G P+ + ++
Sbjct: 512 WEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYST 571
Query: 590 MLIQAIVQSNYEKAVALINAMA 611
+ + + A+ L+N M+
Sbjct: 572 LNNGLSEKGCVDNALKLLNNMS 593
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 99/495 (20%), Positives = 185/495 (37%), Gaps = 103/495 (20%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +AM +LD + VY ++++ + GR EAL +F+ M
Sbjct: 231 LIHSFCQSGLVDRAMGILDR---MSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCM- 286
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKN------MHRKNW 306
PDI +Y++V L + ++ +LI M +K P + N H+
Sbjct: 287 ---PCKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLV 343
Query: 307 DPVLE-----------PDLVVYNAVLNA------------------CVPSH--------- 328
D LE PD Y+A++NA C P+
Sbjct: 344 DCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSMPCSPNTVCYKSVLKG 403
Query: 329 -----QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-----CLLKVL----------- 367
QW+ V + ++ ++ P +GL ++ + C L+VL
Sbjct: 404 LCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPD 463
Query: 368 -------VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
+ F E G++++++ ++M + T + Y L LC W+DA +++
Sbjct: 464 VVMYTSLLNGFAEYGRVDDSLKLFKSMTCKP--NTVTYNYVLMG-LCKVELWEDAGKLID 520
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRN 479
++ + P E+TF+ LI S G ++ I +F+ M+ + C PN+ + + S
Sbjct: 521 EMVG-QECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLNNGLSEK 579
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
A +L + K D YSS L+ A WE +
Sbjct: 580 GCVDNALKLLNNMS----------------CKADTICYSSALKGLCRAELWEDAGELIVE 623
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
M C D+ + ++ + G D +L+ P+ + ++ ++ +
Sbjct: 624 MFRKDCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYSSLINGFSEHGH 683
Query: 600 YEKAVALINAMAYAP 614
E A+ L+ +M P
Sbjct: 684 LEDALKLLRSMPCEP 698
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 123/344 (35%), Gaps = 70/344 (20%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P+ YN +L + QW + +++ ++ P T+G+ L+ +F
Sbjct: 188 PNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGM------------LIHSF 235
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACC-------------------------- 405
+ G ++ A+ + M + G A VY E+ C
Sbjct: 236 CQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMPCKPDIFSY 295
Query: 406 ------LCNNGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
LC RW+DA L+ E ++ + P E+TF +I G +D + + M
Sbjct: 296 NAVLKGLCRAERWEDAGELITEMVR--KDCSPDEVTFNTVISFLCHKGLVDCALEVVDQM 353
Query: 459 KDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTY 517
+ +P+ T +A++ +S A EL P P+ Y
Sbjct: 354 PKYGRKPDNFTYSALINAFSEQGCVEDALELLRSM----------------PCSPNTVCY 397
Query: 518 SSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
S+L+ QWE + M + C D+ ++ + G L++ + L E
Sbjct: 398 KSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRG---LVDCGLEVLQE 454
Query: 578 A---GEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHIT 618
G P + +T +L + ++ L +M P +T
Sbjct: 455 VPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSMTCKPNTVT 498
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 97/251 (38%), Gaps = 21/251 (8%)
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
L+ + G++ +A V +M + Y L LC+ +W DA +VE++ +
Sbjct: 162 NTLIAGYCRGGRLEDARLLVASMPP---APNSYAYNTLLKGLCSAKQWGDAEELVEEM-T 217
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFS 483
S P ++TF LI S G +D + I M K C P N ++ ++
Sbjct: 218 RNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVK 277
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
+A LF P KPD ++Y+++L+ A +WE + M
Sbjct: 278 EALHLFS----------------CMPCKPDIFSYNAVLKGLCRAERWEDAGELITEMVRK 321
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
C D+ ++ G D + + G P ++ ++ Q E A
Sbjct: 322 DCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDA 381
Query: 604 VALINAMAYAP 614
+ L+ +M +P
Sbjct: 382 LELLRSMPCSP 392
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 108/274 (39%), Gaps = 49/274 (17%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+ Y ++ S + VF+QL G +P TY L+
Sbjct: 87 PDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY------------SCLIDGL 134
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYE-LACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+EG++ EA+ M + G +V Y L C G+ +AM ++E++ S P
Sbjct: 135 CKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET-GSSP 193
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+T+T L+ +DD + M + PN+ T +++ R + S A +
Sbjct: 194 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHIL 253
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE-----------------Y 532
E R + S P YTY+++L+ +Q E
Sbjct: 254 GEMRRKSCS-------------PTVYTYNTILDGYCRVNQLEEARKFMLEEMDCPPNVVS 300
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
F + +G+ C+++++ A LVE +R +C+
Sbjct: 301 FNIMIRGL----CKVNRSSEAMELVEEARRRRCN 330
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/380 (18%), Positives = 141/380 (37%), Gaps = 80/380 (21%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+ L + E ++ + + M SG + L+ G A+ V + +
Sbjct: 60 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 119
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
+ D+ Y+ L+ L K GR EA+ +F M++ + P+ Y+S+ ++G +
Sbjct: 120 FRPDV---VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 176
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E + L+ERM + S PD+V Y ++N + + + Q+
Sbjct: 177 DEAMNLLERMAETGSS---------------PDVVTYTTLMNGFCKLARLDDAYDLLNQM 221
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYY 400
+ GL P+ T+ M+ R E ++++AV + M ++ T Y
Sbjct: 222 TRKGLTPNVVTFTSLMDGLCR------------ENRLSDAVHILGEMRRKSCSPTVYTYN 269
Query: 401 ELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD 460
+ D V +++ R ++ MD
Sbjct: 270 TIL----------DGYCRVNQLEEARK----------FMLEEMD---------------- 293
Query: 461 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM 520
C PN+ + N M++ + + S+A EL EE R + PD Y+++
Sbjct: 294 -CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCN-------------PDVVMYTTV 339
Query: 521 LEASATAHQWEYFEYVYKGM 540
++ + + VY+ M
Sbjct: 340 IDVLCREKKVDEACRVYRKM 359
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 129/319 (40%), Gaps = 31/319 (9%)
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL---KELVKLIERMRQKPSKRIK-NMHRKN 305
I+ +++ C +I + +G++GL+ + LI + + K+ M+ K
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM 259
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
+ + P+L YN V+N + K F VF ++R+ G+ + TY
Sbjct: 260 QEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTY------------N 307
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
L+ E K+NEA V M+ G+ Y L C G+ A+ + +KS
Sbjct: 308 TLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKS- 366
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
R P +T+ L+ G + + M++ +P+ T ++ ++R+D K
Sbjct: 367 RGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEK 426
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A +L LS + L PD +TYS ++ Q ++K M
Sbjct: 427 AIQLR-------------LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 545 CQLDQTKHAWLLVEASRAG 563
C+ ++ + +++ + G
Sbjct: 474 CEPNEVIYNTMILGYCKEG 492
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 137/335 (40%), Gaps = 44/335 (13%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M + GL+ E L+ GL G +Q + + +++ + + Y ++ L K
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYE---KMQEDGVFPNLYTYNCVMNQLCK 280
Query: 241 AGRPHEALRIFNLMLE---DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KP 294
GR +A ++F+ M E CN I Y+++ L + L E K++++M+ P
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCN----IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 295 SKRIKNMHRKNWDPV-----------------LEPDLVVYNAVLNACVPSHQWKGVFWVF 337
+ N + V L P LV YN +++ G +
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
K++ + G+KPS TY +L+ F + +A+ +ME+ G+V
Sbjct: 397 KEMEERGIKPSKVTY------------TILIDTFARSDNMEKAIQLRLSMEELGLVPDVH 444
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y L C G+ +A + + + ++ +P E+ + +I+ G + + +
Sbjct: 445 TYSVLIHGFCIKGQMNEASRLFKSMVE-KNCEPNEVIYNTMILGYCKEGSSYRALKLLKE 503
Query: 458 MKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
M++ PN+ + M++V + +A+ L E+
Sbjct: 504 MEEKELAPNVASYRYMIEVLCKERKSKEAERLVEK 538
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 81/398 (20%), Positives = 161/398 (40%), Gaps = 59/398 (14%)
Query: 304 KNWDPVLE-------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY---- 352
K++D ++E P++V+Y +++ C + + +F ++ K GL + TY
Sbjct: 181 KSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLI 240
Query: 353 -GL--------AMESYRR--------------CLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
GL E Y + C++ L + +G+ +A M +
Sbjct: 241 NGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK----DGRTKDAFQVFDEMRE 296
Query: 390 RGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID 449
RGV Y L LC + +A VV+++KS P IT+ LI G +
Sbjct: 297 RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKS-DGINPNLITYNTLIDGFCGVGKLG 355
Query: 450 DCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGA 508
+S+ + +K P++ T N ++ + R S A ++ +E
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG------------ 403
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
+KP + TY+ +++ A + E + M G D ++ L+ G+ +
Sbjct: 404 -IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 569 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTEL 625
F S++E P+ + + M++ + + +A+ L+ M AP + R E+
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEV 522
Query: 626 FESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA 663
++R S++ E+L+ + + S +S +SRA
Sbjct: 523 L--CKERKSKEA-ERLVEKMIDSGIDPSTSILSLISRA 557
>gi|297853270|ref|XP_002894516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340358|gb|EFH70775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 477
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 141/355 (39%), Gaps = 45/355 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA-YHSVAVTLGQVGLLKELVKLIER 289
Y L+ I + G R+ + M++D YP A ++ + T G+ GL +++V+ +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDG--YPTTACTFNLLICTCGEAGLARDVVE--QF 210
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
++ K N+ P YNA+L++ + Q+K + WV++Q+ + G P
Sbjct: 211 IKSKTF---------NYRPYKHS----YNAILHSLLGVKQYKLIDWVYEQMLEDGFSPDV 257
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY + M A + GK + + M + G Y L L
Sbjct: 258 LTYNIVM------------FANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATG 305
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
+ A+ ++ ++ + +P I FT L+ G ++ C M K C P++
Sbjct: 306 NKPLAALNLLTHMREV-GVEPGVIHFTTLVDGLSRAGKLEACKYFMDEMVKVGCTPDVVC 364
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
M+ Y KA+E+F+E T P+ +TY+SM+ A
Sbjct: 365 YTVMITGYISGGELEKAEEMFKEMTEKGQ-------------LPNVFTYNSMIRGFCMAG 411
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
+++ + K M GC + ++ L+ AGK ++E G H
Sbjct: 412 KFKEACSLLKEMESRGCNPNFVVYSTLVNNLRNAGKVLEAHEIVKDMVEKGHYVH 466
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 124/322 (38%), Gaps = 19/322 (5%)
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+L++ F E G+ + M + G TA + L C G +D + K K+
Sbjct: 157 LLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTF 216
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 484
+ +P + ++ ++ S + +++ M +D P++ T N ++ R +
Sbjct: 217 NY-RPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFSPDVLTYNIVMFANFRLGKTDR 275
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
L +E + DG PD YTY+ +L AT ++ + M G
Sbjct: 276 LYRLLDEMVK-----------DG--FSPDLYTYNILLHHLATGNKPLAALNLLTHMREVG 322
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
+ L+ SRAGK ++ D +++ G P + +T M+ I EKA
Sbjct: 323 VEPGVIHFTTLVDGLSRAGKLEACKYFMDEMVKVGCTPDVVCYTVMITGYISGGELEKAE 382
Query: 605 ALINAM---AYAPFHITERQWTELF-ESNEDRISRDKLEKLLNALCNCNAASSEITVSNL 660
+ M P T F + + + + L+++ + CN N V+NL
Sbjct: 383 EMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACSLLKEMESRGCNPNFVVYSTLVNNL 442
Query: 661 SRALHALCRSEKERDLSSSAHF 682
A L E +D+ H+
Sbjct: 443 RNAGKVLEAHEIVKDMVEKGHY 464
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 155/403 (38%), Gaps = 57/403 (14%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A SVL + L + D + + L + GK G EAL +F+ M+++ P++ Y
Sbjct: 119 AFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIG---EALHLFDKMIDE-GFQPNVVTYG 174
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L +VG ++L+ M Q +PD+V+Y +++++
Sbjct: 175 TLINGLCKVGNTSAAIRLLRSMEQGNC---------------QPDVVIYTSIIDSLCKDR 219
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
Q F +F Q+ G+ P TY LV A + + M
Sbjct: 220 QVTEAFNLFSQMVGQGISPDIFTY------------TSLVHALCNLCEWKHVTTLLNQMV 267
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
++ ++ + LC G+ +A +V+ + R +P +T+T L+ +
Sbjct: 268 NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ-RGVEPDVVTYTTLMDGHCLQSEM 326
Query: 449 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR----ANSSGY-TF 502
D+ + +F M + P++ + ++ Y + KA LFEE R ++ Y T
Sbjct: 327 DEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 386
Query: 503 LSG--------DGAPL---------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+ G D L PD TYS +L++ E + K + S
Sbjct: 387 MYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNL 446
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
D + ++ RAG+ F +L G HP +T
Sbjct: 447 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKG--LHPSVWT 487
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 137/327 (41%), Gaps = 48/327 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L + W+ ++L+ + + + L +++ ++ L K G+ EA I ++M+
Sbjct: 246 LVHALCNLCEWKHVTTLLN---QMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + PD+ Y ++ + E VK+ + M +K PD++
Sbjct: 303 QR-GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG---------------FAPDVI 346
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y ++N H+ ++F+++ + P TY M Y C + G
Sbjct: 347 SYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLM--YGLCHV----------G 394
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
++ +A+A M RG + Y L LC N ++AM +++ I++ + +++
Sbjct: 395 RLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVY- 453
Query: 436 TGLIISSM-DGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
+II M G ++ +F ++ P++ T N M+ + + ++A +LF E
Sbjct: 454 -NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM- 511
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSM 520
DG PD TY+++
Sbjct: 512 ------------DGNDCSPDGCTYNTI 526
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/371 (17%), Positives = 144/371 (38%), Gaps = 30/371 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P +V + +L + + V + Q+ G+ P+ T L +L+ +F
Sbjct: 63 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYT------------LNILINSF 110
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
++ A + + + + G + + L LC G+ +A+ + +K+ +P
Sbjct: 111 CHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID-EGFQPN 169
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+T+ LI G+ I + + M + +C+P++ +++ ++ ++A LF
Sbjct: 170 VVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFS 229
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ G + PD +TY+S++ A +W++ + M S D
Sbjct: 230 QMV-------------GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVV 276
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ ++ + GK D +++ G P + +T ++ +QS ++AV + + M
Sbjct: 277 IFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 336
Query: 611 AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRS 670
F +T L DK L +C T + L ++ LC
Sbjct: 337 VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL---MYGLCHV 393
Query: 671 EKERDLSSSAH 681
+ +D + H
Sbjct: 394 GRLQDAIALFH 404
>gi|358348674|ref|XP_003638369.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355504304|gb|AES85507.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 501
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 140/361 (38%), Gaps = 73/361 (20%)
Query: 242 GRPHEAL-RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
G+ ++A R FN+++ C G+ GL K LV ER + S
Sbjct: 189 GKGYKATARTFNILIRTC----------------GEAGLAKTLV---ERFIKSKSF---- 225
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ-LRKSGLKPSAATYGLAMESY 359
N+ P YNA+L++ + +Q+K + WV++Q L G TY
Sbjct: 226 ----NYRPFKHS----YNAILHSFLVLNQYKLIEWVYEQMLLDGGFSSDILTY------- 270
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN---------- 409
+++ A + GK+++ + + M++ G Y L +
Sbjct: 271 -----NIVIYAKYRLGKVDQVLTLLGEMDRNGFSPDFHTYNILLHAISKGDIGKGDLDKE 325
Query: 410 --GRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEP 464
G+ ++ ++ + +R + +P + FT LI G +D C F MK + C P
Sbjct: 326 DLGKEKEQFKALKLLNYMRETGIEPTVLHFTTLIDGFSRAGKLDACQYFFNEMKKNGCMP 385
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
++ M+ Y KA+E+FEE L P+ +TY+SM+
Sbjct: 386 DVVAYTVMITGYVVARELEKAQEMFEEML-------------SKELVPNVFTYNSMIRGL 432
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
A +++ ++K M GC + + L+ AG+ + E G+ H
Sbjct: 433 CMAGKFDEACSMFKEMERKGCSPNSVVYITLVSCLRNAGRVADAREVIKQMTETGKYAHL 492
Query: 585 L 585
L
Sbjct: 493 L 493
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 75/185 (40%), Gaps = 28/185 (15%)
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
LGK +AL++ N M E + P + + ++ + G L M++
Sbjct: 327 LGKEKEQFKALKLLNYMRET-GIEPTVLHFTTLIDGFSRAGKLDACQYFFNEMKKNGCM- 384
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
PD+V Y ++ V + + + +F+++ L P+ TY
Sbjct: 385 --------------PDVVAYTVMITGYVVARELEKAQEMFEEMLSKELVPNVFTY----- 425
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
++R GK +EA + + ME++G + VY L CL N GR DA
Sbjct: 426 -------NSMIRGLCMAGKFDEACSMFKEMERKGCSPNSVVYITLVSCLRNAGRVADARE 478
Query: 418 VVEKI 422
V++++
Sbjct: 479 VIKQM 483
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 157/394 (39%), Gaps = 48/394 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLKELVK 285
+ LL +A R EAL I + PD+ +Y + +L G+ G +L++
Sbjct: 160 IIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 219
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
++ V P++V YN V++ +FK++ + G+
Sbjct: 220 MMAE----------------GGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI 263
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
P TY +V A + +++A A +R M + V+ Y L
Sbjct: 264 PPDLVTY------------NSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYG 311
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSK-PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE- 463
+ G+W++A+ V ++++ RHS P +T + L+ S G I + +F M +
Sbjct: 312 YSSTGQWKEAVRVFKEMR--RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 369
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
P++ + N ML Y+ +LF+ + GDG + PD YT++ +++A
Sbjct: 370 PDVFSYNIMLNGYATKGCLVDMTDLFD-----------LMLGDG--IAPDFYTFNVLIKA 416
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
A + ++ M G + D + ++ R GK F+ +++ G P
Sbjct: 417 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 476
Query: 584 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHI 617
+ ++ + KA LI+ + H+
Sbjct: 477 KYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHL 510
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 166/427 (38%), Gaps = 60/427 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV--YTKLLAILGKAGRPHEALRIFNL 253
LLK L D+G QA +L + + + S V Y ++ K G ++A +F
Sbjct: 201 LLKSLCDQGKSGQADDLLRM---MAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKE 257
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M++ + PD+ Y+SV L + + + K +RQ +KR+ NW
Sbjct: 258 MVQR-GIPPDLVTYNSVVHALCKA---RAMDKAEAFLRQMVNKRVLP---NNW------- 303
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
YN ++ + QWK VFK++R+ + P T L +L+ + +
Sbjct: 304 --TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVT------------LSMLMGSLCK 349
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVY------YELACCLCNNGRWQDAMLVVEKIKSLRH 427
GKI EA M +G Y Y CL + D ML
Sbjct: 350 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG-------DG 402
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 486
P TF LI + + G +D + IF M+DH +P++ T ++ R A
Sbjct: 403 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 462
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
E F + + PD+Y Y+ +++ T + + + +G
Sbjct: 463 EKFNQMIDQG-------------VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 509
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
LD + ++ + G+ ++ FD + G P + ++ ++ + EKA+ +
Sbjct: 510 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRV 569
Query: 607 INAMAYA 613
+AM A
Sbjct: 570 FDAMVSA 576
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 167/411 (40%), Gaps = 75/411 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K + G +AM + + + K D+ + Y ++A L + G+ +A+ FN M+
Sbjct: 413 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVT---YRTVIAALCRIGKMDDAMEKFNQMI 469
Query: 256 EDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLI------------ERMRQKPSKRIKN 300
D + PD AY+ + T G + KEL+ I + K +
Sbjct: 470 -DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 528
Query: 301 MHRKNW-----DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
M +N + L PD VVY+ +++ + + VF + +G++P+ Y
Sbjct: 529 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVY--- 585
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
C LV + + G+I+E ++ R M QRG+ + +Y + +G +Q
Sbjct: 586 ------C---TLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIII-----DGLFQAG 631
Query: 416 MLVVEKIKSLRHSK---PLEITFTGLIISSMDGGH-IDDCISIFQHMKD-HCEPNIGTVN 470
V K+K ++ ++I +++ + D+ I +F+ ++ + + NI T+N
Sbjct: 632 RTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 691
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
M+ + +AK+LF +R+ L P+ TYS M+
Sbjct: 692 TMIDGMFQTRRVEEAKDLFASISRSR-------------LVPNVVTYSIMITNLIKEGLV 738
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
E E ++ M +GC+ + LL H LL+ EI
Sbjct: 739 EEAEDMFSSMQNAGCEPNS----------------RLLNHVVRELLKKNEI 773
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 108/286 (37%), Gaps = 28/286 (9%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLV 368
VL P Y +++ C +H+ + F QL ++GL+ + + L+
Sbjct: 119 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNII------------IANHLL 166
Query: 369 RAFWEEGKINEAV-AAVRNMEQRGVVGTASVYYELACCLCNNGR-WQDAMLVVEKIKSLR 426
F E + +EA+ + + G V Y L LC+ G+ Q L+ +
Sbjct: 167 EGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGA 226
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
P + + +I G ++ +F+ M + P++ T N+++ + KA
Sbjct: 227 VCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKA 286
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+ + + P+ +TY++++ ++ QW+ V+K M
Sbjct: 287 EAFLRQMVNKR-------------VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 333
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
D + L+ + GK FD++ G+ P + ML
Sbjct: 334 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 379
>gi|298712094|emb|CBJ26674.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 838
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 122/274 (44%), Gaps = 42/274 (15%)
Query: 187 MFTEGQMLKL-LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH 245
+ T+G+ + +K LGD G +A+ +L+ +++ R + F YT + K G
Sbjct: 67 LVTDGRPYTVAIKALGDNGKTEEALKLLE---SMREGRIPPNEFSYTAAASACAKTGDWK 123
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
ALR+ M E L P+ Y + G+ G L+ + L++ MR K
Sbjct: 124 GALRLLGQMREKDGLEPNEFTYTAAVTACGRGGNLEAALSLLDGMRGKG----------- 172
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR---C 362
+ P+ YN+ ++AC +WK + ++++ G+ P+ TY A ++ + C
Sbjct: 173 ----VSPNCFTYNSAIHACARKGKWKLALELIERMKADGVTPNLTTYSSAADACAKGGNC 228
Query: 363 L--LKVL--VRAF-WEEGKI-----NEAVAAV----------RNMEQRGVVGTASVYYEL 402
+ LK+L VR+ +E G+I EA AAV M + GV + + Y
Sbjct: 229 VAALKILEEVRSLDFEVGEILYNSVMEACAAVGQTKLSLSLLETMRKDGVKPSPATYTTA 288
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
W+ A+L++ +++ S+ L++ T
Sbjct: 289 ITACGRTADWKRALLLLVEMRKSFPSRALDVNRT 322
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 115/298 (38%), Gaps = 56/298 (18%)
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+W+ V +++R GL Y V ++A + GK EA+ + +M
Sbjct: 51 RWRDVVPALEEMRSLGLVTDGRPY------------TVAIKALGDNGKTEEALKLLESMR 98
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
+ + Y A G W+ A+ ++ +++ +P E T+T + + GG++
Sbjct: 99 EGRIPPNEFSYTAAASACAKTGDWKGALRLLGQMREKDGLEPNEFTYTAAVTACGRGGNL 158
Query: 449 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
+ +S+ M+ PN T N+ + +R + A EL E R + G T
Sbjct: 159 EAALSLLDGMRGKGVSPNCFTYNSAIHACARKGKWKLALELIE---RMKADGVT------ 209
Query: 508 APLKPDEYTYSSMLEASATAHQ---------------WEYFEYVYKGMALSGCQLDQTKH 552
P+ TYSS +A A +E E +Y + + + QTK
Sbjct: 210 ----PNLTTYSSAADACAKGGNCVAALKILEEVRSLDFEVGEILYNSVMEACAAVGQTKL 265
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ L+E R + G P P +T + +++++A+ L+ M
Sbjct: 266 SLSLLETMR---------------KDGVKPSPATYTTAITACGRTADWKRALLLLVEM 308
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 24/193 (12%)
Query: 174 NWK-FVRIMNQ----SGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR 228
+WK +R++ Q GL E + G G+ A+S+LD G++ K +
Sbjct: 121 DWKGALRLLGQMREKDGLEPNEFTYTAAVTACGRGGNLEAALSLLD---GMRGKGVSPNC 177
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y + + G+ AL + M D + P++ Y S A + G +K++E
Sbjct: 178 FTYNSAIHACARKGKWKLALELIERMKAD-GVTPNLTTYSSAADACAKGGNCVAALKILE 236
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+R E ++YN+V+ AC Q K + + +RK G+KPS
Sbjct: 237 EVRSLD---------------FEVGEILYNSVMEACAAVGQTKLSLSLLETMRKDGVKPS 281
Query: 349 AATYGLAMESYRR 361
ATY A+ + R
Sbjct: 282 PATYTTAITACGR 294
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 138/378 (36%), Gaps = 100/378 (26%)
Query: 235 LAILGKAGR--PHEALRIFNLMLEDCNLY---PDIAAYHSVAVTLG-------QVGLLKE 282
L + GKAGR P L LE+ Y PD+ +Y+S G GLL E
Sbjct: 441 LTLCGKAGRWDPPRGL------LEEMPSYGIMPDVVSYNSAISACGYRAKWDKAAGLLAE 494
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
L W L+PD Y++ ++AC + +W+ + ++++
Sbjct: 495 L----------------------WLAGLKPDCYSYSSAIHACAGASRWEEAMSLLREMKA 532
Query: 343 SGLKPSAATYGLAMESY-------------------------------RRC--------- 362
GL P+ YG AM + + C
Sbjct: 533 VGLGPNVVAYGAAMSALANGKQWEVALELLDEANLLFCCWCCCLFVWEKVCAHPEDSGIR 592
Query: 363 ----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-CLCNNGRWQDAML 417
L +RA GK + + NM V + V Y A + + G + A
Sbjct: 593 PNAVLYGAAIRACSGAGKWRVGLELLENMHTASGVTPSLVCYNAALHGMASAGEGKRARD 652
Query: 418 VVEKI-KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKV 475
++E + + R ++P ++ I + GG + + ++ + M+ P++ + N +++
Sbjct: 653 LIETMQRGPRITRPDHYSYNSAIAACGPGGEVAEARALLECMRQRGTPPDVFSFNGVMQA 712
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
++ A EL EE S G L PD +++ + A A QW+
Sbjct: 713 NVWGGDWAAALELLEEM---KSEG----------LMPDVTSFNIAVHACAVGCQWQAAMD 759
Query: 536 VYKGMALSGCQLDQTKHA 553
+ MA +G +D +A
Sbjct: 760 LLDEMAEAGLAMDAFTYA 777
>gi|115466680|ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|55773690|dbj|BAD72273.1| putative PPR2 [Oryza sativa Japonica Group]
gi|113594979|dbj|BAF18853.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|215697063|dbj|BAG91057.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197679|gb|EEC80106.1| hypothetical protein OsI_21852 [Oryza sativa Indica Group]
gi|222635046|gb|EEE65178.1| hypothetical protein OsJ_20289 [Oryza sativa Japonica Group]
Length = 511
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 125/284 (44%), Gaps = 40/284 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y KL+ +LGK +P A +F M+++ P++ +Y ++ + G L+E+
Sbjct: 162 IYVKLITMLGKCKQPERAHELFQAMVDE-GCAPNLESYTALVSAYSRSGRFDRAFSLLEQ 220
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ P R PD+ Y+ ++ +C+ ++ ++ V ++ + + ++G++P+
Sbjct: 221 MKATPGCR--------------PDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNV 266
Query: 350 ATYGLAMESYRRC---------LLKVL--------------VRAFWEEGKINEAVAAVRN 386
TY +++Y + LL++L +RAF G+I +
Sbjct: 267 VTYNTLIDAYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIETMESCYEK 326
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
+ G+ Y L ++ V+E ++ +S + +T+ +I + G
Sbjct: 327 FQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTI-VTYNVVIDAFGRAG 385
Query: 447 HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
++ IF+ MK + +PN T+ ++++ Y R K K +
Sbjct: 386 DLEQMEYIFRLMKSERIKPNCVTLCSLVRAYGRAGDVKKIKTVL 429
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
RW A+ V + ++ +P + LI + +FQ M D C PN+ +
Sbjct: 139 RWDSALKVFDLMRDQVWYRPYVGIYVKLITMLGKCKQPERAHELFQAMVDEGCAPNLESY 198
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
A++ YSR+ F +A L E+ +PD TYS ++++ A+
Sbjct: 199 TALVSAYSRSGRFDRAFSLLEQMKATPGC------------RPDVQTYSILIKSCLHAYD 246
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
+E +Y+ + MA +G + + + L+ +AG+ +E +L
Sbjct: 247 FERVKYLMEDMARAGIRPNVVTYNTLIDAYGKAGRFAEMESTLLEML 293
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 157/394 (39%), Gaps = 48/394 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLKELVK 285
+ LL +A R EAL I + PD+ +Y + +L G+ G +L++
Sbjct: 150 IIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 209
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
++ V P++V YN V++ +FK++ + G+
Sbjct: 210 MMAE----------------GGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI 253
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
P TY +V A + +++A A +R M + V+ Y L
Sbjct: 254 PPDLVTY------------NSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYG 301
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSK-PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE- 463
+ G+W++A+ V ++++ RHS P +T + L+ S G I + +F M +
Sbjct: 302 YSSTGQWKEAVRVFKEMR--RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 359
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
P++ + N ML Y+ +LF+ + GDG + PD YT++ +++A
Sbjct: 360 PDVFSYNIMLNGYATKGCLVDMTDLFD-----------LMLGDG--IAPDFYTFNVLIKA 406
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
A + ++ M G + D + ++ R GK F+ +++ G P
Sbjct: 407 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 466
Query: 584 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHI 617
+ ++ + KA LI+ + H+
Sbjct: 467 KYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHL 500
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 165/427 (38%), Gaps = 60/427 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV--YTKLLAILGKAGRPHEALRIFNL 253
LLK L D+G QA +L + + + S V Y ++ K G ++A +F
Sbjct: 191 LLKSLCDQGKSGQADDLLRM---MAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKE 247
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M++ + PD+ Y+SV L + + + K +RQ +KR+ NW
Sbjct: 248 MVQR-GIPPDLVTYNSVVHALCKA---RAMDKAEAFLRQMVNKRVLP---NNW------- 293
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
YN ++ + QWK VFK++R+ + P T L +L+ + +
Sbjct: 294 --TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVT------------LSMLMGSLCK 339
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVY------YELACCLCNNGRWQDAMLVVEKIKSLRH 427
GKI EA M +G Y Y CL + D ML
Sbjct: 340 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG-------DG 392
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 486
P TF LI + + G +D + IF M+DH +P++ T ++ R A
Sbjct: 393 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 452
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
E F + + PD+Y Y+ +++ T + + + +G
Sbjct: 453 EKFNQMIDQG-------------VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 499
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
LD + ++ + G+ ++ FD + G P + + ++ + EKA+ +
Sbjct: 500 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRV 559
Query: 607 INAMAYA 613
+AM A
Sbjct: 560 FDAMVSA 566
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 164/409 (40%), Gaps = 71/409 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K + G +AM + + + K D+ + Y ++A L + G+ +A+ FN M+
Sbjct: 403 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVT---YRTVIAALCRIGKMDDAMEKFNQMI 459
Query: 256 EDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLI------------ERMRQKPSKRIKN 300
D + PD AY+ + T G + KEL+ I + K +
Sbjct: 460 -DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 518
Query: 301 MHRKNW-----DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
M +N + L PD VVYN +++ + + VF + +G++P+ YG
Sbjct: 519 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYG-- 576
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
LV + + G+I+E ++ R M QRG+ + +Y + L GR A
Sbjct: 577 ----------TLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPA 626
Query: 416 MLVVEKIKSLRHSK-PLEITFTGLIISSMDGGH-IDDCISIFQHMKD-HCEPNIGTVNAM 472
+ K + S ++I +++ + D+ I +F+ ++ + + NI T+N M
Sbjct: 627 KM---KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTM 683
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
+ + +AK+LF +R+ L P TYS M+ E
Sbjct: 684 IDGMFQTRRVEEAKDLFASISRSR-------------LVPSVVTYSIMITNLIKEGLVEE 730
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
E ++ M +GC+ + LL H LL+ EI
Sbjct: 731 AEDMFSSMQNAGCEPNS----------------RLLNHVVRELLKKNEI 763
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 108/286 (37%), Gaps = 28/286 (9%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLV 368
VL P Y +++ C +H+ + F QL ++GL+ + + L+
Sbjct: 109 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNII------------IANHLL 156
Query: 369 RAFWEEGKINEAV-AAVRNMEQRGVVGTASVYYELACCLCNNGR-WQDAMLVVEKIKSLR 426
F E + +EA+ + + G V Y L LC+ G+ Q L+ +
Sbjct: 157 EGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGA 216
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
P + + +I G ++ +F+ M + P++ T N+++ + KA
Sbjct: 217 VCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKA 276
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+ + + P+ +TY++++ ++ QW+ V+K M
Sbjct: 277 EAFLRQMVNKR-------------VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 323
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
D + L+ + GK FD++ G+ P + ML
Sbjct: 324 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 369
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 103/492 (20%), Positives = 188/492 (38%), Gaps = 94/492 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL KG +A + V G++ + S F Y L+ L G +A + L +
Sbjct: 280 VITGLARKGDLEEAA---EMVEGMRLSKK-ASSFTYNPLITGLLAKGFVKKADDL-QLEM 334
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKEL-VKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E+ + P + Y+++ L Q G ++ VK +E MR L+PD+
Sbjct: 335 ENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE-MRAMG---------------LQPDV 378
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+ YN++LN + K +F LR +GL P+ TY + ++ Y R
Sbjct: 379 ITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRL------------ 426
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYEL------ACCLCNNGRWQDAML----------- 417
G + EA M ++G + Y L AC L + D ML
Sbjct: 427 GDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAY 486
Query: 418 -----------VVEKIKSLRHSKPLE------ITFTGLIISSMDGGHIDDCISI-FQHMK 459
+ K LR LE +T+ LI G+++D + + +
Sbjct: 487 NTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVH 546
Query: 460 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
+ +P+ T ++ + + +A++ F++ + DG L P TY+
Sbjct: 547 NGLQPDCITYTCLIHAHCERGLLREARKFFKD-----------MISDG--LAPSAVTYTV 593
Query: 520 MLEASA------TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
+ A +A+ W ++ M G + ++ + L+ R G+ L F
Sbjct: 594 FIHAYCRRGNLYSAYGW------FRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFH 647
Query: 574 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRI 633
+LE G +P+ +T ++ + N+E A+ M H LF+ ++
Sbjct: 648 EMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDEGH 707
Query: 634 SRDKLEKLLNAL 645
+E L NA+
Sbjct: 708 MNHAIEYLENAV 719
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 113/298 (37%), Gaps = 39/298 (13%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ PD+ N VL + +W + V ++ + G++PS TY L+
Sbjct: 198 VAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTY------------NTLLD 245
Query: 370 AFWEEGKINEAVAAVRNMEQR--GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
+F +EG+ ++ ++ ME R G + + + L G ++A +VE ++ +
Sbjct: 246 SFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK- 304
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 486
K T+ LI + G + + M++ P + T NAM+ ++ A+
Sbjct: 305 -KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQ 363
Query: 487 ELFEE-----------TTRANSSGYT---------FLSGD--GAPLKPDEYTYSSMLEAS 524
F E T + +GY L GD A L P TY+ +++
Sbjct: 364 VKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGY 423
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
E + + M GC D + L+ + A + FD +L G P
Sbjct: 424 CRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQP 481
>gi|357498031|ref|XP_003619304.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494319|gb|AES75522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 805
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 133/318 (41%), Gaps = 46/318 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYG-----------------LKDKRDLKSRFVYTKLLAI- 237
L+ GL G R A+ VL + G KDK + + +Y++++
Sbjct: 302 LINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSEMIVKR 361
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
+ +A +F+ M+ N+ P++ ++ + L + G +KE +I +M +
Sbjct: 362 IPPTVVTFKAFSLFHEMVLK-NINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNL 420
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
MH K P+ V YN +++ S + + + Q+R G P+ TY
Sbjct: 421 FTEMHCK-------PNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYN---- 469
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
L+ A + +++A+A V N + +G+ Y L LC GR +DA L
Sbjct: 470 --------SLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQL 521
Query: 418 VVEKIKSLRHSKP---LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 473
+ + + ++ P I GL + G +D+ ++ M+D+ C P++ T ++
Sbjct: 522 IFQDLLIKGYNLPTWTYNIMINGLCLE----GLLDEAETLLSKMEDNGCIPDVVTYQTII 577
Query: 474 KVYSRNDMFSKAKELFEE 491
D KA++L E
Sbjct: 578 HALFEKDENDKAEKLVRE 595
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 51/305 (16%), Positives = 113/305 (37%), Gaps = 35/305 (11%)
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V Y ++N Q + V +Q+ + + Y ++ + L + + E
Sbjct: 297 VTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSE 356
Query: 375 GKIN---------EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK-- 423
+ +A + M + + + L LC +G+ ++A V+ K+
Sbjct: 357 MIVKRIPPTVVTFKAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDE 416
Query: 424 -----SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYS 477
+ H KP +++ LI G + + M+D +P N+ T N++L
Sbjct: 417 ALNLFTEMHCKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALC 476
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+N KA L G ++PD +TY+++++ + + + ++
Sbjct: 477 KNHHVDKAIALVNN-----------FKDQG--IQPDMHTYNTLVDGLCKQGRLKDAQLIF 523
Query: 538 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 597
+ + + G L + ++ G E + + G IP + + Q I+
Sbjct: 524 QDLLIKGYNLPTWTYNIMINGLCLEGLLDEAETLLSKMEDNGCIPDVVTY-----QTIIH 578
Query: 598 SNYEK 602
+ +EK
Sbjct: 579 ALFEK 583
>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 128/328 (39%), Gaps = 47/328 (14%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+ +N L+ ++ F + + G +P +Y +L+
Sbjct: 112 PDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSY------------TILINGL 159
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKP 430
+ GK+ +AV M + GV L LC+ + A +V E+IKS R K
Sbjct: 160 FRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSAR-VKL 218
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+ + LI G I+ ++ +M K CEP++ T N +L Y N+M +A+ +
Sbjct: 219 STVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVM 278
Query: 490 EETTRAN---------------------SSGYTFLSGDGAPLK-PDEYTYSSMLE----A 523
E R+ Y F+ + P D +YS+++E A
Sbjct: 279 AEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRA 338
Query: 524 SATAHQWEYFEYV-YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
S T + FE + KGM ++ A+L R G + + D + E G P
Sbjct: 339 SNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFL-----REGNSSVAKKLLDQMTELGLSP 393
Query: 583 HPLFFTEMLIQAIVQSNYEKAVALINAM 610
+F+T +L N +KA + N M
Sbjct: 394 DRIFYTTILDHLCKSGNVDKAYGVFNDM 421
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 131/336 (38%), Gaps = 60/336 (17%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG---QVGLLKELV-KL 286
YT L+ L +AG+ +A+ I+N M+ + PD A ++ V L +V L E+V +
Sbjct: 152 YTILINGLFRAGKVTDAVEIWNAMIRS-GVSPDNKACAALVVGLCHARKVDLAYEMVAEE 210
Query: 287 IERMRQKPSKRIKNMHRKNWDPV-----------------LEPDLVVYNAVLNACVPSHQ 329
I+ R K S + N + EPDLV YN +LN ++
Sbjct: 211 IKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNM 270
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRR------CL-----------------LKV 366
K V ++ +SG++ A +Y ++ + R C
Sbjct: 271 LKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYST 330
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L+ F +A M Q+G+V Y L G A +++++ L
Sbjct: 331 LIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG 390
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 485
S P I +T ++ G++D +F M +H P+ + N+++ R+ ++A
Sbjct: 391 LS-PDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEA 449
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
+LFE+ G PDE T+ ++
Sbjct: 450 IKLFEDMK-------------GKECCPDELTFKFII 472
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 80/198 (40%), Gaps = 19/198 (9%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E R + + L++ T K ++ M Q G++ L+K +G+
Sbjct: 318 EPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSS 377
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
A +LD + L D R YT +L L K+G +A +FN M+E + PD +Y
Sbjct: 378 VAKKLLDQMTELGLSPD---RIFYTTILDHLCKSGNVDKAYGVFNDMIEH-EITPDAISY 433
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+S+ L + G + E +KL E M+ K PD + + ++ +
Sbjct: 434 NSLISGLCRSGRVTEAIKLFEDMKGKECC---------------PDELTFKFIIGGLIRG 478
Query: 328 HQWKGVFWVFKQLRKSGL 345
+ + V+ Q+ G
Sbjct: 479 KKLSAAYKVWDQMMDKGF 496
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 119/300 (39%), Gaps = 47/300 (15%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPH--EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
+K R S VY L++ KAGR EAL+ + + PD+ Y+ V L
Sbjct: 211 IKSARVKLSTVVYNALISGFCKAGRIEKAEALKSY---MSKIGCEPDLVTYN---VLLNY 264
Query: 277 V----------GLLKELVK------------LIER-MRQKPSKRIKNMHRKNWDPVLEPD 313
G++ E+V+ L++R R + N K +P D
Sbjct: 265 YYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCD 324
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
+V Y+ ++ + + + +F+++R+ G+ + TY L++AF
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTY------------TSLIKAFLR 372
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLE 432
EG + A + M + G+ Y + LC +G A V + + H P
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDM--IEHEITPDA 430
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
I++ LI G + + I +F+ MK C P+ T ++ R S A +++++
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQ 490
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/436 (20%), Positives = 174/436 (39%), Gaps = 54/436 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G W++ + +L+ + K D + Y LL L H L +LM+
Sbjct: 248 LIHGYLSIGKWKEVVQMLEKMSARGLKPDC---YTYGSLLNYLCALSEMHSFL---DLMV 301
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPS--------------KRI 298
E+ L PD ++ + G++ + + + +MRQ P+ R+
Sbjct: 302 EN-GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRV 360
Query: 299 KNMHRKNWDPVLE---PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ K + E P++VV+N+++ +W+ + ++ G+ P+A +
Sbjct: 361 DDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFF--- 417
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+ G++ E + ME GV A Y L C GR +A
Sbjct: 418 ---------NTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEA 468
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 474
V + + S+ S P E+T+ L+ IDD +F+ M + P + T N +L
Sbjct: 469 EKVFDGMVSIGLS-PTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILH 527
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
+ FS+AKEL+ + + K D YTY+ +L ++ +
Sbjct: 528 GLFQTKRFSEAKELYLNMINSGT-------------KCDIYTYNIILNGLCKSNCVDEAF 574
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 594
+++ + G QL+ ++ + G+ F ++ G +P+ + + +
Sbjct: 575 KMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENL 634
Query: 595 IVQSNYEKAVALINAM 610
I + + E+ +L +AM
Sbjct: 635 IEEGSLEEFDSLFSAM 650
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 114/538 (21%), Positives = 192/538 (35%), Gaps = 114/538 (21%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
+LLKGL D +AM VL + + + Y+ LL R EAL + +M
Sbjct: 138 QLLKGLCDGKRVGEAMDVL--LQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMM 195
Query: 255 LED----CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL 310
D C P++ Y +V GL K +L +R + I N + N D
Sbjct: 196 ANDHGRSCP--PNVVTYTTVID-----GLCK--AQLFDRAEGVFQQMIDNGVKPNND--- 243
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG-----LAMESYRRCLLK 365
YN +++ + +WK V + +++ GLKP TYG L S L
Sbjct: 244 -----TYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLD 298
Query: 366 VLVR---------------AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
++V A+ + G I++A+ M Q G+ Y L LC G
Sbjct: 299 LMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLG 358
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVN 470
R DA E+ F Q + + PNI N
Sbjct: 359 RVDDA----------------EVKFN-------------------QMINEGVTPNIVVFN 383
Query: 471 AMLKVYSRNDMFSKAKEL-FEETTRANSSGYTFLSG---------------------DGA 508
+++ D + +A+EL +E + F + +
Sbjct: 384 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV 443
Query: 509 PLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL---VEASRAGKC 565
++PD ++Y+ ++ A + + E V+ GM G + + LL ASR
Sbjct: 444 GVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 503
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA----VALINAMAYAPFHITERQ 621
+ L F +L G P + + +L + +A + +IN+ +
Sbjct: 504 YCL---FREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNII 560
Query: 622 WTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSS 679
L +SN D+ K+ +LC+ + IT + + AL R E DL ++
Sbjct: 561 LNGLCKSN----CVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAA 614
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 113/542 (20%), Positives = 194/542 (35%), Gaps = 117/542 (21%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LLKG ++ +A+ +L + + + YT ++ L KA A +F M+
Sbjct: 175 LLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMI 234
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ + P+ Y+ + +G KE+V+++E+M + L+PD
Sbjct: 235 DN-GVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARG---------------LKPDCY 278
Query: 316 VYNAVLN-ACV-----------------PSHQWKGVFW--------------VFKQLRKS 343
Y ++LN C P H +F+ +F ++R+
Sbjct: 279 TYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQH 338
Query: 344 GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
GL P+ YG L+ A + G++++A M GV V+ L
Sbjct: 339 GLSPNVVNYG------------ALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLV 386
Query: 404 CCLCNNGRWQDA------ML-----------------------VVEK---IKSLRH--SK 429
LC +W+ A ML V+E I + H +
Sbjct: 387 YGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVR 446
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P ++T LI G D+ +F M P T N +L Y A L
Sbjct: 447 PDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCL 506
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F E R + P TY+++L ++ + +Y M SG + D
Sbjct: 507 FREMLRKG-------------VTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCD 553
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV---A 605
+ +L ++ F SL G + + FT M+ + E A+ A
Sbjct: 554 IYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFA 613
Query: 606 LINAMAYAPFHITERQWTE-LFESNEDRISRDKLEKLLNAL-CNCNAASSEITVSNLSRA 663
I A P +T R E L E S ++ + L +A+ N A +S++ + + R
Sbjct: 614 AIPANGLVPNVVTYRLVAENLIEEG----SLEEFDSLFSAMEKNGTAPNSQMLNALVRRL 669
Query: 664 LH 665
LH
Sbjct: 670 LH 671
>gi|255660986|gb|ACU25662.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 376
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 137/337 (40%), Gaps = 47/337 (13%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
++G A R++ ++E + PD Y+++ +V +K+ +L E M + ++ +
Sbjct: 2 ESGDIDGAERVYKEIVES-KVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+ +N ++ + + V +++ ++KSG + TYG
Sbjct: 61 S----------------FNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYG------ 98
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
+LV F + G I++++ + EQ+G V A Y + LC A+ V+
Sbjct: 99 ------ILVHGFCKNGYIDKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDRAVSVL 152
Query: 420 EK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYS 477
IKS KP + LI + +D I +F+ M HC PNI T N ++
Sbjct: 153 NGMIKS--GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPNIITYNTLINGLC 210
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+N+MF +A L +E L P TYS +++ H+ E ++
Sbjct: 211 KNEMFGEAYNLVKELLDKG-------------LNPGVITYSMLMKGLCLDHKVEKALQLW 257
Query: 538 KGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 573
+ G + D H L+ GK L L FD
Sbjct: 258 NQVTSKGFKPDVQMHNVLIHGLCSVGKMQLALSLYFD 294
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 154/369 (41%), Gaps = 57/369 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L GL G + +S+ + LK K + + + LL L K G+ +A ++F ML
Sbjct: 305 LFDGLTRTGESQTMLSL--FAESLK-KGVMLGAYTCSILLNGLCKDGKVAKAKQVFE-ML 360
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
L P Y+++ QV L+ + E+M+ S+ I+ PD +
Sbjct: 361 VHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMK---SRHIR------------PDHI 405
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY------RRCLLKV--- 366
YNA++N + ++ KSG+ PS T+ +++Y +C +
Sbjct: 406 TYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 465
Query: 367 --------------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
+V+AF + GKI EAVA + +M + V A VY + +G
Sbjct: 466 QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDT 525
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNA 471
+ A+L+VEK+K+ S + +T+ L+ ID+ + +++ P++ + N
Sbjct: 526 EQALLLVEKMKNSGVSASI-VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNT 584
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
++ KA EL +E + ++P T +++ A A+A +
Sbjct: 585 IISACCNKGDTDKALELLQEMNKYG-------------IRPTLRTCHTLVSALASAGRVH 631
Query: 532 YFEYVYKGM 540
E +Y+ M
Sbjct: 632 DMECLYQQM 640
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 74/405 (18%), Positives = 150/405 (37%), Gaps = 87/405 (21%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++A L ++G+ +AL++F+ M+ D + P+ Y+++ + G L+ +L +
Sbjct: 195 FSYNVVIAGLWRSGKGSDALKVFDEMV-DMGVAPNRITYNTMIDGHVKGGDLEAGFRLRD 253
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M K P++V YN +L+ + + + ++ + P
Sbjct: 254 QMLHDGPK---------------PNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD 298
Query: 349 AATYGLAMESYRRC-----------------------LLKVLVRAFWEEGKINEAVAAVR 385
TY + + R +L+ ++GK+ +A
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFE 358
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
+ G+V T +Y L C + A + E++KS RH +P IT+ LI
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS-RHIRPDHITYNALI------ 411
Query: 446 GHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
N + K+ +M +KA++L E ++
Sbjct: 412 ------------------------NGLCKL----EMVTKAEDLVMEMEKSG--------- 434
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
+ P T++++++A TA Q E V M G + D ++ + GK
Sbjct: 435 ----VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 490
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
D ++ P+ + ++ I + E+A+ L+ M
Sbjct: 491 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKM 535
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 97/472 (20%), Positives = 202/472 (42%), Gaps = 57/472 (12%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVR-IMNQSGLMFTEGQMLKLLKGLGDKGSW 206
+K WR E ++ L D + + K+ +FV ++ + + T ++K +G + +W
Sbjct: 144 DKNWR---ERVKYLTDTI----LALKSEEFVAGVLEERRVQMTPTDFCFVVKWVGQQ-NW 195
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
++A+ + + + L+ +R V T +L +LGKA + A+ IF + ++ +
Sbjct: 196 QRALELYECL-NLRHWYAPNARMVAT-ILGVLGKANQEALAVEIF--ARAESSVGDTVQV 251
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
Y+++ + G ++ +L++ MR++ PDLV +N ++NA +
Sbjct: 252 YNAMMGVYARNGRFSKVKELLDLMRERGCV---------------PDLVSFNTLINARMK 296
Query: 327 SHQWKG--VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAV 384
S + + ++R+SG++P TY L+ A E + EAVA
Sbjct: 297 SGAMEPNLALQLLNEVRRSGIRPDIITYN------------TLISACSRESNLEEAVAVF 344
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
+ME Y + R + A + ++++S + P +T+ L+ +
Sbjct: 345 SDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELES-KGFFPDAVTYNSLLYAFSR 403
Query: 445 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
G+ + I + M K + T N ++ +Y + +A +++ + SSG
Sbjct: 404 EGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDM---KSSGRN-- 458
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
PD TY+ ++++ A + E V M +G + ++ L+ ++AG
Sbjct: 459 --------PDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAG 510
Query: 564 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPF 615
K E F+ + +G P L ++ ML + + +KA+ L + M F
Sbjct: 511 KREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGF 562
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 95/450 (21%), Positives = 166/450 (36%), Gaps = 103/450 (22%)
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL------------ 310
DI+ Y + T G++ + ++ L+ +RQ+ SK M RK W+ ++
Sbjct: 773 DISVYIDIVETYGKLKIWQKAESLVGSLRQRCSK----MDRKVWNALIHAYAFSGCYERA 828
Query: 311 ------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
P + N +L A + + ++ V ++L+ GLK S ++ L +E
Sbjct: 829 RAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLE- 887
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA--- 415
AF + G + E M+ G T VY + LC R +D
Sbjct: 888 -----------AFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETM 936
Query: 416 ----------------------MLVVEKIKSL---------RHSKPLEITFTGLIISSMD 444
L +E KS+ KP E T+ LII
Sbjct: 937 LCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCR 996
Query: 445 GGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF- 502
++ S+ M+ EP + T +++ +++ M+ +A+ELFEE S+GY
Sbjct: 997 DRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEEL---RSNGYKLD 1053
Query: 503 ------------LSGDG------------APLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
SGD + ++P T ++ + + Q E E V K
Sbjct: 1054 RAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLK 1113
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
+ +G LD ++ ++ + G + EAG P +T + A +
Sbjct: 1114 NLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSE 1173
Query: 599 NYEKAVALINAMAYAPFHITERQWTELFES 628
+A+ L+NA+ A F + R E ES
Sbjct: 1174 GTNEAIVLLNALQDAGFDLPIRLLKEKSES 1203
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 122/282 (43%), Gaps = 17/282 (6%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
++ + G+ ++ + M +RG V + L +G + L ++ + +R
Sbjct: 255 MMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPN-LALQLLNEVR 313
Query: 427 HS--KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 483
S +P IT+ LI + ++++ +++F M+ H C+P++ T NAM+ VY R
Sbjct: 314 RSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARAR 373
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
KA+ELF+E S G+ PD TY+S+L A + E + + M
Sbjct: 374 KAEELFKEL---ESKGFF----------PDAVTYNSLLYAFSREGNTEKVRDICEEMVKR 420
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
G D+ + ++ + G+ + + +G P + +T ++ S E+A
Sbjct: 421 GFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEA 480
Query: 604 VALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL 645
+++ M A T ++ L + R++ E+ N +
Sbjct: 481 ANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCM 522
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 152/375 (40%), Gaps = 44/375 (11%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+ +L ++ RPH+ALR+F+ M L PD A ++ L + RM
Sbjct: 120 LVLVLAQSARPHDALRVFDQMRAR-GLAPDAHACTALLTALARA-----------RMTAT 167
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ M R L VYNA+L+ C+ + + ++ +G+ +Y
Sbjct: 168 ARRVFDEMARAG----LAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSY- 222
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
++ + ++G EA+ M++ G+ + L LC GR +
Sbjct: 223 -----------NTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVK 271
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAM 472
+A + ++ + + + P +T+T LI G+I++ + + M+ P + T NA+
Sbjct: 272 EAAQLFTEMAAAQ-ATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAI 330
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
L+ + + +L E D ++ D T ++++ A
Sbjct: 331 LRKLCEDGKMKEVNQLLNEM-------------DERKVQADHVTCNTLINAYCKRGHMTS 377
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 592
V K M SG QL+Q + L+ +A + + AF +++AG P+ F+ L+
Sbjct: 378 ACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFS-WLV 436
Query: 593 QAIVQSNYEKAVALI 607
+ N AV LI
Sbjct: 437 DGFCKKNNADAVLLI 451
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 115/311 (36%), Gaps = 40/311 (12%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTE---GQMLKLLKGLGDKGSWRQAM 210
+A A L+ L+ MTA + M ++GL + ML + GD +
Sbjct: 148 DAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNAMLHVCLKAGDAARAEALV 207
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSV 270
+ +D D RF Y ++A+ K G +EA+ + + M ++ + D ++S+
Sbjct: 208 TRMDAAGVPLD------RFSYNTVIALYCKKGMRYEAMCVRDRMDKE-GIRADTVTWNSL 260
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
L + G +KE +L M + PD V Y +++ +
Sbjct: 261 IHGLCKYGRVKEAAQLFTEMAAAQA---------------TPDNVTYTTLIDGYCRAGNI 305
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR 390
+ + ++ +G+ P ATY ++R E+GK+ E + M++R
Sbjct: 306 EEAVKLRGEMEATGMLPGVATY------------NAILRKLCEDGKMKEVNQLLNEMDER 353
Query: 391 GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMDGGHID 449
V L C G A V K K + L + T+ LI +D
Sbjct: 354 KVQADHVTCNTLINAYCKRGHMTSACKV--KKKMMESGLQLNQFTYKALIHGFCKAKELD 411
Query: 450 DCISIFQHMKD 460
+ F M D
Sbjct: 412 EAKEAFFQMVD 422
>gi|356528509|ref|XP_003532845.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 580
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 132/300 (44%), Gaps = 33/300 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L + LG +W Q + V W+ K + + +Y+KL++++GK G+ A+ +F+ M
Sbjct: 142 LFEELGKHDNWLQCLEVFRWMQ--KQRWYIADNGIYSKLISVMGKKGQTRMAMWLFSEM- 198
Query: 256 EDCNLYPDIAAYHS-VAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ PD + Y++ + L +K L K I +++K M R +P++
Sbjct: 199 RNTGCRPDTSVYNALITAHLRSRDKIKALAKAIGYF-----QKMKGMER------CKPNI 247
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V YN +L A + + V +FK L +S + P T+ M++Y +
Sbjct: 248 VTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGK------------N 295
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLE 432
G I E A + M+ + L + + G+ Q + + KSL HSK P
Sbjct: 296 GMIREMEAVLARMKSNQCKPDLITFNLL---IDSYGKKQAFGKMEQVFKSLLHSKERPSL 352
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKELFEE 491
TF +I++ D +F+ M D + T +M+ +Y D S+A +LF+E
Sbjct: 353 PTFNSMILNYGKARLKDKAEDVFKKMTDMGYTLSFVTHESMIYMYGFCDCVSRAAQLFDE 412
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 26/222 (11%)
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG-- 445
+QR + +Y +L + G+ + AM + ++++ +P + LI + +
Sbjct: 164 KQRWYIADNGIYSKLISVMGKKGQTRMAMWLFSEMRNT-GCRPDTSVYNALITAHLRSRD 222
Query: 446 --GHIDDCISIFQHMK--DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
+ I FQ MK + C+PNI T N +L+ +++ + LF++
Sbjct: 223 KIKALAKAIGYFQKMKGMERCKPNIVTYNILLRAFAQARNVEQVNSLFKDL--------- 273
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
D + + PD YT++ +++A E V M + C+ D L+ +
Sbjct: 274 ----DESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARMKSNQCKPDLITFNLLIDSYGK 329
Query: 562 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
+E F SLL + E P F M++ NY KA
Sbjct: 330 KQAFGKMEQVFKSLLHSKERPSLPTFNSMIL------NYGKA 365
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/438 (21%), Positives = 170/438 (38%), Gaps = 75/438 (17%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M +GL+ L+ G G ++A V+D + L + Y L+ L K
Sbjct: 273 MKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDL---MAQNNVLPDVWTYNMLIGGLCK 329
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK---- 296
G+ EA R+ + M E+ L PD+ Y+++ + +LI++M K K
Sbjct: 330 DGKIDEAFRLKDEM-ENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAV 388
Query: 297 ----------------RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
N RK + PD V +N ++N + + F + ++
Sbjct: 389 TYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEM 448
Query: 341 RKSGLKPSAAT-----------------YGLAMESYRRCLL------KVLVRAFWEEGKI 377
+ GLK ++ T Y L + +R L+ ++++GK
Sbjct: 449 SRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKS 508
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEITF 435
EA+ M+++ ++ + Y + LC++G+ + ++K+ L S P E T+
Sbjct: 509 VEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQS---IDKLNELLESGLVPDETTY 565
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE---- 490
+I+ G ++ M K +P++ T N +L+ M KA +LF
Sbjct: 566 NTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWIS 625
Query: 491 ETTRANSSGY-TFLSG-----------------DGAPLKPDEYTYSSMLEASATAHQWEY 532
+ ++ Y T +SG + L PD YTY+++L A A A + +
Sbjct: 626 KGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKE 685
Query: 533 FEYVYKGMALSGCQLDQT 550
E + G DQT
Sbjct: 686 AEEFMSRIVEQGKLQDQT 703
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L L KG +A D + +K+ L +R + L++ K G EA ++ +LM
Sbjct: 253 ILDVLCKKGKLNEAR---DLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMA 309
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ N+ PD+ Y+ + L + G + E +L + M +N+ L PD+V
Sbjct: 310 QN-NVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEM--------ENLK-------LLPDVV 353
Query: 316 VYNAVLNACVP-SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
YN ++N C S KG F + ++ G+KP+A TY V+V+ + +E
Sbjct: 354 TYNTLINGCFDCSSSLKG-FELIDKMEGKGVKPNAVTYN------------VVVKWYVKE 400
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
GK++ A +R ME+ G + L C GR +A +++++
Sbjct: 401 GKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEM 448
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 170/409 (41%), Gaps = 78/409 (19%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L KAG A+++ ++ + P++ Y ++ +L + L+ + L +M
Sbjct: 87 YGTLIDGLCKAGETRAAMQVLR-NIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQM 145
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K RI PD++ YN ++ C+ + K +F Q+ +KP
Sbjct: 146 LLK---RI------------SPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIY 190
Query: 351 TYGLAMESY--------RRCLLKVLVR---------------AFWEEGKINEAVAAVRNM 387
T+ + ++ R +L V+++ ++ + N+A M
Sbjct: 191 TFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTM 250
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+RGV Y + LC +A+ +++++ S + P +T++ LI G
Sbjct: 251 ARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHS-KSMAPNTVTYSSLIDGLHKSGR 309
Query: 448 IDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
I D + M + +P ++ T N++L +N KA L T+ G
Sbjct: 310 IFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLL---TKIKDQG------- 359
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
++PD YTY+ +++ + + + VY+ + + G LD
Sbjct: 360 ---IQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDS----------------- 399
Query: 567 LLEHAFDSLL----EAGEIPHPLFFTEMLIQAIVQSNY-EKAVALINAM 610
L + A SLL + G P+P+ F E+LI+A+ +++ +KAV L+ M
Sbjct: 400 LFDKAL-SLLSKMEDNGCTPNPVTF-EILIRALFENDMNDKAVELLREM 446
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 166/427 (38%), Gaps = 60/427 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV--YTKLLAILGKAGRPHEALRIFNL 253
LLK L D+G QA +L + + + S V Y ++ K G ++A +F
Sbjct: 188 LLKSLCDQGKSGQADDLLRM---MAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKE 244
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M++ + PD+ Y+SV L + + + K +RQ +KR+ NW
Sbjct: 245 MVQR-GIPPDLVTYNSVVHALCKA---RAMDKAEAFLRQMVNKRVLP---NNW------- 290
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
YN ++ + QWK VFK++R+ + P T L +L+ + +
Sbjct: 291 --TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVT------------LSMLMGSLCK 336
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVY------YELACCLCNNGRWQDAMLVVEKIKSLRH 427
GKI EA M +G Y Y CL + D ML
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG-------DG 389
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAK 486
P TF LI + + G +D + IF M+DH +P++ T ++ R A
Sbjct: 390 IAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 449
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
E F + + PD+Y Y+ +++ T + + + +G
Sbjct: 450 EKFNQMIDQG-------------VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 496
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
LD + ++ + G+ ++ FD + G P + ++ ++ + EKA+ +
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRV 556
Query: 607 INAMAYA 613
+AM A
Sbjct: 557 FDAMVSA 563
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 157/394 (39%), Gaps = 48/394 (12%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLKELVK 285
+ LL +A R EAL I + PD+ +Y + +L G+ G +L++
Sbjct: 147 IIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLR 206
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
++ V P++V YN V++ +FK++ + G+
Sbjct: 207 MMAE----------------GGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI 250
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
P TY +V A + +++A A +R M + V+ Y L
Sbjct: 251 PPDLVTY------------NSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYG 298
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSK-PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE- 463
+ G+W++A+ V ++++ RHS P +T + L+ S G I + +F M +
Sbjct: 299 YSSTGQWKEAVRVFKEMR--RHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 356
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
P++ + N ML Y+ +LF+ + GDG + PD YT++ +++A
Sbjct: 357 PDVFSYNIMLNGYATKGCLVDMTDLFD-----------LMLGDG--IAPDFYTFNVLIKA 403
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
A + ++ M G + D + ++ R GK F+ +++ G P
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463
Query: 584 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHI 617
+ ++ + KA LI+ + H+
Sbjct: 464 KYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHL 497
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 166/411 (40%), Gaps = 75/411 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K + G +AM + + + K D+ + Y ++A L + G+ +A+ FN M+
Sbjct: 400 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVT---YRTVIAALCRIGKMDDAMEKFNQMI 456
Query: 256 EDCNLYPDIAAYHSVA---VTLGQVGLLKELVKLI------------ERMRQKPSKRIKN 300
D + PD AY+ + T G + KEL+ I + K +
Sbjct: 457 -DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515
Query: 301 MHRKNW-----DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
M +N + L PD VVY+ +++ + + VF + +G++P+ Y
Sbjct: 516 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVY--- 572
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
C LV + + G+I+E ++ R M QRG+ + +Y + +G +Q
Sbjct: 573 ------C---TLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIII-----DGLFQAG 618
Query: 416 MLVVEKIKSLRHSK---PLEITFTGLIISSMDGGH-IDDCISIFQHMKD-HCEPNIGTVN 470
V K+K ++ ++I +++ + D+ I +F+ ++ + + NI T+N
Sbjct: 619 RTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLN 678
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
M+ + +AK+LF +R+ L P TYS M+
Sbjct: 679 TMIDGMFQTRRVEEAKDLFASISRSR-------------LVPSVVTYSIMITNLIKEGLV 725
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
E E ++ M +GC+ + LL H LL+ EI
Sbjct: 726 EEAEDMFSSMQNAGCEPNS----------------RLLNHVVRELLKKNEI 760
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 108/286 (37%), Gaps = 28/286 (9%)
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLV 368
VL P Y +++ C +H+ + F QL ++GL+ + + L+
Sbjct: 106 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNII------------IANHLL 153
Query: 369 RAFWEEGKINEAV-AAVRNMEQRGVVGTASVYYELACCLCNNGR-WQDAMLVVEKIKSLR 426
F E + +EA+ + + G V Y L LC+ G+ Q L+ +
Sbjct: 154 EGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGA 213
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
P + + +I G ++ +F+ M + P++ T N+++ + KA
Sbjct: 214 VCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKA 273
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+ + + P+ +TY++++ ++ QW+ V+K M
Sbjct: 274 EAFLRQMVNKR-------------VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 320
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
D + L+ + GK FD++ G+ P + ML
Sbjct: 321 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIML 366
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 135/332 (40%), Gaps = 46/332 (13%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR----- 361
D + P++ YNA+++ + ++ +FK++ GL+P+ TY + + + +
Sbjct: 331 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 390
Query: 362 ---CL--------LKV-------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
CL +KV L+ + ++G ++ A + M + G+ TA+ Y L
Sbjct: 391 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HC 462
LC NG AM + ++ R TFT LI +D+ +F M D +
Sbjct: 451 AGLCRNGDLSSAMELHREMAE-RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509
Query: 463 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
PN T N M++ Y KA +L+++ LKPD YTY S++
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG-------------LKPDNYTYRSLIS 556
Query: 523 A----SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 578
S + E+ + A+ L+ LL R G+ H +D +
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAV----LNNFSLTALLYGLFREGRFTETYHLWDEMAVR 612
Query: 579 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
G + FT ++ A+ Q + EK+ L M
Sbjct: 613 GVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 75/389 (19%), Positives = 141/389 (36%), Gaps = 30/389 (7%)
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
S +T+ Q + L L+ ++RQ R ++ K + D VY A + A S
Sbjct: 156 SSGITVNQYTASQILFSLV-KIRQFALAR--DLFDKMLQSGVHLDEYVYTAGIRAYCESR 212
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
G + ++ G+K SA Y VL+ + ++ EAV M
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPY------------NVLMYGLCKNMRVQEAVEVKNVMV 260
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
GV Y L C + A+ + + L P E + +I +
Sbjct: 261 NIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFV-PSEANCSFMIDELRKKELV 319
Query: 449 DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
++ S+ + D PN+ NA++ +N+ F A LF+E ++G G
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKE-----------MAGRG 368
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
L+P+E TY+ ++ A E ++ M G ++ + L+ + G
Sbjct: 369 --LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDR 426
Query: 568 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 627
+++ G P ++ ++ + A+ L MA +T L
Sbjct: 427 ARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALIN 486
Query: 628 SNEDRISRDKLEKLLNALCNCNAASSEIT 656
D+ +L + + + N +E+T
Sbjct: 487 GFCKDKKMDEAARLFDKMIDSNVIPNEVT 515
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 100/504 (19%), Positives = 185/504 (36%), Gaps = 71/504 (14%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
A L+D+L + E + + M GL E L+ L +G A+ + D
Sbjct: 340 AYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD-- 397
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
++DK + + Y L+ K G A + + M+++ L P A+Y + L +
Sbjct: 398 -KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE-GLTPTAASYSPLIAGLCR 455
Query: 277 VGLLKELVKLIERM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVV 316
G L ++L M + K + K D + P+ V
Sbjct: 456 NGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-----GLAMES------------- 358
+N ++ + F ++ Q+ + GLKP TY GL + S
Sbjct: 516 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575
Query: 359 -----YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV-VGTASVYYELACCLCNNGRW 412
L L+ + EG+ E M RGV + S + L + +
Sbjct: 576 NSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 635
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 471
+ +L E + + KP +I +T +I + ++ ++ + M D PN T
Sbjct: 636 KSCVLFREMKE--QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTV 693
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
++ ++ A+ L +E N + P+++TY+ L+ AT E
Sbjct: 694 LINNLCKSGYLGSAELLCKEMLAGN-------------VLPNKFTYNCFLDYFATEGDME 740
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD---SLLEAGEIPHPLFFT 588
+ ++ M L G L+ +AGK ++ A D + E+G P + ++
Sbjct: 741 KAKDLHSAM-LQGHLASIVSFNILIKGLCKAGK---IQEAIDLMRKITESGFSPDCISYS 796
Query: 589 EMLIQAIVQSNYEKAVALINAMAY 612
++ + + KA L N M Y
Sbjct: 797 TIIHELCKMGDINKAFELWNEMLY 820
>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 182/449 (40%), Gaps = 63/449 (14%)
Query: 192 QMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
Q +LL L R+A+ V++ + G D S YT L++ L + G A+++
Sbjct: 99 QATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAAS---YTFLVSSLCRKGNVGYAMQLV 155
Query: 252 NLMLEDCNLYP-DIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PS------------ 295
+ M E YP + A Y+S+ L G L + ++L++R+ QK P+
Sbjct: 156 DKMEEYG--YPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAY 213
Query: 296 -KRIKNMHRKNWDPVL----EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+R + K D ++ +P+LV YN +L + + +F++L G P+
Sbjct: 214 KERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVV 273
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+Y +L+R+ EG+ EA + M+ + Y L L +G
Sbjct: 274 SY------------NILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHG 321
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTV 469
R + A+ V+E++ R KP ++ +I +D + Q M HC PN GT
Sbjct: 322 RTEHALEVLEEMIRARF-KPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTY 380
Query: 470 NAMLKVYSRN---DMFSKAKELFEETTRANSSGYTFL------SGDGAP----------- 509
NA+ + + FS + L + + Y + G+ P
Sbjct: 381 NAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKY 440
Query: 510 -LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
PD +TYSS++ ++ M +LD + L++ ++ + L
Sbjct: 441 GFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVME-ENIKLDTENYNSLILGCCKSRRTDLA 499
Query: 569 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 597
F+ ++ G + + +T +L++ I+
Sbjct: 500 LDVFEIMVGKGYLANETTYT-ILVEGIIH 527
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 155/406 (38%), Gaps = 66/406 (16%)
Query: 230 VYTKLLAI--LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
VYT + + L K G+ E + F +++ +YPDI Y+++ GL++E +L+
Sbjct: 235 VYTLNIMVNALCKDGK-MEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
M P K P + YN V+N +++ VF ++ +SGL P
Sbjct: 294 NAM---PGKG------------FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 348 SAATY-GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
+ TY L ME+ ++ G + E +M R VV + +
Sbjct: 339 DSTTYRSLLMEACKK-------------GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPN 465
+G A++ +K P + +T LI G I +++ M + C +
Sbjct: 386 TRSGNLDKALMYFNSVKE-AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ T N +L + M +A +LF E T L PD YT + +++
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTE-------------RALFPDSYTLTILIDGHC 491
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+ +++ M +LD + LL + G + + ++ +P P+
Sbjct: 492 KLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPI 551
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITE--RQWTELFESN 629
++ L+NA+ + H+ E R W E+ N
Sbjct: 552 SYS----------------ILVNALC-SKGHLAEAFRVWDEMISKN 580
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/443 (18%), Positives = 156/443 (35%), Gaps = 101/443 (22%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ KG +A +++ + G K + Y ++ L K G+ A +F ML
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPG---KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
L PD Y S+ + + G + E K+ MR + D V PDLV
Sbjct: 333 RS-GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR-------------DVV--PDLV 376
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-------------- 361
++++++ S F ++++GL P Y + ++ Y R
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 362 ----CLLKV-----LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
C + V ++ + + EA M +R + + L C G
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496
Query: 413 QDAMLVVEKIKSLR----------------------------------HSKPLEITFTGL 438
Q+AM + +K+K R P I+++ L
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 439 IISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE------- 490
+ + GH+ + ++ M + +P + N+M+K Y R+ S + E
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 491 --ETTRANSSGYTFLSGDG---------------APLKPDEYTYSSMLEASATAHQWEYF 533
+ N+ Y F+ + L PD +TY+S+L +Q +
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Query: 534 EYVYKGMALSGCQLDQTKHAWLL 556
E V + M G D++ + ++
Sbjct: 677 EVVLRKMIERGVNPDRSTYTCMI 699
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 79/206 (38%), Gaps = 16/206 (7%)
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
P+I T N ++ YS + +A EL G P YTY++++
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMP-------------GKGFSPGVYTYNTVING 314
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
++E + V+ M SG D T + LL+EA + G E F + +P
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 374
Query: 584 PLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLN 643
+ F+ M+ N +KA+ N++ A +T L + + L N
Sbjct: 375 LVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRN 434
Query: 644 ALCNCNAASSEITVSNLSRALHALCR 669
+ A +T + + LH LC+
Sbjct: 435 EMLQQGCAMDVVTYNTI---LHGLCK 457
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 141/360 (39%), Gaps = 48/360 (13%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A SVL + L + D S +T L+ L G+ EAL +F+ M+ + PD+ Y
Sbjct: 128 AFSVLAKILKLGCQPDTAS---FTTLIKGLCLEGQIGEALHLFDKMIWE-GFQPDVVIYA 183
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L + G ++L+ ++M + N +PD+VVY ++++
Sbjct: 184 TLINGLCKTGHTSAAIRLL-----------RSMEKGNC----QPDVVVYGTLIHSLCKDR 228
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
Q F +F ++ G+ P+ T LV A G+ + M
Sbjct: 229 QQTQAFNLFSEMITKGISPNIVT------------CNSLVYALCNLGEWKHVNTLLNEMV 276
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
++ A + LC G A VV+ + +P +T+T LI +
Sbjct: 277 DSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQ-SGVEPDVVTYTALIDGHCLRSEM 335
Query: 449 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
D+ + +F M C PN+ + N ++ Y + + KA LFEE R
Sbjct: 336 DEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQK----------- 384
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
L P+ TY++++ + + +++ M G D + LL + CHL
Sbjct: 385 --LIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCK--NCHL 440
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 120/297 (40%), Gaps = 33/297 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L + G W+ ++L+ + D + + + T ++ L K G +A + ++M
Sbjct: 255 LVYALCNLGEWKHVNTLLNE---MVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ + PD+ Y ++ + E VK+ + M K P++
Sbjct: 312 QS-GVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCA---------------PNVF 355
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN ++N + ++F+++ + L P+ TY L+ G
Sbjct: 356 SYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTY------------NTLIHGLCHVG 403
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
++ +A+A R M G + Y L LC N AM +++ I+ ++I +
Sbjct: 404 RLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQI-Y 462
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
T +I G ++D +F ++ +PN+ T N M + + +A +LF E
Sbjct: 463 TIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFME 519
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 124/322 (38%), Gaps = 38/322 (11%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
+ + A ++ +VD L + M A+ V +M QSG+ L+ G +
Sbjct: 277 DSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMD 336
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A+ V D + K + F Y L+ K R +A+ +F M L P+ Y
Sbjct: 337 EAVKVFDM---MVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQ-KLIPNTVTY 392
Query: 268 HSVAVTLGQVGLLKELVKLIERM---RQKP---SKRI------KNMHRKNWDPVL----- 310
+++ L VG L++ + L M Q P + RI KN H +L
Sbjct: 393 NTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEG 452
Query: 311 ---EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
+PD+ +Y V++ + + + +F L GLKP+ TY ++
Sbjct: 453 SNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTY------------NIM 500
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
+ G ++EA M++ Y + N A+ ++E++ L
Sbjct: 501 THGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEM--LAR 558
Query: 428 SKPLEITFTGLIISSMDGGHID 449
+++ T L++ + +D
Sbjct: 559 GFSCDVSTTTLLVGMLSDDGLD 580
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/365 (16%), Positives = 138/365 (37%), Gaps = 30/365 (8%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P +V + +L + ++ V + +++ G+ + T L VL+ +F
Sbjct: 72 PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYT------------LNVLINSF 119
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
++N A + + + + G + + L LC G+ +A+ + +K+ +P
Sbjct: 120 CHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKM-IWEGFQPD 178
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ + LI GH I + + M K +C+P++ ++ ++ ++A LF
Sbjct: 179 VVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFS 238
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
E S P+ T +S++ A +W++ + M S +
Sbjct: 239 EMITKGIS-------------PNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAI 285
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
++ + G D + ++G P + +T ++ ++S ++AV + + M
Sbjct: 286 SLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMM 345
Query: 611 AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRS 670
+ + L DK L +C + +T + L +H LC
Sbjct: 346 VHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTL---IHGLCHV 402
Query: 671 EKERD 675
+ +D
Sbjct: 403 GRLQD 407
>gi|357127701|ref|XP_003565517.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Brachypodium distachyon]
Length = 579
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 132/317 (41%), Gaps = 45/317 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+ L+ G AGRP E+ RIF+LM + P++ Y+ + +++ ++ R
Sbjct: 135 TFNTLIKGFGIAGRPEESQRIFDLM--TAWVRPNLTTYNILVKAWCDQRRMEQAWAVVGR 192
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ-WKGVFWVFKQLRKSGLKPS 348
MR +EPD+V YN + +A + + W+ V ++ ++ L+ S
Sbjct: 193 MRPA---------------AVEPDVVTYNTLASAYAKNDETWRAEELVVVEMARARLRTS 237
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
T+G+ + Y R EG++ EA+ VR M+ GV V+ L +
Sbjct: 238 ERTWGIIVGGYCR------------EGRLEEALRCVRQMKDAGVGPNVIVFNTLLKGFLD 285
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
A V+ ++ KP +T++ + + GH+ C +F M + EP+
Sbjct: 286 ANDAAAAADVLGLMEQF-GIKPDIVTYSHQLNALSSLGHMARCAKVFDRMLEAGIEPDPQ 344
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
+ + K Y R KA+EL ++ R ++P+ T+++++ +
Sbjct: 345 VYSILAKGYVRAQQPGKAEELLQQMGRLG-------------VRPNVVTFTTVISGWCSV 391
Query: 528 HQWEYFEYVYKGMALSG 544
+ VY M +G
Sbjct: 392 ADMDNATRVYDKMRGAG 408
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 152/385 (39%), Gaps = 42/385 (10%)
Query: 310 LEPDLVVYNAVLNACVPSHQW---KGVFWVFKQLRKSGLKPSAATY-------GLA---- 355
L PD + +NA++NA V + + VFW + G +P+ +T+ G+A
Sbjct: 92 LRPDPIFFNALINAFVEAGRMGEATSVFWKMSR-HHPGCRPTVSTFNTLIKGFGIAGRPE 150
Query: 356 --------MESYRRCLL---KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
M ++ R L +LV+A+ ++ ++ +A A V M V Y LA
Sbjct: 151 ESQRIFDLMTAWVRPNLTTYNILVKAWCDQRRMEQAWAVVGRMRPAAVEPDVVTYNTLAS 210
Query: 405 CLC-NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HC 462
N+ W+ LVV ++ R + E T+ ++ G +++ + + MKD
Sbjct: 211 AYAKNDETWRAEELVVVEMARARL-RTSERTWGIIVGGYCREGRLEEALRCVRQMKDAGV 269
Query: 463 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
PN+ N +LK + L A + + G +KPD TYS L
Sbjct: 270 GPNVIVFNTLLKGF-----------LDANDAAAAADVLGLMEQFG--IKPDIVTYSHQLN 316
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
A ++ V+ M +G + D ++ L RA + E + G P
Sbjct: 317 ALSSLGHMARCAKVFDRMLEAGIEPDPQVYSILAKGYVRAQQPGKAEELLQQMGRLGVRP 376
Query: 583 HPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLL 642
+ + FT ++ ++ + A + + M A R + L ++ K EK+L
Sbjct: 377 NVVTFTTVISGWCSVADMDNATRVYDKMRGAGVRPNLRTFETLIWGYSEQKQPWKAEKVL 436
Query: 643 NALCNCNAASSEITVSNLSRALHAL 667
+ + + T S ++ A A+
Sbjct: 437 QMMKDAGVRPKQSTYSLVADAWKAV 461
>gi|357140802|ref|XP_003571952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Brachypodium distachyon]
Length = 501
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 136/336 (40%), Gaps = 43/336 (12%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y ++ + + G R+ M E+ L +H + T GQ GL + +L+ER
Sbjct: 178 MYNLVMKVFAQCGEVKAMWRLLEEMTEN-GLSISARTFHLLICTCGQAGLRR---RLVER 233
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ S N+ P +NA+L+ + Q+ + WV +++ G P
Sbjct: 234 FIKSSSF--------NYRPFRNS----FNAILHTLLTIEQYSLIEWVHQKMLMEGHSPDV 281
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY + M RA + GK+++ + M + G+ Y L L
Sbjct: 282 LTYNIVM------------RAKYMLGKLDQFHRLLDEMGKNGLTPDLHTYNILLHVLGKG 329
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGT 468
+ A+ ++ + + P + FT LI G+++ C F + MK CEP++
Sbjct: 330 DKPLAALNLLNYMSDV-GCVPSVLHFTNLIDGLSRAGNLEACKYFFDEMMKKGCEPDVVC 388
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
M+ Y +A++LF++ + G P+ YTY++M+
Sbjct: 389 YTVMITGYVAAAELEEAQKLFDD---------MLVRGK----LPNVYTYNTMIRGLCIVG 435
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+++ + K M L GC + + ++ L+ AGK
Sbjct: 436 EFDKACSMLKDMDLRGCTPNFSVYSTLVCRLRNAGK 471
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 28/191 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL +LGK +P AL + N M D P + + ++ L + G L+ +
Sbjct: 318 TYNILLHVLGKGDKPLAALNLLNYM-SDVGCVPSVLHFTNLIDGLSRAGNLEACKYFFDE 376
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +K EPD+V Y ++ V + + + +F + G P+
Sbjct: 377 MMKKGC---------------EPDVVCYTVMITGYVAAAELEEAQKLFDDMLVRGKLPNV 421
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY ++R G+ ++A + +++M+ RG SVY L C L N
Sbjct: 422 YTY------------NTMIRGLCIVGEFDKACSMLKDMDLRGCTPNFSVYSTLVCRLRNA 469
Query: 410 GRWQDAMLVVE 420
G+ +A V++
Sbjct: 470 GKDAEANNVIK 480
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 56/308 (18%), Positives = 121/308 (39%), Gaps = 51/308 (16%)
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM-----ESYRRCLLKVLV-- 368
+YN V+ + K ++ + +++ ++GL SA T+ L + RR L++ +
Sbjct: 178 MYNLVMKVFAQCGEVKAMWRLLEEMTENGLSISARTFHLLICTCGQAGLRRRLVERFIKS 237
Query: 369 -----RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
R F N + + +EQ ++ W +++E
Sbjct: 238 SSFNYRPF--RNSFNAILHTLLTIEQYSLI-----------------EWVHQKMLMEG-- 276
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMF 482
HS P +T+ ++ + G +D + M K+ P++ T N +L V + D
Sbjct: 277 ---HS-PDVLTYNIVMRAKYMLGKLDQFHRLLDEMGKNGLTPDLHTYNILLHVLGKGDKP 332
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
A L ++S G P ++++++ + A E +Y + M
Sbjct: 333 LAALNLL-----------NYMSDVGCV--PSVLHFTNLIDGLSRAGNLEACKYFFDEMMK 379
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEK 602
GC+ D + ++ A + + FD +L G++P+ + M+ + ++K
Sbjct: 380 KGCEPDVVCYTVMITGYVAAAELEEAQKLFDDMLVRGKLPNVYTYNTMIRGLCIVGEFDK 439
Query: 603 AVALINAM 610
A +++ M
Sbjct: 440 ACSMLKDM 447
>gi|357116849|ref|XP_003560189.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Brachypodium distachyon]
Length = 737
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 166/428 (38%), Gaps = 84/428 (19%)
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPD 263
G R A VL+ + L +R + +Y ++ + GR +A IF M E ++ PD
Sbjct: 259 GRARMADEVLEILGRLPHERQFREAVLYNAAMSGVAYCGRYDDAWTIFEFM-EKNSVQPD 317
Query: 264 -IAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK--------RIK--------------- 299
I + + V Q K + +RM +K K IK
Sbjct: 318 HITSSIMLNVMKKQKVSAKAAWEFFQRMNRKGVKWSLDVSASLIKMFCDEGLKKEALIIQ 377
Query: 300 -NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
M R+ + + +YN ++NA Q + +F ++++ GLKP+ TY + M++
Sbjct: 378 SEMERRG----IPSNTSIYNEIVNAYCKCSQIEEAEGLFVEMKEKGLKPTIVTYNILMDA 433
Query: 359 YRRCL-----------------------LKVLVRAFWEEGKINE-AVAAVRNMEQRGVVG 394
Y R L L+ A+ + K++E A A M+ G+
Sbjct: 434 YSRRLQPEVVESLLLEMHDLGLQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKADGIKP 493
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
T+S Y L C NG+++ A + +K R LE T+T L+ G D +
Sbjct: 494 TSSSYTSLLCAYAVNGQYEKAHITYVDMKKERLKPSLE-TYTALLDIFRRAGDTDKLMET 552
Query: 455 FQHMKDHCEPNIG----TVNAMLKVYSRNDMFSKAKELFEE---------TTRANSSGYT 501
++ M + +G T + +L ++ ++ +A+++ E T N T
Sbjct: 553 WRSMINE---KVGGTRVTFHMVLDGLAKYGLYVQARDVIYEFGNIGLPPTTMTYNILMNT 609
Query: 502 FLSG-------------DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+ G LKPD TYS+M+ A A + Y +K M SG D
Sbjct: 610 YAKGGQHYKLPQLLKEMSALELKPDSVTYSTMIYAYARVRDFSKAFYYHKQMVRSGQVPD 669
Query: 549 QTKHAWLL 556
+ LL
Sbjct: 670 AKSYKKLL 677
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 102/485 (21%), Positives = 184/485 (37%), Gaps = 68/485 (14%)
Query: 232 TKLLAILGKAGRPHEALRIFNLM--LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+L+ +G+ G P L +F M LE+ P A+ V LG+ + E+++++ R
Sbjct: 217 VELMKRMGEEGLPLRCLDLFRWMRVLEE---QPTPQAWLVALVVLGRARMADEVLEILGR 273
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
+ + R + V+YNA ++ ++ + +F+ + K+ ++P
Sbjct: 274 LPHERQFR---------------EAVLYNAAMSGVAYCGRYDDAWTIFEFMEKNSVQPDH 318
Query: 350 ATYGL--------------AMESYRRCLLK----------VLVRAFWEEGKINEAVAAVR 385
T + A E ++R K L++ F +EG EA+
Sbjct: 319 ITSSIMLNVMKKQKVSAKAAWEFFQRMNRKGVKWSLDVSASLIKMFCDEGLKKEALIIQS 378
Query: 386 NMEQRGVVGTASVYYEL--ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM 443
ME+RG+ S+Y E+ A C C+ + + V K K L KP +T+ L+ +
Sbjct: 379 EMERRGIPSNTSIYNEIVNAYCKCSQIEEAEGLFVEMKEKGL---KPTIVTYNILMDAYS 435
Query: 444 DGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
+ S+ M D +PN + N ++ Y R S+ E +
Sbjct: 436 RRLQPEVVESLLLEMHDLGLQPNARSYNCLISAYGRQKKMSEKAE----------DAFLR 485
Query: 503 LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRA 562
+ DG +KP +Y+S+L A A Q+E Y M + + LL RA
Sbjct: 486 MKADG--IKPTSSSYTSLLCAYAVNGQYEKAHITYVDMKKERLKPSLETYTALLDIFRRA 543
Query: 563 GKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQW 622
G L + S++ + F +L Y +A +I T +
Sbjct: 544 GDTDKLMETWRSMINEKVGGTRVTFHMVLDGLAKYGLYVQARDVIYEFGNIGLPPTTMTY 603
Query: 623 TELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERDLSSSAHF 682
L + KL +LL + +T S + ++A R RD S + ++
Sbjct: 604 NILMNTYAKGGQHYKLPQLLKEMSALELKPDSVTYSTM---IYAYARV---RDFSKAFYY 657
Query: 683 GSQAI 687
Q +
Sbjct: 658 HKQMV 662
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 154/361 (42%), Gaps = 42/361 (11%)
Query: 160 VLVDRLSEREMTAKN-WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG 218
++++ + +++++AK W+F + MN+ G+ ++ L+K D+G ++A+ + +
Sbjct: 323 IMLNVMKKQKVSAKAAWEFFQRMNRKGVKWSLDVSASLIKMFCDEGLKKEALIIQSEM-- 380
Query: 219 LKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG-- 275
++R + S +Y +++ K + EA +F M E L P I Y+ +
Sbjct: 381 --ERRGIPSNTSIYNEIVNAYCKCSQIEEAEGLFVEMKEK-GLKPTIVTYNILMDAYSRR 437
Query: 276 -QVGLLKELVKLIERMRQKPSKRIKN-----------MHRKNWDPVL-------EPDLVV 316
Q +++ L+ + + +P+ R N M K D L +P
Sbjct: 438 LQPEVVESLLLEMHDLGLQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKADGIKPTSSS 497
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGK 376
Y ++L A + Q++ + ++K LKPS TY ++ +RR G
Sbjct: 498 YTSLLCAYAVNGQYEKAHITYVDMKKERLKPSLETYTALLDIFRRA------------GD 545
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
++ + R+M V GT ++ + L G + A V+ + ++ P +T+
Sbjct: 546 TDKLMETWRSMINEKVGGTRVTFHMVLDGLAKYGLYVQARDVIYEFGNI-GLPPTTMTYN 604
Query: 437 GLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
L+ + GG + + M +P+ T + M+ Y+R FSKA ++ R+
Sbjct: 605 ILMNTYAKGGQHYKLPQLLKEMSALELKPDSVTYSTMIYAYARVRDFSKAFYYHKQMVRS 664
Query: 496 N 496
Sbjct: 665 G 665
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/434 (19%), Positives = 171/434 (39%), Gaps = 71/434 (16%)
Query: 125 NWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQS 184
++D V D+F + E R L++ L + + M +
Sbjct: 158 GLCVEDRVSEALDFFHQMFE----TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213
Query: 185 GLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
GL T+ ++ G+ KG A+++L + + + + +Y+ ++ L K GR
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS--HIIPNVVIYSAIIDSLCKDGRH 271
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
+A +F M E ++PD+ Y+S+ V G + +L++ M + RK
Sbjct: 272 SDAQNLFTEMQEK-GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM----------LERK 320
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY----- 359
+ PD+V YNA++NA V ++ ++ ++ G+ P+ TY ++ +
Sbjct: 321 -----ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375
Query: 360 -------------RRC-----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
+ C L+ + +I++ + + M + G+V + Y
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-- 459
L G A+ +++++ S P +T L+ D G + D + +F+ M+
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMIS-SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 460 ----------DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
+ EP++ T N ++ F +A+EL+EE
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG------------- 541
Query: 510 LKPDEYTYSSMLEA 523
+ PD TYSSM++
Sbjct: 542 IVPDTITYSSMIDG 555
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 159/402 (39%), Gaps = 45/402 (11%)
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRI 250
G+ LKL G + A +D + R L S + KL+ ++ + RP + +
Sbjct: 45 GESLKLQSGFHEIKGLEDA---IDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISL 101
Query: 251 FNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL 310
+ M E + DI +++ L+K + P + K L
Sbjct: 102 YQKM-ERKQIRCDIYSFNI-------------LIKCFCSCSKLPFAL--STFGKITKLGL 145
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
PD+V + +L+ + F Q+ ++ +P+ T+ L+
Sbjct: 146 HPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTF------------TTLMNG 193
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
EG+I EAVA + M + G+ T Y + +C G A+ ++ K++ + H P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+ ++ +I S G D ++F M++ P++ T N+M+ + + +S A++L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
+E S PD TY++++ A ++ E +Y M G +
Sbjct: 314 QEMLERKIS-------------PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
++ ++ + + EH F + G P+ + F ++
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/332 (18%), Positives = 136/332 (40%), Gaps = 30/332 (9%)
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
+L+ ++ RM ++P I ++++K + D+ +N ++ + F ++
Sbjct: 84 KLMGVVVRM-ERPDLVI-SLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKIT 141
Query: 342 KSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
K GL P T+ L+ E +++EA+ M + +
Sbjct: 142 KLGLHPDVVTF------------TTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTT 189
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD- 460
L LC GR +A+ +++++ +P +IT+ ++ G +++ + M++
Sbjct: 190 LMNGLCREGRIVEAVALLDRMME-DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEV 248
Query: 461 -HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
H PN+ +A++ ++ S A+ LF E + PD +TY+S
Sbjct: 249 SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG-------------IFPDLFTYNS 295
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 579
M+ ++ +W E + + M D + L+ + GK E +D +L G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 580 EIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
IP+ + ++ M+ Q+ + A + MA
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 111/295 (37%), Gaps = 54/295 (18%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
A R + + + + M E L D Y+++ VG L + L++ M
Sbjct: 408 AKRIDDGMELLHEMTET-GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG------ 460
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-----------GLKPSA 349
L PD+V + +L+ + + K +FK ++KS G++P
Sbjct: 461 ---------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY +L+ EGK EA M RG+V Y + LC
Sbjct: 512 QTY------------NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
R +A + + + S S P +TFT LI G +DD + +F M + N T
Sbjct: 560 SRLDEATQMFDSMGSKSFS-PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
++ + + + A ++F+E SSG + PD T +ML
Sbjct: 619 YITLICGFRKVGNINGALDIFQEMI---SSG----------VYPDTITIRNMLTG 660
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 98/244 (40%), Gaps = 19/244 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ G + AL + M+ L PDI ++ L G LK+ +++ + M
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
QK K + H N +EPD+ YN +++ + ++ +++++ G+ P
Sbjct: 492 -QKSKKDLDASHPFNG---VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY ++ ++ +++EA +M + + L C G
Sbjct: 548 TY------------SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
R D + + ++ R IT+ LI G+I+ + IFQ M P+ T+
Sbjct: 596 RVDDGLELFCEMGR-RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654
Query: 470 NAML 473
ML
Sbjct: 655 RNML 658
>gi|357479161|ref|XP_003609866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510921|gb|AES92063.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 152/387 (39%), Gaps = 85/387 (21%)
Query: 202 DKGSWRQAMSVLDWVYGLKDKRDLKSR-FVYTKLLAILGKAGRPHEALRIFNLMLED-CN 259
DK W QA+ LD L+++ + R Y KL+ +LGK+G+P A ++F M+E+ C+
Sbjct: 114 DKKQWLQALETLDM---LREQSFYQPREGTYMKLIVLLGKSGQPQRAHQLFTAMIEEGCD 170
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
P++ Y ++ + ++ E + +++ M+ P + +PD+ Y+
Sbjct: 171 PTPEL--YTALLAAYCRSNMIDEALSILDEMKNHP--------------LCQPDVFTYST 214
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
++ ACV +++ + +++++ + + P+ T + + Y
Sbjct: 215 LIKACVDIFKFELIELLYEEMAQRSIMPNTVTQNIVLNGY-------------------- 254
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
G A ++ ++ L +G Q A KP T +I
Sbjct: 255 --------------GKAGMFDQMEKVL--SGMLQSA-----------DCKPDVWTMNTII 287
Query: 440 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
+ G ID ++ ++ EP T N ++ Y + M+ K + E +
Sbjct: 288 GVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLQFP 347
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
T TY++++EA A A + EY + M G + D L+
Sbjct: 348 WTT-------------STYNNVIEAFAEAGDAKNMEYTFNQMRSEGMRADTKTFCCLIKG 394
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+ AG L S+ A ++ PL
Sbjct: 395 FANAG---LFHKVISSVQLAAKLEIPL 418
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 100/259 (38%), Gaps = 39/259 (15%)
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRI 298
GKAG + ++ + ML+ + PD+ +++ G +G + + K E+ R
Sbjct: 255 GKAGMFDQMEKVLSGMLQSADCKPDVWTMNTIIGVFGNMGQIDMMEKWYEKFR------- 307
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
N+ +EP+ +N ++ + + + V + +RK + +TY +E
Sbjct: 308 ------NFG--IEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNNVIE- 358
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
AF E G M G+ + CCL + +A L
Sbjct: 359 -----------AFAEAGDAKNMEYTFNQMRSEGMRADTKTF----CCLIKG--FANAGLF 401
Query: 419 VEKIKSLRHSKPLEIT-----FTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAM 472
+ I S++ + LEI + ++ + + + +F MKD C + T + M
Sbjct: 402 HKVISSVQLAAKLEIPLNTAFYNAVLSACAKAEDLMEMDRVFMRMKDTQCPLDDTTYSIM 461
Query: 473 LKVYSRNDMFSKAKELFEE 491
++ Y + M K L +E
Sbjct: 462 VEAYRKEGMNDKIYYLEQE 480
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 154/373 (41%), Gaps = 47/373 (12%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L+D L + T K K +M Q GL L+ L +GS R+A+++ +
Sbjct: 234 LIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKE---MD 290
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYPDIAAYHSVAVTLGQVGL 279
DK Y L+A L EA+ M++ D + PD+ ++SV L ++G
Sbjct: 291 DKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGR 350
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ + VK+ E M ++ +LV YN ++ + H+ K + +
Sbjct: 351 MTQAVKVREMMAERGCM---------------CNLVTYNYLIGGFLRVHKVKMAMNLMDE 395
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
L SGL+P + TY + + + + WE ++ A + M QRG+ Y
Sbjct: 396 LAISGLEPDSFTYSILINGFSK---------MWE---VDRAEKFLCTMRQRGIKAELFHY 443
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
L +C G + AM + ++ ++ I ++ +I + G + + Q M
Sbjct: 444 IPLLAAMCQQGMMERAMGLFNEMD--KNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDML 501
Query: 460 DH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
D P+ T + ++ +Y++ +A+ + ++ T +SG+ PD +
Sbjct: 502 DEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMT---ASGFV----------PDVAVFD 548
Query: 519 SMLEASATAHQWE 531
S+++ + Q +
Sbjct: 549 SLIKGYSAEGQTD 561
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 155/396 (39%), Gaps = 63/396 (15%)
Query: 234 LLAILGKAGRPHEALRIFNLML------EDCNLY---PDI---AAYHSVAVTLGQVGLLK 281
LA+L + GR +A + N L E C+L PD+ +Y++V L + G
Sbjct: 42 FLAVLFRRGRA-DAAALLNRRLRGAPVTEACSLLSALPDVRDAVSYNTVLAALCRRG--- 97
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
+ +RQ S + +M R+ P P+ V Y V+ S + + + ++
Sbjct: 98 -----GDHLRQARSLLV-DMSREAH-PAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQ 150
Query: 342 KSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
SG++ TYG L+R + +++ A+ + M GV VY
Sbjct: 151 ASGVRADVVTYG------------TLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSC 198
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KD 460
L C +GRWQD V E + S R KP I FTGLI G + M +
Sbjct: 199 LLRGYCRSGRWQDVGKVFEDM-SRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQR 257
Query: 461 HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE--------------TTRANSSGY------ 500
EPN+ T N ++ + +A L +E T A SG
Sbjct: 258 GLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEA 317
Query: 501 -TFL----SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
+FL GD ++PD T++S++ + V + MA GC + + +L
Sbjct: 318 MSFLEEMIQGDTV-VEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYL 376
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ R K + + D L +G P ++ ++
Sbjct: 377 IGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILI 412
>gi|168045050|ref|XP_001774992.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673739|gb|EDQ60258.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 138/352 (39%), Gaps = 56/352 (15%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y KLL +L KA + EA +F+ +LED L P A + ++ Q K+ +++ E
Sbjct: 36 TYLKLLTMLAKAKQAAEASNVFDCLLED-KLRPTTAIFTALLTVFTQSNQFKKALEIFES 94
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
MR PD Y A++ C + + +F ++ G+KPS
Sbjct: 95 MRLYEG--------------CVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGVKPSI 140
Query: 350 ATYGLAMESYRRCLL-----------------------KVLVRAFWEEGKINEAVAAVRN 386
TY + + Y + L L+R F KI E A
Sbjct: 141 VTYNILIHGYGKAGLFREVERVLSTMEANNVAPDTVTWNTLIRVFGLNCKIPEMEQAYEG 200
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMDG 445
+ ++G+ L G ++ V + ++ R++ P+ IT+ ++ +
Sbjct: 201 LLRQGLQPDMVTLNSLISAYGTAGLFEKMESVTQYMQ--RYNYPMTRITYNIIMEAYGRA 258
Query: 446 GHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G +D ++ MK + +PN T +ML Y R+ + +++ + +++
Sbjct: 259 GMVDQMEETWKRMKAEFVKPNSSTFCSMLSAYGRHGYWHNVEKVMRQARYFDAA------ 312
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
D Y++ ++A A +E E +++ M L G D ++ L+
Sbjct: 313 --------DTAVYNAAIDAFQRAQNFEDMEKIFEEMKLKGHAPDDVTYSILI 356
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 137/370 (37%), Gaps = 37/370 (10%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
DL Y +L + Q VF L + L+P+ A + L+ F
Sbjct: 33 DLSTYLKLLTMLAKAKQAAEASNVFDCLLEDKLRPTTA------------IFTALLTVFT 80
Query: 373 EEGKINEAVAAVRNME-QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ + +A+ +M G V Y + C G + A + +++ + KP
Sbjct: 81 QSNQFKKALEIFESMRLYEGCVPDKYTYTAMIKGCCEAGLYVQARKIFDEMM-IEGVKPS 139
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+T+ LI G + + M+ ++ P+ T N +++V+ N + ++ +E
Sbjct: 140 IVTYNILIHGYGKAGLFREVERVLSTMEANNVAPDTVTWNTLIRVFGLNCKIPEMEQAYE 199
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
R L+PD T +S++ A TA +E E V + M + +
Sbjct: 200 GLLRQG-------------LQPDMVTLNSLISAYGTAGLFEKMESVTQYMQRYNYPMTRI 246
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ ++ RAG +E + + P+ F ML + ++
Sbjct: 247 TYNIIMEAYGRAGMVDQMEETWKRMKAEFVKPNSSTFCSMLSAYGRHGYWHNVEKVMRQA 306
Query: 611 AYAPFHITERQWTELFESNEDRISR----DKLEKLLNALCNCNAASSEITVSNLSRALHA 666
Y F + T ++ + D R + +EK+ + A ++T S L A
Sbjct: 307 RY--FDAAD---TAVYNAAIDAFQRAQNFEDMEKIFEEMKLKGHAPDDVTYSILIGAYER 361
Query: 667 LCRSEKERDL 676
+ R +K RDL
Sbjct: 362 IRRVDKARDL 371
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 120/283 (42%), Gaps = 26/283 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L PD+V +N +L+ + +F Q+ ++ +P+ T+ L+
Sbjct: 145 LHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF------------TTLMN 192
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
EG+I EAVA + M + G+ T Y + +C G A+ ++ K++ + H
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHII 252
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P + ++ +I S G D ++F M++ P++ T N+M+ + + +S A++L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+E S PD TY++++ A ++ E +Y M G +
Sbjct: 313 LQEMLERKIS-------------PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
++ ++ + + EH F + G P+ + F ++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 90/445 (20%), Positives = 170/445 (38%), Gaps = 60/445 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVY--GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNL 253
L+ GL +G +A+++LD + GL+ ++ Y ++ + K G AL +
Sbjct: 190 LMNGLCREGRIVEAVALLDRMMEDGLQ-----PTQITYGTIVDGMCKIGDTVSALDLLRK 244
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M E ++ P++ Y ++ +L + G + L M++K + PD
Sbjct: 245 MEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG---------------IFPD 289
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
L YN+++ S +W + +++ + + P TY L+ AF +
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY------------NALINAFVK 337
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
EGK EA M RG++ Y + C R DA + + + + P I
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL-DAAEHMFYLMATKGCSPNLI 396
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
TF LI IDD + + M + + T N ++ + + A +L +E
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM-----------A 541
SSG L PD T ++L+ + + ++K M
Sbjct: 457 I---SSG----------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHP 503
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 601
+G + D + L+ GK E ++ + G +P + ++ M+ QS +
Sbjct: 504 FNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 563
Query: 602 KAVALINAMAYAPFHITERQWTELF 626
+A + ++M F +T L
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLI 588
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 111/295 (37%), Gaps = 54/295 (18%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
A R + + + + M E L D Y+++ VG L + L++ M
Sbjct: 408 AKRIDDGMELLHEMTET-GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG------ 460
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-----------GLKPSA 349
L PD+V + +L+ + + K +FK ++KS G++P
Sbjct: 461 ---------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY +L+ EGK EA M RG+V Y + LC
Sbjct: 512 QTY------------NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
R +A + + + S S P +TFT LI G +DD + +F M + N T
Sbjct: 560 SRLDEATQMFDSMGSKSFS-PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
++ + + + A ++F+E SSG + PD T +ML
Sbjct: 619 YITLICGFRKVGNINGALDIFQEMI---SSG----------VYPDTITIRNMLTG 660
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 98/244 (40%), Gaps = 19/244 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ G + AL + M+ L PDI ++ L G LK+ +++ + M
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
QK K + H N +EPD+ YN +++ + ++ +++++ G+ P
Sbjct: 492 -QKSKKDLDASHPFNG---VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY ++ ++ +++EA +M + + L C G
Sbjct: 548 TY------------SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
R D + + ++ R IT+ LI G+I+ + IFQ M P+ T+
Sbjct: 596 RVDDGLELFCEMGR-RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654
Query: 470 NAML 473
ML
Sbjct: 655 RNML 658
>gi|357125122|ref|XP_003564244.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Brachypodium distachyon]
Length = 502
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 122/284 (42%), Gaps = 40/284 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
+Y KL+ +LGK +P +A +F M+++ P++ +Y ++ + G L++R
Sbjct: 153 IYIKLITMLGKCKQPGKAHELFQAMVDE-GCAPNLESYTALVSAYSRSGSFDRAFSLLDR 211
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ P R PD+ Y+ ++ +C+ ++ + V + + G++P+
Sbjct: 212 MKATPGCR--------------PDVQTYSILIKSCLHAYDFDKVKDLLADMACGGIRPNT 257
Query: 350 ATYGLAMESYRRC---------LLKVL--------------VRAFWEEGKINEAVAAVRN 386
TY +++Y + LL++L +RAF G+I +
Sbjct: 258 VTYNTLVDAYGKAGRFAEMESTLLEMLSEKCKPDVWTMNSTLRAFGSSGQIEMMESCYEK 317
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
+ G+ Y L ++ V+E ++ +S + +T+ +I + G
Sbjct: 318 FQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTI-VTYNVVIDAFGRAG 376
Query: 447 HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
++ IF+ MK D +PN T+ ++++ Y R D K + +
Sbjct: 377 DLEQMEYIFRLMKSDRIKPNCVTLCSLIRAYGRADQVKKIETVL 420
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 13/167 (7%)
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
RW+ A+ V E ++ +P + LI +FQ M D C PN+ +
Sbjct: 130 RWESALKVFELMRDQVWYRPYVGIYIKLITMLGKCKQPGKAHELFQAMVDEGCAPNLESY 189
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
A++ YSR+ F +A L + +PD TYS ++++ A+
Sbjct: 190 TALVSAYSRSGSFDRAFSLLDRMKATPGC------------RPDVQTYSILIKSCLHAYD 237
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
++ + + MA G + + + L+ +AG+ +E +L
Sbjct: 238 FDKVKDLLADMACGGIRPNTVTYNTLVDAYGKAGRFAEMESTLLEML 284
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/303 (19%), Positives = 126/303 (41%), Gaps = 38/303 (12%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY------------- 359
D+ +Y AV+NA + + V + +G++P+ TYG+ + +
Sbjct: 281 DVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLL 340
Query: 360 ----------RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+ + ++ + +G +++A+ ME+ GV Y LAC LC
Sbjct: 341 ADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRV 400
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 468
R +A ++ + + P +T+T LI G + + +F+ M + P++ T
Sbjct: 401 NRLDEAKTLLHIMIEM-GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVT 459
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
N M+ Y++ +A+ +E + G+ PD YTY+S++
Sbjct: 460 YNVMIDGYTKKGSIREAERFRKEMEK---KGFV----------PDVYTYASLVHGHCVNG 506
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ + +++ M G + + + L+ ++ G+ +D +L+AG IP ++
Sbjct: 507 KVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYS 566
Query: 589 EML 591
++
Sbjct: 567 ALV 569
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 29/213 (13%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
++ ++ ++ + G +AL+I M E + DI Y+++A L +V L E L
Sbjct: 351 NQIIFNTMIDGYCRKGMVDDALKIKAAM-EKMGVELDIYTYNTLACGLCRVNRLDEAKTL 409
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ M + + P+ V Y +++ +F+++ + G
Sbjct: 410 LHIMIEMG---------------VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGAT 454
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
PS TY V++ + ++G I EA + ME++G V Y L
Sbjct: 455 PSVVTY------------NVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGH 502
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
C NG+ A+ + E++K R ++P + +T LI
Sbjct: 503 CVNGKVDVALKLFEEMKQ-RGTEPNVVAYTALI 534
>gi|110740599|dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 167/393 (42%), Gaps = 65/393 (16%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
W++++++LDWV+ ++ + S F Y +L + +A + A +F+ M + L PD
Sbjct: 3 WQRSLALLDWVH--EEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRA-LAPDRY 59
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKP---------------------SKRIKNMHRK 304
Y ++ + G+ G+ + +++M Q SK I R
Sbjct: 60 TYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRL 119
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL 364
+ PDLV YN+++N + ++ + K++ ++G+ P+ +Y
Sbjct: 120 KRSGI-TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYS----------- 167
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK- 423
L+ + E K EA++ M++ + +L C + +V E +
Sbjct: 168 -TLLSVYVENHKFLEALSVFAEMKE------VNCALDLTTCNIMIDVYGQLDMVKEADRL 220
Query: 424 --SLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 478
SLR +P +++ ++ + + I +F+ M + E N+ T N M+K+Y +
Sbjct: 221 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 280
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
KA L +E S G ++P+ TYS+++ A + + +++
Sbjct: 281 TMEHEKATNLVQEM---QSRG----------IEPNAITYSTIISIWGKAGKLDRAATLFQ 327
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
+ SG ++DQ + ++V R G L+ HA
Sbjct: 328 KLRSSGVEIDQVLYQTMIVAYERVG---LMGHA 357
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/400 (19%), Positives = 161/400 (40%), Gaps = 50/400 (12%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
++ MN++G++ LL + + +A+SV + + DL + + ++
Sbjct: 150 LIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNI---MID 206
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
+ G+ EA R+F L ++ P++ +Y+++ G+ L E + L M++K
Sbjct: 207 VYGQLDMVKEADRLF-WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKD-- 263
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
+E ++V YN ++ + + + + ++++ G++P+A TY
Sbjct: 264 -------------IEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYS--- 307
Query: 357 ESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
++ + + GK++ A + + GV +Y + G A
Sbjct: 308 ---------TIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAK 358
Query: 417 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKV 475
++ ++K L + P E T L G ++ +F+ + E +I M+ +
Sbjct: 359 RLLHELK-LPDNIPRETAITIL----AKAGRTEEATWVFRQAFESGEVKDISVFGCMINL 413
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
YSRN + E+FE + ++GY PD + +L A ++E +
Sbjct: 414 YSRNQRYVNVIEVFE---KMRTAGYF----------PDSNVIAMVLNAYGKQREFEKADT 460
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
VY+ M GC H +L S ++E F L
Sbjct: 461 VYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRL 500
>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 182/449 (40%), Gaps = 63/449 (14%)
Query: 192 QMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIF 251
Q +LL L R+A+ V++ + G D S YT L++ L + G A+++
Sbjct: 99 QATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAAS---YTFLVSSLCRKGNVGYAMQLV 155
Query: 252 NLMLEDCNLYP-DIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PS------------ 295
+ M E YP + A Y+S+ L G L + ++L++R+ QK P+
Sbjct: 156 DKMEEYG--YPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAY 213
Query: 296 -KRIKNMHRKNWDPVL----EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+R + K D ++ +P+LV YN +L + + +F++L G P+
Sbjct: 214 KERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVV 273
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+Y +L+R+ EG+ EA + M+ + Y L L +G
Sbjct: 274 SY------------NILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHG 321
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTV 469
R + A+ V+E++ R KP ++ +I +D + Q M HC PN GT
Sbjct: 322 RTEHALEVLEEMIRARF-KPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTY 380
Query: 470 NAMLKVYSRN---DMFSKAKELFEETTRANSSGYTFL------SGDGAP----------- 509
NA+ + + FS + L + + Y + G+ P
Sbjct: 381 NAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKY 440
Query: 510 -LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLL 568
PD +TYSS++ ++ M +LD + L++ ++ + L
Sbjct: 441 GFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVME-ENIKLDTENYNSLILGCCKSRRTDLA 499
Query: 569 EHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 597
F+ ++ G + + +T +L++ I+
Sbjct: 500 LDVFEIMVGKGYLANETTYT-ILVEGIIH 527
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 116/534 (21%), Positives = 202/534 (37%), Gaps = 91/534 (17%)
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
TA + +R M + + + ++ GL GS A ++ + + K D+ +
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI---II 284
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ AGR + ++ M++ + PD+ A+ ++ + G L+E +L + M
Sbjct: 285 YTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q+ + PD V Y ++++ +Q + + G P+
Sbjct: 344 IQRG---------------ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 351 TYGL-------------AMESYRRCLLK----------VLVRAFWEEGKINEAVAAVRNM 387
T+ + +E +R+ L+ L++ F E GK+ A + M
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGG 446
R V Y L LC+NG + A+ + EKI+ + L+I +II M +
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE--KSKMELDIGIYNIIIHGMCNAS 506
Query: 447 HIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
+DD +F + +P++ T N M+ + S+A LF + S
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS------- 559
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG-- 563
P+ TY+ ++ AH E D TK A L+ E R G
Sbjct: 560 ------PNGCTYNILIR----AHLGEG---------------DATKSAKLIEEIKRCGFS 594
Query: 564 -KCHLLEHAFDSL---LEAGEIPHPLFFTEMLIQAIVQSN---YEKAVALIN--AMAYAP 614
L A +L L+AG P FT +L ++ N Y+ N AM Y P
Sbjct: 595 VDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKP 654
Query: 615 FHITERQWTE-LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRA-LHA 666
+T + L N L+++ C NA + +S L + LH
Sbjct: 655 NVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHG 708
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 138/355 (38%), Gaps = 58/355 (16%)
Query: 288 ERMRQKPSKRIKNMHR--------KNWDPVLEP-----------DLVVYNAVLNACVPSH 328
E R +P R+ + R K +D VL+ +L + ++N C
Sbjct: 62 EMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCR 121
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ F ++ K G +P T+ L+ EG+++EA+ V M
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTF------------STLINGLCLEGRVSEALELVDRMV 169
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
+ G T L LC NG+ DA+L+++++ +P E+T+ ++ G
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF-QPNEVTYGPVLKVMCKSGQT 228
Query: 449 DDCISIFQHMK------DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
+ + + M+ D + +I ++ + K S ++ F+ E+ + +A+ YT
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSI-IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 503 L------SG---DGAPL---------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
L +G DGA L PD +S++++ + E ++K M G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
D + L+ + + H D ++ G P+ F +LI ++N
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF-NILINGYCKAN 401
>gi|356529805|ref|XP_003533478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
chloroplastic-like [Glycine max]
Length = 1092
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 132/342 (38%), Gaps = 51/342 (14%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P L +N +++ C S +G F V + L+ + L+P Y L+
Sbjct: 458 PMLSTFNMLMSVCASSQDSEGAFQVLQLLKDARLEPDCKLY------------TTLILTC 505
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ GK++ M GV Y L G+ A ++S ++ KP
Sbjct: 506 AKSGKVDLMFEVFHKMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGIMRS-KNVKPD 564
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDHCE---PNIGTVNAMLKVYSRNDMFSKAKEL 488
+ F LI + G +D + M + P+ T+ A+LK ++ +AKE+
Sbjct: 565 RVVFNALIAACAQSGALDRAFDVLAEMTAETQPIDPDHVTIGALLKACTKAGQVERAKEV 624
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
++ + N G P+ YT + + + + WE+ VY M G D
Sbjct: 625 YKMVQKYNIKGC-----------PEVYTIA--INSCSQTGDWEFAHTVYNDMTQKGILPD 671
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEKAVA 605
+ + L+ A A K L+ AFD L EA G + + ++ ++ N++KA+
Sbjct: 672 EIFLSALIDVAGHAKK---LDAAFDVLQEARKGGILIGIMSYSSLMGACSNARNWQKALE 728
Query: 606 LINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCN 647
L E +S + I+ + LL ALC+
Sbjct: 729 LY----------------EYLKSLKLTITVSTVNALLTALCD 754
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 110/318 (34%), Gaps = 85/318 (26%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+ +AG+ +A + +M N+ PD ++++ Q G L ++
Sbjct: 532 TYGALIDGCARAGQVAKAFGAYGIMRSK-NVKPDRVVFNALIAACAQSGALDRAFDVLAE 590
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + ++PD V A+L AC + Q + V+K ++K +K
Sbjct: 591 MTAETQP-------------IDPDHVTIGALLKACTKAGQVERAKEVYKMVQKYNIKGCP 637
Query: 350 ATYGLAMESYRRC-----------------------LLKVLVRAFWEEGKINEAVAAVRN 386
Y +A+ S + L L+ K++ A ++
Sbjct: 638 EVYTIAINSCSQTGDWEFAHTVYNDMTQKGILPDEIFLSALIDVAGHAKKLDAAFDVLQE 697
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
+ G++ Y L N WQ A+ + E +KSL+ L IT
Sbjct: 698 ARKGGILIGIMSYSSLMGACSNARNWQKALELYEYLKSLK----LTIT------------ 741
Query: 447 HIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD 506
+ TVNA+L D F KA E+ E
Sbjct: 742 -------------------VSTVNALLTALCDGDQFQKALEVLFEM-------------K 769
Query: 507 GAPLKPDEYTYSSMLEAS 524
G L+P+ T+S ++ AS
Sbjct: 770 GLGLRPNSITFSILIVAS 787
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 142/362 (39%), Gaps = 32/362 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
EPDLV + ++L+ ++ + +F Q+ G +P+ TY L+
Sbjct: 148 FEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTY------------TTLIH 195
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+ +N AV M G+ Y L LC GRW DA ++ + R +
Sbjct: 196 CLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMK-RGIQ 254
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P ITFT LI + + G I + +++ M + P++ T A++ +A+++
Sbjct: 255 PNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQM 314
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F S+GY P+E TY++++ + + E ++ M+ G +
Sbjct: 315 FY---LMESNGY----------YPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVAN 361
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNY-EKAVALI 607
+ L+ G+ + + F+ + + P + +L+ + + Y EKA+ +
Sbjct: 362 TITYTVLIQGYCLVGRPDVAQEVFNQ-MGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIF 420
Query: 608 NAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHAL 667
M I +T + + K+E + C+ + + V + +
Sbjct: 421 KYMRKREMDINIVTYTIIIQG---MCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 477
Query: 668 CR 669
CR
Sbjct: 478 CR 479
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 145/365 (39%), Gaps = 49/365 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T LL R +AL +F+ ++ P++ Y ++ L + L V++ +M
Sbjct: 155 FTSLLHGFCHWNRIEDALALFDQIV-GMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQM 213
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
D + P++V YN++++ +W W+ + + K G++P+
Sbjct: 214 ---------------GDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVI 258
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
T+ L+ AF + GKI EA + M Q V Y L LC G
Sbjct: 259 TF------------TALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYG 306
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
R +A + ++S P E+T+T LI ++D IF M + N T
Sbjct: 307 RLDEARQMFYLMES-NGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITY 365
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
+++ Y A+E+F + + AP PD TY+ +L+
Sbjct: 366 TVLIQGYCLVGRPDVAQEVFNQ-----------MGSRRAP--PDIRTYNVLLDGLCYNGY 412
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD---SLLEAGEIPHPLF 586
E ++K M ++ + ++ + GK +E AFD SL G P+ +
Sbjct: 413 VEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGK---VEDAFDLFCSLFSKGMKPNVIT 469
Query: 587 FTEML 591
+T M+
Sbjct: 470 YTTMI 474
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 119/297 (40%), Gaps = 50/297 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ GL + G W A W+ KR ++ + +T L+ K G+ EA ++ +M
Sbjct: 228 LVSGLCEIGRWSDA----AWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVM 283
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
++ ++YPD+ Y ++ L G L E ++ M P+
Sbjct: 284 IQM-SVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNG---------------YYPNE 327
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL---------- 364
V Y +++ S + + +F ++ + GL + TY + ++ Y CL+
Sbjct: 328 VTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGY--CLVGRPDVAQEVF 385
Query: 365 ---------------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
VL+ G + +A+ + M +R + Y + +C
Sbjct: 386 NQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKV 445
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPN 465
G+ +DA + + S + KP IT+T +I G I + ++F+ MK D PN
Sbjct: 446 GKVEDAFDLFCSLFS-KGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 145/359 (40%), Gaps = 58/359 (16%)
Query: 151 WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
+ + LV+ L ++ + + V M+ G L+ G KG +A
Sbjct: 378 YVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEA- 436
Query: 211 SVLDWVYGLKDKRDLKSRFV-----YTKLLAILGKAGRPHEALRIFNLML-EDCNLYPDI 264
GL + L F Y L++ L K G+ HEAL +F M + C PDI
Sbjct: 437 -------GLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCK--PDI 487
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMR------------------------QKPSKRIKN 300
++S+ L +V +++ + L M Q+ K + +
Sbjct: 488 FTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVND 547
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
M + P+ D + YN ++ A + + +F+++ + GL PS T
Sbjct: 548 MLFRGC-PL---DEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIIT--------- 594
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
+L+ F GK++ A+ +R+M RG Y L LC GR Q+A+ + E
Sbjct: 595 ---CNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFE 651
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDD-CISIFQHMKDHCEPNIGTVNAMLKVYSR 478
K+++ +P IT+ LI G DD C +++ +++ PN T N ++ + +
Sbjct: 652 KLQA-EGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGK 709
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 78/400 (19%), Positives = 142/400 (35%), Gaps = 50/400 (12%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY-------RRCL 363
EP YN VL+ V + VF + G+ P+ T+GL M++ CL
Sbjct: 172 EPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACL 231
Query: 364 L----------------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
L + L+ A + +++EA+ + M G + + + C
Sbjct: 232 LLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFC 291
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIG 467
R + +V+++ L+ P ++T+ L+ ID+ ++ + PN+
Sbjct: 292 RLNRVLEGAKLVDRM-ILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG---PNVV 347
Query: 468 TVNAMLKVYSRNDMFSKAK--------------ELFEETTRANSSGYTFLSG-------- 505
N ++ + RN ++A ++F +T N L G
Sbjct: 348 HFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVND 407
Query: 506 -DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
D KP+ TY+ +++ Q E + + M G L+ + L+ + GK
Sbjct: 408 MDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGK 467
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 624
H F + G P F ++ E A+AL M +
Sbjct: 468 IHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNT 527
Query: 625 LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRAL 664
L + R + KL+N + EIT + L +AL
Sbjct: 528 LIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKAL 567
>gi|125525011|gb|EAY73125.1| hypothetical protein OsI_00999 [Oryza sativa Indica Group]
Length = 634
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 155/404 (38%), Gaps = 94/404 (23%)
Query: 152 RSEAEAIRVLVDRLSE-REMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
R ++ L++ L E R M F+R M SG T L+KG
Sbjct: 146 RPDSIFFNALINALVEARRMGEATNTFLR-MGHSGCRPTASTFNTLIKGY---------- 194
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM-----LEDCNLYPDIA 265
G AGRP E+ R+F++M + + P++
Sbjct: 195 ----------------------------GIAGRPEESQRVFDMMASGGAGGEAAVRPNLT 226
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y+ + G L+E +++ RMR + +PD+V YN + +A
Sbjct: 227 TYNILVKAWCDAGRLEEAWRVVARMRASGA---------------DPDVVTYNTLASAYA 271
Query: 326 PSHQ-WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAV 384
+ + W+ V + +++GL+ S T+G+ + Y R EG++ EA+ V
Sbjct: 272 KNDETWRAEELVVEMAQQAGLRTSERTWGIIVGGYCR------------EGRLGEALRCV 319
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS---KPLEITFTGLIIS 441
R M+ GV+ V+ L + + M V+ + L KP +T++ + +
Sbjct: 320 RQMKDSGVLPNVIVFNTLLKGFLD----ANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNA 375
Query: 442 SMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
GH+ C+ +F M + EP+ + + K Y R KA+EL + R
Sbjct: 376 LSSMGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLG---- 431
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
++P+ T+++++ + VY M +G
Sbjct: 432 ---------VRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDAG 466
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 156/413 (37%), Gaps = 67/413 (16%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
T+ + + A RPH+A F +++D + P + Y ++ L
Sbjct: 83 TRQMRAMIDARRPHQAHSAFRHLVDDGH-RPSLVTYTTLLAAL---------------TS 126
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
Q+ I + + D L PD + +NA++NA V + + F ++ SG +P+A+T
Sbjct: 127 QRAFDTIPWLLAEVEDAGLRPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTAST 186
Query: 352 YGLAMESY-----------------------------RRCLLKVLVRAFWEEGKINEAVA 382
+ ++ Y +LV+A+ + G++ EA
Sbjct: 187 FNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWR 246
Query: 383 AVRNMEQRGVVGTASVYYELACCLC-NNGRWQDAMLVVEKIK--SLRHSKPLEITFTGLI 439
V M G Y LA N+ W+ LVVE + LR S E T+ ++
Sbjct: 247 VVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTS---ERTWGIIV 303
Query: 440 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY-SRNDMFSKAKELFEETTRANS 497
G + + + + MKD PN+ N +LK + NDM + L
Sbjct: 304 GGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVL--------- 354
Query: 498 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 557
G G +KPD TYS L A ++ V+ M +G + D ++ L
Sbjct: 355 -GLMEQFG----IKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSILAK 409
Query: 558 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
RA + E + G P+ + FT ++ ++ AV + AM
Sbjct: 410 GYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAAM 462
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/415 (19%), Positives = 167/415 (40%), Gaps = 61/415 (14%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
+F R M SG+ T + +++GL +G ++ ++ G K + + Y ++
Sbjct: 191 EFFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPE---AYTYNTII 247
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
K +I +M +D +Y + + +++ G + ++ KL + MR++
Sbjct: 248 NAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKN-GKMNDVEKLFDEMRERG- 305
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+E D+ VY ++++ K F +F +L + GL PS+ TYG
Sbjct: 306 --------------IESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGAL 351
Query: 356 ME-----------------------SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
++ + + + L+ + +G I+EA ME++G
Sbjct: 352 IDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGF 411
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKI--KSLRHSKPLEITFTGLIISSMDGGHIDD 450
+A C R+ +A + ++ +R S +++T LI G++++
Sbjct: 412 QADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLST---VSYTNLIDVYCKEGNVEE 468
Query: 451 CISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
+F M +PN T N M+ Y + +A++L+ +AN
Sbjct: 469 AKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWA-NMKANG------------ 515
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+ PD YTY+S++ A + ++ M L G + + ++ S+AGK
Sbjct: 516 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGK 570
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 79/394 (20%), Positives = 143/394 (36%), Gaps = 73/394 (18%)
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+K K IK K ++P+ YN ++NA + + GV + K ++K G+ + T
Sbjct: 222 EKSKKLIKEFSGKG----IKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVT 277
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y L +E L V + GK+N+ M +RG+ VY L C G
Sbjct: 278 YTLLIE------LSV------KNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGN 325
Query: 412 WQDAMLVVEKI--KSL-----------------------------RHSKPLEIT---FTG 437
+ A L+ +++ K L SK + IT F
Sbjct: 326 IKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNT 385
Query: 438 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE----LFEET 492
LI G ID+ I+ M K + ++ T N + ++R + +AK+ + E
Sbjct: 386 LINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGG 445
Query: 493 TRANSSGYT------------------FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
R ++ YT F+ ++P+ TY+ M+ A + +
Sbjct: 446 VRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEAR 505
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 594
++ M +G D + L+ A F + G + + +T M+
Sbjct: 506 KLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGL 565
Query: 595 IVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
++A L + + + I + +T L S
Sbjct: 566 SKAGKSDEAFGLYDEIKRKGYTIDNKVYTALIGS 599
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 408 NNGRWQDAMLVVEKI--KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 464
+NG +++ + V + + K L + I F ++++ ID C+ F+ M D +
Sbjct: 147 DNGMFEEGLRVFDYMVKKGLSIDERSCIVF---LVAAKKRRRIDLCLEFFRRMVDSGVKI 203
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
+ ++ +++ R K+K+L +E SG G +KP+ YTY++++ A
Sbjct: 204 TVYSLTIVVEGLCRRGEVEKSKKLIKE-----------FSGKG--IKPEAYTYNTIINAY 250
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
+ E + K M G ++ + L+ + + GK + +E FD + E G
Sbjct: 251 LKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDI 310
Query: 585 LFFTEMLIQAIVQSNYEKAVALINAMA 611
+T ++ + N ++A L + +
Sbjct: 311 HVYTSLISWNCRKGNIKRAFLLFDELT 337
>gi|357512797|ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520709|gb|AET01163.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 501
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 120/287 (41%), Gaps = 45/287 (15%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PDI +Y+ + L + L + I+ MR K +D ++P+LV Y ++
Sbjct: 196 PDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTK------------FD--VKPNLVTYTILI 241
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
+ + + + L + G KP Y M+ Y C+L + +EA+
Sbjct: 242 DNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGY--CML----------SRGSEAI 289
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
M+++GV Y L L +GR +A ++ + H P E+T+T L+
Sbjct: 290 EVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHF-PDEVTYTSLMNG 348
Query: 442 SMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
G +++ + M+ C PN T N +L ++ MF KA EL Y
Sbjct: 349 MCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMEL-----------Y 397
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASAT----AHQWEYFEYVYKGMALS 543
+ DG LK D +Y++ + A + A +E F+Y + +LS
Sbjct: 398 GAMKSDG--LKLDMASYATFVRALCSVGRVADAYEVFDYAVESKSLS 442
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 66/377 (17%), Positives = 139/377 (36%), Gaps = 44/377 (11%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
K+ EA IFN + N D ++S+ + + + + + + M +
Sbjct: 62 KSPNLQEAKSIFNSFVNSSNAPIDSRFHNSLLQSYASISTINDSIAFLRHMTKT------ 115
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG-----VFWVFKQLRKSGLKPSAATYGL 354
P PD Y+ +L C S K + + G+ P T L
Sbjct: 116 -------HPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDL 168
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
A VR+ ++++AV ++ + + Y L LC +
Sbjct: 169 A------------VRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSL 216
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAML 473
++++++ KP +T+T LI + + ++ + + +++ +P+ N ++
Sbjct: 217 VYAFIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIM 276
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
K Y M S+ E E R G ++PD TY++++ + + +
Sbjct: 277 KGYC---MLSRGSEAIEVYNRMKEKG----------VEPDLITYNTLIFGLSKSGRVSEA 323
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 593
+ + + MA G D+ + L+ R G+ + + G P+ + +L
Sbjct: 324 KKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHG 383
Query: 594 AIVQSNYEKAVALINAM 610
++KA+ L AM
Sbjct: 384 LCKSRMFDKAMELYGAM 400
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 64/332 (19%), Positives = 118/332 (35%), Gaps = 44/332 (13%)
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDP 308
+ NLM+ D + PD +L + + V+LI+ + K
Sbjct: 149 QTLNLMVSD-GISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKHC------------- 194
Query: 309 VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR-KSGLKPSAATYGLAMESYRRCLLKVL 367
PD+ YN ++ S V+ ++R K +KP+ TY +L
Sbjct: 195 --SPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTY------------TIL 240
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
+ + EA V +E+ G +Y + C R +A+ V ++K +
Sbjct: 241 IDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKE-KG 299
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAK 486
+P IT+ LI G + + + + M + P+ T +++ R A
Sbjct: 300 VEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAAL 359
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
L EE S P+ TY+++L + ++ +Y M G +
Sbjct: 360 ALLEEMEMKGCS-------------PNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLK 406
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 578
LD +A + G+ FD +E+
Sbjct: 407 LDMASYATFVRALCSVGRVADAYEVFDYAVES 438
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 84/221 (38%), Gaps = 31/221 (14%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + + + + V I+ + G ++KG +A+ V + +
Sbjct: 239 ILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNR---M 295
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+K Y L+ L K+GR EA ++ +M E + +PD Y S+ + + G
Sbjct: 296 KEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGH-FPDEVTYTSLMNGMCRKGE 354
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ L+E M K P+ YN +L+ S + ++
Sbjct: 355 TLAALALLEEMEMKGC---------------SPNTCTYNTLLHGLCKSRMFDKAMELYGA 399
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA 380
++ GLK A+Y VRA G++ +A
Sbjct: 400 MKSDGLKLDMASYA------------TFVRALCSVGRVADA 428
>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 183/434 (42%), Gaps = 67/434 (15%)
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDC 258
L ++ W +A+ + +W LK K + + Y +L ILGKA + H +++ M+
Sbjct: 170 LKEQSCWERALEIFEW---LKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSR- 225
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
+ P + Y ++ + GL +E + ++RM ++ +EPD V
Sbjct: 226 GITPVNSTYGTLIDVYSKGGLTEEALHWLDRMNKQG---------------MEPDEVTMG 270
Query: 319 AVLNACVPSHQWKGVFWVFKQ------LRKSGLKPSAATYGLAMESYRR---CL----LK 365
V+ + ++K FK L+ G K S T A+ES + CL
Sbjct: 271 VVVQTYKKAGEFKKAEQFFKNWSLGKTLKDEG-KTSEPTATSAVESASQPHVCLSSYTYN 329
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
L+ + + G++ EA M + G++ + + N+G+ ++A +++K++ L
Sbjct: 330 TLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEEL 389
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSK 484
R P T+ LI +ID S F+ MK+ EP++ + +L +S + +
Sbjct: 390 R-CPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIRHLVGE 448
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSM----LEASATAHQWEYFEYVY-KG 539
A+ L E D L+ DE+T S++ +EA W +F + +G
Sbjct: 449 AEILVSEM-------------DERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEG 495
Query: 540 MALSGC---QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 596
S C +D ++EA +A C E S+LE F M+ +
Sbjct: 496 NMSSECYSANIDAYGERGHILEAEKAFLC-CKESRKLSVLE---------FNVMIKAYGI 545
Query: 597 QSNYEKAVALINAM 610
+ YEKA LI++M
Sbjct: 546 SNRYEKACQLIDSM 559
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 95/478 (19%), Positives = 191/478 (39%), Gaps = 76/478 (15%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL-DWVYG 218
L+D S+ +T + ++ MN+ G+ E M +++ G +++A +W G
Sbjct: 236 TLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLG 295
Query: 219 --LKDKRDLK------------------SRFVYTKLLAILGKAGRPHEALRIFNLMLEDC 258
LKD+ S + Y L+ GKAG+ EA F ML +
Sbjct: 296 KTLKDEGKTSEPTATSAVESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLRE- 354
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
+ P+ ++++ G G L+E L+++M + PD YN
Sbjct: 355 GIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCP---------------PDTRTYN 399
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKIN 378
+++ + FK+++++ L+P +Y + L+ AF +
Sbjct: 400 ILISLHAKHNNIDRAASYFKKMKEARLEPDLVSY------------RTLLYAFSIRHLVG 447
Query: 379 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
EA V M++RG+ L G + + L + L + E ++
Sbjct: 448 EAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFH-LEGNMSSE-CYSAN 505
Query: 439 IISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
I + + GHI + F K+ + ++ N M+K Y ++ + KA +L +
Sbjct: 506 IDAYGERGHILEAEKAFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQLID-------- 557
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATA---HQWEYFEYVYKGMALSGCQL--DQTKHA 553
S + + PD+++Y+S+++ A+A H+ +++ M + QL D +
Sbjct: 558 -----SMENHGVLPDKFSYNSLIQILASADLPHKAKFYL-----MKMQETQLVSDCIPYC 607
Query: 554 WLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ-SNYEKAVALINAM 610
++ + G+ + E F ++ P + + +LI A N +AV +NA+
Sbjct: 608 AVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYG-ILINAFADVGNVREAVNYVNAL 664
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 124/328 (37%), Gaps = 68/328 (20%)
Query: 167 EREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK 226
E M K+W + R + G M +E + G++G +A K+ R L
Sbjct: 477 EAGMLKKSWLWFRRFHLEGNMSSECYSANI-DAYGERGHILEAEKAF---LCCKESRKL- 531
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S + ++ G + R +A ++ + M E+ + PD +Y+S+ L L +
Sbjct: 532 SVLEFNVMIKAYGISNRYEKACQLIDSM-ENHGVLPDKFSYNSLIQILASADLPHKAKFY 590
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+ +M++ L D + Y AV+++ + Q + +FK++ ++
Sbjct: 591 LMKMQETQ---------------LVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQ 635
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P YG +L+ AF + G + EAV V + G+ A +Y L
Sbjct: 636 PDVVVYG------------ILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLY 683
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNI 466
G ++A E K L+ S+ P++
Sbjct: 684 TKVGYLEEAQ---EAYKMLQASE--------------------------------VGPDV 708
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTR 494
+ N M+ +YS M +A+E+FE R
Sbjct: 709 YSSNCMIDLYSERSMVKQAEEIFESLKR 736
>gi|115435438|ref|NP_001042477.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|17385740|dbj|BAB78680.1| putative leaf protein [Oryza sativa Japonica Group]
gi|113532008|dbj|BAF04391.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|215740499|dbj|BAG97155.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 636
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 155/404 (38%), Gaps = 94/404 (23%)
Query: 152 RSEAEAIRVLVDRLSE-REMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAM 210
R ++ L++ L E R M F+R M SG T L+KG
Sbjct: 146 RPDSIFFNALINALVEARRMGEATNTFLR-MGHSGCRPTASTFNTLIKGY---------- 194
Query: 211 SVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM-----LEDCNLYPDIA 265
G AGRP E+ R+F++M + + P++
Sbjct: 195 ----------------------------GIAGRPEESQRVFDMMASGGAGGEAAVRPNLT 226
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y+ + G L+E +++ RMR + +PD+V YN + +A
Sbjct: 227 TYNILVKAWCDAGRLEEAWRVVARMRASGA---------------DPDVVTYNTLASAYA 271
Query: 326 PSHQ-WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAV 384
+ + W+ V + +++GL+ S T+G+ + Y R EG++ EA+ V
Sbjct: 272 KNDETWRAEELVVEMAQQAGLRTSERTWGIIVGGYCR------------EGRLGEALRCV 319
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS---KPLEITFTGLIIS 441
R M+ GV+ V+ L + + M V+ + L KP +T++ + +
Sbjct: 320 RQMKDSGVLPNVIVFNTLLKGFLD----ANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNA 375
Query: 442 SMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY 500
GH+ C+ +F M + EP+ + + K Y R KA+EL + R
Sbjct: 376 LSSMGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLG---- 431
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
++P+ T+++++ + VY M +G
Sbjct: 432 ---------VRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDAG 466
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 156/413 (37%), Gaps = 67/413 (16%)
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
T+ + + A RPH+A F +++D + P + Y ++ L
Sbjct: 83 TRQMRAMIDARRPHQAHSAFRHLVDDGH-RPSLVTYTTLLAAL---------------TS 126
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
Q+ I + + D L PD + +NA++NA V + + F ++ SG +P+A+T
Sbjct: 127 QRAFDTIPWLLAEVEDAGLRPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTAST 186
Query: 352 YGLAMESY-----------------------------RRCLLKVLVRAFWEEGKINEAVA 382
+ ++ Y +LV+A+ + G++ EA
Sbjct: 187 FNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWR 246
Query: 383 AVRNMEQRGVVGTASVYYELACCLC-NNGRWQDAMLVVEKIK--SLRHSKPLEITFTGLI 439
V M G Y LA N+ W+ LVVE + LR S E T+ ++
Sbjct: 247 VVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTS---ERTWGIIV 303
Query: 440 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY-SRNDMFSKAKELFEETTRANS 497
G + + + + MKD PN+ N +LK + NDM + L
Sbjct: 304 GGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVL--------- 354
Query: 498 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 557
G G +KPD TYS L A ++ V+ M +G + D ++ L
Sbjct: 355 -GLMEQFG----IKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSILAK 409
Query: 558 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
RA + E + G P+ + FT ++ ++ AV + AM
Sbjct: 410 GYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAAM 462
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 156/393 (39%), Gaps = 53/393 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+++ L G QA+ V + +K + + S Y L+ AG +AL +F M
Sbjct: 16 VVQSLAKAGMLAQALEVFET---MKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMK 72
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP--------SKRIKNMHRKNWD 307
+ + PD Y+++ L G + KL+ MR K S IK++ K
Sbjct: 73 REKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLV-KEAK 131
Query: 308 P-----VLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
P VLE PD+ +N V+ S+ + V++ + +SG KP +Y
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSY-- 189
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR--GVVGTASVYYELACCLCNNGRW 412
+L+ + GK++E++ + M R G V + L LC G
Sbjct: 190 ----------HILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGEL 239
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNA 471
+ A+ V + KP + T+T LI + +F+ M C P+ N+
Sbjct: 240 EKALEVFGSMLE-AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 298
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
++ Y + +A++L+ E +SG GA L+P T++++++ +
Sbjct: 299 LIAGYCKRGSMDEAEKLYRE-----------MSG-GAGLQPTIVTFNTLIDGFCKLGKLG 346
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
+ M G D + L+ SRA K
Sbjct: 347 RANELVAEMGTKGLAADTCTYRILIAGLSRATK 379
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 57/341 (16%), Positives = 124/341 (36%), Gaps = 67/341 (19%)
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
AY V +L + G+L + +++ E M+ + P LV YN ++N+
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCV---------------PSLVTYNVLINSRC 56
Query: 326 PSHQWKGVFWVFKQL-RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAV 384
+ ++ +F+ + R+ ++P TY L+ G A +
Sbjct: 57 NAGEFGKALDLFQSMKREKRVEPDRWTY------------NTLISGLCSSGNTEGARKLL 104
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
M + + Y + L + +++ V+E++ + P F G++
Sbjct: 105 SEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMA-AGCNPDVFAFNGVMQGFAR 163
Query: 445 GGHIDDCISIFQHMKD--------------HCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+++ ++QHM + H IG ++ LK+ S M
Sbjct: 164 SNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAM--------- 214
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
++GY P+ T+S+++ + E V+ M +GC+ ++
Sbjct: 215 -----RAAGYV----------PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKY 259
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L+ RA K F+ + +A P + + ++
Sbjct: 260 TYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLI 300
>gi|357138098|ref|XP_003570635.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Brachypodium distachyon]
Length = 519
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 165/400 (41%), Gaps = 46/400 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L + LG W Q + + W+ K + + +Y+KL++++GK G+ A+ +F+ M
Sbjct: 82 LFEELGRHDGWVQCLEIFRWMQ--KQRWYVADNGIYSKLISVMGKKGQIRMAMWLFSQM- 138
Query: 256 EDCNLYPDIAAYHS-VAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ PD + Y+S + L K L K + ++K + R +P++
Sbjct: 139 RNSGCKPDTSVYNSLIGAHLHSRDKSKALAKALGYF-----DKMKTIER------CQPNI 187
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V YN +L AC + K V +FK L +S + P TY ++ Y +
Sbjct: 188 VTYNILLRACARASDAKQVEILFKDLDESLVTPDIYTYNGVIDGYGK------------N 235
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLE 432
G I E + + M+ + + L + + GR Q + + KSL SK P
Sbjct: 236 GMIKEMESVLVRMKSKQCRPDVITFNIL---IDSYGRKQIFDKMEQVFKSLLRSKERPTH 292
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
TF +I + + S+ + M + +P+ T ++ +Y+ D SKA+++F+E
Sbjct: 293 PTFNSMITNYGKARLKEKAESVLEKMDELGFKPSYVTQECLIMMYAYCDCVSKAQQIFDE 352
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
+ S+ PL + ++ML+A + + G +
Sbjct: 353 LVNSQST---------VPLS----SLNAMLDAYCMNRLPMEADRLLDAAIEKGVVPGAST 399
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ L +RA L++ + + G +P+ FF + L
Sbjct: 400 YKLLYKAYTRANDKVLVQKLLGRMNKQGIVPNKKFFLDAL 439
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 123/295 (41%), Gaps = 39/295 (13%)
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+QR V +Y +L + G+ + AM + ++++ KP + LI G H
Sbjct: 104 KQRWYVADNGIYSKLISVMGKKGQIRMAMWLFSQMRN-SGCKPDTSVYNSLI-----GAH 157
Query: 448 IDD---------CISIFQHMK--DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
+ + F MK + C+PNI T N +L+ +R + + LF++
Sbjct: 158 LHSRDKSKALAKALGYFDKMKTIERCQPNIVTYNILLRACARASDAKQVEILFKDL---- 213
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
D + + PD YTY+ +++ + E V M C+ D L+
Sbjct: 214 ---------DESLVTPDIYTYNGVIDGYGKNGMIKEMESVLVRMKSKQCRPDVITFNILI 264
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI---QAIVQSNYEKAVALINAMAYA 613
R +E F SLL + E P F M+ +A ++ E + ++ + +
Sbjct: 265 DSYGRKQIFDKMEQVFKSLLRSKERPTHPTFNSMITNYGKARLKEKAESVLEKMDELGFK 324
Query: 614 PFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALC 668
P ++T+ ++ + D +S K +++ + L N + S + +S+L+ L A C
Sbjct: 325 PSYVTQECLIMMY-AYCDCVS--KAQQIFDELVN---SQSTVPLSSLNAMLDAYC 373
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 146/372 (39%), Gaps = 57/372 (15%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
+ +R ++ SGL+ + GL G + +AM +L+ + G K S + ++
Sbjct: 449 RLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLG---KGIPPSVVAFNSII 505
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK-- 293
A G AG A + +M++ L P + S+ ++L + G L E + M K
Sbjct: 506 AAYGNAGLEERAFYAYGIMVK-FGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGF 564
Query: 294 PSKRIK--------------NMHRKNWDPV----LEPDLVVYNAVLNACVPSHQWKGVFW 335
P + NM W+ + + PD V + A +N S +
Sbjct: 565 PVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYD 624
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
VF + + G P+ Y L+ F + GK+NEA+ VR M +RG++
Sbjct: 625 VFSDMLRKGFVPNNFVY------------NSLIGGFCKVGKLNEALKLVREMNKRGLLPD 672
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI---ISSMDGGHIDDCI 452
+ C LC GR + A+ + + S P +T+ LI + D G DD
Sbjct: 673 IFTVNMIICGLCKQGRMKLAIETFMDMCRMGLS-PDIVTYNTLIDGYCKAFDVGGADD-- 729
Query: 453 SIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 511
+ M D EP++ T N + Y ++A + EE +
Sbjct: 730 -LMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVG-------------IV 775
Query: 512 PDEYTYSSMLEA 523
P+ TY++M+ A
Sbjct: 776 PNTVTYNTMINA 787
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 28/184 (15%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ + FVY L+ K G+ +EAL++ M + L PDI + + L + G +K +
Sbjct: 635 VPNNFVYNSLIGGFCKVGKLNEALKLVREMNKR-GLLPDIFTVNMIICGLCKQGRMKLAI 693
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+ +M R L PD+V YN +++ + G + ++ SG
Sbjct: 694 E-----------TFMDMCRMG----LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSG 738
Query: 345 LKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
+P TY + + Y C ++ KIN AV + + G+V Y +
Sbjct: 739 WEPDLTTYNIRIHGY--CTVR----------KINRAVMILEELISVGIVPNTVTYNTMIN 786
Query: 405 CLCN 408
+CN
Sbjct: 787 AVCN 790
Score = 39.3 bits (90), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 83/208 (39%), Gaps = 35/208 (16%)
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLKELVKLIERMRQKPSKRI 298
G+ AL + NLM+E+ P IA + ++ G V L ++ IE M
Sbjct: 337 GQSSYALHLLNLMIEN-GCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMG------- 388
Query: 299 KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
L + +VYN +++ V + +F+++R + P T+
Sbjct: 389 -----------LSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITF------ 431
Query: 359 YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLV 418
LV + GK + +R++ G++ +S+ LC GR+ +AM +
Sbjct: 432 ------NTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKL 485
Query: 419 VEKIKSLRHSKPLEITFTGLIISSMDGG 446
+E + + P + F +I + + G
Sbjct: 486 LENLLG-KGIPPSVVAFNSIIAAYGNAG 512
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 146/343 (42%), Gaps = 38/343 (11%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
++ + GK ++A + M QRG V + L +G LVVE + +R
Sbjct: 231 MMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTPN-LVVELLDMVR 289
Query: 427 HS--KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFS 483
+S +P IT+ L+ + +++ + +F+ M+ H C+P++ T NAM+ VY R + +
Sbjct: 290 NSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAA 349
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS 543
+A+ LF E L G PD TY+S+L A A E + VY+ M
Sbjct: 350 EAERLFIELE---------LKG----FSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE-AGEIPHPLFFTEMLIQAIVQSNYE- 601
G D+ + ++ + G+ L + + +G P + +T +LI ++ ++N
Sbjct: 397 GFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYT-VLIDSLGKANRSV 455
Query: 602 KAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLS 661
+A AL++ M T + ++ L R++ E + + + S +
Sbjct: 456 EAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVM- 514
Query: 662 RALHALCRSEKE-------RDLSSSAHFGSQAIDISPLHGIHE 697
L L R + RD+ S H +P H ++E
Sbjct: 515 --LDVLLRGNETRKAWVLYRDMISDGH--------TPSHSLYE 547
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/443 (20%), Positives = 175/443 (39%), Gaps = 72/443 (16%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVR-IMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
K WR E ++ L D++ ++ K +FV I++ + T ++K +G + SW+
Sbjct: 121 KDWR---ERVKFLTDKI----LSLKPNQFVADILDARPVQMTPTDYCFVVKSVGQE-SWQ 172
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A+ V +W+ L+ +R V +L +LG+ + A+ IF + + + Y
Sbjct: 173 RALEVFEWL-NLRHWHSPNARMV-AAILGVLGRWNQESLAVEIFTR--AEPTVGDRVQVY 228
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKP------------SKRIK------NMHRKNWDPV 309
+++ + G + +L++ MRQ+ + R+K N+ + D V
Sbjct: 229 NAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVELLDMV 288
Query: 310 ----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
L PD + YN +L+AC +G VF+ + +P TY + Y RC L
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348
Query: 366 V-----------------------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
L+ AF E + + M++ G Y +
Sbjct: 349 AEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-H 461
G+ A+ + + +K L P IT+T LI S + ++ M D
Sbjct: 409 IHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVG 468
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
+P + T +A++ Y++ +A++ F R+ + KPD YS ML
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGT-------------KPDNLAYSVML 515
Query: 522 EASATAHQWEYFEYVYKGMALSG 544
+ ++ +Y+ M G
Sbjct: 516 DVLLRGNETRKAWVLYRDMISDG 538
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 88/242 (36%), Gaps = 30/242 (12%)
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD-CISIFQHMKDHCEPNIGTVN 470
WQ A+ V E + +LRH I+ + + + + IF + + N
Sbjct: 171 WQRALEVFEWL-NLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYN 229
Query: 471 AMLKVYSRNDMFSKAKELFEE-----------------TTRANSSGYT---------FLS 504
AM+ VYSR+ FSKA+EL + R S G T +
Sbjct: 230 AMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVELLDMVR 289
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
G L+PD TY+++L A + E V++ M CQ D + ++ R G
Sbjct: 290 NSG--LRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTE 624
E F L G P + + +L + N EK + M F E +
Sbjct: 348 AAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 625 LF 626
+
Sbjct: 408 II 409
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 69/372 (18%), Positives = 148/372 (39%), Gaps = 50/372 (13%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PD+ ++S+ + G ER R M R P +E N +L
Sbjct: 785 PDLKTWNSLMSAYAECGC-------YERARAI----FNTMMRDGPSPTVES----INKLL 829
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
+A + + ++ V ++L+ G K S ++ L ++++ R G I E
Sbjct: 830 HALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARA------------GNIFEVN 877
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
+M+ G + T +Y + LC R +DA ++V +++ L I + L +
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 442 SMDGGHIDD---CISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
++ I+D + ++Q +K+ EP+ T N ++ +Y R+ R
Sbjct: 938 TV----IEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRD--------------RRPE 979
Query: 498 SGYTFLSG-DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
GY+ + L P TY S++ A E E +++ + G +LD++ + ++
Sbjct: 980 EGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMM 1039
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFH 616
+ +G E + AG P +++ N ++A +++ +
Sbjct: 1040 KISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVE 1099
Query: 617 ITERQWTELFES 628
+T ++ + ++
Sbjct: 1100 LTTLPYSSVIDA 1111
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 96/247 (38%), Gaps = 27/247 (10%)
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+Y ++ A W+ V LR+SG P T+ M +Y C G
Sbjct: 754 MYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAEC------------G 801
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
A A M + G T +L LC +GR ++ +VVE+++ + K + +
Sbjct: 802 CYERARAIFNTMMRDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGF-KISKSSI 860
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
++ + G+I + I+ MK P I M+++ + A+ + E
Sbjct: 861 LLMLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEE 920
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
AN K + ++SML+ ++ VY+ + SG + D+T +
Sbjct: 921 AN-------------FKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNT 967
Query: 555 LLVEASR 561
L++ R
Sbjct: 968 LIIMYCR 974
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 94/477 (19%), Positives = 179/477 (37%), Gaps = 77/477 (16%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
K Y ++ + GK G+ AL+++ M PD Y + +LG+ E
Sbjct: 400 KDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAA 459
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
L+ M D ++P L Y+A++ + + + F + +SG
Sbjct: 460 LMSEM---------------LDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGT 504
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
KP Y + +L VL+R + +A R+M G + S+Y +
Sbjct: 505 KPDNLAYSV--------MLDVLLRG----NETRKAWVLYRDMISDGHTPSHSLYELMILG 552
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS--IFQHMKDHCE 463
L R D + ++ L PLEI+ S + G D + + + + E
Sbjct: 553 LMKENRSDDVQKTIRDMEELCGMNPLEIS------SVLVKGECFDLAARQLKVAITNGYE 606
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGD------------GAPLK 511
T+ ++L YS + S+A EL E + ++SG L + GA L
Sbjct: 607 LENDTLLSILGSYSSSGRHSEAFELL-EFLKEHASGSKRLINEALIVLHCKVNNIGAAL- 664
Query: 512 PDEY---------------TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
DEY Y ++L + V+ + LSGC+ ++ ++
Sbjct: 665 -DEYLADPCVHGWCFGGSTMYETLLHCCVANEHYAEASQVFSELRLSGCEPSESVCKSMV 723
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-----YEKAVALINAMA 611
V + G E A+ + +A E F + I+++ ++KA +++ +
Sbjct: 724 VVYCKLG---FPETAYQVVNQA-ETKGFHFACSPMYTDIIEAYGKLKLWQKAESVVGNLR 779
Query: 612 YAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALC 668
+ + W L + + ++ + N + + TV ++++ LHALC
Sbjct: 780 QSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPSP---TVESINKLLHALC 833
>gi|255583688|ref|XP_002532598.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527686|gb|EEF29795.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 553
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 153/362 (42%), Gaps = 53/362 (14%)
Query: 173 KNWKFVR-----IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS 227
K W V + QS F E L L+ G +G++ A VL ++ + ++ S
Sbjct: 118 KKWHLVSQILEWVRTQSWWDFNEMDSLMLITAYGKQGNFSAAEKVLSYMNKMGYVPNVVS 177
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
+T L+ G+ R + A IF M + P Y + + KE ++
Sbjct: 178 ---HTALMEAYGRGARYNNAEAIFRRM-QSSGPKPSAVTYQIILKNFVEGNKFKEAEEVF 233
Query: 288 ERMRQ------KPSKRIKNM----HRK--NWDPV-----------LEPDLVVYNAVLNAC 324
E + KP +++ +M HRK N++ + V YN++++
Sbjct: 234 ETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQIFALMTQRGVPKSTVTYNSLMSF- 292
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAV 384
+K V ++ Q+++SGL+P +Y L L+ A+ + + +EA+A
Sbjct: 293 --ETNYKEVSKIYDQMQRSGLQPDVISYAL------------LINAYGKARREDEALAVF 338
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
M GV T Y L +G + A V + ++ R++ L ++T ++ + ++
Sbjct: 339 EEMLDAGVRPTHKAYNILLDAFAISGMVEQARTVFKSMRRDRYTPDL-CSYTTMLSAYVN 397
Query: 445 GGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET----TRANSSG 499
+ + F +K D EPN+ T A++K Y++ + K E +EE +AN +
Sbjct: 398 ASDMAGAENFFNRLKQDGLEPNVVTYGALIKGYAKTNNLDKMMEKYEEMQLRGVKANQTI 457
Query: 500 YT 501
+T
Sbjct: 458 FT 459
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/290 (18%), Positives = 117/290 (40%), Gaps = 57/290 (19%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY------------ 359
P++V + A++ A ++ +F++++ SG KPSA TY + ++++
Sbjct: 173 PNVVSHTALMEAYGRGARYNNAEAIFRRMQSSGPKPSAVTYQIILKNFVEGNKFKEAEEV 232
Query: 360 --------------RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
+ + +++ + G +A M QRGV + Y L
Sbjct: 233 FETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQIFALMTQRGVPKSTVTYNSLMSF 292
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEP 464
N +++ + ++++ +P I++ LI + D+ +++F+ M D P
Sbjct: 293 ETN---YKEVSKIYDQMQR-SGLQPDVISYALLINAYGKARREDEALAVFEEMLDAGVRP 348
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTR-----------------ANSSG-------Y 500
N +L ++ + M +A+ +F+ R N+S +
Sbjct: 349 THKAYNILLDAFAISGMVEQARTVFKSMRRDRYTPDLCSYTTMLSAYVNASDMAGAENFF 408
Query: 501 TFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
L DG L+P+ TY ++++ A + + Y+ M L G + +QT
Sbjct: 409 NRLKQDG--LEPNVVTYGALIKGYAKTNNLDKMMEKYEEMQLRGVKANQT 456
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 133/349 (38%), Gaps = 46/349 (13%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A+SVL ++ L + D + L+ G EA+ +FN M+ + PD+ +Y
Sbjct: 146 AISVLGKMFKLGIQPD---AITFNTLINGRCIEGEIKEAVGLFNEMVRRGH-QPDVISYS 201
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
+V L + G ++L+ +M +K K P+LV Y ++++
Sbjct: 202 TVINGLCKSGNTSMALQLLRKMEEKGCK---------------PNLVAYTTIIDSLCKDT 246
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
+ ++ G+ P TY ++ F G +NEA M
Sbjct: 247 LVNDAMDLLSEMVDRGIPPDVVTY------------STILHGFCSLGHLNEATILFNEMV 294
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
R V+ + L LC G +A V E + + ++P T+ L+ +
Sbjct: 295 GRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTK-KGAEPNAYTYNALMDGYCLNNQM 353
Query: 449 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
D+ + M D C P + + N ++ Y + +AK L E +
Sbjct: 354 DEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKE----------- 402
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
L PD TYS++++ + + ++K M SG D ++ LL
Sbjct: 403 --LTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLL 449
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L+ L + GRP EAL +F M L PD+ Y ++ L + G L E +KL++ M
Sbjct: 410 YSTLMQGLCQVGRPQEALNLFKEMCSS-GLLPDLMTYSTLLDGLCKHGHLDEALKLLKSM 468
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ +EPD+V+YN ++ + + + +F +L G++P+
Sbjct: 469 QESK---------------IEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIR 513
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
TY ++++ +EG +EA R ME G + + Y
Sbjct: 514 TY------------TIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSY 550
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 131/340 (38%), Gaps = 61/340 (17%)
Query: 194 LKLLKGLGDKGSWRQAMSVLDWVYGL------KDKRDLKSRFV----------YTKLLAI 237
L+LL+ + +KG ++ + L D DL S V Y+ +L
Sbjct: 217 LQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHG 276
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
G +EA +FN M+ N+ P+ + + L + G++ E + E M +K +
Sbjct: 277 FCSLGHLNEATILFNEMVGR-NVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGA-- 333
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
EP+ YNA+++ ++Q V + G P +Y + +
Sbjct: 334 -------------EPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILIN 380
Query: 358 SY--RRCL---------------------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
Y RR L L++ + G+ EA+ + M G++
Sbjct: 381 GYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLP 440
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEITFTGLIISSMDGGHIDDCI 452
Y L LC +G +A+ + +KS++ SK P + + LI G ++
Sbjct: 441 DLMTYSTLLDGLCKHGHLDEAL---KLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAK 497
Query: 453 SIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+F + D +P I T M+K + + +A ELF +
Sbjct: 498 ELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRK 537
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 128/298 (42%), Gaps = 35/298 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ GL + G W A W+ KR ++ + +T L+ K G+ EA ++N+M
Sbjct: 229 LVTGLCEIGRWGDA----AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
++ ++YPD+ Y S+ L GLL E ++ M + P+
Sbjct: 285 IQM-SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC---------------YPNE 328
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V+Y +++ S + + +F ++ + G+ + TY + ++ Y CL+
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGY--CLV---------- 376
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
G+ + A M R Y L LC NG+ + A+++ E ++ R +T
Sbjct: 377 GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK-REMDINIVT 435
Query: 435 FTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+T +I G ++D +F + +PN+ T M+ + R + +A LF++
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/466 (18%), Positives = 165/466 (35%), Gaps = 62/466 (13%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM--------LEDCNLYPDI 264
LD + R L S +T+LL+++ K R + +F M L CN+
Sbjct: 68 LDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI---- 123
Query: 265 AAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNAC 324
H V ++ +P R K EPDLV + ++LN
Sbjct: 124 -VMHCVCLS------------------SQPC-RASCFLGKMMKLGFEPDLVTFTSLLNGY 163
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAV 384
++ + +F Q+ G KP+ TY L+R + +N AV
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTY------------TTLIRCLCKNRHLNHAVELF 211
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
M G Y L LC GRW DA ++ + R +P ITFT LI + +
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK-RRIEPNVITFTALIDAFVK 270
Query: 445 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
G + + ++ M + P++ T +++ + +A+++F R
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC------ 324
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
P+E Y++++ + + E ++ M+ G + + L+ G
Sbjct: 325 -------YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 564 KCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWT 623
+ + + F+ + P + +L EKA+ + M I +T
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 624 ELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 669
+ + K+E + C+ + + V + + CR
Sbjct: 438 IIIQG---MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 85/220 (38%), Gaps = 31/220 (14%)
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILG 239
+M ++G E L+ G M + Y + K + + YT L+
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF---YEMSQKGVVANTITYTVLIQGYC 374
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
GRP A +FN M PDI Y+ + L G +++ + + E MR++
Sbjct: 375 LVGRPDVAQEVFNQMSSR-RAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE----- 428
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
++ ++V Y ++ + + F +F L G+KP+ TY
Sbjct: 429 ----------MDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITY------- 471
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
++ F G I+EA + + M++ G + SVY
Sbjct: 472 -----TTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
Length = 792
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/434 (18%), Positives = 158/434 (36%), Gaps = 51/434 (11%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY-- 217
VL+ M+ + +K R M + GL+ + + ++KGL W+ A+ +L+ V
Sbjct: 331 VLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDT 390
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
G+ D F Y L+ L K + HEA+ +++ M ++ + P I YHS+ + +
Sbjct: 391 GVPDV------FTYGCLIHWLCKHQKLHEAVNLWDKM-KEAGVKPSIVTYHSLLLGYCEK 443
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G + E +KL M K P+ V Y ++ + + + +
Sbjct: 444 GRMDEALKLYSEMPDKG---------------FPPNEVTYTTLMKGYIKKKAFDNAYALL 488
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
++R++G+ TY +L+ + ++ E ++ G V T
Sbjct: 489 NEMRQNGVSCGDYTY------------NILINGLYMVNRVCEVDEMLKRFLSEGFVPTTM 536
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y + G A + +++ + P +T+T I D + + +
Sbjct: 537 TYNSIINGFVKAGMMGSAFGMYRQMRK-KGITPNIVTYTSFIDGYCRTNCCDLAVKLLIY 595
Query: 458 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
+ +D +P+I NA + + + S+A L DG L PD
Sbjct: 596 VRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFL-----------VLLLKDG--LTPDVTV 642
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
Y+S + Y M D + L+ S+ G + ++
Sbjct: 643 YNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMM 702
Query: 577 EAGEIPHPLFFTEM 590
IP FT +
Sbjct: 703 ANHVIPDDKTFTAL 716
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 16/140 (11%)
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
+ Y + +R + +YT L+ K G AL +++ M+ + ++ PD + ++ L
Sbjct: 662 FYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMAN-HVIPDDKTFTALTHGL 720
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G + +L++ MR+ + P++V YN ++NACV + + F
Sbjct: 721 CRSGDIDGAKRLLDDMRRLD---------------VSPNIVTYNMLINACVRDGKLQEAF 765
Query: 335 WVFKQLRKSGLKPSAATYGL 354
+ ++ SG+ P TY +
Sbjct: 766 QLHDEMLSSGVVPDDTTYDI 785
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 143/364 (39%), Gaps = 79/364 (21%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G +A+R++ ++ D P++A Y+ + L ++G+ KE + ER
Sbjct: 231 CYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWER 290
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + N H +PD++ Y +++ S V+ ++ K+GL P
Sbjct: 291 M-------VANNH--------QPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDV 335
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEA--------VAAVRNMEQR----------G 391
Y L++ F G++ EA V+ +RN+ G
Sbjct: 336 VIY------------NSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGG 383
Query: 392 VVGTASVYYEL-----------------ACCLCNNGRWQDAMLVVEKIKSLRHSKPL-EI 433
+V A+ +EL LC G ++ ++E+ ++ K L E
Sbjct: 384 MVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEART--SGKELDEF 441
Query: 434 TFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
+++ +I G +DD + +++ + D +PN NA++ + + FS A ++ +
Sbjct: 442 SYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQM 501
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
+ S P TY++++ A ++ + M GC LD +
Sbjct: 502 AENDCS-------------PTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTY 548
Query: 553 AWLL 556
L+
Sbjct: 549 GSLI 552
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 131/321 (40%), Gaps = 42/321 (13%)
Query: 175 WKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKL 234
WKF M+ SG+ + +LKGL D G +A + W KD ++ +
Sbjct: 355 WKFWDSMSVSGIRNVTSYNI-MLKGLFDGGMVDKATDL--WELLEKDDSLSPDMVTFSTM 411
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYP---DIAAYHSVAVTLGQVGLLKELVKLIERMR 291
+ L + G +++L+I LE+ D +Y S+ L + G L + VKL E++
Sbjct: 412 IHGLCEKGFANKSLQI----LEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKIS 467
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
K P+ +YNA++N + ++ V+ Q+ ++ P+ T
Sbjct: 468 MDSFK---------------PNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTIT 512
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y L+ + K EA R M ++G + + Y L LC + +
Sbjct: 513 Y------------NTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKK 560
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMK--DHCEPNIGT 468
A+ + +I L ++ ++I + G +D+ + MK ++C PN+ T
Sbjct: 561 IDGALALWNQI--LDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVT 618
Query: 469 VNAMLKVYSRNDMFSKAKELF 489
N ++ + F KA L+
Sbjct: 619 YNTLMDGFYETGCFDKAASLW 639
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 57/248 (22%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQL-RKSGLKPSAATYGLAMESYRRCLLKVLV 368
++PD V YNA+L C + +++ V++QL R G P+ ATY + ++ C L +
Sbjct: 225 VQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGL--CKLGMFK 282
Query: 369 RA--FWE-----------------------EGKINEAVAAVRNMEQRGVVGTASVYYELA 403
A WE ++ A M + G+V +Y L
Sbjct: 283 EAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLL 342
Query: 404 CCLCNNGR----WQ--DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
C+ GR W+ D+M + +R+ I GL DGG +D +++
Sbjct: 343 KGFCHAGRVGEAWKFWDSM----SVSGIRNVTSYNIMLKGLF----DGGMVDKATDLWEL 394
Query: 458 MK--DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
++ D P++ T + M+ +K+ ++ EE A +SG DE+
Sbjct: 395 LEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEE---ARTSGKEL----------DEF 441
Query: 516 TYSSMLEA 523
+YSSM+
Sbjct: 442 SYSSMISG 449
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 84/255 (32%), Gaps = 59/255 (23%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ P+L YN +L + +F LR GL P TY L+
Sbjct: 155 IAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITY------------STLMS 202
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
F + +++ A+ + M V A Y L NG ++ AM V E++
Sbjct: 203 GFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVR----- 257
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
D G PN+ T N ML + MF +A +++
Sbjct: 258 --------------DPG---------------ASPNLATYNVMLDGLCKLGMFKEAGDVW 288
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
E N +PD TY +M+ + + VY M +G D
Sbjct: 289 ERMVANNH-------------QPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDV 335
Query: 550 TKHAWLLVEASRAGK 564
+ LL AG+
Sbjct: 336 VIYNSLLKGFCHAGR 350
>gi|115456295|ref|NP_001051748.1| Os03g0824100 [Oryza sativa Japonica Group]
gi|113550219|dbj|BAF13662.1| Os03g0824100, partial [Oryza sativa Japonica Group]
Length = 691
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 126/354 (35%), Gaps = 81/354 (22%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G+ GR +F M + PD A Y+ + G G KE+V+L +
Sbjct: 181 TYRVLLDLYGRQGRFDGVRELFREM--RTTVPPDTATYNVLFRVFGDGGFFKEVVELFQD 238
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +H + +EPD+ V+ AC + V + G+ P+A
Sbjct: 239 M----------LHSE-----VEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTA 283
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
Y LV A EA A M + G + T Y LA
Sbjct: 284 KAY------------TGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKG 331
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD--------- 460
G +Q+A + ++ + + + +F LI + G +DD + + M+
Sbjct: 332 GLFQEAEAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERS 391
Query: 461 -------HC--------------------EPNIGTVNAMLKVYSRNDMFSKAKELFEE-- 491
+C P+I ML +Y+RND ++ A +L EE
Sbjct: 392 LEGVLNAYCIAGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMK 451
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
T RA+S+ A + EY S W+ EYV L GC
Sbjct: 452 TNRASSTHQVI-----ASMIKGEYDDDS---------NWQMVEYVLDNSNLEGC 491
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 146/391 (37%), Gaps = 72/391 (18%)
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
L+ L MR PS P + PDL YN +L A + + + +
Sbjct: 55 LLGLFAEMRHDPS------------PSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLE 102
Query: 343 SGLKPSAATYGLAMESYRRC--LLKV---------------------LVRAFWEEGKINE 379
+G+ P A+Y ++++ L +V L+ A G E
Sbjct: 103 AGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAE 162
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGL 438
AVA +R M+ G TA+ Y L GR+ V E + +R + P + T+ L
Sbjct: 163 AVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDG---VRELFREMRTTVPPDTATYNVL 219
Query: 439 IISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
DGG + + +FQ M EP+I T ++ R + A+E+ +
Sbjct: 220 FRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLD------- 272
Query: 498 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 557
+++ +G + P Y+ ++EA A +E + M G + L
Sbjct: 273 ----YITTEG--MVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNAL-- 324
Query: 558 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHI 617
A+ K L + A EA F+ M A +Q + + ALI AY
Sbjct: 325 -ANAFAKGGLFQEA-----EA-------IFSRMTNNAAIQKDKDSFDALIE--AYCQGAQ 369
Query: 618 TERQWTELFESNEDRISRDK--LEKLLNALC 646
+ E + R + D+ LE +LNA C
Sbjct: 370 LDDAVKAYMEMRKSRFNPDERSLEGVLNAYC 400
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/445 (19%), Positives = 171/445 (38%), Gaps = 49/445 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
VY +L IL K A RI LM L P+ A+ V V+ + G L++ +K++
Sbjct: 248 VYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPE--AFGFVMVSYSRAGRLRDAMKVLT 305
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M++ +EP+L + N ++ V ++ K +++ G+ P+
Sbjct: 306 LMQKAG---------------VEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPN 350
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
TY L++ + ++++A+ + M +G YY + LC
Sbjct: 351 VVTYN------------CLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCR 398
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
+ R + +++K+++ P +T+ LI GH D+ + I Q K + +
Sbjct: 399 DKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKV 458
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
+A++ Y + KAKEL E F G PD TY+S+L+
Sbjct: 459 EYSAIVHAYCKEGKIQKAKELVSE---------MFSKG----CDPDVVTYTSVLDGFCRI 505
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
+ + + + + M C+ + + L R GK + E P+ + +
Sbjct: 506 GKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITY 565
Query: 588 TEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCN 647
+ ++ + +A ++ M F + L S + RD + N L
Sbjct: 566 SVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHS----LCRDGKPREANQLLK 621
Query: 648 -CNAASSEITVSNLSRALHALCRSE 671
C + V N + +H C+ +
Sbjct: 622 ECMNKGCAVNVVNFTTVIHGFCQKD 646
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 99/472 (20%), Positives = 183/472 (38%), Gaps = 91/472 (19%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
+ +++DRL + + + ++ L+ GLG G A + +
Sbjct: 448 TVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYE-- 505
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE--------------DC---- 258
+ D + VYT L+ K GR + +I+ M+ DC
Sbjct: 506 -KMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKA 564
Query: 259 ----------------NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
L PD+ +Y + L + G K+ KL M+++
Sbjct: 565 GEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQG-------- 616
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
L D YN V++ S + + + ++++ GL+P+ TYG ++
Sbjct: 617 -------LHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDG---- 665
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
L K+ +++EA + + V VY L GR +A L++E++
Sbjct: 666 LAKI--------DRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEEL 717
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT----VNAMLKVYS 477
+ P T+ L+ + + ID+ + FQ+MK+ C PN T VN + KV
Sbjct: 718 MQ-KGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRK 776
Query: 478 RNDMFSKAKELFEETTRANSSGYT-FLSG---DGAPLK--------------PDEYTYSS 519
N F +E+ ++ + N+ YT +SG G L+ PD Y++
Sbjct: 777 FNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNA 836
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
M+E + A++ +++ L GC++ +K +L++A C LE A
Sbjct: 837 MIEGLSNANKAMDAYILFEETRLKGCRI-YSKTCVVLLDALHKADC--LEQA 885
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/443 (20%), Positives = 174/443 (39%), Gaps = 76/443 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G G + +A S+L+ K K + S Y +L LG+ G+ EALRI M
Sbjct: 348 MIMGYGSVGKFNEAYSLLERQ---KRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK 404
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM------HRKNW 306
D P++ +Y+ + L + G L+ +K+ + M++ P+ N+ +
Sbjct: 405 MDAA--PNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRL 462
Query: 307 D-----------PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
D V PD V + ++++ + + +++++ SG P+A Y
Sbjct: 463 DEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVY--- 519
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+R F++ G+ + + M RG + C+ G +
Sbjct: 520 ---------TSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKG 570
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 474
+ E+IK+ + P +++ LI + GG D +F MK+ + N ++
Sbjct: 571 RALFEEIKA-QGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVID 629
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
+ ++ +KA +L EE L+P TY S+++ A
Sbjct: 630 GFCKSGKVNKAYQLLEEMKTKG-------------LQPTVVTYGSVIDGLA--------- 667
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA----GEIPHPLFFTEM 590
++D+ A++L E +++ L + SL++ G I E
Sbjct: 668 -----------KIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEE 716
Query: 591 LIQAIVQSNYEKAVALINAMAYA 613
L+Q + N L++A+ A
Sbjct: 717 LMQKGLTPNTYTWNCLLDALVKA 739
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 143/372 (38%), Gaps = 63/372 (16%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
++T L+ + + GR AL + + M + + D+ Y+ G+VG + K
Sbjct: 239 LFTTLICVFAREGRVDAALSLLDEMKSN-SFNADLVLYNVCIDCFGKVGKVDMAWKFFHE 297
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
++ + L PD V + +++ + + +F++L + P
Sbjct: 298 LKSQG---------------LVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCV 342
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
Y ++ + GK NEA + + +++G + + Y + CL
Sbjct: 343 YAY------------NTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRK 390
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 468
G+ ++A+ ++E +K + P ++ LI G ++ + + MK+ PNI T
Sbjct: 391 GKVEEALRILEAMK--MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIIT 448
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
VN M+ D KA+ L E + FL D PD T+ S+++
Sbjct: 449 VNIMI------DRLCKAQRLDEACS-------IFLGLDHKVCTPDSVTFCSLIDGLGRHG 495
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK---------------CH----LLE 569
+ +Y+ M SG + + L+ + G+ C LL
Sbjct: 496 KVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLN 555
Query: 570 HAFDSLLEAGEI 581
+ D + +AGEI
Sbjct: 556 NYMDCVFKAGEI 567
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 91/241 (37%), Gaps = 27/241 (11%)
Query: 325 VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAV 384
V S + + F V + +RK +P+ + Y L+ A + + + +
Sbjct: 178 VKSRKLREAFGVIETMRKFKFRPAYSAY------------TTLIGALSAAHEADPMLTLL 225
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD 444
R M++ G T ++ L C GR A+ +++++KS + L + + I
Sbjct: 226 RQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADL-VLYNVCIDCFGK 284
Query: 445 GGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
G +D F +K P+ T +M+ V + + +A ELFEE S
Sbjct: 285 VGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSV----- 339
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
P Y Y++M+ + ++ + + GC + +L R G
Sbjct: 340 --------PCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKG 391
Query: 564 K 564
K
Sbjct: 392 K 392
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 151/385 (39%), Gaps = 50/385 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L KAG+ ++A +F +L + P AY S+ L + +L M
Sbjct: 326 YGILIDGLAKAGKLNDARNLFQKLLHS-GVTPSTVAYTSLIHGLCMANSFDDARELFADM 384
Query: 291 RQK---PSKRIKN----------MHRKNWDPVLE-------PDLVVYNAVLNACVPSHQW 330
++ PS N M + D + + PD+V YN V++ S +
Sbjct: 385 NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRV 444
Query: 331 KGVFWVFKQLRKSGLKPSAATY-----GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
+ +F ++ + G P+ ++ GL +S + + GK++EA ++
Sbjct: 445 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSK--------IDQACQRGKLDEAFRLLK 496
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M G V Y L LC+ R DA ++E + R KP +T LI
Sbjct: 497 RMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK-RQCKPTVVTQNTLIHGLCKA 555
Query: 446 GHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
G I + + M + P++ T N ++ + R +A+EL +
Sbjct: 556 GRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG-------- 607
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
L P+ TY++++ A++ V+ M SGC + + L++ AG+
Sbjct: 608 -----LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQ 662
Query: 565 CHLLEHAFDSLLEAGEIP-HPLFFT 588
F ++ AG P H ++ T
Sbjct: 663 VDGGLKLFGEMVCAGISPDHVVYGT 687
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 90/484 (18%), Positives = 181/484 (37%), Gaps = 78/484 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFN--- 252
LL+G +G +A +L + D+ Y +L L KAGR EA+R+F
Sbjct: 218 LLEGFCSRGQVDKARELL---RAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRE 274
Query: 253 --LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PS------------ 295
+ P + Y+ V + L Q + E V++ E+M ++ P
Sbjct: 275 LPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLA 334
Query: 296 -----KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+N+ +K + P V Y ++++ ++ + +F + + G PS
Sbjct: 335 KAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPV 394
Query: 351 TYGLAME-SYRRCLLKV---LVRAFWEEG-------------------KINEAVAAVRNM 387
TY + ++ S +R +L+ L++ E+G ++ EA+ M
Sbjct: 395 TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 454
Query: 388 EQRGVVGTASVYYELACCLCNN---------GRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
E+ G + + LC G+ +A +++++ H P +T++ L
Sbjct: 455 ERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHV-PDVVTYSTL 513
Query: 439 IISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
I +DD + + M K C+P + T N ++ + +A+E+ + +
Sbjct: 514 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 573
Query: 498 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 557
S PD TY++++ A Q E + M G + + L+
Sbjct: 574 S-------------PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVS 620
Query: 558 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYA---P 614
+A + F + +G P+ +T +++ + + L M A P
Sbjct: 621 GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 680
Query: 615 FHIT 618
H+
Sbjct: 681 DHVV 684
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/426 (20%), Positives = 164/426 (38%), Gaps = 96/426 (22%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
++T ++ GR EA++IF+LM E + YPD+ Y+ + +L
Sbjct: 11 LLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLS------------- 55
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+++ ++ +K M + D PD + +L + + V ++R + P
Sbjct: 56 --KRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPY 113
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
AT ++ CL + RAF ++ E + V +S Y + LC
Sbjct: 114 FATSSFL--AHELCLRGSMERAF----QLLEIMP----------VANSSAYNIVVVALCK 157
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIG 467
R DA+ + + R PL + +++ MD G ID+ + +++ + EP +
Sbjct: 158 AARVDDALELARTMSEKR--IPLAAGSLDSVLVGLMDSGRIDEALQVYRENRR--EPCLV 213
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T+N +L+ + KA+EL + PDE +Y ++L+ A
Sbjct: 214 TLNVLLEGFCSRGQVDKARELLRAMPDEECA-------------PDEVSYCTVLDGLCKA 260
Query: 528 HQWEYFEYV-----------------------YKGMALSGCQLDQTKHA----------- 553
+ E E V Y + L CQ D+ A
Sbjct: 261 GRVE--EAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERN 318
Query: 554 -----W---LLVEA-SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
W +L++ ++AGK + + F LL +G P + +T ++ + ++++ A
Sbjct: 319 VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 378
Query: 605 ALINAM 610
L M
Sbjct: 379 ELFADM 384
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 116/571 (20%), Positives = 222/571 (38%), Gaps = 78/571 (13%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL+D LS+R+ T K V++M G +L GL G +A V+D +
Sbjct: 49 VLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMR-- 106
Query: 220 KDKRDLKSRFVYTKLLA-ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
R + F + LA L G A ++ +M + +AY+ V V L +
Sbjct: 107 --SRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMP-----VANSSAYNIVVVALCKAA 159
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ + ++L M +K RI P+ L ++VL + S + V++
Sbjct: 160 RVDDALELARTMSEK---RI---------PLAAGSL---DSVLVGLMDSGRIDEALQVYR 204
Query: 339 QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASV 398
+ R+ +P T L VL+ F G++++A +R M
Sbjct: 205 ENRR---EPCLVT------------LNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVS 249
Query: 399 YYELACCLCNNGRWQDAMLVV--EKIKSLRHSKPLEITFTG---LIISSMDGGHIDDCIS 453
Y + LC GR ++A+ + ++ S S + G +I+ ID+ +
Sbjct: 250 YCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQ 309
Query: 454 IFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
+F+ M + + P+ + ++ ++ + A+ LF++ SG T P
Sbjct: 310 MFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLH---SGVT----------P 356
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
Y+S++ A+ ++ ++ M GC + ++ + + G +LE A
Sbjct: 357 STVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRG---MLEEAC 413
Query: 573 D---SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF--- 626
D ++E G +P + + ++ S E+A+ L N M R +
Sbjct: 414 DLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGL 473
Query: 627 --ESNEDR-ISRDKLE---KLLNALCNCNAASSEITVSNLSRALHALCRSEKER----DL 676
+S D+ R KL+ +LL + + +T S L L ++ R + R D+
Sbjct: 474 CQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 533
Query: 677 SSSAHFGSQAIDISPLHGIHEAFDVKETENV 707
+ + +HG+ +A +KE V
Sbjct: 534 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 564
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 97/258 (37%), Gaps = 44/258 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G ++A VLD + D+ + Y L+ +AG+ A + + M+
Sbjct: 548 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT---YNTLVHGHCRAGQTERARELLSDMV 604
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
L P++ Y ++ L + L E + +M+ P+L
Sbjct: 605 AR-GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA---------------PNLF 648
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL-------------AMESYRRC 362
Y A++ + Q G +F ++ +G+ P YG A+E R
Sbjct: 649 TYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREG 708
Query: 363 ------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
+ + V E GK+ A+ VR+M + G + L LC +G
Sbjct: 709 RESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSG 768
Query: 411 RWQDAMLVVEKIKSLRHS 428
+ +A V+E+I L +
Sbjct: 769 QGGEARAVLEEIMDLAYG 786
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/549 (16%), Positives = 216/549 (39%), Gaps = 66/549 (12%)
Query: 127 VLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSG 185
V+ DV G + + W ++R + + L+ L E + WK ++ M ++
Sbjct: 63 VMKTDV--GVNVKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNP 120
Query: 186 L-MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
+ + T ++ +++ LG+ RQA+++ Y +K ++ Y ++ +L G+
Sbjct: 121 ICVVTPTELSDVVRMLGNAKMVRQAITIF---YQIKTRKCQPIAQAYNSMIIMLMHEGQY 177
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKRIKNM 301
+ +++N M + + +PD Y ++ ++G ++L+ M++ +P+ +I M
Sbjct: 178 EKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTM 237
Query: 302 -----------------HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+ PD+ Y ++ + + + F ++++ G
Sbjct: 238 LIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREG 297
Query: 345 LKPS-------------AATYGLAMESYR-----RCLLKV-----LVRAFWE-EGKINEA 380
+P A AM+ ++ RC+ V +++A +E + + +E
Sbjct: 298 CRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEV 357
Query: 381 VAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 440
+ M++ G+ ++ Y L C R + AM+++E++ + P + LI
Sbjct: 358 PSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDE-KGFPPCPAAYCSLID 416
Query: 441 SSMDGGHIDDCISIFQHMKDHCEPNIGTVNA-MLKVYSRNDMFSKAKELFEETTRANSSG 499
+ D +FQ +K++C + V A M+K + A +F+E + +
Sbjct: 417 ALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCA- 475
Query: 500 YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEA 559
PD Y Y++++ A + + M GC D + +L
Sbjct: 476 ------------PDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGL 523
Query: 560 SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITE 619
++ G H ++ ++ P + + +L +E+A L+ M F
Sbjct: 524 AKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDL 583
Query: 620 RQWTELFES 628
++ + E+
Sbjct: 584 ITYSSILEA 592
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 160/389 (41%), Gaps = 41/389 (10%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLM------LEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
Y + IL A ++A RI M L+DC+++ + + +V V G+ L
Sbjct: 13 YCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVCVP--GFGVFDALF 70
Query: 285 KLI--ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
++ E M ++ + M R + P N +L+ + G+ FK +
Sbjct: 71 SVLIEEDMFEEALQCFSKMKRCR----VFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIG 126
Query: 343 SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
+G KP+ TY + ++ C+ K EG I A M+ RG++ Y +
Sbjct: 127 AGSKPTVFTYNIMID----CMCK--------EGDIEAASGLFEEMKFRGLIPDTVTYNSM 174
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH- 461
GR D + E++KS+ +P IT+ LI G + + F+ MK
Sbjct: 175 IDGYGKVGRLDDTVYFFEEMKSMS-CEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSG 233
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
+PN+ + + ++ + + DM +A + + + R L P+E+TY+S++
Sbjct: 234 LKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLG-------------LVPNEHTYTSLV 280
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
+A + M+ G + + + L+ + E F ++ AG I
Sbjct: 281 DAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVI 340
Query: 582 PHPLFFTEMLIQAIVQSNYEKAVALINAM 610
P+ +T ++ + N ++A+ L++ M
Sbjct: 341 PNLASYTALIHGFVKAKNMDRALELLDEM 369
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 173/429 (40%), Gaps = 59/429 (13%)
Query: 153 SEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSV 212
S+ +L++ S+ + + ++ + + G T L+KGL KG QA+
Sbjct: 94 SDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHF 153
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY-PDIAAYHSVA 271
D V D S Y L+ L K GR AL++ L D L P+ Y+ +
Sbjct: 154 HDKVVAQGFHLDQVS---YGTLINGLCKVGRITAALQL--LKRVDGKLVQPNAVMYNMII 208
Query: 272 VTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWK 331
+ + L+ + L +M +KRI PD+ YNA+++ +
Sbjct: 209 DNMCKAKLVNDAFDLYSQMV---AKRIC------------PDVFTYNALISGFSAVSKLN 253
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMESY--------RRCLLKVLVR-------------- 369
+F +++K + P+ T+ + ++ + + +L ++++
Sbjct: 254 YAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLM 313
Query: 370 -AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
+ K+N+A +M GV+ +Y + C +A+ + E+++ R
Sbjct: 314 DGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRC-RKI 372
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKE 487
P +T++ LI G I + + M D +P NI T +++L +N KA
Sbjct: 373 IPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIA 432
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
L T L G ++PD YTY+ +++ + + E + V++ + + G L
Sbjct: 433 LL-----------TNLKDQG--IRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNL 479
Query: 548 DQTKHAWLL 556
D + ++
Sbjct: 480 DVYAYTVMI 488
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 129/307 (42%), Gaps = 44/307 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ G +G A VL + K D+K V Y L+ + ++A IF+ M
Sbjct: 277 LVDGFCKEGKVNDAKVVL----AIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSM 332
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ ++ Y ++ ++ ++ E + L E MR + + P++
Sbjct: 333 ASG-GVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRK---------------IIPNV 376
Query: 315 VVYNAVLNACVPSHQWKGVFWVFK---QLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
V Y+++++ + +F+ K ++ G P+ TY ++ A
Sbjct: 377 VTYSSLIDGLC---KLGRIFYALKLVDEMHDRGQPPNIVTYSSILD------------AL 421
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ +++A+A + N++ +G+ Y L LC +GR +DA V E + L L
Sbjct: 422 CKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDL--LVKGYNL 479
Query: 432 EI-TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN-AMLKVYSRNDMFSKAKEL 488
++ +T +I D G D +++ M+D+ C PN T +L ++ +++ + K L
Sbjct: 480 DVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLL 539
Query: 489 FEETTRA 495
E R
Sbjct: 540 REMIVRG 546
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/405 (20%), Positives = 160/405 (39%), Gaps = 58/405 (14%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R ++T ++ L KA R EA +F M E C PD AY+++ L + G +E +K++
Sbjct: 225 RALHTAMVRTLLKAKRVKEAREVFGQM-EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ M K P V Y ++N+ + + +F+ + SG +P
Sbjct: 284 DNMLAKACV---------------PTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
++ Y L+ F + G++ EA + M + G + + LC
Sbjct: 329 NSVIY------------TSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
+G ++ A E++ KP +T+T +I G + + I + M H C P+
Sbjct: 377 KSGNFEQAAKSFEEMMR-GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDS 435
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T +L + + +A +L +E + +SS P+ YSS+++
Sbjct: 436 VTYICLLDGFCKLGRLDEAAQLLDELDKCSSS-------------PNLQLYSSLVKGLCD 482
Query: 527 AHQWE-YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
E + +++ + LD ++V + G+ F ++ G P
Sbjct: 483 GGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDAT 542
Query: 586 FFTEMLIQAIVQS---NYEKAVALI----------NAMAYAPFHI 617
+ +LI + +S E+A AL+ +A+ Y P I
Sbjct: 543 TYN-ILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCI 586
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 136/364 (37%), Gaps = 42/364 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + L+ + R +A+ F +M PD+ + + L + G
Sbjct: 155 FSFNILIRSFARTRRADDAVTCFEIMKRK-RCKPDLHTFLILVDCLCKAG---------- 203
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +K + M + P PD ++ A++ + + + K VF Q+ K G P
Sbjct: 204 -MDEKAFEVFHEMMAMGFVP---PDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
A Y ++ + G EA+ + NM + V T Y L LC
Sbjct: 260 AIAY------------NTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCK 307
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIG 467
G + A + ++ + +P + +T LI G + + S+F M + P++
Sbjct: 308 AGTLERAEELF-RVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVI 366
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T M+ ++ F +A + FEE R KP+ TY+++++ +
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGC-------------KPNVVTYTTIIQGLSKI 413
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
+ + KGM GC D + LL + G+ D L + P+ +
Sbjct: 414 GRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLY 473
Query: 588 TEML 591
+ ++
Sbjct: 474 SSLV 477
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/292 (18%), Positives = 118/292 (40%), Gaps = 26/292 (8%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
D+ YN ++N V + + + +++ K+G+ P+ ++ +L+R+F
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSF------------NILIRSFA 165
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
+ ++AV M+++ + L CLC G + A V ++ ++ P
Sbjct: 166 RTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDR 225
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
T ++ + + + + +F M K P+ N M+ ++ +A ++ +
Sbjct: 226 ALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN 285
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
P E TY ++ + A E E +++ MA SG + +
Sbjct: 286 ML-------------AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVI 332
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
+ L+ +++G+ FD ++EAG P + T M+ N+E+A
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/460 (20%), Positives = 164/460 (35%), Gaps = 98/460 (21%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL G++ QA + + K ++ + YT ++ L K GR A RI M+
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVT---YTTIIQGLSKIGRVANAFRIMKGMI 427
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR--------QKPSKRIKNM------ 301
+PD Y + ++G L E +L++ + Q S +K +
Sbjct: 428 AH-GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSV 486
Query: 302 -------------HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+N DP L ++V + + +F+++ G KP
Sbjct: 487 ENTLDDLFEQSKAAAENLDPGLCCSIIV------GLCKTGRLDEACRIFQRMVSEGCKPD 540
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
A TY + L+ L R+ E ++ A A + ++E G + A Y L LC
Sbjct: 541 ATTYNI--------LINGLCRS--RENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCK 590
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
G A+ ++E+ S R + +T L G +D +S+FQ M + P+
Sbjct: 591 IGEVDRAVKMLEEASS-RGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAA 649
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
++ + A + F+E G KP TY+++++A A
Sbjct: 650 AYCCIINGLIKGKKLEDACKFFDEMI-------------GKGQKPTVATYTALVQALCHA 696
Query: 528 HQWEYFEYVYKGMALSG----------------CQLDQTKHAWLLVE------------- 558
+ + ++GM G C+ + A L E
Sbjct: 697 GNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVT 756
Query: 559 -AS------RAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
AS R+GK + + G PH FT +L
Sbjct: 757 SASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAIL 796
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 120/325 (36%), Gaps = 41/325 (12%)
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRI 250
G ++ GL G +A + + K D + Y L+ L ++ R + R
Sbjct: 507 GLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATT---YNILINGLCRS-RENRVERA 562
Query: 251 FNLM--LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR----------------- 291
F L+ LE PD Y + + L ++G + VK++E
Sbjct: 563 FALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTG 622
Query: 292 ---QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
Q R ++ ++ PD Y ++N + + + F ++ G KP+
Sbjct: 623 LCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPT 682
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG-VVGTASVYYELACCLC 407
ATY LV+A G ++EA M RG +VG+ +Y L C
Sbjct: 683 VATY------------TALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFC 730
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
+ A+ + E + S R + P +T L + G + + Q M P+
Sbjct: 731 KALKVDAALKLFEDMIS-RGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHA 789
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEE 491
T A+L ++D K +L +E
Sbjct: 790 ATFTAILDGLRKSDESGKLLKLVQE 814
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 150/373 (40%), Gaps = 60/373 (16%)
Query: 202 DKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY 261
++G +A+ + D + G + D+ + Y L+ L K G A+R+ M++ N
Sbjct: 110 NRGKIGEALHLFDKMIGEGFRPDVVT---YGTLINGLCKVGNTSAAIRLLGSMVQK-NCQ 165
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P++ AY+++ +L + + E L M K + PD+ YN+++
Sbjct: 166 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG---------------ISPDIFTYNSLI 210
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
+A +WK V + ++ S + P ++ +V A +EGK+ EA
Sbjct: 211 HALCNLCEWKHVATLLNEMVDSKIMPDVVSF------------NTVVDALCKEGKVTEAH 258
Query: 382 AAVRNMEQR-GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLII 440
V M QR G + Y L C R AM + ++ + P +T++ LI
Sbjct: 259 DVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM-CRQELIPDTVTYSTLIH 317
Query: 441 SSMDGGHIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN--- 496
+ D I++F M + PN+ T +L +N ++A L + +N
Sbjct: 318 GLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDP 377
Query: 497 -------------SSG--------YTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
+G ++ LS G L+PD +TYS M+ +
Sbjct: 378 DIQVNNIAIDGMCRAGELEAARDLFSNLSSKG--LQPDVWTYSIMINGLCRRGLLDEASK 435
Query: 536 VYKGMALSGCQLD 548
+++ M +GC L+
Sbjct: 436 LFREMDENGCTLN 448
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 130/322 (40%), Gaps = 58/322 (18%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A SVL + L + ++ + + L + GK G E L +F+ M+ + P++ Y
Sbjct: 113 AFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIG---EVLHLFDKMIGE-GFQPNVVTYG 168
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L +VG ++L+ M Q +PD+VVY +++++
Sbjct: 169 TLINGLCKVGSTSAAIRLLRSMEQGNC---------------QPDVVVYTSIIDSLCKDR 213
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
Q F +F ++ G+ PS TY L+ A + A + M
Sbjct: 214 QVTQAFNLFSEMIHQGISPSIFTY------------NSLIHALCNLCEWKHVTALLNEMV 261
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG--- 445
++ ++ + LC G+ +A VV+ + R +P +T+ L MDG
Sbjct: 262 NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIK-RGVEPNVVTYNAL----MDGHCL 316
Query: 446 -GHIDDCISIFQHMKDHCE---PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
+D+ + +F M C+ P++ + + ++ Y + KA LFEE R
Sbjct: 317 RSEMDEAVKVFDTMV--CKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE----- 369
Query: 502 FLSGDGAPLKPDEYTYSSMLEA 523
L P+ TYS+++
Sbjct: 370 --------LIPNTVTYSTLMHG 383
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/342 (19%), Positives = 148/342 (43%), Gaps = 39/342 (11%)
Query: 161 LVDRLS-EREMTAKNWKFVRIMNQ--SGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
++D L +R++T F +++Q S +FT ++ L L + W+ ++L+
Sbjct: 205 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCE---WKHVTALLNE-- 259
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ + + + + +++ ++ L K G+ EA + ++M++ + P++ Y+++
Sbjct: 260 -MVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKR-GVEPNVVTYNALMDGHCLR 317
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
+ E VK+ + M K PD+V Y+ ++N + + ++F
Sbjct: 318 SEMDEAVKVFDTMVCKG---------------FAPDVVSYSTLINGYCKIQRIEKAMYLF 362
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
+++ + L P+ TY L+ G++ +A+A M RG +
Sbjct: 363 EEMCRKELIPNTVTY------------STLMHGLCHVGRLQDAIALFHEMVTRGQIPDFV 410
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y L LC N R +A+ +++ I+ ++I +T +I G ++ +F +
Sbjct: 411 SYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQI-YTIVIDGMCRAGELEAARDLFSN 469
Query: 458 MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
+ PN+ T M+ + + ++A +LF E R S
Sbjct: 470 LSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYS 511
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/372 (18%), Positives = 132/372 (35%), Gaps = 63/372 (16%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ P++ N ++N+ + F V ++ K G +P+ AT+ L+R
Sbjct: 90 IPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATF------------NTLIR 137
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
EGKI E + M G Y L LC G A I+ LR
Sbjct: 138 GLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAA------IRLLR--- 188
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
SM+ G+ C+P++ +++ ++ ++A LF
Sbjct: 189 ------------SMEQGN--------------CQPDVVVYTSIIDSLCKDRQVTQAFNLF 222
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
E S P +TY+S++ A +W++ + M S +
Sbjct: 223 SEMIHQGIS-------------PSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNV 269
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
+ ++ + GK D +++ G P+ + + ++ ++S ++AV + +
Sbjct: 270 VIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDT 329
Query: 610 MAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 669
M F ++ L +K L +C + +T S L +H LC
Sbjct: 330 MVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL---MHGLCH 386
Query: 670 SEKERDLSSSAH 681
+ +D + H
Sbjct: 387 VGRLQDAIALFH 398
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 142/352 (40%), Gaps = 56/352 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T +++ L K R EA I M P A+Y++V L ++E+ +++ M
Sbjct: 200 HTTIISALCKLDRLDEARGILAEMT------PVGASYNAVVHALCGQFRMREVFLVVDEM 253
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+HR L PD V Y +++ A + + + + ++ G P+
Sbjct: 254 ----------VHRG-----LRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQ 298
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
T+ VLV+ F+++GK+++A+ M G + Y L LC+ G
Sbjct: 299 TF------------TVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIG 346
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTV 469
+ A+ V + P T++ LI G +D +SI+ M + C+PN+
Sbjct: 347 DLKRALFVFSCMGK-SDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVY 405
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
M+ V + MF +A+ L ++ + N P+ T+++++ + +
Sbjct: 406 TNMVDVLCKKVMFDQAENLIDKMSLENC-------------PPNTLTFNTLIRSLCDLGR 452
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC--------HLLEHAFD 573
V+ GM GC + + LL R G C +L H F+
Sbjct: 453 AGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFE 504
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/342 (19%), Positives = 145/342 (42%), Gaps = 46/342 (13%)
Query: 296 KRIKNMHRKNWD-PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ +K +R D P + VYN +L+A + + V V+ +RK+G++P+ TY L
Sbjct: 108 RALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNL 167
Query: 355 AMESY---------RRCLLKV--------------LVRAFWEEGKINEAVAAVRNMEQRG 391
+++ RR L ++ ++ A + +++EA + M G
Sbjct: 168 LIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVG 227
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
A V+ LC R ++ LVV+++ R +P + +T ++ + +
Sbjct: 228 ASYNAVVHA-----LCGQFRMREVFLVVDEMVH-RGLRPDTVAYTSIVGAFCKARELRMA 281
Query: 452 ISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSG-YTFLSGDGAP 509
+I M + C PN+ T ++K + F++ ++ G + ++ +G
Sbjct: 282 CAILARMVTEGCVPNVQTFTVLVKGF------------FDDGKVHDALGMWNWMVAEG-- 327
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
P +Y+ ++ + +V+ M S C D ++ L+ S+AG +
Sbjct: 328 WAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAM 387
Query: 570 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
++ + AG P+ + +T M+ + +++A LI+ M+
Sbjct: 388 SIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMS 429
>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 115/271 (42%), Gaps = 33/271 (12%)
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEA 247
F E ++KLL G + +++ L+ L +K + TKL+ +A
Sbjct: 66 FRETHLMKLLNRSCKAGKFNESLYFLEC---LVNKGYTPDVILCTKLIKGFFNFKNIEKA 122
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWD 307
R+ ++ + + PD+ AY++V +V ++ +++ RM+ +
Sbjct: 123 SRVMEIL--ESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARG------------- 167
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
PD+V YN ++ + + V QL P+ TY +L
Sbjct: 168 --FLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITY------------TIL 213
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
+ A EG INEA+ + M RG++ Y + +C G W + +V ++ S R
Sbjct: 214 IEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFS-RG 272
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
+P ++T++ LI S G ID+ IS+ + M
Sbjct: 273 CEPNKVTYSILISSLCRFGRIDEAISVLKVM 303
Score = 46.6 bits (109), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 87/230 (37%), Gaps = 39/230 (16%)
Query: 219 LKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVG 278
+K + L Y ++ L + AL++ + +L D N P + Y + G
Sbjct: 163 MKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLD-NCMPTVITYTILIEATIVEG 221
Query: 279 LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK 338
+ E +KL+E M + L PD+ YNA++ W +
Sbjct: 222 GINEAMKLLEEMLARG---------------LLPDMYTYNAIIRGMCKEGMWDEGEKLVA 266
Query: 339 QLRKSGLKPSAATYGLAMESYRR--------CLLKV---------------LVRAFWEEG 375
++ G +P+ TY + + S R +LKV L+ A +EG
Sbjct: 267 EMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEG 326
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+++ A+ + M G + Y + LC NG A+ + K++ +
Sbjct: 327 RLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGM 376
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/444 (19%), Positives = 166/444 (37%), Gaps = 52/444 (11%)
Query: 124 LNWVLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMN 182
LN +++ +G F +V KR ++ L+ L + K F +
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLL 156
Query: 183 QSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAG 242
G+ F + L+ G+ G R A+ ++ + G K +++ +Y ++ L K
Sbjct: 157 AQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVE---MYNTIIDALCKYQ 213
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM------------ 290
EA +F+ M + D+ Y ++ LKE + L+ M
Sbjct: 214 LVSEAYGLFSEMTAK-GISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTY 272
Query: 291 --------RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
++ K KN+ ++PD++ Y+ +++ ++ K VF +
Sbjct: 273 NILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSL 332
Query: 343 SGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL 402
G+ P +Y +L+ F + ++EA+ + M Q+ +V Y L
Sbjct: 333 MGVTPDVHSY------------TILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH- 461
LC +GR ++++++ R IT+ LI GH+D I++F MKD
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRD-RGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQG 439
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
P T +L + A+E F++ + GY D Y Y+ M+
Sbjct: 440 IRPCSFTFTILLDGLCKGGRLKDAQEAFQDLL---TKGYHL----------DVYKYNVMI 486
Query: 522 EASATAHQWEYFEYVYKGMALSGC 545
E + M +GC
Sbjct: 487 NGHCKQGLLEEALTMLSKMEENGC 510
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 105/283 (37%), Gaps = 62/283 (21%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
++PDL+ N ++N Q F V ++ K G +P T+ L++
Sbjct: 90 IQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITF------------TTLIK 137
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+G++N+A+ + +G+ Y L +C G + A+ +V KI R +K
Sbjct: 138 GLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDG-RLTK 196
Query: 430 P-LE----------------------------------ITFTGLIISSMDGGHIDDCISI 454
P +E +T+T LI + + I +
Sbjct: 197 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGL 256
Query: 455 FQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 513
M PN+ T N ++ + +AK + +A +KPD
Sbjct: 257 LNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKA-------------CVKPD 303
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
TYS++++ ++ + ++V+ M+L G D + L+
Sbjct: 304 VITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILI 346
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/408 (17%), Positives = 156/408 (38%), Gaps = 83/408 (20%)
Query: 127 VLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSG 185
V+ DV G + + W +KR ++ + L+ L E + WK ++ M +S
Sbjct: 96 VMKTDV--GVNVKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSP 153
Query: 186 L-MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
+ + T ++ ++++ LG+ +A+++ Y +K ++ + Y ++ +L G+
Sbjct: 154 ICVVTPMELSQVIRMLGNAKMIGKAITIF---YQIKARKCQPTAQAYNSMIIMLIHEGQY 210
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
+ ++N M + + PD Y ++ ++G ++L+ M++
Sbjct: 211 EKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENG---------- 260
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL 364
++P +Y +++ G +F+++R +P TY
Sbjct: 261 -----MQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTY------------ 303
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
L+R + G+I+EA M++ G
Sbjct: 304 TELIRGLGKAGRIDEAYHFYHEMQREG--------------------------------- 330
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFS 483
KP + +I G +DD + +F+ M HC PN+ T N ++K
Sbjct: 331 ---CKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKA-------- 379
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
LFE +R + F G+ + P +TYS +++ ++ E
Sbjct: 380 ----LFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIE 423
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/402 (19%), Positives = 155/402 (38%), Gaps = 46/402 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+YT ++++ K H AL +F M C PD+ Y + LG+ G + E
Sbjct: 267 IYTMIISLFFKLDNVHGALSLFEEMRYMYCR--PDVFTYTELIRGLGKAGRIDEAYHFYH 324
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M+++ K PD VV N ++N + + +F+++ S P+
Sbjct: 325 EMQREGCK---------------PDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPN 369
Query: 349 AATYGLAMESYRRCLLKVLVRAFWE-EGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
TY +++A +E + +++E + M+ G+ + Y L C
Sbjct: 370 VVTY------------NTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFC 417
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIG 467
R + AM+++E++ + P + LI + D +FQ +K++C +
Sbjct: 418 KTNRIEKAMMLLEEMDE-KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSA 476
Query: 468 TVNA-MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
V A M+K + A LF+E ++ + P+ Y Y++++ A
Sbjct: 477 RVYAVMIKHLGKAGRLDDAINLFDEMSKLGCT-------------PNVYAYNALMSGLAR 523
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
A + + M GC D + +L ++ G H ++ + P +
Sbjct: 524 ACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVS 583
Query: 587 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
+ +L +E+A L+ M F ++ + E+
Sbjct: 584 YNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEA 625
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 99/236 (41%), Gaps = 15/236 (6%)
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
L ++R I +A+ ++ R TA Y + L + G+++ + ++
Sbjct: 162 LSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMS 221
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMF 482
+ H +P +T++ LI + G D I + MK++ +P ++ ++ + D
Sbjct: 222 NEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNV 281
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
A LFEE Y + +PD +TY+ ++ A + + + Y M
Sbjct: 282 HGALSLFEEMR------YMY-------CRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQR 328
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
GC+ D ++ +AG+ F+ + + IP+ + + +I+A+ +S
Sbjct: 329 EGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNT-IIKALFES 383
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 86/219 (39%), Gaps = 24/219 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 411 ILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQ---EL 467
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+ S VY ++ LGKAGR +A+ +F+ M P++ AY+++ L + +
Sbjct: 468 KENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEM-SKLGCTPNVYAYNALMSGLARACM 526
Query: 280 LKELVKLIERMRQKPS--------------------KRIKNMHRKNWDPVLEPDLVVYNA 319
L E + + +M++ R M + ++PD V YN
Sbjct: 527 LDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNT 586
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
VL+A + ++ + K++ G + TY +E+
Sbjct: 587 VLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEA 625
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/442 (20%), Positives = 157/442 (35%), Gaps = 102/442 (23%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ GL KG +A ++D + K S F + L+ G +A L +
Sbjct: 274 VINGLARKGELEKAAQLVDRMRMSKKA----SAFTFNPLITGYFARGSVEKA-GALQLEM 328
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E+ + P + Y+++ + + G ++ + R+K + + L PDL+
Sbjct: 329 ENEGIVPTVVTYNTIIHGMFRSGNVE-------------AARMKFVEMRAMG--LLPDLI 373
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-------------- 361
YN+++N + K W+F L+++GL PS TY + ++ Y R
Sbjct: 374 TYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEM 433
Query: 362 ----CLLKV-----------------LVRAFWEE-----------------------GKI 377
C V +VR F++E G
Sbjct: 434 VEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGST 493
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
+EA M RG+ Y LC +G +DA ++ K+ S +P IT+T
Sbjct: 494 SEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVS-DGLQPDCITYTC 552
Query: 438 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA----KELFEET 492
LI + + G + + IF M P+ T + Y R A +++ EE
Sbjct: 553 LIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEG 612
Query: 493 TRANSSGYTFLSGDGA------------------PLKPDEYTYSSMLEASATAHQWEYFE 534
R N Y L L P++YTY+ +++ + WE
Sbjct: 613 VRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAI 672
Query: 535 YVYKGMALSGCQLDQTKHAWLL 556
+Y M G D H L
Sbjct: 673 RLYSEMHQHGIHPDHCTHNALF 694
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 125/318 (39%), Gaps = 39/318 (12%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N VL A +W + V+ ++ + G++PS TY L+ +F+ EG++
Sbjct: 200 NLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTY------------NTLLDSFFREGRV 247
Query: 378 NEAVAAVRNMEQR--GVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
++A +R ME R G + + Y + L G + A +V++++ + K TF
Sbjct: 248 DQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK--KASAFTF 305
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE--- 491
LI G ++ ++ M++ P + T N ++ R+ A+ F E
Sbjct: 306 NPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRA 365
Query: 492 --------TTRANSSGYT---------FLSGD--GAPLKPDEYTYSSMLEASATAHQWEY 532
T + +GY +L GD A L P TY+ +L+ E
Sbjct: 366 MGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEE 425
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 592
+ M GCQ D + + L+ + + ++ FD +L G P + +
Sbjct: 426 ARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRIS 485
Query: 593 QAIVQSNYEKAVALINAM 610
++ + +A L M
Sbjct: 486 AELILGSTSEAFQLTEVM 503
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 102/247 (41%), Gaps = 32/247 (12%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P I Y+++ + + G + + KL+ M +P + P V YN V+
Sbjct: 229 PSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCL-------------PSDVTYNVVI 275
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
N + + + ++R S K SA T+ L+ ++ G + +A
Sbjct: 276 NGLARKGELEKAAQLVDRMRMSK-KASAFTF------------NPLITGYFARGSVEKAG 322
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
A ME G+V T Y + + +G + A + +++++ P IT+ LI
Sbjct: 323 ALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAM-GLLPDLITYNSLING 381
Query: 442 SMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAK----ELFEETTRAN 496
G++ + + +F +K P++ T N +L Y R +A+ E+ E+ + +
Sbjct: 382 YCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPD 441
Query: 497 SSGYTFL 503
S YT L
Sbjct: 442 VSTYTIL 448
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 130/322 (40%), Gaps = 58/322 (18%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A SVL + L + ++ + + L + GK G E L +F+ M+ + P++ Y
Sbjct: 122 AFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIG---EVLHLFDKMIGE-GFQPNVVTYG 177
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L +VG ++L+ M Q +PD+VVY +++++
Sbjct: 178 TLINGLCKVGSTSAAIRLLRSMEQGNC---------------QPDVVVYTSIIDSLCKDR 222
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
Q F +F ++ G+ PS TY L+ A + A + M
Sbjct: 223 QVTQAFNLFSEMIHQGISPSIFTY------------NSLIHALCNLCEWKHVTALLNEMV 270
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG--- 445
++ ++ + LC G+ +A VV+ + R +P +T+ L MDG
Sbjct: 271 NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIK-RGVEPNVVTYNAL----MDGHCL 325
Query: 446 -GHIDDCISIFQHMKDHCE---PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
+D+ + +F M C+ P++ + + ++ Y + KA LFEE R
Sbjct: 326 RSEMDEAVKVFDTMV--CKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE----- 378
Query: 502 FLSGDGAPLKPDEYTYSSMLEA 523
L P+ TYS+++
Sbjct: 379 --------LIPNTVTYSTLMHG 392
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/348 (18%), Positives = 146/348 (41%), Gaps = 41/348 (11%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
++D L + + + M G+ +FT ++ L L + W+ ++L+
Sbjct: 214 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCE---WKHVTALLNE-- 268
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
+ + + + + +++ ++ L K G+ EA + ++M++ + P++ Y+++
Sbjct: 269 -MVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKR-GVEPNVVTYNALMDGHCLR 326
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
+ E VK+ + M K PD+V Y+ ++N + + ++F
Sbjct: 327 SEMDEAVKVFDTMVCKG---------------FAPDVVSYSTLINGYCKIQRIEKAMYLF 371
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
+++ + L P+ TY L+ G++ +A+A M RG +
Sbjct: 372 EEMCRKELIPNTVTY------------STLMHGLCHVGRLQDAIALFHEMVTRGQIPDFV 419
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y L LC N R +A+ +++ I+ ++I +T +I G ++ +F +
Sbjct: 420 SYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQI-YTIVIDGMCRAGELEAARDLFSN 478
Query: 458 MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS--GYTF 502
+ PN+ T M+ + + ++A +LF E R S G T+
Sbjct: 479 LSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTY 526
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/372 (18%), Positives = 132/372 (35%), Gaps = 63/372 (16%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ P++ N ++N+ + F V ++ K G +P+ AT+ L+R
Sbjct: 99 IPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATF------------NTLIR 146
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
EGKI E + M G Y L LC G A I+ LR
Sbjct: 147 GLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAA------IRLLR--- 197
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
SM+ G+ C+P++ +++ ++ ++A LF
Sbjct: 198 ------------SMEQGN--------------CQPDVVVYTSIIDSLCKDRQVTQAFNLF 231
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
E S P +TY+S++ A +W++ + M S +
Sbjct: 232 SEMIHQGIS-------------PSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNV 278
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINA 609
+ ++ + GK D +++ G P+ + + ++ ++S ++AV + +
Sbjct: 279 VIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDT 338
Query: 610 MAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCR 669
M F ++ L +K L +C + +T S L +H LC
Sbjct: 339 MVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL---MHGLCH 395
Query: 670 SEKERDLSSSAH 681
+ +D + H
Sbjct: 396 VGRLQDAIALFH 407
>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
Length = 484
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 134/320 (41%), Gaps = 46/320 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y+ L+ L +A R A++++++MLE N D AY+++A + + E +++++
Sbjct: 184 FTYSTLVHGLCQAERLEAAIKVYDMMLEA-NYDGDAGAYNAMADGFCKERRVDEALEVLK 242
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKP 347
M Q+ K P +V YN ++N C ++ + + +F+Q+ S P
Sbjct: 243 TMIQRRCK---------------PSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPP 287
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+A TYG ++ + ++ + + M + G+ Y+ L
Sbjct: 288 NAVTYG------------TMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFV 335
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG--GHIDDCISIFQHMKDH-CEP 464
+ +A +++ + H P +T LI +D+ + +FQ+MKD P
Sbjct: 336 KVRKLDEAKSILQD-AARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWP 394
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
N+ T N +L+ + F +A ++F+E + S P+ T+ M
Sbjct: 395 NVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCS-------------PNRMTFKVMTMGM 441
Query: 525 ATAHQWEYFEYVYKGMALSG 544
+ + FE ++ M G
Sbjct: 442 IHCRKTDKFERIFMDMVYKG 461
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 110/302 (36%), Gaps = 51/302 (16%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA---VTLGQVGLLKEL 283
S + +T ++ P A R M + PD+ AY+ V LG+VG + L
Sbjct: 78 SLYSFTIIIQCFCNVRNPGRAWRYLGYM-RSLGIPPDVTAYNVVLKGYCDLGRVG--RAL 134
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+K K K K P++ YN V+N + +F +L
Sbjct: 135 IKF-----GKMGKTCK------------PNVATYNTVINGLCKFGKIDWAVHLFTRLPHD 177
Query: 344 GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
+ P TY LV + ++ A+ M + G A Y +A
Sbjct: 178 LVDPDGFTY------------STLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMA 225
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD-GGHIDDCISIFQHM-KDH 461
C R +A+ V++ + R KP +T+ +I I++ +FQ M
Sbjct: 226 DGFCKERRVDEALEVLKTMIQ-RRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSD 284
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
C PN T M+ S+ + ELF+ ++A L PD Y Y S++
Sbjct: 285 CPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAG-------------LSPDGYAYHSLI 331
Query: 522 EA 523
A
Sbjct: 332 YA 333
>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1025
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 164/417 (39%), Gaps = 45/417 (10%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
+F+ + + E + LL G+ G+ +A LD + + L + YT LL
Sbjct: 511 EFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEA---LDLCEKMVTRNILPDTYTYTILL 567
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS 295
K G+ AL + +MLE L PD AY + L G +K + + + K
Sbjct: 568 DGFCKRGKVVPALILLQMMLEK-GLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEG 626
Query: 296 KRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
L D + YN+++N + Q + + + + ++ + PS+A+Y +
Sbjct: 627 --------------LYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNIL 672
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
M Y + +G+++ + R+M + G+ Y L LC G + A
Sbjct: 673 MHGYIK------------KGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIA 720
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLK 474
+ +EK+ L P + F LI + + + + + +F +MK H P+ T AM+
Sbjct: 721 VKFLEKM-VLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVN 779
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
R + ++ E+ + + L+P Y +++ A +
Sbjct: 780 GLIRKNWLQQSYEILHDMVESG-------------LQPKHTHYIALINAKCRVGDIDGAF 826
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + M G + + ++ + GK F S++ AG +P FT ++
Sbjct: 827 ELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLM 883
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 138/369 (37%), Gaps = 76/369 (20%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
+L L +G +A S+L +K+ R L + Y +L K GR ALRI + M
Sbjct: 236 VLNSLCTQGKLSKAESMLQ---KMKNCR-LPNAVTYNTILNWYVKKGRCKSALRILDDM- 290
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E + D+ Y+ + L ++ L++RMR+ L PD
Sbjct: 291 EKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVN---------------LTPDEC 335
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-------------- 361
YN +++ + ++F Q+ + LKPS ATY ++ Y R
Sbjct: 336 SYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEM 395
Query: 362 ------------------CLLK-------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
C+L + A EG I EA + M + +
Sbjct: 396 QITGVRPREVSKAKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDV 455
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMDGGHIDDCISIF 455
+ + + C G +A V + + +RH P +I T+ L+ GGH+
Sbjct: 456 ASFNCIIDSYCQRGNVLEAFSVYDNM--VRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM 513
Query: 456 QHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 514
++ + C + T+N +L ++ +A +L E+ N + PD
Sbjct: 514 VYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRN-------------ILPDT 560
Query: 515 YTYSSMLEA 523
YTY+ +L+
Sbjct: 561 YTYTILLDG 569
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 122/308 (39%), Gaps = 57/308 (18%)
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK 346
+++ R K + RI + KN +E DL YN +++ + + + K++R+ L
Sbjct: 275 VKKGRCKSALRILDDMEKNG---IEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLT 331
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P +Y L+ F+ EGKIN A+ M ++ + + + Y L
Sbjct: 332 PDECSY------------NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGY 379
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHID-DCIS----IFQHMKDH 461
C NGR +A V+ +++ + +P E++ I+ M ID D I+ I + M
Sbjct: 380 CRNGRTDEARRVLYEMQ-ITGVRPREVSKAKQILKCMLADGIDPDVITYSALINEGMIAE 438
Query: 462 CEP------------NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
E ++ + N ++ Y + +A +++ R G P
Sbjct: 439 AEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVR-----------HGWP 487
Query: 510 LKPDEYTYSSML----EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
PD TY S+L + E+ Y+ + C +D+ LLV + G
Sbjct: 488 --PDICTYGSLLRGLCQGGHLVQAKEFMVYLLE----KACAIDEKTLNTLLVGICKHGT- 540
Query: 566 HLLEHAFD 573
L+ A D
Sbjct: 541 --LDEALD 546
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 26/234 (11%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
D+ N VLN+ + + ++++ L P+A TY + Y +
Sbjct: 229 DVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVK----------- 276
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
+G+ A+ + +ME+ G+ Y + LC R A L++++++ + + P E
Sbjct: 277 -KGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLT-PDE 334
Query: 433 ITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
++ LI G I+ I IF Q ++ +P++ T A++ Y RN +A+ + E
Sbjct: 335 CSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYE 394
Query: 492 T------TRANSSGYTFLS---GDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
R S L DG + PD TYS+++ A ++ +Y+
Sbjct: 395 MQITGVRPREVSKAKQILKCMLADG--IDPDVITYSALINEGMIAEAEQFKQYM 446
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 127/300 (42%), Gaps = 64/300 (21%)
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC------LLKVLVR 369
+Y ++ V + V + L +G SA L + + RC + +LV
Sbjct: 110 IYCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSL-LRTISRCDPTNLFSVDLLVN 168
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI------- 422
A+ +EGK+ +A AA+ M++ G AS++ CNN +A++ + K
Sbjct: 169 AYVKEGKVLDAAAAIFFMDECGF--KASLFS------CNN--ILNALVGINKSEYVWLFL 218
Query: 423 -KSLRHSKPLEITFTGLIISSM-DGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRND 480
+SL PL++T ++++S+ G + S+ Q MK+ PN T N +L Y +
Sbjct: 219 KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWYVKKG 278
Query: 481 MFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
A + ++ + ++ D YTY+ M++
Sbjct: 279 RCKSALRILDDMEKNG-------------IEADLYTYNIMIDKL---------------- 309
Query: 541 ALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA----GEIPHPLF-FTEMLIQAI 595
C+L ++ A+LL++ R E ++++L+ G+I ++ F +ML Q++
Sbjct: 310 ----CKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSL 365
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 121/298 (40%), Gaps = 46/298 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI-LGKAGRPHEALRIFNLM 254
L+ G KG + + ++Y K +K V +LL L + G A++ M
Sbjct: 672 LMHGYIKKGQLSRTL----YLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKM 727
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR---QKPSKR-----IKNMHRKNW 306
+ + ++PD A+ + + + ++L M+ PS + + + RKNW
Sbjct: 728 VLE-GVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNW 786
Query: 307 ---------DPV---LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
D V L+P Y A++NA G F + + ++ G+ PS
Sbjct: 787 LQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVA--- 843
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
ES +VR + GK+ EA+ ++ + G+V T + + L LC + D
Sbjct: 844 --ES-------SIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDD 894
Query: 415 AMLVVEKIKSLRHSKPLE---ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGT 468
A +K L S L+ +T+ LI + I D + +++ MK PNI T
Sbjct: 895 AF----HLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITT 948
>gi|414590862|tpg|DAA41433.1| TPA: hypothetical protein ZEAMMB73_769800 [Zea mays]
Length = 1295
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 125/312 (40%), Gaps = 61/312 (19%)
Query: 145 WHPEKR--WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGL-------------MFT 189
+H K+ + + + +LVD L ++ K + + M ++G+ +
Sbjct: 960 FHGMKKCGYVPDVHSYSILVDGLCKQGDLLKGYDMLEEMARNGICPNQVSYSSLLHGLCK 1019
Query: 190 EGQM---LKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKS----------------RFV 230
GQ+ LK+ K L D G ++ ++G DLK+ +
Sbjct: 1020 TGQVALALKIFKNLQDHGFEHDQINYSIILHGCCQHLDLKAISDLWFDMIHHNIAPDVYN 1079
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L + +AL +F LMLE+ L P+I + + + GL+ E ++RM
Sbjct: 1080 YTSLIYALCRHRNLQDALGVFELMLEN-GLSPNIVTCTILVDSFSKQGLVGEAFLFLDRM 1138
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q + P+L +Y ++N ++++ GV+ VF + K G P
Sbjct: 1139 HQSLG--------------IVPNLCMYRVMINGLCKTNKYSGVWNVFADMIKRGYVPDVV 1184
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
Y + +E + + L K+ EA+ M GV Y L LCN+
Sbjct: 1185 LYSIIIEGFVKAL------------KLQEALRLYHKMLDEGVKPNIFTYSSLINGLCNDD 1232
Query: 411 RWQDAMLVVEKI 422
R +AM ++ +
Sbjct: 1233 RLPEAMGLIRDM 1244
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 89/242 (36%), Gaps = 29/242 (11%)
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N +L V +Q +F ++ G P+ +Y + M Y E +
Sbjct: 834 NFLLKCLVEGNQIMYARSLFDDMKSCGPSPNVCSYSILMSMYTH----------GERSCL 883
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL-EITFT 436
EA + ME GV A+ Y LC + + A ++ + + P F
Sbjct: 884 EEAFELLCEMESNGVRPNATTYGTYLYGLCRSRQVTSAWDFLQTLS--QSGGPCSNYCFN 941
Query: 437 GLIISSMDGGHIDDCISIFQHMKDHCE--PNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
+I G +D I +F MK C P++ + + ++ + K ++ EE R
Sbjct: 942 AVIHGFCCEGQVDKAIEVFHGMK-KCGYVPDVHSYSILVDGLCKQGDLLKGYDMLEEMAR 1000
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
+ P++ +YSS+L Q ++K + G + DQ ++
Sbjct: 1001 NG-------------ICPNQVSYSSLLHGLCKTGQVALALKIFKNLQDHGFEHDQINYSI 1047
Query: 555 LL 556
+L
Sbjct: 1048 IL 1049
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 123/293 (41%), Gaps = 42/293 (14%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
L+ RF + L+ G+AG E++++F M + + P + ++SV L+
Sbjct: 153 LEDRF-FNSLIRSYGEAGLFKESVKLFENM-KLIGVSPGVVTFNSV------------LL 198
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
L++R R +K + + K + ++PD YN ++ + F+ FK++
Sbjct: 199 VLLKRGRTNMAKEVYDEMLKTYG--VKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFD 256
Query: 345 LKPSAATYGLAMESY-----------------RRC--------LLKVLVRAFWEEGKINE 379
P TY ++ ++C L+R + + +++E
Sbjct: 257 CDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDE 316
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
A+ + M RG+ Y L LC +W ++E++K S P TF LI
Sbjct: 317 ALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLI 376
Query: 440 ISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
S G++D+ +F++MK + + + +++ + + KA+ LF+E
Sbjct: 377 NSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDE 429
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 25/203 (12%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L+R++ E G E+V NM+ GV + + L GR A V +++
Sbjct: 161 LIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTY 220
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSR------- 478
KP T+ LI +D+ F+ M C+P++ T N ++ R
Sbjct: 221 GVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVA 280
Query: 479 ----NDMFSKAKELFEETTRANS--SGYT-----------FLSGDGAPLKPDEYTYSSML 521
N M K K+L + + GY +G LKP+ TY++++
Sbjct: 281 HNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLI 340
Query: 522 EASATAHQWEYFEYVYKGMALSG 544
+ A +W+ + + + M G
Sbjct: 341 KGLCEAQKWDKMKEILEQMKGDG 363
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 82/195 (42%), Gaps = 29/195 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDC-NLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y L+ L +AG+ A + N M + C +L PD+ Y ++ + + E + ++E
Sbjct: 263 TYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILE 322
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK-P 347
M + L+P++V YN ++ + +W + + +Q++ G P
Sbjct: 323 EMNGRG---------------LKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIP 367
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
A T+ L+ + G ++EA NM++ V ++ Y L LC
Sbjct: 368 DACTFN------------TLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLC 415
Query: 408 NNGRWQDAMLVVEKI 422
G + A ++ +++
Sbjct: 416 QKGDYGKAEMLFDEL 430
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 13/131 (9%)
Query: 435 FTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETT 493
F LI S + G + + +F++MK P + T N++L V + + AKE+++E
Sbjct: 158 FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEML 217
Query: 494 RANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHA 553
+ +KPD YTY+ ++ + Y +K M C D +
Sbjct: 218 KTYG------------VKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYN 265
Query: 554 WLLVEASRAGK 564
L+ RAGK
Sbjct: 266 TLVDGLCRAGK 276
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 132/326 (40%), Gaps = 46/326 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL +G A++VLD + +R + YT LL K +A+++ + M
Sbjct: 38 LIRGLCGRGRTANALAVLDE---MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM- 93
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D PDI Y+ V + Q G + + IE ++ PS EP+ V
Sbjct: 94 RDKGCTPDIVTYNVVVNGICQEGRVDDA---IEFLKNLPSYGC------------EPNTV 138
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN VL + +W+ + ++ + G P+ T+ + L+ +G
Sbjct: 139 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM------------LISFLCRKG 186
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
+ A+ + + + G + Y L C + AM ++ + S R P +++
Sbjct: 187 LVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS-RGCYPDIVSY 245
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
L+ + G +D + + +KD C P + + N ++ ++ +A EL E
Sbjct: 246 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV- 304
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSM 520
S G L+PD TYS++
Sbjct: 305 --SKG----------LQPDIITYSTI 318
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/300 (18%), Positives = 104/300 (34%), Gaps = 60/300 (20%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+V Y +L A +K + ++R G P TY V+V
Sbjct: 65 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTY------------NVVVNGI 112
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+EG++++A+ ++N+ G Y + LC RW+DA E++
Sbjct: 113 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDA----EELMG------- 161
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+ + C PN+ T N ++ R + A E+ E+
Sbjct: 162 ------------------------EMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 197
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
+ + P+ +Y+ +L A + + M GC D
Sbjct: 198 IPKYGCT-------------PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 244
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
+ LL R+G+ + L + G P + + ++ ++A+ L+N M
Sbjct: 245 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 304
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 119/302 (39%), Gaps = 22/302 (7%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
+V + G+++ AA R + + V A Y L LC GR +A+ V++++ R
Sbjct: 6 MVAGYCGAGQLD---AARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR-R 61
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 485
P +T+T L+ ++ + + M+D C P+I T N ++ + A
Sbjct: 62 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA 121
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
E + N Y +P+ +Y+ +L+ TA +WE E + M GC
Sbjct: 122 IEFLK-----NLPSYG--------CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC 168
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
+ L+ R G + + + G P+ L + +L Q +KA+A
Sbjct: 169 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 228
Query: 606 LINAM----AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLS 661
++ M Y T L S E ++ + L +L + C S + L+
Sbjct: 229 FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLT 288
Query: 662 RA 663
+A
Sbjct: 289 KA 290
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 14/181 (7%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+V YN +L A S + + QL+ G P +Y ++
Sbjct: 240 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISY------------NTVIDGL 287
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ GK EA+ + M +G+ Y +A LC R +DA+ K++ + +P
Sbjct: 288 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM-GIRPN 346
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ + +I+ I +F +M + C PN T +++ + + +A++L +
Sbjct: 347 TVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLD 406
Query: 491 E 491
E
Sbjct: 407 E 407
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 76/188 (40%), Gaps = 37/188 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL L G A+ +L + LKDK Y ++ L KAG+ EAL + N M+
Sbjct: 248 LLTALCRSGEVDVAVELL---HQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 304
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR---KNWDPVLEP 312
L PDI Y ++A GL +E RI++ R K D + P
Sbjct: 305 SK-GLQPDIITYSTIAA-----GLCRE-------------DRIEDAIRAFGKVQDMGIRP 345
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
+ V+YNA++ + +F + +G P+ +TY +L+
Sbjct: 346 NTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTY------------TILIEGLA 393
Query: 373 EEGKINEA 380
EG I EA
Sbjct: 394 YEGLIKEA 401
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 163/411 (39%), Gaps = 67/411 (16%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E R L++ L + + M + GL T+ ++ G+ KG
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
A+++L + + + + +Y+ ++ L K GR +A +F M E ++PD+ Y
Sbjct: 237 SALNLLRKMEEVS--HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTY 293
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+S+ V G + +L++ M + RK + PD+V YNA++NA V
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEM----------LERK-----ISPDVVTYNALINAFVKE 338
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESY------------------RRC-----LL 364
++ ++ ++ G+ P+ TY ++ + + C
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
L+ + +I++ + + M + G+V + Y L G A+ +++++ S
Sbjct: 399 NTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS 458
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK------------DHCEPNIGTVNAM 472
P +T L+ D G + D + +F+ M+ + EP++ T N +
Sbjct: 459 -SGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+ F +A+EL+EE + PD TYSSM++
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRG-------------IVPDTITYSSMIDG 555
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 119/283 (42%), Gaps = 26/283 (9%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L PD+V + +L+ + +F Q+ ++ +P+ T+ L+
Sbjct: 145 LHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF------------TTLMN 192
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
EG+I EAVA + M + G+ T Y + +C G A+ ++ K++ + H
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P + ++ +I S G D ++F M++ P++ T N+M+ + + +S A++L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+E S PD TY++++ A ++ E +Y M G +
Sbjct: 313 LQEMLERKIS-------------PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
++ ++ + + EH F + G P+ + F ++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/332 (18%), Positives = 136/332 (40%), Gaps = 30/332 (9%)
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
+L+ ++ RM ++P I ++++K + D+ +N ++ + F ++
Sbjct: 84 KLMGVVVRM-ERPDLVI-SLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKIT 141
Query: 342 KSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
K GL P T+ L+ E +++EA+ M + +
Sbjct: 142 KLGLHPDVVTF------------TTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTT 189
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD- 460
L LC GR +A+ +++++ +P +IT+ ++ G +++ + M++
Sbjct: 190 LMNGLCREGRIVEAVALLDRMME-DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEV 248
Query: 461 -HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
H PN+ +A++ ++ S A+ LF E + PD +TY+S
Sbjct: 249 SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG-------------IFPDLFTYNS 295
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 579
M+ ++ +W E + + M D + L+ + GK E +D +L G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 355
Query: 580 EIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
IP+ + ++ M+ Q+ + A + MA
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 111/295 (37%), Gaps = 54/295 (18%)
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
A R + + + + M E L D Y+++ VG L + L++ M
Sbjct: 408 AKRIDDGMELLHEMTET-GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG------ 460
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS-----------GLKPSA 349
L PD+V + +L+ + + K +FK ++KS G++P
Sbjct: 461 ---------LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY +L+ EGK EA M RG+V Y + LC
Sbjct: 512 QTY------------NILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQ 559
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
R +A + + + S S P +TFT LI G +DD + +F M + N T
Sbjct: 560 SRLDEATQMFDSMGSKSFS-PNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
++ + + + A ++F+E SSG + PD T +ML
Sbjct: 619 YITLICGFRKVGNINGALDIFQEMI---SSG----------VYPDTITIRNMLTG 660
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 98/244 (40%), Gaps = 19/244 (7%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ G + AL + M+ L PDI ++ L G LK+ +++ + M
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
QK K + H N +EPD+ YN +++ + ++ +++++ G+ P
Sbjct: 492 -QKSKKDLDASHPFNG---VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTI 547
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY ++ ++ +++EA +M + + L C G
Sbjct: 548 TY------------SSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
R D + + ++ R IT+ LI G+I+ + IFQ M P+ T+
Sbjct: 596 RVDDGLELFCEMGR-RGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITI 654
Query: 470 NAML 473
ML
Sbjct: 655 RNML 658
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 136/352 (38%), Gaps = 61/352 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL GL G R A+ +L + +D+ +Y ++ L K +EA + M
Sbjct: 243 LLNGLCKIGETRCAIKLLRMI---EDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEM- 298
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++PD+ Y ++ G L L+ M +KN++ PD+
Sbjct: 299 NSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMT------LKNIN---------PDVY 343
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY---------------- 359
Y +++A + K + + K G+KP+ TY M+ Y
Sbjct: 344 TYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAM 403
Query: 360 -------RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
C +++ + ++EA+ +R M + VV Y L LC +GR
Sbjct: 404 VQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRI 463
Query: 413 QDAMLVVEKIKSLRH-SKPLE-ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTV 469
A+ + +K L H +P + IT+T L+ ++D I++F MK+ +PN T
Sbjct: 464 TSAL---DLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTY 520
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
A++ + A++LF+ D YTY+ M+
Sbjct: 521 TALIDGLCKGARLKNAQKLFQHILVKGCC-------------IDVYTYNVMI 559
>gi|222626074|gb|EEE60206.1| hypothetical protein OsJ_13175 [Oryza sativa Japonica Group]
Length = 789
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 126/354 (35%), Gaps = 81/354 (22%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G+ GR +F M + PD A Y+ + G G KE+V+L +
Sbjct: 159 TYRVLLDLYGRQGRFDGVRELFREM--RTTVPPDTATYNVLFRVFGDGGFFKEVVELFQD 216
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +H + +EPD+ V+ AC + V + G+ P+A
Sbjct: 217 M----------LHSE-----VEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTA 261
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
Y LV A EA A M + G + T Y LA
Sbjct: 262 KAY------------TGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKG 309
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD--------- 460
G +Q+A + ++ + + + +F LI + G +DD + + M+
Sbjct: 310 GLFQEAEAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERS 369
Query: 461 -------HC--------------------EPNIGTVNAMLKVYSRNDMFSKAKELFEE-- 491
+C P+I ML +Y+RND ++ A +L EE
Sbjct: 370 LEGVLNAYCIAGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMK 429
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
T RA+S+ A + EY S W+ EYV L GC
Sbjct: 430 TNRASSTHQVI-----ASMIKGEYDDDS---------NWQMVEYVLDNSNLEGC 469
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 146/391 (37%), Gaps = 72/391 (18%)
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
L+ L MR PS P + PDL YN +L A + + + +
Sbjct: 33 LLGLFAEMRHDPS------------PSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLE 80
Query: 343 SGLKPSAATYGLAMESYRRC--LLKV---------------------LVRAFWEEGKINE 379
+G+ P A+Y ++++ L +V L+ A G E
Sbjct: 81 AGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAE 140
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGL 438
AVA +R M+ G TA+ Y L GR+ V E + +R + P + T+ L
Sbjct: 141 AVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDG---VRELFREMRTTVPPDTATYNVL 197
Query: 439 IISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
DGG + + +FQ M EP+I T ++ R + A+E+ +
Sbjct: 198 FRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLD------- 250
Query: 498 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 557
+++ +G + P Y+ ++EA A +E + M G + L
Sbjct: 251 ----YITTEG--MVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNAL-- 302
Query: 558 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHI 617
A+ K L + A EA F+ M A +Q + + ALI AY
Sbjct: 303 -ANAFAKGGLFQEA-----EA-------IFSRMTNNAAIQKDKDSFDALIE--AYCQGAQ 347
Query: 618 TERQWTELFESNEDRISRDK--LEKLLNALC 646
+ E + R + D+ LE +LNA C
Sbjct: 348 LDDAVKAYMEMRKSRFNPDERSLEGVLNAYC 378
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 111/310 (35%), Gaps = 37/310 (11%)
Query: 310 LEPDLVVYNAVLNAC-------VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
+ P YN VL AC VP G+F + ++P TY + +
Sbjct: 6 VAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDPSPSVRPDLTTYNTLLAAAAVR 65
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
L +++ +R M + GV+ + Y + G + ++
Sbjct: 66 ALS------------DQSEMLLRTMLEAGVLPDTASYRHIVDAFAGAGNLSRVAELFAEM 113
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDM 481
+ H+ P + GL+ + G + +++ + M+ D C P T +L +Y R
Sbjct: 114 SATGHT-PDPSAYLGLMEAHTLVGATAEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGR 172
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
F +ELF E + PD TY+ + ++ +++ M
Sbjct: 173 FDGVRELFREMRTT--------------VPPDTATYNVLFRVFGDGGFFKEVVELFQDML 218
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-Y 600
S + D ++V R G D + G +P +T L++A+ + Y
Sbjct: 219 HSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTG-LVEALGHAAMY 277
Query: 601 EKAVALINAM 610
E+A N M
Sbjct: 278 EEAYVAFNMM 287
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 105/244 (43%), Gaps = 30/244 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ G EA+++ + MLE NL PD+ Y+S+ + + G + ++I +
Sbjct: 199 YTILIEATLLQGGIDEAMKLLDEMLE-INLQPDMFTYNSIIRGMCREGYVDRAFQIISSI 257
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
K PD++ YN +L + +W+ + + + G + +
Sbjct: 258 SSKG---------------YAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVV 302
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
TY VL+ + +GK+ E V +++M+++G+ Y L LC G
Sbjct: 303 TY------------SVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEG 350
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTV 469
R A+ V++ + S P + + ++ D+ +SIF+ + + C PN +
Sbjct: 351 RVDLAIEVLDVMIS-DGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSY 409
Query: 470 NAML 473
N+M
Sbjct: 410 NSMF 413
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 122/305 (40%), Gaps = 39/305 (12%)
Query: 196 LLKGLGDKGSWRQAMSVL-DWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNL 253
LL+GL ++G W ++ D V R ++ V Y+ L++ + + G+ E + +
Sbjct: 272 LLRGLLNQGKWEAGYELMSDMV-----ARGCEANVVTYSVLISSVCRDGKVEEGVGLLKD 326
Query: 254 MLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPD 313
M + L PD Y + L + G + +++++ M PD
Sbjct: 327 MKKK-GLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCV---------------PD 370
Query: 314 LVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWE 373
+V YN +L + +F++L + G P+A++Y + A W
Sbjct: 371 IVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSY------------NSMFSALWS 418
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM-LVVEKIKSLRHSKPLE 432
G A+ + M +GV Y L CLC +G +A+ L+V+ KP
Sbjct: 419 TGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSV 478
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+++ +++ + D I + M D C PN T +++ + A++L
Sbjct: 479 VSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDL--A 536
Query: 492 TTRAN 496
TT N
Sbjct: 537 TTLVN 541
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/407 (19%), Positives = 155/407 (38%), Gaps = 47/407 (11%)
Query: 186 LMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH 245
L F + +LK L G++ +++ L + K D+ + TKL+ L +
Sbjct: 53 LDFKDTHLLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDV---VLCTKLIHGLFTSKTID 109
Query: 246 EALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKN 305
+A+++ ++ LE+ + +PD+ AY+++ + + ++++RM+ K
Sbjct: 110 KAIQVMHI-LEN-HGHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKG----------- 156
Query: 306 WDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK 365
PD+V YN ++ + QL K KP+ TY
Sbjct: 157 ----FSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTY------------T 200
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+L+ A +G I+EA+ + M + + Y + +C G A ++ I S
Sbjct: 201 ILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISS- 259
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
+ P IT+ L+ ++ G + + M CE N+ T + ++ R+ +
Sbjct: 260 KGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEE 319
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
L ++ + LKPD Y Y ++ A + + V M G
Sbjct: 320 GVGLLKDMKKKG-------------LKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDG 366
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
C D + +L + + F+ L E G P+ + M
Sbjct: 367 CVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMF 413
>gi|357451329|ref|XP_003595941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484989|gb|AES66192.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 472
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 127/308 (41%), Gaps = 40/308 (12%)
Query: 249 RIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR--------IKN 300
+ NLM+ D + PD +L + + V+LI+ + K +KN
Sbjct: 165 QTLNLMVSD-GISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKN 223
Query: 301 MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR 360
+ + ++ P+LV Y +++ + + + L + G KP Y M+ Y
Sbjct: 224 LCKSRTLSLVYPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGY- 282
Query: 361 RCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
C+L + +EA+ M+++GV Y L L +GR +A ++
Sbjct: 283 -CML----------SRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLR 331
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRN 479
+ H P E+T+T L+ G +++ + M+ C PN T N +L ++
Sbjct: 332 VMAEKGHF-PDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKS 390
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT----AHQWEYFEY 535
MF KA EL Y + DG LK D +Y++ + A + A +E F+Y
Sbjct: 391 RMFDKAMEL-----------YGAMKSDG--LKLDMASYATFVRALCSVGRVADAYEVFDY 437
Query: 536 VYKGMALS 543
+ +LS
Sbjct: 438 AVESKSLS 445
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 84/221 (38%), Gaps = 31/221 (14%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + + + + V I+ + G ++KG +A+ V + +
Sbjct: 242 ILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNR---M 298
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+K Y L+ L K+GR EA ++ +M E + +PD Y S+ + + G
Sbjct: 299 KEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGH-FPDEVTYTSLMNGMCRKGE 357
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ L+E M K P+ YN +L+ S + ++
Sbjct: 358 TLAALALLEEMEMKGC---------------SPNTCTYNTLLHGLCKSRMFDKAMELYGA 402
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEA 380
++ GLK A+Y VRA G++ +A
Sbjct: 403 MKSDGLKLDMASYA------------TFVRALCSVGRVADA 431
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 50/268 (18%), Positives = 105/268 (39%), Gaps = 31/268 (11%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQR--GVVGTASVYYELA--CCLCNNGRWQDAMLVVEKI 422
L++++ IN+++A +R+M + S Y+ L CC + ++ L+ + +
Sbjct: 108 LLQSYASISTINDSIAFLRHMTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTL 167
Query: 423 KSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRN 479
+ P + T + S +DD + + + + HC P+I + N ++K ++
Sbjct: 168 NLMVSDGISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKS 227
Query: 480 -----------------DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
D K L E T + L +G KPD + Y+++++
Sbjct: 228 RTLSLVYPNLVTYTILIDNVCNTKNLREATRLVD-----ILEEEG--FKPDCFLYNTIMK 280
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ VY M G + D + L+ S++G+ + + E G P
Sbjct: 281 GYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFP 340
Query: 583 HPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ +T ++ + A+AL+ M
Sbjct: 341 DEVTYTSLMNGMCRKGETLAALALLEEM 368
>gi|297725255|ref|NP_001174991.1| Os06g0710800 [Oryza sativa Japonica Group]
gi|53792631|dbj|BAD53645.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|215693375|dbj|BAG88757.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677390|dbj|BAH93719.1| Os06g0710800 [Oryza sativa Japonica Group]
Length = 492
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 140/326 (42%), Gaps = 33/326 (10%)
Query: 174 NWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTK 233
+W + M + G+ L++ D G W++A ++ + L + D+K +Y
Sbjct: 175 SWWVLGEMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELGVELDVK---IYNG 231
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+ GK G+ +A ++F+ M + + PDI ++S+ +VG K ++ M+++
Sbjct: 232 LIDTFGKYGQLADARKVFDKMCAE-GVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEE 290
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
+ PD ++ +++ +W + +F +R GLK S A Y
Sbjct: 291 G---------------MYPDPKIFVTIISRLGEQGKWDEIKKLFHGMRNRGLKESGAVYA 335
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
VLV + + G +A V ++ + + S++ LA G +
Sbjct: 336 ------------VLVDIYGQYGHFRDAHDCVAALKAENLQLSPSIFCVLANAYAQQGLCE 383
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAM 472
+ V++ +++ +P + LI + G + +++ QH+KD P++ T +
Sbjct: 384 QTVNVLQLMEA-EGIEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPDVVTYTTL 442
Query: 473 LKVYSRNDMFSKAKELFEETTRANSS 498
+K + R F K E+++E A +
Sbjct: 443 MKAFMRAKKFEKVSEVYKEMEGAGCT 468
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/340 (19%), Positives = 137/340 (40%), Gaps = 50/340 (14%)
Query: 215 WVYGLKDKRDLK-SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
WV G +R ++ Y+ L+ + G +A + + +++ + D+ Y+ + T
Sbjct: 177 WVLGEMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLI-MEMQELGVELDVKIYNGLIDT 235
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
G+ G L + K+ ++M + K PD+ +N+++ K
Sbjct: 236 FGKYGQLADARKVFDKMCAEGVK---------------PDITTWNSLIRWHCRVGNTKRA 280
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
F +++ G+ P + ++ E+GK +E M RG+
Sbjct: 281 LRFFAAMQEEGMYPDPKIF------------VTIISRLGEQGKWDEIKKLFHGMRNRGLK 328
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT---FTGLIISSMDGGHIDD 450
+ +VY L G ++DA V +K+ + L+++ F L + G +
Sbjct: 329 ESGAVYAVLVDIYGQYGHFRDAHDCVAALKA----ENLQLSPSIFCVLANAYAQQGLCEQ 384
Query: 451 CISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
+++ Q M+ + EPN+ +N ++ + +A + + + S
Sbjct: 385 TVNVLQLMEAEGIEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMS----------- 433
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
PD TY+++++A A ++E VYK M +GC D+
Sbjct: 434 --PDVVTYTTLMKAFMRAKKFEKVSEVYKEMEGAGCTPDR 471
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 87/192 (45%), Gaps = 21/192 (10%)
Query: 171 TAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV 230
T + +F M + G+ + ++ LG++G W + + +G++++ +S V
Sbjct: 277 TKRALRFFAAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLF---HGMRNRGLKESGAV 333
Query: 231 YTKLLAILGKAGRPHEALR-IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+ I G+ G +A + L E+ L P I + +A Q GL ++ V +++
Sbjct: 334 YAVLVDIYGQYGHFRDAHDCVAALKAENLQLSPSI--FCVLANAYAQQGLCEQTVNVLQL 391
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M + +EP+LV+ N ++NA + + V + ++ SG+ P
Sbjct: 392 MEAEG---------------IEPNLVMLNLLINAFGTAGRHLEALAVLQHIKDSGMSPDV 436
Query: 350 ATYGLAMESYRR 361
TY M+++ R
Sbjct: 437 VTYTTLMKAFMR 448
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 32/239 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y +L+ L +AGR EA + L + L PD A Y+++ L L+ +L+ +M
Sbjct: 89 YARLIRALARAGRTLEAEALL-LEMRRLGLRPDAAHYNALLEGLLSTAHLRLADRLLLQM 147
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
R + Y +LNA + + + +WV ++++ G++ A
Sbjct: 148 ADDGVARNRR---------------TYMLLLNAYARAGRLEDSWWVLGEMKRRGIRLDTA 192
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
Y LVR + + G +A + M++ GV +Y L G
Sbjct: 193 GY------------STLVRLYRDNGMWKKATDLIMEMQELGVELDVKIYNGLIDTFGKYG 240
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD---HCEPNI 466
+ DA V +K+ + KP T+ LI G+ + F M++ + +P I
Sbjct: 241 QLADARKVFDKMCA-EGVKPDITTWNSLIRWHCRVGNTKRALRFFAAMQEEGMYPDPKI 298
Score = 39.7 bits (91), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 104/278 (37%), Gaps = 31/278 (11%)
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+ ++ +GL+PS A Y L+RA G+ EA A + M + G+
Sbjct: 73 LLADMQAAGLRPSGAAYAR------------LIRALARAGRTLEAEALLLEMRRLGLRPD 120
Query: 396 ASVYYELACCLCNNG--RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
A+ Y L L + R D +L+ + ++ T+ L+ + G ++D
Sbjct: 121 AAHYNALLEGLLSTAHLRLADRLLLQMADDGVARNRR---TYMLLLNAYARAGRLEDSWW 177
Query: 454 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
+ MK + + ++++Y N M+ KA +L E ++
Sbjct: 178 VLGEMKRRGIRLDTAGYSTLVRLYRDNGMWKKATDLIMEMQELG-------------VEL 224
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
D Y+ +++ Q V+ M G + D T L+ R G F
Sbjct: 225 DVKIYNGLIDTFGKYGQLADARKVFDKMCAEGVKPDITTWNSLIRWHCRVGNTKRALRFF 284
Query: 573 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
++ E G P P F ++ + Q +++ L + M
Sbjct: 285 AAMQEEGMYPDPKIFVTIISRLGEQGKWDEIKKLFHGM 322
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 99/487 (20%), Positives = 191/487 (39%), Gaps = 77/487 (15%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGL---MFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
VL+D + + + M + GL +F ++ G GD + R+ + D +
Sbjct: 190 VLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRE---LFDEM 246
Query: 217 YGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+R + V Y+ L+ LG+ GR EA + M + PD+ AY +A L
Sbjct: 247 L----RRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTAR-GVRPDVVAYTVLADGLC 301
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
+ G + +K+++ M QK EP + YN V+N + F
Sbjct: 302 KNGRAGDAIKVLDLMVQKGE---------------EPGTLTYNVVVNGLCKEDRMDDAFG 346
Query: 336 VFKQLRKSGLKPSAATY-----GL--------AMESYRRCL------------LKVLVRA 370
V + + K G KP A TY GL AM+ ++ L L++
Sbjct: 347 VVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQG 406
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS-- 428
+EG++++A +M + G+ G Y L + A ++E +K +++
Sbjct: 407 LCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLI------EGYLAARKLIEALKLWKYAVE 460
Query: 429 ---KPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSK 484
P +T++ +I + +F MKD P + NA++ R D +
Sbjct: 461 SGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQ 520
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
A+ LF+E N + D +++ +++ + A + + + M +
Sbjct: 521 ARSLFQEMRNVNHN-------------VDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMD 567
Query: 545 CQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
D + L+ S+ G ++ ++ G +P + F +L ++ EK +
Sbjct: 568 LVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKII 627
Query: 605 ALINAMA 611
+L++ MA
Sbjct: 628 SLLHQMA 634
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/330 (17%), Positives = 132/330 (40%), Gaps = 29/330 (8%)
Query: 286 LIERMRQ-KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
LI+ +R+ + + +++ K ++ P +A+ + V +H F V + K G
Sbjct: 48 LIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRG 107
Query: 345 LKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQR--GVVGTASVYYEL 402
+G+ + + L ++++ F G+ ++A++ M++ VV Y L
Sbjct: 108 -------FGVNVYN-----LNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTL 155
Query: 403 ACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDH 461
C R +A ++ E +K +P +T++ LI G + + + + + M ++
Sbjct: 156 VNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREG 215
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
+ ++ ++++ + +ELF+E R S P+ TYS ++
Sbjct: 216 LKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVS-------------PNVVTYSCLM 262
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEI 581
+ +W + K M G + D + L + G+ D +++ GE
Sbjct: 263 QGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEE 322
Query: 582 PHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
P L + ++ + + A ++ M
Sbjct: 323 PGTLTYNVVVNGLCKEDRMDDAFGVVEMMV 352
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 137/341 (40%), Gaps = 48/341 (14%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
+R +D ++ K + Y L+ L GR +A R+ + MLE + P++
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVV 329
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
++++ + G L E KL E M Q+ ++PD + YN ++N
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRS---------------IDPDTITYNLLINGFC 374
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
++ +FK + P+ TY L+ F + ++ + V R
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTY------------NTLINGFCKCKRVEDGVELFR 422
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGLIISSMD 444
M QRG+VG Y + G A +V +++ S R P +I T++ L+
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR--VPTDIMTYSILLHGLCS 480
Query: 445 GGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
G +D + IF+++ K E NI N M++ + +A +LF +
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---------- 530
Query: 504 SGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
+KPD TY++M+ + + + +++ M G
Sbjct: 531 ------IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/289 (18%), Positives = 116/289 (40%), Gaps = 34/289 (11%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES---YRRCLLKVL 367
+PDLV Y V+N + ++ + +K + + ++S YR ++V
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH--VEVA 277
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
V F E ME +G+ Y L CLCN GRW DA ++ + +
Sbjct: 278 VDLFTE-------------METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE-KK 323
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
P +TF LI + G + + + + M + +P+ T N ++ + ++ +AK
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 487 ELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
++F+ + P+ TY++++ + E +++ M+ G
Sbjct: 384 QMFKFMVSKDC-------------LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
+ + ++ +AG C + F ++ + +P + +L+ +
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMV-SNRVPTDIMTYSILLHGL 478
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 85/426 (19%), Positives = 155/426 (36%), Gaps = 91/426 (21%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL G A++++D + + K D F +T L+ L + EA+ + + M+
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPD---TFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 256 E-DCNLYPDIAAYHSVAVTL---GQVGLLKELVKLIERMRQKPSKRIKN----------- 300
+ C PD+ Y +V L G + L L+ +E R K + I N
Sbjct: 216 QRGCQ--PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 301 ------MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
+ + + P++V YN+++N +W + + + + P+ T+
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF-- 331
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
L+ AF++EGK+ EA M QR +
Sbjct: 332 ----------NALIDAFFKEGKLVEAEKLHEEMIQRSI---------------------- 359
Query: 415 AMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAM 472
P IT+ LI +D+ +F+ M KD C PNI T N +
Sbjct: 360 --------------DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD-CLPNIQTYNTL 404
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
+ + + ELF E ++ G T TY+++++ A +
Sbjct: 405 INGFCKCKRVEDGVELFREMSQRGLVGNTV-------------TYTTIIQGFFQAGDCDS 451
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI 592
+ V+K M + D ++ LL GK F L+ E+ +F +I
Sbjct: 452 AQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF-KYLQKSEMELNIFIYNTMI 510
Query: 593 QAIVQS 598
+ + ++
Sbjct: 511 EGMCKA 516
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 122/314 (38%), Gaps = 43/314 (13%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
EPD+V +++LN S + + Q+ + G KP T+ L+
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF------------TTLIHG 197
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ K +EAVA V M QRG Y + LC G A+ ++ K+++ R K
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR-IKA 256
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+ F +I S H++ + +F M+ PN+ T N+++ +S A L
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 490 EETT--RANSSGYTFLSGDGAPLK--------------------PDEYTYSSMLEASATA 527
+ N + TF + A K PD TY+ ++
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAGEIPHP 584
++ + + ++K M C + + L+ + KC +E F + + G + +
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLI---NGFCKCKRVEDGVELFREMSQRGLVGNT 433
Query: 585 LFFTEMLIQAIVQS 598
+ +T +IQ Q+
Sbjct: 434 VTYTT-IIQGFFQA 446
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 98/500 (19%), Positives = 193/500 (38%), Gaps = 68/500 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++G G A+ +L+ +K + V+T L+ L AGR EAL F M
Sbjct: 15 LIRGFSSAGDLDIAIQLLEE---MKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA 71
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+DC PD+ Y ++ L + G E ++ M + PD V
Sbjct: 72 KDCA--PDVMTYTALVHALCKAGKFDEAQGMLREMIARGCA---------------PDTV 114
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC------------- 362
++ +++ + F V + + + G+ S A + ++ R C
Sbjct: 115 TFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQ--RLCNKYNSVELASKVL 172
Query: 363 -------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+ +++ F + ++ A + M ++G V + L LC
Sbjct: 173 GVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKA 232
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
R +A ++EK+ + S P +T++ +I G +DD +FQ M + +C PN+ T
Sbjct: 233 NRVGEAQQLLEKMVTGGCS-PNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVT 291
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
N ++ + +A++L+ R +G PD TY+S+++ +
Sbjct: 292 HNILIDGLCKAKRIEEARQLYH---RMRETG----------CAPDIITYNSLIDGLCKSF 338
Query: 529 QWEYFEYVYKGMALSGCQ-LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
Q + +++ + SG + ++ L + G+ F L++ G P +
Sbjct: 339 QVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATY 398
Query: 588 TEMLIQAIVQSNYEKAVALINAMAYAPF----HITERQWTELFESNEDRISRDKLEKLLN 643
T ++++ S + V L+ MA F + LFE N + + +
Sbjct: 399 TSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAA 458
Query: 644 ALCNCNAASSEITVSNLSRA 663
C +A + V ++RA
Sbjct: 459 RGCTDDALIYNLVVEGMARA 478
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 109/294 (37%), Gaps = 46/294 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y+ L GR +A RIF+ ML D PD+A Y S+ ++E
Sbjct: 363 YSTLFHGYAALGRMADACRIFS-MLVDKGFSPDLATYTSL---------------ILEYC 406
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+ + + + + P + +AVL + + +F + G A
Sbjct: 407 KTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDAL 466
Query: 351 TYGLAMESYRRC--------------------------LLKVLVRAFWEEGKINEAVAAV 384
Y L +E R + LV + + G+ ++A +
Sbjct: 467 IYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLL 526
Query: 385 RNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM- 443
M +RG S Y L L RW +A V E + S + EI+ ++IS +
Sbjct: 527 HKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAP--EISTVNVVISWLC 584
Query: 444 DGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
+DD + Q M K C P+I T N ++ Y ++ A++L EE T A
Sbjct: 585 SAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAG 638
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 153/382 (40%), Gaps = 54/382 (14%)
Query: 150 RWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQA 209
++ SE +A RVL D + +R M + F I+ + + ++ + G+ +
Sbjct: 125 KFGSEEQAFRVLEDVI-QRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183
Query: 210 MSVLDWVY-GLKDKRDLKSR----------------FVYTKLLAILGKAGRPHEALRIFN 252
+ + + V G +DL S F +T L+ L KA R EA ++
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243
Query: 253 LMLEDCNLYPDIAAYHSVAVTL---GQVGLLKELVKLIERMRQKP--------------S 295
M+ P++ Y +V L GQV EL +L+ER P +
Sbjct: 244 KMVTG-GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKA 302
Query: 296 KRI---KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS-AAT 351
KRI + ++ + + PD++ YN++++ S Q F +F+ + +SG+ + A T
Sbjct: 303 KRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVT 362
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y L + G++ +A + +G + Y L C R
Sbjct: 363 Y------------STLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSR 410
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVN 470
+ + +VE++ S + P T + ++ +G H + I +F M C + N
Sbjct: 411 AVEVVELVEEMAS-KGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYN 469
Query: 471 AMLKVYSRNDMFSKAKELFEET 492
+++ +R +KA + E+
Sbjct: 470 LVVEGMARASKHNKALAVLEQV 491
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 17/129 (13%)
Query: 347 PSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
P+ TYG +L+R F G ++ A+ + M+ G G A V+ L L
Sbjct: 7 PNKFTYG------------ILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGL 54
Query: 407 CNNGRWQDAMLVVEKIKSL-RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEP 464
C+ GR +A+ E +++ + P +T+T L+ + G D+ + + M C P
Sbjct: 55 CDAGRVVEAL---EHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAP 111
Query: 465 NIGTVNAML 473
+ T + ++
Sbjct: 112 DTVTFSTLI 120
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 30/255 (11%)
Query: 247 ALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNW 306
AL I M+E + P A Y+ + + G L+ +M+++ S
Sbjct: 228 ALDILRQMVES-GIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSN---------- 276
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
D +PD+V Y VL+ + Q VF ++ G KPS ATY
Sbjct: 277 DENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYN------------A 324
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L++ ++G + +AVA +M ++G + Y L LC+ G+ AM +++++KS
Sbjct: 325 LIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKS-E 383
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMK--DHCEPNIGTVN----AMLKVYSRND 480
+P T+ LI S++ G I+ + +F+ M + C PN T N AM D
Sbjct: 384 GCEPNVQTYNVLIRYSLEEGEIEKGLDLFETMSKGEECLPNQDTYNIIISAMFVRKRAED 443
Query: 481 MFSKAKELFEETTRA 495
M A+ + E R
Sbjct: 444 MAVAARMVVEMVDRG 458
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 119/310 (38%), Gaps = 58/310 (18%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
RP A+R+F + + D+ ++S LL LVK R K + ++ +
Sbjct: 154 RPDLAIRLFLSLHRSHGIAQDLPLFNS---------LLDALVK--SRRASKAASLVRALE 202
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR- 361
++ PD V YN + + + +Q+ +SG+ P+ ATY + ++ + R
Sbjct: 203 QR-----FPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKATYNIILKGFFRS 257
Query: 362 ----------------------CLLKVL-----VRAFWEEGKINEAVAAVRNMEQRGVVG 394
C V+ + G++++A M G
Sbjct: 258 GQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKP 317
Query: 395 TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI 454
+ + Y L C G +DA+ V + + + P +T+T LI G + + +
Sbjct: 318 STATYNALIQVTCKKGNLEDAVAVFDDMVR-KGYIPNVVTYTVLIRGLCHAGKVVRAMKL 376
Query: 455 FQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 513
MK + CEPN+ T N +++ K +LFE ++ G P+
Sbjct: 377 LDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDLFETMSK------------GEECLPN 424
Query: 514 EYTYSSMLEA 523
+ TY+ ++ A
Sbjct: 425 QDTYNIIISA 434
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 107/250 (42%), Gaps = 42/250 (16%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E+R+ +A L D + T++ +R M +SG+ T+ +LKG G +
Sbjct: 202 EQRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKATYNIILKGFFRSGQLQ 261
Query: 208 QAMSVLDWVYGLKDKR------DLKSRFV-YTKLLAILGKAGRPHEALRIFNLM-LEDCN 259
A W + L+ KR + K V YT +L LG AG+ +A ++F+ M +E C
Sbjct: 262 HA-----WDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCK 316
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
P A Y+++ + G L++ V + + +M RK + P++V Y
Sbjct: 317 --PSTATYNALIQVTCKKGNLEDAVAVFD-----------DMVRKGYI----PNVVTYTV 359
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
++ + + + +++ G +P+ TY VL+R EEG+I +
Sbjct: 360 LIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYN------------VLIRYSLEEGEIEK 407
Query: 380 AVAAVRNMEQ 389
+ M +
Sbjct: 408 GLDLFETMSK 417
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
Query: 456 QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
Q ++ P T N +LK + R+ A + F + R S+ KPD
Sbjct: 234 QMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDEN--------CKPDVV 285
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
+Y+++L A Q + V+ M++ GC+ + L+ + G FD +
Sbjct: 286 SYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDM 345
Query: 576 LEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAM 610
+ G IP+ + +T +LI+ + + +A+ L++ M
Sbjct: 346 VRKGYIPNVVTYT-VLIRGLCHAGKVVRAMKLLDRM 380
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 102/257 (39%), Gaps = 25/257 (9%)
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
L L+ A + + ++A + VR +EQR A Y LA C R +D ++ +
Sbjct: 177 LFNSLLDALVKSRRASKAASLVRALEQR-FPPDAVTYNTLADGWC---RVKDTSRALDIL 232
Query: 423 KSLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHMK------DHCEPNIGTVNAMLK 474
+ + S P + T+ ++ G + F MK ++C+P++ + +L
Sbjct: 233 RQMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLH 292
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
KA+++F+E +S +G KP TY+++++ + E
Sbjct: 293 GLGVAGQLDKARKVFDE-----------MSIEGC--KPSTATYNALIQVTCKKGNLEDAV 339
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 594
V+ M G + + L+ AGK D + G P+ + ++ +
Sbjct: 340 AVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYS 399
Query: 595 IVQSNYEKAVALINAMA 611
+ + EK + L M+
Sbjct: 400 LEEGEIEKGLDLFETMS 416
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 29/211 (13%)
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY--RRCL-- 363
P +P + +YN +L +C+ + + V W++K + G+ P T+ L + + C+
Sbjct: 106 PENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDA 165
Query: 364 -------------------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
+LVR + + G ++ + + +ME GV+ VY +
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVS 225
Query: 405 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK----- 459
C GR D+ +VEK++ P +TF I + G + D IF M+
Sbjct: 226 SFCREGRNDDSEKLVEKMRE-EGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Query: 460 DHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
PN T N MLK + + + AK LFE
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFE 315
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 143/379 (37%), Gaps = 61/379 (16%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ F + L+ KAG + L + N M E + P+ Y+++ + + G + KL
Sbjct: 181 NEFTFGILVRGYCKAGLTDKGLELLNSM-ESFGVLPNKVVYNTIVSSFCREGRNDDSEKL 239
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS--- 343
+E+MR++ L PD+V +N+ ++A + +F +
Sbjct: 240 VEKMREEG---------------LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYL 284
Query: 344 GL-KPSAATYGLAMESYRRCLL-----------------------KVLVRAFWEEGKINE 379
GL +P++ TY L ++ + + L + ++ GK E
Sbjct: 285 GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIE 344
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
A ++ M +G+ + Y L LC G DA +V +K P +T+ L+
Sbjct: 345 AETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR-NGVSPDAVTYGCLL 403
Query: 440 ISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
G +D S+ Q M+++C PN T N +L S+A+EL + N
Sbjct: 404 HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLR---KMNEK 460
Query: 499 GYTF-----------LSGDGAPLKPDEYTYSSMLEASATAHQW--EYFEYVYKGMALSGC 545
GY L G G K E + SA Y V + + C
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520
Query: 546 QLDQTKHAWLLVEASRAGK 564
D ++ LL +AG+
Sbjct: 521 LPDLITYSTLLNGLCKAGR 539
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 86/433 (19%), Positives = 161/433 (37%), Gaps = 83/433 (19%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNL---YPDIAAYHSVAVTLGQVGLLKELVKL 286
+ ++ L K G+ +A RIF+ M D L P+ Y+ + +VGLL++ L
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313
Query: 287 IERMRQ------------------KPSKRIK--NMHRKNWDPVLEPDLVVYNAVLNACVP 326
E +R+ + K I+ + ++ D + P + YN +++
Sbjct: 314 FESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCK 373
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY------------------RRCL----- 363
+ ++++G+ P A TYG + Y CL
Sbjct: 374 LGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYT 433
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC-CLCNNGRWQDAMLVVEKI 422
+L+ + W G+I+EA +R M ++G G +V + LC +G A +E +
Sbjct: 434 CNILLHSLWNMGRISEAEELLRKMNEKG-YGLDTVTCNIIVDGLCGSGELDKA---IEIV 489
Query: 423 KSLR-HSKP----LEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYS 477
K +R H L ++ GL+ S+ ++++C P++ T + +L
Sbjct: 490 KGMRVHGSAALGNLGNSYIGLVDDSL--------------IENNCLPDLITYSTLLNGLC 535
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+ F++AK LF E G L+PD Y+ + + V
Sbjct: 536 KAGRFAEAKTLFAEMM-------------GEKLQPDSLAYNIFIHHFCKQGKISSAFRVL 582
Query: 538 KGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQ 597
K M GC + L++ + + D + E G P+ + +
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEG 642
Query: 598 SNYEKAVALINAM 610
E A L++ M
Sbjct: 643 GKVEDATNLLDEM 655
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 111/317 (35%), Gaps = 35/317 (11%)
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL-----AILGKAGRPHEALR 249
+LL+ + +KG ++ V GL +L K + A LG G + L
Sbjct: 452 ELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLV 511
Query: 250 IFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV 309
+L+ +C PD+ Y ++ L + G E L M M K
Sbjct: 512 DDSLIENNC--LPDLITYSTLLNGLCKAGRFAEAKTLFAEM----------MGEK----- 554
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L+PD + YN ++ + F V K + K G S TY L+
Sbjct: 555 LQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY------------NSLIL 602
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+ +I E + M ++G+ Y LC G+ +DA +++++ ++
Sbjct: 603 GLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQ-KNIA 661
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
P +F LI + D +F+ C G + M KA EL
Sbjct: 662 PNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELL 721
Query: 490 EETTRANSSGYTFLSGD 506
E TFL D
Sbjct: 722 EAVLDRGFELGTFLYKD 738
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/413 (20%), Positives = 171/413 (41%), Gaps = 42/413 (10%)
Query: 144 EWHPEKRWRSEAEAIRVLVDRLS-EREM-TAKNWKFVRIMNQSGLMFTEGQMLK-LLKGL 200
+W +K + E+ ++++ L ER + A+N+ F + G + E + L++
Sbjct: 99 KWTQQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSY 158
Query: 201 GDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNL 260
+ G ++++M + +K S + L++IL K GR + A +++ ML +
Sbjct: 159 AEAGLFKESMKLFQT---MKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGV 215
Query: 261 YPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAV 320
PD Y+ + + ++ E + + M N D D+V YN +
Sbjct: 216 SPDTCTYNVLIRGFCKNSMVDEGFRFF-----------REMESFNCDA----DVVTYNTL 260
Query: 321 LNACVPSHQWKGVFWVFKQLRKS--GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKIN 378
++ + + + + + K GL P+ TY L+R + + ++
Sbjct: 261 VDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTY------------TTLIRGYCMKQEVE 308
Query: 379 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
EA+ + M RG+ Y L LC + V+E++KS P TF +
Sbjct: 309 EALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTI 368
Query: 439 IISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
I G++D+ + +F+ MK P + + + +++ + + A++LF+E
Sbjct: 369 IHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKE- 427
Query: 498 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
LS G+ KP +Y+ + E+ + + E V + + G Q Q+
Sbjct: 428 ---ILLSKFGS--KPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQS 475
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 123/313 (39%), Gaps = 40/313 (12%)
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
++S+ + + GL KE +KL + M+ + P +V +N++++ +
Sbjct: 151 FNSLIRSYAEAGLFKESMKLFQTMK---------------SIAVSPSVVTFNSLMSILLK 195
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRN 386
+ V+ ++ TYG++ ++ C VL+R F + ++E R
Sbjct: 196 RGRTNMAKEVYDEM--------LGTYGVSPDT---CTYNVLIRGFCKNSMVDEGFRFFRE 244
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI-KSLRHSKPLEITFTGLIISSMDG 445
ME Y L LC G+ + A +V + K P +T+T LI
Sbjct: 245 MESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMK 304
Query: 446 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+++ + + + M +PN+ T N ++K K K++ E +
Sbjct: 305 QEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLER-----------MK 353
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
DG PD +T+++++ A + V++ M D ++ L+ + G
Sbjct: 354 SDGG-FSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGD 412
Query: 565 CHLLEHAFDSLLE 577
+ E FD L E
Sbjct: 413 YDMAEQLFDELFE 425
>gi|387192495|gb|AFJ68660.1| hypothetical protein NGATSA_2025410, partial [Nannochloropsis
gaditana CCMP526]
Length = 527
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 150/389 (38%), Gaps = 43/389 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K G K +A+ V+ + L DL + + K RP E LR+F +
Sbjct: 56 LIKAYGMKKQADKALEVVRMMLELGVAPDLVT---LNAAMDACEKGKRPEEVLRLFREEV 112
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
L PDI +Y + G+ G L E + L E + LEP+L
Sbjct: 113 PRHGLVPDIFSYTVLVNMYGKRGELAEALALFE---------------EAVACGLEPELP 157
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y A++ A V + +++ SGL P A Y + + + R W
Sbjct: 158 AYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTK-------RLEW--- 207
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
++A+ +R ME +G+V Y L CL + + + A + +++ H KP +
Sbjct: 208 --SKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELY 265
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
+ + G ++IF+ M ++ +PN+ T A+++ + R A + +E R
Sbjct: 266 SLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRR 325
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
L D + L+ E E + + M SG L+ +
Sbjct: 326 KPG------------LARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQ 373
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
L A R+G+ L +L E +P+
Sbjct: 374 YLRGAMRSGRYELALQILSALFEKRLLPN 402
>gi|227202654|dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
Length = 815
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 131/295 (44%), Gaps = 45/295 (15%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT LL G++ +P +A +F LM+ P++ Y+++ G G L E V++ +M
Sbjct: 393 YTCLLNSYGRSRQPGKAKEVF-LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 451
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
Q ++P++V +L AC S + V V + G+ + A
Sbjct: 452 EQDG---------------IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 496
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
Y A+ SY ++ +A+A ++M ++ V + + L C
Sbjct: 497 AYNSAIGSY------------INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 544
Query: 411 RWQDAMLVVEKIKSLRHSKPL-EITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGT 468
++ +A+ +++++ L S PL + ++ ++ + G + + SIF MK CEP++
Sbjct: 545 KYPEAISYLKEMEDL--SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIA 602
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+ML Y+ ++ + KA EL E + +G ++PD S+++ A
Sbjct: 603 YTSMLHAYNASEKWGKACELLLE-----------MEANG--IEPDSIACSALMRA 644
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 88/475 (18%), Positives = 190/475 (40%), Gaps = 57/475 (12%)
Query: 162 VDRLSEREMTAKNWKFV-RIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
V + +R M W+ V ++N F L++ L +G ++V W +K
Sbjct: 78 VSEVVDRLMALNRWEEVDGVLNSWVGRFARKNFPVLIRELSRRGCIELCVNVFKW---MK 134
Query: 221 DKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+++ +R +Y ++ + + +A +F ++ + PD Y ++ G+ G
Sbjct: 135 IQKNYCARNDIYNMMIRLHARHNWVDQARGLF-FEMQKWSCKPDAETYDALINAHGRAGQ 193
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ + L++ M + + P YN ++NAC S W+ V K+
Sbjct: 194 WRWAMNLMDDMLR---------------AAIAPSRSTYNNLINACGSSGNWREALEVCKK 238
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ +G+ P T+ + + +Y+ + ++A++ M+ V + +
Sbjct: 239 MTDNGVGPDLVTHNIVLSAYK------------SGRQYSKALSYFELMKGAKVRPDTTTF 286
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLR-HSKPLEITFTGLIISSMDGGHIDDCISIFQHM 458
+ CL G+ A+ + ++ R +P +TFT ++ G I++C ++F+ M
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 459 -KDHCEPNIGTVNAMLKVYSRNDMFSKA-------------KELFEETTRANSSGYTFLS 504
+ +PNI + NA++ Y+ + M A ++ T NS G +
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406
Query: 505 GDGAPL---------KPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
G + KP+ TY+++++A + +++ M G + + L
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 466
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L SR+ K ++ + G + + + I + EKA+AL +M
Sbjct: 467 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 521
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 110/502 (21%), Positives = 187/502 (37%), Gaps = 102/502 (20%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPH-EALRIFNLM 254
L+ G G+WR+A+ V + DL V ++ K+GR + +AL F LM
Sbjct: 219 LINACGSSGNWREALEVCKKMTDNGVGPDL----VTHNIVLSAYKSGRQYSKALSYFELM 274
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK---------RIKNMHR-- 303
+ + PD ++ + L ++G + + L MR+K ++ I +++
Sbjct: 275 -KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVK 333
Query: 304 ---KNWDPVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+N V E P++V YNA++ A V ++++G+ P +Y
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 393
Query: 353 GLAMESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+ SY R L+ A+ G + EAV R MEQ
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 390 RGV-VGTASVYYELACCL---------------------CNNGRWQDAM------LVVEK 421
G+ SV LA C N + A+ +EK
Sbjct: 454 DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEK 513
Query: 422 IKSLRHS------KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV-NAMLK 474
+L S K +TFT LI S + IS + M+D P V +++L
Sbjct: 514 AIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLC 573
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
YS+ ++A+ +F + A +PD Y+SML A + +W
Sbjct: 574 AYSKQGQVTEAESIFNQMKMAGC-------------EPDVIAYTSMLHAYNASEKWGKAC 620
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP-LFFTEMLIQ 593
+ M +G + D + L+ ++ G+ + D L+ EIP F E+
Sbjct: 621 ELLLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD-LMREKEIPFTGAVFFEIFSA 679
Query: 594 AIVQSNYEKAVALINAM-AYAP 614
+++A+ LI M Y P
Sbjct: 680 CNTLQEWKRAIDLIQMMDPYLP 701
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 158/404 (39%), Gaps = 57/404 (14%)
Query: 177 FVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLA 236
F+R M L +G + L+ GL G +A+ + W L K + + L+
Sbjct: 453 FIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVEL--WCR-LLGKGFVPNIVTSNALIH 509
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
L KAG E L++ MLE L D Y+++ + G +KE +L E M +K
Sbjct: 510 GLCKAGNMQETLKLLRDMLER-GLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKG-- 566
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
++PD+ +N +L+ + + ++ + +K+G P+ TYG+ +
Sbjct: 567 -------------IQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMI 613
Query: 357 ESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
+ Y + + L+RA+ G +N A +M+ RGV+
Sbjct: 614 DGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVL 673
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
+ + Y L LCN G DA ++++++ P + +T +I G ++
Sbjct: 674 LSCATYSSLMHGLCNIGLVDDAKHLLDEMRK-EGLLPNVVCYTTIIGGYSKLGQMNKVNI 732
Query: 454 IFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
+ Q M H PN T M+ + + +A +L E T + P
Sbjct: 733 VLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKG-------------ILP 779
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
D TY++ + E V M+ LD+ + L+
Sbjct: 780 DAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 138/355 (38%), Gaps = 58/355 (16%)
Query: 244 PHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKE----LVKLIERMRQKPSKRIK 299
P AL F+ + E C +Y + L LL L++LI+ + P+ +
Sbjct: 100 PKTALNFFHFVSETCKFRFTARSYCVLIHLLVGNDLLSPARLLLIRLIDG--KVPAFYAR 157
Query: 300 NMHRK---------NWDPVLEPDLVVYNAVLNACVPSHQWKGVFW-----VFKQLRKSGL 345
N + +++ V EP + V A L V S Q+K + + VF L K GL
Sbjct: 158 NFESRHFEIAQIMADFNLVFEPVIGVKIADLLVHVYSTQFKHLGFGFAADVFSLLAKKGL 217
Query: 346 KPSAATYGLAMESYRR--------------CL---------LKVLVRAFWEEGKINEAVA 382
PS T + S + CL ++ AF + + ++A+
Sbjct: 218 FPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIG 277
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 442
ME+ GV Y + LC +GR +A EK+ + S P IT++ I
Sbjct: 278 LFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVS-PSLITYSVFINGL 336
Query: 443 MDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
+ ID+ + + M + PN N ++ Y + S+A ++ ++ S G
Sbjct: 337 IKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDML---SKG-- 391
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ P+ T +S+++ + Q E V + M G ++Q + ++
Sbjct: 392 --------ISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVI 438
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/405 (20%), Positives = 159/405 (39%), Gaps = 58/405 (14%)
Query: 228 RFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLI 287
R ++T ++ L KA R EA +F M E C PD AY+++ L + G +E +K++
Sbjct: 225 RALHTAMVRTLLKAKRVKEAREVFGQM-EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVL 283
Query: 288 ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKP 347
+ M K P V Y ++N+ + + +F+ + SG +P
Sbjct: 284 DNMLAKACV---------------PTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRP 328
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
++ Y L+ F + G++ EA + M + G + + LC
Sbjct: 329 NSVIY------------TSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNI 466
+G ++ A E++ KP +T+T +I G + + I + M H C P+
Sbjct: 377 KSGNFEQAAKSFEEMMR-GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDS 435
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
T +L + + +A +L +E + +SS P+ YSS++
Sbjct: 436 VTYICLLDGFCKLGRLDEAAQLLDELDKCSSS-------------PNLQLYSSLVNGLCD 482
Query: 527 AHQWE-YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
E + +++ + LD ++V + G+ F ++ G P
Sbjct: 483 GGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDAT 542
Query: 586 FFTEMLIQAIVQS---NYEKAVALI----------NAMAYAPFHI 617
+ +LI + +S E+A AL+ +A+ Y P I
Sbjct: 543 TYN-ILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCI 586
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 136/364 (37%), Gaps = 42/364 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + L+ + R +A+ F +M PD+ + + L + G
Sbjct: 155 FSFNILIRSFARTRRADDAVTCFEIMKRK-RCKPDLHTFLILVDCLCKAG---------- 203
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M +K + M + P PD ++ A++ + + + K VF Q+ K G P
Sbjct: 204 -MDEKAFEVFHEMMAMGFVP---PDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
A Y ++ + G EA+ + NM + V T Y L LC
Sbjct: 260 AIAY------------NTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCK 307
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIG 467
G + A + ++ + +P + +T LI G + + S+F M + P++
Sbjct: 308 AGTLERAEELF-RVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVI 366
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T M+ ++ F +A + FEE R KP+ TY+++++ +
Sbjct: 367 THTVMIDGLCKSGNFEQAAKSFEEMMRGGC-------------KPNVVTYTTIIQGLSKI 413
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
+ + KGM GC D + LL + G+ D L + P+ +
Sbjct: 414 GRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLY 473
Query: 588 TEML 591
+ ++
Sbjct: 474 SSLV 477
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 101/517 (19%), Positives = 189/517 (36%), Gaps = 100/517 (19%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+LV+ L + + + R+M SG L+ G G ++A S+ D +
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359
Query: 220 KDKRDLKSRFV--------------------------------YTKLLAILGKAGRPHEA 247
+ D+ + V YT ++ L K GR A
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA 419
Query: 248 LRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPS------------ 295
RI M+ +PD Y + ++G L E +L++ + + S
Sbjct: 420 FRIMKGMIAH-GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVN 478
Query: 296 ---------KRIKNM--HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
K + ++ K L+P L +++ + + +F+++ G
Sbjct: 479 GLCDGGSVEKTLDDLFEQSKAAAETLDPGLCC--SIIVGLCKTGRLDEACRIFQRMVSEG 536
Query: 345 LKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
KP A TY + L+ L R+ E ++ A A + ++E+ G + A Y L
Sbjct: 537 CKPDATTYNI--------LINGLCRS--RENRVERAFALLHDLEKVGYLPDAVTYTPLCI 586
Query: 405 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCE 463
LC G A+ ++E+ S R + +T L G +D +S+FQ M +
Sbjct: 587 GLCKIGEVDRAVKMLEEASS-RGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA 645
Query: 464 PNIGT----VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
P+ +N ++KV D A + F+E G KP TY++
Sbjct: 646 PDAAAYCCIINGLIKVKKLED----ACKFFDEMI-------------GKGQKPTVATYTA 688
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE-----HAFDS 574
+++A A + + ++ M G + + ++ +A G C L+ F+
Sbjct: 689 LVQALCHAGNVDEAFHRFESMLARG----ELVGSVMIYDALIHGFCKALKVDAALKLFED 744
Query: 575 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
++ G +P + + + EKA L+ MA
Sbjct: 745 MISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMA 781
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/292 (18%), Positives = 118/292 (40%), Gaps = 26/292 (8%)
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
D+ YN ++N V + + + +++ K+G+ P+ ++ +L+R+F
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSF------------NILIRSFA 165
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
+ ++AV M+++ + L CLC G + A V ++ ++ P
Sbjct: 166 RTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDR 225
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
T ++ + + + + +F M K P+ N M+ ++ +A ++ +
Sbjct: 226 ALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN 285
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
P E TY ++ + A E E +++ MA SG + +
Sbjct: 286 ML-------------AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVI 332
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKA 603
+ L+ +++G+ FD ++EAG P + T M+ N+E+A
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 121/325 (37%), Gaps = 41/325 (12%)
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRI 250
G ++ GL G +A + + K D + Y L+ L ++ R + R
Sbjct: 507 GLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATT---YNILINGLCRS-RENRVERA 562
Query: 251 FNLM--LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR----------------- 291
F L+ LE PD Y + + L ++G + VK++E
Sbjct: 563 FALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTG 622
Query: 292 ---QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
Q R ++ ++ PD Y ++N + + + F ++ G KP+
Sbjct: 623 LCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPT 682
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG-VVGTASVYYELACCLC 407
ATY LV+A G ++EA +M RG +VG+ +Y L C
Sbjct: 683 VATY------------TALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFC 730
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNI 466
+ A+ + E + S R + P +T L + G + + Q M P+
Sbjct: 731 KALKVDAALKLFEDMIS-RGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHA 789
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEE 491
T A+L ++D K +L +E
Sbjct: 790 ATFTAILDGLRKSDESGKLLKLVQE 814
>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
Length = 1305
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 94/463 (20%), Positives = 180/463 (38%), Gaps = 64/463 (13%)
Query: 170 MTAKNW----KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDL 225
+ + NW K R+M SG + M+KLL+ +K + Q + +V L + ++
Sbjct: 602 LQSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNV 661
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLM------------------------------L 255
+ L+ + + G+ + ++FN M +
Sbjct: 662 S---MCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEM 718
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
E C L PDI ++S+ L ++ + +++R++ K + V EP LV
Sbjct: 719 ETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLV 778
Query: 316 VYNAVLNACVPSHQ-WKGVF---WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
++ V +Q W V+ + K+G P A M+ L+
Sbjct: 779 KLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGL 838
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
G + EA A + ME+ G+ A + L G+ + A+ VV K+K +P
Sbjct: 839 SYTGLLKEAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKK-NGVEPN 897
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+++T ++ G+ + + IF M++ PN T++++L++ + KE+
Sbjct: 898 VVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHS 957
Query: 491 ETTRANSSGYTFLSGDG--APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
+ N L+ D A D Y S L+++A ++ K +A C +
Sbjct: 958 FCLKNN------LTRDAHVATALVDMYAKSGDLQSAAEI----FWGIKNKPLASWNCMI- 1006
Query: 549 QTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + G F+++LEAG P + FT +L
Sbjct: 1007 ---MGYAMFRRGEEGIA-----VFNAMLEAGIEPDAITFTSVL 1041
>gi|255661038|gb|ACU25688.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 375
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/418 (20%), Positives = 163/418 (38%), Gaps = 63/418 (15%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
++G A R++N M E+ + PD Y+++ +VG +K +L E M +K S+ +
Sbjct: 2 ESGDXDGAERVYNEMAEN-KVSPDAVVYNAMLNGYFRVGRIKNCFELWELMGRKGSRNVA 60
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+ +N ++ + + V +++ + ++G + TYG
Sbjct: 61 S----------------FNIMMRGLFDNGEVDQVISIWELMIENGFGEDSITYG------ 98
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
+LV + G N+++ + E +G V A Y + LC + +A+ V+
Sbjct: 99 ------ILVDGLCKNGYANKSLHVLEIAEGKGGVLDAFSYSAMINGLCKEAKLDEAVSVL 152
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRN 479
+ KP + LI + +D +F+ M HC PNI T N ++ +
Sbjct: 153 SGMVK-NGCKPNTHVYNALINGFVGASKFEDATRVFREMGTHCSPNIVTYNTLINGLCKG 211
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
+ F +A +L +E G+ KP TYS +++ H+ + ++
Sbjct: 212 ERFGEAYDLVKEMLE---KGW----------KPGVSTYSLLMKGLCLGHKLDMAINLWNQ 258
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
+ G + D H L+ GK L + ++ P+ + + ++
Sbjct: 259 VIAKGFKPDVQMHNILIHGLCSVGKTQLALSLYFNMNXWNCAPNLVTYNTLM------EG 312
Query: 600 YEKAVALINAMAYAPFHITERQWTELFESN--EDRISRDKLEKLLNALCNCNAASSEI 655
+ K L NA+A W + + D IS + L LC+CN S I
Sbjct: 313 FYKDGDLRNALAI---------WAHILRNGLQPDIISYN---ITLKGLCSCNRISGAI 358
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 103/554 (18%), Positives = 204/554 (36%), Gaps = 108/554 (19%)
Query: 125 NWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQS 184
++D V D+F + E R L++ L + + M +
Sbjct: 158 GLCVEDRVSEALDFFHQMFE----TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213
Query: 185 GLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
GL T+ ++ G+ KG A+++L + + + + +Y+ ++ L K GR
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVS--HIIPNVVIYSAIIDSLCKDGRH 271
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
+A +F M E ++PD+ Y+S+ V G + +L++ M + RK
Sbjct: 272 SDAQNLFTEMQEK-GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM----------LERK 320
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY----- 359
+ PD+V YNA++NA V ++ ++ ++ G+ P+ TY ++ +
Sbjct: 321 -----ISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 375
Query: 360 -------------RRC-----LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
+ C L+ + +I++ + + M +RG+V Y
Sbjct: 376 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 435
Query: 402 L-----------------------ACC------------LCNNGRWQDAMLVVEKIKSLR 426
L C LC+NG+ +DA+ E K+++
Sbjct: 436 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL---EMFKAMQ 492
Query: 427 HSK-------------PLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAML 473
SK P +T+ LI ++ G + +++ M P+ G V +
Sbjct: 493 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM-----PHRGIVPDTI 547
Query: 474 KVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF 533
S D K L E T F+S P+ T+++++ A + +
Sbjct: 548 TYSSMIDGLCKQSRLDEATQ-------MFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 600
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 593
++ M G D + L+ + G + F ++ +G P + ML
Sbjct: 601 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660
Query: 594 AIVQSNYEKAVALI 607
+ E+AVA++
Sbjct: 661 FWSKEELERAVAML 674
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 152/389 (39%), Gaps = 54/389 (13%)
Query: 191 GQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRI 250
G+ LKL G + A +D + R L S + KL+ ++ + RP + +
Sbjct: 45 GESLKLQSGFHEIKGLEDA---IDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISL 101
Query: 251 FNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVL 310
+ M E + DI +++ L+K + P + K L
Sbjct: 102 YQKM-ERKQIRCDIYSFNI-------------LIKCFCSCSKLPFAL--STFGKITKLGL 145
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
PD+V + +L+ + F Q+ ++ +P+ T+ L+
Sbjct: 146 HPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTF------------TTLMNG 193
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
EG+I EAVA + M + G+ T Y + +C G A+ ++ K++ + H P
Sbjct: 194 LCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIP 253
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+ ++ +I S G D ++F M++ P++ T N+M+ + + +S A++L
Sbjct: 254 NVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLL 313
Query: 490 EETTRANSS----------------GYTF----LSGDGAP--LKPDEYTYSSMLEASATA 527
+E S G F L + P + P+ TY+SM++
Sbjct: 314 QEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 373
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ + E ++ MA GC D L+
Sbjct: 374 DRLDAAEDMFYLMATKGCSPDVFTFTTLI 402
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/332 (18%), Positives = 133/332 (40%), Gaps = 30/332 (9%)
Query: 282 ELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR 341
+L+ ++ RM ++P I ++++K + D+ +N ++ + F ++
Sbjct: 84 KLMGVVVRM-ERPDLVI-SLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKIT 141
Query: 342 KSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYE 401
K GL P T+ L+ E +++EA+ M + +
Sbjct: 142 KLGLHPDVVTF------------TTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTT 189
Query: 402 LACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD- 460
L LC GR +A+ +++++ +P +IT+ ++ G +++ + M++
Sbjct: 190 LMNGLCREGRIVEAVALLDRMME-DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEV 248
Query: 461 -HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSS 519
H PN+ +A++ ++ S A+ LF E + PD +TY+S
Sbjct: 249 SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG-------------IFPDLFTYNS 295
Query: 520 MLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAG 579
M+ ++ +W E + + M D + L+ + GK +D +L G
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRG 355
Query: 580 EIPHPLFFTEMLIQAIVQSNYEKAVALINAMA 611
IP+ + + M+ Q + A + MA
Sbjct: 356 IIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 387
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/470 (18%), Positives = 184/470 (39%), Gaps = 87/470 (18%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
+A+A L++ + + ++ + M + ++ + ++KG+ G A +++
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+ + ++ +YT L+ + R +A+R+ M E + PDI Y+S+ +
Sbjct: 441 KEMIASGCRPNV---VIYTTLIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSLIIG 496
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGV 333
L + + E + M + L+P+ Y A ++ + + ++
Sbjct: 497 LSKAKRMDEARSFLVEMVENG---------------LKPNAFTYGAFISGYIEASEFASA 541
Query: 334 FWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
K++R+ G+ P+ + L L+ + ++ K+ EA +A R+M +G++
Sbjct: 542 DKYVKEMRECGVLPN------------KVLCTGLINEYCKKEKVIEACSAYRSMVDQGIL 589
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
G A Y L L N + DA + +++ + P ++ LI G++ S
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRG-KGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 454 IFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
IF M ++ PN+ N +L + R+ KAKEL +E + L P
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG-------------LHP 695
Query: 513 DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAF 572
+ TY ++++ + L EA R F
Sbjct: 696 NAVTYCTIIDGYCKSGD--------------------------LAEAFRL---------F 720
Query: 573 DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN------AMAYAPFH 616
D + G +P +T ++ ++ E+A+ + A + APF+
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFN 770
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/403 (20%), Positives = 150/403 (37%), Gaps = 66/403 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
YT L+ L K + +A IF M + PD+ +Y + ++G +++ + + M
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREM-RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
++ L P++++YN +L S + + + ++ GL P+A
Sbjct: 654 VEEG---------------LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACCLCN 408
TY ++ Y + G + EA M+ +G+V + VY L CC N
Sbjct: 699 TYCTIIDGY------------CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-----E 463
+ + K + P F LI G + + + D +
Sbjct: 747 DVERAITIFGTNKKGCASSTAP----FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN-----------SSGY-----------T 501
PN T N M+ + AKELF + AN +GY
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 502 FLSGDGAPLKPDEYTYSSMLEA----SATAHQWEYFEYVYKGMAL-SGCQLDQTKHAWLL 556
F A ++PD YS ++ A T + ++ A+ GC+L + LL
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
++ G+ + E ++++ IP E++ ++ + SN
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 70/390 (17%), Positives = 148/390 (37%), Gaps = 45/390 (11%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
++Y + ++ K G +A +F+ M+ L P AY S+ + +++ +L+
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIAS-GLIPQAQAYASLIEGYCREKNVRQGYELLV 406
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M+++ + V+ P Y V+ S G + + K++ SG +P+
Sbjct: 407 EMKKR-------------NIVISP--YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
Y L++ F + + +A+ ++ M+++G+ Y L L
Sbjct: 452 VVIY------------TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 409 NGRWQDAM-LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNI 466
R +A +VE +++ KP T+ I ++ + M++ PN
Sbjct: 500 AKRMDEARSFLVEMVEN--GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 467 GTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
++ Y + + +A S Y + G + D TY+ ++
Sbjct: 558 VLCTGLINEYCKKEKVIEA-----------CSAYRSMVDQG--ILGDAKTYTVLMNGLFK 604
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
+ + E +++ M G D + L+ S+ G FD ++E G P+ +
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664
Query: 587 FTEMLIQAIVQSNYEKAVALINAMAYAPFH 616
+ +L EKA L++ M+ H
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
>gi|27545040|gb|AAO18446.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|108711829|gb|ABF99624.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 863
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 126/354 (35%), Gaps = 81/354 (22%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G+ GR +F M + PD A Y+ + G G KE+V+L +
Sbjct: 353 TYRVLLDLYGRQGRFDGVRELFREM--RTTVPPDTATYNVLFRVFGDGGFFKEVVELFQD 410
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +H + +EPD+ V+ AC + V + G+ P+A
Sbjct: 411 M----------LHSE-----VEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTA 455
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
Y LV A EA A M + G + T Y LA
Sbjct: 456 KAY------------TGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKG 503
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD--------- 460
G +Q+A + ++ + + + +F LI + G +DD + + M+
Sbjct: 504 GLFQEAEAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERS 563
Query: 461 -------HC--------------------EPNIGTVNAMLKVYSRNDMFSKAKELFEE-- 491
+C P+I ML +Y+RND ++ A +L EE
Sbjct: 564 LEGVLNAYCIAGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMK 623
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
T RA+S+ A + EY S W+ EYV L GC
Sbjct: 624 TNRASSTHQVI-----ASMIKGEYDDDS---------NWQMVEYVLDNSNLEGC 663
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/309 (18%), Positives = 108/309 (34%), Gaps = 35/309 (11%)
Query: 310 LEPDLVVYNAVLNAC-------VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
+ P YN VL AC VP G+F + ++P TY + +
Sbjct: 200 VAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDPSPSVRPDLTTYNTLLAAAAVR 259
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
L +++ +R M + GV+ + Y + G + ++
Sbjct: 260 ALS------------DQSEMLLRTMLEAGVLPDTASYRHIVDAFAGAGNLSRVAELFAEM 307
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDM 481
+ H+ P + GL+ + G + +++ + M+ D C P T +L +Y R
Sbjct: 308 SATGHT-PDPSAYLGLMEAHTLVGATAEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGR 366
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
F +ELF E + PD TY+ + ++ +++ M
Sbjct: 367 FDGVRELFREMRTT--------------VPPDTATYNVLFRVFGDGGFFKEVVELFQDML 412
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 601
S + D ++V R G D + G +P +T ++ + YE
Sbjct: 413 HSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTGLVEALGHAAMYE 472
Query: 602 KAVALINAM 610
+A N M
Sbjct: 473 EAYVAFNMM 481
>gi|422292736|gb|EKU20038.1| hypothetical protein NGA_2025410 [Nannochloropsis gaditana CCMP526]
gi|422295019|gb|EKU22318.1| hypothetical protein NGA_2025420 [Nannochloropsis gaditana CCMP526]
Length = 527
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 150/389 (38%), Gaps = 43/389 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+K G K +A+ V+ + L DL + + K RP E LR+F +
Sbjct: 56 LIKAYGMKKQADKALEVVRMMLELGVAPDLVT---LNAAMDACEKGKRPEEVLRLFREEV 112
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
L PDI +Y + G+ G L E + L E + LEP+L
Sbjct: 113 PRHGLVPDIFSYTVLVNMYGKRGELAEALALFE---------------EAVACGLEPELP 157
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y A++ A V + +++ SGL P A Y + + + R W
Sbjct: 158 AYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTK-------RLEW--- 207
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
++A+ +R ME +G+V Y L CL + + + A + +++ H KP +
Sbjct: 208 --SKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELY 265
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
+ + G ++IF+ M ++ +PN+ T A+++ + R A + +E R
Sbjct: 266 SLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRR 325
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
L D + L+ E E + + M SG L+ +
Sbjct: 326 KPG------------LARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQ 373
Query: 555 LLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
L A R+G+ L +L E +P+
Sbjct: 374 YLRGAMRSGRYELALQILSALFEKRLLPN 402
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 151/377 (40%), Gaps = 52/377 (13%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
LLA L A R A + F L + PDI +++V L ++G L+ K
Sbjct: 162 LLAGLVGAKRVDLAEKAFRSALRR-RVSPDIYTFNTVISGLCRIGQLR-----------K 209
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWV---FKQLRKSGLKPSAA 350
K++ K W L P + YN++++ ++ V K++ ++G+ P+A
Sbjct: 210 AGDVAKDI--KAWG--LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAV 265
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG 410
T+G VL+ + + AV M+Q+G+ + Y L LC+ G
Sbjct: 266 TFG------------VLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313
Query: 411 RWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTV 469
+ ++ + ++E+++ L S P EITF ++ G + D M + + EP++
Sbjct: 314 KVEEGVKLMEEMEDLGLS-PNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIY 372
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
N ++ VY R A + E + S P+ TY+ ++ + +
Sbjct: 373 NILIDVYRRLGKMEDAMAVKEAMAKKGIS-------------PNVTTYNCLITGFSRSGD 419
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
W + M G + D + L+ G+ D + E G P+ L +
Sbjct: 420 WRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNT 479
Query: 590 MLIQAI-----VQSNYE 601
+IQ ++S YE
Sbjct: 480 -IIQGFCDKGNIKSAYE 495
>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
Length = 484
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 134/320 (41%), Gaps = 46/320 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y+ L+ L +A R A++++++MLE N D AY+++A + + E +++++
Sbjct: 184 FTYSTLVHGLCQAERLEAAIKVYDMMLEA-NYDGDAGAYNAMADGFCKERRVDEALEVLK 242
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKP 347
M Q+ K P +V YN ++N C ++ + + +F+Q+ S P
Sbjct: 243 TMIQRGCK---------------PSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPP 287
Query: 348 SAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
+A TYG ++ + ++ + + M + G+ Y+ L
Sbjct: 288 NAVTYG------------TMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFV 335
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG--GHIDDCISIFQHMKDH-CEP 464
+ +A +++ + H P +T LI +D+ + +FQ+MKD P
Sbjct: 336 KVRKLDEAKSILQD-AARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWP 394
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
N+ T N +L+ + F +A ++F+E + S P+ T+ M
Sbjct: 395 NVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCS-------------PNRMTFKVMTMGM 441
Query: 525 ATAHQWEYFEYVYKGMALSG 544
+ + FE ++ M G
Sbjct: 442 IHCGKTDKFERIFMDMVYKG 461
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 110/302 (36%), Gaps = 51/302 (16%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVA---VTLGQVGLLKEL 283
S + +T ++ P A R M + PD+ AY+ V LG+VG + L
Sbjct: 78 SLYSFTIIIQCFCNVRNPGRAWRYLGYM-RSLGIPPDVTAYNVVLKGYCDLGRVG--RAL 134
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
+K K K K P++ YN V+N + +F +L
Sbjct: 135 IKF-----GKMGKTCK------------PNVATYNTVINGLCKFGKIDWAVHLFTRLPHD 177
Query: 344 GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
+ P TY LV + ++ A+ M + G A Y +A
Sbjct: 178 LVDPDGFTY------------STLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMA 225
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMD-GGHIDDCISIFQHM-KDH 461
C R +A+ V++ + R KP +T+ +I I++ +FQ M
Sbjct: 226 DGFCKERRVDEALEVLKTMIQ-RGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSD 284
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
C PN T M+ S+ + ELF+ ++A L PD Y Y S++
Sbjct: 285 CPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAG-------------LSPDGYAYHSLI 331
Query: 522 EA 523
A
Sbjct: 332 YA 333
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 98/483 (20%), Positives = 188/483 (38%), Gaps = 129/483 (26%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVR-IMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
K WR E ++ DR+ + K +FV +++ + T ++K +G + SW
Sbjct: 152 KDWR---ERVKYFTDRI----LGLKQDQFVADVLDDRKVQMTPTDFCFVVKSVGQE-SWH 203
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A V +W+ L+ +R + T +LA+LGKA + A+ +F
Sbjct: 204 RAFEVYEWL-NLRHWYSPNARMLST-ILAVLGKANQEPLAVEVFT--------------- 246
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
R +PS +E + VYNA++ S
Sbjct: 247 -----------------------RAEPS--------------VENTVKVYNAMMGVYARS 269
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
++ V +F +R+ G +P ++ L+ A + G++ +A
Sbjct: 270 GKFNKVQELFDLMRERGCEPDLVSF------------NTLINARLKAGEMTPNLA----- 312
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS--KPLEITFTGLIISSMDG 445
+E + +R S +P IT+ LI +
Sbjct: 313 -------------------------------IELLTEVRRSGLRPDIITYNTLISACSRA 341
Query: 446 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
++++ +++F M HCEP++ T NAM+ VY R + KA++LF + S G+
Sbjct: 342 SNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDL---ESRGFF--- 395
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
PD +Y+S L A A E + + + M G D+ + ++ + G+
Sbjct: 396 -------PDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQ 448
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVALINAMAYAPFHITERQWT 623
L + + +G P + +T +LI ++ ++N E+A +++ M T R ++
Sbjct: 449 NDLALQLYRDMKSSGRNPDVITYT-VLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYS 507
Query: 624 ELF 626
L
Sbjct: 508 ALI 510
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 139/352 (39%), Gaps = 61/352 (17%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
S +Y ++ + K G P A + +L D + +I+ Y V G++ L ++ +
Sbjct: 743 SECLYQSMMLLYCKMGFPETAHHLIDLTETDGTVLNNISVYVDVIEAYGRLKLWQKAESV 802
Query: 287 IERMRQKPSKRIKNMHRKNWDPVLE------------------------PDLVVYNAVLN 322
MRQ ++RK W+ ++E P + N +L
Sbjct: 803 AGNMRQS----CITVNRKVWNALIEAYAASGCYERARAVFNTMMKDGPSPTVDSINGLLQ 858
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVA 382
A + + + ++ V ++L+ G K S ++ L ++++ R G I E
Sbjct: 859 ALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARA------------GNIFEVKK 906
Query: 383 AVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISS 442
M+ G + +Y +A LC + +D ++ +++ L I + L +
Sbjct: 907 IYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYV 966
Query: 443 MDGGHIDD---CISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
IDD I+Q +K D EP+ T N ++ +Y R+ + L +E
Sbjct: 967 A----IDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVG-- 1020
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
L+P TY S++ + E E +++ + +GC+LD++
Sbjct: 1021 -----------LEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRS 1061
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 53/285 (18%), Positives = 112/285 (39%), Gaps = 32/285 (11%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
+L +AG E +I++ M + +P + Y +A L + ++++ ++ M +
Sbjct: 891 MLDAFARAGNIFEVKKIYHGM-KAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEA 949
Query: 294 PSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
K PDL ++N+VL V ++ +++++++ GL+P TY
Sbjct: 950 GFK---------------PDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTY- 993
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
+L+ + + + E + + M G+ Y L +
Sbjct: 994 -----------NILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVE 1042
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAM 472
A + E+++S + I G H +F MKD EP I T++ +
Sbjct: 1043 QAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSH-SKAQRLFSMMKDEGVEPTIATMHLL 1101
Query: 473 LKVYSRNDMFSKAKELFE--ETTRANSSGYTFLSGDGAPLKPDEY 515
+ Y + +A+++ + T AN S + S A ++ +Y
Sbjct: 1102 MVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGDY 1146
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 118/295 (40%), Gaps = 44/295 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
++T ++ + + GR AL + + M +C L+ DI Y+ G+ G + K
Sbjct: 235 LFTTVIRVFAREGRLDAALSLLDEMKSNC-LHADIVLYNVCIDCFGKAGKVDMAWKFFHE 293
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
++ L PD V Y +++ ++ +F+Q+ ++ P A
Sbjct: 294 IKSHG---------------LLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCA 338
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
Y ++ + GK +EA + + + RG + + Y + CL
Sbjct: 339 YAY------------NTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKK 386
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGT 468
GR +A+ E++K + + P T+ LI G ++ + MK+ PN+ T
Sbjct: 387 GRLGEALRTFEEMK--KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMT 444
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
VN M+ D KAK+L E + + S PDE T+ S+++
Sbjct: 445 VNIMI------DRLCKAKKLDEACSIFEGMNHKICS-------PDEVTFCSLIDG 486
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 89/473 (18%), Positives = 176/473 (37%), Gaps = 93/473 (19%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
+ +++DRL + + + MN E L+ GLG +G A + +
Sbjct: 444 TVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQ- 502
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE--------------DC---- 258
+ D + + VYT L+ K GR + +IF M+ DC
Sbjct: 503 --MLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKA 560
Query: 259 ----------------NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
PD+ +Y + L + G +E +L M+++
Sbjct: 561 GETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGC------- 613
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR- 361
VL D YN ++ S + + + ++++ G +P+ TYG ++ +
Sbjct: 614 ------VL--DTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKI 665
Query: 362 ----------------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ L+ F + G+I+EA + + Q+G+ +
Sbjct: 666 DRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 725
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 458
L L +A++ + +K+L+ + P IT++ LI + +Q M
Sbjct: 726 NCLLDALVKAEEINEALVCFQNMKNLKGT-PNHITYSILINGLCRVRKFNKAFVFWQEMQ 784
Query: 459 KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYS 518
K +PN T M+ ++ ++A LFE F + G PD +Y+
Sbjct: 785 KQGLKPNTITYTTMIAGLAKAGNIAEASSLFER----------FKANGGV---PDSASYN 831
Query: 519 SMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
+++E + + + +++ + GC + TK L++A + +C LE A
Sbjct: 832 AIIEGLSYSRRAMEAYKIFEETRMKGCNI-HTKTCIALLDALQKDEC--LEQA 881
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/448 (19%), Positives = 181/448 (40%), Gaps = 57/448 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G G + +A S+L+ K + + S Y +L LGK GR EALR F M
Sbjct: 344 MIMGYGSAGKFDEAYSLLERQ---KARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMK 400
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNM------HRKNW 306
+D P+++ Y+ + L + G ++ K+ + M++ P+ N+ K
Sbjct: 401 KDAA--PNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKL 458
Query: 307 D-----------PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
D + PD V + ++++ + + +++Q+ S P+A Y
Sbjct: 459 DEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVY--- 515
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+++F++ G+ + + M RG + C+ G
Sbjct: 516 ---------TSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKG 566
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 474
+ E+IKS R P ++++ LI + G + +F MK+ C + N +
Sbjct: 567 RALFEEIKS-RGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFID 625
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
+ ++ +KA +L EE +P TY S+++ A + +
Sbjct: 626 GFCKSGKVNKAYQLLEEMKTKGR-------------QPTVVTYGSVIDGLAKIDRLDEAY 672
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQA 594
+++ +G +L+ ++ L+ + G+ + L++ G P+ ++ L+ A
Sbjct: 673 MLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN-VYTWNCLLDA 731
Query: 595 IVQSN--YEKAVALINA--MAYAPFHIT 618
+V++ E V N + P HIT
Sbjct: 732 LVKAEEINEALVCFQNMKNLKGTPNHIT 759
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 64/340 (18%), Positives = 124/340 (36%), Gaps = 62/340 (18%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+ L + + ++ M + G + + G G +A +L+ +
Sbjct: 587 ILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEE---M 643
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K K + Y ++ L K R EA +F + L ++ Y S+ G+VG
Sbjct: 644 KTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN-GLELNVVIYSSLIDGFGKVGR 702
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLE------------------------PDLV 315
+ E ++E + QK N++ W+ +L+ P+ +
Sbjct: 703 IDEAYLIMEELMQKG--LTPNVY--TWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHI 758
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
Y+ ++N ++ F +++++K GLKP+ TY ++ + G
Sbjct: 759 TYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITY------------TTMIAGLAKAG 806
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
I EA + + G V ++ Y + L + R +A + E E
Sbjct: 807 NIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFE-----------ETRM 855
Query: 436 TGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 474
G I H CI++ + KD C V A+L+
Sbjct: 856 KGCNI------HTKTCIALLDALQKDECLEQAAIVGAVLR 889
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 140/349 (40%), Gaps = 51/349 (14%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
PDI +++V L ++G L+ K K++ K W L P + YN+++
Sbjct: 189 PDIYTFNTVISGLCRIGQLR-----------KAGDVAKDI--KAWG--LAPSVATYNSLI 233
Query: 322 NACVPSHQWKGVFWV---FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKIN 378
+ ++ V K++ ++G+ P+A T+G VL+ + +
Sbjct: 234 DGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFG------------VLINGYCKNSNTA 281
Query: 379 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
AV M+Q+G+ + Y L LC+ G+ ++ + ++E+++ L S P EITF +
Sbjct: 282 AAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS-PNEITFGCV 340
Query: 439 IISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
+ G + D M + + EP++ N ++ VY R A + E +
Sbjct: 341 LKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGI 400
Query: 498 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 557
S P+ TY+ ++ + + W + M G + D + L+
Sbjct: 401 S-------------PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447
Query: 558 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI-----VQSNYE 601
G+ D + E G P+ L + +IQ ++S YE
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNT-IIQGFCDKGNIKSAYE 495
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 80/180 (44%), Gaps = 29/180 (16%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y L+ L +A RP +A +F M C L PDI AY ++ + G L E++ L + M
Sbjct: 218 YNTLIKALCQALRPRDAQVLFRKMCA-CGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEM 276
Query: 291 RQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAA 350
+++ +++PDLVVY ++N S + K V +L GLKP
Sbjct: 277 QRR---------------LVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVH 321
Query: 351 TYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV-GTASVYYELACCLCNN 409
TY LV EG I EA+ R ME+ G + G+ S L CL +N
Sbjct: 322 TY------------TALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHN 369
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 102/246 (41%), Gaps = 27/246 (10%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+V N+++ + V +F + GLKP +Y + + +
Sbjct: 143 PDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSY------------SIFINGY 190
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ KI+EA+ M RGVV A Y L LC R +DA ++ K+ + S P
Sbjct: 191 CKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLS-PD 249
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ ++ L+ G++D+ + +FQ M+ +P++ ++ R+ AKE+
Sbjct: 250 ILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVL- 308
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+R G LKPD +TY+++++ +++ M GC
Sbjct: 309 --SRLIVEG----------LKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSC 356
Query: 551 KHAWLL 556
+ LL
Sbjct: 357 SYNVLL 362
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/247 (19%), Positives = 104/247 (42%), Gaps = 27/247 (10%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+P ++ +N +L++ V +++ V +FK++ G+K Y C L +L+
Sbjct: 37 QPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIK------------YNVCTLSILINC 84
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
F ++ + +RG ++ L +C G+ + A +++++ L P
Sbjct: 85 FCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEM-GLVGCVP 143
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+T L+ G ID IF M +P++ + + + Y + + +A ELF
Sbjct: 144 DVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELF 203
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
+E + + P+ TY+++++A A + + +++ M G D
Sbjct: 204 DEMSHRG-------------VVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDI 250
Query: 550 TKHAWLL 556
++ LL
Sbjct: 251 LAYSTLL 257
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 43/267 (16%)
Query: 274 LGQVGLLKELVKLIERMRQKPSK----RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQ 329
+G VG + ++V MR S+ +++ + L+PD+ Y+ +N +
Sbjct: 136 MGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEK 195
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMES-------------YRR---CLL-------KV 366
+F ++ G+ P+A TY +++ +R+ C L
Sbjct: 196 IDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYST 255
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA-----MLVVEK 421
L+ F ++G ++E + + M++R V VY + +C + + +DA L+VE
Sbjct: 256 LLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEG 315
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK-VYSRN 479
+K H T+T L+ G I + + +F+ M +D C P + N +L+ N
Sbjct: 316 LKPDVH------TYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHN 369
Query: 480 DMFSKAKELFEETTR---ANSSGYTFL 503
D + + + E R A++ TFL
Sbjct: 370 DTSTVVQLIHEMADRGFYADAVTRTFL 396
>gi|218194011|gb|EEC76438.1| hypothetical protein OsI_14128 [Oryza sativa Indica Group]
Length = 669
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 126/354 (35%), Gaps = 81/354 (22%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y LL + G+ GR +F M + PD A Y+ + G G KE+V+L +
Sbjct: 159 TYRVLLDLYGRQGRFDGVRELFREM--RTTVPPDTATYNVLFRVFGDGGFFKEVVELFQD 216
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +H + +EPD+ V+ AC + V + G+ P+A
Sbjct: 217 M----------LHSE-----VEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTA 261
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
Y LV A EA A M + G + T Y LA
Sbjct: 262 KAY------------TGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKG 309
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD--------- 460
G +Q+A + ++ + + + +F LI + G +DD + + M+
Sbjct: 310 GLFQEAEAIFSRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERS 369
Query: 461 -------HC--------------------EPNIGTVNAMLKVYSRNDMFSKAKELFEE-- 491
+C P+I ML +Y+RND ++ A +L EE
Sbjct: 370 LEGVLNAYCIAGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMK 429
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
T RA+S+ A + EY S W+ EYV L GC
Sbjct: 430 TNRASSTHQVI-----ASMIKGEYDDDS---------NWQMVEYVLDNSNLEGC 469
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 146/391 (37%), Gaps = 72/391 (18%)
Query: 283 LVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRK 342
L+ L MR PS P + PDL YN +L A + + + +
Sbjct: 33 LLGLFAEMRHDPS------------PSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLE 80
Query: 343 SGLKPSAATYGLAMESYRRC--LLKV---------------------LVRAFWEEGKINE 379
+G+ P A+Y ++++ L +V L+ A G E
Sbjct: 81 AGVLPDTASYRHIVDAFAGAGNLSRVAELFAEMAATGHTPDPSAYLGLMEAHTRVGATAE 140
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI-TFTGL 438
AVA +R M+ G TA+ Y L GR+ V E + +R + P + T+ L
Sbjct: 141 AVAVLRQMQADGCPPTAATYRVLLDLYGRQGRFDG---VRELFREMRTTVPPDTATYNVL 197
Query: 439 IISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANS 497
DGG + + +FQ M EP+I T ++ R + A+E+ +
Sbjct: 198 FRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLD------- 250
Query: 498 SGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 557
+++ +G + P Y+ ++EA A +E + M G + L
Sbjct: 251 ----YITTEG--MVPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNAL-- 302
Query: 558 EASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHI 617
A+ K L + A EA F+ M A +Q + + ALI AY
Sbjct: 303 -ANAFAKGGLFQEA-----EA-------IFSRMTNNAAIQKDKDSFDALIE--AYCQGAQ 347
Query: 618 TERQWTELFESNEDRISRDK--LEKLLNALC 646
+ E + R + D+ LE +LNA C
Sbjct: 348 LDDAVKAYMEMRKSRFNPDERSLEGVLNAYC 378
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 111/310 (35%), Gaps = 37/310 (11%)
Query: 310 LEPDLVVYNAVLNAC-------VPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
+ P YN VL AC VP G+F + ++P TY + +
Sbjct: 6 VAPTAATYNTVLAACARATDPPVPFDMLLGLFAEMRHDPSPSVRPDLTTYNTLLAAAAVR 65
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
L +++ +R M + GV+ + Y + G + ++
Sbjct: 66 ALS------------DQSEMLLRTMLEAGVLPDTASYRHIVDAFAGAGNLSRVAELFAEM 113
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDM 481
+ H+ P + GL+ + G + +++ + M+ D C P T +L +Y R
Sbjct: 114 AATGHT-PDPSAYLGLMEAHTRVGATAEAVAVLRQMQADGCPPTAATYRVLLDLYGRQGR 172
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
F +ELF E + PD TY+ + ++ +++ M
Sbjct: 173 FDGVRELFREMRTT--------------VPPDTATYNVLFRVFGDGGFFKEVVELFQDML 218
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-Y 600
S + D ++V R G D + G +P +T L++A+ + Y
Sbjct: 219 HSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTG-LVEALGHAAMY 277
Query: 601 EKAVALINAM 610
E+A N M
Sbjct: 278 EEAYVAFNMM 287
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 146/372 (39%), Gaps = 57/372 (15%)
Query: 176 KFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLL 235
+ +R ++ SGL+ + GL G + +AM +L+ L +K S + ++
Sbjct: 418 RLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLE---NLLEKGIPPSVVAFNSII 474
Query: 236 AILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK-- 293
A G AG A + +M++ L P + S+ ++L + G L E + M K
Sbjct: 475 AAYGNAGLEERAFYAYGIMVK-FGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGF 533
Query: 294 PSKRIK--------------NMHRKNWDPV----LEPDLVVYNAVLNACVPSHQWKGVFW 335
P + NM W+ + + PD V + A +N S +
Sbjct: 534 PVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYD 593
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
VF + + G P+ Y L+ F + GK+NEA+ VR M +RG++
Sbjct: 594 VFSDMLRKGFVPNNFVY------------NSLIGGFCKVGKLNEALKLVREMNKRGLLPD 641
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI---ISSMDGGHIDDCI 452
+ C LC GR + A+ + + S P +T+ LI + D G DD
Sbjct: 642 IFTVNMIICGLCKQGRMKLAIETFMDMCRMGLS-PDIVTYNTLIDGYCKAFDVGGADD-- 698
Query: 453 SIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 511
+ M D EP++ T N + Y ++A + EE +
Sbjct: 699 -LMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVG-------------IV 744
Query: 512 PDEYTYSSMLEA 523
P+ TY++M+ A
Sbjct: 745 PNTVTYNTMINA 756
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 28/184 (15%)
Query: 225 LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ + FVY L+ K G+ +EAL++ M + L PDI + + L + G +K +
Sbjct: 604 VPNNFVYNSLIGGFCKVGKLNEALKLVREMNKR-GLLPDIFTVNMIICGLCKQGRMKLAI 662
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+ +M R L PD+V YN +++ + G + ++ SG
Sbjct: 663 E-----------TFMDMCRMG----LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSG 707
Query: 345 LKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
+P TY + + Y C ++ KIN AV + + G+V Y +
Sbjct: 708 WEPDLTTYNIRIHGY--CTVR----------KINRAVMILEELISVGIVPNTVTYNTMIN 755
Query: 405 CLCN 408
+CN
Sbjct: 756 AVCN 759
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/376 (18%), Positives = 155/376 (41%), Gaps = 71/376 (18%)
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVP 326
+ SV QVGL + V++ R+++ +P + +YN VL+ +
Sbjct: 113 FISVISVYRQVGLAERAVEMFYRIKEFGC---------------DPSVKIYNHVLDTLLG 157
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRN 386
++ + ++ V++ +++ G +P+ TY VL++A + K++ A +
Sbjct: 158 ENRIQMIYMVYRDMKRDGFEPNVFTY------------NVLLKALCKNNKVDGAKKLLVE 205
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL--------------------- 425
M +G A Y + +C G ++ + E+ + +
Sbjct: 206 MSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGV 265
Query: 426 --------RHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLK-V 475
+ P I+++ LI + G I+ S+ Q +K C PNI T+++++K
Sbjct: 266 ELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGC 325
Query: 476 YSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEY 535
+ R F A +++ + R G L+P+ Y+++++ + +
Sbjct: 326 FVRGTTFD-ALDMWNQMIR------------GFGLQPNVVAYNTLVQGFCSHGNIDKAVS 372
Query: 536 VYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAI 595
V+ M GC + + L+ ++ G + ++ +L +G P+ + +T M+
Sbjct: 373 VFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALC 432
Query: 596 VQSNYEKAVALINAMA 611
S +++A +LI M+
Sbjct: 433 RHSKFKEAESLIEIMS 448
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 85/436 (19%), Positives = 165/436 (37%), Gaps = 60/436 (13%)
Query: 178 VRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYG-------LKDKRDLK---- 226
+ + Q GL +M +K G S + VLD + G RD+K
Sbjct: 117 ISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGF 176
Query: 227 --SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELV 284
+ F Y LL L K + A ++ + + + P+ +Y +V ++ +VG++KE
Sbjct: 177 EPNVFTYNVLLKALCKNNKVDGAKKLL-VEMSNKGCCPNAVSYTTVISSMCEVGMVKEGR 235
Query: 285 KLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG 344
+L ER EP + VYNA++N +KG + ++ + G
Sbjct: 236 QLAER--------------------FEPVVSVYNALINGLCKERDYKGGVELMSEMVEKG 275
Query: 345 LKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELAC 404
+ P+ +Y L+ G+I A + + M +RG L
Sbjct: 276 ISPNVISY------------STLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVK 323
Query: 405 CLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCE 463
G DA+ + ++ +P + + L+ G+ID +S+F HM++ C
Sbjct: 324 GCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCS 383
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
PNI T +++ +++ A ++ + + P+ Y+SM+EA
Sbjct: 384 PNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCC-------------PNVVVYTSMVEA 430
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPH 583
+++ E + + M+ C + AG+ E F + + P
Sbjct: 431 LCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPP 490
Query: 584 PLFFTEMLIQAIVQSN 599
+ L+ + ++N
Sbjct: 491 NIVTYNELLDGLAKAN 506
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 51/272 (18%), Positives = 99/272 (36%), Gaps = 70/272 (25%)
Query: 242 GRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM 301
G +AL ++N M+ L P++ AY+++ G + + V + M +
Sbjct: 329 GTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGC------ 382
Query: 302 HRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR 361
P++ Y +++N +G +++ ++ SG P+ Y +E+
Sbjct: 383 ---------SPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEA--- 430
Query: 362 CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEK 421
LC + ++++A ++E
Sbjct: 431 --------------------------------------------LCRHSKFKEAESLIE- 445
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH--CEPNIGTVNAMLKVYSRN 479
I S + P TF I D G +D +F+ M+ C PNI T N +L ++
Sbjct: 446 IMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKA 505
Query: 480 DMFSKA----KELFEETTRANSSGY-TFLSGD 506
+ +A +E+F ++S Y T L G
Sbjct: 506 NRIEEAYGLTREIFMRGVEWSTSTYNTLLHGS 537
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/408 (18%), Positives = 158/408 (38%), Gaps = 83/408 (20%)
Query: 127 VLDDDVQLGSDYFAKNVEWHPEKR-WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSG 185
V+ DV G + + W +KR ++ + L+ L E + WK ++ M +S
Sbjct: 96 VMKTDV--GVNVKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSP 153
Query: 186 L-MFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRP 244
+ + T ++ ++++ LG+ +A+++ Y +K ++ + Y ++ +L G+
Sbjct: 154 ICVVTPMELSQVIRMLGNAKMIGKAITIF---YQIKARKCQPTAQAYNSMIIMLIHEGQY 210
Query: 245 HEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRK 304
+ ++N M + + +PD Y ++ ++G RQ + R+ N ++
Sbjct: 211 EKVHELYNEMSNEGHCHPDTVTYSALISAFCKLG------------RQDSAIRLLNEMKE 258
Query: 305 NWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL 364
N ++P +Y +++ G +F+++R +P TY
Sbjct: 259 NG---MQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTY------------ 303
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
L+R + G+I+EA M++
Sbjct: 304 TELIRGLGKAGRIDEAYHFYHEMQR----------------------------------- 328
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFS 483
KP + +I G +DD + +F+ M HC PN+ T N ++K
Sbjct: 329 -EDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKA-------- 379
Query: 484 KAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
LFE +R + F G+ + P +TYS +++ ++ E
Sbjct: 380 ----LFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIE 423
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/402 (19%), Positives = 155/402 (38%), Gaps = 46/402 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+YT ++++ K H AL +F M C PD+ Y + LG+ G + E
Sbjct: 267 IYTMIISLFFKLDNVHGALSLFEEMRYMYCR--PDVFTYTELIRGLGKAGRIDEAYHFYH 324
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M+++ K PD VV N ++N + + +F+++ S P+
Sbjct: 325 EMQREDCK---------------PDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPN 369
Query: 349 AATYGLAMESYRRCLLKVLVRAFWE-EGKINEAVAAVRNMEQRGVVGTASVYYELACCLC 407
TY +++A +E + +++E + M+ G+ + Y L C
Sbjct: 370 VVTY------------NTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFC 417
Query: 408 NNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIG 467
R + AM+++E++ + P + LI + D +FQ +K++C +
Sbjct: 418 KTNRIEKAMMLLEEMDE-KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSA 476
Query: 468 TVNA-MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASAT 526
V A M+K + A LF+E ++ + P+ Y Y++++ A
Sbjct: 477 RVYAVMIKHLGKAGRLDDAINLFDEMSKLGCT-------------PNVYAYNALMSGLAR 523
Query: 527 AHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLF 586
A + + M GC D + +L ++ G H ++ + P +
Sbjct: 524 ACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVS 583
Query: 587 FTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
+ +L +E+A L+ M F ++ + E+
Sbjct: 584 YNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEA 625
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 97/236 (41%), Gaps = 15/236 (6%)
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
L ++R I +A+ ++ R TA Y + L + G+++ + ++
Sbjct: 162 LSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMS 221
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMF 482
+ H P +T++ LI + G D I + MK++ +P ++ ++ + D
Sbjct: 222 NEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNV 281
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMAL 542
A LFEE Y + +PD +TY+ ++ A + + + Y M
Sbjct: 282 HGALSLFEEMR------YMY-------CRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQR 328
Query: 543 SGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQS 598
C+ D ++ +AG+ F+ + + IP+ + + +I+A+ +S
Sbjct: 329 EDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNT-IIKALFES 383
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 86/219 (39%), Gaps = 24/219 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
+L+D + K + M++ G L+ LG + A + L
Sbjct: 411 ILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQ---EL 467
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
K+ S VY ++ LGKAGR +A+ +F+ M P++ AY+++ L + +
Sbjct: 468 KENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEM-SKLGCTPNVYAYNALMSGLARACM 526
Query: 280 LKELVKLIERMRQKPS--------------------KRIKNMHRKNWDPVLEPDLVVYNA 319
L E + + +M++ R M + ++PD V YN
Sbjct: 527 LDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNT 586
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMES 358
VL+A + ++ + K++ G + TY +E+
Sbjct: 587 VLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEA 625
>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like, partial [Glycine max]
Length = 594
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 134/354 (37%), Gaps = 84/354 (23%)
Query: 235 LAILGKAGRPHEALRIFN--LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
LA A +PH A ++F L+ D+ Y+++ L G + E +++ + M
Sbjct: 106 LAAYVHANQPHLAFQLFQNELIXXXXXXSIDVWTYNTLVKGLCDEGKIDEAIRVRDEMES 165
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLR----KSGLKPS 348
L PD+V YN +++ C +W+G F+ L + G++P+
Sbjct: 166 LK---------------LIPDVVTYNTLIDGCF---KWRGSTEGFRLLEEMKSRGGVEPN 207
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
A T+ ++V+ F +EGKINEA AV M + GV Y + C
Sbjct: 208 AVTHN------------IMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCK 255
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 468
G+ +A +++ E+ GL +P+I T
Sbjct: 256 AGKLGEAFRMMD-----------EMARKGL------------------------KPDICT 280
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
+N ML M K +E +E T +A GY DE TY +++
Sbjct: 281 LNTMLHTLC---MEKKPEEAYELTVKARKRGYIL----------DEVTYGTLIMGYFKGK 327
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
Q + +++ M G + L+ +GK + LLE G +P
Sbjct: 328 QEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVP 381
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 159/397 (40%), Gaps = 69/397 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+KGL D+G +A+ V D + LK D+ Y L+ K E R+ M
Sbjct: 143 LVKGLCDEGKIDEAIRVRDEMESLKLIPDV---VTYNTLIDGCFKWRGSTEGFRLLEEMK 199
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ ++ + G+ G + E + +M + + PD
Sbjct: 200 SRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESG---------------VSPDCF 244
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT-----------------YGLAMES 358
YN ++N + + F + ++ + GLKP T Y L +++
Sbjct: 245 TYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKA 304
Query: 359 YRRCLL------KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
+R + L+ +++ + ++A+ M++RG+V + Y L LC +G+
Sbjct: 305 RKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKT 364
Query: 413 QDAMLVVEKIKSL--RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTV 469
A V+K+ L + P E++ +I G +D M + +P+I T
Sbjct: 365 DQA---VDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTR 421
Query: 470 NAMLKVYSRNDMFSKAKELFEE-TTRANS-------SGYTFLSGDG-------------- 507
N +L+ R DM KA +LF ++ NS + ++L +G
Sbjct: 422 NILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEV 481
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
+PD+YTY++++ A A + E E ++ +G
Sbjct: 482 KKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETG 518
>gi|356563451|ref|XP_003549976.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Glycine max]
Length = 714
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 125/283 (44%), Gaps = 39/283 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
Y+ +++ K +A+ F M + +L PD Y ++ ++G ++E++ L E
Sbjct: 225 ITYSTIISCAKKCNLYDKAVHWFERMYKT-SLMPDEVTYSAILDVYARLGKVEEVISLYE 283
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
R R W +PD + ++ + + + G+ +VF+++ G++P+
Sbjct: 284 RGRAT-----------GW----KPDPITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPN 328
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
Y +E+ + V R +EE M + G+V + +
Sbjct: 329 LVVYNTLLEAMGKAGKPVFARGLFEE------------MIELGIVPNEKTLTAVI-KIYG 375
Query: 409 NGRW-QDAMLVVEKIKSLRHSKPLE-ITFTGLIISSMDGGHIDDCISIFQHMKD--HCEP 464
RW +DA+ + +++K + P++ I + L+ D G +++ ++F+ MK HC+P
Sbjct: 376 KARWSRDALELWQRMK--ENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSAHCKP 433
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRA----NSSGYTFL 503
+ + AML +Y KA +LF E ++ N G+T L
Sbjct: 434 DSWSYTAMLNIYGSQGDVDKAMKLFNEMCKSGVELNVMGFTCL 476
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 15/164 (9%)
Query: 430 PLE-ITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
PL+ IT++ +I + D + F+ M K P+ T +A+L VY+R K +E
Sbjct: 221 PLDNITYSTIISCAKKCNLYDKAVHWFERMYKTSLMPDEVTYSAILDVYAR---LGKVEE 277
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
+ R ++G+ KPD T+S + + A ++ YV++ M G Q
Sbjct: 278 VISLYERGRATGW----------KPDPITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQP 327
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ + LL +AGK F+ ++E G +P+ T ++
Sbjct: 328 NLVVYNTLLEAMGKAGKPVFARGLFEEMIELGIVPNEKTLTAVI 371
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 113/295 (38%), Gaps = 39/295 (13%)
Query: 313 DLVVYNAVLNACVPSHQW-KGVFWVFKQLRKSGLKPSAATYGLAMESYRR---------- 361
D + Y+ +++ + + K V W F+++ K+ L P TY ++ Y R
Sbjct: 223 DNITYSTIISCAKKCNLYDKAVHW-FERMYKTSLMPDEVTYSAILDVYARLGKVEEVISL 281
Query: 362 -------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
VL + F E G + + ME GV VY L +
Sbjct: 282 YERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLEAMGK 341
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIG 467
G+ A + E++ L P E T T +I D + ++Q MK++ P +
Sbjct: 342 AGKPVFARGLFEEMIEL-GIVPNEKTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFI 400
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
N +L + + + +A+ LF + ++ A KPD ++Y++ML +
Sbjct: 401 LYNTLLNMCADVGLVEEAETLFRDMKQS------------AHCKPDSWSYTAMLNIYGSQ 448
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ ++ M SG +L+ L+ RA + L F +E G P
Sbjct: 449 GDVDKAMKLFNEMCKSGVELNVMGFTCLIQCLGRATEFDDLVRVFGISVERGIKP 503
Score = 42.7 bits (99), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 30/202 (14%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VY LL +GKAG+P A +F M+E + P+ +V G+ ++ ++L +R
Sbjct: 331 VYNTLLEAMGKAGKPVFARGLFEEMIE-LGIVPNEKTLTAVIKIYGKARWSRDALELWQR 389
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSG-LKPS 348
M++ W P+ D ++YN +LN C + +F+ +++S KP
Sbjct: 390 MKE-----------NGW-PM---DFILYNTLLNMCADVGLVEEAETLFRDMKQSAHCKPD 434
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
+ +Y ++ + +G +++A+ M + GV + L CL
Sbjct: 435 SWSY------------TAMLNIYGSQGDVDKAMKLFNEMCKSGVELNVMGFTCLIQCLGR 482
Query: 409 NGRWQDAMLVVEKIKSLRHSKP 430
+ D ++ V I R KP
Sbjct: 483 ATEFDD-LVRVFGISVERGIKP 503
>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 112/516 (21%), Positives = 200/516 (38%), Gaps = 59/516 (11%)
Query: 109 KRENLRELKEMFE-----------KDLNWVLDDDVQLGSDYFAKNVEWHPEKRWRSEAEA 157
K +N+ E ++F+ KD +L V+L A ++ H EA+
Sbjct: 53 KLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADT 112
Query: 158 I--RVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
I ++++ L ++ A + + M + GL T + L+ GL +G+ QA+ + D
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADH 172
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
+ + D+ + Y L+ L K G A+ M E+ N P++ Y ++ L
Sbjct: 173 MEKMWYPLDV---YTYGVLINGLCKTGDTLAAVGWLRKM-EERNWKPNVVVYSTIMDGLC 228
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
+ GL+ E + L M K + P+LV Y ++ +WK
Sbjct: 229 KDGLVSEALNLCSEMNGKGVR---------------PNLVTYACLIQGLCNFGRWKEAGS 273
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
+ ++ K G++P +L +LV AF +EGK+ +A + + M G
Sbjct: 274 LLDEMMKMGMRPDLQ------------MLNILVDAFCKEGKVMQAKSVIGFMILTGEGPD 321
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
Y L C + +AM V + S R P + FT LI +I+ + +
Sbjct: 322 VFTYNSLIHIYCLQNKMNEAMRVFHLMVS-RGRLPDIVVFTSLIHGWCKDKNINKAMHLL 380
Query: 456 QHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDE 514
+ M K P++ T ++ + + AKELF + P+
Sbjct: 381 EEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQV-------------PNL 427
Query: 515 YTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDS 574
T + +L+ + + K M S L+ ++ LL AGK + F S
Sbjct: 428 QTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSS 487
Query: 575 LLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
L G + +T M+ Q + +KA L+ M
Sbjct: 488 LPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINM 523
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 123/341 (36%), Gaps = 73/341 (21%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY----------------- 352
+E D + N V+N F V + K GL+P+ T
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAV 167
Query: 353 GLA--MESYRRCL----LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCL 406
GLA ME L VL+ + G AV +R ME+R VY + L
Sbjct: 168 GLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGL 227
Query: 407 CNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF-QHMKDHCEPN 465
C +G +A+ + ++ + +P +T+ LI + G + S+ + MK P+
Sbjct: 228 CKDGLVSEALNLCSEMNG-KGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPD 286
Query: 466 IGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA 525
+ +N ++ + + +AK + G+ L+G+G PD +TY+S++
Sbjct: 287 LQMLNILVDAFCKEGKVMQAKSVI---------GFMILTGEG----PDVFTYNSLIHIYC 333
Query: 526 TAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
++ EA R F ++ G +P +
Sbjct: 334 LQNKMN--------------------------EAMRV---------FHLMVSRGRLPDIV 358
Query: 586 FFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 626
FT ++ N KA+ L+ M+ F WT L
Sbjct: 359 VFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLI 399
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 140/354 (39%), Gaps = 50/354 (14%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E+ W+ ++D L + + ++ MN G+ L++GL + G W+
Sbjct: 210 ERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWK 269
Query: 208 QAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAY 267
+A S+LD + + + DL+ + L+ K G+ +A + M+ PD+ Y
Sbjct: 270 EAGSLLDEMMKMGMRPDLQ---MLNILVDAFCKEGKVMQAKSVIGFMILT-GEGPDVFTY 325
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
+S+ + E +++ M + R+ PD+VV+ ++++
Sbjct: 326 NSLIHIYCLQNKMNEAMRVFHLMVSR--GRL-------------PDIVVFTSLIHGWCKD 370
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYG-------------------LAMESYRRC----LL 364
+ +++ K G P AT+ L M Y +
Sbjct: 371 KNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTC 430
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
V++ +E ++EAV+ + ME+ + +Y L +C+ G+ A E S
Sbjct: 431 AVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAW---ELFSS 487
Query: 425 LRHSKPLEI---TFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 474
L K L+I +T +I G +D + +M+++ C PN T N ++
Sbjct: 488 LP-GKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQ 540
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/418 (20%), Positives = 167/418 (39%), Gaps = 56/418 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L K +A+ +L+ ++ + D+++ + ++ L K + H+A ++ + ML
Sbjct: 259 LIHALSQKNQVSEALKLLEEMFVMGCMPDVQT---FNDVIHGLCKVNKIHDATKLVDRML 315
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN--------------- 300
YPD Y + L ++G L E K++ ++ P+ I N
Sbjct: 316 LR-GFYPDNMTYGFLLHGLCRIGKLNEARKILIKI-PCPNNAILNTLINGYVMSGQLKEA 373
Query: 301 ---MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
++ + +PD+ YN +++ + ++ + G +P+ TY
Sbjct: 374 QSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYA---- 429
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
+LV + G + EA + M RG+ + +Y L C LC + A+
Sbjct: 430 --------ILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALN 481
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVY 476
++ ++ + + KP T+ LI ID+ +F +M D N T N ++
Sbjct: 482 LLSEMCT-KGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHAL 540
Query: 477 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
R F KA L + G T D+ TY+ +++A E +
Sbjct: 541 LRRGAFQKALTLVNDML---FRGCTL----------DKITYNGLIKAFCKVGNIEKGLEL 587
Query: 537 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEML 591
Y+ M + G D ++ + GK +++AF+ L +A G +P + + +L
Sbjct: 588 YEQMIMDGLGADTISCNIMINGLCKVGK---VDNAFEFLRDAINRGFVPDIVTYNSVL 642
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 119/601 (19%), Positives = 229/601 (38%), Gaps = 103/601 (17%)
Query: 135 GSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNW---------------KFVR 179
GSD NVE P W S E + R S +T F R
Sbjct: 42 GSDPIKMNVESEPATEWESLLEPFDLTKLRKSHILITPVQLCKLLELPLDVPTLLEIFER 101
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILG 239
+ Q G T + LG G ++ +L +K++ + ++ ++ G
Sbjct: 102 VGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLL---MQMKEEGIVFRESIFMIIMKHYG 158
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
KAG+P +A+R L D+ A + T L+ E++ + Q +
Sbjct: 159 KAGQPGQAIR----------LLLDMRAVYLCEPTFKSYDLVLEIL-VTGNCPQVATNVFY 207
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+M K + P + + V+ A ++ + + + K G P++ Y
Sbjct: 208 DMLSKG----VSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVY------- 256
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
+ L+ A ++ +++EA+ + M G + + ++ LC + DA +V
Sbjct: 257 -----QTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLV 311
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRN 479
+++ LR P +T+ L+ G +++ I +K C PN +N ++ Y +
Sbjct: 312 DRML-LRGFYPDNMTYGFLLHGLCRIGKLNEARKIL--IKIPC-PNNAILNTLINGYVMS 367
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
+A+ ET + G+ +PD +TY+ ++ + +
Sbjct: 368 GQLKEAQSFLNETMI--NFGF----------QPDIFTYNILMHGLCKEGSLSFARDLVNE 415
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
M+ GC+ + +A L+ +AG LLE EAG + H + + I +++ +
Sbjct: 416 MSRRGCEPNVITYAILVNGLCKAG---LLE-------EAGLVLHEMSARGLTINSVIYN- 464
Query: 600 YEKAVALINAMA-----YAPFHITERQWT-----ELFESNE--------DRISRDKLEKL 641
LI A+ + ++ T +LF N DRI D+ +L
Sbjct: 465 -----CLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRI--DEAFRL 517
Query: 642 LNALCNCNAASSEITVSNLSRALHALCRS---EKERDLSSSAHFGSQAIDISPLHGIHEA 698
+ + A ++ +T + L +HAL R +K L + F +D +G+ +A
Sbjct: 518 FHNMLLDGAVANNVTYNTL---IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKA 574
Query: 699 F 699
F
Sbjct: 575 F 575
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 147/358 (41%), Gaps = 55/358 (15%)
Query: 137 DYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMN---QSGLMFTEGQM 193
D F N+ H + S + A R LV+ +S R + ++N ++GL+ G +
Sbjct: 389 DIFTYNILMHGLCKEGSLSFA-RDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV 447
Query: 194 LK----------------LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
L L+ L K A+++L + K DL F Y L+
Sbjct: 448 LHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDL---FTYNSLIYG 504
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L K R EA R+F+ ML D + ++ Y+++ L + G ++ + L+ M +
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVT-YNTLIHALLRRGAFQKALTLVNDMLFRGCTL 563
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
D + YN ++ A C + KG+ +++Q+ GL +
Sbjct: 564 ---------------DKITYNGLIKAFCKVGNIEKGL-ELYEQMIMDGLGADTIS----- 602
Query: 357 ESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
+++ + GK++ A +R+ RG V Y + LC GR ++A+
Sbjct: 603 -------CNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEAL 655
Query: 417 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD-CISIFQHMKDHCEPNIGTVNAML 473
+ ++++ + +P T+ I G ++D C+ ++ +++ P+ T N ++
Sbjct: 656 NLFDRLQ-VEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLV 712
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 140/346 (40%), Gaps = 46/346 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL GL G A VL L + + +R +Y L+ + G A F M
Sbjct: 346 LLNGLCKDGKVSIAEEVLQ---SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM- 401
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ ++ PD Y+++ L + + L+ M+ D + P +
Sbjct: 402 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ---------------DNGVNPTVE 446
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+N +++A + Q + F V +++++GLKP+ +YG +V AF + G
Sbjct: 447 TFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG------------SIVNAFCKNG 494
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
KI EAVA + +M + V+ A VY + +G A ++VEK+KS P +T+
Sbjct: 495 KIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS-NGISPSIVTY 553
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
LI + I + I + +H P+ + N ++ KA +L + R
Sbjct: 554 NLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ---R 610
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM 540
+ G +K TY ++ A + EY+Y+ M
Sbjct: 611 MHKYG----------IKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 646
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 128/328 (39%), Gaps = 54/328 (16%)
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+D + F Y ++A + +AGR +A+ +F+ M E L P+ Y+++ + G
Sbjct: 192 RDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVL-PNHITYNTMIDGHIKGGD 250
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L+ +L ++M L+P+ + YN +L+ + + + +
Sbjct: 251 LEAGFRLRDQMVCHG---------------LKPNAITYNVLLSGLCRAGRMGETSALLDE 295
Query: 340 LRKSGLKPSAATY-----GLAMESYRRCLLK------------------VLVRAFWEEGK 376
+ + P TY GL+ + +L +L+ ++GK
Sbjct: 296 MASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGK 355
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
++ A ++++ G+V T +Y L C G + A ++KS RH KP IT+
Sbjct: 356 VSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS-RHIKPDHITYN 414
Query: 437 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
LI I + + M+D+ P + T N ++ Y R K + E
Sbjct: 415 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 474
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
LKP+ +Y S++ A
Sbjct: 475 G-------------LKPNVVSYGSIVNA 489
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 95/471 (20%), Positives = 181/471 (38%), Gaps = 59/471 (12%)
Query: 148 EKRWR----SEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDK 203
E RW A VL+D R + + M G++ T ++ LG K
Sbjct: 105 EARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRK 164
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRF-VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
G + S+L G R L +Y ++ L K +A + N M++ P
Sbjct: 165 GDLTKVESLL----GEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKS-RFNP 219
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLI-ERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
D+ ++++ + G ++E +KL+ E +R+ LEP+ + Y ++
Sbjct: 220 DVVTFNTMIAGFCREGDVREALKLLREAIRRG----------------LEPNQLSYTPLI 263
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
+ + + ++ G P T G L+ G++N+A+
Sbjct: 264 HGFCVRGEAMVASDLLVEMMGRGHTPDMITLG------------ALIHGLVVSGQVNDAL 311
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
M +R V+ A++Y L LC A ++E++ + +P + +T LI
Sbjct: 312 IVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLE-QKVQPDKFIYTTLIDG 370
Query: 442 SMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
+ + D IF+ M++ P+I N M+K Y + M +A +A
Sbjct: 371 FVRSDKLSDARKIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCI--- 427
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
PDE+TY+++++ A + M C+ + +A L+
Sbjct: 428 ----------PDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCN 477
Query: 562 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAY 612
G + E F + G P+ + +T +LI ++ + + +I A AY
Sbjct: 478 IGDTYSAEDLFAKMQSEGLFPNVVHYT-VLIGSLFKKD-----KVIQAAAY 522
>gi|307109972|gb|EFN58209.1| hypothetical protein CHLNCDRAFT_142073 [Chlorella variabilis]
Length = 903
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 158/394 (40%), Gaps = 58/394 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ + G R A+ V D + + D +YT L++ AG +A +++ M
Sbjct: 314 LLRVCAEAGDLRNALHVADMLQAAGLRMD---SILYTTLISACAAAGDAEKAFQLYGQMR 370
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPV------ 309
D + D Y SV +K + I+R+ Q ++ + + + V
Sbjct: 371 AD-GVPADKMVYSSV---------VKACAQQIDRLPQSERRQQLVLLERAFSLVEDMKGA 420
Query: 310 -LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLV 368
+ D V+NA++ A + Q + F V + + G +P+ TY L+
Sbjct: 421 KIPTDAAVWNALVTAAGRAAQLQRAFNVLEDMIHFGTRPNDRTYA------------SLI 468
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYEL--ACCLCNNGRWQDAMLVVEKIKSLR 426
A G A+ R ++ G T VY AC ++G +A++ +
Sbjct: 469 DACARAGDKGLALRVYRKAQREGCARTLMVYSAAVHACIQAHDGCDSEAVMGIYGDMQRS 528
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
H P F L+ ++ G++ + + M ++ P GT +A++ V+ RN +A
Sbjct: 529 HVAPDNQLFGMLMKAAGASGNLQLVLDLHDEMEREGLRPCTGTESALMAVHIRNGQVPEA 588
Query: 486 KELFEETTRA-------------NSSGYTFLSGD---------GAPLKPDEYTYSSMLEA 523
+ ++ A N+ F GD L+PD +T+S++ A
Sbjct: 589 QAVYRSLRAAGQWPHAYATNALLNAYANNFRLGDVVSLVCDMAQGGLRPDGFTFSAIFNA 648
Query: 524 SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLV 557
A + E V + M L G ++D+T HA +L+
Sbjct: 649 CQRADEAELALDVARLMKLRGVRMDET-HAVILL 681
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/418 (20%), Positives = 167/418 (39%), Gaps = 56/418 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ L K +A+ +L+ ++ + D+++ + ++ L K + H+A ++ + ML
Sbjct: 259 LIHALSQKNQVSEALKLLEEMFVMGCMPDVQT---FNDVIHGLCKVNKIHDATKLVDRML 315
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN--------------- 300
YPD Y + L ++G L E K++ ++ P+ I N
Sbjct: 316 LR-GFYPDNMTYGFLLHGLCRIGKLNEARKILIKI-PCPNNAILNTLINGYVMSGQLKEA 373
Query: 301 ---MHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
++ + +PD+ YN +++ + ++ + G +P+ TY
Sbjct: 374 QSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYA---- 429
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAML 417
+LV + G + EA + M RG+ + +Y L C LC + A+
Sbjct: 430 --------ILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALN 481
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVY 476
++ ++ + + KP T+ LI ID+ +F +M D N T N ++
Sbjct: 482 LLSEMCT-KGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHAL 540
Query: 477 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
R F KA L + G T D+ TY+ +++A E +
Sbjct: 541 LRRGAFQKALTLVNDML---FRGCTL----------DKITYNGLIKAFCKVGNIEKGLEL 587
Query: 537 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEML 591
Y+ M + G D ++ + GK +++AF+ L +A G +P + + +L
Sbjct: 588 YEQMIMDGLGADTISCNIMINGLCKVGK---VDNAFEFLRDAINRGFVPDIVTYNSVL 642
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 120/601 (19%), Positives = 232/601 (38%), Gaps = 103/601 (17%)
Query: 135 GSDYFAKNVEWHPEKRWRSEAEAI--------RVLVD-----RLSEREMTAKNW--KFVR 179
GSD NVE P W S E R+L+ +L E + F R
Sbjct: 42 GSDPIKMNVESEPATEWESLLEPFDLTKLRKSRILITPVQLCKLLELPLDVPTLLEIFER 101
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILG 239
+ Q G T + LG G ++ +L +K++ + ++ ++ G
Sbjct: 102 VGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLL---MQMKEEGIVFRESIFMIIMKHYG 158
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
KAG+P +A+R L D+ A + T L+ E++ + Q +
Sbjct: 159 KAGQPGQAIR----------LLLDMRAVYLCEPTFKSYDLVLEIL-VTGNCPQVATNVFY 207
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+M K + P + + V+ A ++ + + + K G P++ Y
Sbjct: 208 DMLSKG----VSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVY------- 256
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
+ L+ A ++ +++EA+ + M G + + ++ LC + DA +V
Sbjct: 257 -----QTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLV 311
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRN 479
+++ LR P +T+ L+ G +++ I +K C PN +N ++ Y +
Sbjct: 312 DRML-LRGFYPDNMTYGFLLHGLCRIGKLNEARKIL--IKIPC-PNNAILNTLINGYVMS 367
Query: 480 DMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKG 539
+A+ ET + G+ +PD +TY+ ++ + +
Sbjct: 368 GQLKEAQSFLNETMI--NFGF----------QPDIFTYNILMHGLCKEGSLSFARDLVNE 415
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN 599
M+ GC+ + +A L+ +AG LLE EAG + H + + I +++ +
Sbjct: 416 MSRRGCEPNVITYAILVNGLCKAG---LLE-------EAGLVLHEMSARGLTINSVIYN- 464
Query: 600 YEKAVALINAMA-----YAPFHITERQWT-----ELFESNE--------DRISRDKLEKL 641
LI A+ + ++ T +LF N DRI D+ +L
Sbjct: 465 -----CLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRI--DEAFRL 517
Query: 642 LNALCNCNAASSEITVSNLSRALHALCRS---EKERDLSSSAHFGSQAIDISPLHGIHEA 698
+ + A ++ +T + L +HAL R +K L + F +D +G+ +A
Sbjct: 518 FHNMLLDGAVANNVTYNTL---IHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKA 574
Query: 699 F 699
F
Sbjct: 575 F 575
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 136/339 (40%), Gaps = 54/339 (15%)
Query: 137 DYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMN---QSGLMFTEGQM 193
D F N+ H + S + A R LV+ +S R + ++N ++GL+ G +
Sbjct: 389 DIFTYNILMHGLCKEGSLSFA-RDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLV 447
Query: 194 LK----------------LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAI 237
L L+ L K A+++L + K DL F Y L+
Sbjct: 448 LHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDL---FTYNSLIYG 504
Query: 238 LGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKR 297
L K R EA R+F+ ML D + ++ Y+++ L + G ++ + L+ M +
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVT-YNTLIHALLRRGAFQKALTLVNDMLFRGCTL 563
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNA-CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
D + YN ++ A C + KG+ +++Q+ GL +
Sbjct: 564 ---------------DKITYNGLIKAFCKVGNIEKGL-ELYEQMIMDGLGADTIS----- 602
Query: 357 ESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
+++ + GK++ A +R+ RG V Y + LC GR ++A+
Sbjct: 603 -------CNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEAL 655
Query: 417 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
+ ++++ + +P T+ I G ++D S F
Sbjct: 656 NLFDRLQ-VEGVRPDAFTYNTFISWQCKEGMVNDACSFF 693
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 143/333 (42%), Gaps = 35/333 (10%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGL 219
VL++ L ++ A+ K V M G E L+ GL KG +A+S+LD +
Sbjct: 244 VLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDR---M 300
Query: 220 KDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGL 279
+ + + Y ++ L K GR + R+ LM E+ + + Y ++ L + G
Sbjct: 301 VSSKCVPNVVTYGTIINGLVKQGRALDGARVLALM-EERGYHVNEYVYSALISGLFKEGK 359
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+E ++L + M K E + +VY+AV++ + V +
Sbjct: 360 SQEAMQLFKEMTVKEC---------------ELNTIVYSAVIDGLCRDGKPDEALEVLSE 404
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ + KP+A TY L++ F+E G ++A+ ++M + Y
Sbjct: 405 MTNNRCKPNAYTY------------SSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCY 452
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM- 458
L LC +G+ ++AM+V ++ + KP + + +I + G ++D + ++ M
Sbjct: 453 SVLIHGLCKDGKVKEAMMVWAQMLG-KGCKPDVVAYGSMINGLSNAGLVEDALQLYNEML 511
Query: 459 --KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+ +P++ T N +L + S+A +L
Sbjct: 512 CQEPDSQPDVVTYNILLNALCKQSSISRAIDLL 544
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 99/499 (19%), Positives = 197/499 (39%), Gaps = 71/499 (14%)
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMSVLD-WVYGLKDKRDLKSRFVYTKLLAILGKAGRPH 245
+ E + + K G +A+ + D Y + KR +KS + +L ++ + G +
Sbjct: 92 VVVEKCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKS---FNSVLNVIIQEGLFY 148
Query: 246 EALRIFNLML--EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR 303
AL +N ++ + N+ P++ ++ V T+ +VGL+ + V++ R P +
Sbjct: 149 RALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQM---FRDMPVSKC----- 200
Query: 304 KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCL 363
+PD+ Y +++ + + + +++ G PS T+
Sbjct: 201 -------QPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTF----------- 242
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
VL+ ++G + V NM +G Y L LC G+ + A+ +++++
Sbjct: 243 -NVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMV 301
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMF 482
S + P +T+ +I + G D + M++ N +A++ +
Sbjct: 302 SSK-CVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKS 360
Query: 483 SKAKELFEETT----RANSSGYTF----LSGDGAP--------------LKPDEYTYSSM 520
+A +LF+E T N+ Y+ L DG P KP+ YTYSS+
Sbjct: 361 QEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSL 420
Query: 521 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGE 580
++ A ++K MA ++ ++ L+ + GK + +L G
Sbjct: 421 MKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGC 480
Query: 581 IPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEK 640
P + + M+ E A+ L N M + +S D ++ +
Sbjct: 481 KPDVVAYGSMINGLSNAGLVEDALQLYNEM-----------LCQEPDSQPDVVTYN---I 526
Query: 641 LLNALCNCNAASSEITVSN 659
LLNALC ++ S I + N
Sbjct: 527 LLNALCKQSSISRAIDLLN 545
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 28/231 (12%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+KG + G+ +A+ + W + ++ Y+ L+ L K G+ EA+ ++ ML
Sbjct: 420 LMKGFFEAGNGHKAIEM--W-KDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQML 476
Query: 256 -EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ C PD+ AY S+ L GL+++ ++L M + +P +PD+
Sbjct: 477 GKGCK--PDVVAYGSMINGLSNAGLVEDALQLYNEMLCQ-------------EPDSQPDV 521
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYR---------RCLLK 365
V YN +LNA + + G P T + + + R R L
Sbjct: 522 VTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLD 581
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
LV + ++ A V M Q+ + S + + LCN + Q A+
Sbjct: 582 GLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAI 632
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/434 (19%), Positives = 156/434 (35%), Gaps = 51/434 (11%)
Query: 160 VLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY-- 217
VL+ MT + +K R M + GL+ + + ++KGL W+ A+ +L V
Sbjct: 331 VLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDT 390
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
G+ D F Y L+ L K + HEA+ +++ M E + P I YHS+ + +
Sbjct: 391 GVPDV------FTYGCLIHWLCKHQKLHEAVNLWDKMKE-AGVKPSIVTYHSLLLGYCEK 443
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
G + E +KL M K P+ V Y ++ + + + +
Sbjct: 444 GRMDEALKLYSEMPDKG---------------FPPNEVTYTTLMKGYIKKKAFDNAYALL 488
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
++R++G+ TY +L+ + ++ E ++ G V T
Sbjct: 489 NEMRQNGVSCGDYTY------------NILINGLYMVNRVCEVDEMLKRFLSEGFVPTTM 536
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y + G A + +++ + P +T+T I D + + +
Sbjct: 537 TYNSIINGFVKAGMMGSAFGMYRQMRK-KGITPNIVTYTSFIDGYCRTNCCDLAVKLLIY 595
Query: 458 M-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
+ +D +P+I NA + + + S+A L DG L PD
Sbjct: 596 VRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFL-----------VLLLKDG--LTPDVTV 642
Query: 517 YSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLL 576
Y+S + Y M D + L+ S+ G + ++
Sbjct: 643 YNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMM 702
Query: 577 EAGEIPHPLFFTEM 590
IP FT +
Sbjct: 703 ANHVIPDDKTFTAL 716
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 16/140 (11%)
Query: 215 WVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTL 274
+ Y + +R + +YT L+ K G AL +++ M+ + ++ PD + ++ L
Sbjct: 662 FYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMAN-HVIPDDKTFTALTHGL 720
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G + +L++ MR+ + P++V YN ++NACV + + F
Sbjct: 721 CRSGDIDGAKRLLDDMRRLD---------------VSPNIVTYNMLINACVRDGKLQEAF 765
Query: 335 WVFKQLRKSGLKPSAATYGL 354
+ ++ SG+ P TY +
Sbjct: 766 QLHDEMLSSGVVPDDTTYDI 785
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 15/183 (8%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ P V Y ++ C + + +Q+ + GL PS + L +++
Sbjct: 322 VTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNL------------VIK 369
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+ + +A+ ++ + GV + Y L LC + + +A+ + +K+K K
Sbjct: 370 GLLRDKRWKDAIGLLKLVVDTGVPDVFT-YGCLIHWLCKHQKLHEAVNLWDKMKE-AGVK 427
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIGTVNAMLKVYSRNDMFSKAKEL 488
P +T+ L++ + G +D+ + ++ M D PN T ++K Y + F A L
Sbjct: 428 PSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYAL 487
Query: 489 FEE 491
E
Sbjct: 488 LNE 490
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 150/396 (37%), Gaps = 79/396 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL GL G +A VL L + L++ +Y L+ + G A IF M
Sbjct: 334 LLNGLCKDGKISKAEEVLQT---LVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMK 390
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ PD Y+++ LG+V + E L+ M + + P +
Sbjct: 391 SRL-IRPDHITYNALINGLGKVERITEAHDLVIEMEKNG---------------VNPSVE 434
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+N +++A + Q + F + +++ GLKP+ +YG +V AF + G
Sbjct: 435 TFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYG------------SIVNAFCKNG 482
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
KI EAVA + +M + V+ A VY + G A ++ EK+KS
Sbjct: 483 KILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKS----------- 531
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
+G+ P+I T N ++K + S+A+EL +
Sbjct: 532 SGV------------------------PPSIVTYNLLIKGLCKQSQISEAEELLDSLRNY 567
Query: 496 NSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWL 555
L PD +Y++++ A + + K M G + + L
Sbjct: 568 G-------------LAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRML 614
Query: 556 LVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
AG+ H +E+ + +L+ +P + M+
Sbjct: 615 FSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMV 650
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 89/466 (19%), Positives = 170/466 (36%), Gaps = 67/466 (14%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + K + AG EA+ + M D P+ +Y+ V L + G + VKL +
Sbjct: 153 FTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFD 212
Query: 289 RMRQK---PSKRIKNM----HRKNWD-------------PVLEPDLVVYNAVLNACVPSH 328
M +K P+ N H K D L+P+++ YN +L+ +
Sbjct: 213 EMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAG 272
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-----------------------LLK 365
+ V ++ + P TY + + + R
Sbjct: 273 RMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCS 332
Query: 366 VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSL 425
+L+ ++GKI++A ++ + G++ T +Y L C G + A + +++KS
Sbjct: 333 ILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKS- 391
Query: 426 RHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSK 484
R +P IT+ LI I + + M K+ P++ T N ++ Y R K
Sbjct: 392 RLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEK 451
Query: 485 A----KELFEETTRANSSGYTFLSG----DGAPLK--------------PDEYTYSSMLE 522
++ E+ + N Y + +G L+ P Y+++++
Sbjct: 452 CFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIID 511
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
A + + + M SG + L+ + + E DSL G P
Sbjct: 512 AYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAP 571
Query: 583 HPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFES 628
+ + ++ +SN ++A+ L M + R + LF S
Sbjct: 572 DVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSS 617
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 145/340 (42%), Gaps = 38/340 (11%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQM-LKLLKGLGDKGSWRQAMSVLD 214
E + +V LS+ W + M ++ E ++ + L++ ++A+ VLD
Sbjct: 132 EVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLD 191
Query: 215 WV--YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
+ YGL+ +V+ LL L K G EA ++F M E P++ + S+
Sbjct: 192 EMPKYGLE-----PDEYVFGCLLDALCKNGSVKEASKVFEDMRE--KFPPNLRYFTSLLY 244
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKG 332
+ G L E +++ +M++ LEPD+VV+ +L+ + +
Sbjct: 245 GWCREGKLMEAKEVLVQMKEAG---------------LEPDIVVFTNLLSGYAHAGKMAD 289
Query: 333 VFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
+ + +RK G +P+ Y + L++ L R E +++EA+ ME+ G
Sbjct: 290 AYDLMNDMRKRGFEPNVNCYTV--------LIQALCRT---EKRMDEAMRVFVEMERYGC 338
Query: 393 VGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCI 452
Y L C G V++ ++ + P ++T+ ++++ ++C+
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRK-KGVMPSQVTYMQIMVAHEKKEQFEECL 397
Query: 453 SIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+ + MK C P++ N ++++ + +A L+ E
Sbjct: 398 ELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE 437
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 151/369 (40%), Gaps = 42/369 (11%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
E E VL+ R + M K + + M + GL E LL L GS ++A V
Sbjct: 166 EPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVF 225
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+ +++K R+ +T LL + G+ EA + + +++ L PDI + ++
Sbjct: 226 E---DMREKFPPNLRY-FTSLLYGWCREGKLMEAKEVL-VQMKEAGLEPDIVVFTNLLSG 280
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMH----------RKNWDPVL-----------EP 312
G + + L+ MR++ + N + K D + E
Sbjct: 281 YAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEA 340
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
D+V Y A+++ + V +RK G+ PS TY ++++V A
Sbjct: 341 DIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTY-----------MQIMV-AHE 388
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
++ + E + + M++RG +Y + C G ++A+ + ++++ S ++
Sbjct: 389 KKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVD 448
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDH---CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
TF +I G + + + F+ M P GT+ ++L R+D AK+++
Sbjct: 449 -TFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVW 507
Query: 490 EETTRANSS 498
+ SS
Sbjct: 508 SCISNKTSS 516
>gi|356528730|ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Glycine max]
Length = 963
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/405 (20%), Positives = 161/405 (39%), Gaps = 54/405 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y L+ + GKAGR EA +F ML+ + D+ ++++ G G L E L+
Sbjct: 273 TYNVLIDLYGKAGRLSEAAEVFAEMLK-AGVAVDVWTFNTMIFVCGSQGDLAEAEALLGM 331
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M +K + PD +N L+ + +K++R++GL P
Sbjct: 332 MEEKG---------------VAPDTKTFNIFLSLYAEARDIGAAVLCYKRIREAGLCPDE 376
Query: 350 ATY----GL------------AMESYRRCLLKV-------LVRAFWEEGKINEAVAAVRN 386
TY G+ ++ R + V +V + EG +++A ++
Sbjct: 377 VTYRALLGVLCRKNMVREVEDLIDEMERAFVSVDEHCVPGIVEMYVGEGDVDKAFDLLKK 436
Query: 387 MEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
+ G + ++++ + G W++A V + ++L K + +I +
Sbjct: 437 FQVNGEM-SSNIRSAIMDVFAEKGLWEEAEDVFYRGRNLAGRKRDVLECNVMIKAYGKAK 495
Query: 447 HIDDCISIFQHMKDHCE-PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSG 505
D IS+F+ MK+H PN T N+++++ S D+ +A +L +E
Sbjct: 496 LYDKAISLFKGMKNHGTWPNESTYNSLVQMLSGADLVDQAMDLVDEMQEVG--------- 546
Query: 506 DGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKC 565
KP T+S+++ A Q V+K M +G + ++ + L+ + G
Sbjct: 547 ----FKPPCQTFSAVIGCYARLGQLSDAVSVFKEMVRTGVKPNEVVYGSLINGFAEHGSL 602
Query: 566 HLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
F + E+G + + T +L N E A A+ M
Sbjct: 603 EEALKYFHMMEESGLSSNLVVLTSLLKSYCKVGNLEGAKAIYERM 647
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 120/293 (40%), Gaps = 33/293 (11%)
Query: 200 LGDKGSWRQAMSVLDWVYGLKD-KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDC 258
+KG W +A V L KRD+ V K GKA +A+ +F M ++
Sbjct: 455 FAEKGLWEEAEDVFYRGRNLAGRKRDVLECNVMIK---AYGKAKLYDKAISLFKGM-KNH 510
Query: 259 NLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYN 318
+P+ + Y+S+ L L+ + + L++ M++ K P ++
Sbjct: 511 GTWPNESTYNSLVQMLSGADLVDQAMDLVDEMQEVGFK---------------PPCQTFS 555
Query: 319 AVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKIN 378
AV+ Q VFK++ ++G+KP+ YG L+ F E G +
Sbjct: 556 AVIGCYARLGQLSDAVSVFKEMVRTGVKPNEVVYG------------SLINGFAEHGSLE 603
Query: 379 EAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
EA+ ME+ G+ V L C G + A + E++K++ L + +
Sbjct: 604 EALKYFHMMEESGLSSNLVVLTSLLKSYCKVGNLEGAKAIYERMKNMEGGLDL-VACNSM 662
Query: 439 IISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
I D G + + F+++++ + + ++ +Y + +A E+ EE
Sbjct: 663 IGLFADLGLVSEAKLAFENLREMGRADAISYATIMYLYKGVGLIDEAIEIAEE 715
Score = 42.7 bits (99), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 123/336 (36%), Gaps = 44/336 (13%)
Query: 161 LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLK 220
L++ +E + K+ +M +SGL + LLK G+ A ++ + + ++
Sbjct: 592 LINGFAEHGSLEEALKYFHMMEESGLSSNLVVLTSLLKSYCKVGNLEGAKAIYERMKNME 651
Query: 221 DKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLL 280
DL + L A LG A M D +Y ++ VGL+
Sbjct: 652 GGLDLVACNSMIGLFADLGLVSEAKLAFENLREMGR-----ADAISYATIMYLYKGVGLI 706
Query: 281 KELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQL 340
E +++ E M+ R D V YN VL + Q+ + ++
Sbjct: 707 DEAIEIAEEMKLSGLLR---------------DCVSYNKVLVCYAANGQFYECGELIHEM 751
Query: 341 RKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV----GTA 396
L P+ T+ KVL + G EAVA + + Q G T
Sbjct: 752 ISQKLLPNDGTF------------KVLFTILKKGGIPTEAVAQLESSYQEGKPYARQTTF 799
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
+ Y L +N + A +E L S F I + G I+ ++I+
Sbjct: 800 TALYSLVG--MHNLALESAQTFIESEVDLDSS-----AFNVAIYAYGSAGDINKALNIYM 852
Query: 457 HMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
M+D H P++ T ++ Y + M K+++ +
Sbjct: 853 KMRDEHLGPDLVTYIYLVGCYGKAGMVEGVKQIYSQ 888
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 140/369 (37%), Gaps = 49/369 (13%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
VY L+ + G EAL+ F++M E+ L ++ S+ + +VG L+ + ER
Sbjct: 588 VYGSLINGFAEHGSLEEALKYFHMM-EESGLSSNLVVLTSLLKSYCKVGNLEGAKAIYER 646
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M KNM DLV N+++ F+ LR+ G + A
Sbjct: 647 M--------KNMEGG-------LDLVACNSMIGLFADLGLVSEAKLAFENLREMG-RADA 690
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
+Y M Y+ G I+EA+ M+ G++ Y ++ C N
Sbjct: 691 ISYATIMYLYKGV------------GLIDEAIEIAEEMKLSGLLRDCVSYNKVLVCYAAN 738
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTV 469
G++ + ++ ++ S + P + TF L GG + ++ + +P
Sbjct: 739 GQFYECGELIHEMIS-QKLLPNDGTFKVLFTILKKGGIPTEAVAQLESSYQEGKP----- 792
Query: 470 NAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQ 529
Y+R F+ L A S TF+ + + D ++ + A +A
Sbjct: 793 ------YARQTTFTALYSLVGMHNLALESAQTFIESE---VDLDSSAFNVAIYAYGSAGD 843
Query: 530 WEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTE 589
+Y M D + +L+ +AG ++ + S LE GEI E
Sbjct: 844 INKALNIYMKMRDEHLGPDLVTYIYLVGCYGKAGMVEGVKQIY-SQLEYGEIES----NE 898
Query: 590 MLIQAIVQS 598
L +AI+ +
Sbjct: 899 SLFKAIIDA 907
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 137/350 (39%), Gaps = 88/350 (25%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +A+ VL+ ++ R L + YT +L K G +AL +F+ +
Sbjct: 366 LVHAFCKAGRMDKALGVLE---NIEANRLLPTIETYTSILDGYVKGGNIQKALEVFD-RI 421
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRI-------------- 298
+ L P + +Y+S+ L + ++ ++ M PS+RI
Sbjct: 422 KTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDV 481
Query: 299 -------KNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
+ M ++N L D+V Y A+L AC S G VF+Q+ +GLK + T
Sbjct: 482 EKAFGVFQRMKKEN----LAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQIT 537
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y C + L A+ G++ EA V ME+ G +Y L +GR
Sbjct: 538 Y---------CTM--LDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGR 586
Query: 412 WQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNA 471
+D +E ++ SS +P+IGT N
Sbjct: 587 HED----------------MEALLAKMVKSS----------------SKQTKPDIGTYNT 614
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
+++VY++ +A+ELF+ R L PD T+++++
Sbjct: 615 LIQVYAQAGFIPRAEELFQGLARLK-------------LVPDATTWTALM 651
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 81/439 (18%), Positives = 170/439 (38%), Gaps = 42/439 (9%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M G+ E ++ G G+ A W K + + VY ++ +
Sbjct: 192 MLSQGIQLNEAVFCSIISGYASAGNNEAAEH---WFEKFKAENLVPGGIVYNSIVQAYCQ 248
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN 300
AG E + +E+ ++ Y +V ++ ++ + R++ P + N
Sbjct: 249 AGN-METVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSP--QAGN 305
Query: 301 MHRKNWDPVLE-------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYG 353
M K D + E P+ ++Y +++ + F V++ + +GLKP Y
Sbjct: 306 M-AKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIY- 363
Query: 354 LAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQ 413
+LV AF + G++++A+ + N+E ++ T Y + G Q
Sbjct: 364 -----------NILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQ 412
Query: 414 DAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAM 472
A+ V ++IK+ +P +++ L+ +++ + M + P+ A+
Sbjct: 413 KALEVFDRIKT-AGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTAL 471
Query: 473 LKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEY 532
+ Y+R KA +F+ + N L D Y ++L+A +
Sbjct: 472 TEGYARTGDVEKAFGVFQRMKKEN-------------LAIDIVAYGALLKACCNSGAMHG 518
Query: 533 FEYVYKGMALSGCQLDQTKHAWLLVEA-SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
V++ + +G + +Q + +L A +RAG+ E ++ G P L + ++
Sbjct: 519 AAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLI 578
Query: 592 IQAIVQSNYEKAVALINAM 610
V +E AL+ M
Sbjct: 579 NAYGVSGRHEDMEALLAKM 597
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/374 (19%), Positives = 152/374 (40%), Gaps = 48/374 (12%)
Query: 172 AKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVY 231
AK + M++ G+ + ++ G G + A V + + K D+ +Y
Sbjct: 307 AKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDI---VIY 363
Query: 232 TKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMR 291
L+ KAGR +AL + +E L P I Y S+ + G +++ +++ +R++
Sbjct: 364 NILVHAFCKAGRMDKALGVLE-NIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIK 422
Query: 292 QKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAAT 351
L P +V YN++L+ + Q + + ++ +G+ PS
Sbjct: 423 TAG---------------LRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERI 467
Query: 352 YGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGR 411
Y E Y R G + +A + M++ + Y L CN+G
Sbjct: 468 YTALTEGYART------------GDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGA 515
Query: 412 WQDAMLVVEKIK--SLRHSKPLEITFTGLIISSMD-GGHIDDCISIFQHM-KDHCEPNIG 467
A V ++I L+H+ +IT+ ++ + G +++ + M +D +P+
Sbjct: 516 MHGAAEVFQQITDAGLKHN---QITYCTMLDGAYARAGRVEEAEELVSAMERDGTKPDTL 572
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
N+++ Y + + L + +++S KPD TY+++++ A A
Sbjct: 573 IYNSLINAYGVSGRHEDMEALLAKMVKSSSK----------QTKPDIGTYNTLIQVYAQA 622
Query: 528 HQWEYFEYVYKGMA 541
E +++G+A
Sbjct: 623 GFIPRAEELFQGLA 636
>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 521
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 41/254 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G DKG A+ V D + G + + L+ K G+ HEA R+F+ M
Sbjct: 261 LISGYCDKGLLGLALKVRDLMMG--KNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEM- 317
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ N+ P++ Y+++ GQ G + + L E M + K D++
Sbjct: 318 KLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVK---------------ADIL 362
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL-------------AMESYRRC 362
YN ++ + K ++ K+L K L P+A+T+ A YR
Sbjct: 363 TYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSM 422
Query: 363 L----------LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
+ ++L AF + + AV +R+M +R + +S+ E+ LC GR
Sbjct: 423 VRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEVYSGLCRCGRK 482
Query: 413 QDAMLVVEKIKSLR 426
Q A+++ +I++ R
Sbjct: 483 QFALMLCSEIEAKR 496
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 135/349 (38%), Gaps = 47/349 (13%)
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGT 395
F ++++ G P+ + + S LV +F+ + + N V +
Sbjct: 172 TFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYTINM-----V 226
Query: 396 ASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
S Y C G A V+EK+K + P +TF LI D G + + +
Sbjct: 227 VSAY-------CKLGELNKASEVLEKMKDMGLC-PNVVTFNSLISGYCDKGLLGLALKVR 278
Query: 456 QHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPD 513
M K+ PN+ T N ++ + + +A +F E AN + P+
Sbjct: 279 DLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLAN-------------VAPN 325
Query: 514 EYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFD 573
TY++++ A E +++ M + + D + L++ + GK +
Sbjct: 326 VVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVK 385
Query: 574 SLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM---AYAPFHITERQWTELFESNE 630
L + +P+ F+ ++ V++N E+A + +M ++P T R F NE
Sbjct: 386 ELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNE 445
Query: 631 D-----RISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKER 674
D ++ RD LE+ + S I LS LCR +++
Sbjct: 446 DFDGAVQVLRDMLERFM-------TPDSSI----LSEVYSGLCRCGRKQ 483
>gi|356511125|ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 503
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 182/430 (42%), Gaps = 83/430 (19%)
Query: 153 SEA-EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMS 211
SEA E +R+L ++S + ++ +N+ L + L +W Q +
Sbjct: 40 SEAQELVRLLTSKISNDK-----EPLLKTLNKYVKQVRTQHCFLLFEELAKHDNWLQCLE 94
Query: 212 VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHS-V 270
V W+ K + + +Y+KL++++GK G+ A+ +F+ M + PD + Y++ +
Sbjct: 95 VFRWMQ--KQRWYIADNGIYSKLISVMGKKGQTRMAMWLFSEM-RNTGCRPDTSVYNALI 151
Query: 271 AVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQW 330
L K L K I + ++K M R +P++V YN +L A +
Sbjct: 152 TAHLHSRDKTKALAKAIGYFQ-----KMKGMER------CKPNIVTYNILLRAFAQARNV 200
Query: 331 KGVFWVFKQLRKSGLKPSAATYGLAMESY------------------RRC-----LLKVL 367
+ V +FK L +S + P T+ M++Y +C +L
Sbjct: 201 EQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARMKSNQCKPDLITFNLL 260
Query: 368 VRAF---WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNG--RWQD-AMLVVEK 421
+ ++ E GK+ + ++ ++R + T + N G R +D A V ++
Sbjct: 261 IDSYGKKQEFGKMEQVFKSLLRSKERASLPT------FNSMILNYGKARLKDKAEDVFKR 314
Query: 422 IKSLRHSKPLEITFTGLIISSMDGGHIDDCIS----IFQHM---KDHCEPNIGTVNAMLK 474
+ + ++ P +T LI M G DC+S +F + K H + + T+NAML
Sbjct: 315 MTDMGYT-PSFVTHESLIY--MYG--FCDCVSRAAQLFDELVESKAHIK--VSTLNAMLD 367
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
VY N + +A LFE RANS + PD T+ + +A A+Q E +
Sbjct: 368 VYCINGLPQEADSLFE---RANS----------IKIYPDSSTFKLLYKAYTKANQKELLD 414
Query: 535 YVYKGMALSG 544
+ K M G
Sbjct: 415 KLLKHMDKDG 424
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 116/290 (40%), Gaps = 29/290 (10%)
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG-- 445
+QR + +Y +L + G+ + AM + ++++ +P + LI + +
Sbjct: 101 KQRWYIADNGIYSKLISVMGKKGQTRMAMWLFSEMRNT-GCRPDTSVYNALITAHLHSRD 159
Query: 446 --GHIDDCISIFQHMK--DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
+ I FQ MK + C+PNI T N +L+ +++ + LF++
Sbjct: 160 KTKALAKAIGYFQKMKGMERCKPNIVTYNILLRAFAQARNVEQVNSLFKDL--------- 210
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
D + + PD YT++ +++A E V M + C+ D L+ +
Sbjct: 211 ----DESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARMKSNQCKPDLITFNLLIDSYGK 266
Query: 562 AGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI---QAIVQSNYEKAVALINAMAYAPFHIT 618
+ +E F SLL + E F M++ +A ++ E + M Y P +T
Sbjct: 267 KQEFGKMEQVFKSLLRSKERASLPTFNSMILNYGKARLKDKAEDVFKRMTDMGYTPSFVT 326
Query: 619 ERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALC 668
++ D +SR +L + L A I VS L+ L C
Sbjct: 327 HESLIYMY-GFCDCVSR--AAQLFDELVESKA---HIKVSTLNAMLDVYC 370
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/370 (19%), Positives = 144/370 (38%), Gaps = 55/370 (14%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P+ + ++ L G + E ++L++RM + K PDL+ N ++
Sbjct: 254 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK---------------PDLITINTLV 298
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYG-------------LAMESYRR------- 361
N S + + ++ + G +P+A TYG LAME R+
Sbjct: 299 NGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 358
Query: 362 ---CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD-AML 417
+++ + G ++ A ME +G+ Y L CN GRW D A L
Sbjct: 359 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL 418
Query: 418 VVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVY 476
+ + IK R P +TF+ LI S + G + + + + M P+ T +++ +
Sbjct: 419 LRDMIK--RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 476
Query: 477 SRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYV 536
+ + KA ++ + P+ T++ ++ A++ + +
Sbjct: 477 CKENHLDKANQMVDLMVSKGCD-------------PNIRTFNILINGYCKANRIDDGLEL 523
Query: 537 YKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIV 596
++ M+L G D + L+ GK ++ + F ++ P+ + + +L
Sbjct: 524 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 583
Query: 597 QSNYEKAVAL 606
EKA+ +
Sbjct: 584 NGESEKALEI 593
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 148/380 (38%), Gaps = 52/380 (13%)
Query: 148 EKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWR 207
E+ + +A +++D L + + M G+ L+ G + G W
Sbjct: 354 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 413
Query: 208 QAMSVL-DWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
+L D + KR + V ++ L+ K G+ EA + M+ + PD
Sbjct: 414 DGAKLLRDMI-----KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR-GIAPDTI 467
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
Y S+ + L + ++++ M K +P++ +N ++N
Sbjct: 468 TYTSLIDGFCKENHLDKANQMVDLMVSKGC---------------DPNIRTFNILINGYC 512
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
+++ +F+++ G+ TY L++ F E GK+N A +
Sbjct: 513 KANRIDDGLELFRKMSLRGVVADTVTY------------NTLIQGFCELGKLNVAKELFQ 560
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSM-D 444
M R V Y L LC+NG + A+ + EKI+ + L+I +II M +
Sbjct: 561 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE--KSKMELDIGIYNIIIHGMCN 618
Query: 445 GGHIDDCISIFQHMK-DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFL 503
+DD +F + +P + T N M+ + S+A+ LF + +
Sbjct: 619 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK-----------M 667
Query: 504 SGDGAPLKPDEYTYSSMLEA 523
DG PD +TY+ ++ A
Sbjct: 668 EEDGHA--PDGWTYNILIRA 685
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 61/323 (18%), Positives = 128/323 (39%), Gaps = 36/323 (11%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P ++ ++ + +A + Q+ V + KQ+ G+ + T + + + RC + L AF
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRC--RKLCLAF 241
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
GKI + G + L LC GR +A+ +V+++ + H KP
Sbjct: 242 SAMGKI----------IKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH-KPD 290
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF- 489
IT L+ G + + + M ++ C+PN T +L V ++ + A EL
Sbjct: 291 LITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLR 350
Query: 490 ---EETTRANSSGYTFL--------SGDGA----------PLKPDEYTYSSMLEASATAH 528
E + ++ Y+ + S D A + + TY+ ++ A
Sbjct: 351 KMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG 410
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+W+ + + M + + L+ + GK E ++ G P + +T
Sbjct: 411 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYT 470
Query: 589 EMLIQAIVQSNYEKAVALINAMA 611
++ +++ +KA +++ M
Sbjct: 471 SLIDGFCKENHLDKANQMVDLMV 493
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/461 (18%), Positives = 174/461 (37%), Gaps = 86/461 (18%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
+T L+ L + GR EA+ + + MLED L P+ Y ++ + ++G + L+ +M
Sbjct: 182 FTTLMNGLCREGRVVEAVALLDRMLED-GLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 240
Query: 291 RQ----KPSKRIKNMHRKN-----------WDPV------------LEPDLVVYNAVLNA 323
+ KP+ I + R+ W + PD+V YNA++NA
Sbjct: 241 EEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINA 300
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY------------------RRC--- 362
V ++ ++ ++ G+ PS TY ++ + + C
Sbjct: 301 FVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPD 360
Query: 363 --LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE 420
L+ + ++++ + + M + G+V Y L C G A +++
Sbjct: 361 IITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQ 420
Query: 421 KIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK------------DHCEPNIGT 468
++ S P +T L+ D G + D + +F+ M+ + EP++ T
Sbjct: 421 EMVS-SGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQT 479
Query: 469 VNAMLKVYSRNDMFSKAKELFEET----------------------TRANSSGYTFLSGD 506
N ++ F +A+EL+EE +R + + F S
Sbjct: 480 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMG 539
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
P+ T+++++ A + + ++ M G + + L+ + G +
Sbjct: 540 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNIN 599
Query: 567 LLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALI 607
F ++ +G P + ML + ++AVA++
Sbjct: 600 GALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAML 640
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 61/346 (17%), Positives = 131/346 (37%), Gaps = 39/346 (11%)
Query: 337 FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
F ++ K G P+ T+ L+ E +I+EA+ M + VV
Sbjct: 136 FGKITKLGFHPTVVTF------------STLLHGLCVEDRISEALDLFHQMCKPNVV--- 180
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
+ L LC GR +A+ +++++ +P +IT+ ++ G +++ +
Sbjct: 181 -TFTTLMNGLCREGRVVEAVALLDRMLE-DGLQPNQITYGTIVDGMCKMGDTVSALNLLR 238
Query: 457 HMKD--HCEPNIGT-----VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAP 509
M++ H +PN+ M+ + + +S+A++L +E
Sbjct: 239 KMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKK------------ 286
Query: 510 LKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLE 569
+ PD TY++++ A ++ E +Y M G ++ ++ + + E
Sbjct: 287 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAE 346
Query: 570 HAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESN 629
H F + G P + F ++ + + L++ M A +T L
Sbjct: 347 HMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGF 406
Query: 630 EDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 675
+ + LL + + + +T + L L LC + K +D
Sbjct: 407 CQVGDLNAAQDLLQEMVSSGVCPNVVTCNTL---LDGLCDNGKLKD 449
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 150/373 (40%), Gaps = 52/373 (13%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL GL G A VL L + + +R +Y L+ + G A F M
Sbjct: 161 LLNGLCKDGKVSIAEEVLQ---SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM- 216
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKN---MHRKNWDPVLEP 312
+ ++ PD Y++ L+ L K ++RI N + + D + P
Sbjct: 217 KSRHIKPDHITYNA---------LINGLCK---------AERITNAQDLLMEMQDNGVNP 258
Query: 313 DLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFW 372
+ +N +++A + Q + F V +++++GLKP+ +YG +V AF
Sbjct: 259 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG------------SIVNAFC 306
Query: 373 EEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
+ GKI EAVA + +M + V+ A VY + +G A ++VEK+KS P
Sbjct: 307 KNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS-NGISPSI 365
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEE 491
+T+ LI + I + I + +H P+ + N ++ KA +L +
Sbjct: 366 VTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ- 424
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
R + G +K TY ++ A + EY+Y+ M +
Sbjct: 425 --RMHKYG----------IKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAI 472
Query: 552 HAWLLVEASRAGK 564
H ++ S+ G
Sbjct: 473 HNIMVEAYSKYGN 485
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 125/319 (39%), Gaps = 54/319 (16%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++A + +AGR +A+ +F+ M E L P+ Y+++ + G L+ +L +
Sbjct: 16 FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVL-PNHITYNTMIDGHIKGGDLEAGFRLRD 74
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M L+P+ + YN +L+ + + + ++ + P
Sbjct: 75 QMVCHG---------------LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPD 119
Query: 349 AATY-----GLAMESYRRCLLK------------------VLVRAFWEEGKINEAVAAVR 385
TY GL+ + +L +L+ ++GK++ A ++
Sbjct: 120 GFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQ 179
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
++ G+V T +Y L C G + A ++KS RH KP IT+ LI
Sbjct: 180 SLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS-RHIKPDHITYNALINGLCKA 238
Query: 446 GHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
I + + M+D+ P + T N ++ Y R K + E
Sbjct: 239 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG-------- 290
Query: 505 GDGAPLKPDEYTYSSMLEA 523
LKP+ +Y S++ A
Sbjct: 291 -----LKPNVVSYGSIVNA 304
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 150/386 (38%), Gaps = 53/386 (13%)
Query: 197 LKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE 256
L+GL +G +A+ +++ + GL+ + L+ L +GR EA R+ L
Sbjct: 66 LRGLVRRGDLEEALRLVESMSGLEPS---AAPGPCAALIKKLCASGRTAEARRV----LA 118
Query: 257 DCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNM---------HRKNWD 307
C PD+ AY+++ G L +L+ M +P N N
Sbjct: 119 ACE--PDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNAL 176
Query: 308 PVLE--------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
VL+ PD+V Y +L A +K + ++R G P TY
Sbjct: 177 VVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITY------- 229
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
V+V +EG++++A+ ++++ G Y + LC RW+DA ++
Sbjct: 230 -----NVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLM 284
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSR 478
++ S + P +TF LI G ++ + + + + C PN + N +L + +
Sbjct: 285 AEM-SQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCK 343
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
+A E + G PD +Y+++L A + + +
Sbjct: 344 QKKMDRAMAFVE-----------LMVSRGC--YPDIVSYNTLLTALCRGGEVDAAVELLH 390
Query: 539 GMALSGCQLDQTKHAWLLVEASRAGK 564
+ GC + ++ ++AGK
Sbjct: 391 QLKDKGCTPVLISYNTVIDGLTKAGK 416
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 151/389 (38%), Gaps = 65/389 (16%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL +G A+ VLD + + + YT LL K +A+++ + M
Sbjct: 162 LIRGLCGRGRTGNALVVLD---DMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 218
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
PDI Y+ V + Q G + + IE ++ PS EP+ V
Sbjct: 219 AK-GCAPDIITYNVVVNGICQEGRVDDA---IEFLKSLPSHGC------------EPNTV 262
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY-RRCLLKV-------- 366
YN VL + +W+ + ++ + G P+ T+ + + RR L++
Sbjct: 263 SYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQI 322
Query: 367 --------------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
++ AF ++ K++ A+A V M RG Y L LC G
Sbjct: 323 PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEV 382
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 471
A+ ++ ++K + P+ I++ +I G + + + M +P+I T +
Sbjct: 383 DAAVELLHQLKD-KGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYST 441
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASA----TA 527
+ R D EE RA F ++P+ Y+++L T
Sbjct: 442 ISSGLCREDR-------IEEAIRA------FCKVQDMGIRPNTVLYNAILLGLCKRRETH 488
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ + F Y M +GC +++ + L+
Sbjct: 489 NAIDLFIY----MISNGCMPNESTYTILI 513
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 88/221 (39%), Gaps = 31/221 (14%)
Query: 173 KNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYT 232
+ FV +M G LL L G A+ +L + LKDK Y
Sbjct: 349 RAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELL---HQLKDKGCTPVLISYN 405
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
++ L KAG+ EAL + N M+ L PDI Y +++ L + ++E ++ +++
Sbjct: 406 TVIDGLTKAGKTKEALELLNEMVTK-GLQPDIITYSTISSGLCREDRIEEAIRAFCKVQ- 463
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
D + P+ V+YNA+L + +F + +G P+ +TY
Sbjct: 464 --------------DMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTY 509
Query: 353 GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
+L+ EG + EA + + RGVV
Sbjct: 510 ------------TILIEGLTYEGLVKEARELLGELCSRGVV 538
>gi|299471552|emb|CBN80038.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 416
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/431 (19%), Positives = 172/431 (39%), Gaps = 55/431 (12%)
Query: 204 GSWRQAMSVLDWVYGLKD-KRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYP 262
G R+A+ LD G+K R+L + + ++ G+ G+ +A+++ M L P
Sbjct: 8 GDRRKALRALD---GMKRLPRELLHQKSHCMVITACGRGGQWEQAVKLLREM-PTAGLSP 63
Query: 263 DIAAYHSVAVTL-------GQVGLLKEL--VKLIERMRQKPSKRIKNMHRKNWDPVL--- 310
++ Y++V G + LLKE+ V L + S + W L
Sbjct: 64 NVITYNAVFAACAKGEQWKGALALLKEMTAVGLTPDVITYSSAVDACAKGEQWKGALALL 123
Query: 311 --------EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
PD++ Y++ ++AC QWK + K++ GL P+ +Y C
Sbjct: 124 KEMTAVGLTPDVITYSSAVDACAKGEQWKEALALLKEMTAVGLTPNVISYNGLPSMSPWC 183
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
+ + G+ E +A ++ M G+ Y G+W++A+ +++++
Sbjct: 184 TYNSAIDGCSKGGQWKETLALLKEMAAVGLTPNVITYNSAIDACSKGGQWKEALALLKEM 243
Query: 423 KSLRHSKPLEITFTGLIISSMDGG--HIDDC---------ISIFQHMKD-HCEPNIGTVN 470
++ + P I+++ I + G + C +++ + M PN+ + +
Sbjct: 244 TAVGLT-PDVISYSSAIDACSKGATAQLFPCAKGEQWKGALALLKEMTVVGLTPNVVSYS 302
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
A + ++ D + A L ++ T L PD T +S ++A + QW
Sbjct: 303 AAIAC-AKGDQWKVALALLKKMTAVG-------------LTPDVITCNSAIDACSKGGQW 348
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
E + K MA G + + +R G+ + + E G +P + + +
Sbjct: 349 ETALALLKEMAAVGLTPSVVGYNSAIDACARGGRWKEGVDLLEEMRELGVVPDVITYHAL 408
Query: 591 LIQAIVQSNYE 601
++ + NY+
Sbjct: 409 MVTCV---NYD 416
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 131/357 (36%), Gaps = 67/357 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G A VLD +K + L Y ++ G+ AL IF +L
Sbjct: 144 LISGFIKANQLENANRVLDR---MKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELL 200
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+D N P + Y + G + +KL++ M K LEPD +
Sbjct: 201 KD-NCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKG---------------LEPDTL 244
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK---------- 365
YNA++ F + + L G KP TY + + R LL
Sbjct: 245 TYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILL----RTLLSRGKWSEGEKL 300
Query: 366 -----------------VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
+L+ +GK+ EAV +R+M+++G+ A Y L C
Sbjct: 301 ISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCR 360
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIG 467
GR A +E + S P + + ++ G D + +F+ + + C PN+
Sbjct: 361 EGRLDLATEFLEYMIS-DGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVS 419
Query: 468 TVNAMLK-VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEA 523
+ N + ++S D + + + + + + PDE TY+S++
Sbjct: 420 SYNTLFSALWSSGDRYRALEMILKLLNQG--------------IDPDEITYNSLISC 462
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/355 (19%), Positives = 143/355 (40%), Gaps = 33/355 (9%)
Query: 135 GSDYFAKNVEWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQML 194
G D K ++ K + ++ + + M K ++ +R ++ G
Sbjct: 223 GIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYN 282
Query: 195 KLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM 254
LL+ L +G W + ++ + + K ++ + ++ L+ L + G+ EA+ + M
Sbjct: 283 ILLRTLLSRGKWSEGEKLISEMISIGCKPNVVT---HSILIGTLCRDGKVEEAVNLLRSM 339
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
E L PD Y + + G L + +E M D L PD+
Sbjct: 340 KEK-GLKPDAYCYDPLIAGFCREGRLDLATEFLEYMIS--------------DGCL-PDI 383
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V YN ++ + + VF++L + G P+ ++Y L A W
Sbjct: 384 VNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSY------------NTLFSALWSS 431
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEIT 434
G A+ + + +G+ Y L CLC +G +A+ ++ ++S R+ +P ++
Sbjct: 432 GDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRY-RPNVVS 490
Query: 435 FTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
+ +++ +D I + M + C+PN T +++ + + ++A EL
Sbjct: 491 YNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 104/273 (38%), Gaps = 62/273 (22%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
+PD+ YNA+++ + ++Q + V +++ G P TY + + S+
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSF----------- 183
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
C+ G+ A+ + E++ + +P
Sbjct: 184 ------------------------------------CSRGKLDLALEIFEELLK-DNCEP 206
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELF 489
IT+T LI +++ G ID + + M EP+ T NA+++ + M KA EL
Sbjct: 207 TVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELL 266
Query: 490 EETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
LS G KPD TY+ +L + +W E + M GC+ +
Sbjct: 267 RS-----------LSSRGC--KPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
H+ L+ R GK + S+ E G P
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKP 346
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 104/245 (42%), Gaps = 16/245 (6%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
L++ F+ I +A + +E+ G + Y L + ++A V++++KS R
Sbjct: 110 LIKGFFNSRNIGKATRVMEILERYGKPDVFA-YNALISGFIKANQLENANRVLDRMKS-R 167
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKA 485
P +T+ +I S G +D + IF+ + KD+CEP + T +++ + A
Sbjct: 168 GFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVA 227
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+L +E S G L+PD TY++++ + + + ++ GC
Sbjct: 228 MKLLDEML---SKG----------LEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGC 274
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
+ D + LL GK E ++ G P+ + + ++ E+AV
Sbjct: 275 KPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVN 334
Query: 606 LINAM 610
L+ +M
Sbjct: 335 LLRSM 339
>gi|255660984|gb|ACU25661.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 376
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 136/337 (40%), Gaps = 47/337 (13%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
++G A R++ ++E + PD Y+++ +V +K+ +L E M + ++ +
Sbjct: 2 ESGDIDGAERVYKEIVES-KVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+ +N ++ + + V +++ ++KSG + TYG
Sbjct: 61 S----------------FNIMMRGLFDNDKVDEVISIWELMKKSGFVEDSITYG------ 98
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
+LV F + G I++++ + EQ+G V A Y + LC A+ V+
Sbjct: 99 ------ILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRAVSVL 152
Query: 420 EK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYS 477
IKS KP + LI + +D I +F+ M HC P I T N ++
Sbjct: 153 NGMIKS--GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLC 210
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+N+MF +A L +E L P TYS +++ H+ E ++
Sbjct: 211 KNEMFGEAYNLVKELLDKG-------------LNPGVITYSMLMKGLCLDHKVEKALQLW 257
Query: 538 KGMALSGCQLDQTKHAWLLVEASRAGKCHL-LEHAFD 573
+ G + D H L+ GK L L FD
Sbjct: 258 NQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFD 294
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 262 PDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVL 321
P + Y ++ L ++G ++L+++M +K K PD+V YN V+
Sbjct: 174 PSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCK---------------PDVVAYNTVI 218
Query: 322 NACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAV 381
++ + + F ++ G+ P+ TY ++ F G++NEA
Sbjct: 219 DSLCKDRRANEAMYFFSEMVDQGIPPNVVTY------------SSILHGFCNLGQLNEAT 266
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
+ + M R V+ + L LC G +A V E + +P T++ L
Sbjct: 267 SLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTE-NGVEPDAYTYSAL--- 322
Query: 442 SMDG----GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
MDG +D+ +F M P++ N ++ + ++ ++AK L E +
Sbjct: 323 -MDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRD 381
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
L PD TYS++++ A + + + ++K M G D ++ LL
Sbjct: 382 -------------LTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILL 428
Query: 557 VEASRAGKCHLLEHAFDSL--LEAGEI-PHPLFFTEMLIQAI 595
+ G L+ AF L ++ +I PH + +LIQ +
Sbjct: 429 DGLCKHGH---LDEAFRLLKAMQESKIEPHICIY-NILIQGM 466
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 151/368 (41%), Gaps = 36/368 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P +VV+N +L + V + V + KQ+ S ++P+ T L +L+
Sbjct: 67 PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYT------------LTILINCL 114
Query: 372 WEEGK--INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+ ++ A +A+ M + G+ T + L LC+ + DA+ + ++I + +
Sbjct: 115 CHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFA- 173
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P IT+T +I GH + + + + M++ C+P++ N ++ D K +
Sbjct: 174 PSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVI------DSLCKDR-- 225
Query: 489 FEETTRANSSGYTF--LSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQ 546
RAN + Y F + G P P+ TYSS+L Q ++K M
Sbjct: 226 -----RANEAMYFFSEMVDQGIP--PNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVM 278
Query: 547 LDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVAL 606
+ L+ + G F+ + E G P ++ ++ +QS ++A L
Sbjct: 279 PNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKL 338
Query: 607 INAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHA 666
+ M F + R + L + ++ + LL+ + + + +T S L +
Sbjct: 339 FDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTL---MQG 395
Query: 667 LCRSEKER 674
C++ + +
Sbjct: 396 FCQAGRPQ 403
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 96/236 (40%), Gaps = 27/236 (11%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
L+P V + +LN + +F ++ K G PS TY +++
Sbjct: 137 LQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITY------------TTIIK 184
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
+ G A+ ++ ME++G Y + LC + R +AM ++ +
Sbjct: 185 GLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVD-QGIP 243
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P +T++ ++ + G +++ S+F+ M + PN T ++ + M +A+ +
Sbjct: 244 PNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRV 303
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSG 544
FE T ++PD YTYS++++ Q + + ++ M G
Sbjct: 304 FEMMTENG-------------VEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKG 346
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 33/228 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L+ G +A ++L +Y RDL V Y+ L+ +AGRP A ++F M
Sbjct: 357 LINGHCKSRRLNEAKTLLSEMY----DRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEM 412
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
L PD Y + L + G L E +L++ M++ +EP +
Sbjct: 413 CSY-GLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESK---------------IEPHI 456
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+YN ++ + + +F L G++PS TY V++ +E
Sbjct: 457 CIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTY------------TVMISGLLKE 504
Query: 375 GKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
G NEA R M G + + Y NG +A+ ++E++
Sbjct: 505 GLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEM 552
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/472 (18%), Positives = 183/472 (38%), Gaps = 55/472 (11%)
Query: 149 KRWRSEAEAIRV---------LVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKG 199
+R+RS A RV ++D + + + +M + + G + G
Sbjct: 154 ERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGG 213
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
LG +G R A L +K+ + + + Y L+ L K+G EAL ++ +M+ D
Sbjct: 214 LGVEGGLRSAPVALPV---MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVD-G 269
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNA 319
+ P + Y + V G+ ++ ++ L+ M K P++ Y
Sbjct: 270 VVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVK---------------PNVYSYTI 314
Query: 320 VLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINE 379
+ + ++ + + ++ G KP T+ VL++ + G+I++
Sbjct: 315 CIRVLGQARRFDEAYRILAEMENEGCKPDVITH------------TVLIQVLCDAGRISD 362
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
A M++ Y L +NG Q M + +K+ ++ + + +T +I
Sbjct: 363 AKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNV-VAYTAVI 421
Query: 440 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
+ G + + + +F MK P + N+++ + + D F A ELF+
Sbjct: 422 DALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFK-------- 473
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVE 558
Y + G KP+ YT+ + + + Y+ M G D +L
Sbjct: 474 -YMDIHGP----KPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFG 528
Query: 559 ASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+++G+ + + F L G P + +T M+ S +++AV + M
Sbjct: 529 LAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDM 580
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/388 (20%), Positives = 155/388 (39%), Gaps = 54/388 (13%)
Query: 137 DYFAKNVE-------WHPEKR--WRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLM 187
D FA N E W+ K + A ++D L + + + M Q G++
Sbjct: 387 DKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIV 446
Query: 188 FTEGQMLKLLKGLGDKGSWRQAMSVLDW--VYGLKDKRDLKSRFVYTKLLAI--LGKAGR 243
+ L+ G + A+ + + ++G K YT +L I GK+G
Sbjct: 447 PEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNG-------YTHVLFINYYGKSGE 499
Query: 244 PHEALRIFNLMLEDCNLYPDIAAYHSVAVTL---GQVGLLKELVKLIERMRQKPSKRIKN 300
+A++ + LM + + PD+ A ++V L G++G+ K + ++ M P
Sbjct: 500 SIKAIQRYELM-KSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 558
Query: 301 MHRK------NWDPVLE-----------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
M K +D ++ PD++V N++++ + + + +F QL++
Sbjct: 559 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEM 618
Query: 344 GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
L+P+ TY L+ EGK+ E + + M Y +
Sbjct: 619 NLEPTDGTY------------NTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTIL 666
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCE 463
CLC NG DA+ ++ + + + P ++ +I + ++ SIF MK
Sbjct: 667 DCLCKNGAVNDALDMLYSMTT-KGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI 725
Query: 464 PNIGTVNAMLKVYSRNDMFSKAKELFEE 491
P+ T+ +L + + + +A + +E
Sbjct: 726 PDYATLCTILPSFVKIGLMKEALHIIKE 753
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 181/455 (39%), Gaps = 67/455 (14%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
+ L+D L + + W+ + + L T+G LL GLG +G ++ M +L+ +
Sbjct: 591 VVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM 650
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEAL-RIFNLMLEDCNLYPDIAAYHSVAVTLG 275
Y +L Y +L L K G ++AL ++++ + C PD+++Y++V
Sbjct: 651 YHSNYPPNL---ITYNTILDCLCKNGAVNDALDMLYSMTTKGC--IPDLSSYNTVI---- 701
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
GL+KE ER + S I +K VL PD +L + V K
Sbjct: 702 -YGLVKE-----ERYNEAFS--IFCQMKK----VLIPDYATLCTILPSFVKIGLMKEALH 749
Query: 336 VFKQ---------------------LRKSGLKPS------AATYGLAMESYRRCLLKVLV 368
+ K+ L+K+G + S A+ G+ ++ + C L+
Sbjct: 750 IIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLC---PLI 806
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
+ ++ K EA V+ + GV Y L C L + A + ++K L
Sbjct: 807 KHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKEL-GC 865
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
P E T+ L+ + I++ + + + M + E T N ++ ++ +A +
Sbjct: 866 GPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAID 925
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
L+ Y +S P TY +L+ A + E E ++ M GC+
Sbjct: 926 LY----------YNLMS---QGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKA 972
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIP 582
+ T + LL AG + H F +++ G P
Sbjct: 973 NCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINP 1007
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 79/427 (18%), Positives = 168/427 (39%), Gaps = 59/427 (13%)
Query: 144 EWHPEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDK 203
E+ + +++ + L++ + ++ T K+ +F I+ SG+ + + L+K L +
Sbjct: 753 EYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQ 812
Query: 204 GSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-DCNLYP 262
++A+ + V K Y L+ L A +F M E C P
Sbjct: 813 ---KKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCG--P 867
Query: 263 DIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLN 322
D Y+ + +G+ ++E++K+ E M HRK + E V YN +++
Sbjct: 868 DEFTYNLLLDAMGKSMRIEEMLKVQEEM-----------HRKGY----ESTYVTYNTIIS 912
Query: 323 ACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC-------------------- 362
V S + + ++ L G P+ TYG ++ +
Sbjct: 913 GLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKA 972
Query: 363 ---LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
+ +L+ G + ++M +G+ Y + LC G+ D +
Sbjct: 973 NCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYF 1032
Query: 420 EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSR 478
++ + +P IT+ LI +++ +S+F M K PN+ T N+++ +
Sbjct: 1033 RQLLEM-GLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGK 1091
Query: 479 NDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYK 538
++A +++EE + G+ KP+ +TY++++ + + + Y
Sbjct: 1092 AGKAAEAGKMYEELL---TKGW----------KPNVFTYNALIRGYSVSGSTDSAYAAYG 1138
Query: 539 GMALSGC 545
M + GC
Sbjct: 1139 RMIVGGC 1145
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 91/249 (36%), Gaps = 72/249 (28%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLE-----DCNLY 261
R+ +D Y L + + Y LL L KAGR +A +FN MLE +C +Y
Sbjct: 918 RRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIY 977
Query: 262 -----------------------------PDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
PDI +Y + TL + G L + + ++ +
Sbjct: 978 NILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLE 1037
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
LEPDL+ YN +++ S + + +F +++K G+ P+ TY
Sbjct: 1038 MG---------------LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTY 1082
Query: 353 ----------GLAMES---YRRCLLK----------VLVRAFWEEGKINEAVAAVRNMEQ 389
G A E+ Y L K L+R + G + A AA M
Sbjct: 1083 NSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIV 1142
Query: 390 RGVVGTASV 398
G + +S
Sbjct: 1143 GGCLPNSST 1151
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 119/317 (37%), Gaps = 36/317 (11%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGK 376
YN+++ V + +F ++++ G P TY L L+ A + +
Sbjct: 837 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNL------------LLDAMGKSMR 884
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
I E + M ++G T Y + L + R + A+ + + S S P T+
Sbjct: 885 IEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS-PTPCTYG 943
Query: 437 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETT-- 493
L+ + G I+D ++F M ++ C+ N N +L + K LF++
Sbjct: 944 PLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQ 1003
Query: 494 --RANSSGYTFLS---------GDGAP---------LKPDEYTYSSMLEASATAHQWEYF 533
+ YT + DG L+PD TY+ +++ + + E
Sbjct: 1004 GINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEA 1063
Query: 534 EYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQ 593
++ M G + + L++ +AGK ++ LL G P+ + ++
Sbjct: 1064 VSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1123
Query: 594 AIVQSNYEKAVALINAM 610
V + + A A M
Sbjct: 1124 YSVSGSTDSAYAAYGRM 1140
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 140/353 (39%), Gaps = 45/353 (12%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR---------- 361
PD+V Y ++ + +F QL K G P Y ++ + +
Sbjct: 518 PDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQI 577
Query: 362 -------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
C+ VL+ F+ EG + + +R + + G+ Y + C C+
Sbjct: 578 FKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCS 637
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC-EPNIG 467
+ A+ + E +K R ++P ITFT LI + G +DD + IF M + EPNI
Sbjct: 638 LKIFSKAIKLFEVLKCGR-TQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNIL 696
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
T + ++ Y + + A EL+E+ G + P+ +YS +++
Sbjct: 697 TYSCLIDGYFKTENTESAFELYEKML-------------GDRVSPNIVSYSILIDGLCKK 743
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
E ++ D + L+ + G+ +D +L G +P
Sbjct: 744 GLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD---- 799
Query: 588 TEMLIQAIVQSNYEKAVALINAMAY--APFHITERQWTELFESNEDRISRDKL 638
++L +A+ + ++ + A I + + +P ++ + + + +++ S D L
Sbjct: 800 -DLLQKALAEYGFQDSQASIYSTVFPESPLNLLVCPVSSMGDILQNKRSNDDL 851
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 137/352 (38%), Gaps = 56/352 (15%)
Query: 211 SVLDWVYGLKDKRDLKSRFV-------------YTKLLAILGKAGRPHEALRIFNLMLED 257
+++D + LK RD ++ YT L+ L + GR EAL +F +L+
Sbjct: 490 ALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKK 549
Query: 258 CNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVY 317
PD H + TL G K ++ P+ ++ + + PD+ +Y
Sbjct: 550 -GFSPD----HIIYCTLID-GFCK---------KRDPATGLQIFKLMQSNGIF-PDICIY 593
Query: 318 NAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKI 377
N ++N + V + +++ K GL+P TY + Y C LK+ +A K+
Sbjct: 594 NVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGY--CSLKIFSKAI----KL 647
Query: 378 NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG 437
E + R A + L C +GR DAML+ + R +P +T++
Sbjct: 648 FEVLKCGRTQPN------AITFTILIDAYCKDGRMDDAMLIFSSMLE-RGPEPNILTYSC 700
Query: 438 LIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
LI + + +++ M D PNI + + ++ + K L EE + A
Sbjct: 701 LIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCK-------KGLMEEASLA- 752
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLD 548
F G L PD Y ++ + +Y M ++G D
Sbjct: 753 -----FQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 95/523 (18%), Positives = 187/523 (35%), Gaps = 97/523 (18%)
Query: 167 EREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLK 226
+R K F R + + GL+ K+LKGL A D + +L
Sbjct: 217 KRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLV 276
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ ++ L+ + K R EA ++NLM+E + PD+ Y + L + G L+E L
Sbjct: 277 T---FSTLINVYCKELRLDEAFSLYNLMIEK-GIVPDLVIYSILINGLFRAGKLEEGNSL 332
Query: 287 IERMRQKPSK--------------RIKNM------HRKNWDPVLEPDLVVYNAVLNACVP 326
+ K R+ ++ + + + P++V Y+ ++N
Sbjct: 333 FSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCR 392
Query: 327 SHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR-----------------------CL 363
+ + VF Q+ K GL+PS TY ++ + + +
Sbjct: 393 NGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVV 452
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
+L+ +G ++EA+ +RG+ ++ L R +D L + +
Sbjct: 453 CSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDG-LKMYILM 511
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM------KDH----------CE---- 463
+ P +T+T L+ + G +D+ +++F + DH C+
Sbjct: 512 GMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDP 571
Query: 464 ----------------PNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
P+I N ++ ++ R EL E +
Sbjct: 572 ATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYG----------- 620
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
L+PD TY++M+ + + +++ + Q + L+ + G+
Sbjct: 621 --LEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDD 678
Query: 568 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
F S+LE G P+ L ++ ++ N E A L M
Sbjct: 679 AMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKM 721
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 167/396 (42%), Gaps = 58/396 (14%)
Query: 187 MFTEGQMLKLLKGLGDKGSWRQAMS---VLDWVYGLKDKRDLKSRFVYTKLLAILGKAGR 243
M T+ + K + + DK + R+ +S VL + + D ++ S V + ++ K+
Sbjct: 87 MLTKHRHFKTAQQVLDKMAQREILSSPSVLTSLVRIHDDPEVNSH-VLSWIVIHYAKSKM 145
Query: 244 PHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHR 303
H+A+++F M CNL P + A + +L + G+ + K+ +RM Q
Sbjct: 146 THDAVQVFEQM-SLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQ----------- 193
Query: 304 KNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCL 363
D V+ P++ VYN +++AC S + ++ ++ G+ P TY
Sbjct: 194 ---DGVV-PNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYN---------- 239
Query: 364 LKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
L+ + ++G EA++ ME+ G+ Y L C G+ ++AM + +IK
Sbjct: 240 --TLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIK 297
Query: 424 SLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMF 482
+ P +T+T LI ++ + + + M P + T N++L+ +
Sbjct: 298 D---AIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRI 354
Query: 483 SKAKELFEETT----RANSSGYTFL------SGD------------GAPLKPDEYTYSSM 520
A +L E + +A+S L GD A L P+ +TY ++
Sbjct: 355 RDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKAL 414
Query: 521 LEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ + E + + GM +G + ++W++
Sbjct: 415 IHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIV 450
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 102/251 (40%), Gaps = 49/251 (19%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G +G R+AM + + K + + YT L+ KA EALR+ +M+
Sbjct: 276 LIYGFCKEGKMREAMRMFGEI-----KDAIPNHVTYTTLIDGYCKANEFEEALRLREMMV 330
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK--------------RIKNM 301
LYP + Y+S+ L G +++ KL+ M ++ + +I ++
Sbjct: 331 AK-GLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDL 389
Query: 302 H------RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ K + L P+ Y A+++ + + + + + +G P+ TY
Sbjct: 390 NSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWI 449
Query: 356 MESYRR-------------------CL----LKVLVRAFWEEGKINEAVAAVRNMEQRGV 392
++SY + CL + L+R + +I A + +ME +G+
Sbjct: 450 VDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGI 509
Query: 393 VGTASVYYELA 403
G + +Y LA
Sbjct: 510 SGDSVIYTSLA 520
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 106/262 (40%), Gaps = 35/262 (13%)
Query: 156 EAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDW 215
A VL++ L + +T+ WK + M Q G++ L+ +A +L+
Sbjct: 166 HACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILN- 224
Query: 216 VYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLM-LEDCNLYPDIAAYHSVAVTL 274
++ K + F Y L+A+ K G +EAL + + M E NL DI +Y+S+
Sbjct: 225 --EMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINL--DIVSYNSLIYGF 280
Query: 275 GQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVF 334
+ G ++E +++ ++ D + P+ V Y +++ +++++
Sbjct: 281 CKEGKMREAMRMFGEIK---------------DAI--PNHVTYTTLIDGYCKANEFEEAL 323
Query: 335 WVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVG 394
+ + + GL P TY ++R +G+I +A + M +R V
Sbjct: 324 RLREMMVAKGLYPGVVTYN------------SILRKLCSDGRIRDANKLLHEMSERKVQA 371
Query: 395 TASVYYELACCLCNNGRWQDAM 416
+ L C G A+
Sbjct: 372 DSVTCNTLINAYCKIGDLNSAL 393
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 134/332 (40%), Gaps = 46/332 (13%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRR----- 361
D + P++ YNA+++ + ++ +FK++ GL+P+ TY + + + +
Sbjct: 331 DLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIE 390
Query: 362 ---CL--------LKV-------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
CL +KV L+ + ++G ++ A + M + G+ TA+ Y L
Sbjct: 391 DALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLI 450
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HC 462
LC NG M + ++ R TFT LI +D+ +F M D +
Sbjct: 451 AGLCRNGDLSSCMELHREMAE-RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNV 509
Query: 463 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
PN T N M++ Y KA +L+++ LKPD YTY S++
Sbjct: 510 IPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG-------------LKPDNYTYRSLIS 556
Query: 523 A----SATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA 578
S + E+ + A+ L+ LL R G+ H +D +
Sbjct: 557 GLCLTSGVSKANEFVADLENSYAV----LNNFSLTALLYGFFREGRFTETYHLWDEMAVR 612
Query: 579 GEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
G + FT ++ A+ Q + EK+ L M
Sbjct: 613 GVKLDLVSFTIIVYAALKQHDKEKSCVLFREM 644
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 99/501 (19%), Positives = 182/501 (36%), Gaps = 65/501 (12%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
A L+D+L + E + + M GL E L+ L +G A+ + D
Sbjct: 340 AYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD-- 397
Query: 217 YGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQ 276
++DK + + Y L+ K G A + + M+++ L P A+Y + L +
Sbjct: 398 -KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE-GLTPTAASYSPLIAGLCR 455
Query: 277 VGLLKELVKLIERM--------------------RQKPSKRIKNMHRKNWDPVLEPDLVV 316
G L ++L M + K + K D + P+ V
Sbjct: 456 NGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY-----GLAMES------------- 358
+N ++ + F ++ Q+ + GLKP TY GL + S
Sbjct: 516 FNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575
Query: 359 -----YRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGV-VGTASVYYELACCLCNNGRW 412
L L+ F+ EG+ E M RGV + S + L + +
Sbjct: 576 NSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKE 635
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DHCEPNIGTVNA 471
+ +L E + + KP +I +T +I + ++ ++ + M D PN T
Sbjct: 636 KSCVLFREMKE--QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTV 693
Query: 472 MLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWE 531
++ ++ A+ L +E N + P+++TY+ L+ AT E
Sbjct: 694 LINNLCKSGYLGSAELLCKEMLAGN-------------VLPNKFTYNCFLDYFATEGDME 740
Query: 532 YFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+ ++ M L G L+ +AGK + E+G P + ++ ++
Sbjct: 741 KAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 799
Query: 592 IQAIVQSNYEKAVALINAMAY 612
+ + KA L N M Y
Sbjct: 800 HELCKMGDINKAFELWNEMLY 820
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 74/389 (19%), Positives = 140/389 (35%), Gaps = 30/389 (7%)
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
S +T+ Q + L L+ ++RQ R ++ K + D VY A + A S
Sbjct: 156 SSGITVNQYTASQILFSLV-KIRQFALAR--DLFDKMLQSGVHLDEYVYTAGIRAYCESR 212
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
G + ++ G+K SA Y VL+ + ++ EAV M
Sbjct: 213 NLDGARGLVVRMESEGVKASAVPY------------NVLMYGLCKNMRVQEAVEVKNVMV 260
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
GV Y L C + A+ + + L P E + +I +
Sbjct: 261 NIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFV-PSEANCSFMIDELRKKELV 319
Query: 449 DDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
++ S+ + D PN+ NA++ +N+ F A LF+E ++G G
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKE-----------MAGRG 368
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
L+P+E TY+ ++ A E ++ M G ++ + L+ + G
Sbjct: 369 --LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDR 426
Query: 568 LEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFE 627
+++ G P ++ ++ + + L MA +T L
Sbjct: 427 ARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALIN 486
Query: 628 SNEDRISRDKLEKLLNALCNCNAASSEIT 656
D+ +L + + + N +E+T
Sbjct: 487 GFCKDKKMDEAARLFDKMIDSNVIPNEVT 515
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 120/261 (45%), Gaps = 33/261 (12%)
Query: 239 GKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM--RQKPSK 296
+A + EA+ FN+M E + ++AA++S+ L + +++ ++ ++M R P
Sbjct: 151 ARAQKLDEAVYTFNVM-EKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNRFSPDA 209
Query: 297 RIKNMHRKNWD--PVL---------------EPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
+ ++ + W P L +PD+V Y +++A + + + V +
Sbjct: 210 KTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQD 269
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ G +P+ Y +LV + + +I +AVAA +ME+ G++ VY
Sbjct: 270 MSSRGCQPTTFIYS------------ILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVY 317
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK 459
L C ++++A V++ ++ S P T+ ++ + + G D+ +F+ M
Sbjct: 318 NALITAFCKVKKFENAFRVMDDMQGHGIS-PNSRTWNIILNTLISLGKDDEAYRVFRSMI 376
Query: 460 DHCEPNIGTVNAMLKVYSRND 480
C+P+ T M+K++ ND
Sbjct: 377 KRCKPDSDTYTMMIKMFCEND 397
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 122/328 (37%), Gaps = 92/328 (28%)
Query: 180 IMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRF-----VYTKL 234
+M + G+ LL L + R+A + D + +RF Y+ L
Sbjct: 165 VMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFD---------KMNNRFSPDAKTYSIL 215
Query: 235 LAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK- 293
L G+A + +++ ML PDI Y + L + G ++E V +++ M +
Sbjct: 216 LEGWGRAPSLPKMREVYSDMLA-AGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRG 274
Query: 294 --PSKRIKNM--HRKNWDPVLE---------------PDLVVYNAVLNACVPSHQWKGVF 334
P+ I ++ H D +E PD+VVYNA++ A +++ F
Sbjct: 275 CQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAF 334
Query: 335 WVFKQLRKSGLKPSAATYGLAM----------ESYR-------RC--------------- 362
V ++ G+ P++ T+ + + E+YR RC
Sbjct: 335 RVMDDMQGHGISPNSRTWNIILNTLISLGKDDEAYRVFRSMIKRCKPDSDTYTMMIKMFC 394
Query: 363 -------------------------LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
VL+ ++G++++A + +M ++G+ S
Sbjct: 395 ENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGS 454
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSL 425
+ +L L GR +VEK+K L
Sbjct: 455 TFGKLRQLLLKEGRKDVLDFLVEKMKIL 482
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 84/221 (38%), Gaps = 20/221 (9%)
Query: 388 EQRGVVG-TASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGG 446
++RGV T Y+ + L ++Q L+ + + +R + G+I+
Sbjct: 97 QKRGVCAHTVRSYHTVVTSLAKIRQYQ---LMWDVVAIMRKEGVANVETFGIIMRKYARA 153
Query: 447 H-IDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
+D+ + F M+ + N+ N++L ++ KA+E+F++ S
Sbjct: 154 QKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNRFS------- 206
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
PD TYS +LE A VY M +GCQ D + ++ + G+
Sbjct: 207 -------PDAKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGR 259
Query: 565 CHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
+ G P ++ ++ V E AVA
Sbjct: 260 VEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVA 300
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 175/445 (39%), Gaps = 70/445 (15%)
Query: 280 LKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
L E ++ E+M ++ S R P+ V Y+ +++ + + + F + ++
Sbjct: 179 LGEAFRVFEKMSKEESCR--------------PNSVTYSILIHGLCEAGRLEEAFQLKQE 224
Query: 340 LRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVY 399
+ + G +PS TY VL++A + G ++A+ + M + V Y
Sbjct: 225 MVEKGCQPSTRTY------------TVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTY 272
Query: 400 YELACCLCNNGRWQDAMLVVEKIKSLRHS-KPLEITFTGLIISSMDGGHIDDCISIFQHM 458
L LC G+ ++A V K+ L+H P ITF LI G + +S FQ +
Sbjct: 273 TILIDRLCREGKIEEANGVFRKM--LKHGLCPGIITFNALINGYCKEGWV---VSAFQLL 327
Query: 459 ----KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL----------------------FEET 492
K +C+PNI T N +++ R KA L F +
Sbjct: 328 SVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKE 387
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
+ N + F S + A L+PD +T++++++ + E + M G LD+
Sbjct: 388 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTF 447
Query: 553 AWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM-- 610
L+ + GK + F++++E + F L +A A++ M
Sbjct: 448 TALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMK 507
Query: 611 -AYAPFHITERQWTE-LFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALC 668
P +T E + E +S LE++ A C+ N + I ++ L
Sbjct: 508 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRV-- 565
Query: 669 RSEKERDLSSSAHFGSQAIDISPLH 693
E E L S + FG +SP H
Sbjct: 566 -EEAETILFSMSSFG-----VSPNH 584
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 100/525 (19%), Positives = 191/525 (36%), Gaps = 106/525 (20%)
Query: 87 RIERLKFRQLASESKEFAGDNLKRENLRELKEMFEKDLNWVLDDDVQLGSDYFAKNVEWH 146
++ RL F N +R++L E +FEK
Sbjct: 153 KVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEK----------------------MS 190
Query: 147 PEKRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSW 206
E+ R + +L+ L E + ++ + M + G + L+K D G
Sbjct: 191 KEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 250
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
+AM +LD + K + + YT L+ L + G+ EA +F ML+ L P I
Sbjct: 251 DKAMKMLDE---MATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKH-GLCPGIIT 306
Query: 267 YHSVAVTLGQVGLLK---ELVKLIERMRQKPSKRIKN-----------------MHRKNW 306
++++ + G + +L+ ++E+ KP+ R N + R+
Sbjct: 307 FNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVV 366
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKV 366
D L PD V YN +++ Q F +F + +GL+P T+
Sbjct: 367 DNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTF------------TA 414
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI---- 422
L+ + G++ +A + +M ++G+ + L C G+ +D + E +
Sbjct: 415 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 474
Query: 423 -----------------------------KSLRHS-KPLEITFTGLIISSMDGGHIDDCI 452
K +++ P +T T LI G +
Sbjct: 475 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 534
Query: 453 SIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLK 511
+ + MK C PN+ T ++ N +A ET + S + +
Sbjct: 535 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA-----ETILFSMSSF--------GVS 581
Query: 512 PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
P+ +TY+ +++A A + + + M +GCQ + ++ LL
Sbjct: 582 PNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 626
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 166/411 (40%), Gaps = 75/411 (18%)
Query: 181 MNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGK 240
M ++GL+ L+ G GS ++A +++ +K L Y L+ +
Sbjct: 266 MKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL---MKQTNILPDLCTYNILINGVCN 322
Query: 241 AGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ---KPSKR 297
AG E L + ++M + L PD+ Y+++ ++GL E KL+E+M KP++
Sbjct: 323 AGSIREGLELMDVM-KSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQV 381
Query: 298 IKNMH--------------RKNWDPV----LEPDLVVYNAVLNACVPSHQWKGVFWVFKQ 339
N+ RK + V PD+V Y+ ++ A + G + ++
Sbjct: 382 THNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 340 LRKSGLKPSAATYGLAMES-----------------YRRCLL------KVLVRAFWEEGK 376
+ + G+K + T +++ ++R + L+ ++ E K
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEK 501
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK--PLEIT 434
+ +A M++ + T + + L LC++G+ + AM EK L S P + T
Sbjct: 502 VEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAM---EKFDELAESGLLPDDCT 558
Query: 435 FTGLIISSMDGGHIDDCISIF-QHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE--- 490
F +I+ G ++ + + +K +P+ T N +L + M KA F
Sbjct: 559 FNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI 618
Query: 491 -----ETTRANS------------SGYTFLSG-DGAPLKPDEYTYSSMLEA 523
+T N+ Y LS + L+PD +TY+S++ +
Sbjct: 619 TEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITS 669
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 130/311 (41%), Gaps = 57/311 (18%)
Query: 241 AGRPHEALRIFNLMLE--------DCNL-------YPD---IAAYHSVAVTLGQVGL--- 279
AG+PH AL++F M+ CN YP IA+ V + ++G+
Sbjct: 144 AGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLD 203
Query: 280 LKELVKLIER--MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
+K L+ + K + + R + + PD V YN +L A + V +
Sbjct: 204 VKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLL 263
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
++++GL P+ TY LV + + G + EA V M+Q ++
Sbjct: 264 LDMKRNGLVPNRVTYN------------NLVYGYCKLGSLKEAFQIVELMKQTNILPDLC 311
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y L +CN G ++ + +++ +KSL+ +P +T+ LI + G + + +
Sbjct: 312 TYNILINGVCNAGSIREGLELMDVMKSLK-LQPDVVTYNTLIDGCFELGLSLEAKKLMEQ 370
Query: 458 MK-DHCEPNIGTVNAMLKVYS----RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
M+ D +PN T N LK R ++ K KEL E G++ P
Sbjct: 371 MENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVE------MHGFS----------P 414
Query: 513 DEYTYSSMLEA 523
D TY ++++A
Sbjct: 415 DIVTYHTLIKA 425
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 140/380 (36%), Gaps = 42/380 (11%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y +L + K GR + + L ++ L P+ Y+++ ++G LKE +++E
Sbjct: 242 TYNTILKAMSKKGRLSDVKDLL-LDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL 300
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+Q + PDL YN ++N + + + ++ L+P
Sbjct: 301 MKQTN---------------ILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDV 345
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
TY L+ +E G EA + ME GV + LC
Sbjct: 346 VTYN------------TLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKE 393
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
+ ++ V+++ + P +T+ LI + + G + + + + M + + N T
Sbjct: 394 EKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTIT 453
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
+N +L + +A L + A+ GY DE TY +++
Sbjct: 454 LNTILDALCKERKVDEAHNLLDS---AHKRGYIV----------DEVTYGTLIMGYFREE 500
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFT 588
+ E ++ M T L+ GK L FD L E+G +P F
Sbjct: 501 KVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFN 560
Query: 589 EMLIQAIVQSNYEKAVALIN 608
+++ + EKA N
Sbjct: 561 SIILGYCKEGRVEKAFEFYN 580
>gi|255661008|gb|ACU25673.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 369
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 114/286 (39%), Gaps = 41/286 (14%)
Query: 307 DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY------- 359
D + PD VVYNA+LN + + K F +++ + + G S A++ + M
Sbjct: 18 DSKVSPDAVVYNAMLNGFYRAGRIKDCFELWEMMGREG-NRSVASFNIMMRGLFDNGRVD 76
Query: 360 ----------------RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
+LV F + G IN+++ + E++G V A Y +
Sbjct: 77 EVNSIWELMKKGGYVEDSITYGILVHGFCKNGYINKSLRVLETAERKGGVLDAFAYSAMI 136
Query: 404 CCLCNNGRWQDAMLVVEK-IKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK-DH 461
LC + + A+ V+ IKS KP + LI + +D I +F+ M H
Sbjct: 137 NGLCKETKLEKAISVLNGMIKS--GCKPNTHVYNALINGLIGASKSEDAIRVFREMGITH 194
Query: 462 CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML 521
C P I T N ++ +++ F +A +L +E L P TYS ++
Sbjct: 195 CSPTIVTYNILINGLCKSERFGEAYDLVKEMLEKG-------------LTPSVITYSLLM 241
Query: 522 EASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHL 567
+ H+ E ++ + +G + D H L+ GK L
Sbjct: 242 KGLCLGHKIEMALQLWNQVTKNGFKPDVQMHNTLIHGLCSVGKTQL 287
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 169/423 (39%), Gaps = 72/423 (17%)
Query: 230 VYTKLLAILGKAGRPHEALRIFN-LMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+Y L+ L + R +EA+++ + L C PD+ ++ V L + G + E KL +
Sbjct: 237 IYQMLIHALSENNRVNEAMKLLEEMFLMGCE--PDVQTFNDVIHGLCKAGRIHEAAKLHD 294
Query: 289 RMRQK---PSKRIKN--MH-----------RKNWDPVLEPDLVVYNAVLNACVPSHQWK- 331
RM + I+ MH R + P+ V+YN ++N V S +++
Sbjct: 295 RMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEE 354
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
++K + +G +P A T+ +++ ++G + A+ + M ++G
Sbjct: 355 AKDLLYKNMVIAGFEPDAFTF------------NIMIDGLCKKGYLVSALEFLDEMVKKG 402
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTG---LIISSMDGGHI 448
Y L C G +++A VV + + K L + G LI + G I
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSA----KGLSLNTVGYNCLIGALCKDGKI 458
Query: 449 DDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
D + ++ M C+P+I T N+++ +ND +A L+ + L G
Sbjct: 459 QDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRD---------MLLEGVI 509
Query: 508 APLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG---K 564
A + TY++++ A + + + M GC LD + L+ + G K
Sbjct: 510 A----NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEK 565
Query: 565 C-HLLEHAF---------------DSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALIN 608
C L+E F +S G++ L F +IQ + + +LIN
Sbjct: 566 CLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLIN 625
Query: 609 AMA 611
+
Sbjct: 626 GLC 628
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 154/369 (41%), Gaps = 43/369 (11%)
Query: 120 FEKD---LNWVLDDDVQLGSDYFAKNVEWHPE---KRWRSEAEAIRVLVDRLSEREMTAK 173
FE D N ++D + G Y +E+ E K + +L+D ++ +
Sbjct: 368 FEPDAFTFNIMIDGLCKKG--YLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEE 425
Query: 174 NWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSR-FVYT 232
K V M+ GL L+ L G + A+ + YG + K + +
Sbjct: 426 ASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQM----YGEMSSKGCKPDIYTFN 481
Query: 233 KLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQ 292
L+ L K + EAL ++ ML + + + Y+++ ++ L+++ KL+ MR
Sbjct: 482 SLIYGLCKNDKMEEALGLYRDMLLE-GVIANTVTYNTLIHAFLRLELIQQADKLVGEMRF 540
Query: 293 KPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATY 352
+ P+ D + YN ++ A + + + +Q+ + PS +
Sbjct: 541 RGC------------PL---DNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINS- 584
Query: 353 GLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
+L+ +F GK+N+A+ +R+M QRG+ Y L LC GR+
Sbjct: 585 -----------CNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRF 633
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDD-CISIFQHMKDHCEPNIGTVNA 471
Q+A+ + +++ + P +T+ LI G +D C +F+ + + PN T +
Sbjct: 634 QEALNLFNGLQA-KGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSI 692
Query: 472 MLKVYSRND 480
++ + +N+
Sbjct: 693 LINYFVKNN 701
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/432 (19%), Positives = 175/432 (40%), Gaps = 60/432 (13%)
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQ-----KPSKRIKNM--HRKNWDP---------- 308
Y+ + LG VG K + KL+++M+ K S I M + K P
Sbjct: 96 VYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDM 155
Query: 309 ----VLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLL 364
EP YN VL V + K VF + G+ P+ T+G+ M
Sbjct: 156 WGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVM-------- 207
Query: 365 KVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS 424
+AF +++ A + +R+M + G V + +Y L L N R +AM ++E++
Sbjct: 208 ----KAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM-F 262
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMF 482
L +P TF +I G I + + M +D T +A+++ Y + +
Sbjct: 263 LMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF------TADALIQGYLMHGLC 316
Query: 483 SKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYF-EYVYKGMA 541
K + RA S P+ Y++++ + ++E + +YK M
Sbjct: 317 RMGK---VDEARAMLSKIP---------NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMV 364
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 601
++G + D ++ + G D +++ G P+ + +T ++ Q ++E
Sbjct: 365 IAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFE 424
Query: 602 KAVALINAMAYAPFHITERQWTELFESNEDRISRD-KLEKLLNALCNCNAASSEITVSNL 660
+A ++N+M+ + + L + + +D K++ L ++ + +
Sbjct: 425 EASKVVNSMSAKGLSLNTVGYNCLIGA----LCKDGKIQDALQMYGEMSSKGCKPDIYTF 480
Query: 661 SRALHALCRSEK 672
+ ++ LC+++K
Sbjct: 481 NSLIYGLCKNDK 492
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/376 (18%), Positives = 139/376 (36%), Gaps = 52/376 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F + ++ L K G AL + M++ P++ Y + + G +E K++
Sbjct: 373 FTFNIMIDGLCKKGYLVSALEFLDEMVKK-GFEPNVITYTILIDGFCKQGHFEEASKVVN 431
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
M K L + V YN ++ A + + ++ ++ G KP
Sbjct: 432 SMSAKG---------------LSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPD 476
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
T+ L+ + K+ EA+ R+M GV+ Y L
Sbjct: 477 IYTF------------NSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLR 524
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
Q A +V +++ R IT+ GLI + G + C+ + + M + P+I
Sbjct: 525 LELIQQADKLVGEMR-FRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSIN 583
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
+ N ++ + R + A + + + L PD TY+S++
Sbjct: 584 SCNILINSFCRTGKVNDALQFLRDMIQRG-------------LTPDIVTYNSLINGLCKM 630
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG----KCHLLEHAFDSLLEAGEIPH 583
+++ ++ G+ G D + L+ G C LL + G IP+
Sbjct: 631 GRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSN----GFIPN 686
Query: 584 PLFFTEMLIQAIVQSN 599
+ ++ +LI V++N
Sbjct: 687 EITWS-ILINYFVKNN 701
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 176/424 (41%), Gaps = 62/424 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL G R A+ VL + GL + ++ +Y ++ L K A + + M+
Sbjct: 175 LINGLCKTGETRAALQVLRKIDGLLVQPNV---VMYNTIIDSLCKDKLVIHASDLCSEMI 231
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++PD+ Y ++ VG LKE V L +M K K PD+
Sbjct: 232 VK-RIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIK---------------PDVY 275
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
+N +++ + K V + K G+ + TY M+ Y LV+ +E
Sbjct: 276 TFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGY------FLVK---QE- 325
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
N+A M +RGV Y + LC +A+ + +++ S + P +T+
Sbjct: 326 --NKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHS-KSMAPNTVTY 382
Query: 436 TGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
LI + G I D + M + +P ++ T +++L +N KA L T+
Sbjct: 383 NSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLI---TK 439
Query: 495 ANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAW 554
G ++P+ YTY+ +++ + + + VY+ + + G LD +
Sbjct: 440 IKDQG----------IQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNV 489
Query: 555 LLVEASRAGKCHLLEHAFDSLL-------EAGEIPHPLFFTEMLIQAIVQSN-YEKAVAL 606
++ G C E FD L + G IP + + E L++A+ +++ +KAV L
Sbjct: 490 MV-----NGLCK--EGLFDEALSLVSKMEDNGCIPDAVTY-ETLVRALFENDKNDKAVKL 541
Query: 607 INAM 610
+ M
Sbjct: 542 LREM 545
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 163/398 (40%), Gaps = 60/398 (15%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
RQ + D + +K KR L + ++ +A + EA+ FN+M E ++ P++AA
Sbjct: 70 RQYQIMWDLINAMKRKRMLNVE-TFCIIMRKYARAQKLEEAVYTFNVM-EKYDVPPNLAA 127
Query: 267 YHSVAVTLGQ------------------VGLLKELVKLIERMRQKPS-KRIKNMHRKNWD 307
++ + L + V K L+E + P+ + + + R+ D
Sbjct: 128 FNGLFSALCKSKNVRKAQEIFDSSKDRFVPDSKTYTILLEGWGKTPNLPKAREIFREMVD 187
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
PD+V Y +++ + + + K++ + KP++ Y VL
Sbjct: 188 VGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYS------------VL 235
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI--KSL 425
+ + E +I +AV ME+ GV + Y L C ++++ V+ ++ K +
Sbjct: 236 IHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGM 295
Query: 426 R-HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSK 484
+ +S+ L I LI G D+ +F+ M CEP+ T M+K++ +
Sbjct: 296 QPNSRTLNIILNNLIAR----GETDEAFRVFRRMIKVCEPDADTYTMMIKMFCERNELEM 351
Query: 485 AKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSML----EASATAHQWEYFE-YVYKG 539
A ++++ + + P +T+S ++ E +H E + KG
Sbjct: 352 ALKVWKYMKKKH-------------FVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKG 398
Query: 540 MALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLE 577
+ SG + +H LL++ R L+ + L++
Sbjct: 399 IRPSGVTFGRLRH--LLIKEGREDVLEFLQQKINVLIK 434
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 128/304 (42%), Gaps = 46/304 (15%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
RQ + D + ++ K+ L + ++ +A + EA+ FN+M E +L P++ A
Sbjct: 112 RQYKLMWDLINAMRKKKMLNVE-TFCIVMRKYARAQKVDEAIYAFNVM-EKYDLPPNLVA 169
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQK--PSKRIKNMHRKNW-----------------D 307
++ + L + +++ ++ E MR + P + ++ + W D
Sbjct: 170 FNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMID 229
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
PD+V Y+ +++ + + + + + S KP+ Y VL
Sbjct: 230 AGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYS------------VL 277
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS--- 424
V + E ++ EAV ME+ G+ +V+ L C R ++ V++++KS
Sbjct: 278 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 337
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSK 484
+SK I LI + G D+ +F+ M CEP+ T ++K MF +
Sbjct: 338 TPNSKSCNIILRHLI----ERGEKDEAFDVFRKMIKVCEPDADTYTMVIK------MFCE 387
Query: 485 AKEL 488
KE+
Sbjct: 388 KKEM 391
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 75/185 (40%), Gaps = 32/185 (17%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ F+Y+ L+ G R EA+ F L +E + D+A ++S+ + +K + ++
Sbjct: 270 TTFIYSVLVHTYGTENRLEEAVDTF-LEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 328
Query: 287 IERMRQK---PSKRIKNM------HRKNWD----------PVLEPDLVVYNAVLNACVPS 327
++ M+ K P+ + N+ R D V EPD Y V+
Sbjct: 329 LKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEK 388
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ + V+K +RK G+ PS T+ VL+ EE +A + M
Sbjct: 389 KEMETADKVWKYMRKKGVFPSMHTFS------------VLINGLCEERTTQKACVLLEEM 436
Query: 388 EQRGV 392
+ G+
Sbjct: 437 IEMGI 441
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 142/373 (38%), Gaps = 60/373 (16%)
Query: 237 ILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSK 296
+L KA R EA+ +F LE P AY+++ + G G E L+ER + K S
Sbjct: 64 VLCKANRLDEAVELFE-QLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSI 122
Query: 297 RIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAM 356
P ++ YN +L + + +F+++++ + P+ TY + +
Sbjct: 123 ---------------PSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILI 166
Query: 357 ESYRR-----------------------CLLKVLVRAFWEEGKINEAVAAVRNMEQRGVV 393
+ R + +++ + K+ EA + M+ +
Sbjct: 167 DMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCT 226
Query: 394 GTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCIS 453
A + L L GR DA + EK+ H P I +T LI S G +D
Sbjct: 227 PNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHV-PGAIVYTSLIRSFFKCGRKEDGHK 285
Query: 454 IFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKP 512
I++ M C P++ +N + + K + LF E N+ G+ P
Sbjct: 286 IYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI---NAHGFI----------P 332
Query: 513 DEYTYSSMLEASATAHQW-EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
D +YS ++ A E +E Y M GC LD + ++ ++GK + A
Sbjct: 333 DARSYSILIHGLVKAGLANETYELFY-AMKEQGCVLDTHAYNAVIDGFCKSGK---VNKA 388
Query: 572 FDSLLEAGEIPHP 584
+ L E HP
Sbjct: 389 YQLLEEMKVKGHP 401
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 119/270 (44%), Gaps = 20/270 (7%)
Query: 324 CVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLK--VLVRAFWEEGKINEAV 381
CV S + + F + + +RK +P+ + Y + + LL VL +A +++EAV
Sbjct: 20 CVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKA----NRLDEAV 75
Query: 382 AAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIIS 441
+EQ V A Y + + G++ +A ++E+ K+ + S P I + ++
Sbjct: 76 ELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKA-KGSIPSVIAYNCILTC 134
Query: 442 SMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
+++ + IF+ MK PN+ T N ++ + R + A E+ ++ RA
Sbjct: 135 LGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAG----- 189
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
L P+ T + M++ A + E +++GM C + + L+ +
Sbjct: 190 --------LFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGK 241
Query: 562 AGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
G+ ++ +L+ G +P + +T ++
Sbjct: 242 CGRVDDAYSLYEKMLDCGHVPGAIVYTSLI 271
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 145/343 (42%), Gaps = 48/343 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLED-CNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
Y+ L+ L KAG +E +F M E C L D AY++V + G + + +L+E
Sbjct: 337 YSILIHGLVKAGLANETYELFYAMKEQGCVL--DTHAYNAVIDGFCKSGKVNKAYQLLEE 394
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
M+ K P +V Y +V++ + + +F++ + +G+K +
Sbjct: 395 MKVKGHP---------------PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNV 439
Query: 350 ATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNN 409
Y L+ F + G+I+EA + + Q+G+ + L L
Sbjct: 440 VVY------------SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA 487
Query: 410 GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGT 468
+A++ + +K L+ P +IT++ LI + +Q M K +PN T
Sbjct: 488 EEINEALICFQSMKDLK-CPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTIT 546
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
M+ ++ +A LF +R ++G PD +Y++M+E ++A+
Sbjct: 547 YTTMISGLAKAGNILEASGLF---SRFKANGGI----------PDSASYNAMIEGLSSAN 593
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA 571
+ +++ L GC + TK +L++A +C LE A
Sbjct: 594 KAMDAYALFEETRLKGCNI-HTKTCVVLLDALHKAEC--LEQA 633
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/443 (19%), Positives = 169/443 (38%), Gaps = 76/443 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
++ G G G + +A +L+ K K + S Y +L LGK R EALRIF M
Sbjct: 96 MIMGYGSAGKFDEAYGLLERQ---KAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMK 152
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKL---IERMRQKPSKRIKNMHRKNW------ 306
D P++ Y+ + L + G L +++ +ER P+ N+
Sbjct: 153 RDA--VPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKL 210
Query: 307 -----------DPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
D V P+ V ++++++ + + +++++ G P A Y
Sbjct: 211 EEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVY--- 267
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
L+R+F++ G+ + + M G ++ C+ G +
Sbjct: 268 ---------TSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKG 318
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLK 474
+ +I + P +++ LI + G ++ +F MK+ C + NA++
Sbjct: 319 RALFREINA-HGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVID 377
Query: 475 VYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFE 534
+ ++ +KA +L EE + G P P TY S+++ A
Sbjct: 378 GFCKSGKVNKAYQLLEE-----------MKVKGHP--PTVVTYGSVIDGLA--------- 415
Query: 535 YVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA----GEIPHPLFFTEM 590
++D+ A++L E +++ L + SL++ G I E
Sbjct: 416 -----------KIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 464
Query: 591 LIQAIVQSNYEKAVALINAMAYA 613
L+Q + N L++A+ A
Sbjct: 465 LMQKGLTPNVYTWNCLLDALVKA 487
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 51/294 (17%), Positives = 113/294 (38%), Gaps = 44/294 (14%)
Query: 154 EAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVL 213
+A + +L+ L + + + ++ M + G + ++ G G +A +L
Sbjct: 333 DARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLL 392
Query: 214 DWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVT 273
+ +K K + Y ++ L K R EA +F + + ++ Y S+
Sbjct: 393 EE---MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN-GIKLNVVVYSSLIDG 448
Query: 274 LGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE---------------------- 311
G+VG + E ++E + QK N++ W+ +L+
Sbjct: 449 FGKVGRIDEAYLIMEELMQK--GLTPNVY--TWNCLLDALVKAEEINEALICFQSMKDLK 504
Query: 312 --PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
P+ + Y+ ++N ++ F +++++K GLKP+ TY ++
Sbjct: 505 CPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITY------------TTMIS 552
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIK 423
+ G I EA + G + ++ Y + L + + DA + E+ +
Sbjct: 553 GLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETR 606
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 135/314 (42%), Gaps = 37/314 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL G +A+ +L + G + D+ + Y L+ K+ ++A +F +
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVT---YNTLIQGFCKSNELNKASEMFKDVK 268
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE---RMRQKPSKRIKNMHRKNWDPVLE- 311
PD+ Y S+ + G ++E L++ R+ P+ N+ + E
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 312 ----------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
PD+V + ++++ Q F +++++ G+ P+A TY
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY--- 385
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+L+ A E ++ +A + + + ++ +Y + C G+ +A
Sbjct: 386 ---------SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 474
++VE+++ + KP +ITFT LII G + + +SIF M C P+ TV+++L
Sbjct: 437 NVIVEEMEK-KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Query: 475 VYSRNDMFSKAKEL 488
+ M +A L
Sbjct: 496 CLLKAGMAKEAYHL 509
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 109/270 (40%), Gaps = 30/270 (11%)
Query: 334 FWVF----KQLRKSGLKPSAATYGLAMES----YRRCLLKVLVRAFWEEGKINEAVAAVR 385
FW + + L K+GL A M+S LL LV +F E+GK++ A A +
Sbjct: 103 FWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL- 161
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE---KIKSLRHSKPLEITFTGLIISS 442
++ V G V L L R +DAM + + + +S +K I GL
Sbjct: 162 -LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC--- 217
Query: 443 MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
G + + + M CEP+I T N +++ + +++ +KA E+F++
Sbjct: 218 -GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK-------- 268
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
G+ PD TY+SM+ A + + M G L+ ++
Sbjct: 269 ----SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 562 AGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
AG+ E ++ G P + FT ++
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
>gi|162460162|ref|NP_001106062.1| pentatricopeptide repeat 5 [Zea mays]
gi|154520281|gb|ABS82814.1| pentatricopeptide repeat protein 5 [Zea mays]
gi|413924537|gb|AFW64469.1| pentatricopeptide repeat 5 [Zea mays]
Length = 499
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 174/414 (42%), Gaps = 74/414 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L + LG + +W Q + V W+ K + + +Y+KL++++G+ G+ A+ +F+ M
Sbjct: 94 LFEELGRRDAWLQCLDVFRWMQ--KQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQM- 150
Query: 256 EDCNLYPDIAAYHS-VAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDL 314
+ PD + Y+S + L K L K + +++K + R +P +
Sbjct: 151 RNSGCKPDTSVYNSLIGAHLHSRDKTKALAKALGYF-----EKMKCIER------CQPTI 199
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
V YN +L A + K V +FK L +S + P TY +++Y +
Sbjct: 200 VTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGK------------N 247
Query: 375 GKINE---AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK-- 429
G I E + +++ + R V T ++ + + GR Q + + KSL SK
Sbjct: 248 GMIKEMESVLVRMKSTQCRPDVITFNILID------SYGRKQTFDKMEQVFKSLLRSKER 301
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P TF +I + + S+ + M++ +PN T ++ +Y+ D SKA+++
Sbjct: 302 PTHPTFNSMITNYGRARLREKAESVVEKMEELGFKPNYVTQECLIIMYAHCDCVSKARQV 361
Query: 489 FEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGM-------- 540
F+E + + K + +SMLEA Y G+
Sbjct: 362 FDELVTSQT-------------KVHLSSLNSMLEA-----------YCMNGLHTEADRLL 397
Query: 541 --ALSGCQLDQTKHAWLLVEA-SRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
AL C + LL +A ++A L++ + + G +P+ FF + L
Sbjct: 398 DTALQQCVVPNGSTYKLLYKAYTKANDKLLVQKLLKRMNKQGIVPNKKFFLDAL 451
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 124/295 (42%), Gaps = 39/295 (13%)
Query: 388 EQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGH 447
+QR V +Y +L + G+ + AM + ++++ KP + LI G H
Sbjct: 116 KQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRN-SGCKPDTSVYNSLI-----GAH 169
Query: 448 IDD---------CISIFQHMK--DHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRAN 496
+ + F+ MK + C+P I T N +L+ +++ + LF++
Sbjct: 170 LHSRDKTKALAKALGYFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDL---- 225
Query: 497 SSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
D + + PD YTY+ +L+A + E V M + C+ D L+
Sbjct: 226 ---------DESVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRMKSTQCRPDVITFNILI 276
Query: 557 VEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI---QAIVQSNYEKAVALINAMAYA 613
R +E F SLL + E P F M+ +A ++ E V + + +
Sbjct: 277 DSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKAESVVEKMEELGFK 336
Query: 614 PFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVSNLSRALHALC 668
P ++T+ ++ ++ D +S K ++ + L + +++ +S+L+ L A C
Sbjct: 337 PNYVTQECLIIMY-AHCDCVS--KARQVFDELVT---SQTKVHLSSLNSMLEAYC 385
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 157/396 (39%), Gaps = 42/396 (10%)
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
L+ R+ P +H D + P+ +N ++ + S + VF ++ + G+
Sbjct: 88 LMNRLPSVPEAYAFYLHL--LDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGV 145
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
+P+ T+ L+ + +N A A M + G+ Y
Sbjct: 146 QPTVVTF------------NTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQG 193
Query: 406 LCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEP 464
LC GR QDAM + E++ R P + T LI + G + + + M +
Sbjct: 194 LCKTGRIQDAMEMFEEMCE-RGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKA 252
Query: 465 NIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEAS 524
++ NA++ + R A ++ EE + DG LKPD+ TY+++++
Sbjct: 253 DLVAYNALVNGFCRVRDMKAANDIVEEMRK-----------DG--LKPDKVTYTTLIDGC 299
Query: 525 ATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHP 584
+ + + + M+ G LD + L+ S+AG+ E ++EAG P
Sbjct: 300 CKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDN 359
Query: 585 LFFTEMLIQAI-----VQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLE 639
+T M+I A V++ ++ + N P +T F S + D
Sbjct: 360 TTYT-MVIDAFCKNGDVKTGFKHLKEMQNK-GKNPGIVTYNVVMNGFCSLGQMKNAD--- 414
Query: 640 KLLNALCNCNAASSEITVSNLSRALHALCRSEKERD 675
LLNA+ N ++IT + L L C+ K RD
Sbjct: 415 MLLNAMLNIGVCPNDITYNIL---LDGHCKHGKVRD 447
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 129/307 (42%), Gaps = 48/307 (15%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLM 254
L++ + G A +V D + +R ++ V + L++ + KA + A + LM
Sbjct: 120 LMRDMIRSGKLASARNVFDEML----RRGVQPTVVTFNTLMSGMCKASDLNNANALRGLM 175
Query: 255 LEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK---PSKRI----KNMHRKNWD 307
+ + PD+ Y + L + G +++ +++ E M ++ P+ + + H K D
Sbjct: 176 AK-AGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGD 234
Query: 308 PV-------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGL 354
++ DLV YNA++N K + +++RK GLKP TY
Sbjct: 235 VTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTY-- 292
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
L+ +EG+++ A+ + M GV Y L L GR D
Sbjct: 293 ----------TTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVD 342
Query: 415 A-MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHC----EPNIGTV 469
A ++ E +++ +P T+T +I + G D + F+H+K+ P I T
Sbjct: 343 AERILCEMMEA--GLQPDNTTYTMVIDAFCKNG---DVKTGFKHLKEMQNKGKNPGIVTY 397
Query: 470 NAMLKVY 476
N ++ +
Sbjct: 398 NVVMNGF 404
>gi|212275248|ref|NP_001130560.1| uncharacterized protein LOC100191659 [Zea mays]
gi|194689480|gb|ACF78824.1| unknown [Zea mays]
Length = 558
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 155/360 (43%), Gaps = 52/360 (14%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGK 376
YN +L+A + +F+ + + P A ++ A++ CL + +G
Sbjct: 148 YNDILSALARAGDHATAVALFRAMP---VAPDAHSFATAVQ----CLCR--------QGA 192
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
+EA A+ M RG + + + + CLC GR AM V++ + L +P T+
Sbjct: 193 PDEAKLALDEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMLGL-GCEPTIRTYN 251
Query: 437 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
L+ G +++ + + + +KD P+I T +L + + +A +F +
Sbjct: 252 SLVGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGM 311
Query: 496 NSSGYTF-----LSG---DGAPLK-----------------PDEYTY----SSMLEASAT 526
S TF L+G +G PLK PD+ ++ +++L A T
Sbjct: 312 GLSPTTFTYNALLNGHCKEGNPLKAFALLMEMCGNNDAACLPDKTSFGIVLTALLRAGET 371
Query: 527 AHQWEYFEYVYK-GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+ W+ ++ + + G + G LD A+ A E F ++ +G P+
Sbjct: 372 SAAWQTYKRMERAGFEVDGRALDTLARGLCRRCATDASALGDAEEVFGKVVASGH--EPV 429
Query: 586 FFTEMLI-QAIVQSN-YEKAVALINAMAYAPFHITERQWTELFESNEDRI-SRDKLEKLL 642
+T L+ QA+ + + AVAL+ M + + +R +T++ + DR +RD L+ L+
Sbjct: 430 SYTYCLMAQALARGGEVDAAVALLEDMVRKGYALRKRAYTDVVRALCDRGRARDALQVLV 489
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 121/310 (39%), Gaps = 61/310 (19%)
Query: 200 LGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
L +G +AM VLD + GL + +++ Y L+ L GR EAL + L+D
Sbjct: 222 LCKRGRVTKAMEVLDAMLGLGCEPTIRT---YNSLVGGLCYVGRLEEALELLK-KLKDSP 277
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIE---RMRQKPS----KRIKNMHRKNWDPV--- 309
L PDI + V +VG +E + M P+ + N H K +P+
Sbjct: 278 LTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTTFTYNALLNGHCKEGNPLKAF 337
Query: 310 -------------LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLK---------- 346
PD + VL A + + + + +K++ ++G +
Sbjct: 338 ALLMEMCGNNDAACLPDKTSFGIVLTALLRAGETSAAWQTYKRMERAGFEVDGRALDTLA 397
Query: 347 --------PSAATYGLAME-------------SYRRCLLKVLVRAFWEEGKINEAVAAVR 385
A+ G A E SY CL+ +A G+++ AVA +
Sbjct: 398 RGLCRRCATDASALGDAEEVFGKVVASGHEPVSYTYCLM---AQALARGGEVDAAVALLE 454
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
+M ++G Y ++ LC+ GR +DA+ V+ + +R P F L+
Sbjct: 455 DMVRKGYALRKRAYTDVVRALCDRGRARDALQVLVLVMIVRDFVPGRNAFEALLGELSRQ 514
Query: 446 GHIDDCISIF 455
G D ++++
Sbjct: 515 GRWADAMTVY 524
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 100/260 (38%), Gaps = 48/260 (18%)
Query: 230 VYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIER 289
++ ++ L K GR +A+ + + ML P I Y+S+ L VG L+E ++L+++
Sbjct: 214 TFSAVVGCLCKRGRVTKAMEVLDAML-GLGCEPTIRTYNSLVGGLCYVGRLEEALELLKK 272
Query: 290 MRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSA 349
++ P L PD+ + VL+ + + +F GL P+
Sbjct: 273 LKDSP---------------LTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGMGLSPTT 317
Query: 350 ATYGLAMESYRR---------------------CL-----LKVLVRAFWEEGKINEAVAA 383
TY + + + CL +++ A G+ + A
Sbjct: 318 FTYNALLNGHCKEGNPLKAFALLMEMCGNNDAACLPDKTSFGIVLTALLRAGETSAAWQT 377
Query: 384 VRNMEQRGVVGTASVYYELACCLC-----NNGRWQDAMLVVEKIKSLRHSKPLEITFTGL 438
+ ME+ G LA LC + DA V K+ + H +P+ T+ +
Sbjct: 378 YKRMERAGFEVDGRALDTLARGLCRRCATDASALGDAEEVFGKVVASGH-EPVSYTYCLM 436
Query: 439 IISSMDGGHIDDCISIFQHM 458
+ GG +D +++ + M
Sbjct: 437 AQALARGGEVDAAVALLEDM 456
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 128/304 (42%), Gaps = 46/304 (15%)
Query: 207 RQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAA 266
RQ + D + ++ K+ L + ++ +A + EA+ FN+M E +L P++ A
Sbjct: 148 RQYKLMWDLINAMRKKKMLNVE-TFCIVMRKYARAQKVDEAIYAFNVM-EKYDLPPNLVA 205
Query: 267 YHSVAVTLGQVGLLKELVKLIERMRQK--PSKRIKNMHRKNW-----------------D 307
++ + L + +++ ++ E MR + P + ++ + W D
Sbjct: 206 FNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMID 265
Query: 308 PVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
PD+V Y+ +++ + + + + + S KP+ Y VL
Sbjct: 266 AGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYS------------VL 313
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKS--- 424
V + E ++ EAV ME+ G+ +V+ L C R ++ V++++KS
Sbjct: 314 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 373
Query: 425 LRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGTVNAMLKVYSRNDMFSK 484
+SK I LI + G D+ +F+ M CEP+ T ++K MF +
Sbjct: 374 TPNSKSCNIILRHLI----ERGEKDEAFDVFRKMIKVCEPDADTYTMVIK------MFCE 423
Query: 485 AKEL 488
KE+
Sbjct: 424 KKEM 427
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 75/185 (40%), Gaps = 32/185 (17%)
Query: 227 SRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKL 286
+ F+Y+ L+ G R EA+ F L +E + D+A ++S+ + +K + ++
Sbjct: 306 TTFIYSVLVHTYGTENRLEEAVDTF-LEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 364
Query: 287 IERMRQK---PSKRIKNM------HRKNWD----------PVLEPDLVVYNAVLNACVPS 327
++ M+ K P+ + N+ R D V EPD Y V+
Sbjct: 365 LKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEK 424
Query: 328 HQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNM 387
+ + V+K +RK G+ PS T+ VL+ EE +A + M
Sbjct: 425 KEMETADKVWKYMRKKGVFPSMHTFS------------VLINGLCEERTTQKACVLLEEM 472
Query: 388 EQRGV 392
+ G+
Sbjct: 473 IEMGI 477
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 37/264 (14%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ GL +G +A+ + + K DL VY L+ L + G AL++ N M+
Sbjct: 356 LINGLCAEGDIERALELFNEAQAKDLKPDL---VVYNSLVKGLCRQGLILHALQVMNEMV 412
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKP---------------SKRIK- 299
E+ +PDI Y+ + L ++G + + ++ K KR+K
Sbjct: 413 EE-GCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKL 471
Query: 300 ----NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
+ + W + PD++ YN+VLN + + K V F+++ G +P+A TY
Sbjct: 472 DSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITY--- 528
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+L+ F + ++ EA + M Q G+V A + L C NG A
Sbjct: 529 ---------NILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGA 579
Query: 416 MLVVEKIKSLRHSKPLEITFTGLI 439
L+ +K+ +S + TF LI
Sbjct: 580 YLLFQKLDEKGYSATAD-TFNILI 602
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 83/460 (18%), Positives = 169/460 (36%), Gaps = 62/460 (13%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERM 290
Y ++ L G + A +F+ ML +++PD+A +++V L Q G + E L+ ++
Sbjct: 179 YCTVVRGLYAHGHGYNARHLFDEMLGR-DVFPDVATFNNVLHALCQKGDVMESGALLAKV 237
Query: 291 RQK---PSKRIKNMHRKNW--DPVLE--------------PDLVVYNAVLNACVPSHQWK 331
++ +K N+ + D LE PD+V YN ++ + +
Sbjct: 238 LKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQ 297
Query: 332 GVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRG 391
++ G P TY ++ Y + G + EA +++ +G
Sbjct: 298 EAAQYLGRMMNQGCIPDDFTYNTIIDGY------------CKSGMLQEATELLKDAVFKG 345
Query: 392 VVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDC 451
V Y L LC G + A+ + + ++ + KP + + L+ G I
Sbjct: 346 FVPDRVTYCSLINGLCAEGDIERALELFNEAQA-KDLKPDLVVYNSLVKGLCRQGLILHA 404
Query: 452 ISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGY--------TF 502
+ + M ++ C P+I T N ++ + S A + + A GY T
Sbjct: 405 LQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMND---AIVKGYLPDVFTFNTL 461
Query: 503 LSGDGAPLK-----------------PDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
+ G LK PD TY+S+L A + + ++ M L GC
Sbjct: 462 IDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGC 521
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVA 605
+ + + L+ + + + + G +P + F ++ + + A
Sbjct: 522 RPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYL 581
Query: 606 LINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNAL 645
L + + T + L + +++ EK+ +
Sbjct: 582 LFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEM 621
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 80/425 (18%), Positives = 159/425 (37%), Gaps = 82/425 (19%)
Query: 242 GRPHEALRIFNLMLE-DC---------------------------------NLYPDIAAY 267
GRPH ALR+ + E C +++PD+A +
Sbjct: 155 GRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATF 214
Query: 268 HSVAVTLGQVGLLKELVKLIERMRQK---PSKRIKNMHRKNW--DPVLE----------- 311
++V L Q G + E L+ ++ ++ +K N+ + D LE
Sbjct: 215 NNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGA 274
Query: 312 ---PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLV 368
PD+V YN ++ + + ++ G P TY ++ Y
Sbjct: 275 YVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGY--------- 325
Query: 369 RAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHS 428
+ G + EA +++ +G V Y L LC G + A+ + + ++ +
Sbjct: 326 ---CKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQA-KDL 381
Query: 429 KPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKE 487
KP + + L+ G I + + M ++ C P+I T N ++ + S A
Sbjct: 382 KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAV 441
Query: 488 LFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQL 547
+ + A GY PD +T++++++ + + + + M G
Sbjct: 442 VMND---AIVKGYL----------PDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAP 488
Query: 548 DQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSN-YEKAVAL 606
D + +L +AGK + F+ ++ G P+ + + +LI+ + N E+A +
Sbjct: 489 DVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYN-ILIENFCKINQLEEASGV 547
Query: 607 INAMA 611
I M
Sbjct: 548 IVRMC 552
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 47/268 (17%), Positives = 104/268 (38%), Gaps = 37/268 (13%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY------------ 359
P YNA+++A V + V+ ++ +G+ P A T+ + ++S+
Sbjct: 104 PAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRL 163
Query: 360 ------RRCLLK-----VLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
R C K +VR + G A M R V + + + LC
Sbjct: 164 LRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQ 223
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIGT 468
G ++ ++ K+ R + T I + G +++ +++ + M + P++ T
Sbjct: 224 KGDVMESGALLAKVLK-RGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYVAPDVVT 282
Query: 469 VNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAH 528
N +++ ++ SK +E + R + G PD++TY+++++ +
Sbjct: 283 YNTLMRGLCKD---SKVQEAAQYLGRMMNQGCI----------PDDFTYNTIIDGYCKSG 329
Query: 529 QWEYFEYVYKGMALSGCQLDQTKHAWLL 556
+ + K G D+ + L+
Sbjct: 330 MLQEATELLKDAVFKGFVPDRVTYCSLI 357
>gi|125526118|gb|EAY74232.1| hypothetical protein OsI_02112 [Oryza sativa Indica Group]
Length = 556
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 186/476 (39%), Gaps = 60/476 (12%)
Query: 231 YTKLLAILGKAGRPHEALRIFNLMLEDCNLY------PDIAAYHSVAV-TLGQVGLLKEL 283
+ L+ + GR ALR F + + Y P A+ ++AV L + G +
Sbjct: 106 FAPLVRRYARLGRAPAALRAFQFLRRHPDRYMAGGDIPAAASLLNMAVDALCKEGHPRAA 165
Query: 284 VKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKS 343
V+L ER R++ +P PD YN +L+ + + V ++ ++R +
Sbjct: 166 VELFERWRRE-------------EPDSPPDERAYNILLHGWSRAGRLDKVGKLWAEMRLA 212
Query: 344 GLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELA 403
G++P+ TYG L+ + + ++A+A + M + G+ +
Sbjct: 213 GVRPTVVTYG------------TLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIV 260
Query: 404 CCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-C 462
L GR+QDA V+EK L P TF L++ G + S+ + M +
Sbjct: 261 YALAQAGRFQDAHKVLEKF-PLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGI 319
Query: 463 EPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLE 522
P T N +++N + + Y+ + G+G PD+ TY +++
Sbjct: 320 SPTTRTYNYFFMTFAKNS-----------DVESGMNFYSKMIGNG--YSPDQLTYVLLVK 366
Query: 523 ASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHA---FDSLLEAG 579
+ A++ E + + M G + D L+ R H E A F+ + + G
Sbjct: 367 MLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRR---HQFEEACAEFEDMFKRG 423
Query: 580 EIPHPLFFTEMLIQAIVQSNYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLE 639
+P + + +++ + L N M P T+L S D+ D +E
Sbjct: 424 IVPQYITYQKLMRELKRLGLVRLIQKLTNLMRSVPHS------TKLPGSYRDKEGDDSME 477
Query: 640 KLLNALCNCNAASSEITVSNLSRALHALCRSEK-ERDLSSSAHFGSQAIDISPLHG 694
K L A S + + L L E+ + +++ SAH I + P++
Sbjct: 478 KRKLILQKAQAVSDVLKECKDPKELGKLKEDEETDVEVADSAHLQMSWIAMRPVYA 533
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/379 (19%), Positives = 155/379 (40%), Gaps = 58/379 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+++T + K G+ EA+++F+ M E+ + P++ +++V LG G E E
Sbjct: 261 YLFTTAINAFCKGGKVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 319
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M ++ +EP L+ Y+ ++ + + ++V K++ K G P+
Sbjct: 320 KMVERG---------------MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 364
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
Y L+ +F E G +N+A+ M +G+ T+S Y L C
Sbjct: 365 VIVY------------NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 412
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
NG+ +A +++++ S+ + + +FT +I D + M + P G
Sbjct: 413 NGQADNAERLLKEMLSIGFNVN-QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 471
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
+ ++ ++ SKA EL+ + FL+ D T +++L A
Sbjct: 472 LLTTLISGLCKHGKHSKALELW----------FQFLN---KGFVVDTRTSNALLHGLCEA 518
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
+ + + K + GC +D+ + L+ K L+ AF +F
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK---LDEAF------------MFL 563
Query: 588 TEMLIQAIVQSNYEKAVAL 606
EM+ + + NY ++ +
Sbjct: 564 DEMVKRGLKPDNYTYSILI 582
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 107/282 (37%), Gaps = 54/282 (19%)
Query: 336 VFKQLRKSGLKPSAATYGLAMES------YRRC----------------LLKVLVRAFWE 373
VF L G+ PS T + + S +++C L + AF +
Sbjct: 213 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCK 272
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
GK+ EAV ME+ GV + + L GR+ +A + EK+ R +P I
Sbjct: 273 GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE-RGMEPTLI 331
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T++ L+ I D + + M K PN+ N ++ + +KA E+ +
Sbjct: 332 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
S G + S TY+++++ Q + E + K M G ++Q
Sbjct: 392 V---SKGLSLTSS----------TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 553 AWLLVEASRAGKCHLLEH-AFDSLLEAGEIPHPLFFTEMLIQ 593
++ C L H FDS L F EML++
Sbjct: 439 TSVI--------CLLCSHLMFDSALR--------FVGEMLLR 464
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 14/183 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ PD+ ++ +NA + + +F ++ ++G+ P+ T+ ++ C
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMC------- 308
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
G+ +EA M +RG+ T Y L L R DA V++++ +
Sbjct: 309 -----GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK-KGFP 362
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P I + LI S ++ G ++ I I M T N ++K Y +N A+ L
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 489 FEE 491
+E
Sbjct: 423 LKE 425
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/360 (18%), Positives = 145/360 (40%), Gaps = 35/360 (9%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
P V +N +L + + Q+ VF + Q+ G+ P T L +L+ +F
Sbjct: 67 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYT------------LNILINSF 114
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
++ A + + + + G + + L LC G+ DA+ + +K+ +P
Sbjct: 115 CHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG-EGFQPN 173
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+T+ LI G+ + I + + M + +C+P++ +++ ++ ++A LF
Sbjct: 174 VVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFS 233
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQT 550
+ G + PD +TY+S++ + +W++ + M S D
Sbjct: 234 KMV-------------GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVV 280
Query: 551 KHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYEKAVALINAM 610
+ ++ + GK D ++ G P+ + + ++ +QS ++AV + + M
Sbjct: 281 IFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 340
Query: 611 ---AYAPFHITERQWTELFESNEDRISR-DKLEKLLNALCNCNAASSEITVSNLSRALHA 666
YAP I+ + +I R DK L +C + +T + L H
Sbjct: 341 VHNGYAPNVISYNTLINGYC----KIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHV 396
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 126/314 (40%), Gaps = 46/314 (14%)
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A SVL + L + D + + L + GK G +AL +F+ M+ + P++ Y
Sbjct: 123 AFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIG---DALHLFDKMIGE-GFQPNVVTYG 178
Query: 269 SVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSH 328
++ L +VG ++L+ M Q +PD+VVY +++++
Sbjct: 179 TLINGLCKVGNTNAAIRLLRSMEQGNC---------------QPDVVVYTSIIDSLCKDR 223
Query: 329 QWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNME 388
Q F +F ++ G+ P TY L+ + + + M
Sbjct: 224 QVTEAFNLFSKMVGQGISPDIFTY------------TSLIHSLCNLCEWKHVTTLLNQMI 271
Query: 389 QRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHI 448
++ ++ + LC G+ +A VV+ + +R +P +T+ L+ +
Sbjct: 272 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI-IRGVEPNVVTYNALMDGHCLQSEM 330
Query: 449 DDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDG 507
D+ + +F M + PN+ + N ++ Y + KA LFEE +
Sbjct: 331 DEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE----------- 379
Query: 508 APLKPDEYTYSSML 521
L P+ TY++++
Sbjct: 380 --LIPNTVTYNTLM 391
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 151/367 (41%), Gaps = 53/367 (14%)
Query: 161 LVDRLS-EREMTAKNWKFVRIMNQ--SGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWVY 217
++D L +R++T F +++ Q S +FT ++ L L + W+ ++L+ +
Sbjct: 215 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCE---WKHVTTLLNQMI 271
Query: 218 GLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQV 277
K D+ +++ ++ L K G+ EA + ++M+ + P++ Y+++
Sbjct: 272 NSKIMPDV---VIFSTVVDALCKEGKITEAHDVVDMMIIR-GVEPNVVTYNALMDGHCLQ 327
Query: 278 GLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVF 337
+ E VK+ + M + N + P+++ YN ++N + ++F
Sbjct: 328 SEMDEAVKVFDTM-------VHNGY--------APNVISYNTLINGYCKIQRMDKATYLF 372
Query: 338 KQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTAS 397
+++ + L P+ TY M G++ +A+A M G + +
Sbjct: 373 EEMCQKELIPNTVTYNTLMHX-------------CHVGRLQDAIALFHEMVAHGQIPDLA 419
Query: 398 VYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQH 457
Y L LC +AM +++ I+ ++I +T +I G ++ IF +
Sbjct: 420 TYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQI-YTIVIDGMCRAGELEAARDIFSN 478
Query: 458 MKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYT 516
+ PN+ T M+ R + +A +LF E DG PD T
Sbjct: 479 LSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEM-------------DGNGCSPDGCT 525
Query: 517 YSSMLEA 523
Y+++ +
Sbjct: 526 YNTITQG 532
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/387 (19%), Positives = 153/387 (39%), Gaps = 43/387 (11%)
Query: 243 RPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMH 302
R +A+ + + M+E PD + ++ L E V L++RM Q+
Sbjct: 170 RISDAVALVDQMVE-MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC------- 221
Query: 303 RKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRC 362
+P+LV Y V+N F + ++ + ++ + Y ++S
Sbjct: 222 --------QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS---- 269
Query: 363 LLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKI 422
L + E+ +A+ ME +GV Y L CLCN RW DA ++ +
Sbjct: 270 ----LCKYRHED----DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 423 KSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDM 481
R P +TF LI + + G + + ++ M K +P+I T ++++ + +D
Sbjct: 322 IE-RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 482 FSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMA 541
+AK +FE +S D P+ TY++++ A + + +++ M+
Sbjct: 381 LDEAKHMFE----------LMISKD---CFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 542 LSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLIQAIVQSNYE 601
G + + L+ +A C + F ++ G P+ + + +L E
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 602 KAVALINAMAYAPFHITERQWTELFES 628
KA+ + + + T + + E
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEG 514
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 141/378 (37%), Gaps = 78/378 (20%)
Query: 206 WRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIA 265
+R L+ +++K + Y+ L++ L R +A R+ + M+E + P++
Sbjct: 273 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPNVV 331
Query: 266 AYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACV 325
++++ + G L E KL + M ++ ++PD+ Y++++N
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRS---------------IDPDIFTYSSLINGFC 376
Query: 326 PSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVR 385
+ +F+ + P+ TY L+ F + +I+E V R
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTY------------NTLINGFCKAKRIDEGVELFR 424
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDG 445
M QRG+VG +T+T LI
Sbjct: 425 EMSQRGLVGNT------------------------------------VTYTTLIHGFFQA 448
Query: 446 GHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLS 504
D+ +F+ M D PNI T N +L +N KA +FE R+
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-------- 500
Query: 505 GDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGK 564
++P YTY+ M+E A + E ++ ++L G + D + ++ R G
Sbjct: 501 -----MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 565 CHLLEHAFDSLLEAGEIP 582
+ F + E G +P
Sbjct: 556 KEEADALFRKMREDGPLP 573
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/389 (18%), Positives = 150/389 (38%), Gaps = 41/389 (10%)
Query: 311 EPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRA 370
EP +V +++LN + + Q+ + G +P T+ L+
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF------------TTLIHG 199
Query: 371 FWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKP 430
+ K +EAVA V M QRG Y + LC G A ++ K+++ +
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAN 259
Query: 431 LEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELF 489
+ + ++ +I S H DD +++F M++ PN+ T ++++ + +S A L
Sbjct: 260 V-VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 490 EETT--RANSSGYTFLSGDGAPLK--------------------PDEYTYSSMLEASATA 527
+ + N + TF + A +K PD +TYSS++
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
+ + +++++ M C + + L+ +A + F + + G + + + +
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Query: 588 TEMLIQAIVQS-NYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALC 646
T LI Q+ + + A + M H + L + KLEK +
Sbjct: 439 TT-LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG---LCKNGKLEKAMVVFE 494
Query: 647 NCNAASSEITVSNLSRALHALCRSEKERD 675
+ E T+ + + +C++ K D
Sbjct: 495 YLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 150/383 (39%), Gaps = 54/383 (14%)
Query: 145 WHPEKRWRSEAEAIRVLVDRLSE-REM-TAKNWKFVRIMNQSGLMFTEGQMLK-LLKGLG 201
W PE + ++ ++++ L R + A+N+ F +G + E + L++ G
Sbjct: 108 WAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYG 167
Query: 202 DKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLY 261
G +++++ V + +K S + LL IL K GR + A +F+ ML +
Sbjct: 168 KAGLFQESVQVFN---SMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVT 224
Query: 262 PDIAAYHSVAVTLGQVGLLKE---LVKLIERMRQKPS---------------------KR 297
PD ++ + + ++ E K + R + P
Sbjct: 225 PDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNV 284
Query: 298 IKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAME 357
+ M +K+ + L PD+V Y ++ H+ VF+++ GLKP+ TY
Sbjct: 285 VNGMVKKSTN--LNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITY----- 337
Query: 358 SYRRCLLKVLVRAFWEEGKINEAVAAVRN-MEQRGVVGTASVYYELACCLCNNGRWQDAM 416
L++ E KI++ + G + L CN G DA+
Sbjct: 338 -------NTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDAL 390
Query: 417 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMK--------DHCEPNIGT 468
V EK+ L + +P T++ LI + G+ + +F + D C P +
Sbjct: 391 EVFEKMMVL-NVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAA 449
Query: 469 VNAMLKVYSRNDMFSKAKELFEE 491
+M + RN +KA+ +F +
Sbjct: 450 YKSMFEFLCRNGKTAKAERVFRQ 472
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 105/496 (21%), Positives = 188/496 (37%), Gaps = 77/496 (15%)
Query: 204 GSWRQAMSVLDWVYGLKDKRD----LKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCN 259
G R ++++ +K + + L+ RF + L+ GKAG E++++FN M +
Sbjct: 129 GRARNLNVARNFLFSIKRRSNGTVKLEDRF-FNSLIRSYGKAGLFQESVQVFNSM-KSVG 186
Query: 260 LYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE-----PDL 314
+ P + ++S+ L+ L++R R NM + +D +L PD
Sbjct: 187 VSPSVVTFNSL------------LLILLKRGRT-------NMAQSVFDEMLSTYGVTPDT 227
Query: 315 VVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEE 374
+N ++ + F FK++ + P TY LV
Sbjct: 228 YTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTY------------NTLVDGLCRA 275
Query: 375 GKINEAVAAVRNMEQRGVVGTASV--YYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
GK+N A V M ++ V Y L C +A++V E++ S + KP E
Sbjct: 276 GKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVS-KGLKPNE 334
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHM--KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
IT+ LI + ID IF+ P+ T+N ++ + + A E+FE
Sbjct: 335 ITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFE 394
Query: 491 ETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALS------- 543
+ N ++PD TYS ++ +E E ++ ++
Sbjct: 395 KMMVLN-------------VRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDD 441
Query: 544 GCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEMLI-----QAIVQS 598
GC + + R GK E F L++ G PL F ++LI + ++
Sbjct: 442 GCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRG-TQDPLSF-KILIKGHCREGTFEA 499
Query: 599 NYEKAVALINAMAYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVS 658
YE V ++ + L + E ++ LEK++ + + + S
Sbjct: 500 GYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKS---SHVPETSTFHS 556
Query: 659 NLSRALHALCRSEKER 674
L+R L C E R
Sbjct: 557 ILARLLAKGCAHESAR 572
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/389 (19%), Positives = 147/389 (37%), Gaps = 50/389 (12%)
Query: 234 LLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQK 293
L+ L +GR EA R+ L C PD+ AY+++ G L +L+ M +
Sbjct: 102 LIKKLSASGRTAEARRV----LAACG--PDVMAYNAMVAGYCGAGQLDAARRLVAEMPVE 155
Query: 294 PSKRIKNM---------HRKNWDPVLE--------PDLVVYNAVLNACVPSHQWKGVFWV 336
P N N VL+ PD+V Y +L A +K +
Sbjct: 156 PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 215
Query: 337 FKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTA 396
++R G P TY V+V +EG++++A+ ++N+ G
Sbjct: 216 LDEMRDKGCTPDIVTY------------NVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 263
Query: 397 SVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQ 456
Y + LC RW+DA ++ ++ + P +TF LI G ++ + + +
Sbjct: 264 VSYNIVLKGLCTAERWEDAEELMGEMGQ-KGCPPNVVTFNMLISFLCRKGLVEPALEVLE 322
Query: 457 HMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEY 515
+ + C PN + N +L + + KA + + G PD
Sbjct: 323 QIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD-----------LMVSRGC--YPDIV 369
Query: 516 TYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSL 575
+Y+++L A + + + + + GC + ++ ++AGK + +
Sbjct: 370 SYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 429
Query: 576 LEAGEIPHPLFFTEMLIQAIVQSNYEKAV 604
+ G P + ++ + + E A+
Sbjct: 430 VSKGLQPDIITYSTIAAGLCREDRIEDAI 458
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 149/378 (39%), Gaps = 70/378 (18%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL +G A++VLD + +R + YT LL K +A+++ + M
Sbjct: 164 LIRGLCGRGRTANALAVLDEML---RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM- 219
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
D PDI Y+ V + Q G + + IE ++ PS EP+ V
Sbjct: 220 RDKGCTPDIVTYNVVVNGICQEGRVDDA---IEFLKNLPSYGC------------EPNTV 264
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY-RRCLLKV-------- 366
YN VL + +W+ + ++ + G P+ T+ + + R+ L++
Sbjct: 265 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 324
Query: 367 --------------LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRW 412
L+ AF ++ K+++A+A + M RG Y L LC +G
Sbjct: 325 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 384
Query: 413 QDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNA 471
A+ ++ ++K + P+ I++ +I G + + + M +P+I T +
Sbjct: 385 DVAVELLHQLKD-KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 443
Query: 472 MLKVYSRNDMFSKAKELFEET----TRANSSGY--------------------TFLSGDG 507
+ R D A F + R N+ Y ++ G+G
Sbjct: 444 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 503
Query: 508 APLKPDEYTYSSMLEASA 525
P+E TY+ ++E A
Sbjct: 504 C--MPNESTYTILIEGLA 519
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 123/305 (40%), Gaps = 28/305 (9%)
Query: 367 LVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLR 426
+V + G+++ AA R + + V A Y L LC GR +A+ V++++ R
Sbjct: 132 MVAGYCGAGQLD---AARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR-R 187
Query: 427 HSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKA 485
P +T+T L+ ++ + + M+D C P+I T N ++ + A
Sbjct: 188 RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA 247
Query: 486 KELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGC 545
E + N Y +P+ +Y+ +L+ TA +WE E + M GC
Sbjct: 248 IEFLK-----NLPSYG--------CEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC 294
Query: 546 QLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEA---GEIPHPLFFTEMLIQAIVQSNYEK 602
+ L+ R G L+E A + L + G P+ L + +L Q +K
Sbjct: 295 PPNVVTFNMLISFLCRKG---LVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDK 351
Query: 603 AVALINAM----AYAPFHITERQWTELFESNEDRISRDKLEKLLNALCNCNAASSEITVS 658
A+A ++ M Y T L S E ++ + L +L + C S +
Sbjct: 352 AMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVID 411
Query: 659 NLSRA 663
L++A
Sbjct: 412 GLTKA 416
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 14/181 (7%)
Query: 312 PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAF 371
PD+V YN +L A S + + QL+ G P +Y ++
Sbjct: 366 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISY------------NTVIDGL 413
Query: 372 WEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPL 431
+ GK EA+ + M +G+ Y +A LC R +DA+ K++ + +P
Sbjct: 414 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM-GIRPN 472
Query: 432 EITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFE 490
+ + +I+ I +F +M + C PN T +++ + + +A++L +
Sbjct: 473 TVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLD 532
Query: 491 E 491
E
Sbjct: 533 E 533
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 34/184 (18%)
Query: 213 LDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAV 272
++ ++ LKDK Y ++ L KAG+ EAL + N M+ L PDI Y ++A
Sbjct: 388 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK-GLQPDIITYSTIAA 446
Query: 273 TLGQVGLLKELVKLIERMRQKPSKRIKNMHR---KNWDPVLEPDLVVYNAVLNACVPSHQ 329
GL +E RI++ R K D + P+ V+YNA++ +
Sbjct: 447 -----GLCRE-------------DRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRE 488
Query: 330 WKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQ 389
+F + +G P+ +TY +L+ EG I EA + +
Sbjct: 489 THSAIDLFAYMIGNGCMPNESTY------------TILIEGLAYEGLIKEARDLLDELCS 536
Query: 390 RGVV 393
RGVV
Sbjct: 537 RGVV 540
>gi|195650415|gb|ACG44675.1| hypothetical protein [Zea mays]
Length = 558
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 155/360 (43%), Gaps = 52/360 (14%)
Query: 317 YNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEGK 376
YN +L+A + +F+ + + P A ++ A++ CL + +G
Sbjct: 148 YNDILSALARAGDHATAVALFRAMP---VAPDAHSFATAVQ----CLCR--------QGA 192
Query: 377 INEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFT 436
+EA A+ M RG + + + + CLC GR AM V++ + L +P T+
Sbjct: 193 PDEAKLALDEMVARGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMLGL-GCEPTIRTYN 251
Query: 437 GLIISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRA 495
L+ G +++ + + + +KD P+I T +L + + +A +F +
Sbjct: 252 SLVGGLCYVGRLEEALELLKKLKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIFHDAIGM 311
Query: 496 NSSGYTF-----LSG---DGAPLK-----------------PDEYTY----SSMLEASAT 526
S TF L+G +G PLK PD+ ++ +++L A T
Sbjct: 312 GLSPTTFTYNALLNGXCKEGNPLKAFALLMEMCGNNDAACLPDKTSFGIVLTALLRAGET 371
Query: 527 AHQWEYFEYVYK-GMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPL 585
+ W+ ++ + + G + G LD A+ A E F ++ +G P+
Sbjct: 372 SAAWQTYKRMERAGFEVDGRALDTLARGLCRRCATDASALGDAEEVFGKVVASGH--EPV 429
Query: 586 FFTEMLI-QAIVQSN-YEKAVALINAMAYAPFHITERQWTELFESNEDRI-SRDKLEKLL 642
+T L+ QA+ + + AVAL+ M + + +R +T++ + DR +RD L+ L+
Sbjct: 430 SYTYCLMAQALARGGEVDAAVALLEDMVRKGYALRKRAYTDVVRALCDRGRARDALQVLV 489
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 126/339 (37%), Gaps = 52/339 (15%)
Query: 149 KRWRSEAEAIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQ 208
+ +R +V L +R K + + M G T L+ GL G +
Sbjct: 206 RGFRPSVATFSAVVGCLCKRGRVTKAMEVLDAMLGLGCEPTIRTYNSLVGGLCYVGRLEE 265
Query: 209 AMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYH 268
A+ +L LKD + +T +L K GR EA IF+ + L P Y+
Sbjct: 266 ALELLKK---LKDSPLTPDIYTFTIVLDGFCKVGRTEEATAIFHDAI-GMGLSPTTFTYN 321
Query: 269 SVAVTLGQVG-LLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPS 327
++ + G LK L+E N D PD + VL A + +
Sbjct: 322 ALLNGXCKEGNPLKAFALLMEMC-------------GNNDAACLPDKTSFGIVLTALLRA 368
Query: 328 HQWKGVFWVFKQLRKSGLK------------------PSAATYGLAME------------ 357
+ + +K++ ++G + A+ G A E
Sbjct: 369 GETSAAWQTYKRMERAGFEVDGRALDTLARGLCRRCATDASALGDAEEVFGKVVASGHEP 428
Query: 358 -SYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAM 416
SY CL + +A G+++ AVA + +M ++G Y ++ LC+ GR +DA+
Sbjct: 429 VSYTYCL---MAQALARGGEVDAAVALLEDMVRKGYALRKRAYTDVVRALCDRGRARDAL 485
Query: 417 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIF 455
V+ + +R P F L+ G D ++++
Sbjct: 486 QVLVLVMIVRDFVPGRNAFEALLGELSRQGRWADAMTVY 524
>gi|255661000|gb|ACU25669.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 376
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 132/327 (40%), Gaps = 46/327 (14%)
Query: 240 KAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIK 299
++G A R++ ++E + PD Y+++ +V +K+ +L E M + ++ +
Sbjct: 2 ESGDIDGAERVYKEIVES-KVSPDAVVYNTMLNGYFRVAKIKDCFELWEMMGNEGNRSVS 60
Query: 300 NMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESY 359
+ +N ++ + V +++ ++KS + TYG
Sbjct: 61 S----------------FNIMMRGLFDXGKVDEVISIWELMKKSDFVEDSITYG------ 98
Query: 360 RRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVV 419
+LV F + G IN+++ + EQ+G V A Y + LC A+ V+
Sbjct: 99 ------ILVHGFCKNGXINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKAVSVL 152
Query: 420 -EKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKD-HCEPNIGTVNAMLKVYS 477
+ IKS KP + LI + +D I +F+ M HC P I T N ++
Sbjct: 153 NDMIKS--GCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTVHCSPTIITYNTLINGLC 210
Query: 478 RNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVY 537
+N+MF +A +L +E L P TYS +++ H+ E ++
Sbjct: 211 KNEMFGEAYDLVKEMLEKG-------------LNPSVITYSMLMKGLCLDHKVERALQLW 257
Query: 538 KGMALSGCQLDQTKHAWLLVEASRAGK 564
+ G + D H L+ GK
Sbjct: 258 NQVISKGFKPDVQMHNILIHGLCSVGK 284
Score = 39.3 bits (90), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 55/300 (18%), Positives = 119/300 (39%), Gaps = 33/300 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L+ G G +++ VL+ + K + F Y+ ++ L K +A+ + N M+
Sbjct: 100 LVHGFCKNGXINKSLHVLEMA---EQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNDMI 156
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
+ P+ Y+++ L ++ +++ M +H P ++
Sbjct: 157 KS-GCKPNAHVYNTLINGLVGASKFEDAIRVFREM--------GTVH-------CSPTII 200
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVRAFWEEG 375
YN ++N + + + + K++ + GL PS TY + M+ CL +
Sbjct: 201 TYNTLINGLCKNEMFGEAYDLVKEMLEKGLNPSVITYSMLMKGL--CL----------DH 248
Query: 376 KINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITF 435
K+ A+ + +G ++ L LC+ G+ Q A+ + + + P +T
Sbjct: 249 KVERALQLWNQVISKGFKPDVQMHNILIHGLCSVGKTQRALSLYFXMNRWK-CAPNLVTH 307
Query: 436 TGLIISSMDGGHIDDCISIFQH-MKDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTR 494
L+ G I + + I+ +++ EP+I + N LK + A ++ R
Sbjct: 308 NTLMEGFYKDGDIRNALVIWARVLRNGLEPDIISYNITLKGLCSCNRICDAILFLHDSVR 367
>gi|168024876|ref|XP_001764961.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683770|gb|EDQ70177.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 98/460 (21%), Positives = 184/460 (40%), Gaps = 59/460 (12%)
Query: 157 AIRVLVDRLSEREMTAKNWKFVRIMNQSGLMFTEGQMLKLLKGLGDKGSWRQAMSVLDWV 216
A V++ + + K+ + V M ++ + LK L G +G +A ++D V
Sbjct: 118 AYSVMIALYNREGLFEKSEQIVTEMRRNNVTPDRDNWLKQLNTYGQQGKIEEAERIMDTV 177
Query: 217 YGLKDKRDLKSRFV-YTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLG 275
++ + V Y ++ GKA +A R+ M E+ +L PD Y + G
Sbjct: 178 ----EESGMSLGLVGYNSMITAYGKACLYDKAARLVEKMREE-DLVPDSITYSCMIGACG 232
Query: 276 QVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFW 335
+VG LKE + M KR++ ++P +N +++ + +G+
Sbjct: 233 RVGKLKEALSWFAEM-----KRLE----------IKPASSNFNTLISLYGKAKDVEGIVR 277
Query: 336 VFKQLRKSGLKPSAATYGLAMESYRRC--------LLKVLVRAFWEE-----GKI----- 377
V +++K G KP T A+ +Y R +L +L A W E G +
Sbjct: 278 VITEMKKYGCKPDWQTLDAAVRAYDRAGLIKDVTEILNLLRDAGWVEETGSYGTLLHVYL 337
Query: 378 -----NEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLE 432
EA+ M + G+ + L C + + A V ++++ + LE
Sbjct: 338 KCNLPKEALRIFLAMRKAGMAPKEYMCRSLICTFRDAEMFDGAKSVFKEMQVAGVTPSLE 397
Query: 433 ITFTGLIISSMDGGHIDDCISIFQHMKDHCEP-NIGTVNAMLKVYSRNDMFSKAKELFEE 491
+ T + + M+G + + +F ++ + +I N M+ VY R DM A ++
Sbjct: 398 SSCTMIYVYGMNG-DVKEAEGLFHSLRSSVKRLDIFAYNVMINVYMRCDMPEGAIKV--- 453
Query: 492 TTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTK 551
Y + D L PD YTY SML + E +Y + S +LD+
Sbjct: 454 --------YKLMEED--HLLPDAYTYHSMLRMCQKCNLPAQAEEIYWRLRNSDVELDEVM 503
Query: 552 HAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
+L ++ + F +++ G +P+ + F M+
Sbjct: 504 CNCVLNTCAKFLPLEEMHKLFQEMIDVGYVPYNITFNVMI 543
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/336 (18%), Positives = 131/336 (38%), Gaps = 44/336 (13%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
F Y ++ + + P A++++ LM ED +L PD YHS+ + L + ++
Sbjct: 432 FAYNVMINVYMRCDMPEGAIKVYKLMEED-HLLPDAYTYHSMLRMCQKCNLPAQAEEIYW 490
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
R+R +E D V+ N VLN C + + +F+++ G P
Sbjct: 491 RLRNSD---------------VELDEVMCNCVLNTCAKFLPLEEMHKLFQEMIDVGYVPY 535
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
T+ V++ + + G A A++ +Q G S + L
Sbjct: 536 NITF------------NVMIDLYGKAGMPERAHKALKLAQQFGSADKIS-FSTLVHAYAK 582
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDH-CEPNIG 467
+ + + ++++ + LE + ++ + G ++ + M++ ++
Sbjct: 583 KQDFPNMEAALWEMQNAGYGSSLE-AYNSILDAYGKAGQMEKVSDVLARMENSGMRMDLA 641
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
+ N ++ Y +N M ++ + LF + PD +TY++++ A
Sbjct: 642 SYNILINTYGKNYMIAEMETLFRTMQEEG-------------VVPDRWTYNTIIRTYGFA 688
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAG 563
+ Y +K M +G D+ + L+ RAG
Sbjct: 689 DYPDRAVYWFKAMQDAGISPDRVTYMILVSTFERAG 724
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 135/314 (42%), Gaps = 37/314 (11%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
L++GL G +A+ +L + G + D+ + Y L+ K+ ++A +F +
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVT---YNTLIQGFCKSNELNKASEMFKDVK 268
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE---RMRQKPSKRIKNMHRKNWDPVLE- 311
PD+ Y S+ + G ++E L++ R+ P+ N+ + E
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 312 ----------------PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLA 355
PD+V + ++++ Q F +++++ G+ P+A TY
Sbjct: 329 LTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY--- 385
Query: 356 MESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDA 415
+L+ A E ++ +A + + + ++ +Y + C G+ +A
Sbjct: 386 ---------SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 416 MLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLK 474
++VE+++ + KP +ITFT LII G + + +SIF M C P+ TV+++L
Sbjct: 437 NVIVEEMEK-KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Query: 475 VYSRNDMFSKAKEL 488
+ M +A L
Sbjct: 496 CLLKAGMAKEAYHL 509
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 109/270 (40%), Gaps = 30/270 (11%)
Query: 334 FWVF----KQLRKSGLKPSAATYGLAMES----YRRCLLKVLVRAFWEEGKINEAVAAVR 385
FW + + L K+GL A M+S LL LV +F E+GK++ A A +
Sbjct: 103 FWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL- 161
Query: 386 NMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVE---KIKSLRHSKPLEITFTGLIISS 442
++ V G V L L R +DAM + + + +S +K I GL
Sbjct: 162 -LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC--- 217
Query: 443 MDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYT 501
G + + + M CEP+I T N +++ + +++ +KA E+F++
Sbjct: 218 -GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK-------- 268
Query: 502 FLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASR 561
G+ PD TY+SM+ A + + M G L+ ++
Sbjct: 269 ----SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 562 AGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
AG+ E ++ G P + FT ++
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/379 (19%), Positives = 155/379 (40%), Gaps = 58/379 (15%)
Query: 229 FVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIE 288
+++T + K G+ EA+++F+ M E+ + P++ +++V LG G E E
Sbjct: 250 YLFTTAINAFCKGGKVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 308
Query: 289 RMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPS 348
+M ++ +EP L+ Y+ ++ + + ++V K++ K G P+
Sbjct: 309 KMVERG---------------MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPN 353
Query: 349 AATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
Y L+ +F E G +N+A+ M +G+ T+S Y L C
Sbjct: 354 VIVY------------NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 401
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
NG+ +A +++++ S+ + + +FT +I D + M + P G
Sbjct: 402 NGQADNAERLLKEMLSIGFNVN-QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 460
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATA 527
+ ++ ++ SKA EL+ + FL+ D T +++L A
Sbjct: 461 LLTTLISGLCKHGKHSKALELW----------FQFLN---KGFVVDTRTSNALLHGLCEA 507
Query: 528 HQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFF 587
+ + + K + GC +D+ + L+ K L+ AF +F
Sbjct: 508 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK---LDEAF------------MFL 552
Query: 588 TEMLIQAIVQSNYEKAVAL 606
EM+ + + NY ++ +
Sbjct: 553 DEMVKRGLKPDNYTYSILI 571
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 107/282 (37%), Gaps = 54/282 (19%)
Query: 336 VFKQLRKSGLKPSAATYGLAMES------YRRC----------------LLKVLVRAFWE 373
VF L G+ PS T + + S +++C L + AF +
Sbjct: 202 VFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCK 261
Query: 374 EGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEI 433
GK+ EAV ME+ GV + + L GR+ +A + EK+ R +P I
Sbjct: 262 GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVE-RGMEPTLI 320
Query: 434 TFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEET 492
T++ L+ I D + + M K PN+ N ++ + +KA E+ +
Sbjct: 321 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 380
Query: 493 TRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKH 552
S G + S TY+++++ Q + E + K M G ++Q
Sbjct: 381 V---SKGLSLTSS----------TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 427
Query: 553 AWLLVEASRAGKCHLLEH-AFDSLLEAGEIPHPLFFTEMLIQ 593
++ C L H FDS L F EML++
Sbjct: 428 TSVI--------CLLCSHLMFDSALR--------FVGEMLLR 453
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 76/183 (41%), Gaps = 14/183 (7%)
Query: 310 LEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVLVR 369
+ PD+ ++ +NA + + +F ++ ++G+ P+ T+ ++ C
Sbjct: 245 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMC------- 297
Query: 370 AFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSK 429
G+ +EA M +RG+ T Y L L R DA V++++ +
Sbjct: 298 -----GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK-KGFP 351
Query: 430 PLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAKEL 488
P I + LI S ++ G ++ I I M T N ++K Y +N A+ L
Sbjct: 352 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 411
Query: 489 FEE 491
+E
Sbjct: 412 LKE 414
>gi|212275340|ref|NP_001130930.1| uncharacterized protein LOC100192035 [Zea mays]
gi|195614146|gb|ACG28903.1| hypothetical protein [Zea mays]
gi|219885707|gb|ACL53228.1| unknown [Zea mays]
gi|413935208|gb|AFW69759.1| hypothetical protein ZEAMMB73_548432 [Zea mays]
Length = 748
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/402 (18%), Positives = 158/402 (39%), Gaps = 69/402 (17%)
Query: 226 KSRFVYTKLLAILGKAGRPHEALRIFNLMLEDCNLYPDIAAYHSVAVTLGQVGLLKELVK 285
++ Y +L + GR A RI+N M+ D + PD++ Y+++ G ++ V+
Sbjct: 206 RTALSYNAVLKAILCRGREAMARRIYNAMIAD-GVAPDVSTYNTLIWGFGLCKKMETAVR 264
Query: 286 LIERMRQKPSKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGL 345
+ M+ + PD+ YN +LNA V + + VF ++ G
Sbjct: 265 VFGDMKGHG---------------VTPDVTTYNTLLNAWVRAGDLESARKVFDEMAGEGT 309
Query: 346 KPSAATYGLAMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACC 405
+ ++ +Y V+++ + E ++ EAVA M ++G+ + + L
Sbjct: 310 ERNSVSY------------NVMIKGYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALMPG 357
Query: 406 LCNN-GRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISI------FQHM 458
LC++ GR +A V+ + R + + F L+ + G +D + + F+H+
Sbjct: 358 LCDDQGRVAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKAGDLDGALEVHWKSGQFKHV 417
Query: 459 ----------------KDHCEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
CE I ++ +++ + + S + E + A + F
Sbjct: 418 LVDPRQYGVLMEGLCAGGKCETAIEVLDELME---KGTLLSPKSPVLEAS--AYNPVIEF 472
Query: 503 LSGDGAPLKP-------------DEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQ 549
L +G+ K D+ ++S++ A E + + M D
Sbjct: 473 LCSNGSTAKAETFFRQLMKKGVDDKAAFNSLIRGHAKEGVPEAAQEILAIMTRREVPTDP 532
Query: 550 TKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEML 591
HA L+ + + + A DS+++ G +P P F ++
Sbjct: 533 ESHALLVDSFLKKNEPADAKTALDSMMQQGHLPSPALFKSVM 574
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 120/298 (40%), Gaps = 44/298 (14%)
Query: 286 LIERMRQKP-SKRIKNMHRKNWDPVLEPDLVVYNAVLNACVPSHQWKGVFWVFK-QLRKS 343
++ +R++P + R++N R P L+ LV + V++ + + F+ R+
Sbjct: 75 VLHMIRRRPWTTRLENSIRL-LSPTLDAPLV--HGVISGAASAGRADLALQFFRFAYRRG 131
Query: 344 GLKPSAATYGL---AMESYR-----RCL----------------LKVLVRAFWEEGKINE 379
G P AT+ L A+ S R RCL L L+ A+ E
Sbjct: 132 GFSPEGATFALLVPALASRRMLNHARCLVLDTMPSFSVAPDEPTLAALISAYGRAAIPQE 191
Query: 380 AVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRHSKPLEITFTGLI 439
AV R M GV TA Y + + GR A + + + P T+ LI
Sbjct: 192 AVKLFRMMPNIGVPRTALSYNAVLKAILCRGREAMARRIYNAMIA-DGVAPDVSTYNTLI 250
Query: 440 ISSMDGGHIDDCISIFQHMKDH-CEPNIGTVNAMLKVYSRNDMFSKAKELFEETTRANSS 498
++ + +F MK H P++ T N +L + R A+++F+E
Sbjct: 251 WGFGLCKKMETAVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESARKVFDE------- 303
Query: 499 GYTFLSGDGAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLL 556
++G+G + + +Y+ M++ ++ E ++ MA G +L + A L+
Sbjct: 304 ----MAGEGT--ERNSVSYNVMIKGYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALM 355
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 25/216 (11%)
Query: 417 LVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEPNIG------TVN 470
LV++ + S + P E T LI + + + +F+ M PNIG + N
Sbjct: 159 LVLDTMPSFSVA-PDEPTLAALISAYGRAAIPQEAVKLFRMM-----PNIGVPRTALSYN 212
Query: 471 AMLKVYSRNDMFSKAKELFEETTRANSSGYTFLSGDGAPLKPDEYTYSSMLEASATAHQW 530
A+LK + + +E Y + DG + PD TY++++ +
Sbjct: 213 AVLKA-----ILCRGREAMARRI------YNAMIADG--VAPDVSTYNTLIWGFGLCKKM 259
Query: 531 EYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCHLLEHAFDSLLEAGEIPHPLFFTEM 590
E V+ M G D T + LL RAG FD + G + + + M
Sbjct: 260 ETAVRVFGDMKGHGVTPDVTTYNTLLNAWVRAGDLESARKVFDEMAGEGTERNSVSYNVM 319
Query: 591 LIQAIVQSNYEKAVALINAMAYAPFHITERQWTELF 626
+ + + E+AVAL MA ++E+ + L
Sbjct: 320 IKGYVEGNRVEEAVALFAEMAEKGLRLSEKTFAALM 355
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 138/335 (41%), Gaps = 59/335 (17%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL+ L D G A V D + ++ F + L +AGR +AL++ + M
Sbjct: 151 LLQALCDAGRMELAQRVFDAMPA-------RNEFSFGILARGYCRAGRSIDALKVLDGMP 203
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLEPDLV 315
++ ++V + GL++E +L+ERMR + L P++V
Sbjct: 204 S-----MNLVVCNTVVAGFCKEGLVEEAERLVERMRVQG---------------LAPNVV 243
Query: 316 VYNAVLNACVPSHQWKGVFWVFKQLRKS---GL-KPSAATYGLAMESY--------RRCL 363
+NA ++A + + + +F+ +++ GL +P T+ + + + R L
Sbjct: 244 TFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVL 303
Query: 364 LKVL---------------VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCN 408
+ ++ + G++ EA +R M G+ + Y + LC
Sbjct: 304 VDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCK 363
Query: 409 NGRWQDAMLVVEKIKSLRHSKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIG 467
G+ DA V I+S S P +T+T L+ + G+I I M + C PN
Sbjct: 364 EGKAFDARRVENFIRSGVMS-PDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSF 422
Query: 468 TVNAMLKVYSRNDMFSKAKELFEETTRANSSGYTF 502
T N +L+ R ++A+ L E R N GY+
Sbjct: 423 TYNVLLQSLWRAGRTTEAERLLE---RMNEKGYSL 454
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 95/253 (37%), Gaps = 30/253 (11%)
Query: 355 AMESYRRCLLKVLVRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQD 414
M S + +V F +EG + EA V M +G+ + LC GR D
Sbjct: 201 GMPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLD 260
Query: 415 AMLVVEKIK-SLRHS--KPLEITFTGLIISSMDGGHIDDCISIFQHMKDHCEP---NIGT 468
A + + ++ +H +P ++TF ++ D G +D+ + M+ C + +
Sbjct: 261 AYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMR--CGGFLRRVES 318
Query: 469 VNAMLKVYSRNDMFSKAKELFEETT----RANSSGYTFL-SG-----------------D 506
N L RN +A+EL E + NS Y + SG
Sbjct: 319 YNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIR 378
Query: 507 GAPLKPDEYTYSSMLEASATAHQWEYFEYVYKGMALSGCQLDQTKHAWLLVEASRAGKCH 566
+ PD TY+S+L A + + MA GC + + LL RAG+
Sbjct: 379 SGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTT 438
Query: 567 LLEHAFDSLLEAG 579
E + + E G
Sbjct: 439 EAERLLERMNEKG 451
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 124/309 (40%), Gaps = 26/309 (8%)
Query: 196 LLKGLGDKGSWRQAMSVLDWVYGLKDKRDLKSRFVYTKLLAILGKAGRPHEALRIFNLML 255
LL KG+ A +LD + K + F Y LL L +AGR EA R+ M
Sbjct: 392 LLHAYCSKGNIAAANRILDE---MAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMN 448
Query: 256 EDCNLYPDIAAYHSVAVTLGQVGLLKELVKLIERMRQKPSKRIKNMHRKNWDPVLE---- 311
E D A + + L + L + +++ M ++ S + + V +
Sbjct: 449 EK-GYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSIS 507
Query: 312 ----PDLVVYNAVLNACVPSHQWKGVFWVFKQLRKSGLKPSAATYGLAMESYRRCLLKVL 367
PD + Y+ +++A ++ ++ + P + Y
Sbjct: 508 QRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIY------------DTF 555
Query: 368 VRAFWEEGKINEAVAAVRNMEQRGVVGTASVYYELACCLCNNGRWQDAMLVVEKIKSLRH 427
+ + + GK + A+ +R+ME++G + Y L + ++ M ++ ++K +
Sbjct: 556 IHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKE-KG 614
Query: 428 SKPLEITFTGLIISSMDGGHIDDCISIFQHM-KDHCEPNIGTVNAMLKVYSRNDMFSKAK 486
P +T+ LI S G ++ + + M ++ PNI + + ++K Y + F A+
Sbjct: 615 ISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQ 674
Query: 487 ELFEETTRA 495
+F+ R
Sbjct: 675 MVFDAALRT 683
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,826,777,825
Number of Sequences: 23463169
Number of extensions: 519809990
Number of successful extensions: 1559064
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 5383
Number of HSP's that attempted gapping in prelim test: 1503142
Number of HSP's gapped (non-prelim): 27884
length of query: 857
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 705
effective length of database: 8,792,793,679
effective search space: 6198919543695
effective search space used: 6198919543695
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)