BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003020
(856 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LS88|PP250_ARATH Pentatricopeptide repeat-containing protein At3g23020
OS=Arabidopsis thaliana GN=At3g23020 PE=2 SV=1
Length = 842
Score = 1058 bits (2736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/868 (62%), Positives = 656/868 (75%), Gaps = 43/868 (4%)
Query: 1 MFVKLQLDTSCFYVLCSTKTSP-SSNIGASASVSVSSLEKKIETQTLLNNSNSERVKRLS 59
M + L+LD S +VLCSTKT P SS + S KK++ + S++ + S
Sbjct: 1 MLLNLRLDGSSLHVLCSTKTLPISSPLDKFPSF------KKLKQNYVPGTHESDKGPQRS 54
Query: 60 KVHNHSKFDKPNGVV-HEHELKKQSFEQKPHRE-QSKNTWVDVRIGNERRTDVISAVCVN 117
+ D+ G V HE K P K+ +D + + +
Sbjct: 55 TRNG----DRGCGTVAHEVVAGKNLLLVNPSNGCVGKSGIIDGFVDKRSKDARFGGNGLV 110
Query: 118 GEVQTKCSTKWARYGGCIPSMLQALDTVKDLDEALKPWAENLSNKERSIILKEQSSWERA 177
EV TKCSTK YGGCIP++L+ALD+++D+++AL PWAE LSNKER+IILKEQ WERA
Sbjct: 111 SEVHTKCSTKRLSYGGCIPAILEALDSIEDVEDALSPWAERLSNKERTIILKEQIHWERA 170
Query: 178 LEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLID 237
+EIFEWFK + C+ELNVIHYNIMLR LGKA KW YVQSLWDEM KGI PINSTYGTLID
Sbjct: 171 VEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLID 230
Query: 238 VCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLR 297
V SKGGLK A+CWL +M++ GM+PDEVT GIV+QMYKKA EFQKAEEFFKKWS E+
Sbjct: 231 VYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDEN-- 288
Query: 298 HGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTV 357
+ SHV LSSYTYNT+IDTYGK+GQ+KEASETF +ML EGIVPTTV
Sbjct: 289 ------------KADSHV--CLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTV 334
Query: 358 TFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKM 417
TFNTMIHIYGNN QL EV SL+K M+ LHC PDTRTYNILI LH KN+ I A YF +M
Sbjct: 335 TFNTMIHIYGNNGQLGEVTSLMKTMK-LHCAPDTRTYNILISLHTKNNDIERAGAYFKEM 393
Query: 418 KEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGML 477
K+ L+PD VSYRTLLYA+SIR MV EAE LI+EMD +EIDEYTQSALTRMY+EA ML
Sbjct: 394 KDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEML 453
Query: 478 EKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVK 537
EKSW WF+RFH+AG+MSSEGYSANID YGERG++ EAER FICCQE K TV+ +NVM+K
Sbjct: 454 EKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIK 513
Query: 538 AYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVS 597
AYG+ ++ +KAC LF+SM S+G PDKC+YN+L+QILA AD+PH + YL KM+E G VS
Sbjct: 514 AYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVS 573
Query: 598 DCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYF 657
DCIPYCAVISS++KLGQL MAEEVYK+M+ +N+EPDVVVYGVLINAFAD GNV+QA SY
Sbjct: 574 DCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYV 633
Query: 658 DAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETY-KLLRSLEAS--PDVYTSNCMIDLY 714
+AM+ AG+P N+VIYNSLIKLYTKVGYL EA+ Y KLL+S + PDVYTSNCMI+LY
Sbjct: 634 EAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLY 693
Query: 715 SERSMVRQAEEIFEIMKKKGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLL 774
SERSMVR+AE IF+ MK++G+ANEFT+AMML MYK+NGRFEEAT+IAKQMRE +++D L
Sbjct: 694 SERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPL 753
Query: 775 SYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCGL--------ELT 826
SYN+VLGL+A+DGRFK+ + TFK+MV++ IQPDD TFKSLG +LMK G+ E
Sbjct: 754 SYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEI 813
Query: 827 RKKNAQSGLQAWMSTLSSV--IEECDDD 852
RKK + GL+ W+STLSS+ I +C D+
Sbjct: 814 RKKEIKRGLELWISTLSSLVGIGDCVDE 841
>sp|Q9C9U0|PP118_ARATH Pentatricopeptide repeat-containing protein At1g73710
OS=Arabidopsis thaliana GN=At1g73710 PE=2 SV=1
Length = 991
Score = 559 bits (1440), Expect = e-158, Method: Compositional matrix adjust.
Identities = 300/735 (40%), Positives = 450/735 (61%), Gaps = 36/735 (4%)
Query: 125 STKWARYGGCIPSMLQALDTVKDLDEALKPWAENLSNKERSIILKEQSSWERALEIFEWF 184
S++ +YGG IPS+L++LD+ D++ L NLS KE++++LKEQ+ WER L +F +F
Sbjct: 76 SSRKRKYGGVIPSILRSLDSSTDIETTLASLCLNLSPKEQTVLLKEQTRWERVLRVFRFF 135
Query: 185 KRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGL 244
+ + + NVIHYNI+LR LG+A KW ++ W EM+ G++P N+TYG L+DV K GL
Sbjct: 136 QSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGL 195
Query: 245 KEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRE---------- 294
+EA+ W++ M + PDEVTM VV+++K +GEF +A+ FFK W + +
Sbjct: 196 VKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDD 255
Query: 295 -----SLRHGEDTKTMIG----------KVENGSH-VNGSLSS-------YTYNTLIDTY 331
S + + K + +E H +GS SS T+NTLID Y
Sbjct: 256 FPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLY 315
Query: 332 GKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDT 391
GKAG+L +A+ F++ML+ G+ TVTFNTMIH G + L+E +SL+KKMEE PDT
Sbjct: 316 GKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDT 375
Query: 392 RTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISE 451
+TYNIL+ LHA I A Y+ K+++ L PD V++R +L+ R+MV E E +I+E
Sbjct: 376 KTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAE 435
Query: 452 MDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHV 511
MD + IDE++ + +MY+ G++ ++ F RF L +SS +A ID Y E+G
Sbjct: 436 MDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLW 495
Query: 512 LEAERAFICCQ--EGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNS 569
+EAE F + G++ VL +NVM+KAYG + ++KA +LF M + G PD+C+YNS
Sbjct: 496 VEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNS 555
Query: 570 LIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFN 629
L Q+LAG DL A+R L +M ++G C Y A+I+SY++LG L A ++Y+ M +
Sbjct: 556 LFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTG 615
Query: 630 VEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQ 689
V+P+ VVYG LIN FA+ G V++A YF ME G+ N ++ SLIK Y+KVG L+EA+
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEAR 675
Query: 690 ETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGDANEFTYAMMLIMYK 749
Y ++ E PDV SN M+ L ++ +V +AE IF +++KG + ++A M+ +YK
Sbjct: 676 RVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYK 735
Query: 750 RNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDM-VNAAIQPDD 808
G +EA +A++MRESGL+SD S+N V+ YA DG+ + F +M V + D
Sbjct: 736 GMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDW 795
Query: 809 FTFKSLGAVLMKCGL 823
TFK+L +L K G+
Sbjct: 796 GTFKTLFTLLKKGGV 810
Score = 129 bits (325), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 137/615 (22%), Positives = 251/615 (40%), Gaps = 87/615 (14%)
Query: 197 YNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINS-TYGTLIDVCSKGGLKEEAVCWLERM 255
+N ++ GKA + + +L+ EM +K VPI++ T+ T+I C G EA L++M
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEM-LKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 256 NEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWS------------------------ 291
E G+ PD T I++ ++ AG+ + A E+++K
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 292 ----------SRESLRHGEDTKTMIGK--VENGSHVNGS-----------LSSYTYNTLI 328
R S+R E + +I + V G V LSS T +I
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVI 486
Query: 329 DTYGKAGQLKEASETF-AQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHC 387
D Y + G EA F + G + +N MI YG + SL K M+
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGT 546
Query: 388 PPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEE 447
PD TYN L + A D + A R +M ++ +P +Y ++ +Y ++ +A +
Sbjct: 547 WPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVD 606
Query: 448 LISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE-GYSANIDGYG 506
L M+ G++ +E +L + E+GM+E++ +FR G S+ ++ I Y
Sbjct: 607 LYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYS 666
Query: 507 ERGHVLEAERAFICCQEGKK-LTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKC 565
+ G + EA R + ++ + V N M+ +A ++F+++ G D
Sbjct: 667 KVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC-DVI 725
Query: 566 SYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDM 625
S+ +++ + G + A +M+E+GL+SDC + V++ Y GQL E++ +M
Sbjct: 726 SFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEM 785
Query: 626 I----------------------------------RFNVEPDVVVYGVLINAFADVGNVK 651
+ +N + + F+ +G
Sbjct: 786 LVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYA 845
Query: 652 QAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMI 711
A + S +P YN++I Y+ G + A + Y ++ PD+ T ++
Sbjct: 846 YALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLV 905
Query: 712 DLYSERSMVRQAEEI 726
+Y + MV + +
Sbjct: 906 GIYGKAGMVEGVKRV 920
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 120/607 (19%), Positives = 220/607 (36%), Gaps = 118/607 (19%)
Query: 192 LNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCW 251
++ + +N M+ T G S +SL +M KGI P TY L+ + + G E A+ +
Sbjct: 338 IDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEY 397
Query: 252 LERMNEGGMEPDEVT-----------------------------------MGIVVQMYKK 276
++ + G+ PD VT + +++QMY
Sbjct: 398 YRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVN 457
Query: 277 AGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVNGSLSSY-------------T 323
G +A+ F+++ L + E G V Y
Sbjct: 458 EGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLE 517
Query: 324 YNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKME 383
YN +I YGKA ++A F M +G P T+N++ + D + E ++ +M
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577
Query: 384 ELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVC 443
+ C P +TY +I + + +S A + M++ ++P+ V Y +L+ ++ MV
Sbjct: 578 DSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVE 637
Query: 444 EAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLA-GDMSSEGYSANI 502
EA + M+ G++ + ++L + Y + G LE++ + + + G ++ +
Sbjct: 638 EAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML 697
Query: 503 DGYGERGHVLEAERAFICCQEGKKLTVLVF------------------------------ 532
+ G V EAE F +E V+ F
Sbjct: 698 SLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLS 757
Query: 533 -----NVMVKAYGMGRNYDKACNLFDSM-TSHGAVPDKCSYNSLIQILAGADLPHMAKRY 586
N ++ Y + C LF M + D ++ +L +L +P A
Sbjct: 758 DCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQ 817
Query: 587 LRKMQEAG----------------------------LVSDCIP-----YCAVISSYMKLG 613
L+ L S IP Y AVI +Y G
Sbjct: 818 LQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASG 877
Query: 614 QLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYN 673
++MA + Y M +EPD+V L+ + G V+ + + L P+ ++
Sbjct: 878 DIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFK 937
Query: 674 SLIKLYT 680
++ Y
Sbjct: 938 AVRDAYV 944
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 131/340 (38%), Gaps = 81/340 (23%)
Query: 216 LWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYK 275
L++ M G+ P YG+LI+ ++ G+ EEA+ + M E G++ + + + +++ Y
Sbjct: 607 LYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYS 666
Query: 276 KAGEFQKAEEFFKKWSSRESLRHGEDTKTMI------GKVENGSHV-------------- 315
K G ++A + K E + +M+ G V +
Sbjct: 667 KVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVIS 726
Query: 316 --------------------------NGSLSSYT-YNTLIDTYGKAGQLKEASETFAQML 348
+G LS T +N ++ Y GQL E E F +ML
Sbjct: 727 FATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEML 786
Query: 349 RE-GIVPTTVTFNTMIHIYGN----NDQLAEVDSLIKKMEELHCPPDTRT---------- 393
E ++ TF T+ + ++ ++++ + + + L P T T
Sbjct: 787 VERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAY 846
Query: 394 -------------------YNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLY 434
YN +I+ ++ + I MA + + +M+E LEPDIV+ L+
Sbjct: 847 ALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVG 906
Query: 435 AYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEA 474
Y MV + + S + G LE + A+ Y+ A
Sbjct: 907 IYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSA 946
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 157/633 (24%), Positives = 264/633 (41%), Gaps = 110/633 (17%)
Query: 263 DEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVNG-SLSS 321
D + I++ M K G A F NG +G SL
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMF-----------------------NGLQEDGFSLDV 208
Query: 322 YTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGN-NDQLAEVDSLIK 380
Y+Y +LI + +G+ +EA F +M +G PT +T+N +++++G ++ SL++
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE 268
Query: 381 KMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRR 440
KM+ PD TYN LI + A++ F +MK A D V+Y LL Y
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328
Query: 441 MVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEG--- 497
EA ++++EM G T ++L Y GML+++ L M+ +G
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEA------MELKNQMAEKGTKP 382
Query: 498 ----YSANIDGYGERGHVLEAERAFICCQE-GKKLTVLVFNVMVKAYGMGRNYDKACNLF 552
Y+ + G+ G V A F + G K + FN +K YG + + +F
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 553 DSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKL 612
D + G PD ++N+L+ + + ++M+ AG V + + +IS+Y +
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502
Query: 613 GQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIY 672
G E A VY+ M+ V PD+ Y ++ A A G +Q++ ME PN + Y
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Query: 673 NSLIKLY-----------------------------------TKVGYLKEAQETYKLLRS 697
SL+ Y +K L EA+ + L+
Sbjct: 563 CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622
Query: 698 LEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG----------------------- 734
SPD+ T N M+ +Y R MV +A + + MK++G
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682
Query: 735 -------------DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLG 781
+ +Y ++ Y RN R +A+RI +MR SG++ D+++YN +G
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIG 742
Query: 782 LYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSL 814
YA D F++ IG + M+ +P+ T+ S+
Sbjct: 743 SYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Score = 179 bits (455), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 145/587 (24%), Positives = 250/587 (42%), Gaps = 72/587 (12%)
Query: 174 WERALEIFEWFKRQECHELNVIHYNIMLRTLGK-ARKWSYVQSLWDEMSVKGIVPINSTY 232
+ A+ +F+ + C +I YN++L GK W+ + SL ++M GI P TY
Sbjct: 224 YREAVNVFKKMEEDGCKP-TLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTY 282
Query: 233 GTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKA--------------- 277
TLI C +G L +EA E M G D+VT ++ +Y K+
Sbjct: 283 NTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVL 342
Query: 278 --------------------GEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVNG 317
G +A E + + + + T++ E V
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVES 402
Query: 318 SLSSY-------------TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIH 364
++S + T+N I YG G+ E + F ++ G+ P VT+NT++
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Query: 365 IYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEP 424
++G N +EV + K+M+ P+ T+N LI +++ A + +M +A + P
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
Query: 425 DIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWF 484
D+ +Y T+L A + M ++E++++EM+ G + +E T +L Y
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG---------- 572
Query: 485 RRFHLAGDMSSEGYSANIDGYGERGHVL-----------EAERAFICCQE-GKKLTVLVF 532
+ L ++ E YS I+ L EAERAF +E G +
Sbjct: 573 KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTL 632
Query: 533 NVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQE 592
N MV YG + KA + D M G P +YNSL+ + + + ++ LR++
Sbjct: 633 NSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILA 692
Query: 593 AGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQ 652
G+ D I Y VI +Y + ++ A ++ +M + PDV+ Y I ++A ++
Sbjct: 693 KGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEE 752
Query: 653 AQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLE 699
A M G PN YNS++ Y K+ EA+ + LR+L+
Sbjct: 753 AIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLD 799
>sp|Q9FLD8|PP408_ARATH Pentatricopeptide repeat-containing protein At5g39980,
chloroplastic OS=Arabidopsis thaliana GN=At5g39980 PE=2
SV=1
Length = 678
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/608 (23%), Positives = 281/608 (46%), Gaps = 66/608 (10%)
Query: 167 ILKEQSSWERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIV 226
+L ++ W+R+L + +W + + +V YN++LR + +A+++ L+DEM + +
Sbjct: 128 LLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALA 187
Query: 227 PINSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEF 286
P TY TLI K G+ + A+ WL++M + + D V ++++ ++ ++ KA
Sbjct: 188 PDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISI 247
Query: 287 FKKWSSRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQ 346
F + L+ T ++ YN++I+ YGKA +EA +
Sbjct: 248 FSR------LKRSGITPDLVA----------------YNSMINVYGKAKLFREARLLIKE 285
Query: 347 MLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDK 406
M G++P TV+++T++ +Y N + E S+ +M+E++C D T NI+I ++ + D
Sbjct: 286 MNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDM 345
Query: 407 ISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSA 466
+ A R FW +++ ++EP++VSY T+L Y + EA L M +E + T +
Sbjct: 346 VKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNT 405
Query: 467 LTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKK 526
+ ++Y + EK+ +L +M S G N
Sbjct: 406 MIKIYGKTMEHEKAT------NLVQEMQSRGIEPN------------------------- 434
Query: 527 LTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRY 586
+ ++ ++ +G D+A LF + S G D+ Y ++I L AKR
Sbjct: 435 --AITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRL 492
Query: 587 LRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFAD 646
L +++ + D IP I+ K G+ E A V++ D+ V+G +IN ++
Sbjct: 493 LHELK----LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSR 548
Query: 647 VGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYT 706
F+ M +AG P++ + ++ Y K ++A Y R ++ V+
Sbjct: 549 NQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVY---REMQEEGCVFP 605
Query: 707 SNC---MIDLYSERSMVRQAEEIFEIMKKKGDAN-EFTYAMMLIMYKRNGRFEEATRIAK 762
M+ LYS + E +F+ ++ + N + + ++ +Y+R + +A+R+
Sbjct: 606 DEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERADKLNDASRVMN 665
Query: 763 QMRESGLI 770
+MRE G++
Sbjct: 666 RMRERGIL 673
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 233/488 (47%), Gaps = 17/488 (3%)
Query: 320 SSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLI 379
S + YN ++ +A Q A F +M + + P T++T+I +G S +
Sbjct: 154 SVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWL 213
Query: 380 KKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIR 439
+KME+ D Y+ LI L + S A F ++K + + PD+V+Y +++ Y
Sbjct: 214 QKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKA 273
Query: 440 RMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWF---RRFHLAGDMSSE 496
++ EA LI EM+ G+ + + S L +Y+E ++ F + + A D+++
Sbjct: 274 KLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT- 332
Query: 497 GYSANIDGYGERGHVLEAERAFICCQEGK-KLTVLVFNVMVKAYGMGRNYDKACNLFDSM 555
+ ID YG+ V EA+R F ++ + V+ +N +++ YG + +A +LF M
Sbjct: 333 -CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 391
Query: 556 TSHGAVPDKCSYNSLIQILAGADLPH-MAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQ 614
+ +YN++I+I G + H A +++MQ G+ + I Y +IS + K G+
Sbjct: 392 QRKDIEQNVVTYNTMIKIY-GKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGK 450
Query: 615 LEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNS 674
L+ A +++ + VE D V+Y +I A+ VG + A+ ++ LP N + +
Sbjct: 451 LDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK---LPDN-IPRET 506
Query: 675 LIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG 734
I + K G +EA ++ D+ CMI+LYS E+FE M+ G
Sbjct: 507 AITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAG 566
Query: 735 ---DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKD 791
D+N AM+L Y + FE+A + ++M+E G + + +L LY+ F+
Sbjct: 567 YFPDSN--VIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEM 624
Query: 792 VIGTFKDM 799
V F+ +
Sbjct: 625 VESLFQRL 632
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 147/296 (49%), Gaps = 1/296 (0%)
Query: 528 TVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYL 587
+V +NV+++ + +D A LFD M PD+ +Y++LI + A +L
Sbjct: 154 SVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWL 213
Query: 588 RKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADV 647
+KM++ + D + Y +I +L A ++ + R + PD+V Y +IN +
Sbjct: 214 QKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKA 273
Query: 648 GNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTS 707
++A+ M AG+ PN V Y++L+ +Y + EA + ++ + + D+ T
Sbjct: 274 KLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTC 333
Query: 708 NCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRE 766
N MID+Y + MV++A+ +F ++K + N +Y +L +Y F EA + + M+
Sbjct: 334 NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 393
Query: 767 SGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCG 822
+ ++++YN ++ +Y + ++M + I+P+ T+ ++ ++ K G
Sbjct: 394 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAG 449
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 186/460 (40%), Gaps = 100/460 (21%)
Query: 415 WKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEA 474
W +EA P + +Y +L + A L EM L D YT S L + +
Sbjct: 144 WVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKE 203
Query: 475 GMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNV 534
GM + + W ++ M + S ++ Y +++E R +C
Sbjct: 204 GMFDSALSWLQK------MEQDRVSGDLVLYS---NLIELSRR-LC-------------- 239
Query: 535 MVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAG 594
+Y KA ++F + G PD +YNS+I + A L A+ +++M EAG
Sbjct: 240 ---------DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAG 290
Query: 595 LVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQ 654
++ + + Y ++S Y++ + A V+ +M N D+ ++I+ + + VK+A
Sbjct: 291 VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEAD 350
Query: 655 SYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLY 714
F ++ + PN V YN+++++Y + EA ++L++ + +V T N MI +Y
Sbjct: 351 RLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIY 410
Query: 715 SERSMVRQAEEIFEIMKKKG------------------------------------DANE 738
+ +A + + M+ +G + ++
Sbjct: 411 GKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQ 470
Query: 739 FTYAMMLIMYKR-------------------------------NGRFEEATRIAKQMRES 767
Y M++ Y+R GR EEAT + +Q ES
Sbjct: 471 VLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFES 530
Query: 768 GLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPD 807
G + D+ + ++ LY+ + R+ +VI F+ M A PD
Sbjct: 531 GEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPD 570
Score = 40.8 bits (94), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 701 SPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGDA-NEFTYAMMLIMYKRNGRFEEATR 759
+P V+ N ++ A +F+ M+++ A + +TY+ ++ + + G F+ A
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 760 IAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLM 819
++M + + DL+ Y+N++ L + I F + + I PD + S+ V
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYG 271
Query: 820 KCGL 823
K L
Sbjct: 272 KAKL 275
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850, chloroplastic
OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 168/642 (26%), Positives = 287/642 (44%), Gaps = 59/642 (9%)
Query: 177 ALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLI 236
ALE FE K + N++ N L +L KA + + ++ + G+VP + TY ++
Sbjct: 452 ALETFEKMKTKGIAP-NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMM 510
Query: 237 DVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESL 296
SK G +EA+ L M E G EPD + + ++ KA +A W +
Sbjct: 511 KCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA------WKMFMRM 564
Query: 297 RHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTT 356
+ + T++ TYNTL+ GK G+++EA E F M+++G P T
Sbjct: 565 KEMKLKPTVV----------------TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT 608
Query: 357 VTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWK 416
+TFNT+ ND++ ++ KM ++ C PD TYN +IF KN ++ A +F +
Sbjct: 609 ITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ 668
Query: 417 MKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGM 476
MK+ + PD V+ TLL ++ +A ++I T
Sbjct: 669 MKKL-VYPDFVTLCTLLPGVVKASLIEDAYKII------------------TNFLYNCAD 709
Query: 477 LEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMV 536
+ W L G + +E N + ER L A C++G + V +
Sbjct: 710 QPANLFWE---DLIGSILAEAGIDNAVSFSER---LVANGI---CRDGDSILVPIIRYSC 760
Query: 537 KAYGMGRNYDKACNLFDSMTSH-GAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGL 595
K N A LF+ T G P +YN LI L AD+ +A+ +++ G
Sbjct: 761 KH----NNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGC 816
Query: 596 VSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQS 655
+ D Y ++ +Y K G+++ E+YK+M E + + + ++I+ GNV A
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Query: 656 -YFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLY 714
Y+D M P A Y LI +K G L EA++ ++ + P+ N +I+ +
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 715 SERSMVRQAEEIFEIMKKKGDANEF-TYAMMLIMYKRNGRFEEATRIAKQMRESGLISDL 773
+ A +F+ M K+G + TY++++ GR +E K+++ESGL D+
Sbjct: 937 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDV 996
Query: 774 LSYNNVLGLYAVDGRFKDVIGTFKDM-VNAAIQPDDFTFKSL 814
+ YN ++ R ++ + F +M + I PD +T+ SL
Sbjct: 997 VCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSL 1038
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 172/668 (25%), Positives = 288/668 (43%), Gaps = 63/668 (9%)
Query: 181 FEWFKRQECHELNVIHY----NIMLRTL---GKARKWSYVQSLWDEMSVKGIVPINSTYG 233
F +FK LN++H N ML L GK + +YV +D M + I +TY
Sbjct: 102 FSYFK-SVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYV---FDLMQKRIIKRDTNTYL 157
Query: 234 TLIDVCS-KGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKW-- 290
T+ S KGGLK+ A L +M E G + + ++ + K+ +A E +++
Sbjct: 158 TIFKSLSVKGGLKQ-APYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMIL 216
Query: 291 -SSRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLR 349
R SL+ TY++L+ GK + +M
Sbjct: 217 EGFRPSLQ-------------------------TYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 350 EGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISM 409
G+ P TF I + G ++ E ++K+M++ C PD TY +LI K+
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 410 ASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTR 469
A F KMK +PD V+Y TLL +S R + ++ SEM+ G D T + L
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 470 MYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGE------RGHVLEAERAFICCQE 523
+AG ++ F M +G N+ Y R H L+ E
Sbjct: 372 ALCKAGNFGEA------FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425
Query: 524 --GKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPH 581
G K T + V + YG + A F+ M + G P+ + N+ + LA A
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485
Query: 582 MAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLI 641
AK+ +++ GLV D + Y ++ Y K+G+++ A ++ +M+ EPDV+V LI
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 642 NAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEAS 701
N V +A F M+ L P V YN+L+ K G ++EA E ++ +
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 702 PDVYTSNCMIDLYSERSMVRQA-EEIFEIMKKKGDANEFTYAMMLIMYKRNGRFEEATRI 760
P+ T N + D + V A + +F++M + FTY ++ +NG+ +EA
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF 665
Query: 761 AKQMRESGLISDLLSYNNVLGLYAVDGRFKD---VIGTFKDMVNAAIQPDDFTFKSL-GA 816
QM++ + D ++ +L +D +I F + N A QP + ++ L G+
Sbjct: 666 FHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNF--LYNCADQPANLFWEDLIGS 722
Query: 817 VLMKCGLE 824
+L + G++
Sbjct: 723 ILAEAGID 730
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 176/716 (24%), Positives = 295/716 (41%), Gaps = 60/716 (8%)
Query: 133 GCIPS------MLQALDTVKDLDEALKPWAENLSNKERS-----IILKEQSSWERALEIF 181
GC P ++ AL T + LD A + + + + + + I L ++ S R L+
Sbjct: 288 GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSV 347
Query: 182 EWF---KRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDV 238
+ F ++ H +V+ + I++ L KA + D M +GI+P TY TLI
Sbjct: 348 KQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICG 407
Query: 239 CSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRH 298
+ ++A+ M G++P T + + Y K+G+ A E F+K ++
Sbjct: 408 LLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK----- 462
Query: 299 GEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVT 358
G N N SL S KAG+ +EA + F + G+VP +VT
Sbjct: 463 --------GIAPNIVACNASLYSL---------AKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 359 FNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMK 418
+N M+ Y ++ E L+ +M E C PD N LI K D++ A + F +MK
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 419 EANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLE 478
E L+P +V+Y TLL + EA EL M G + T + L + +
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 479 KSW-LWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVM-- 535
+ + F+ + Y+ I G + G V EA F + KKL F +
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF---HQMKKLVYPDFVTLCT 682
Query: 536 -----VKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLI-QILAGADLPHMAKRYLRK 589
VKA + Y N + P + LI ILA A + + A + +
Sbjct: 683 LLPGVVKASLIEDAYKIITNFLYNCADQ---PANLFWEDLIGSILAEAGIDN-AVSFSER 738
Query: 590 MQEAGLVSDCIPYCAVISSY-MKLGQLEMAEEVYKDMIR-FNVEPDVVVYGVLINAFADV 647
+ G+ D I Y K + A +++ + V+P + Y +LI +
Sbjct: 739 LVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEA 798
Query: 648 GNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTS 707
++ AQ F ++S G P+ YN L+ Y K G + E E YK + + E + T
Sbjct: 799 DMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITH 858
Query: 708 NCMIDLYSERSMVRQAEEIFEIMKKKGD--ANEFTYAMMLIMYKRNGRFEEATRIAKQMR 765
N +I + V A +++ + D TY ++ ++GR EA ++ + M
Sbjct: 859 NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML 918
Query: 766 ESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKC 821
+ G + YN ++ + G FK MV ++PD T+ +VL+ C
Sbjct: 919 DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY----SVLVDC 970
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 162/657 (24%), Positives = 272/657 (41%), Gaps = 44/657 (6%)
Query: 197 YNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERMN 256
Y+ ++ LGK R V L EM G+ P T+ I V + G EA L+RM+
Sbjct: 226 YSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 285
Query: 257 EGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMI---------- 306
+ G PD VT +++ A + A+E F+K + RH D T I
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG---RHKPDRVTYITLLDRFSDNR 342
Query: 307 ---------GKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTV 357
++E HV + T+ L+D KAG EA +T M +GI+P
Sbjct: 343 DLDSVKQFWSEMEKDGHVPDVV---TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH 399
Query: 358 TFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKM 417
T+NT+I +L + L ME L P TY + I + K+ A F KM
Sbjct: 400 TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 459
Query: 418 KEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGML 477
K + P+IV+ LY+ + EA+++ + GL D T + + + Y + G +
Sbjct: 460 KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEI 519
Query: 478 EKSWLWFRRFHLAGDMSSEGYSAN-------IDGYGERGHVLEAERAFICCQEGK-KLTV 529
+++ L +M G + I+ + V EA + F+ +E K K TV
Sbjct: 520 DEA------IKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 573
Query: 530 LVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRK 589
+ +N ++ G +A LF+ M G P+ ++N+L L D +A + L K
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFK 633
Query: 590 MQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGN 649
M + G V D Y +I +K GQ++ A + M + V PD V L+
Sbjct: 634 MMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASL 692
Query: 650 VKQAQSYF-DAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSN 708
++ A + + + P + + LI + A + L + D +
Sbjct: 693 IEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSIL 752
Query: 709 CMIDLYS-ERSMVRQAEEIFE-IMKKKGDANEF-TYAMMLIMYKRNGRFEEATRIAKQMR 765
I YS + + V A +FE K G + TY +++ E A + Q++
Sbjct: 753 VPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVK 812
Query: 766 ESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCG 822
+G I D+ +YN +L Y G+ ++ +K+M + + T + + L+K G
Sbjct: 813 STGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAG 869
Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 143/582 (24%), Positives = 237/582 (40%), Gaps = 76/582 (13%)
Query: 133 GCIP------SMLQALDTVKDLDEALKPWAENLSNKERSII---------LKEQSSWERA 177
GC P S++ L +DEA K + K + + L + + A
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Query: 178 LEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLID 237
+E+FE ++ C N I +N + L K + + + +M G VP TY T+I
Sbjct: 593 IELFEGMVQKGCPP-NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 238 VCSKGGLKEEAVCWLERMNEGGMEPDEVTM----------GIVVQMYKKAGEF------Q 281
K G +EA+C+ +M + + PD VT+ ++ YK F Q
Sbjct: 652 GLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQ 710
Query: 282 KAEEFFKKWSSRESLRHGEDTKTMIGK--VENG-------------------SHVNGSLS 320
A F++ G D + V NG ++V+G+ +
Sbjct: 711 PANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGART 770
Query: 321 SY--------------TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIY 366
+ TYN LI +A ++ A + F Q+ G +P T+N ++ Y
Sbjct: 771 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830
Query: 367 GNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMA-SRYFWKMKEANLEPD 425
G + ++ E+ L K+M C +T T+NI+I K + A Y+ M + + P
Sbjct: 831 GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Query: 426 IVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFR 485
+Y L+ S + EA++L M G + + L + +AG + + F+
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950
Query: 486 RFHLAG---DMSSEGYSANIDGYGERGHVLEAERAFICCQE-GKKLTVLVFNVMVKAYGM 541
R G D+ + YS +D G V E F +E G V+ +N+++ G
Sbjct: 951 RMVKEGVRPDLKT--YSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008
Query: 542 GRNYDKACNLFDSM-TSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCI 600
++A LF+ M TS G PD +YNSLI L A + A + ++Q AGL +
Sbjct: 1009 SHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVF 1068
Query: 601 PYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLIN 642
+ A+I Y G+ E A VY+ M+ P+ Y L N
Sbjct: 1069 TFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 196 bits (498), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 149/569 (26%), Positives = 257/569 (45%), Gaps = 41/569 (7%)
Query: 174 WERALEIFEWFKRQECHELNVIHYNIMLRTLGK-ARKWSYVQSLWDEMSVKGIVPINSTY 232
+E+A+++FE K ++ YN++L GK R W + + DEM KG+ T
Sbjct: 226 YEKAIDLFERMKEMGPSP-TLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTC 284
Query: 233 GTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSS 292
T++ C++ GL EA + + G EP VT ++Q++ KAG + +A K+
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 293 R----ESLRHGE---------DTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKE 339
+S+ + E +K G +E + ++ TY T+ID YGKAG+ E
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 340 ASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIF 399
A + F M G VP T T+N ++ + G + E+ ++ M+ C P+ T+N ++
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA 464
Query: 400 LHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEI 459
L +R F +MK EPD ++ TL+ AY +A ++ EM G
Sbjct: 465 LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNA 524
Query: 460 DEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEG-------YSANIDGYGERGHVL 512
T +AL G W ++ DM S+G YS + Y + G+ L
Sbjct: 525 CVTTYNALLNALARKGD------WRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYL 578
Query: 513 EAERAFICCQEGKKL-------TVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKC 565
ER +EG+ T+L+ N +A ++A LF HG PD
Sbjct: 579 GIERIENRIKEGQIFPSWMLLRTLLLANFKCRALA---GSERAFTLFK---KHGYKPDMV 632
Query: 566 SYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDM 625
+NS++ I ++ A+ L ++E GL D + Y +++ Y++ G+ AEE+ K +
Sbjct: 633 IFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 692
Query: 626 IRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYL 685
+ ++PD+V Y +I F G +++A M G+ P YN+ + YT +G
Sbjct: 693 EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMF 752
Query: 686 KEAQETYKLLRSLEASPDVYTSNCMIDLY 714
E ++ + + + P+ T ++D Y
Sbjct: 753 AEIEDVIECMAKNDCRPNELTFKMVVDGY 781
Score = 157 bits (396), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 131/584 (22%), Positives = 252/584 (43%), Gaps = 50/584 (8%)
Query: 256 NEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHV 315
N G ++ D + I V++ + ++ A + K +E L
Sbjct: 167 NSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYL------------------- 207
Query: 316 NGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGN-NDQLAE 374
L Y T++ Y + G+ ++A + F +M G PT VT+N ++ ++G +
Sbjct: 208 ---LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRK 264
Query: 375 VDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLY 434
+ ++ +M D T + ++ A+ + A +F ++K EP V+Y LL
Sbjct: 265 ILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQ 324
Query: 435 AYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMS 494
+ + EA ++ EM+ D T + L Y+ AG +++ G M
Sbjct: 325 VFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMP 384
Query: 495 SE-GYSANIDGYGERGHVLEAERAFICCQE-GKKLTVLVFNVMVKAYGMGRNYDKACNLF 552
+ Y+ ID YG+ G EA + F +E G +N ++ G ++ +
Sbjct: 385 NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
Query: 553 DSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKL 612
M S+G P++ ++N+++ + + R R+M+ G D + +IS+Y +
Sbjct: 445 CDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRC 504
Query: 613 GQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIY 672
G A ++Y +M R V Y L+NA A G+ + ++ M+S G P Y
Sbjct: 505 GSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSY 564
Query: 673 NSLIKLYTKVG-YL---------KEAQ--ETYKLLRSLEASPDVYTSNCMIDLYSERSMV 720
+ +++ Y K G YL KE Q ++ LLR+L ++ + R++
Sbjct: 565 SLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTL-----------LLANFKCRALA 613
Query: 721 RQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNV 779
+E F + KK G + + ML ++ RN +++A I + +RE GL DL++YN++
Sbjct: 614 -GSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL 672
Query: 780 LGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCGL 823
+ +Y G K + + ++PD ++ ++ + GL
Sbjct: 673 MDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGL 716
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 150/331 (45%), Gaps = 16/331 (4%)
Query: 527 LTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRY 586
L V + ++ AY Y+KA +LF+ M G P +YN ++ + M + +
Sbjct: 208 LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFG-----KMGRSW 262
Query: 587 ------LRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVL 640
L +M+ GL D V+S+ + G L A+E + ++ EP V Y L
Sbjct: 263 RKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNAL 322
Query: 641 INAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEA 700
+ F G +A S ME P ++V YN L+ Y + G+ KEA +++
Sbjct: 323 LQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV 382
Query: 701 SPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATR 759
P+ T +ID Y + +A ++F MK+ G N TY +L + + R E +
Sbjct: 383 MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIK 442
Query: 760 IAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLM 819
+ M+ +G + ++N +L L G K V F++M + +PD TF +L +
Sbjct: 443 MLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYG 502
Query: 820 KCGLELTRKK----NAQSGLQAWMSTLSSVI 846
+CG E+ K ++G A ++T ++++
Sbjct: 503 RCGSEVDASKMYGEMTRAGFNACVTTYNALL 533
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 151/637 (23%), Positives = 283/637 (44%), Gaps = 60/637 (9%)
Query: 192 LNVIHYNIMLRTLGKARKWSYVQSL-WDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVC 250
++ I + +L+ L ++ S + M+ G +P +Y L+ +EA+
Sbjct: 120 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALE 179
Query: 251 WLERMNE---GGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIG 307
L M + GG PD V+ V+ + K G+ KA + + R L
Sbjct: 180 LLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILP---------- 229
Query: 308 KVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYG 367
TYN++I KA + +A E M++ G++P +T+N+++H Y
Sbjct: 230 ------------DVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 368 NNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIV 427
++ Q E +KKM PD TY++L+ KN + A + F M + L+P+I
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 428 SYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRF 487
+Y TLL Y+ + + E L+ M G+ D Y S L Y + G ++++ L F +
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSK- 396
Query: 488 HLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDK 547
M +G + N YG +L C+ G+ +++
Sbjct: 397 -----MRQQGLNPNAVTYGAVIGIL--------CKSGRVEDAMLY--------------- 428
Query: 548 ACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVIS 607
F+ M G P YNSLI L + A+ + +M + G+ + I + ++I
Sbjct: 429 ----FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 484
Query: 608 SYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPP 667
S+ K G++ +E++++ M+R V+P+V+ Y LIN + G + +A M S GL P
Sbjct: 485 SHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKP 544
Query: 668 NAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIF 727
N V Y++LI Y K+ +++A +K + S SPD+ T N ++ + A+E++
Sbjct: 545 NTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 604
Query: 728 EIMKKKGDANEF-TYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVD 786
+ + G E TY ++L +N ++A ++ + + L + ++N ++
Sbjct: 605 VRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKV 664
Query: 787 GRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCGL 823
GR + F + + P+ +T++ + ++ GL
Sbjct: 665 GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701
Score = 139 bits (351), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 129/542 (23%), Positives = 242/542 (44%), Gaps = 23/542 (4%)
Query: 323 TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAE-VDSLIKK 381
TY LI +AG+L ++++G + F ++ + + ++ +D ++++
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 382 MEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKE---ANLEPDIVSYRTLLYAYSI 438
M EL C P+ +YNIL+ ++ A M + PD+VSY T++ +
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 439 RRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSS-EG 497
+A EM G+ D T +++ +A ++K+ G M
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 498 YSANIDGYGERGHVLEAERAFI--CCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSM 555
Y++ + GY G EA F+ +G + V+ +++++ +A +FDSM
Sbjct: 269 YNSILHGYCSSGQPKEA-IGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 556 TSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQL 615
T G P+ +Y +L+Q A L M G+ D + +I +Y K G++
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387
Query: 616 EMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSL 675
+ A V+ M + + P+ V YG +I G V+ A YF+ M GL P ++YNSL
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Query: 676 IKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG- 734
I + A+E + + N +ID + + V ++E++FE+M + G
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507
Query: 735 DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIG 794
N TY ++ Y G+ +EA ++ M GL + ++Y+ ++ Y R +D +
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567
Query: 795 TFKDMVNAAIQPDDFTFKSLGAVLMKCGLELTRKKNA---------QSGLQAWMSTLSSV 845
FK+M ++ + PD T+ ++++ GL TR+ A +SG Q +ST + +
Sbjct: 568 LFKEMESSGVSPDIITYN----IILQ-GLFQTRRTAAAKELYVRITESGTQIELSTYNII 622
Query: 846 IE 847
+
Sbjct: 623 LH 624
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 129/577 (22%), Positives = 243/577 (42%), Gaps = 24/577 (4%)
Query: 193 NVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWL 252
+V+ YN ++ L KA+ + + M G++P TY +++ G +EA+ +L
Sbjct: 230 DVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFL 289
Query: 253 ERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENG 312
++M G+EPD VT +++ K G +A + F + R K I
Sbjct: 290 KKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR-------GLKPEI------ 336
Query: 313 SHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQL 372
TY TL+ Y G L E M+R GI P F+ +I Y ++
Sbjct: 337 ---------TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387
Query: 373 AEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTL 432
+ + KM + P+ TY +I + K+ ++ A YF +M + L P + Y +L
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Query: 433 LYAYSIRRMVCEAEELISEMDGGGLEIDE-YTQSALTRMYIEAGMLEKSWLWFRRFHLAG 491
++ AEELI EM G+ ++ + S + E ++E L+ +
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507
Query: 492 DMSSEGYSANIDGYGERGHVLEAERAFI-CCQEGKKLTVLVFNVMVKAYGMGRNYDKACN 550
+ Y+ I+GY G + EA + G K + ++ ++ Y + A
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567
Query: 551 LFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYM 610
LF M S G PD +YN ++Q L AK ++ E+G + Y ++
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLC 627
Query: 611 KLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAV 670
K + A ++++++ +++ + + ++I+A VG +A+ F A S GL PN
Sbjct: 628 KNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYW 687
Query: 671 IYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIM 730
Y + + G L+E + + + + D N ++ +R + +A ++
Sbjct: 688 TYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMI 747
Query: 731 KKKGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRES 767
+K + E + A + I G+++E R + +S
Sbjct: 748 DEKHFSLEASTASLFIDLLSGGKYQEYYRFLPEKYKS 784
Score = 122 bits (307), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 111/530 (20%), Positives = 229/530 (43%), Gaps = 55/530 (10%)
Query: 186 RQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLK 245
R + E +V+ Y++++ L K + + ++D M+ +G+ P +TYGTL+ + G
Sbjct: 293 RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 352
Query: 246 EEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTM 305
E L+ M G+ PD I++ Y K G+ +A F K
Sbjct: 353 VEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMR-------------- 398
Query: 306 IGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHI 365
+ G + N + TY +I K+G++++A F QM+ EG+ P + +N++IH
Sbjct: 399 ----QQGLNPN----AVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450
Query: 366 YGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPD 425
++ + LI +M + +T +N +I H K ++ + + F M ++P+
Sbjct: 451 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510
Query: 426 IVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFR 485
+++Y TL+ Y + + EA +L+S M GL+ + T S L Y + +E + + F+
Sbjct: 511 VITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570
Query: 486 RFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNY 545
+M S G S +I + +N++++ R
Sbjct: 571 ------EMESSGVSPDI---------------------------ITYNIILQGLFQTRRT 597
Query: 546 DKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAV 605
A L+ +T G + +YN ++ L L A + + + L + + +
Sbjct: 598 AAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIM 657
Query: 606 ISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGL 665
I + +K+G+ + A++++ + P+ Y ++ G +++ F +ME G
Sbjct: 658 IDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 717
Query: 666 PPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYS 715
++ + N +++ + G + A ++ S + T++ IDL S
Sbjct: 718 TVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLS 767
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 121/311 (38%), Gaps = 45/311 (14%)
Query: 548 ACNLFDSMTSHGA---VPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCA 604
A + ++ M GA PD C+Y LI A + L + + G D I +
Sbjct: 68 AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127
Query: 605 VISSYMKLGQLEMAEE-VYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAM--- 660
++ + A + V + M P+V Y +L+ D ++A M
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187
Query: 661 ESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMV 720
G PP+ V Y ++I + K G +A TY + PDV T N +I + +
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247
Query: 721 RQAEEIFEIMKKKGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVL 780
+A E+ M K +G++ D ++YN++L
Sbjct: 248 DKAMEVLNTMVK----------------------------------NGVMPDCMTYNSIL 273
Query: 781 GLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCGLELTRKKNAQS----GLQ 836
Y G+ K+ IG K M + ++PD T+ L L K G + +K S GL+
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333
Query: 837 AWMSTLSSVIE 847
++T ++++
Sbjct: 334 PEITTYGTLLQ 344
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 151/668 (22%), Positives = 271/668 (40%), Gaps = 98/668 (14%)
Query: 197 YNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERMN 256
Y++++ L K ++ +SL EM G+ N TY LID KG + A + M
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 257 EGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVN 316
G+ + + K G +KA+ F +G +
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALF-----------------------DGMIAS 376
Query: 317 GSL-SSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEV 375
G + + Y +LI+ Y + +++ E +M + IV + T+ T++ ++ L
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 376 DSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYA 435
+++K+M C P+ Y LI +N + A R +MKE + PDI Y +L+
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 436 YSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSS 495
S + + EA + EM GL+ + +T A YIEA + + + G + +
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 496 EGYSAN-IDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDS 554
+ I+ Y ++G V+EA C+ + S
Sbjct: 557 KVLCTGLINEYCKKGKVIEA----------------------------------CSAYRS 582
Query: 555 MTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQ 614
M G + D +Y L+ L D A+ R+M+ G+ D Y +I+ + KLG
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 615 LEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNS 674
++ A ++ +M+ + P+V++Y +L+ F G +++A+ D M GL PNAV Y +
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 675 LIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKK- 733
+I Y K G L EA + ++ PD + ++D + V +A IF KK
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 734 --------------------------------------GDANEFTYAMMLIMYKRNGRFE 755
G N+ TY +M+ + G E
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 756 EATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLG 815
A + QM+ + L+ +++Y ++L Y GR ++ F + + A I+PD + +
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 816 AVLMKCGL 823
+K G+
Sbjct: 883 NAFLKEGM 890
Score = 157 bits (396), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 136/534 (25%), Positives = 239/534 (44%), Gaps = 35/534 (6%)
Query: 193 NVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWL 252
NV+ Y +++T + ++ + EM +GI P Y +LI SK +EA +L
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 253 ERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENG 312
M E G++P+ T G + Y +A EF A+++ K+ RE G + N
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM--REC-----------GVLPNK 557
Query: 313 SHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQL 372
G LI+ Y K G++ EA + M+ +GI+ T+ +++ ND++
Sbjct: 558 VLCTG---------LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 373 AEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTL 432
+ + + ++M PD +Y +LI +K + AS F +M E L P+++ Y L
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 433 LYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGD 492
L + + +A+EL+ EM GL + T + Y ++G L +++ F L G
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 493 M-SSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVK-AYGMGRNYDKA-- 548
+ S Y+ +DG V A F ++G + FN ++ + G+ K
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEV 788
Query: 549 -CNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVIS 607
L D P+ +YN +I L AK +MQ A L+ I Y ++++
Sbjct: 789 LNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848
Query: 608 SYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESA---- 663
Y K+G+ V+ + I +EPD ++Y V+INAF G +A D M +
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
Query: 664 -GLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSE 716
G + +L+ + KVG ++ A++ + + L+ PD S +I+L +E
Sbjct: 909 DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD---SATVIELINE 959
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 11/277 (3%)
Query: 544 NYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYC 603
N D A L +SM G VP K +Y+ LI L AK L +M G+ D Y
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 604 AVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESA 663
+I +K + A+ + +M+ + +Y I + G +++A++ FD M ++
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 664 GLPPNAVIYNSLIKLYTKVGYLKEAQETYKLL-----RSLEASPDVYTSNCMIDLYSERS 718
GL P A Y SLI+ Y + K ++ Y+LL R++ SP YT ++
Sbjct: 377 GLIPQAQAYASLIEGYCRE---KNVRQGYELLVEMKKRNIVISP--YTYGTVVKGMCSSG 431
Query: 719 MVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYN 777
+ A I + M G N Y ++ + +N RF +A R+ K+M+E G+ D+ YN
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 778 NVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSL 814
+++ + R + +MV ++P+ FT+ +
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 114/303 (37%), Gaps = 92/303 (30%)
Query: 604 AVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYF------ 657
++ + ++ +L++ +VYK M+ NV DV Y +LI A GNV+ +
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE 250
Query: 658 ---------------DAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQ------------- 689
++M GL P Y+ LI K+ L++A+
Sbjct: 251 FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL 310
Query: 690 --ETYKLL-------RSLEASPDV-------------YTSNCMIDLYSERSMVRQAEEIF 727
TY LL R+ +A+ + Y +C I + S+ ++ +A+ +F
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALF 370
Query: 728 EIMKKKG---DANEFT---------------YAMMLIMYKRN------------------ 751
+ M G A + Y +++ M KRN
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Query: 752 GRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTF 811
G + A I K+M SG +++ Y ++ + + RF D + K+M I PD F +
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490
Query: 812 KSL 814
SL
Sbjct: 491 NSL 493
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/477 (25%), Positives = 225/477 (47%), Gaps = 16/477 (3%)
Query: 323 TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKM 382
T ++L++ Y ++ EA QM P TVTFNT+IH +++ +E +LI +M
Sbjct: 152 TLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRM 211
Query: 383 EELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMV 442
C PD TY ++ K I +A KM++ +E D+V Y T++ A + V
Sbjct: 212 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV 271
Query: 443 CEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE------ 496
+A L +EMD G+ + T ++L R G W L DM
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR------WSDASRLLSDMIERKINPNV 325
Query: 497 -GYSANIDGYGERGHVLEAERAFI-CCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDS 554
+SA ID + + G ++EAE+ + + + ++ ++ + M D+A ++F+
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 555 MTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQ 614
M S P+ +YN+LI+ A R+M + GLV + + Y +I + G
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 615 LEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNS 674
+MA++++K M+ V PD++ Y +L++ G +++A F+ ++ + + P+ YN
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 675 LIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG 734
+I+ K G +++ + + L P+V MI + + + +A+ +F MK+ G
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 735 D-ANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFK 790
N TY ++ R+G + + K+MR G + D + + V+ + DGR +
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLH-DGRLE 621
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/521 (25%), Positives = 247/521 (47%), Gaps = 24/521 (4%)
Query: 318 SLSSYTY------NTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQ 371
S +SY Y N L+D +L +A + F +M++ +P+ V FN ++ ++
Sbjct: 41 SAASYDYREKLSRNVLLDL-----KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNK 95
Query: 372 LAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRT 431
V SL ++M+ L D +YNILI + ++ +A KM + EPDIV+ +
Sbjct: 96 FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSS 155
Query: 432 LLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGML------EKSWLWFR 485
LL Y + + EA L+ +M + EY + +T + G+ E L R
Sbjct: 156 LLNGYCHGKRISEAVALVDQM-----FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDR 210
Query: 486 RFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGK-KLTVLVFNVMVKAYGMGRN 544
Y ++G +RG + A ++GK + V+++ ++ A +N
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 545 YDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCA 604
+ A NLF M + G P+ +YNSLI+ L A R L M E + + + + A
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 605 VISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAG 664
+I +++K G+L AE++Y +MI+ +++PD+ Y LIN F + +A+ F+ M S
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 665 LPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAE 724
PN V YN+LIK + K ++E E ++ + + T N +I + A+
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 725 EIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLY 783
+IF+ M G + TY+++L + G+ E+A + + +++S + D+ +YN ++
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 784 AVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCGLE 824
G+ +D F + ++P+ + ++ + + GL+
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551
Score = 152 bits (385), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 134/578 (23%), Positives = 253/578 (43%), Gaps = 46/578 (7%)
Query: 193 NVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWL 252
+++ +N +L + K K+ V SL + M I +Y LI+ + A+ L
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 253 ERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENG 312
+M + G EPD VT+ ++ Y HG+ + V+
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYC----------------------HGKRISEAVALVDQM 176
Query: 313 SHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQL 372
+ ++ T+NTLI + EA +M+ G P T+ T+++ +
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 373 AEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTL 432
SL+KKME+ D Y +I ++ A F +M + P++V+Y +L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 433 LYAYSIRRMVC------EAEELISEMDGGGLEIDEYTQSALTRMYIEAG-MLEKSWLWFR 485
+ R +C +A L+S+M + + T SAL +++ G ++E L+
Sbjct: 297 I------RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 486 RFHLAGDMSSEGYSANIDGYGERGHVLEAERAF-ICCQEGKKLTVLVFNVMVKAYGMGRN 544
+ D YS+ I+G+ + EA+ F + + V+ +N ++K + +
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 545 YDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCA 604
++ LF M+ G V + +YN+LIQ L A MA++ +KM G+ D I Y
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 605 VISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAG 664
++ K G+LE A V++ + + +EPD+ Y ++I G V+ F ++ G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 665 LPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAE 724
+ PN +IY ++I + + G +EA ++ ++ P+ T N +I R+ +R +
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI-----RARLRDGD 585
Query: 725 -----EIFEIMKKKGDANEFTYAMMLIMYKRNGRFEEA 757
E+ + M+ G + + M+I +GR E++
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 623
Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 204/478 (42%), Gaps = 27/478 (5%)
Query: 190 HELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAV 249
+E +++ + +L ++ S +L D+M V P T+ TLI EAV
Sbjct: 146 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 250 CWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKV 309
++RM G +PD T G VV K G+ A KK + T+I +
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 310 ENGSHVNGSLSSY-------------TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTT 356
N +VN +L+ + TYN+LI G+ +AS + M+ I P
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 357 VTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWK 416
VTF+ +I + +L E + L +M + PD TY+ LI +D++ A F
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 417 MKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGM 476
M + P++V+Y TL+ + + V E EL EM GL + T + L + +AG
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 477 LEKSWLWFRRFHLAGDMSSEG-------YSANIDGYGERGHVLEAERAFICCQEGK-KLT 528
+ + F++ M S+G YS +DG + G + +A F Q+ K +
Sbjct: 446 CDMAQKIFKK------MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 529 VLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLR 588
+ +N+M++ + +LF S++ G P+ Y ++I L A R
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 589 KMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFAD 646
+M+E G + + Y +I + ++ G + E+ K+M D ++IN D
Sbjct: 560 EMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 617
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 16/168 (9%)
Query: 137 SMLQALDTVKDLDEALKPWAENLSNK------ERSIILKEQSSW---ERALEIFEWFKRQ 187
+++Q L D D A K + + +S+ SI+L + E+AL +FE+ ++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 188 ECHELNVIHYNIMLRTLGKARKWSYVQSLWD---EMSVKGIVPINSTYGTLIDVCSKGGL 244
+ E ++ YNIM+ + KA K V+ WD +S+KG+ P Y T+I + GL
Sbjct: 495 K-MEPDIYTYNIMIEGMCKAGK---VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 550
Query: 245 KEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSS 292
KEEA M E G P+ T +++ + G+ + E K+ S
Sbjct: 551 KEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 176 bits (446), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 163/666 (24%), Positives = 279/666 (41%), Gaps = 106/666 (15%)
Query: 177 ALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEM---------------- 220
A + F+W + + +V Y I+ L AR + S+ EM
Sbjct: 125 AFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWST 184
Query: 221 ---SVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKA 277
V G ++ + LID+ G+ EEA+ +M + P + ++ + K
Sbjct: 185 RNVCVPGFGVFDALFSVLIDL----GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKL 240
Query: 278 GEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQL 337
G+ + FFK MIG + +TYN +ID K G +
Sbjct: 241 GKTDDVKRFFKD---------------MIG-------AGARPTVFTYNIMIDCMCKEGDV 278
Query: 338 KEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNIL 397
+ A F +M G+VP TVT+N+MI +G +L + ++M+++ C PD TYN L
Sbjct: 279 EAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNAL 338
Query: 398 IFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGL 457
I K K+ + ++ +MK L+P++VSY TL+ A+ M+ +A + +M GL
Sbjct: 339 INCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 458 EIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEG-------YSANIDGYGERGH 510
+EYT ++L + G L + F L +M G Y+A IDG +
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDA------FRLGNEMLQVGVEWNVVTYTALIDGLCDAER 452
Query: 511 VLEAERAFICCQEGKKLTVLV------FNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDK 564
+ EAE F GK T V +N ++ + +N D+A L + + G PD
Sbjct: 453 MKEAEELF-----GKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507
Query: 565 CSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKD 624
Y + I L + AK + +M+E G+ ++ + Y ++ +Y K G + +
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567
Query: 625 MIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMES-AGLPPNAVIYNSLIKLYTKVG 683
M ++E VV + VLI+ V +A YF+ + + GL NA I+ +
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA--------- 618
Query: 684 YLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGDANEFT-YA 742
MID + + V A +FE M +KG + T Y
Sbjct: 619 --------------------------MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652
Query: 743 MMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNA 802
++ + G EA + +M E G+ DLL+Y +++ + + + ++M+
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 712
Query: 803 AIQPDD 808
I PD+
Sbjct: 713 GIHPDE 718
Score = 132 bits (333), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 123/534 (23%), Positives = 227/534 (42%), Gaps = 56/534 (10%)
Query: 194 VIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLE 253
V YNIM+ + K + L++EM +G+VP TY ++ID K G ++ VC+ E
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 254 RMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGS 313
M + EPD +T ++ + K G+ EF+++ NG
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG------------------NGL 363
Query: 314 HVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLA 373
N +Y+TL+D + K G +++A + + M R G+VP T+ ++I L+
Sbjct: 364 KPN----VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 419
Query: 374 EVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLL 433
+ L +M ++ + TY LI +++ A F KM A + P++ SY L+
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Query: 434 YAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDM 493
+ + + + A EL++E+ G G++ D +L +++W G
Sbjct: 480 HGFVKAKNMDRALELLNELKGRGIKPDL--------------LLYGTFIW-------GLC 518
Query: 494 SSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFD 553
S E A V+ E + G K L++ ++ AY N + +L D
Sbjct: 519 SLEKIEA--------AKVVMNEMK----ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 566
Query: 554 SMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKM-QEAGLVSDCIPYCAVISSYMKL 612
M ++ LI L L A Y ++ + GL ++ + A+I K
Sbjct: 567 EMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626
Query: 613 GQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIY 672
Q+E A +++ M++ + PD Y L++ GNV +A + D M G+ + + Y
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAY 686
Query: 673 NSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEI 726
SL+ + L++A+ + + PD ++ + E + +A E+
Sbjct: 687 TSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 172/393 (43%), Gaps = 23/393 (5%)
Query: 409 MASRYF-WKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEY----- 462
+A ++F W M + + SY + + RM +A ++ EM + D +
Sbjct: 124 LAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWS 183
Query: 463 ----------TQSALTRMYIEAGMLEKSWLWF---RRFHLAGDMSSEGYSANIDGYGERG 509
AL + I+ GMLE++ F +RF + S + + + + G
Sbjct: 184 TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRS--CNGLLHRFAKLG 241
Query: 510 HVLEAERAFI-CCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYN 568
+ +R F G + TV +N+M+ + + A LF+ M G VPD +YN
Sbjct: 242 KTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYN 301
Query: 569 SLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRF 628
S+I + +M++ D I Y A+I+ + K G+L + E Y++M
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 629 NVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEA 688
++P+VV Y L++AF G ++QA ++ M GL PN Y SLI K+G L +A
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 689 QETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIM 747
+ + +V T +ID + +++AEE+F M G N +Y ++
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481
Query: 748 YKRNGRFEEATRIAKQMRESGLISDLLSYNNVL 780
+ + + A + +++ G+ DLL Y +
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 148/346 (42%), Gaps = 24/346 (6%)
Query: 493 MSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVL------VF-------NVMVKAY 539
M+ G+ +++ Y H+L R + K VL VF NV V +
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 192
Query: 540 GMGRNY----------DKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRK 589
G+ ++A F M P S N L+ A KR+ +
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 590 MQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGN 649
M AG Y +I K G +E A ++++M + PD V Y +I+ F VG
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 650 VKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNC 709
+ +F+ M+ P+ + YN+LI + K G L E Y+ ++ P+V + +
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 710 MIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESG 768
++D + + M++QA + + M++ G NE+TY ++ + G +A R+ +M + G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 769 LISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSL 814
+ ++++Y ++ R K+ F M A + P+ ++ +L
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 110/261 (42%), Gaps = 17/261 (6%)
Query: 580 PHMAKRYLR-KMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVV--- 635
P +A ++ + M G YC V A V K+M+ + DV
Sbjct: 122 PKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVL 181
Query: 636 ------------VYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVG 683
V+ L + D+G +++A F M+ + P N L+ + K+G
Sbjct: 182 WSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLG 241
Query: 684 YLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYA 742
+ + +K + A P V+T N MID + V A +FE MK +G + TY
Sbjct: 242 KTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYN 301
Query: 743 MMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNA 802
M+ + + GR ++ ++M++ D+++YN ++ + G+ + +++M
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 803 AIQPDDFTFKSLGAVLMKCGL 823
++P+ ++ +L K G+
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGM 382
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 90/187 (48%), Gaps = 7/187 (3%)
Query: 667 PNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEI 726
P ++++L + +G L+EA + + ++ P + N ++ +++ +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 727 FEIMKKKGD-ANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAV 785
F+ M G FTY +M+ + G E A + ++M+ GL+ D ++YN+++ +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 786 DGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMK-----CGLELTRKKNAQSGLQAWMS 840
GR D + F++M + +PD T+ +L K GLE R+ +GL+ +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG-NGLKPNVV 368
Query: 841 TLSSVIE 847
+ S++++
Sbjct: 369 SYSTLVD 375
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 157/605 (25%), Positives = 262/605 (43%), Gaps = 50/605 (8%)
Query: 198 NIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERMNE 257
NI+L +L +A ++ +D + KG+ P + T I+ KGG EEAV +M E
Sbjct: 243 NILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 301
Query: 258 GGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSR---------ESLRHGEDTKTMIGK 308
G+ P+ VT V+ G + +A F +K R L G IG
Sbjct: 302 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGD 361
Query: 309 ----VENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIH 364
++ + + YN LID++ +AG L +A E M+ +G+ T+ T+NT+I
Sbjct: 362 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 421
Query: 365 IYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEP 424
Y N Q + L+K+M + + ++ +I L + A R+ +M N+ P
Sbjct: 422 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 481
Query: 425 DIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWF 484
TL+ +A EL + G +D T +AL EAG L++++
Sbjct: 482 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 541
Query: 485 RRFHLAG-DMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGR 543
+ G M Y+ I G CC GKK
Sbjct: 542 KEILGRGCVMDRVSYNTLISG---------------CC--GKK----------------- 567
Query: 544 NYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYC 603
D+A D M G PD +Y+ LI L + A ++ + G++ D Y
Sbjct: 568 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 627
Query: 604 AVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESA 663
+I K + E +E + +M+ NV+P+ VVY LI A+ G + A + M+
Sbjct: 628 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 687
Query: 664 GLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQA 723
G+ PN+ Y SLIK + + ++EA+ ++ +R P+V+ +ID Y + + +
Sbjct: 688 GISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV 747
Query: 724 EEIF-EIMKKKGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGL 782
E + E+ K N+ TY +M+ Y R+G EA+R+ +MRE G++ D ++Y +
Sbjct: 748 ECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 807
Query: 783 YAVDG 787
Y G
Sbjct: 808 YLKQG 812
Score = 159 bits (402), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 145/570 (25%), Positives = 246/570 (43%), Gaps = 17/570 (2%)
Query: 259 GMEPDEVTMGIVVQMYKKAGEFQKAEEFFK---KWSSRESLRHGEDTKTMI--GKVENGS 313
GM P + T I++ +A EFQK E F K S + GKVE
Sbjct: 234 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAV 293
Query: 314 HVNGSL-------SSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIY 366
+ + + T+NT+ID G G+ EA +M+ G+ PT +T++ ++
Sbjct: 294 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 353
Query: 367 GNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDI 426
++ + ++K+M + PP+ YN LI + ++ A M L
Sbjct: 354 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 413
Query: 427 VSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRR 486
+Y TL+ Y AE L+ EM G +++ + +++ + M + S L F
Sbjct: 414 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD-SALRFVG 472
Query: 487 FHLAGDMSSEG--YSANIDGYGERG-HVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGR 543
L +MS G + I G + G H E F +G + N ++
Sbjct: 473 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 532
Query: 544 NYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYC 603
D+A + + G V D+ SYN+LI G A +L +M + GL D Y
Sbjct: 533 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 592
Query: 604 AVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESA 663
+I + ++E A + + D R + PDV Y V+I+ ++ Q +FD M S
Sbjct: 593 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 652
Query: 664 GLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQA 723
+ PN V+YN LI+ Y + G L A E + ++ SP+ T +I S S V +A
Sbjct: 653 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 712
Query: 724 EEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGL 782
+ +FE M+ +G + N F Y ++ Y + G+ + + ++M + + ++Y ++G
Sbjct: 713 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 772
Query: 783 YAVDGRFKDVIGTFKDMVNAAIQPDDFTFK 812
YA DG + +M I PD T+K
Sbjct: 773 YARDGNVTEASRLLNEMREKGIVPDSITYK 802
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 129/516 (25%), Positives = 213/516 (41%), Gaps = 56/516 (10%)
Query: 191 ELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVC 250
E +I Y+I+++ L +A++ + EM+ KG P Y LID + G +A+
Sbjct: 340 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 399
Query: 251 WLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRE-SLRHGEDTKTM---- 305
+ M G+ T +++ Y K G+ AE K+ S ++ G T +
Sbjct: 400 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLC 459
Query: 306 -----------IGK--VENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGI 352
+G+ + N S G L+ TLI K G+ +A E + Q L +G
Sbjct: 460 SHLMFDSALRFVGEMLLRNMSPGGGLLT-----TLISGLCKHGKHSKALELWFQFLNKGF 514
Query: 353 VPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASR 412
V T T N ++H +L E + K++ C D +YN LI K+ A
Sbjct: 515 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 574
Query: 413 YFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYI 472
+ +M + L+PD +Y L+ V EA + + G+ D YT S +
Sbjct: 575 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 634
Query: 473 EAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVF 532
+A E+ +F +M S+ N +V+
Sbjct: 635 KAERTEEGQEFF------DEMMSKNVQPN---------------------------TVVY 661
Query: 533 NVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQE 592
N +++AY A L + M G P+ +Y SLI+ ++ AK +M+
Sbjct: 662 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 721
Query: 593 AGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQ 652
GL + Y A+I Y KLGQ+ E + ++M NV P+ + Y V+I +A GNV +
Sbjct: 722 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 781
Query: 653 AQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEA 688
A + M G+ P+++ Y I Y K G + EA
Sbjct: 782 ASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 817
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 121/514 (23%), Positives = 220/514 (42%), Gaps = 36/514 (7%)
Query: 320 SSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLI 379
S T N L+ + +A + ++ E F ++ +G+ P F T I+ + ++ E L
Sbjct: 238 SKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLF 296
Query: 380 KKMEELHCPPDTRTYNILIFLHAKNDKISMASRY---FW---KMKEANLEPDIVSYRTLL 433
KMEE P+ T+N +I D + M RY F KM E +EP +++Y L+
Sbjct: 297 SKMEEAGVAPNVVTFNTVI------DGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 350
Query: 434 YAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDM 493
+ + + +A ++ EM G + + L +IEAG L K+ + + ++ +
Sbjct: 351 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA-IEIKDLMVSKGL 409
Query: 494 S--SEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNV----------MVKAYGM 541
S S Y+ I GY + G AER K++ + FNV ++ ++ M
Sbjct: 410 SLTSSTYNTLIKGYCKNGQADNAERLL------KEMLSIGFNVNQGSFTSVICLLCSHLM 463
Query: 542 GRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIP 601
+D A M P +LI L A + G V D
Sbjct: 464 ---FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 520
Query: 602 YCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAME 661
A++ + G+L+ A + K+++ D V Y LI+ + +A + D M
Sbjct: 521 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 580
Query: 662 SAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVR 721
GL P+ Y+ LI + ++EA + + + PDVYT + MID +
Sbjct: 581 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 640
Query: 722 QAEEIF-EIMKKKGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVL 780
+ +E F E+M K N Y ++ Y R+GR A + + M+ G+ + +Y +++
Sbjct: 641 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 700
Query: 781 GLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSL 814
++ R ++ F++M ++P+ F + +L
Sbjct: 701 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 734
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 125/282 (44%), Gaps = 14/282 (4%)
Query: 548 ACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEA------GLVSDCIP 601
A ++F + + G P K + N L+ L A+ +K EA G+ D
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRAN-------EFQKCCEAFDVVCKGVSPDVYL 275
Query: 602 YCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAME 661
+ I+++ K G++E A +++ M V P+VV + +I+ G +A + + M
Sbjct: 276 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 335
Query: 662 SAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVR 721
G+ P + Y+ L+K T+ + +A K + P+V N +ID + E +
Sbjct: 336 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 395
Query: 722 QAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVL 780
+A EI ++M KG TY ++ Y +NG+ + A R+ K+M G + S+ +V+
Sbjct: 396 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 455
Query: 781 GLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCG 822
L F + +M+ + P +L + L K G
Sbjct: 456 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 497
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 164/686 (23%), Positives = 284/686 (41%), Gaps = 98/686 (14%)
Query: 168 LKEQSSWERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVP 227
L E RA E+ + C ++N++ YN+++ L K +K + +++ K + P
Sbjct: 237 LCELKDLSRAKEMIAHMEATGC-DVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKP 295
Query: 228 INSTYGTLIDVCSKGGLKEEAVCWLERMNEG---GMEPDEVTMGIVVQMYKKAGEFQKAE 284
TY TL+ K +E LE M+E P E + +V+ +K G+ ++A
Sbjct: 296 DVVTYCTLVYGLCK---VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 285 EFFKKWSSRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETF 344
K+ V+ G N + YN LID+ K + EA F
Sbjct: 353 NLVKRV------------------VDFGVSPN----LFVYNALIDSLCKGRKFHEAELLF 390
Query: 345 AQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKN 404
+M + G+ P VT++ +I ++ +L S + +M + YN LI H K
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 405 DKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQ 464
IS A + +M LEP +V+Y +L+ Y + + +A L EM G G+ YT
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 465 SALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEG 524
+ L AG++ + F +E N+
Sbjct: 511 TTLLSGLFRAGLIRDAVKLF----------NEMAEWNV---------------------- 538
Query: 525 KKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAK 584
K + +NVM++ Y + KA MT G VPD SY LI L AK
Sbjct: 539 -KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 585 RYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVL---- 640
++ + + + I Y ++ + + G+LE A V ++M++ V+ D+V YGVL
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 641 -------------------------------INAFADVGNVKQAQSYFDAMESAGLPPNA 669
I+A + G+ K+A +D M + G PN
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 670 VIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSM-VRQAEEIFE 728
V Y ++I K G++ EA+ ++ + + P+ T C +D+ ++ + +++A E+
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHN 777
Query: 729 IMKKKGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGR 788
+ K AN TY M++ + R GR EEA+ + +M G+ D ++Y ++
Sbjct: 778 AILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 789 FKDVIGTFKDMVNAAIQPDDFTFKSL 814
K I + M I+PD + +L
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTL 863
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/541 (23%), Positives = 231/541 (42%), Gaps = 71/541 (13%)
Query: 193 NVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWL 252
N+ YN ++ +L K RK+ + L+D M G+ P + TY LID+ + G + A+ +L
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 253 ERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENG 312
M + G++ ++ + K G+ AE F + MI K
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAE---------------MINKKLEP 470
Query: 313 SHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQL 372
+ V TY +L+ Y G++ +A + +M +GI P+ TF T++ +
Sbjct: 471 TVV-------TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523
Query: 373 AEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTL 432
+ L +M E + P+ TYN++I + + +S A + +M E + PD SYR L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 433 LYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGD 492
++ + EA+ + + G E++E + L + G LE++ + +
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA------LSVCQE 637
Query: 493 MSSEGYSANIDGYGE--RGHVLEAERA--FICCQE----GKKLTVLVFNVMVKAYGMGRN 544
M G ++ YG G + +R F +E G K +++ M+ A +
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697
Query: 545 YDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEA----------- 593
+ +A ++D M + G VP++ +Y ++I L A + A+ KMQ
Sbjct: 698 FKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGC 757
Query: 594 ------------------------GLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFN 629
GL+++ Y +I + + G++E A E+ MI
Sbjct: 758 FLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDG 817
Query: 630 VEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQ 689
V PD + Y +IN +VK+A +++M G+ P+ V YN+LI G + +A
Sbjct: 818 VSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKAT 877
Query: 690 E 690
E
Sbjct: 878 E 878
Score = 139 bits (350), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 124/537 (23%), Positives = 213/537 (39%), Gaps = 87/537 (16%)
Query: 323 TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKM 382
T + L+ K A E F M+ GI P + +I L+ +I M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 383 EELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMV 442
E C + YN+LI K K+ A + +L+PD+V+Y TL+Y +
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYG------L 307
Query: 443 CEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANI 502
C+ +E E G+ + RF S S+ +
Sbjct: 308 CKVQEF------------------------EIGLEMMDEMLCLRF----SPSEAAVSSLV 339
Query: 503 DGYGERGHVLEA----ERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSH 558
+G +RG + EA +R G + V+N ++ + GR + +A LFD M
Sbjct: 340 EGLRKRGKIEEALNLVKRVV---DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Query: 559 GAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMA 618
G P+ +Y+ LI + A +L +M + GL PY ++I+ + K G + A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 619 EEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKL 678
E +MI +EP VV Y L+ + G + +A + M G+ P+ + +L+
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 679 YTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG---- 734
+ G +++A + + + P+ T N MI+ Y E + +A E + M +KG
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 735 --------------------------------DANEFTYAMMLIMYKRNGRFEEATRIAK 762
+ NE Y +L + R G+ EEA + +
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Query: 763 QMRESGLISDLLSYNNVLGLYAVDGRFKD-----VIGTFKDMVNAAIQPDDFTFKSL 814
+M + G+ DL+ Y + +DG K G K+M + ++PDD + S+
Sbjct: 637 EMVQRGVDLDLVCYGVL-----IDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSM 688
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 119/280 (42%), Gaps = 26/280 (9%)
Query: 191 ELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSK-GGLKEEAV 249
+L+++ Y +++ K + L EM +G+ P + Y ++ID SK G KE
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703
Query: 250 CWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKV 309
W +NEG + P+EVT V+ KAG +AE K S+ +
Sbjct: 704 IWDLMINEGCV-PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPN----------- 751
Query: 310 ENGSHVNGSLSSYTYNTLIDTYGKAG-QLKEASETFAQMLREGIVPTTVTFNTMIHIYGN 368
TY +D K +++A E +L+ G++ T T+N +I +
Sbjct: 752 -----------QVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCR 799
Query: 369 NDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVS 428
++ E LI +M PD TY +I + + + A + M E + PD V+
Sbjct: 800 QGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVA 859
Query: 429 YRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALT 468
Y TL++ + + +A EL +EM GL + T T
Sbjct: 860 YNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTT 899
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 174 bits (440), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 219/459 (47%), Gaps = 15/459 (3%)
Query: 323 TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKM 382
T N+L++ + ++ +A QM+ G P + TFNT+IH +++ +E +L+ +M
Sbjct: 153 TLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRM 212
Query: 383 EELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMV 442
C PD TY I++ K I +A KM++ +EP +V Y T++ A + V
Sbjct: 213 VVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNV 272
Query: 443 CEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE------ 496
+A L +EMD G+ + T ++L R G W L DM
Sbjct: 273 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR------WSDASRLLSDMIERKINPNV 326
Query: 497 -GYSANIDGYGERGHVLEAERAFI-CCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDS 554
+SA ID + + G ++EAE+ + + + ++ ++ + M D+A ++F+
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 555 MTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQ 614
M S P+ +YN+LI+ A R+M + GLV + + Y +I + + +
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 615 LEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNS 674
+ A+ V+K M+ V PD++ Y +L++ + G V+ A F+ ++ + + P+ YN
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 675 LIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG 734
+I+ K G +++ + + L P+V T M+ + + + +A+ +F MK++G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 735 D-ANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISD 772
+ TY ++ + R+G + + ++MR + D
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 605
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 239/496 (48%), Gaps = 11/496 (2%)
Query: 336 QLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYN 395
+L +A F M++ P+ V F+ ++ ++ V SL ++M+ L + TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 396 ILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGG 455
ILI + ++S+A KM + EPDIV+ +LL + + +A L+ +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 456 GLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAG---DMSSEGYSANIDGYGERGHVL 512
G + D +T + L ++ R + G D+ + G N G +RG +
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN--GLCKRGDID 238
Query: 513 EAERAFICCQEGK-KLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLI 571
A ++GK + V+++N ++ A +N + A NLF M + G P+ +YNSLI
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 572 QILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVE 631
+ L A R L M E + + + + A+I +++K G+L AE++Y +MI+ +++
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 632 PDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQET 691
PD+ Y LIN F + +A+ F+ M S PN V YN+LIK + K + E E
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 692 YKLL--RSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGDANEF-TYAMMLIMY 748
++ + R L + YT+ +I + + A+ +F+ M G + TY+++L
Sbjct: 419 FREMSQRGLVGNTVTYTT--LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 749 KRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDD 808
NG+ E A + + ++ S + D+ +YN ++ G+ +D F + ++P+
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536
Query: 809 FTFKSLGAVLMKCGLE 824
T+ ++ + + GL+
Sbjct: 537 VTYTTMMSGFCRKGLK 552
Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 205/478 (42%), Gaps = 27/478 (5%)
Query: 190 HELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAV 249
+E +++ N +L + S SL +M G P + T+ TLI + EAV
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 250 CWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKV 309
++RM G +PD VT GIVV K G+ A KK + T+I +
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 310 ENGSHVNGSLSSY-------------TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTT 356
N +VN +L+ + TYN+LI G+ +AS + M+ I P
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 357 VTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWK 416
VTF+ +I + +L E + L +M + PD TY+ LI +D++ A F
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 417 MKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGM 476
M + P++V+Y TL+ + + V E EL EM GL + T + L + +A
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 477 LEKSWLWFRRFHLAGDMSSEG-------YSANIDGYGERGHVLEAERAFICCQEGK-KLT 528
+ + + F++ M S+G YS +DG G V A F Q K +
Sbjct: 447 CDNAQIVFKQ------MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500
Query: 529 VLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLR 588
+ +N+M++ + +LF S++ G P+ +Y +++ L A R
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR 560
Query: 589 KMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFAD 646
+M+E G + D Y +I ++++ G + E+ ++M D G++ N D
Sbjct: 561 EMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHD 618
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 175 ERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGT 234
E AL +FE+ +R + E ++ YNIM+ + KA K L+ +S+KG+ P TY T
Sbjct: 483 ETALVVFEYLQRSK-MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 235 LIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRE 294
++ + GLKEEA M E G PD T +++ + + G+ + E ++
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM---R 598
Query: 295 SLRHGEDTKTMIGKVENGSH 314
S R D T IG V N H
Sbjct: 599 SCRFVGDAST-IGLVTNMLH 617
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 174 bits (440), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 218/479 (45%), Gaps = 16/479 (3%)
Query: 320 SSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLI 379
S T N+L++ + ++ EA QM+ G P TVTF T++H +++ +E +L+
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 380 KKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIR 439
++M C PD TY +I K + +A KM++ +E D+V Y T++ +
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 440 RMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYS 499
R V +A L +EMD G+ D +T S+L G W L DM +
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR------WSDASRLLSDMLERKIN 307
Query: 500 AN-------IDGYGERGHVLEAERAFI-CCQEGKKLTVLVFNVMVKAYGMGRNYDKACNL 551
N ID + + G ++EAE+ F Q ++ +N ++ + M D+A +
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 552 FDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMK 611
F M S +PD +YN+LI A R M GLV + + Y +I + +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 612 LGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVI 671
+ A+ V+K M+ V P+++ Y L++ G +++A F+ ++ + + P+
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 672 YNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMK 731
YN + + K G +++ + + L PDV N MI + ++ + +A +F MK
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
Query: 732 KKGD-ANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRF 789
+ G + TY ++ + R+G + + K+MR D +Y V + DGR
Sbjct: 548 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLH-DGRL 605
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 219/492 (44%), Gaps = 42/492 (8%)
Query: 336 QLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYN 395
+L EA + F +M++ P+ V F+ ++ + V S +KME L + TYN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 396 ILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGG 455
I+I + ++S A KM + P IV+ +LL + + EA L+ +M
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 456 GLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAG---DMSSEGYSANIDGYGERGHVL 512
G + D T + L + ++ R + G D+ + Y A I+G +RG
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT--YGAVINGLCKRGEPD 222
Query: 513 EAERAFICCQEGK-KLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLI 571
A ++GK + V++++ ++ + R+ D A NLF M + G PD +Y+
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS--- 279
Query: 572 QILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVE 631
++IS G+ A + DM+ +
Sbjct: 280 --------------------------------SLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 632 PDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQET 691
P+VV + LI+AFA G + +A+ FD M + PN V YNSLI + L EAQ+
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 692 YKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKR 750
+ L+ S + PDV T N +I+ + + V E+F M ++G N TY ++ + +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 751 NGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFT 810
+ A + KQM G+ ++++YN +L +G+ + + F+ + + ++PD +T
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 811 FKSLGAVLMKCG 822
+ + + K G
Sbjct: 488 YNIMSEGMCKAG 499
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 202/465 (43%), Gaps = 36/465 (7%)
Query: 190 HELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAV 249
++ + + + ++ L + K S +L + M VKG P TYG +I+ K G + A+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 250 CWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKV 309
L +M +G +E D V V+ K RH +D + ++
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCK-------------------YRHVDDALNLFTEM 266
Query: 310 ENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNN 369
+N +TY++LI G+ +AS + ML I P VTFN++I +
Sbjct: 267 DNKGI---RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
Query: 370 DQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSY 429
+L E + L +M + P+ TYN LI +D++ A + F M + PD+V+Y
Sbjct: 324 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 430 RTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHL 489
TL+ + + V + EL +M GL + T + L + +A + + + F++
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ--- 440
Query: 490 AGDMSSEGYSANI-------DGYGERGHVLEAERAFICCQEGK-KLTVLVFNVMVKAYGM 541
M S+G NI DG + G + +A F Q+ K + + +N+M +
Sbjct: 441 ---MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 542 GRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIP 601
+ +LF S++ G PD +YN++I L A KM+E G + D
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557
Query: 602 YCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFAD 646
Y +I ++++ G + E+ K+M D YG++ + D
Sbjct: 558 YNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD 602
Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 168 LKEQSSWERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVP 227
L + E+A+ +FE+ ++ + E ++ YNIM + KA K L+ +S+KG+ P
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSK-MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Query: 228 INSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFF 287
Y T+I K GLKEEA +M E G PD T +++ + + G+ + E
Sbjct: 519 DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 578
Query: 288 KKWSS 292
K+ S
Sbjct: 579 KEMRS 583
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 220/516 (42%), Gaps = 61/516 (11%)
Query: 192 LNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCW 251
+NV NIM+ L K K V + ++ KG+ P TY TLI S GL EEA
Sbjct: 233 INVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFEL 292
Query: 252 LERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVEN 311
+ M G P T V+ K G++++A+E F E LR G
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA-----EMLRSGL----------- 336
Query: 312 GSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQ 371
S S TY +L+ K G + E + F+ M +VP V F++M+ ++ +
Sbjct: 337 ------SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390
Query: 372 LAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRT 431
L + ++E PD Y ILI + + IS+A +M + D+V+Y T
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 432 LLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRR----- 486
+L+ R+M+ EA++L +EM L D YT + L + + G L+ + F++
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Query: 487 --------------FHLAGDMSSE-----------------GYSANIDGYGERGHVLEAE 515
F GD+ + YS ++ +GH+ EA
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAF 570
Query: 516 RAFI-CCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQIL 574
R + + K TV++ N M+K Y N + + M S G VPD SYN+LI
Sbjct: 571 RVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGF 630
Query: 575 AGADLPHMAKRYLRKMQE--AGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEP 632
+ A ++KM+E GLV D Y +++ + + Q++ AE V + MI V P
Sbjct: 631 VREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNP 690
Query: 633 DVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPN 668
D Y +IN F N+ +A D M G P+
Sbjct: 691 DRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/564 (23%), Positives = 255/564 (45%), Gaps = 30/564 (5%)
Query: 269 IVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKV-------------ENGSHV 315
++++ Y +A + ++A E F S+ + +IG + + S
Sbjct: 170 LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS 229
Query: 316 NGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEV 375
++ YT N +++ K G++++ +Q+ +G+ P VT+NT+I Y + + E
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 376 DSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYA 435
L+ M P TYN +I K+ K A F +M + L PD +YR+LL
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 436 YSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSS 495
+ V E E++ S+M + D S++ ++ +G L+K+ ++F AG +
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 496 EG-YSANIDGYGERGHV-----LEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKAC 549
Y+ I GY +G + L E Q+G + V+ +N ++ + +A
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEML----QQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 550 NLFDSMTSHGAVPDKCSYNSLIQILAGADLPHM--AKRYLRKMQEAGLVSDCIPYCAVIS 607
LF+ MT PD SY I I L ++ A +KM+E + D + Y ++
Sbjct: 466 KLFNEMTERALFPD--SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 608 SYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPP 667
+ K+G ++ A+E++ DM+ + P + Y +L+NA G++ +A +D M S + P
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Query: 668 NAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMI-DLYSERSMVRQAEEI 726
+I NS+IK Y + G + + + + S PD + N +I E +M + +
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 727 FEIMKKKGD--ANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYA 784
++ +++G + FTY +L + R + +EA + ++M E G+ D +Y ++ +
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703
Query: 785 VDGRFKDVIGTFKDMVNAAIQPDD 808
+ +M+ PDD
Sbjct: 704 SQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 184/395 (46%), Gaps = 15/395 (3%)
Query: 429 YRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFH 488
+ L+ Y R + EA E + + G + +AL + G +E +W ++
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 489 LAGDMSSEGYSANI-------DGYGER-GHVLEAERAFICCQEGKKLTVLVFNVMVKAYG 540
+G + Y+ NI DG E+ G L + ++G ++ +N ++ AY
Sbjct: 228 RSG-VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ-----EKGVYPDIVTYNTLISAYS 281
Query: 541 MGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCI 600
++A L ++M G P +YN++I L AK +M +GL D
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 601 PYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAM 660
Y +++ K G + E+V+ DM +V PD+V + +++ F GN+ +A YF+++
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 661 ESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMV 720
+ AGL P+ VIY LI+ Y + G + A + + DV T N ++ +R M+
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 721 RQAEEIF-EIMKKKGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNV 779
+A+++F E+ ++ + +T +++ + + G + A + ++M+E + D+++YN +
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 780 LGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSL 814
L + G + DMV+ I P ++ L
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 110/236 (46%), Gaps = 18/236 (7%)
Query: 173 SWERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTY 232
+ + A+E+F+ K + L+V+ YN +L GK + +W +M K I+P +Y
Sbjct: 495 NLQNAMELFQKMKEKRIR-LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 233 GTLID-VCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWS 291
L++ +CSKG L E W E +++ ++P + +++ Y ++G E F +K
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKN-IKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 292 SR---------ESLRHG----EDTKTMIGKVENGSHVNGSLSS--YTYNTLIDTYGKAGQ 336
S +L +G E+ G V+ G L +TYN+++ + + Q
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 337 LKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTR 392
+KEA +M+ G+ P T+ MI+ + + D L E + +M + PD +
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 35.4 bits (80), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 24/163 (14%)
Query: 673 NSLIKLYTKVGYLKEAQETYKLLRSLEASP----------DVYTSNC---------MIDL 713
+++I + + G L +AQ LLR + S D SNC +I
Sbjct: 117 SAMIHILVRSGRLSDAQSC--LLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRT 174
Query: 714 YSERSMVRQAEEIFEIMKKKGDANEFTYAMMLI-MYKRNGRFEEATRIAKQMRESGLISD 772
Y + +R+A E F +++ KG LI R G E A + +++ SG+ +
Sbjct: 175 YVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGIN 234
Query: 773 LLSYNNVLGLYAVDGRFKDVIGTFKDMVN-AAIQPDDFTFKSL 814
+ + N ++ DG+ + V GTF V + PD T+ +L
Sbjct: 235 VYTLNIMVNALCKDGKMEKV-GTFLSQVQEKGVYPDIVTYNTL 276
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 227/488 (46%), Gaps = 19/488 (3%)
Query: 323 TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKM 382
T ++L++ Y + ++ +A QM+ G P T TF T+IH +++ +E +L+ +M
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214
Query: 383 EELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMV 442
+ C PD TY ++ K I +A KM++ +E D+V Y T++ + +
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHM 274
Query: 443 CEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE------ 496
+A L +EMD G+ D +T S+L G W L DM
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR------WSDASRLLSDMIERKINPNV 328
Query: 497 -GYSANIDGYGERGHVLEAERAFI-CCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDS 554
+SA ID + + G ++EAE+ + + + ++ ++ + M D+A ++F+
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 555 MTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQ 614
M S P+ +Y++LI+ A R+M + GLV + + Y +I + +
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 615 LEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNS 674
+ A+ V+K M+ V P+++ Y +L++ G + +A F+ ++ + + P+ YN
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 675 LIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG 734
+I+ K G +++ E + L SP+V N MI + + +A+ + + MK+ G
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 735 D-ANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVI 793
N TY ++ R+G E + + K+MR G D + V + DGR
Sbjct: 569 PLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH-DGRLDK-- 625
Query: 794 GTFKDMVN 801
+F DM++
Sbjct: 626 -SFLDMLS 632
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 232/484 (47%), Gaps = 7/484 (1%)
Query: 336 QLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYN 395
++ +A + F M++ P+ V FN ++ ++ V SL ++M+ L D TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 396 ILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGG 455
I I + ++S+A KM + EPDIV+ +LL Y + + +A L+ +M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 456 GLEIDEYTQSALTR-MYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEA 514
G + D +T + L +++ E L + Y ++G +RG + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 515 ERAFICCQEGK-KLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQI 573
++GK + V+++N ++ ++ D A NLF M + G PD +Y+SLI
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 574 LAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPD 633
L A R L M E + + + + A+I +++K G+L AE++Y +MI+ +++PD
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 634 VVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYK 693
+ Y LIN F + +A+ F+ M S PN V Y++LIK + K ++E E ++
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 694 LL--RSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKR 750
+ R L + YT+ +I + + A+ +F+ M G N TY ++L +
Sbjct: 423 EMSQRGLVGNTVTYTT--LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Query: 751 NGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFT 810
NG+ +A + + ++ S + D+ +YN ++ G+ +D F ++ + P+
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540
Query: 811 FKSL 814
+ ++
Sbjct: 541 YNTM 544
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 204/478 (42%), Gaps = 27/478 (5%)
Query: 190 HELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAV 249
+E +++ + +L +++ S +L D+M G P T+ TLI EAV
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 250 CWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKV 309
+++M + G +PD VT G VV K G+ A KK + T+I +
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 310 ENGSHVNGSLS-------------SYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTT 356
H++ +L+ +TY++LI G+ +AS + M+ I P
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 357 VTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWK 416
VTF+ +I + +L E + L +M + PD TY+ LI +D++ A F
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 417 MKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGM 476
M + P++V+Y TL+ + + V E EL EM GL + T + L + +A
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 477 LEKSWLWFRRFHLAGDMSSEGYSANI-------DGYGERGHVLEAERAFICCQEGK-KLT 528
+ + + F++ M S G NI DG + G + +A F Q +
Sbjct: 449 CDNAQMVFKQ------MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 529 VLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLR 588
+ +N+M++ + LF +++ G P+ +YN++I A L+
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 589 KMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFAD 646
KM+E G + + Y +I + ++ G E + E+ K+M D G++ N D
Sbjct: 563 KMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 620
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 115/278 (41%), Gaps = 1/278 (0%)
Query: 546 DKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAV 605
D A +LF M P +N L+ +A + + +MQ G+ D Y
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 606 ISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGL 665
I+ + + QL +A V M++ EPD+V L+N + + A + D M G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 666 PPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEE 725
P+ + +LI EA + PD+ T +++ +R + A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 726 IFEIMKK-KGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYA 784
+ + M+K K +A+ Y ++ + ++A + +M G+ D+ +Y++++
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 785 VDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCG 822
GR+ D DM+ I P+ TF +L +K G
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 342
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 222/453 (49%), Gaps = 3/453 (0%)
Query: 323 TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKM 382
+YN +I + G++KEA M +G P ++++T+++ Y +L +V LI+ M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 383 EELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMV 442
+ P++ Y +I L + K++ A F +M + PD V Y TL+ + R +
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 443 CEAEELISEMDGGGLEIDEYTQSALTRMYIEAG-MLEKSWLWFRRFHLAGDMSSEGYSAN 501
A + EM + D T +A+ + + G M+E L+ F + S ++
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 502 IDGYGERGHVLEAERAF-ICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGA 560
I+GY + GH+ +A R Q G V+ + ++ + D A L M G
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 561 VPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEE 620
P+ +YNS++ L + A + + + + AGL +D + Y ++ +Y K G+++ A+E
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQE 547
Query: 621 VYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYT 680
+ K+M+ ++P +V + VL+N F G ++ + + M + G+ PNA +NSL+K Y
Sbjct: 548 ILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 681 KVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEF 739
LK A YK + S PD T ++ + + +++A +F+ MK KG +
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 740 TYAMMLIMYKRNGRFEEATRIAKQMRESGLISD 772
TY++++ + + +F EA + QMR GL +D
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/517 (23%), Positives = 219/517 (42%), Gaps = 61/517 (11%)
Query: 193 NVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWL 252
NV YNI++ + + + L M +KG P +Y T+++ + G ++ +
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 253 ERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENG 312
E M G++P+ G ++ + + + +AEE F E +R G T++
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS-----EMIRQGILPDTVV------ 353
Query: 313 SHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQL 372
Y TLID + K G ++ AS+ F +M I P +T+ +I + +
Sbjct: 354 -----------YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 373 AEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTL 432
E L +M PD+ T+ LI + K + A R M +A P++V+Y TL
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 433 LYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAG- 491
+ + A EL+ EM GL+ + +T +++ ++G +E++ F AG
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 492 DMSSEGYSANIDGYGERGHVLEAERAFI-CCQEGKKLTVLVFNVMVKAYGMGRNYDKACN 550
+ + Y+ +D Y + G + +A+ +G + T++ FNV++ + + +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 551 LFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYM 610
L + M + G P+ ++NSL+ K+Y CI
Sbjct: 583 LLNWMLAKGIAPNATTFNSLV------------KQY------------CIR--------- 609
Query: 611 KLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAV 670
L+ A +YKDM V PD Y L+ N+K+A F M+ G +
Sbjct: 610 --NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVS 667
Query: 671 IYNSLIKLYTKVGYLKEAQETYKLLR--SLEASPDVY 705
Y+ LIK + K EA+E + +R L A +++
Sbjct: 668 TYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/495 (21%), Positives = 206/495 (41%), Gaps = 43/495 (8%)
Query: 324 YNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNT-MIHIYGNNDQLAEVDSLIKKM 382
+ L+D G L+EA F +ML G+V + + N + + + + A + ++
Sbjct: 182 FQVLVD----FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREF 237
Query: 383 EELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMV 442
E+ + +YNI+I + +I A M+ PD++SY T++ Y +
Sbjct: 238 PEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGEL 297
Query: 443 CEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMS-SEGYSAN 501
+ +LI M GL+ + Y ++ + L ++ F G + + Y+
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357
Query: 502 IDGYGERGHVLEAERAFICCQEGKKLT--VLVFNVMVKAYGMGRNYDKACNLFDSMTSHG 559
IDG+ +RG + A + F + +T VL + ++ + + +A LF M G
Sbjct: 358 IDGFCKRGDIRAASK-FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 560 AVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAE 619
PD ++ LI A A R M +AG + + Y +I K G L+ A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 620 EVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLY 679
E+ +M + ++P++ Y ++N GN+++A E+AGL + V Y +L+ Y
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 680 TKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGDANEF 739
K G + +AQE K + P + T N +++ + M+ E++ M K
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK------ 590
Query: 740 TYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDM 799
G+ + ++N+++ Y + K +KDM
Sbjct: 591 ----------------------------GIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Query: 800 VNAAIQPDDFTFKSL 814
+ + PD T+++L
Sbjct: 623 CSRGVGPDGKTYENL 637
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 129/276 (46%), Gaps = 1/276 (0%)
Query: 548 ACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVIS 607
A +F G + SYN +I + A L M+ G D I Y V++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 608 SYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPP 667
Y + G+L+ ++ + M R ++P+ +YG +I + + +A+ F M G+ P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 668 NAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIF 727
+ V+Y +LI + K G ++ A + + + S + +PDV T +I + + + +A ++F
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 728 EIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVD 786
M KG + + T+ ++ Y + G ++A R+ M ++G ++++Y ++ +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 787 GRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCG 822
G +M +QP+ FT+ S+ L K G
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Score = 96.7 bits (239), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 132/295 (44%), Gaps = 1/295 (0%)
Query: 529 VLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLR 588
V +N+++ +A +L M G PD SY++++ + +
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 589 KMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVG 648
M+ GL + Y ++I ++ +L AEE + +MIR + PD VVY LI+ F G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 649 NVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSN 708
+++ A +F M S + P+ + Y ++I + ++G + EA + + + PD T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 709 CMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRES 767
+I+ Y + ++ A + M + G N TY ++ + G + A + +M +
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 768 GLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCG 822
GL ++ +YN+++ G ++ + + A + D T+ +L K G
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 229/494 (46%), Gaps = 25/494 (5%)
Query: 320 SSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLI 379
S T ++L++ Y ++ +A QM+ G P T+TF T+IH +++ +E +L+
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 380 KKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIR 439
+M + C P+ TY +++ K +A KM+ A +E D+V + T++ +
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKY 273
Query: 440 RMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE--- 496
R V +A L EM+ G+ + T S+L G W L DM +
Sbjct: 274 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR------WSDASQLLSDMIEKKIN 327
Query: 497 ----GYSANIDGYGERGHVLEAERAFI-CCQEGKKLTVLVFNVMVKAYGMGRNYDKACNL 551
++A ID + + G +EAE+ + + + +N +V + M DKA +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 552 FDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMK 611
F+ M S PD +YN+LI+ + R+M GLV D + Y +I
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 612 LGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVI 671
G + A++V+K M+ V PD++ Y +L++ + G +++A FD M+ + + + I
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 672 YNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMK 731
Y ++I+ K G + + + + L P+V T N MI + ++++A + + MK
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 732 KKGD-ANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYA---VDG 787
+ G N TY ++ + R+G + + ++MR + D + +GL A DG
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD----ASTIGLVANMLHDG 623
Query: 788 RFKDVIGTFKDMVN 801
R +F DM++
Sbjct: 624 RLDK---SFLDMLS 634
Score = 155 bits (393), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 221/483 (45%), Gaps = 5/483 (1%)
Query: 336 QLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYN 395
+L +A F M++ +P+ V FN ++ + V SL +KM+ L TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 396 ILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGG 455
ILI + +IS+A KM + EP IV+ +LL Y + + +A L+ +M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 456 GLEIDEYTQSALTR-MYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEA 514
G D T + L +++ E L R + Y ++G +RG +
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT-DL 243
Query: 515 ERAFICCQEGKKL--TVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQ 572
+ E K+ V++FN ++ + R+ D A NLF M + G P+ +Y+SLI
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 573 ILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEP 632
L A + L M E + + + + A+I +++K G+ AE++Y DMI+ +++P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 633 DVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETY 692
D+ Y L+N F + +A+ F+ M S P+ V YN+LIK + K +++ E +
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 693 KLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRN 751
+ + D T +I A+++F+ M G + TY+++L N
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Query: 752 GRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTF 811
G+ E+A + M++S + D+ Y ++ G+ D F + ++P+ T+
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 812 KSL 814
++
Sbjct: 544 NTM 546
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 209/478 (43%), Gaps = 27/478 (5%)
Query: 190 HELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAV 249
+E +++ + +L ++ S +L D+M G P T+ TLI EAV
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 250 CWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKV 309
++RM + G +P+ VT G+VV K G+ A K + + T+I +
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 310 ENGSHVNGSLSSY-------------TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTT 356
HV+ +L+ + TY++LI G+ +AS+ + M+ + I P
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 357 VTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWK 416
VTFN +I + + E + L M + PD TYN L+ +D++ A + F
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 417 MKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGM 476
M + PD+V+Y TL+ + + V + EL EM GL D T + L + G
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 477 LEKSWLWFRRFHLAGDMSSEG-------YSANIDGYGERGHVLEAERAFICCQEGK-KLT 528
+ + F++ M S+G YS +DG G + +A F Q+ + KL
Sbjct: 451 CDNAQKVFKQ------MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504
Query: 529 VLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLR 588
+ ++ M++ D +LF S++ G P+ +YN++I L L A L+
Sbjct: 505 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 564
Query: 589 KMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFAD 646
KM+E G + + Y +I ++++ G + E+ ++M D G++ N D
Sbjct: 565 KMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHD 622
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/521 (21%), Positives = 218/521 (41%), Gaps = 24/521 (4%)
Query: 193 NVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWL 252
+++ +N +L + K +K+ V SL ++M IV TY LI+ + A+ L
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 253 ERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENG 312
+M + G EP VT+ ++ Y HG+ + V+
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYC----------------------HGKRISDAVALVDQM 181
Query: 313 SHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQL 372
+ + T+ TLI + EA +M++ G P VT+ +++
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 373 AEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTL 432
+L+ KME D +N +I K + A F +M+ + P++V+Y +L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 433 LYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAG-MLEKSWLWFRRFHLAG 491
+ +A +L+S+M + + T +AL +++ G +E L+ +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 492 DMSSEGYSANIDGYGERGHVLEAERAF-ICCQEGKKLTVLVFNVMVKAYGMGRNYDKACN 550
D Y++ ++G+ + +A++ F + V+ +N ++K + + +
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 551 LFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYM 610
LF M+ G V D +Y +LIQ L A++ ++M G+ D + Y ++
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 611 KLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAV 670
G+LE A EV+ M + ++ D+ +Y +I G V F ++ G+ PN V
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 671 IYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMI 711
YN++I L+EA K ++ P+ T N +I
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 23/251 (9%)
Query: 175 ERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGT 234
++A ++FE+ ++C +V+ YN +++ K+++ L+ EMS +G+V TY T
Sbjct: 382 DKAKQMFEFMVSKDCFP-DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 235 LIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRE 294
LI G + A ++M G+ PD +T I++ G+ +KA E F E
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 295 SLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVP 354
L Y Y T+I+ KAG++ + + F + +G+ P
Sbjct: 501 I----------------------KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP 538
Query: 355 TTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYF 414
VT+NTMI + L E +L+KKM+E P++ TYN LI H ++ + ++
Sbjct: 539 NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 598
Query: 415 WKMKEANLEPD 425
+M+ D
Sbjct: 599 REMRSCRFVGD 609
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 113/278 (40%), Gaps = 1/278 (0%)
Query: 546 DKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAV 605
D A LF M +P +N L+ +A + KMQ +V Y +
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 606 ISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGL 665
I+ + + Q+ +A + M++ EP +V L+N + + A + D M G
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 666 PPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEE 725
P+ + + +LI EA + P++ T +++ +R A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 726 IFEIMKK-KGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYA 784
+ M+ K +A+ + ++ + ++A + K+M G+ ++++Y++++
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 785 VDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCG 822
GR+ D DM+ I P+ TF +L +K G
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 344
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 140/538 (26%), Positives = 230/538 (42%), Gaps = 38/538 (7%)
Query: 323 TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKM 382
Y+ LI Y + G ++++ E F M G P+ T N ++ + + V S +K+M
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 383 EELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMV 442
+ PD T+NILI + +S KM+++ P IV+Y T+L+ Y +
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 443 CEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE-GYSAN 501
A EL+ M G++ D T + L + + K +L R +E Y+
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304
Query: 502 IDGYGERGHVLEAERAFI-CCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGA 560
I+G+ G VL A + G + FN ++ + N+ +A +F M + G
Sbjct: 305 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364
Query: 561 VPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEE 620
P + SY L+ L +A+ + +M+ G+ I Y +I K G L+ A
Sbjct: 365 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424
Query: 621 VYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYT 680
+ +M + ++PD+V Y LIN F VG K A+ + GL PN +IY++LI
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 681 KVGYLKEAQETYK----------------LLRSL-------EAS------------PDVY 705
++G LKEA Y+ L+ SL EA P+
Sbjct: 485 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 544
Query: 706 TSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQM 764
+ +C+I+ Y +A +F+ M K G FTY +L + G EA + K +
Sbjct: 545 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 604
Query: 765 RESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCG 822
D + YN +L G + F +MV +I PD +T+ SL + L + G
Sbjct: 605 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 662
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 154/676 (22%), Positives = 277/676 (40%), Gaps = 71/676 (10%)
Query: 182 EWFKRQECHELNVIHYNIMLRTL---GKARKWSYVQSLWDEMSVKGIVPINSTYGTLID- 237
E KR+ C + V +NI++ L G K SY L +M G P TY T++
Sbjct: 183 EMLKRKICPD--VATFNILINVLCAEGSFEKSSY---LMQKMEKSGYAPTIVTYNTVLHW 237
Query: 238 VCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLR 297
C KG K A+ L+ M G++ D T +++ ++ K + R
Sbjct: 238 YCKKGRFK-AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKR---- 292
Query: 298 HGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTV 357
MI H N TYNTLI+ + G++ AS+ +ML G+ P V
Sbjct: 293 -------MI-------HPN----EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHV 334
Query: 358 TFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKM 417
TFN +I + + E + ME P +Y +L+ KN + +A ++ +M
Sbjct: 335 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394
Query: 418 KEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGML 477
K + ++Y ++ + EA L++EM G++ D T SAL + + G
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454
Query: 478 EKSWLWFRRFHLAG-----------------------------DMSSEGYSAN------- 501
+ + R + G M EG++ +
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 514
Query: 502 IDGYGERGHVLEAERAFIC-CQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGA 560
+ + G V EAE C +G + F+ ++ YG KA ++FD MT G
Sbjct: 515 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 574
Query: 561 VPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEE 620
P +Y SL++ L A+++L+ + D + Y ++++ K G L A
Sbjct: 575 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 634
Query: 621 VYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAG-LPPNAVIYNSLIKLY 679
++ +M++ ++ PD Y LI+ G A + E+ G + PN V+Y +
Sbjct: 635 LFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 694
Query: 680 TKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIF-EIMKKKGDANE 738
K G K + + +L +PD+ T+N MID YS + + ++ E+ + G N
Sbjct: 695 FKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNL 754
Query: 739 FTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKD 798
TY ++L Y + + + + + +G++ D L+ ++++ + + K
Sbjct: 755 TTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKA 814
Query: 799 MVNAAIQPDDFTFKSL 814
+ ++ D +TF L
Sbjct: 815 FICRGVEVDRYTFNML 830
Score = 132 bits (333), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 140/673 (20%), Positives = 272/673 (40%), Gaps = 54/673 (8%)
Query: 195 IHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLER 254
+ Y ++L L K ++ + + M G+ TY +ID K G +EAV L
Sbjct: 369 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428
Query: 255 MNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMI------GK 308
M++ G++PD VT ++ + K G F+ A+E + +G T+I G
Sbjct: 429 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 488
Query: 309 VENGSHVNGSL-------SSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNT 361
++ + ++ +T+N L+ + KAG++ EA E M +GI+P TV+F+
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 362 MIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEAN 421
+I+ YGN+ + + S+ +M ++ P TY L+ K + A ++ +
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608
Query: 422 LEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGM----- 476
D V Y TLL A + +A L EM + D YT ++L G
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668
Query: 477 -------------------------LEKSWLWFRRFHLAGDMSSEGYS-------ANIDG 504
+ K+ W + M + G++ A IDG
Sbjct: 669 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 728
Query: 505 YGERGHVLEAERAF--ICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVP 562
Y G + + + Q G + +N+++ Y ++ + L+ S+ +G +P
Sbjct: 729 YSRMGKIEKTNDLLPEMGNQNGGP-NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILP 787
Query: 563 DKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVY 622
DK + +SL+ + +++ + + L+ G+ D + +IS G++ A ++
Sbjct: 788 DKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLV 847
Query: 623 KDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKV 682
K M + D +++ ++++ M G+ P + Y LI +V
Sbjct: 848 KVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRV 907
Query: 683 GYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIM-KKKGDANEFTY 741
G +K A + + + + P + M+ ++ +A + M K K ++
Sbjct: 908 GDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASF 967
Query: 742 AMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVN 801
++ + +NG EA + M GL DL+SYN ++ G +++M
Sbjct: 968 TTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKG 1027
Query: 802 AAIQPDDFTFKSL 814
+ T+K+L
Sbjct: 1028 DGFLANATTYKAL 1040
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 133/597 (22%), Positives = 248/597 (41%), Gaps = 29/597 (4%)
Query: 197 YNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERMN 256
Y+I++R + ++ M + G P T ++ K G +L+ M
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 257 EGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVN 316
+ + PD T I++ + G F+K+ + K+E +
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQ-------------------KMEKSGY-- 224
Query: 317 GSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVD 376
+ + TYNT++ Y K G+ K A E M +G+ T+N +IH ++++A+
Sbjct: 225 -APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGY 283
Query: 377 SLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAY 436
L++ M + P+ TYN LI + K+ +AS+ +M L P+ V++ L+ +
Sbjct: 284 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 343
Query: 437 SIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE 496
EA ++ M+ GL E + L + + + ++ R G
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403
Query: 497 -GYSANIDGYGERGHVLEAERAFI-CCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDS 554
Y+ IDG + G + EA ++G ++ ++ ++ + + A +
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463
Query: 555 MTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQ 614
+ G P+ Y++LI A R M G D + +++S K G+
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523
Query: 615 LEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNS 674
+ AEE + M + P+ V + LIN + + G +A S FD M G P Y S
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583
Query: 675 LIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIF-EIMKKK 733
L+K K G+L+EA++ K L ++ A+ D N ++ + + +A +F E++++
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643
Query: 734 GDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFK 790
+ +TY ++ R G+ A AK+ G + N V+ VDG FK
Sbjct: 644 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP----NKVMYTCFVDGMFK 696
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 142/637 (22%), Positives = 255/637 (40%), Gaps = 94/637 (14%)
Query: 175 ERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGT 234
+ A+ I+E E H + +N+++ +L KA K + + M+ GI+P ++
Sbjct: 490 KEAIRIYEAMI-LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548
Query: 235 LIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRE 294
LI+ G +A + M + G P T G +++ K G ++AE+F K +
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA-- 606
Query: 295 SLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVP 354
V ++ + YNTL+ K+G L +A F +M++ I+P
Sbjct: 607 --------------------VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 646
Query: 355 TTVTFN-----------TMIHIYGNNDQLAE-------------VDSLIK---------- 380
+ T+ T+I I + A VD + K
Sbjct: 647 DSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYF 706
Query: 381 --KMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSI 438
+M+ L PD T N +I +++ KI + +M N P++ +Y LL+ YS
Sbjct: 707 REQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK 766
Query: 439 RRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGY 498
R+ V + L + G+ D+ T +L E+ MLE
Sbjct: 767 RKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG------------------ 808
Query: 499 SANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSH 558
L+ +AFIC G ++ FN+++ + A +L MTS
Sbjct: 809 -------------LKILKAFIC--RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853
Query: 559 GAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMA 618
G DK + ++++ +L ++ L +M + G+ + Y +I+ ++G ++ A
Sbjct: 854 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913
Query: 619 EEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKL 678
V ++MI + P V ++ A A G +A M L P + +L+ L
Sbjct: 914 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHL 973
Query: 679 YTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGD-AN 737
K G + EA E ++ + D+ + N +I + + A E++E MK G AN
Sbjct: 974 CCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1033
Query: 738 EFTY-AMMLIMYKRNGRFEEATRIAKQMRESGLISDL 773
TY A++ + R F A I K + G I+ +
Sbjct: 1034 ATTYKALIRGLLARETAFSGADIILKDLLARGFITSM 1070
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 81/153 (52%), Gaps = 11/153 (7%)
Query: 668 NAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIF 727
N +Y+ LI++Y + G ++++ E ++L+ +P VYT N ++ S+V+ E++
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILG-----SVVKSGEDVS 176
Query: 728 ------EIMKKKGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLG 781
E++K+K + T+ +++ + G FE+++ + ++M +SG +++YN VL
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236
Query: 782 LYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSL 814
Y GRFK I M + + D T+ L
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNML 269
Score = 33.9 bits (76), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%)
Query: 735 DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIG 794
++N Y +++ +Y R G +++ I + M G + + N +LG G V
Sbjct: 120 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 795 TFKDMVNAAIQPDDFTFKSLGAVL 818
K+M+ I PD TF L VL
Sbjct: 180 FLKEMLKRKICPDVATFNILINVL 203
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/494 (24%), Positives = 229/494 (46%), Gaps = 25/494 (5%)
Query: 320 SSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLI 379
S T ++L++ Y ++ +A QM+ G P T+TF T+IH +++ +E +L+
Sbjct: 79 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 138
Query: 380 KKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIR 439
+M + C P+ TY +++ K I +A KM+ A +E D+V + T++ +
Sbjct: 139 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 198
Query: 440 RMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE--- 496
R V +A L EM+ G+ + T S+L G W L DM +
Sbjct: 199 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR------WSDASQLLSDMIEKKIN 252
Query: 497 ----GYSANIDGYGERGHVLEAERAFI-CCQEGKKLTVLVFNVMVKAYGMGRNYDKACNL 551
++A ID + + G +EAE+ + + +N ++ + M DKA +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 552 FDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMK 611
F+ M S PD +YN+LI+ + R+M GLV D + Y +I
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 612 LGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVI 671
G + A++V+K M+ V PD++ Y +L++ + G +++A FD M+ + + + I
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 672 YNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMK 731
Y ++I+ K G + + + + L P+V T N MI + ++++A + + MK
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 732 KKGD-ANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYA---VDG 787
+ G + TY ++ + R+G + + ++MR + D + +GL A DG
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD----ASTIGLVANMLHDG 548
Query: 788 RFKDVIGTFKDMVN 801
R +F DM++
Sbjct: 549 RLDK---SFLDMLS 559
Score = 146 bits (368), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 216/472 (45%), Gaps = 5/472 (1%)
Query: 347 MLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDK 406
M++ +P+ FN ++ + V SL +KM+ L + TYNILI + +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 407 ISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSA 466
IS+A KM + EP IV+ +LL Y + + +A L+ +M G D T +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 467 LTR-MYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGK 525
L +++ E L R + Y ++G +RG + + + E
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI-DLAFNLLNKMEAA 179
Query: 526 KL--TVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMA 583
K+ V++FN ++ + R+ D A NLF M + G P+ +Y+SLI L A
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 584 KRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINA 643
+ L M E + + + + A+I +++K G+ AE+++ DMI+ +++PD+ Y LIN
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 644 FADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPD 703
F + +A+ F+ M S P+ YN+LIK + K +++ E ++ + D
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 704 VYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAK 762
T +I A+++F+ M G + TY+++L NG+ E+A +
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 763 QMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSL 814
M++S + D+ Y ++ G+ D F + ++P+ T+ ++
Sbjct: 420 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 471
Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 208/478 (43%), Gaps = 27/478 (5%)
Query: 190 HELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAV 249
+E +++ + +L ++ S +L D+M G P T+ TLI EAV
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 250 CWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKV 309
++RM + G +P+ VT G+VV K G+ A K + + T+I +
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 310 ENGSHVNGSLSSY-------------TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTT 356
HV+ +L+ + TY++LI G+ +AS+ + M+ + I P
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 357 VTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWK 416
VTFN +I + + E + L M + PD TYN LI +D++ A + F
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 417 MKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGM 476
M + PD+ +Y TL+ + + V + EL EM GL D T + L + G
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Query: 477 LEKSWLWFRRFHLAGDMSSEG-------YSANIDGYGERGHVLEAERAFICCQEGK-KLT 528
+ + F++ M S+G YS +DG G + +A F Q+ + KL
Sbjct: 376 CDNAQKVFKQ------MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
Query: 529 VLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLR 588
+ ++ M++ D +LF S++ G P+ +YN++I L L A L+
Sbjct: 430 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 489
Query: 589 KMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFAD 646
KM+E G + D Y +I ++++ G + E+ ++M D G++ N D
Sbjct: 490 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHD 547
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 23/252 (9%)
Query: 174 WERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYG 233
++A ++FE+ ++C ++ YN +++ K+++ L+ EMS +G+V TY
Sbjct: 306 LDKAKQMFEFMVSKDCFP-DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 234 TLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSR 293
TLI G + A ++M G+ PD +T I++ G+ +KA E F
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 294 ESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIV 353
E L Y Y T+I+ KAG++ + + F + +G+
Sbjct: 425 EI----------------------KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462
Query: 354 PTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRY 413
P VT+NTMI + L E +L+KKM+E PD+ TYN LI H ++ + ++
Sbjct: 463 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 522
Query: 414 FWKMKEANLEPD 425
+M+ D
Sbjct: 523 IREMRSCRFVGD 534
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 111/269 (41%), Gaps = 1/269 (0%)
Query: 555 MTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQ 614
M +P +N L+ +A + KMQ G+ + Y +I+ + + Q
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 615 LEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNS 674
+ +A + M++ EP +V L+N + + A + D M G P+ + + +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 675 LIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKK-K 733
LI EA + P++ T +++ +R + A + M+ K
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 734 GDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVI 793
+A+ + ++ + ++A + K+M G+ ++++Y++++ GR+ D
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 794 GTFKDMVNAAIQPDDFTFKSLGAVLMKCG 822
DM+ I P+ TF +L +K G
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEG 269
>sp|Q8RWS8|PP199_ARATH Pentatricopeptide repeat-containing protein At2g41720
OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1
Length = 822
Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 172/779 (22%), Positives = 316/779 (40%), Gaps = 106/779 (13%)
Query: 98 VDVRIGNERRTDVISAVCVNGEVQTKCSTKWARYGGCIPSMLQALDTVKDLDEALKPWAE 157
V V IG R+ D+ + E + W+ + L AL+ +++D L W
Sbjct: 47 VSVNIGGLRKADIPRRYRIRVE-NDRFQKDWSVSE--VVDRLMALNRWEEVDGVLNSWVG 103
Query: 158 NLSNKERSIILKEQS---SWERALEIFEWFKRQECHELNVIHYNIMLR------------ 202
+ K ++++E S E + +F+W K Q+ + YN+M+R
Sbjct: 104 RFARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQAR 163
Query: 203 -----------------------TLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVC 239
G+A +W + +L D+M I P STY LI+ C
Sbjct: 164 GLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINAC 223
Query: 240 SKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHG 299
G EA+ ++M + G+ PD VT IV+ YK ++ KA +F+ L G
Sbjct: 224 GSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFE-------LMKG 276
Query: 300 EDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQML--REGIVPTTV 357
+ + T+N +I K GQ +A + F M R P V
Sbjct: 277 AKVRP---------------DTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 321
Query: 358 TFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKM 417
TF +++H+Y ++ ++ + M P+ +YN L+ +A + A +
Sbjct: 322 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 381
Query: 418 KEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGML 477
K+ + PD+VSY LL +Y R +A+E+ M + + T +AL Y G L
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 441
Query: 478 EKSWLWFRRFH-------------LAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEG 524
++ FR+ L S N+D VL A ++ G
Sbjct: 442 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVD------TVLSAAQS-----RG 490
Query: 525 KKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAK 584
L +N + +Y +KA L+ SM D ++ LI A
Sbjct: 491 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 550
Query: 585 RYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAF 644
YL++M++ + Y +V+ +Y K GQ+ AE ++ M EPDV+ Y +++A+
Sbjct: 551 SYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 610
Query: 645 ADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDV 704
+A F ME+ G+ P+++ ++L++ + K G L+R E
Sbjct: 611 NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIP--- 667
Query: 705 YTSNCMIDLYSERSMVRQAEEIFEIMK---------KKGDANEFTYAMMLIMYKRNGRFE 755
+T +++S + +++ + ++++ G N+ ML ++ ++G+ E
Sbjct: 668 FTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQ-----MLHLFGKSGKVE 722
Query: 756 EATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSL 814
++ ++ SG+ +L +Y +L G ++ I + M A IQP + ++ +
Sbjct: 723 AMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDI 781
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 166 bits (420), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 153/642 (23%), Positives = 281/642 (43%), Gaps = 33/642 (5%)
Query: 197 YNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERMN 256
Y ++ + +L+ +M G P + TLI +K G + A+ L+ M
Sbjct: 171 YTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK 230
Query: 257 EGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKT-MIGKVENGSHV 315
++ D V + + + K G+ A +FF + + L+ E T T MIG + + +
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEA-NGLKPDEVTYTSMIGVLCKANRL 289
Query: 316 NGSL-------------SSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTM 362
+ ++ +Y YNT+I YG AG+ EA + +G +P+ + +N +
Sbjct: 290 DEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCI 349
Query: 363 IHIYGNNDQLAEVDSLIKKMEELH--CPPDTRTYNILIFLHAKNDKISMASRYFWKMKEA 420
+ ++ +VD +K EE+ P+ TYNILI + + K+ A M++A
Sbjct: 350 LTCL---RKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKA 406
Query: 421 NLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKS 480
L P++ + ++ + + EA + EMD DE T +L + G ++ +
Sbjct: 407 GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDA 466
Query: 481 WLWFRRFHLAGDMSSEG--YSANID-----GYGERGHVLEAERAFICCQEGKKLTVLVFN 533
+ + + L D + Y++ I G E GH + + C +L +
Sbjct: 467 YKVYEKM-LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMD 525
Query: 534 VMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEA 593
M KA +K +F+ + + VPD SY+ LI L A + M+E
Sbjct: 526 CMFKA----GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 594 GLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQA 653
G V D Y VI + K G++ A ++ ++M EP VV YG +I+ A + + +A
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 654 QSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDL 713
F+ +S + N VIY+SLI + KVG + EA + L +P++YT N ++D
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 714 YSERSMVRQAEEIFEIMKK-KGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISD 772
+ + +A F+ MK+ K N+ TY +++ + +F +A ++M++ G+
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761
Query: 773 LLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSL 814
+SY ++ A G + F PD + ++
Sbjct: 762 TISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Score = 156 bits (394), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 154/711 (21%), Positives = 287/711 (40%), Gaps = 75/711 (10%)
Query: 144 TVKDLDEALK--PWAENLSNKERSIILKEQSSW-----------ERALEIFEWFKRQ--- 187
TV D+ L+ PW + N ++ K Q + RA+E F W++R+
Sbjct: 35 TVNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTEL 94
Query: 188 -ECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKE 246
C E YN +L + + R + + + EMSV G P +T ++ C K
Sbjct: 95 PHCPE----SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLR 150
Query: 247 EAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMI 306
E ++ M + P ++ + F++ T+I
Sbjct: 151 EGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLI 210
Query: 307 GKVENGSHVNGSLSSY-------------TYNTLIDTYGKAGQLKEASETFAQMLREGIV 353
V+ +LS YN ID++GK G++ A + F ++ G+
Sbjct: 211 RGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLK 270
Query: 354 PTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRY 413
P VT+ +MI + ++L E + + +E+ P T YN +I + K A
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330
Query: 414 FWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIE 473
+ + P +++Y +L V EA ++ EM + T + L M
Sbjct: 331 LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCR 389
Query: 474 AGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFN 533
AG L+ + F L M G N V N
Sbjct: 390 AGKLDTA------FELRDSMQKAGLFPN---------------------------VRTVN 416
Query: 534 VMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEA 593
+MV + D+AC +F+ M PD+ ++ SLI L A + KM ++
Sbjct: 417 IMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDS 476
Query: 594 GLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQA 653
++ I Y ++I ++ G+ E ++YKDMI N PD+ + ++ G ++
Sbjct: 477 DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKG 536
Query: 654 QSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASP---DVYTSNCM 710
++ F+ +++ P+A Y+ LI K G+ A ETY+L S++ D N +
Sbjct: 537 RAMFEEIKARRFVPDARSYSILIHGLIKAGF---ANETYELFYSMKEQGCVLDTRAYNIV 593
Query: 711 IDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGL 769
ID + + V +A ++ E MK KG + TY ++ + R +EA + ++ + +
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 770 ISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMK 820
+++ Y++++ + GR + ++++ + P+ +T+ SL L+K
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 133/619 (21%), Positives = 257/619 (41%), Gaps = 46/619 (7%)
Query: 193 NVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWL 252
+++ YN+ + + GK K + E+ G+ P TY ++I V K +EAV
Sbjct: 237 DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 296
Query: 253 ERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMI------ 306
E + + P ++ Y AG+F +A ++ ++ S+ ++
Sbjct: 297 EHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKM 356
Query: 307 GKVENGSHV------NGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFN 360
GKV+ V + + + TYN LID +AG+L A E M + G+ P T N
Sbjct: 357 GKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVN 416
Query: 361 TMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEA 420
M+ + +L E ++ ++M+ C PD T+ LI K ++ A + + KM ++
Sbjct: 417 IMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDS 476
Query: 421 NLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKS 480
+ + + Y +L+ + + ++ +M D + +AG EK
Sbjct: 477 DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKG 536
Query: 481 WLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYG 540
F R F+ + + ++L+ ++KA
Sbjct: 537 RAMFEEIK--------------------------ARRFV--PDARSYSILIHG-LIKAGF 567
Query: 541 MGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCI 600
Y+ LF SM G V D +YN +I + A + L +M+ G +
Sbjct: 568 ANETYE----LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 601 PYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAM 660
Y +VI K+ +L+ A ++++ +E +VV+Y LI+ F VG + +A + +
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 661 ESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMV 720
GL PN +NSL+ K + EA ++ ++ L+ +P+ T +I+ +
Sbjct: 684 MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743
Query: 721 RQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNV 779
+A ++ M+K+G + +Y M+ + G EA + + + +G + D YN +
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Query: 780 LGLYAVDGRFKDVIGTFKD 798
+ + R D F++
Sbjct: 804 IEGLSNGNRAMDAFSLFEE 822
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/594 (19%), Positives = 250/594 (42%), Gaps = 35/594 (5%)
Query: 167 ILKEQSSWERALEIFEWF---KRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVK 223
+L + + + A+E+FE +R C YN M+ G A K+ SL + K
Sbjct: 282 VLCKANRLDEAVEMFEHLEKNRRVPC----TYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 224 GIVPINSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKA 283
G +P Y ++ K G +EA+ E M + P+ T I++ M +AG+ A
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTA 396
Query: 284 EEFFKKWSSRESLRHGEDTKTMIGKVENGSHVNGSLSSY-------------TYNTLIDT 330
E + M+ ++ ++ + + + T+ +LID
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 331 YGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPD 390
GK G++ +A + + +ML ++ + ++I + N+ + + + K M +C PD
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Query: 391 TRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELIS 450
+ N + K + F ++K PD SY L++ E EL
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 451 EMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGE--- 507
M G +D + + + + G + K++ L +M ++G+ + YG
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY------QLLEEMKTKGFEPTVVTYGSVID 630
Query: 508 -RGHVLEAERAFICCQEGK----KLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVP 562
+ + A++ +E K +L V++++ ++ +G D+A + + + G P
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690
Query: 563 DKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVY 622
+ ++NSL+ L A+ + A + M+E + + Y +I+ K+ + A +
Sbjct: 691 NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 623 KDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKV 682
++M + ++P + Y +I+ A GN+ +A + FD ++ G P++ YN++I+ +
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810
Query: 683 GYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGDA 736
+A ++ R T ++D + + QA + ++++ G A
Sbjct: 811 NRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKA 864
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/556 (19%), Positives = 214/556 (38%), Gaps = 56/556 (10%)
Query: 269 IVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLI 328
V+ + ++ + +A E+F+ + R L H ++ YN+L+
Sbjct: 67 FVIGVLRRLKDVNRAIEYFRWYERRTELPHCPES---------------------YNSLL 105
Query: 329 DTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCP 388
+ + +M G P+ T M+ ++L E +++ M +
Sbjct: 106 LVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFR 165
Query: 389 PDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEEL 448
P Y LI + + M F +M+E EP + + TL+ ++ V A L
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSL 225
Query: 449 ISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGER 508
+ EM L+ D + + + G ++ +W +F
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFF------------------------ 261
Query: 509 GHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYN 568
H +EA G K + + M+ D+A +F+ + + VP +YN
Sbjct: 262 -HEIEAN--------GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYN 312
Query: 569 SLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRF 628
++I A A L + + G + I Y +++ K+G+++ A +V+++M +
Sbjct: 313 TMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK- 371
Query: 629 NVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEA 688
+ P++ Y +LI+ G + A D+M+ AGL PN N ++ K L EA
Sbjct: 372 DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431
Query: 689 QETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFE-IMKKKGDANEFTYAMMLIM 747
++ + +PD T +ID + V A +++E ++ N Y ++
Sbjct: 432 CAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKN 491
Query: 748 YKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPD 807
+ +GR E+ +I K M DL N + G + F+++ PD
Sbjct: 492 FFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPD 551
Query: 808 DFTFKSLGAVLMKCGL 823
++ L L+K G
Sbjct: 552 ARSYSILIHGLIKAGF 567
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 154/575 (26%), Positives = 250/575 (43%), Gaps = 33/575 (5%)
Query: 141 ALDTVKDLDEALKPWAENLSNKERSIILKEQSSWE---RALEIFEWFKRQECHELNVIHY 197
+ D +K + E +K + I+++ + +E L + +W + + + Y
Sbjct: 98 SFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFY 157
Query: 198 NIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERMNE 257
N ML L V+ +MSV GI P ST+ LI + A+ LE M
Sbjct: 158 NRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS 217
Query: 258 GGMEPDEVTMGIVVQMYKKAGEFQKA-------EEFFKKWS--SRESLRHGEDTKTMIGK 308
G+ PDE T V+Q Y + G+ A EF WS S + HG + G+
Sbjct: 218 YGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKE---GR 274
Query: 309 VENGSHVNGSLSS--------YTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFN 360
VE+ + +S+ YT+NTL++ KAG +K A E ML+EG P T+N
Sbjct: 275 VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334
Query: 361 TMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEA 420
++I ++ E ++ +M C P+T TYN LI K +++ A+ +
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394
Query: 421 NLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKS 480
+ PD+ ++ +L+ + R A EL EM G E DE+T + L G L+++
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 481 WLWFRRFHLAGDMSSE-GYSANIDGYGERGHVLEAERAFICCQ-EGKKLTVLVFNVMVKA 538
++ L+G S Y+ IDG+ + EAE F + G + +N ++
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Query: 539 YGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLI-QILAGADLPHMAKRYLRKMQEAGLVS 597
R + A L D M G PDK +YNSL+ G D+ A ++ M G
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD-IVQAMTSNGCEP 573
Query: 598 DCIPYCAVISSYMKLGQLEMAEEVYKD--MIRFNVEPDVVVYGVLINAFADVGNVKQAQS 655
D + Y +IS K G++E+A ++ + M N+ P Y +I +A +
Sbjct: 574 DIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAIN 631
Query: 656 YFDAM-ESAGLPPNAVIYNSLIK-LYTKVGYLKEA 688
F M E PP+AV Y + + L G ++EA
Sbjct: 632 LFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREA 666
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 150/689 (21%), Positives = 279/689 (40%), Gaps = 39/689 (5%)
Query: 154 PWAENLSNKERSII--LKEQSSWERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWS 211
P + LS+ + ++ L+ Q AL +F ++ Y +L LG++ +
Sbjct: 41 PHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFD 100
Query: 212 YVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERM-NEGGMEPDEVTMGIV 270
++ + ++M ST+ LI+ ++ L++E + ++ M +E G++PD +
Sbjct: 101 DMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRM 160
Query: 271 VQMYKKAGEFQKAEEFFKK---WSSRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTL 327
+ + + E K W + + T+N L
Sbjct: 161 LNLLVDGNSLKLVEISHAKMSVWGIKPDVS-------------------------TFNVL 195
Query: 328 IDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHC 387
I +A QL+ A M G+VP TF T++ Y L + ++M E C
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC 255
Query: 388 PPDTRTYNILIFLHAKNDKISMASRYFWKMKEAN-LEPDIVSYRTLLYAYSIRRMVCEAE 446
+ N+++ K ++ A + +M + PD ++ TL+ V A
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315
Query: 447 ELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSAN--IDG 504
E++ M G + D YT +++ + G ++++ + + D S + N I
Sbjct: 316 EIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM-ITRDCSPNTVTYNTLIST 374
Query: 505 YGERGHVLEA-ERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPD 563
+ V EA E A + +G V FN +++ + RN+ A LF+ M S G PD
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 564 KCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYK 623
+ +YN LI L A L++M+ +G I Y +I + K + AEE++
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 624 DMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVG 683
+M V + V Y LI+ V+ A D M G P+ YNSL+ + + G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554
Query: 684 YLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYA 742
+K+A + + + S PD+ T +I + V A ++ ++ KG + Y
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYN 614
Query: 743 MMLIMYKRNGRFEEATRIAKQMRESG-LISDLLSYNNVL-GLYAVDGRFKDVIGTFKDMV 800
++ R + EA + ++M E D +SY V GL G ++ + +++
Sbjct: 615 PVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELL 674
Query: 801 NAAIQPDDFTFKSLGAVLMKCGLELTRKK 829
P+ + L L+ +E T K
Sbjct: 675 EKGFVPEFSSLYMLAEGLLTLSMEETLVK 703
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 234/499 (46%), Gaps = 4/499 (0%)
Query: 320 SSYTYNTLIDTYGKAG-QLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSL 378
+SY Y + G + +L +A F +M++ P+ + F+ ++ ++ V SL
Sbjct: 44 TSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISL 103
Query: 379 IKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSI 438
++M+ L P + TY+ILI + ++ +A KM + EP+IV+ +LL Y
Sbjct: 104 GEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCH 163
Query: 439 RRMVCEAEELISEMDGGGLEIDEYTQSALTR-MYIEAGMLEKSWLWFRRFHLAGDMSSEG 497
+ + EA L+ +M G + + T + L +++ E L R
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223
Query: 498 YSANIDGYGERGHVLEAERAFICCQEGK-KLTVLVFNVMVKAYGMGRNYDKACNLFDSMT 556
Y ++G +RG A ++GK + VL++N ++ ++ D A NLF M
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 557 SHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLE 616
+ G P+ +Y+SLI L A R L M E + D + A+I +++K G+L
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343
Query: 617 MAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLI 676
AE++Y +M++ +++P +V Y LIN F + +A+ F+ M S P+ V YN+LI
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 677 KLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-D 735
K + K ++E E ++ + + T N +I + A+EIF+ M G
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 736 ANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGT 795
N TY +L +NG+ E+A + + ++ S + + +YN ++ G+ +D
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 796 FKDMVNAAIQPDDFTFKSL 814
F ++ ++PD + ++
Sbjct: 524 FCNLSLKGVKPDVVAYNTM 542
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 203/473 (42%), Gaps = 48/473 (10%)
Query: 323 TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKM 382
T ++L++ Y + ++ EA QM G P TVTFNT+IH +++ +E +LI +M
Sbjct: 153 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 212
Query: 383 EELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMV 442
C PD TY +++ K +A KM++ LEP ++ Y T++ + +
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 272
Query: 443 CEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE------ 496
+A L EM+ G+ + T S+L G W L DM
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR------WSDASRLLSDMIERKINPDV 326
Query: 497 -GYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSM 555
+SA ID + + G ++EAE+ L+D M
Sbjct: 327 FTFSALIDAFVKEGKLVEAEK----------------------------------LYDEM 352
Query: 556 TSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQL 615
P +Y+SLI D AK+ M D + Y +I + K ++
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 616 EMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSL 675
E EV+++M + + + V Y +LI G+ AQ F M S G+PPN + YN+L
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 676 IKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG- 734
+ K G L++A ++ L+ + P +YT N MI+ + V ++F + KG
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV 532
Query: 735 DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDG 787
+ Y M+ + R G EEA + K+M+E G + + YN ++ DG
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Score = 153 bits (386), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 141/611 (23%), Positives = 257/611 (42%), Gaps = 62/611 (10%)
Query: 193 NVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWL 252
++I ++ +L + K K+ V SL ++M GI + TY LI+ + A+ L
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 139
Query: 253 ERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENG 312
+M + G EP+ VT+ ++ Y + +A D + G N
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV-------------DQMFVTGYQPN- 185
Query: 313 SHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQL 372
+ T+NTLI + EA +M+ +G P VT+ +++
Sbjct: 186 --------TVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 373 AEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTL 432
+L+ KME+ P YN +I K + A F +M+ + P++V+Y +L
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 433 LYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAG-MLEKSWLWFRRFHLAG 491
+ +A L+S+M + D +T SAL +++ G ++E L+ +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 492 DMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNL 551
D S YS+ I+G+ C M D+A +
Sbjct: 358 DPSIVTYSSLINGF--------------C--------------------MHDRLDEAKQM 383
Query: 552 FDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMK 611
F+ M S PD +YN+LI+ R+M + GLV + + Y +I +
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 612 LGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVI 671
G +MA+E++K+M+ V P+++ Y L++ G +++A F+ ++ + + P
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 672 YNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMK 731
YN +I+ K G +++ + + L PDV N MI + + +A+ +F+ MK
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 732 KKGD-ANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFK 790
+ G N Y ++ R+G E + + K+MR G D + V + DGR
Sbjct: 564 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH-DGRLD 622
Query: 791 DVIGTFKDMVN 801
+F DM++
Sbjct: 623 K---SFLDMLS 630
Score = 149 bits (376), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 222/517 (42%), Gaps = 55/517 (10%)
Query: 190 HELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAV 249
+E N++ + +L +++ S +L D+M V G P T+ TLI EA+
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 250 CWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKV 309
++RM G +PD VT G+VV K G+ A K GK+
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ--------------GKL 252
Query: 310 ENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNN 369
E G + YNT+ID K + +A F +M +GI P VT++++I N
Sbjct: 253 EPGVLI--------YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 370 DQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSY 429
+ ++ L+ M E PD T++ LI K K+ A + + +M + +++P IV+Y
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 430 RTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHL 489
+L+ + + + EA+++ M D T + L + + + +E+ FR
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR---- 420
Query: 490 AGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKAC 549
+MS G N + +N++++ + D A
Sbjct: 421 --EMSQRGLVGN---------------------------TVTYNILIQGLFQAGDCDMAQ 451
Query: 550 NLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSY 609
+F M S G P+ +YN+L+ L A +Q + + Y +I
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Query: 610 MKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNA 669
K G++E +++ ++ V+PDVV Y +I+ F G+ ++A + F M+ G PN+
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 670 VIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYT 706
YN+LI+ + G + + E K +RS + D T
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 118/278 (42%), Gaps = 1/278 (0%)
Query: 546 DKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAV 605
D A LF M P ++ L+ +A + + +MQ G+ + Y +
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 606 ISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGL 665
I+ + + QL +A V M++ EP++V L+N + + +A + D M G
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 666 PPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEE 725
PN V +N+LI EA + + PD+ T +++ +R A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 726 IFEIMKK-KGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYA 784
+ M++ K + Y ++ + ++A + K+M G+ ++++Y++++
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 785 VDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCG 822
GR+ D DM+ I PD FTF +L +K G
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 24/233 (10%)
Query: 167 ILKEQSSWERALEIFEWFKRQECHEL--NVIHYNIMLRTLGKARKWSYVQSLWDEMSVKG 224
++K ++R E E F+ L N + YNI+++ L +A Q ++ EM G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 225 IVPINSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAE 284
+ P TY TL+D K G E+A+ E + MEP T I+++ KAG+ +
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 285 EFFKKWSSRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETF 344
+ F S + G + YNT+I + + G +EA F
Sbjct: 522 DLFCNLSLK-----GVKPDVV-----------------AYNTMISGFCRKGSKEEADALF 559
Query: 345 AQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNIL 397
+M +G +P + +NT+I + LIK+M D T ++
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 238/488 (48%), Gaps = 15/488 (3%)
Query: 321 SYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIK 380
+ T++TLI+ G++ EA E +M+ G PT +T N +++ N ++++ LI
Sbjct: 142 TVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLID 201
Query: 381 KMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRR 440
+M E P+ TY ++ + K+ + ++A KM+E ++ D V Y ++
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 441 MVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFR---RFHLAGDMSSEG 497
+ A L +EM+ G + D + L R + AG + R + + D+ +
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA-- 319
Query: 498 YSANIDGYGERGHVLEAE---RAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDS 554
+SA ID + + G + EAE + I Q G + + ++ + DKA ++ D
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMI--QRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 555 MTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQ 614
M S G P+ ++N LI A+L RKM G+V+D + Y +I + +LG+
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 615 LEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNS 674
LE+A+E++++M+ V PD+V Y +L++ D G ++A F+ +E + + + IYN
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 675 LIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG 734
+I + +A + + L PDV T N MI ++ + +A+ +F M++ G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 735 DA-NEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVI 793
+ N TY +++ + G ++ ++ ++++ G D + V+ + + DGR K
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS-DGRLKK-- 614
Query: 794 GTFKDMVN 801
+F DM++
Sbjct: 615 -SFLDMLS 621
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 213/493 (43%), Gaps = 15/493 (3%)
Query: 339 EASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILI 398
+A + F +M R P + F+ + + Q V L K+ME + T +I+I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 399 FLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLE 458
+ K+S+A K+ + EPD V++ TL+ + V EA EL+ M G +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 459 IDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYG-------ERGHV 511
T +AL G + + L R M G+ N YG + G
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDR------MVETGFQPNEVTYGPVLKVMCKSGQT 228
Query: 512 LEAERAFICCQEGK-KLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSL 570
A +E K KL + +++++ + D A NLF+ M G D Y +L
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 571 IQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNV 630
I+ A + LR M + + D + + A+I ++K G+L AEE++K+MI+ +
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 631 EPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQE 690
PD V Y LI+ F + +A D M S G PN +N LI Y K + + E
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 691 TYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIF-EIMKKKGDANEFTYAMMLIMYK 749
++ + D T N +I + E + A+E+F E++ ++ + +Y ++L
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 750 RNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDF 809
NG E+A I +++ +S + D+ YN ++ + D F + ++PD
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVK 528
Query: 810 TFKSLGAVLMKCG 822
T+ + L K G
Sbjct: 529 TYNIMIGGLCKKG 541
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 212/488 (43%), Gaps = 22/488 (4%)
Query: 190 HELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAV 249
+E + + ++ ++ L + S L D M G P T L++ G +AV
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197
Query: 250 CWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMI-GK 308
++RM E G +P+EVT G V+++ K+G+ A E +K R+ +I G
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Query: 309 VENGSHVNG------------SLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTT 356
++GS N Y TLI + AG+ + ++ M++ I P
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317
Query: 357 VTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWK 416
V F+ +I + +L E + L K+M + PDT TY LI K +++ A+
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 417 MKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGM 476
M P+I ++ L+ Y ++ + EL +M G+ D T + L + + E G
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 477 LEKSWLWFRRF---HLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGK-KLTVLVF 532
LE + F+ + D+ S Y +DG + G +A F ++ K +L + ++
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVS--YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495
Query: 533 NVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQE 592
N+++ D A +LF S+ G PD +YN +I L A RKM+E
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Query: 593 AGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQ 652
G + Y +I +++ G + ++ +++ R D ++++ +D G +K
Sbjct: 556 DGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD-GRLK- 613
Query: 653 AQSYFDAM 660
+S+ D +
Sbjct: 614 -KSFLDML 620
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 125/307 (40%), Gaps = 5/307 (1%)
Query: 546 DKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAV 605
D A +LF MT P ++ L ++A + ++M+ G+ + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 606 ISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGL 665
I+ + +L +A +I+ EPD V + LIN G V +A D M G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 666 PPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEE 725
P + N+L+ G + +A + P+ T ++ + + A E
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 726 IFEIM-KKKGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYA 784
+ M ++K + Y++++ ++G + A + +M G +D++ Y ++ +
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 785 VDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCG----LELTRKKNAQSGLQAWMS 840
GR+ D +DM+ I PD F +L +K G E K+ Q G+
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 841 TLSSVIE 847
T +S+I+
Sbjct: 354 TYTSLID 360
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 154/644 (23%), Positives = 266/644 (41%), Gaps = 33/644 (5%)
Query: 171 QSSWERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINS 230
+ + A+ +FE +C E V YN ++ L + + ++ M +GI P
Sbjct: 89 KGKVQEAVNVFERMDFYDC-EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 231 TYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKW 290
++ + K A+ L M+ G E + V VV + + + E F K
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 291 SSRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLRE 350
+ S V+ LS T+N L+ K G +KE + ++++
Sbjct: 208 LA--------------------SGVSLCLS--TFNKLLRVLCKKGDVKECEKLLDKVIKR 245
Query: 351 GIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMA 410
G++P T+N I +L ++ + E PD TYN LI+ KN K A
Sbjct: 246 GVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA 305
Query: 411 SRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRM 470
Y KM LEPD +Y TL+ Y MV AE ++ + G D++T +L
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 471 YIEAGMLEKSWLWFRRFHLAGDMSSE-GYSANIDGYGERGHVLEAER-AFICCQEGKKLT 528
G ++ F G + Y+ I G +G +LEA + A ++G
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425
Query: 529 VLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLR 588
V FN++V A L M S G PD ++N LI + A L
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 589 KMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVG 648
M + G+ D Y ++++ K + E E YK M+ P++ + +L+ +
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYR 545
Query: 649 NVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTS- 707
+ +A + M++ + P+AV + +LI + K G L A Y L R +E + V +S
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA---YTLFRKMEEAYKVSSST 602
Query: 708 ---NCMIDLYSERSMVRQAEEIF-EIMKKKGDANEFTYAMMLIMYKRNGRFEEATRIAKQ 763
N +I ++E+ V AE++F E++ + + +TY +M+ + + G + +
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLE 662
Query: 764 MRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPD 807
M E+G I L + V+ V+ R + G MV + P+
Sbjct: 663 MMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 154/711 (21%), Positives = 305/711 (42%), Gaps = 59/711 (8%)
Query: 159 LSNKERSIILKEQSSWERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWD 218
L K + ++K Q +ALE+F +++ + + Y ++ LG K+ ++ +
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64
Query: 219 EMSVK-GIVPINSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKA 277
+M G + Y + + G +EAV ERM+ EP + ++ + +
Sbjct: 65 DMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDS 124
Query: 278 GEFQKAEEFFKKWSSRE--------SLRHGEDTKT-----MIGKVENGSHVNGSLSSYTY 324
G F +A + + + R ++R KT + + N S ++ Y
Sbjct: 125 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAY 184
Query: 325 NTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEE 384
T++ + + E E F +ML G+ TFN ++ + + E + L+ K+ +
Sbjct: 185 CTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK 244
Query: 385 LHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCE 444
P+ TYN+ I + ++ A R + E +PD+++Y L+Y E
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304
Query: 445 AEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDG 504
AE + +M GLE D YT + L Y + GM++ + + GD G+ +
Sbjct: 305 AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE------RIVGDAVFNGFVPDQFT 358
Query: 505 YGERGHVLEAERAFI--CCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVP 562
Y R+ I C EG+ ++A LF+ G P
Sbjct: 359 Y----------RSLIDGLCHEGET-------------------NRALALFNEALGKGIKP 389
Query: 563 DKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVY 622
+ YN+LI+ L+ + A + +M E GL+ + + +++ K+G + A+ +
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 623 KDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKV 682
K MI PD+ + +LI+ ++ ++ A D M G+ P+ YNSL+ K
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 683 GYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTY 741
++ ETYK + +P+++T N +++ + +A + E MK K + + T+
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 742 AMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIG--TFKDM 799
++ + +NG + A + ++M E+ +S N++ ++A + + F++M
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII-IHAFTEKLNVTMAEKLFQEM 628
Query: 800 VNAAIQPDDFTFKSLGAVLMKCG-LELTRK---KNAQSGLQAWMSTLSSVI 846
V+ + PD +T++ + K G + L K + ++G ++TL VI
Sbjct: 629 VDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVI 679
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 121/524 (23%), Positives = 207/524 (39%), Gaps = 84/524 (16%)
Query: 197 YNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLID-VCSKGGLKEEAVCWLERM 255
+N +LR L K + L D++ +G++P TY I +C +G L + AV + +
Sbjct: 219 FNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL-DGAVRMVGCL 277
Query: 256 NEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHV 315
E G +PD +T ++ K +FQ+AE + K + T+I G V
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 316 ------------NGSLS-SYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTM 362
NG + +TY +LID G+ A F + L +GI P + +NT+
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 363 IHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANL 422
I N + E L +M E P+ +T+NIL+ K +S A M
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 423 EPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWL 482
PDI ++ L++ YS + + A E++ M G++ D YT ++L + E
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE---- 513
Query: 483 WFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMG 542
V+E + + ++G + FN+++++
Sbjct: 514 ---------------------------DVMETYKTMV--EKGCAPNLFTFNILLESLCRY 544
Query: 543 RNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIP- 601
R D+A L + M + PD ++ +LI A RKM+EA VS P
Sbjct: 545 RKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPT 604
Query: 602 YCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVK---------- 651
Y +I ++ + + MAE+++++M+ + PD Y ++++ F GNV
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM 664
Query: 652 -------------------------QAQSYFDAMESAGLPPNAV 670
+A M GL P AV
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 230/509 (45%), Gaps = 48/509 (9%)
Query: 322 YTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKK 381
YTY+ I+ + + QL A A+M++ G P VT +++++ Y ++ ++++ +L+ +
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 382 MEELHCPPDTRTYNILI---FLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSI 438
M E+ PDT T+ LI FLH +K S A +M + +PD+V+Y T++
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLH---NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 439 R-----------------------------------RMVCEAEELISEMDGGGLEIDEYT 463
R R V A +L +EM+ G+ + T
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 464 QSALTRMYIEAGML-EKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAF-ICC 521
++L G + S L + + ++A ID + + G ++EAE+
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 522 QEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPH 581
Q + +N+++ + M D+A +F M S +P+ +YN+LI
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 582 MAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLI 641
R+M + GLV + + Y +I + + G + A+ V+K M+ V D++ Y +L+
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 642 NAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEAS 701
+ G + A F ++ + + N IYN++I+ K G + EA + L SL
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIK 532
Query: 702 PDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGD-ANEFTYAMMLIMYKRNGRFEEATRI 760
PDV T N MI + ++++A+++F MK+ G N TY ++ R+ + +
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAEL 592
Query: 761 AKQMRESGLISDLLSYNNVLGLYAVDGRF 789
K+MR SG + D + + V + DGR
Sbjct: 593 IKEMRSSGFVGDASTISLVTNMLH-DGRL 620
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 231/492 (46%), Gaps = 26/492 (5%)
Query: 336 QLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYN 395
++ +A + F M++ P+ V FN ++ ++ V SL ++M+ L D TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 396 ILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGG 455
I I + ++S+A KM + EPDIV+ +LL Y + + +A L+ +M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 456 GLEIDEYTQSALTR-MYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHV--- 511
G + D +T + L +++ E L + Y ++G +RG +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 512 ------LEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKC 565
+EA R K V++FN ++ + R+ + A +LF M + G P+
Sbjct: 243 LNLLNKMEAARI--------KANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 566 SYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDM 625
+YNSLI L A R L M E + + + + A+I ++ K G+L AE+++++M
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 626 IRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYL 685
I+ +++PD + Y +LIN F + +A+ F M S PN YN+LI + K +
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 686 KEAQETYKLL--RSLEASPDVYTSNCMIDLYSERSMVRQAEEIF-EIMKKKGDANEFTYA 742
++ E ++ + R L + YT+ +I + + A+ +F +++ + + TY+
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTT--IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYS 472
Query: 743 MMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNA 802
++L G+ + A I K +++S + ++ YN ++ G+ + F +
Sbjct: 473 ILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL--- 529
Query: 803 AIQPDDFTFKSL 814
+I+PD T+ ++
Sbjct: 530 SIKPDVVTYNTM 541
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 205/453 (45%), Gaps = 22/453 (4%)
Query: 190 HELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAV 249
+E +++ + +L +++ S +L D+M G P T+ TLI EAV
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 250 CWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKV 309
+++M + G +PD VT G VV K G+ A K + + T+I +
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 310 ENGSHVNGSLSSYT-------------YNTLIDTYGKAGQLKEASETFAQMLREGIVPTT 356
HV ++ +T YN+LI+ G+ +AS + ML + I P
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 357 VTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWK 416
VTFN +I + +L E + L ++M + PDT TYN+LI ++++ A + F
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 417 MKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGM 476
M + P+I +Y TL+ + + V + EL EM GL + T + + + + +AG
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 477 LEKSWLWFRRF---HLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGK-KLTVLVF 532
+ + + F++ + D+ + YS + G G + A F Q+ + +L + ++
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMT--YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIY 506
Query: 533 NVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQE 592
N M++ +A +LF S++ PD +YN++I L L A RKM+E
Sbjct: 507 NTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 593 AGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDM 625
G + + Y +I + ++ + E+ K+M
Sbjct: 564 DGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/572 (20%), Positives = 238/572 (41%), Gaps = 37/572 (6%)
Query: 193 NVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWL 252
+++ +N +L + K K+ V SL ++M GI TY I+ + A+ L
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 253 ERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENG 312
+M + G EPD VT+ ++ Y H + + V+
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYC----------------------HSKRISDAVALVDQM 179
Query: 313 SHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQL 372
+ ++T+ TLI + EA QM++ G P VT+ T+++ +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 373 AEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTL 432
+L+ KME + +N +I K + +A F +M+ + P++V+Y +L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 433 LYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAG-MLEKSWLWFRRFHLAG 491
+ +A L+S M + + T +AL + + G ++E L +
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 492 DMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKL-TVLVFNVMVKAYGMGRNYDKACN 550
D + Y+ I+G+ + EA++ F L + +N ++ + + +
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 551 LFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYM 610
LF M+ G V + +Y ++IQ A A+ ++M + +D + Y ++
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Query: 611 KLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAV 670
G+L+ A ++K + + +E ++ +Y +I G V +A +D S + P+ V
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVV 536
Query: 671 IYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAE-----E 725
YN++I L+EA + ++ ++ P+ T N +I R+ +R + E
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI-----RANLRDCDRAASAE 591
Query: 726 IFEIMKKKGDANEFTYAMMLIMYKRNGRFEEA 757
+ + M+ G + + ++ +GR +++
Sbjct: 592 LIKEMRSSGFVGDASTISLVTNMLHDGRLDKS 623
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 111/278 (39%), Gaps = 1/278 (0%)
Query: 546 DKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAV 605
D A +LF M P +N L+ +A + + +MQ G+ D Y
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 606 ISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGL 665
I+ + + QL +A V M++ EPD+V L+N + + A + D M G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 666 PPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEE 725
P+ + +LI EA + PD+ T +++ +R + A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 726 IFEIMKK-KGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYA 784
+ M+ + AN + ++ + E A + +M G+ ++++YN+++
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 785 VDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCG 822
GR+ D +M+ I P+ TF +L K G
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEG 342
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 146/544 (26%), Positives = 239/544 (43%), Gaps = 73/544 (13%)
Query: 198 NIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGG-LKEEAVCWLERMN 256
NI+L+ L +R + ++++ M GI+P T+ T++D C K G L+ WLE M
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLE-MK 265
Query: 257 EGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVN 316
+E EVT I++ + K G+ ++A F HG+ ++
Sbjct: 266 RRNIEFSEVTYNILINGFSKNGKMEEARRF-----------HGDMRRS-----------G 303
Query: 317 GSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVD 376
+++ Y++N LI+ Y K G +A +ML GI PTT T+N I + ++ +
Sbjct: 304 FAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363
Query: 377 SLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAY 436
L+ M PD +YN L+ + K K AS F ++ ++ P IV+Y TL+
Sbjct: 364 ELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419
Query: 437 SIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE 496
+ A+ L EM + D T + L + +++ G L + + G + +
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG-IKPD 478
Query: 497 GYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSM- 555
GY+ GE +G + DKA L + M
Sbjct: 479 GYAYTTRAVGE-------------------------------LRLG-DSDKAFRLHEEMV 506
Query: 556 -TSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQ 614
T H A PD YN I L A + RK+ GLV D + Y VI Y++ GQ
Sbjct: 507 ATDHHA-PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQ 565
Query: 615 LEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNS 674
+MA +Y +M+R + P V+ Y VLI A G ++QA Y M+ G+ PN + +N+
Sbjct: 566 FKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNA 625
Query: 675 LIKLYTKVGYLKEAQETYKLLRSLE---ASPDVYTSNCMIDLYSERSMVRQAEEIFEIMK 731
L+ K G + EA Y+ L +E P+ Y+ +I S+ + EE+ ++ K
Sbjct: 626 LLYGMCKAGNIDEA---YRYLCKMEEEGIPPNKYSYTMLI---SKNCDFEKWEEVVKLYK 679
Query: 732 KKGD 735
+ D
Sbjct: 680 EMLD 683
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 227/497 (45%), Gaps = 14/497 (2%)
Query: 325 NTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEE 384
N ++ + + +AS + M+ GI+PT +TFNTM+ L VD + +M+
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 266
Query: 385 LHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCE 444
+ TYNILI +KN K+ A R+ M+ + S+ L+ Y + + +
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDD 326
Query: 445 AEELISEMDGGGLEIDEYTQSALTRMYIEA----GMLEKSWLWFRRFHLAGDMSSEGYSA 500
A + EM G+ Y ++ +YI A G ++ + A D+ S Y+
Sbjct: 327 AWGVTDEMLNAGI----YPTTSTYNIYICALCDFGRIDDARELLSSMA-APDVVS--YNT 379
Query: 501 NIDGYGERGHVLEAERAFICCQEGK-KLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHG 559
+ GY + G +EA F + G +++ +N ++ N + A L + MT+
Sbjct: 380 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 439
Query: 560 AVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAE 619
PD +Y +L++ MA +M G+ D Y ++LG + A
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 499
Query: 620 EVYKDMIRFNVE-PDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKL 678
++++M+ + PD+ +Y V I+ VGN+ +A + + GL P+ V Y ++I+
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 559
Query: 679 YTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DAN 737
Y + G K A+ Y + P V T +I +++ + QA + MKK+G N
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Query: 738 EFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFK 797
T+ +L + G +EA R +M E G+ + SY ++ ++++V+ +K
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYK 679
Query: 798 DMVNAAIQPDDFTFKSL 814
+M++ I+PD +T ++L
Sbjct: 680 EMLDKEIEPDGYTHRAL 696
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 193/461 (41%), Gaps = 50/461 (10%)
Query: 406 KISMASRY---FWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEY 462
K SMA ++ F KM P + + +L RM+ +A + M G+
Sbjct: 180 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 239
Query: 463 TQSALTRMYIEAGMLE---KSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAF- 518
T + + +AG LE K WL +R ++ + S Y+ I+G+ + G + EA R
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNI--EFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 519 ICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGAD 578
+ G +T FN +++ Y +D A + D M + G P +YN I I A D
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYN--IYICALCD 355
Query: 579 LPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYG 638
+ R++ + D + Y ++ Y+K+G+ A ++ D+ ++ P +V Y
Sbjct: 356 FGRIDDA--RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 413
Query: 639 VLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETY------ 692
LI+ + GN++ AQ + M + + P+ + Y +L+K + K G L A E Y
Sbjct: 414 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473
Query: 693 ------------------------------KLLRSLEASPDVYTSNCMID-LYSERSMVR 721
+++ + +PD+ N ID L ++V+
Sbjct: 474 GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVK 533
Query: 722 QAEEIFEIMKKKGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLG 781
E +I + + TY ++ Y NG+F+ A + +M L +++Y ++
Sbjct: 534 AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIY 593
Query: 782 LYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCG 822
+A GR + +M ++P+ T +L + K G
Sbjct: 594 GHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAG 634
>sp|O65567|PP342_ARATH Pentatricopeptide repeat-containing protein At4g30825,
chloroplastic OS=Arabidopsis thaliana GN=At4g30825 PE=2
SV=2
Length = 904
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 162/748 (21%), Positives = 317/748 (42%), Gaps = 101/748 (13%)
Query: 167 ILK--EQSSWERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKG 224
ILK E S A++ F+W + N + Y+++LR LG+ +W + L E+ G
Sbjct: 145 ILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELC--G 202
Query: 225 IVPINSTY---GTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQ 281
+Y T+I C+K G + A W M E G+ P+ T+G+++ +Y+K +
Sbjct: 203 FHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVE 262
Query: 282 KAEEFFKK-----------WSSRES----LRHGEDTKTMIGKVENGSHVNGSLSSYTYNT 326
+AE F +SS + LR + + +I ++ V L ++
Sbjct: 263 EAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQ-DRVRLKLENWL--V 319
Query: 327 LIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELH 386
+++ Y + G+++ A M G P + +NT+I YG ++ L ++ +
Sbjct: 320 MLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIG 379
Query: 387 CPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLL------------- 433
PD +Y +I + D A Y+ ++K +P+ + TL+
Sbjct: 380 LEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAI 439
Query: 434 ------------YAYSIRRMVCEAEELISEMD----------GGGLEIDEYTQSALTRMY 471
Y+ SI ++ +A E + ++D + +++ + S+L Y
Sbjct: 440 KTIEDMTGIGCQYS-SILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAY 498
Query: 472 IEAGML--------EKSW----LWFRRFHL-------AGDMSS----------------- 495
++ GM+ EK W +HL +G ++
Sbjct: 499 VKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINL 558
Query: 496 EGYSANIDGYGERGHVLEAERAFICCQE-GKKLTVLVFNVMVKAYGMGRNYDKACNLFDS 554
S ID Y G EAE+ ++ + G L + F+++V+ Y + ++AC++ +
Sbjct: 559 HITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEI 618
Query: 555 MTSH-GAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLG 613
M VPD + +++I DL + +++++G+ + Y VI+ +
Sbjct: 619 MDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARAL 678
Query: 614 QLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYN 673
L+ +++MIR+ P+ V + VL++ + K+ F + G+ + + YN
Sbjct: 679 PLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYN 737
Query: 674 SLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKK 733
++I Y K K ++ S + N ++D Y + + + I + MKK
Sbjct: 738 TIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKS 797
Query: 734 GDA-NEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDV 792
+ +TY +M+ +Y G +E + K+++ESGL DL SYN ++ Y + G ++
Sbjct: 798 TSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEA 857
Query: 793 IGTFKDMVNAAIQPDDFTFKSLGAVLMK 820
+G K+M I PD T+ +L L +
Sbjct: 858 VGLVKEMRGRNIIPDKVTYTNLVTALRR 885
Score = 113 bits (283), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 121/625 (19%), Positives = 258/625 (41%), Gaps = 44/625 (7%)
Query: 174 WERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYG 233
+++A E+ + K Q+ L + ++ +ML + K +S+ M G P Y
Sbjct: 295 YDKAEEVIDLMK-QDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYN 353
Query: 234 TLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSS- 292
TLI K E A R+ G+EPDE + +++ + +A +++A+ ++++
Sbjct: 354 TLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRC 413
Query: 293 -------------RESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKE 339
++G D I +E+ + + SS ++ Y K G++
Sbjct: 414 GYKPNSFNLFTLINLQAKYG-DRDGAIKTIEDMTGIGCQYSS-ILGIILQAYEKVGKIDV 471
Query: 340 ASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIF 399
I +F++++ Y + + + L+++ + ++ Y++LI
Sbjct: 472 VPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLIC 531
Query: 400 LHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEI 459
++ +++ A + + E++ E ++ T++ Y++ EAE+L + G+ +
Sbjct: 532 SCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVL 591
Query: 460 DEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFI 519
D S + RMY++AG LE++ D+ + Y + R +
Sbjct: 592 DRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFR-----------DMLRIYQ 640
Query: 520 CCQEGKKLTVL--------------VFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKC 565
C KL L ++N ++ D+ F+ M +G P+
Sbjct: 641 KCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTV 700
Query: 566 SYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDM 625
++N L+ + A L + G+V D I Y +I++Y K K+M
Sbjct: 701 TFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSAIKNM 759
Query: 626 IRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYL 685
+ Y L++A+ +++ +S M+ + P+ YN +I +Y + G++
Sbjct: 760 QFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWI 819
Query: 686 KEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGD-ANEFTYAMM 744
E + K L+ PD+ + N +I Y MV +A + + M+ + ++ TY +
Sbjct: 820 DEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNL 879
Query: 745 LIMYKRNGRFEEATRIAKQMRESGL 769
+ +RN F EA + + M++ G+
Sbjct: 880 VTALRRNDEFLEAIKWSLWMKQMGI 904
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 231/494 (46%), Gaps = 7/494 (1%)
Query: 336 QLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYN 395
+L +A F M++ +P+ FN ++ + V SL +KM+ L + TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 396 ILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGG 455
ILI + +IS+A KM + EP IV+ +LL Y + + +A L+ +M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 456 GLEIDEYTQSALTR-MYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEA 514
G D T + L +++ E L R + Y ++G +RG + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 515 ERAFICCQEGK-KLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQI 573
+ K + V++++ ++ + R+ D A NLF M + G P+ +Y+SLI
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 574 LAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPD 633
L + A R L M E + + + + A+I +++K G+L AE++Y +MI+ +++PD
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 634 VVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYK 693
+ Y LIN F + +A+ F+ M S PN V YN+LI + K + E E ++
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 694 LL--RSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKR 750
+ R L + YT+ +I + + A+ +F+ M G N TY +L +
Sbjct: 425 EMSQRGLVGNTVTYTT--LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Query: 751 NGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFT 810
NG+ E+A + + ++ S + + +YN ++ G+ +D F + ++PD
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVII 542
Query: 811 FKSLGAVLMKCGLE 824
+ ++ + + GL+
Sbjct: 543 YNTMISGFCRKGLK 556
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 197/423 (46%), Gaps = 14/423 (3%)
Query: 320 SSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLI 379
S T ++L++ Y ++ +A QM+ G P T+TF T+IH +++ +E +L+
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 380 KKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIR 439
+M + C P+ TY +++ K I +A KM+ A +E ++V Y T++ +
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKY 273
Query: 440 RMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE--- 496
R +A L +EM+ G+ + T S+L L W L DM
Sbjct: 274 RHEDDALNLFTEMENKGVRPNVITYSSLI------SCLCNYERWSDASRLLSDMIERKIN 327
Query: 497 ----GYSANIDGYGERGHVLEAERAFI-CCQEGKKLTVLVFNVMVKAYGMGRNYDKACNL 551
++A ID + + G ++EAE+ + + + ++ ++ + M D+A ++
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 552 FDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMK 611
F+ M S P+ +YN+LI A R+M + GLV + + Y +I + +
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 612 LGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVI 671
+ A+ V+K M+ V P+++ Y L++ G +++A F+ ++ + + P
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 672 YNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMK 731
YN +I+ K G +++ + + L PDV N MI + + + +A+ +F M+
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Query: 732 KKG 734
+ G
Sbjct: 568 EDG 570
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 212/467 (45%), Gaps = 29/467 (6%)
Query: 322 YTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKK 381
YTYN LI+ + + Q+ A +M++ G P+ VT +++++ Y + ++++ +L+ +
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 382 MEELHCPPDTRTYNILI---FLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSI 438
M E+ PDT T+ LI FLH +K S A +M + +P++V+Y ++
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLH---NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 439 RRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRR----FHLAGDMS 494
R + A L+++M+ +E + S + S +R +L +M
Sbjct: 238 RGDIDLAFNLLNKMEAAKIEANVVIYSTVI----------DSLCKYRHEDDALNLFTEME 287
Query: 495 SEGYSANIDGYGERGHVL-------EAERAFICCQEGK-KLTVLVFNVMVKAYGMGRNYD 546
++G N+ Y L +A R E K V+ FN ++ A+
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 547 KACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVI 606
+A L+D M PD +Y+SLI D AK M + + Y +I
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 607 SSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLP 666
+ + K +++ E++++M + + + V Y LI+ F + AQ F M S G+
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 667 PNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEI 726
PN + YN+L+ K G L++A ++ L+ + P +YT N MI+ + V ++
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 727 FEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISD 772
F + KG + Y M+ + R G EEA + ++MRE G + D
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 188/434 (43%), Gaps = 35/434 (8%)
Query: 190 HELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAV 249
+E +++ + +L ++ S +L D+M G P T+ TLI EAV
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 250 CWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSR-------------ESL 296
++RM + G +P+ VT G+VV K G+ A K + +SL
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 297 ---RHGEDTKTMIGKVEN-GSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGI 352
RH +D + ++EN G N TY++LI + +AS + M+ I
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPN----VITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 353 VPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASR 412
P VTFN +I + +L E + L +M + PD TY+ LI +D++ A
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 413 YFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYI 472
F M + P++V+Y TL+ + + + E EL EM GL + T + L +
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 473 EAGMLEKSWLWFRRFHLAGDMSSEGYSANI-------DGYGERGHVLEAERAFICCQEGK 525
+A + + + F++ M S+G NI DG + G + +A F Q K
Sbjct: 447 QARDCDNAQMVFKQ------MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 526 -KLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAK 584
+ T+ +N+M++ + +LF S++ G PD YN++I L A
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 585 RYLRKMQEAGLVSD 598
RKM+E G + D
Sbjct: 561 ALFRKMREDGPLPD 574
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 142/323 (43%), Gaps = 19/323 (5%)
Query: 191 ELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVC 250
E NV+ Y+ ++ +L K R +L+ EM KG+ P TY +LI +A
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316
Query: 251 WLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRE---------SLRHGED 301
L M E + P+ VT ++ + K G+ +AE+ + + R SL +G
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF- 375
Query: 302 TKTMIGKVENGSHVNGSLSS-------YTYNTLIDTYGKAGQLKEASETFAQMLREGIVP 354
M +++ H+ + S TYNTLI+ + KA ++ E E F +M + G+V
Sbjct: 376 --CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 355 TTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYF 414
TVT+ T+IH + + K+M P+ TYN L+ KN K+ A F
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 415 WKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEA 474
++ + +EP I +Y ++ V + +L + G++ D + + +
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 475 GMLEKSWLWFRRFHLAGDMSSEG 497
G+ E++ FR+ G + G
Sbjct: 554 GLKEEADALFRKMREDGPLPDSG 576
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 23/219 (10%)
Query: 175 ERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGT 234
+ A +FE ++C NV+ YN ++ KA++ L+ EMS +G+V TY T
Sbjct: 382 DEAKHMFELMISKDCFP-NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 235 LIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRE 294
LI + + A ++M G+ P+ +T ++ K G+ +KA F E
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF------E 494
Query: 295 SLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVP 354
L+ + T+ YTYN +I+ KAG++++ + F + +G+ P
Sbjct: 495 YLQRSKMEPTI----------------YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 538
Query: 355 TTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRT 393
+ +NTMI + E D+L +KM E PD+ T
Sbjct: 539 DVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 162/667 (24%), Positives = 277/667 (41%), Gaps = 41/667 (6%)
Query: 165 SIILKEQSSWERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKG 224
S++ + + + E+F F + Y ++ L +++ S L+ + +G
Sbjct: 80 SLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEG 139
Query: 225 IVPINSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAE 284
I P + + L+D K + + E P + G +Q K + K
Sbjct: 140 IYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGL 199
Query: 285 EFFKKWSSRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETF 344
E F + H S + YN LID K ++ +A + F
Sbjct: 200 ELFNRMK----------------------HDRIYPSVFIYNVLIDGLCKGKRMNDAEQLF 237
Query: 345 AQMLREGIVPTTVTFNTMIHIY---GNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLH 401
+ML ++P+ +T+NT+I Y GN ++ +V ++M+ H P T+N L+
Sbjct: 238 DEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVR---ERMKADHIEPSLITFNTLLKGL 294
Query: 402 AKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDE 461
K + A +MK+ PD ++ L YS A + G++++
Sbjct: 295 FKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNA 354
Query: 462 YTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEG-YSANIDGYGERGHVLEAERAFIC 520
YT S L + G +EK+ R G + +E Y+ IDGY +G ++ A
Sbjct: 355 YTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEA 414
Query: 521 CQ-EGKKLTVLVFNVMVKAY---GMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAG 576
+ +G K L +N +++ + G N +K N M G P +YN LI
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVN---KMKLKGVSPSVETYNILIGGYGR 471
Query: 577 ADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVV 636
L++M++ G + + + Y +I+ K +L A+ V +DM V P V +
Sbjct: 472 KYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI 531
Query: 637 YGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLR 696
Y +LI+ G ++ A + M G+ N V YN+LI + G L EA++ +
Sbjct: 532 YNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEIS 591
Query: 697 SLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGDANEF-TYAMMLIMYKRNGRFE 755
PDV+T N +I Y V++ ++E MK+ G TY +++ + + G E
Sbjct: 592 RKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IE 650
Query: 756 EATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLG 815
R+ +M L DLL YN VL YAV G + K M+ +I D T+ SL
Sbjct: 651 LTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLI 707
Query: 816 AVLMKCG 822
+K G
Sbjct: 708 LGQLKVG 714
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 141/584 (24%), Positives = 259/584 (44%), Gaps = 32/584 (5%)
Query: 172 SSWERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINST 231
S + LE+F K + +V YN+++ L K ++ + + L+DEM + ++P T
Sbjct: 193 SDVGKGLELFNRMKHDRIYP-SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLIT 251
Query: 232 YGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWS 291
Y TLID K G E++ ERM +EP +T +++ KAG + AE K+
Sbjct: 252 YNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK 311
Query: 292 SR-------------ESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLK 338
+ E + +G E +++YT + L++ K G+++
Sbjct: 312 DLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIE 371
Query: 339 EASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILI 398
+A E + + +G+VP V +NTMI Y L I+ ME+ PD YN LI
Sbjct: 372 KAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLI 431
Query: 399 FLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLE 458
+ ++ A + KMK + P + +Y L+ Y + + +++ EM+ G
Sbjct: 432 RRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM 491
Query: 459 IDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEG-------YSANIDGYGERGHV 511
+ + L + L ++ + R DM G Y+ IDG +G +
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKR------DMEDRGVSPKVRIYNMLIDGCCSKGKI 545
Query: 512 LEAER-AFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSL 570
+A R + ++G +L ++ +N ++ M +A +L ++ G PD +YNSL
Sbjct: 546 EDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605
Query: 571 IQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNV 630
I A +M+ +G+ Y +IS K G +E+ E ++ +M ++
Sbjct: 606 ISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEM---SL 661
Query: 631 EPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQE 690
+PD++VY +++ +A G++++A + M + + YNSLI KVG L E +
Sbjct: 662 KPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRS 721
Query: 691 TYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG 734
+ + E P+ T N ++ + E A + M++KG
Sbjct: 722 LIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 128/530 (24%), Positives = 218/530 (41%), Gaps = 38/530 (7%)
Query: 320 SSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLI 379
S + Y I K + + E F +M + I P+ +N +I ++ + + L
Sbjct: 178 SKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLF 237
Query: 380 KKMEELHCPPDTRTYNILI--FLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYS 437
+M P TYN LI + A N + S R +MK ++EP ++++ TLL
Sbjct: 238 DEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVR--ERMKADHIEPSLITFNTLLKGLF 295
Query: 438 IRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEG 497
MV +AE ++ EM G D +T S L +G
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILF---------------------------DG 328
Query: 498 YSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTS 557
YS+N G V E G K+ ++++ A +KA + +
Sbjct: 329 YSSNEKAEAALG-VYET-----AVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMA 382
Query: 558 HGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEM 617
G VP++ YN++I A+ + M++ G+ D + Y +I + +LG++E
Sbjct: 383 KGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMEN 442
Query: 618 AEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIK 677
AE+ M V P V Y +LI + + ME G PN V Y +LI
Sbjct: 443 AEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Query: 678 LYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DA 736
K L EAQ + + SP V N +ID + + A + M KKG +
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 737 NEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTF 796
N TY ++ G+ EA + ++ GL D+ +YN+++ Y G + I +
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 797 KDMVNAAIQPDDFTFKSLGAVLMKCGLELTRKKNAQSGLQAWMSTLSSVI 846
++M + I+P T+ L ++ K G+ELT + + L+ + + V+
Sbjct: 623 EEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVL 672
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 147/579 (25%), Positives = 253/579 (43%), Gaps = 69/579 (11%)
Query: 193 NVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWL 252
+V YN ++R + ++ L +EM G T+G LID K G +EA+ +L
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235
Query: 253 ERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENG 312
+ M G+E D V +++ + GE + + F E L G+
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFD-----EVLERGD------------ 278
Query: 313 SHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQL 372
S + TYNTLI + K GQLKEASE F M+ G+ P T+ +I +
Sbjct: 279 -----SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 373 AEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTL 432
E L+ M E P+ TYNI+I K+ ++ A MK+ PD ++Y L
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 433 LYAYSIRRMVCEAEELISEM--DGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLA 490
L + + EA +L+ M D + D + +AL G+ +++ R H A
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH-----GLCKEN-----RLHQA 443
Query: 491 GDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACN 550
D+ Y ++ G G ++T N+++ + + +KA
Sbjct: 444 LDI----YDLLVEKLGA----------------GDRVTT---NILLNSTLKAGDVNKAME 480
Query: 551 LFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYM 610
L+ ++ V + +Y ++I + ++AK L KM+ + L Y ++SS
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540
Query: 611 KLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAV 670
K G L+ A ++++M R N PDVV + ++I+ G++K A+S M AGL P+
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600
Query: 671 IYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAE--EIFE 728
Y+ LI + K+GYL EA + + PD + + ++ + + Q E ++ E
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL-----KYCISQGETDKLTE 655
Query: 729 IMKKKGDAN-----EFTYAMMLIMYKRNGRFEEATRIAK 762
++KK D + E T +M M + + A R+ +
Sbjct: 656 LVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLR 694
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/496 (21%), Positives = 215/496 (43%), Gaps = 7/496 (1%)
Query: 318 SLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDS 377
+ + Y +N L+ + + +A +M R ++P ++NT+I + +L +
Sbjct: 139 AFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALE 198
Query: 378 LIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYS 437
L +M+ C T+ ILI K K+ A + +MK LE D+V Y +L+ +
Sbjct: 199 LANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFC 258
Query: 438 IRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE- 496
+ + L E+ G T + L R + + G L+++ F F + +
Sbjct: 259 DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF-EFMIERGVRPNV 317
Query: 497 -GYSANIDGYGERGHVLEAERAF-ICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDS 554
Y+ IDG G EA + + ++ ++ + +N+++ A + +
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVEL 377
Query: 555 MTSHGAVPDKCSYNSLI-QILAGADLPHMAKRYLRKMQEAGLVS-DCIPYCAVISSYMKL 612
M PD +YN L+ + A DL +K ++++ D I Y A+I K
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKE 437
Query: 613 GQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIY 672
+L A ++Y ++ D V +L+N+ G+V +A + + + + N+ Y
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 673 NSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKK 732
++I + K G L A+ +R E P V+ NC++ + + QA +FE M++
Sbjct: 498 TAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR 557
Query: 733 KGD-ANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKD 791
+ + ++ +M+ + G + A + M +GL DL +Y+ ++ + G +
Sbjct: 558 DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE 617
Query: 792 VIGTFKDMVNAAIQPD 807
I F MV++ +PD
Sbjct: 618 AISFFDKMVDSGFEPD 633
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 10/328 (3%)
Query: 529 VLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLR 588
V +N +++ + G+ +KA L + M G ++ LI A A +L+
Sbjct: 177 VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLK 236
Query: 589 KMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVG 648
+M+ GL +D + Y ++I + G+L+ + ++ +++ P + Y LI F +G
Sbjct: 237 EMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296
Query: 649 NVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSN 708
+K+A F+ M G+ PN Y LI VG KEA + L+ + P+ T N
Sbjct: 297 QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYN 356
Query: 709 CMIDLYSERSMVRQAEEIFEIMKK-KGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRES 767
+I+ + +V A EI E+MKK + + TY ++L G +EA+++ M +
Sbjct: 357 IIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416
Query: 768 GLIS--DLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCGLEL 825
+ D++SYN ++ + R + + +V D T L +K G
Sbjct: 417 SSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG--- 473
Query: 826 TRKKNAQSGLQAWMSTLSSVIEECDDDY 853
+ ++ W S I D Y
Sbjct: 474 ----DVNKAMELWKQISDSKIVRNSDTY 497
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 127/565 (22%), Positives = 226/565 (40%), Gaps = 60/565 (10%)
Query: 247 EAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMI 306
+AV L M + PD + V++ + + E +KA E +
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK--------------- 204
Query: 307 GKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIY 366
GS + SL T+ LID + KAG++ EA +M G+ V + ++I +
Sbjct: 205 -----GSGCSWSL--VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGF 257
Query: 367 GNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDI 426
+ +L +L ++ E P TYN LI K ++ AS F M E + P++
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNV 317
Query: 427 VSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRR 486
+Y L+ EA +L++ M +E DE +A+T
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLM----IEKDE-EPNAVT------------------ 354
Query: 487 FHLAGDMSSEGYSANIDGYGERGHVLEA-ERAFICCQEGKKLTVLVFNVMVKAYGMGRNY 545
Y+ I+ + G V +A E + + + + +N+++ +
Sbjct: 355 -----------YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Query: 546 DKACNLFDSMTSHGAV--PDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYC 603
D+A L M + PD SYN+LI L + H A + E D +
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 604 AVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESA 663
+++S +K G + A E++K + + + Y +I+ F G + A+ M +
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523
Query: 664 GLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQA 723
L P+ YN L+ K G L +A ++ ++ PDV + N MID + ++ A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
Query: 724 EEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGL 782
E + M + G + FTY+ ++ + + G +EA +M +SG D ++VL
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643
Query: 783 YAVDGRFKDVIGTFKDMVNAAIQPD 807
G + K +V+ I D
Sbjct: 644 CISQGETDKLTELVKKLVDKDIVLD 668
Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 184/459 (40%), Gaps = 50/459 (10%)
Query: 409 MASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALT 468
+A ++ KM E + + VS LL Y R A +++ M G + Y + L
Sbjct: 90 LAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILL 149
Query: 469 RMY---IEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQE-- 523
+ +E G RR L D+ S Y+ I G+ E E E+A E
Sbjct: 150 KGLCRNLECGKAVSLLREMRRNSLMPDVFS--YNTVIRGFCEGK---ELEKALELANEMK 204
Query: 524 --GKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPH 581
G +++ + +++ A+ D+A M G D Y SLI+
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 582 MAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLI 641
K ++ E G I Y +I + KLGQL+ A E+++ MI V P+V Y LI
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 642 NAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSL--- 698
+ VG K+A + M PNAV YN +I K G + +A E +L++
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Query: 699 --------------------EAS--------------PDVYTSNCMIDLYSERSMVRQAE 724
EAS PDV + N +I + + + QA
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 725 EIFEIMKKK-GDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLY 783
+I++++ +K G + T ++L + G +A + KQ+ +S ++ + +Y ++ +
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 784 AVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCG 822
G G M + +QP F + L + L K G
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEG 543
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/438 (19%), Positives = 179/438 (40%), Gaps = 20/438 (4%)
Query: 191 ELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLI-DVCSKGGLKEEAV 249
E +++ Y ++R + ++L+DE+ +G P TY TLI C G LKE +
Sbjct: 244 EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303
Query: 250 CWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKV 309
+ E M E G+ P+ T ++ G+ ++A + ++ + +I K+
Sbjct: 304 IF-EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Query: 310 ENGSHVNGSL-------------SSYTYNTLIDTYGKAGQLKEASETFAQMLREG--IVP 354
V ++ + TYN L+ G L EAS+ ML++ P
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422
Query: 355 TTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYF 414
+++N +IH ++L + + + E D T NIL+ K ++ A +
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 415 WKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEA 474
++ ++ + + +Y ++ + M+ A+ L+ +M L+ + + L +
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 475 GMLEKSWLWFRRFHLAGDMSS-EGYSANIDGYGERGHVLEAERAFI-CCQEGKKLTVLVF 532
G L+++W F + ++ IDG + G + AE + + G + +
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 533 NVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQE 592
+ ++ + D+A + FD M G PD +S+++ ++K+ +
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Query: 593 AGLVSDCIPYCAVISSYM 610
+V D C V+ YM
Sbjct: 663 KDIVLDKELTCTVM-DYM 679
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 114/262 (43%), Gaps = 3/262 (1%)
Query: 568 NSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIR 627
N+L+ L + +A + RKM E + + ++ Y+++ + A V M++
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 628 FNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKE 687
+V + +L+ +A S M L P+ YN++I+ + + L++
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 688 AQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLI 746
A E ++ S + T +ID + + + +A + MK G +A+ Y ++
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 747 MYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQP 806
+ G + + ++ E G ++YN ++ + G+ K+ F+ M+ ++P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 807 DDFTFKSLGAVLMKCGLELTRK 828
+ +T+ L L CG+ T++
Sbjct: 316 NVYTYTGLIDGL--CGVGKTKE 335
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 156 bits (394), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 234/493 (47%), Gaps = 23/493 (4%)
Query: 320 SSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLI 379
++ T++TLI+ G++ EA E +M+ G P +T NT+++ + + AE LI
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 380 KKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIR 439
KM E C P+ TY ++ + K+ + ++A KM+E N++ D V Y ++
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 440 RMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYS 499
+ A L +EM+ G+ + T + L + AG W L DM +
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR------WDDGAKLLRDMIKRKIN 330
Query: 500 AN-------IDGYGERGHVLEAE---RAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKAC 549
N ID + + G + EAE + I G + + ++ + + DKA
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMI--HRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 550 NLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSY 609
+ D M S G P+ ++N LI A+ RKM G+V+D + Y +I +
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 610 MKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNA 669
+LG+L +A+E++++M+ V P++V Y +L++ D G ++A F+ +E + + +
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 670 VIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEI 729
IYN +I + +A + + L P V T N MI ++ + +AE +F
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Query: 730 MKKKGDANE-FTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGR 788
M++ G A + +TY +++ + +G ++ ++ ++++ G D + V+ + + DGR
Sbjct: 569 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS-DGR 627
Query: 789 FKDVIGTFKDMVN 801
K +F DM++
Sbjct: 628 LKK---SFLDMLS 637
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/501 (23%), Positives = 213/501 (42%), Gaps = 31/501 (6%)
Query: 339 EASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILI 398
+A + F M+ +PT + F+ + Q V +L K+ME + T +I+I
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 399 FLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLE 458
+ K+ +A K+ + EP+ +++ TL+ + V EA EL+ M G +
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 459 IDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAF 518
D T + L +G ++ L + M G N YG +V+
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDK------MVEYGCQPNAVTYGPVLNVM------ 238
Query: 519 ICCQEGK----------------KLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVP 562
C+ G+ KL + +++++ + D A NLF+ M G
Sbjct: 239 --CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 563 DKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVY 622
+ +YN LI A + LR M + + + + + +I S++K G+L AEE++
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 623 KDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKV 682
K+MI + PD + Y LI+ F ++ +A D M S G PN +N LI Y K
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 683 GYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIF-EIMKKKGDANEFTY 741
+ + E ++ + D T N +I + E + A+E+F E++ +K N TY
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 742 AMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVN 801
++L NG E+A I +++ +S + D+ YN ++ + D F +
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 802 AAIQPDDFTFKSLGAVLMKCG 822
++P T+ + L K G
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKG 557
Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 122/531 (22%), Positives = 218/531 (41%), Gaps = 63/531 (11%)
Query: 190 HELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAV 249
+E N I ++ ++ L + S L D M G P T TL++ G + EA+
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 250 CWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKV 309
+++M E G +P+ VT G V+ + K+G+ A E +K R
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER---------------- 257
Query: 310 ENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNN 369
N L + Y+ +ID K G L A F +M +GI +T+N +I + N
Sbjct: 258 ------NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 370 DQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSY 429
+ + L++ M + P+ T+++LI K K+ A +M + PD ++Y
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 430 RTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHL 489
+L+ + + +A +++ M G + + T + L Y +A ++ FR+ L
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431
Query: 490 AGDMS-SEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKA 548
G ++ + Y+ I G+ E G KL V A
Sbjct: 432 RGVVADTVTYNTLIQGFCELG----------------KLNV------------------A 457
Query: 549 CNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISS 608
LF M S P+ +Y L+ L A K++++ + D Y +I
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 517
Query: 609 YMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPN 668
+++ A +++ + V+P V Y ++I G + +A+ F ME G P+
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 577
Query: 669 AVIYNSLIKLYTKVGYLKEAQETYKLLRSLEA---SPDVYTSNCMIDLYSE 716
YN LI+ + G +A ++ KL+ L+ S D T +ID+ S+
Sbjct: 578 GWTYNILIRAHLGDG---DATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 625
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 115/270 (42%), Gaps = 1/270 (0%)
Query: 546 DKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAV 605
D A +LF M +P ++ L +A + ++M+ G+ + +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 606 ISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGL 665
I+ + + +L +A +I+ EP+ + + LIN G V +A D M G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 666 PPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEE 725
P+ + N+L+ G EA + P+ T ++++ + A E
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 726 IFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYA 784
+ M+++ + Y++++ ++G + A + +M G+ +++++YN ++G +
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 785 VDGRFKDVIGTFKDMVNAAIQPDDFTFKSL 814
GR+ D +DM+ I P+ TF L
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
>sp|Q9ZU27|PPR76_ARATH Pentatricopeptide repeat-containing protein At1g51965,
mitochondrial OS=Arabidopsis thaliana GN=At1g51965 PE=2
SV=1
Length = 650
Score = 155 bits (393), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 131/549 (23%), Positives = 241/549 (43%), Gaps = 68/549 (12%)
Query: 232 YGTLIDVCSKGGLKEE---AVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFK 288
Y +I + S+ L + L+ M + + + T+ I++ + + Q K
Sbjct: 136 YNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVK 195
Query: 289 KWSSRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQML 348
KW + ++S+TY L+ Y ++ +A + + ++
Sbjct: 196 KWDLK-------------------------MNSFTYKCLLQAYLRSRDYSKAFDVYCEIR 230
Query: 349 REGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKIS 408
R G +N ++ +++ +V + M++ HC D TY I+I + K
Sbjct: 231 RGGHKLDIFAYNMLLDALAKDEKACQV---FEDMKKRHCRRDEYTYTIMIRTMGRIGKCD 287
Query: 409 MASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALT 468
A F +M L ++V Y TL+ + +MV +A ++ S M G +EYT S L
Sbjct: 288 EAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLL 347
Query: 469 RMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLT 528
+ + +EG +DG V+E + + +T
Sbjct: 348 NLLV----------------------AEGQLVRLDG------VVEISKRY--------MT 371
Query: 529 VLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLR 588
+++ +V+ + +A LF M S ++ SY S+++ L GA A L
Sbjct: 372 QGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLS 431
Query: 589 KMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVG 648
K+ E G+V+D + Y V S+ KL Q+ ++++ M + PD+ Y +LI +F VG
Sbjct: 432 KIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVG 491
Query: 649 NVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSN 708
V +A + F+ +E + P+ + YNSLI K G + EA +K ++ +PDV T +
Sbjct: 492 EVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYS 551
Query: 709 CMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRES 767
+++ + + V A +FE M KG N TY ++L ++NGR EA + +M++
Sbjct: 552 TLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQ 611
Query: 768 GLISDLLSY 776
GL D ++Y
Sbjct: 612 GLTPDSITY 620
Score = 126 bits (317), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/475 (22%), Positives = 206/475 (43%), Gaps = 53/475 (11%)
Query: 138 MLQALDTVKDLDEALKPWAE------NLSNKERSIILKEQSSWERALEIFEWFKRQECHE 191
+LQA +D +A + E L +++L + E+A ++FE K++ C
Sbjct: 209 LLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRR 268
Query: 192 LNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCW 251
+ Y IM+RT+G+ K L++EM +G+ Y TL+ V +KG + ++A+
Sbjct: 269 -DEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQV 327
Query: 252 LERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAE---EFFKKWSSRESLRHGEDTKTMIGK 308
RM E G P+E T +++ + G+ + + E K++ ++ + T + +G
Sbjct: 328 FSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGH 387
Query: 309 VENGSHVNGSLSSY-------TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNT 361
V + + S+ +Y +++++ AG+ EA E +++ +G+V T+ +NT
Sbjct: 388 VSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNT 447
Query: 362 MIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEAN 421
+ G Q++ + L +KM++ PD TYNILI + ++ A F +++ ++
Sbjct: 448 VFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSD 507
Query: 422 LEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSW 481
+PDI+SY +L+ V EA EM GL D T S L + + +E ++
Sbjct: 508 CKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAY 567
Query: 482 LWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGM 541
F + G CQ ++ +N+++
Sbjct: 568 SLFEEMLVKG-----------------------------CQPN----IVTYNILLDCLEK 594
Query: 542 GRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLV 596
+A +L+ M G PD +Y L ++ + H R RK G V
Sbjct: 595 NGRTAEAVDLYSKMKQQGLTPDSITYTVLERL---QSVSHGKSRIRRKNPITGWV 646
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/545 (21%), Positives = 235/545 (43%), Gaps = 48/545 (8%)
Query: 163 ERSIILKEQSSWERALEIFEWFKRQECHELN-VIHYNIMLRTLGKAR---KWSYVQSLWD 218
E S ILK +S A+E F+ + N YN ++ L ++ ++ V+S+ D
Sbjct: 101 EASEILKSLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSILD 160
Query: 219 EMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAG 278
M + ST LI G ++ +C L + + ++ + T ++Q Y ++
Sbjct: 161 SMVKSNVHGNISTVNILIGFF--GNTEDLQMC-LRLVKKWDLKMNSFTYKCLLQAYLRSR 217
Query: 279 EFQKAEEFF---KKWSSRESLRHGEDTKTMIGKVENGSHVNGSLSS-------YTYNTLI 328
++ KA + + ++ + + + K E V + YTY +I
Sbjct: 218 DYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRRDEYTYTIMI 277
Query: 329 DTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCP 388
T G+ G+ EA F +M+ EG+ V +NT++ + + + + +M E C
Sbjct: 278 RTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCR 337
Query: 389 PDTRTYNILIFLHAKNDK-------ISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRM 441
P+ TY++L+ L + + ++ RY + +Y+Y +R +
Sbjct: 338 PNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG---------------IYSYLVRTL 382
Query: 442 -----VCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMS-S 495
V EA L +M ++ + + ++ AG ++ + H G ++ +
Sbjct: 383 SKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDT 442
Query: 496 EGYSANIDGYGERGHVLEAERAF-ICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDS 554
Y+ G+ + F ++G + +N+++ ++G D+A N+F+
Sbjct: 443 MMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEE 502
Query: 555 MTSHGAVPDKCSYNSLIQILA-GADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLG 613
+ PD SYNSLI L D+ R+ ++MQE GL D + Y ++ + K
Sbjct: 503 LERSDCKPDIISYNSLINCLGKNGDVDEAHVRF-KEMQEKGLNPDVVTYSTLMECFGKTE 561
Query: 614 QLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYN 673
++EMA ++++M+ +P++V Y +L++ G +A + M+ GL P+++ Y
Sbjct: 562 RVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYT 621
Query: 674 SLIKL 678
L +L
Sbjct: 622 VLERL 626
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 216/500 (43%), Gaps = 40/500 (8%)
Query: 370 DQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSY 429
D+ V S++ M + + + T NILI + + M R +K+ +L+ + +Y
Sbjct: 150 DRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRL---VKKWDLKMNSFTY 206
Query: 430 RTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHL 489
+ LL AY R +A ++ E+ GG ++D + + L + + + ++ H
Sbjct: 207 KCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHC 266
Query: 490 AGDMSSEGYSANIDGYGERGHVLEAERAFI-CCQEGKKLTVLVFNVMVKAYGMGRNYDKA 548
D + Y+ I G G EA F EG L V+ +N +++ G+ DKA
Sbjct: 267 RRDEYT--YTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKA 324
Query: 549 CNLFDSMTSHGAVPDKCSYNSLIQILAGAD-------LPHMAKRYL---------RKMQE 592
+F M G P++ +Y+ L+ +L + ++KRY+ R + +
Sbjct: 325 IQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSK 384
Query: 593 AGLVSDC---------IPYCAVISSYMKL-------GQLEMAEEVYKDMIRFNVEPDVVV 636
G VS+ P SYM + G+ A E+ + V D ++
Sbjct: 385 LGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMM 444
Query: 637 YGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLR 696
Y + +A + + F+ M+ G P+ YN LI + +VG + EA ++ L
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 697 SLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFE 755
+ PD+ + N +I+ + V +A F+ M++KG + + TY+ ++ + + R E
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 756 EATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLG 815
A + ++M G ++++YN +L +GR + + + M + PD T+ L
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLE 624
Query: 816 AVL-MKCGLELTRKKNAQSG 834
+ + G R+KN +G
Sbjct: 625 RLQSVSHGKSRIRRKNPITG 644
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/559 (23%), Positives = 245/559 (43%), Gaps = 25/559 (4%)
Query: 259 GMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVNGS 318
G P+ VT ++ + K GE +A + FK R G + +
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR-----GIEPDLI------------- 322
Query: 319 LSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSL 378
Y+TLID Y KAG L + F+Q L +G+ V F++ I +Y + LA +
Sbjct: 323 ----AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 379 IKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSI 438
K+M P+ TY ILI ++ +I A + ++ + +EP IV+Y +L+ +
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 439 RRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAG-MLEKSWLWFRRFHLAGDMSSEG 497
+ L +M G D L + G ML + + ++
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 498 YSANIDGYGERGHVLEAERAF-ICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMT 556
+++ IDG+ EA + F + G K V F +++ M ++A LF M
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF 558
Query: 557 SHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLE 616
G PD +Y +LI P + + MQ + +D VI K ++E
Sbjct: 559 KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 618
Query: 617 MAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLI 676
A + + ++I +EPD+V Y +I + + + +A+ F+ ++ PN V LI
Sbjct: 619 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678
Query: 677 KLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGDA 736
+ K + A + ++ + P+ T C++D +S+ + + ++FE M++KG +
Sbjct: 679 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 738
Query: 737 NEF-TYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGT 795
+Y++++ + GR +EAT I Q ++ L+ D+++Y ++ Y GR +
Sbjct: 739 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 798
Query: 796 FKDMVNAAIQPDDFTFKSL 814
++ M+ ++PDD ++L
Sbjct: 799 YEHMLRNGVKPDDLLQRAL 817
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 127/569 (22%), Positives = 239/569 (42%), Gaps = 59/569 (10%)
Query: 224 GIVPINSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKA 283
G P T+ TLI+ K G + A + M + G+EPD + ++ Y KAG
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 284 EEFFKKWSSRESLRHGEDTKTMIGK------VENGSHVNGSL------------SSYTYN 325
+ F ++L G ++ V++G S+ + TY
Sbjct: 341 HKLFS-----QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 326 TLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEEL 385
LI + G++ EA + Q+L+ G+ P+ VT++++I + L +L + M ++
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 386 HCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEA 445
PPD Y +L+ +K + A R+ KM ++ ++V + +L+ + EA
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 446 EELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKS-WLWFRRFHLAGDMSSEGYSANIDG 504
++ M G++ D T + + R+ I G LE++ +L+FR F + + + Y ID
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Query: 505 YGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDK 564
+ C+ K L LFD M + D
Sbjct: 576 F---------------CKHMKPTIGL-------------------QLFDLMQRNKISADI 601
Query: 565 CSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKD 624
N +I +L A ++ + E + D + Y +I Y L +L+ AE +++
Sbjct: 602 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 661
Query: 625 MIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGY 684
+ P+ V +LI+ ++ A F M G PNAV Y L+ ++K
Sbjct: 662 LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 721
Query: 685 LKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIF-EIMKKKGDANEFTYAM 743
++ + + ++ ++ SP + + + +ID +R V +A IF + + K + YA+
Sbjct: 722 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAI 781
Query: 744 MLIMYKRNGRFEEATRIAKQMRESGLISD 772
++ Y + GR EA + + M +G+ D
Sbjct: 782 LIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 133/582 (22%), Positives = 242/582 (41%), Gaps = 73/582 (12%)
Query: 252 LERMNEGGMEPDEVTM-GIVVQMYKKAGEFQKAEEFFKKWSSRESLRHG--EDTKTMIGK 308
+++ GG+EP V+ G V+ GE KA +F + R R G K + G
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMER-GFRVGIVSCNKVLKGL 262
Query: 309 VENGSHVNGSLSSY-----------TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTV 357
+ V L S T+ TLI+ + K G++ A + F M + GI P +
Sbjct: 263 SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 358 TFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKM 417
++T+I Y L L + D ++ I ++ K+ ++ AS + +M
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 418 KEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGML 477
+ P++V+Y L+ + EA + ++ G+E T S+L + + G L
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 478 EKSWLWFRRFHLAGDMSSEGYSANI-------DGYGERGHVLEAERAFI-CCQEGKKLTV 529
F L DM GY ++ DG ++G +L A R + + +L V
Sbjct: 443 RSG------FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496
Query: 530 LVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRK 589
+VFN ++ + +D+A +F M +G PD ++ +++++
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV---------------- 540
Query: 590 MQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGN 649
S M+ G+LE A ++ M + +EPD + Y LI+AF
Sbjct: 541 ------------------SIME-GRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 650 VKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNC 709
FD M+ + + + N +I L K +++A + + L + PD+ T N
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 710 MIDLYSERSMVRQAEEIFEIMK-KKGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESG 768
MI Y + +AE IFE++K N T +++ + +N + A R+ M E G
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Query: 769 LISDLLSYNNVLGLYA----VDGRFKDVIGTFKDMVNAAIQP 806
+ ++Y ++ ++ ++G FK F++M I P
Sbjct: 702 SKPNAVTYGCLMDWFSKSVDIEGSFK----LFEEMQEKGISP 739
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/492 (21%), Positives = 202/492 (41%), Gaps = 34/492 (6%)
Query: 191 ELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVC 250
+L+V+ ++ + K+ + ++ M +GI P TY LI + G EA
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 251 WLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVE 310
++ + GMEP VT ++ + K G + ++ + ++ G +I
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYE-----DMIKMGYPPDVVI---- 463
Query: 311 NGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNND 370
Y L+D K G + A +ML + I V FN++I + +
Sbjct: 464 -------------YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Query: 371 QLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYR 430
+ E + + M PD T+ ++ + ++ A F++M + LEPD ++Y
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570
Query: 431 TLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLA 490
TL+ A+ +L M + D + + + + +E + +F +
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL-IE 629
Query: 491 GDMSSE--GYSANIDGYGERGHVLEAERAFICCQEGKKLT-----VLVFNVMVKAYGMGR 543
G M + Y+ I GY + EAER F E K+T + +++
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIF----ELLKVTPFGPNTVTLTILIHVLCKNN 685
Query: 544 NYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYC 603
+ D A +F M G+ P+ +Y L+ + + + + +MQE G+ + Y
Sbjct: 686 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 745
Query: 604 AVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESA 663
+I K G+++ A ++ I + PDVV Y +LI + VG + +A ++ M
Sbjct: 746 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 805
Query: 664 GLPPNAVIYNSL 675
G+ P+ ++ +L
Sbjct: 806 GVKPDDLLQRAL 817
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 181/419 (43%), Gaps = 39/419 (9%)
Query: 405 DKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQ 464
D+I +ASR + + P++V++ TL+ + R + A +L M+ G+E D
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 465 SALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEG 524
S L Y +AGML GH L ++ +G
Sbjct: 325 STLIDGYFKAGMLGM-----------------------------GHKLFSQAL----HKG 351
Query: 525 KKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAK 584
KL V+VF+ + Y + A ++ M G P+ +Y LI+ L + A
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 585 RYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAF 644
++ + G+ + Y ++I + K G L +Y+DMI+ PDVV+YGVL++
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 645 ADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDV 704
+ G + A + M + N V++NSLI + ++ EA + ++L+ PDV
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Query: 705 YTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQ 763
T ++ + + +A +F M K G + + Y ++ + ++ + ++
Sbjct: 532 ATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDL 591
Query: 764 MRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCG 822
M+ + + +D+ N V+ L R +D F +++ ++PD T+ + M CG
Sbjct: 592 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT-----MICG 645
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 194/488 (39%), Gaps = 94/488 (19%)
Query: 184 FKRQECHEL--NVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSK 241
+KR C + NV+ Y I+++ L + + ++ ++ +G+ P TY +LID K
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 242 GGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGED 301
G E M + G PD V G++V K G A F K +S+R
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG-QSIR---- 493
Query: 302 TKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNT 361
L+ +N+LID + + + EA + F M GI P TF T
Sbjct: 494 -----------------LNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT 536
Query: 362 MIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTY--------------------------- 394
++ + +L E L +M ++ PD Y
Sbjct: 537 VMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK 596
Query: 395 --------NILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAE 446
N++I L K +I AS++F + E +EPDIV+Y T++ Y R + EAE
Sbjct: 597 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 656
Query: 447 ELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYG 506
+ L++ + + +T + I +L K + ++DG
Sbjct: 657 RIFEL-----LKVTPFGPNTVT-LTILIHVLCK-------------------NNDMDG-- 689
Query: 507 ERGHVLEAERAF-ICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKC 565
A R F I ++G K + + ++ + + + + LF+ M G P
Sbjct: 690 -------AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 742
Query: 566 SYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDM 625
SY+ +I L A + +A L+ D + Y +I Y K+G+L A +Y+ M
Sbjct: 743 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 802
Query: 626 IRFNVEPD 633
+R V+PD
Sbjct: 803 LRNGVKPD 810
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 107/235 (45%), Gaps = 6/235 (2%)
Query: 592 EAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVK 651
G+VS C + + + Q+E+A + ++ P+VV + LIN F G +
Sbjct: 249 RVGIVS-----CNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303
Query: 652 QAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMI 711
+A F ME G+ P+ + Y++LI Y K G L + + DV + I
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 712 DLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLI 770
D+Y + + A +++ M +G N TY +++ ++GR EA + Q+ + G+
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 771 SDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCGLEL 825
+++Y++++ + G + ++DM+ PD + L L K GL L
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 130/326 (39%), Gaps = 48/326 (14%)
Query: 191 ELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVC 250
LNV+ +N ++ + ++ ++ M + GI P +T+ T++ V G EEA+
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALF 552
Query: 251 WLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIG--- 307
RM + G+EPD + ++ + K + + F + +I
Sbjct: 553 LFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF 612
Query: 308 ---KVENGSHVNGSL-------SSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTV 357
++E+ S +L TYNT+I Y +L EA F + P TV
Sbjct: 613 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTV 672
Query: 358 TFNTMIHIY-GNNDQ---------LAEVDS-------------------------LIKKM 382
T +IH+ NND +AE S L ++M
Sbjct: 673 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Query: 383 EELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMV 442
+E P +Y+I+I K ++ A+ F + +A L PD+V+Y L+ Y +
Sbjct: 733 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
Query: 443 CEAEELISEMDGGGLEIDEYTQSALT 468
EA L M G++ D+ Q AL+
Sbjct: 793 VEAALLYEHMLRNGVKPDDLLQRALS 818
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 130/302 (43%), Gaps = 13/302 (4%)
Query: 539 YGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGL-VS 597
YGM DKA +F T G V + S ++ L G+D + + K+ G+ S
Sbjct: 159 YGM---VDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPS 215
Query: 598 DCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYF 657
+ V+ + G++ A + ++ ++ +V ++ + V ++ A
Sbjct: 216 GVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLL 274
Query: 658 DAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSER 717
+ G PN V + +LI + K G + A + +K++ PD+ + +ID Y +
Sbjct: 275 SLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 718 SMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSY 776
M+ ++F KG + ++ + +Y ++G A+ + K+M G+ ++++Y
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 777 NNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCGLELTRKKNAQSGLQ 836
++ DGR + G + ++ ++P T+ SL KCG N +SG
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG-------NLRSGFA 447
Query: 837 AW 838
+
Sbjct: 448 LY 449
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 152/699 (21%), Positives = 294/699 (42%), Gaps = 56/699 (8%)
Query: 162 KERSIILKEQSSWERALEIFEWFKRQECHE-------LNVIHYNIMLRTLGKARKWSYVQ 214
K R +++K S AL + + ++ E L + YN +L +L + ++
Sbjct: 144 KIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMK 203
Query: 215 SLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMY 274
++ EM + P TY +++ K G EEA ++ ++ E G++PD T ++ Y
Sbjct: 204 QVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGY 263
Query: 275 KKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKA 334
+ + A + F + + R+ Y LI A
Sbjct: 264 CQRKDLDSAFKVFNEMPLKGCRRN----------------------EVAYTHLIHGLCVA 301
Query: 335 GQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTY 394
++ EA + F +M + PT T+ +I +++ +E +L+K+MEE P+ TY
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 395 NILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDG 454
+LI K A +M E L P++++Y L+ Y R M+ +A +++ M+
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 455 GGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEA 514
L + T + L + Y ++ + + + + Y++ IDG G+ A
Sbjct: 422 RKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 515 ERAF-ICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQI 573
R + G + M+ + + ++AC+LFDS+ G P+ Y +LI
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 574 LAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPD 633
A A L KM + + + + A+I G+L+ A + + M++ ++P
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 634 VVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYK 693
V +LI+ G+ A S F M S+G P+A Y + I+ Y + G L +A++
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 694 LLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMML--IMYKR 750
+R SPD++T + +I Y + A ++ + M+ G + ++ T+ ++ ++ +
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK 721
Query: 751 NGR----------------FEEATRIAKQMRESGLISDLLSYNN-VLGLYAVDGRFKDVI 793
G+ F+ + ++M E + + SY +LG+ V G +
Sbjct: 722 YGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV-GNLRVAE 780
Query: 794 GTFKDMV-NAAIQPDDFTFKSLGAVLMKCGLELTRKKNA 831
F M N I P + F + L+ C +L + A
Sbjct: 781 KVFDHMQRNEGISPSELVFNA----LLSCCCKLKKHNEA 815
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/610 (22%), Positives = 261/610 (42%), Gaps = 36/610 (5%)
Query: 173 SWERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTY 232
+W+ + FE + E + +M++ G+ + ++ M +GI P + Y
Sbjct: 293 NWQAVISAFEKISKPSRTE-----FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIY 347
Query: 233 GTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSS 292
+LI + G +EA+ + +M E G+E VT ++V + KAG + A+ +F
Sbjct: 348 TSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF----- 402
Query: 293 RESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGI 352
+ ++ +L++ Y +I + + ++ A +M EGI
Sbjct: 403 -----------------DEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGI 445
Query: 353 VPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASR 412
++TM+ Y + + K+++E P TY LI L+ K KIS A
Sbjct: 446 DAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALE 505
Query: 413 YFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYI 472
MKE ++ ++ +Y ++ + + A + +M G++ D + + +
Sbjct: 506 VSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFC 565
Query: 473 EAGMLEKSWLWFRRFH-LAGDMSSEGYSANIDGYGERGHVLEAERAFICCQE-GKKLTVL 530
G ++++ + L ++ + I GY + G + + F + G TV
Sbjct: 566 GMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVH 625
Query: 531 VFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKM 590
FN ++ R +KA + D MT G ++ +Y ++Q A A Y ++
Sbjct: 626 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 685
Query: 591 QEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNV 650
Q GL D Y A++ + K G+++ A V K+M N+ + VY +LI+ +A G+V
Sbjct: 686 QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 745
Query: 651 KQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCM 710
+A M+ G+ P+ Y S I +K G + A +T + + +L P++ T +
Sbjct: 746 WEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTL 805
Query: 711 IDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEA------TRIAKQ 763
I ++ S+ +A +E MK G ++ Y +L EA I K+
Sbjct: 806 IKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKE 865
Query: 764 MRESGLISDL 773
M E+GLI D+
Sbjct: 866 MVEAGLIVDM 875
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/535 (22%), Positives = 236/535 (44%), Gaps = 20/535 (3%)
Query: 292 SRESLRHGEDTKTMIGKVENGSHVNGSLSSYT---------YNTLIDTYGKAGQLKEASE 342
SR+SL+ DT NG + +S++ + ++ YG+ G + A E
Sbjct: 279 SRKSLQRILDT--------NGDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARE 330
Query: 343 TFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHA 402
TF +M GI PT+ + ++IH Y + E S ++KM+E TY++++ +
Sbjct: 331 TFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFS 390
Query: 403 KNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEY 462
K A +F + K + + Y ++YA+ + AE L+ EM+ G++
Sbjct: 391 KAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIA 450
Query: 463 TQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE-GYSANIDGYGERGHVLEA-ERAFIC 520
+ Y +K + F+R G + Y I+ Y + G + +A E + +
Sbjct: 451 IYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVM 510
Query: 521 CQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLP 580
+EG K + +++M+ + +++ A +F+ M G PD YN++I G
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570
Query: 581 HMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVL 640
A + +++MQ+ + +I Y K G + + EV+ M R P V + L
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 630
Query: 641 INAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEA 700
IN + +++A D M AG+ N Y +++ Y VG +A E + L++
Sbjct: 631 INGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL 690
Query: 701 SPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATR 759
D++T ++ + ++ A + + M + N F Y +++ + R G EA
Sbjct: 691 DVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAAD 750
Query: 760 IAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSL 814
+ +QM++ G+ D+ +Y + + + G T ++M ++P+ T+ +L
Sbjct: 751 LIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTL 805
Score = 142 bits (359), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 123/505 (24%), Positives = 218/505 (43%), Gaps = 27/505 (5%)
Query: 368 NNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIV 427
N D V S +K+ + P + +++ + + + A F +M+ + P
Sbjct: 290 NGDNWQAVISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSR 345
Query: 428 SYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWF--- 484
Y +L++AY++ R + EA + +M G+E+ T S + + +AG E + WF
Sbjct: 346 IYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEA 405
Query: 485 RRFHLAGDMSSEG---YSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGM 541
+R H + S G Y+ ER L E +EG + +++ M+ Y M
Sbjct: 406 KRIHKTLNASIYGKIIYAHCQTCNMERAEALVREME----EEGIDAPIAIYHTMMDGYTM 461
Query: 542 GRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIP 601
+ K +F + G P +Y LI + A R M+E G+ +
Sbjct: 462 VADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 521
Query: 602 YCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAME 661
Y +I+ ++KL A V++DM++ ++PDV++Y +I+AF +GN+ +A M+
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 662 SAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVR 721
P + +I Y K G ++ + E + ++R P V+T N +I+ E+ +
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQME 641
Query: 722 QAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVL 780
+A EI + M G ANE TY ++ Y G +A +++ GL D+ +Y +L
Sbjct: 642 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 701
Query: 781 GLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSL-------GAVLMKCGLELTRKKNAQS 833
GR + + K+M I + F + L G V L KK
Sbjct: 702 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKE--- 758
Query: 834 GLQAWMSTLSSVIEECDD--DYNNA 856
G++ + T +S I C D N A
Sbjct: 759 GVKPDIHTYTSFISACSKAGDMNRA 783
>sp|Q9LKU8|PP401_ARATH Pentatricopeptide repeat-containing protein At5g28460
OS=Arabidopsis thaliana GN=At5g28460 PE=2 SV=1
Length = 766
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 198/428 (46%), Gaps = 55/428 (12%)
Query: 254 RMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGS 313
+M+E + PD VT+GI++ K+ +A E F++ + + ++G+
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGK--------------RTDDGN 364
Query: 314 HVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQM-LREGIVPTTVTFNTMIHIYGNNDQL 372
+ S +NTLID K G+LKEA E +M L E VP VT+N +I Y +L
Sbjct: 365 VIKAD--SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKL 422
Query: 373 AEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTL 432
++ +M+E P+ T N ++ ++ ++MA +F M++ ++ ++V+Y TL
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 433 LYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAG- 491
++A C + EK+ W+ + AG
Sbjct: 483 IHA------CCSVSNV-----------------------------EKAMYWYEKMLEAGC 507
Query: 492 DMSSEGYSANIDGYGERGHVLEAERAFICCQEGK-KLTVLVFNVMVKAYGMGRNYDKACN 550
++ Y A I G + +A R +EG L +L +N+++ + N +K
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYE 567
Query: 551 LFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYM 610
+ M G PD +YN+LI +R + +M+E GL Y AVI +Y
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 611 KLGQLEMAEEVYKDM-IRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNA 669
+G+L+ A +++KDM + V P+ V+Y +LINAF+ +GN QA S + M+ + PN
Sbjct: 628 SVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNV 687
Query: 670 VIYNSLIK 677
YN+L K
Sbjct: 688 ETYNALFK 695
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 146/610 (23%), Positives = 249/610 (40%), Gaps = 53/610 (8%)
Query: 150 EALKPWAENLSNKERSIILKEQSSWERA----------LEIFEWFKRQECHELNVIHYNI 199
E L +++L +E S+ L QS E A L ++E K + L ++ +
Sbjct: 99 EYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLLRLYEIAKEKNI-PLTIVATKL 157
Query: 200 MLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERM--NE 257
++R G R QS+ + + + ++DV + GL ++A L+ M E
Sbjct: 158 LIRWFG--RMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKE 215
Query: 258 GGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVNG 317
P+ +T IV+ + W +E L E +I + SH
Sbjct: 216 SVFPPNRITADIVLH---------------EVW--KERLLTEEKIIALISRF--SSH-GV 255
Query: 318 SLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDS 377
S +S I + K + A + + +++ FN ++ G N ++ ++
Sbjct: 256 SPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMND 315
Query: 378 LIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMK-----EAN-LEPDIVSYRT 431
L+ KM+E+ PD T ILI K+ ++ A F +M+ + N ++ D + + T
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNT 375
Query: 432 LLYAYSIRRMVCEAEELISEMDGGGLE----IDEYTQSALTRMYIEAGMLEKSWLWFRRF 487
L+ + EAEEL+ M LE + T + L Y AG LE + R
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMK---LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 488 HLAGDMSSEGYSAN-IDGYGERGHVLEAERAFICC--QEGKKLTVLVFNVMVKAYGMGRN 544
++ + N I G R H L F +EG K V+ + ++ A N
Sbjct: 433 K-EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 545 YDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCA 604
+KA ++ M G PD Y +LI L H A R + K++E G D + Y
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 605 VISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAG 664
+I + E E+ DM + +PD + Y LI+ F + + + + M G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 665 LPPNAVIYNSLIKLYTKVGYLKEAQETYKLL-RSLEASPDVYTSNCMIDLYSERSMVRQA 723
L P Y ++I Y VG L EA + +K + + +P+ N +I+ +S+ QA
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 724 EEIFEIMKKK 733
+ E MK K
Sbjct: 672 LSLKEEMKMK 681
Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/478 (22%), Positives = 192/478 (40%), Gaps = 71/478 (14%)
Query: 351 GIVPTTVTFNTMIHIYGNNDQLAE----VDSLIKKMEELHCPPDTRTYNILIFLHAKNDK 406
G+ P +V I N + + L+K L PP +N L+ +N
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPP----FNALLSCLGRNMD 309
Query: 407 ISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSA 466
IS + KM E + PD+V+ L+ R V EA E+ +M G +
Sbjct: 310 ISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTD-------- 361
Query: 467 LTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKK 526
+ +++ + F IDG + G + EAE + +
Sbjct: 362 ------DGNVIKADSIHFNTL--------------IDGLCKVGRLKEAEELLVRMK---- 397
Query: 527 LTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRY 586
++ C VP+ +YN LI A AK
Sbjct: 398 ------------------LEERC-----------VPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 587 LRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFAD 646
+ +M+E + + + ++ + L MA + DM + V+ +VV Y LI+A
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 647 VGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYT 706
V NV++A +++ M AG P+A IY +LI +V +A + L+ S D+
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 707 SNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMR 765
N +I L+ +++ + E+ M+K+G + TY ++ + ++ FE R+ +QMR
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 766 ESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDM-VNAAIQPDDFTFKSLGAVLMKCG 822
E GL + +Y V+ Y G + + FKDM +++ + P+ + L K G
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/441 (20%), Positives = 176/441 (39%), Gaps = 39/441 (8%)
Query: 175 ERALEIFEWFKRQECHELNVI-----HYNIMLRTLGKARKWSYVQSLWDEMSVK-GIVPI 228
+ ALE+FE + + + NVI H+N ++ L K + + L M ++ VP
Sbjct: 346 DEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPN 405
Query: 229 NSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFK 288
TY LID + G E A + RM E ++P+ VT+ +V + A FF
Sbjct: 406 AVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFM 465
Query: 289 KWSSRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQML 348
+ G V G++ TY TLI +++A + +ML
Sbjct: 466 DME-----KEG---------------VKGNV--VTYMTLIHACCSVSNVEKAMYWYEKML 503
Query: 349 REGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKIS 408
G P + +I + + +++K++E D YN+LI L +
Sbjct: 504 EAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAE 563
Query: 409 MASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALT 468
M++ +PD ++Y TL+ + + E ++ +M GL+ T A+
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 469 RMYIEAGMLEKSWLWFRRFHLAGDMSSEG--YSANIDGYGERGHVLEAERAFICCQEGKK 526
Y G L+++ F+ L ++ Y+ I+ + + G+ +A + +E K
Sbjct: 624 DAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA----LSLKEEMK 679
Query: 527 LTVL-----VFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPH 581
+ ++ +N + K + L D M P++ + L++ L+G+D
Sbjct: 680 MKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELV 739
Query: 582 MAKRYLRKMQEAGLVSDCIPY 602
+++++ A P+
Sbjct: 740 KLRKFMQGYSVASPTEKASPF 760
>sp|Q9M316|PP292_ARATH Pentatricopeptide repeat-containing protein At3g61520,
mitochondrial OS=Arabidopsis thaliana GN=At3g61520 PE=2
SV=1
Length = 766
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 197/428 (46%), Gaps = 55/428 (12%)
Query: 254 RMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGS 313
+M+E + PD VT+GI++ K+ +A E F+K + + ++G+
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGK--------------RTDDGN 364
Query: 314 HVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQM-LREGIVPTTVTFNTMIHIYGNNDQL 372
+ S +NTLID K G+LKEA E +M L E P VT+N +I Y +L
Sbjct: 365 VIKAD--SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKL 422
Query: 373 AEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTL 432
++ +M+E P+ T N ++ ++ ++MA +F M++ ++ ++V+Y TL
Sbjct: 423 ETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTL 482
Query: 433 LYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAG- 491
++A C + EK+ W+ + AG
Sbjct: 483 IHA------CCSVSNV-----------------------------EKAMYWYEKMLEAGC 507
Query: 492 DMSSEGYSANIDGYGERGHVLEAERAFICCQEGK-KLTVLVFNVMVKAYGMGRNYDKACN 550
++ Y A I G + +A R +EG L +L +N+++ + N +K
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYE 567
Query: 551 LFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYM 610
+ M G PD +YN+LI +R + +M+E GL Y AVI +Y
Sbjct: 568 MLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC 627
Query: 611 KLGQLEMAEEVYKDM-IRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNA 669
+G+L+ A +++KDM + V P+ V+Y +LINAF+ +GN QA S + M+ + PN
Sbjct: 628 SVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNV 687
Query: 670 VIYNSLIK 677
YN+L K
Sbjct: 688 ETYNALFK 695
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 149/610 (24%), Positives = 249/610 (40%), Gaps = 53/610 (8%)
Query: 150 EALKPWAENLSNKERSIILKEQSSWERA----------LEIFEWFKRQECHELNVIHYNI 199
E L +++L +E S+ L QS E A L ++E K + L V+ N+
Sbjct: 99 EYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLLRLYEIAKEKNI-PLTVVATNL 157
Query: 200 MLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERM--NE 257
++R G R QS+ + + + ++DV + GL ++A L+ M E
Sbjct: 158 LIRWFG--RMGMVNQSVLVYERLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKE 215
Query: 258 GGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVNG 317
P+ +T IV+ + W R L E +I + SH
Sbjct: 216 SVFPPNRITADIVLH---------------EVWKGR--LLTEEKIIALISRF--SSH-GV 255
Query: 318 SLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDS 377
S +S I + K + A + + +++ FN ++ G N ++ ++
Sbjct: 256 SPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMND 315
Query: 378 LIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMK-----EAN-LEPDIVSYRT 431
L+ KM+E+ PD T ILI K+ ++ A F KM+ + N ++ D + + T
Sbjct: 316 LVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNT 375
Query: 432 LLYAYSIRRMVCEAEELISEMDGGGLE----IDEYTQSALTRMYIEAGMLEKSWLWFRRF 487
L+ + EAEEL+ M LE + T + L Y AG LE + R
Sbjct: 376 LIDGLCKVGRLKEAEELLVRMK---LEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 488 HLAGDMSSEGYSAN-IDGYGERGHVLEAERAFICC--QEGKKLTVLVFNVMVKAYGMGRN 544
++ + N I G R H L F +EG K V+ + ++ A N
Sbjct: 433 K-EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 545 YDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCA 604
+KA ++ M G PD Y +LI L H A R + K++E G D + Y
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 605 VISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAG 664
+I + E E+ DM + +PD + Y LI+ F + + + + M G
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 665 LPPNAVIYNSLIKLYTKVGYLKEAQETYKLL-RSLEASPDVYTSNCMIDLYSERSMVRQA 723
L P Y ++I Y VG L EA + +K + + +P+ N +I+ +S+ QA
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 724 EEIFEIMKKK 733
+ E MK K
Sbjct: 672 LSLKEEMKMK 681
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/481 (23%), Positives = 199/481 (41%), Gaps = 23/481 (4%)
Query: 351 GIVPTTVTFNTMIHIYGNNDQLAE----VDSLIKKMEELHCPPDTRTYNILIFLHAKNDK 406
G+ P +V I N + + L+K L PP +N L+ +N
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPP----FNALLSCLGRNMD 309
Query: 407 ISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEM------DGGGLEID 460
IS + KM E + PD+V+ L+ R V EA E+ +M DG ++ D
Sbjct: 310 ISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKAD 369
Query: 461 EYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSAN--IDGYGERGHVLEAERAF 518
+ L + G L+++ R L + + N IDGY G + A+
Sbjct: 370 SIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVV 429
Query: 519 ICCQEGK-KLTVLVFNVMVKAYGMGRNY--DKACNLFDSMTSHGAVPDKCSYNSLIQILA 575
+E + K V+ N +V GM R++ + A F M G + +Y +LI
Sbjct: 430 SRMKEDEIKPNVVTVNTIVG--GMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 576 GADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVV 635
A + KM EAG D Y A+IS ++ + A V + + D++
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL 547
Query: 636 VYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLL 695
Y +LI F D N ++ ME G P+++ YN+LI + K + + + +
Sbjct: 548 AYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 696 RSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIM--KKKGDANEFTYAMMLIMYKRNGR 753
R P V T +ID Y + +A ++F+ M K + N Y +++ + + G
Sbjct: 608 REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Query: 754 FEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKS 813
F +A + ++M+ + ++ +YN + + + ++ +MV + +P+ T +
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEI 727
Query: 814 L 814
L
Sbjct: 728 L 728
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/455 (20%), Positives = 178/455 (39%), Gaps = 67/455 (14%)
Query: 193 NVIHYNIMLRTLGKARKWSYVQSLWDEMSVK-----GIVPINST-YGTLID-VCSKGGLK 245
+V+ I++ TL K+R+ ++++M K ++ +S + TLID +C G LK
Sbjct: 328 DVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLK 387
Query: 246 EEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTM 305
E + E P+ VT ++ Y +AG+ + A+E + ++ E +
Sbjct: 388 EAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSR------MKEDEIKPNV 441
Query: 306 IGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHI 365
+ T NT++ + L A F M +EG+ VT+ T+IH
Sbjct: 442 V----------------TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 366 YGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPD 425
+ + + +KM E C PD + Y LI + + A R K+KE D
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD 545
Query: 426 IVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFR 485
+++Y L+ + + + E++++M+ G + D T + L + + E
Sbjct: 546 LLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 486 RFHLAG-DMSSEGYSANIDGYGERGHVLEAERAF--ICCQEGKKLTVLVFNVMVKAYGMG 542
+ G D + Y A ID Y G + EA + F + +++N+++ A+
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 543 RNYDKACNL-----------------------------------FDSMTSHGAVPDKCSY 567
N+ +A +L D M P++ +
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITM 725
Query: 568 NSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPY 602
L++ L+G+D +++++ A P+
Sbjct: 726 EILMERLSGSDELVKLRKFMQGYSVASPTEKASPF 760
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 21/207 (10%)
Query: 192 LNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCW 251
L+++ YN+++ V + +M +G P + TY TLI K E
Sbjct: 544 LDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERM 603
Query: 252 LERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVEN 311
+E+M E G++P T G V+ Y GE +A + FK +
Sbjct: 604 MEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFK---------------------DM 642
Query: 312 GSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQ 371
G H + ++ YN LI+ + K G +A +M + + P T+N + Q
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 372 LAEVDSLIKKMEELHCPPDTRTYNILI 398
+ L+ +M E C P+ T IL+
Sbjct: 703 GETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%)
Query: 175 ERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGT 234
+ AL++F+ N + YNI++ K + SL +EM +K + P TY
Sbjct: 633 DEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNA 692
Query: 235 LIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWS 291
L ++ E + ++ M E EP+++TM I+++ + E K +F + +S
Sbjct: 693 LFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYS 749
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 142/557 (25%), Positives = 259/557 (46%), Gaps = 41/557 (7%)
Query: 264 EVTMGIVVQMYKKAGEFQKAEEFFKKWSS-----RESLRHGEDTKTMIGKVENGSHVNGS 318
+V + + +Q +K AG+ + + + + E+ +GE +T I +V ++V S
Sbjct: 103 DVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRT-IQEVVRNTYV--S 159
Query: 319 LSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSL 378
+S + L+ G+A + +A F Q PT+ T+N++I + Q +V +
Sbjct: 160 VSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEV 219
Query: 379 IKKM-EELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYS 437
+M E C PDT TY+ LI + K + A R F +MK+ ++P Y TLL Y
Sbjct: 220 YTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYF 279
Query: 438 IRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEG 497
V +A +L EM G YT + L + +AG +++++ +++ DM +G
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYK------DMLRDG 333
Query: 498 YSANI-------DGYGERGHVLEAERAFI------CCQEGKKLTVLVFNVMVKAYGMGRN 544
+ ++ + G+ G V E F C TV+ +N ++KA +
Sbjct: 334 LTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTP-----TVVSYNTVIKALFESKA 388
Query: 545 Y-DKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYC 603
+ + + FD M + P + +Y+ LI + A L +M E G YC
Sbjct: 389 HVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYC 448
Query: 604 AVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESA 663
++I++ K + E A E++K++ VY V+I F G + +A F+ M++
Sbjct: 449 SLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 664 GLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEAS---PDVYTSNCMIDLYSERSMV 720
G P+ YN+L+ K G + EA LLR +E + D+ + N +++ ++ +
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANS---LLRKMEENGCRADINSHNIILNGFARTGVP 565
Query: 721 RQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNV 779
R+A E+FE +K G + TY +L + G FEEA R+ ++M++ G D ++Y+++
Sbjct: 566 RRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSI 625
Query: 780 LGLYAVDGRFKDVIGTF 796
L KD + +F
Sbjct: 626 LDAVGNVDHEKDDVSSF 642
Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 127/519 (24%), Positives = 222/519 (42%), Gaps = 58/519 (11%)
Query: 176 RALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKG-IVPINSTYGT 234
+AL +F K ++C + YN ++ L + + V ++ EM +G P TY
Sbjct: 180 KALSVFYQAKGRKCKPTSST-YNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSA 238
Query: 235 LIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRE 294
LI K G + A+ + M + M+P E ++ +Y K G+ +KA + F
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF------- 291
Query: 295 SLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVP 354
E S + YTY LI GKAG++ EA + MLR+G+ P
Sbjct: 292 ---------------EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTP 336
Query: 355 TTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILI-FLHAKNDKISMASRY 413
V N +++I G ++ E+ ++ +M C P +YN +I L +S S +
Sbjct: 337 DVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSW 396
Query: 414 FWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIE 473
F KMK ++ P +Y L+ Y V +A L+ EMD G +L +
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456
Query: 474 AGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFN 533
A +R+ A ++ E N R V+
Sbjct: 457 A----------KRYEAANELFKE-LKENFGNVSSR----------------------VYA 483
Query: 534 VMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEA 593
VM+K +G +A +LF+ M + G+ PD +YN+L+ + A + + A LRKM+E
Sbjct: 484 VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEEN 543
Query: 594 GLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQA 653
G +D + +++ + + G A E+++ + ++PD V Y L+ FA G ++A
Sbjct: 544 GCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEA 603
Query: 654 QSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETY 692
M+ G +A+ Y+S++ V + K+ ++
Sbjct: 604 ARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 112/506 (22%), Positives = 207/506 (40%), Gaps = 39/506 (7%)
Query: 323 TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTT-VTFNTMIHIYGNNDQLAEVDSLIKK 381
TY TLI +A E T +++R V + + ++ G +++ S+ +
Sbjct: 128 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQ 187
Query: 382 MEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKM-KEANLEPDIVSYRTLLYAYSIRR 440
+ C P + TYN +I + + + + +M E + PD ++Y L+ +Y
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG 247
Query: 441 MVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAG-DMSSEGYS 499
A L EM ++ E + L +Y + G +EK+ F AG + Y+
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYT 307
Query: 500 ANIDGYGERGHVLEAERAFI-CCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSH 558
I G G+ G V EA + ++G V+ N ++ G ++ N+F M
Sbjct: 308 ELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMW 367
Query: 559 GAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMA 618
P SYN++I+ L + VS+ +SS+
Sbjct: 368 RCTPTVVSYNTVIKAL---------------FESKAHVSE-------VSSW--------- 396
Query: 619 EEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKL 678
+ M +V P Y +LI+ + V++A + M+ G PP Y SLI
Sbjct: 397 ---FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINA 453
Query: 679 YTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGDANE 738
K + A E +K L+ + MI + + + +A ++F MK +G +
Sbjct: 454 LGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPD 513
Query: 739 -FTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFK 797
+ Y ++ + G EA + ++M E+G +D+ S+N +L +A G + I F+
Sbjct: 514 VYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFE 573
Query: 798 DMVNAAIQPDDFTFKSLGAVLMKCGL 823
+ ++ I+PD T+ +L G+
Sbjct: 574 TIKHSGIKPDGVTYNTLLGCFAHAGM 599
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 19/253 (7%)
Query: 607 SSYMKLGQLEMAEEVYKDMIR----------FNVEPDVVVYGVLINAFADVGNVKQAQSY 656
S+YM L + +Y +M R +V P V+ L+ A V +A S
Sbjct: 127 STYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVL--SELVKALGRAKMVSKALSV 184
Query: 657 FDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETY-KLLRSLEASPDVYTSNCMIDLYS 715
F + P + YNS+I + + G ++ E Y ++ + PD T + +I Y
Sbjct: 185 FYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYE 244
Query: 716 ERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLL 774
+ A +F+ MK E Y +L +Y + G+ E+A + ++M+ +G +
Sbjct: 245 KLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVY 304
Query: 775 SYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCGL--ELTRKKNAQ 832
+Y ++ GR + G +KDM+ + PD +L +L K G ELT N
Sbjct: 305 TYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELT---NVF 361
Query: 833 SGLQAWMSTLSSV 845
S + W T + V
Sbjct: 362 SEMGMWRCTPTVV 374
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 221/490 (45%), Gaps = 51/490 (10%)
Query: 320 SSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLI 379
S T N+L++ + ++ EA QM+ G P TVTF T++H +++ +E +L+
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 380 KKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIR 439
++M C PD TY +I K + +A KM++ +E D+V Y T++
Sbjct: 204 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKY 263
Query: 440 RMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEG-- 497
+ + +A +L ++M+ G++ D +T + L G W L DM +
Sbjct: 264 KHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR------WSDASRLLSDMLEKNIN 317
Query: 498 -----YSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLF 552
++A ID + + G ++EAE+ +++ MVK+ K C
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEK--------------LYDEMVKS--------KHC--- 352
Query: 553 DSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKL 612
PD +YN+LI+ R+M + GLV + + Y +I + +
Sbjct: 353 --------FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 613 GQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIY 672
+ A+ V+K M+ V PD++ Y +L++ + GNV+ A F+ M+ + + V Y
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 673 NSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKK 732
++I+ K G +++ + + L P+V T M+ + + + +A+ +F MK+
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 733 KGD-ANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKD 791
G N TY ++ R+G + + K+MR G D ++ V + DGR
Sbjct: 525 DGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLH-DGRLDK 583
Query: 792 VIGTFKDMVN 801
+F DM++
Sbjct: 584 ---SFLDMLS 590
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 121/485 (24%), Positives = 219/485 (45%), Gaps = 8/485 (1%)
Query: 336 QLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYN 395
+L +A F M++ P+ V F+ ++ ++ V SL ++M+ L + TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 396 ILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGG 455
I I + ++S+A KM + P IV+ +LL + + EA L+ +M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 456 GLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAG---DMSSEGYSANIDGYGERGHVL 512
G + D T + L + ++ R + G D+ + Y A I+G +RG
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT--YGAVINGLCKRGEPD 232
Query: 513 EAERAFICCQEGK-KLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLI 571
A ++GK + V+++N ++ ++ D A +LF+ M + G PD +YN LI
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 572 QILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRF-NV 630
L A R L M E + D + + A+I +++K G+L AE++Y +M++ +
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352
Query: 631 EPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQE 690
PDVV Y LI F V++ F M GL N V Y +LI + + AQ
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412
Query: 691 TYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYK 749
+K + S PD+ T N ++D V A +FE M+K+ + TY M+
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 750 RNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDF 809
+ G+ E+ + + G+ ++++Y ++ + G ++ F +M P+
Sbjct: 473 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSG 532
Query: 810 TFKSL 814
T+ +L
Sbjct: 533 TYNTL 537
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 196/463 (42%), Gaps = 37/463 (7%)
Query: 193 NVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWL 252
+++ N +L + S +L D+M G P T+ TL+ + EAV +
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 253 ERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENG 312
ERM G +PD VT G V+ K GE A K GK+E
Sbjct: 204 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK--------------GKIEAD 249
Query: 313 SHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQL 372
+ YNT+ID K + +A + F +M +GI P T+N +I N +
Sbjct: 250 VVI--------YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 373 AEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKM-KEANLEPDIVSYRT 431
++ L+ M E + PD +N LI K K+ A + + +M K + PD+V+Y T
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 432 LLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAG 491
L+ + + V E E+ EM GL + T + L + +A + + + F++
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ----- 416
Query: 492 DMSSEG-------YSANIDGYGERGHVLEAERAFICCQE-GKKLTVLVFNVMVKAYGMGR 543
M S+G Y+ +DG G+V A F Q+ KL ++ + M++A
Sbjct: 417 -MVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 544 NYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYC 603
+ +LF S++ G P+ +Y +++ L A +M+E G + + Y
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYN 535
Query: 604 AVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFAD 646
+I + ++ G + E+ K+M D +G++ N D
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHD 578
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 132/307 (42%), Gaps = 21/307 (6%)
Query: 191 ELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVC 250
E +V+ YN ++ L K + L+++M KGI P TY LI G +A
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 251 WLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVE 310
L M E + PD V ++ + K G+ +AE+ + + +
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK---------------- 350
Query: 311 NGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNND 370
H + + YNTLI + K +++E E F +M + G+V TVT+ T+IH +
Sbjct: 351 ---HCFPDVVA--YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR 405
Query: 371 QLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYR 430
+ K+M PD TYNIL+ N + A F M++ +++ DIV+Y
Sbjct: 406 DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYT 465
Query: 431 TLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLA 490
T++ A V + +L + G++ + T + + + G+ E++ F
Sbjct: 466 TMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Query: 491 GDMSSEG 497
G + + G
Sbjct: 526 GPLPNSG 532
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 168 LKEQSSWERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVP 227
L + E AL +FE+ ++++ +L+++ Y M+ L KA K L+ +S+KG+ P
Sbjct: 436 LCNNGNVETALVVFEYMQKRD-MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKP 494
Query: 228 INSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFF 287
TY T++ + GLKEEA M E G P+ T +++ + G+ + E
Sbjct: 495 NVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELI 554
Query: 288 KKWSS 292
K+ S
Sbjct: 555 KEMRS 559
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 212/527 (40%), Gaps = 85/527 (16%)
Query: 175 ERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGT 234
+ AL + + C +VI Y ++ +L K + + L +EM + G VP T+
Sbjct: 234 DSALSLLRDMTKHGCVPNSVI-YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 235 LIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRE 294
+I K EA + RM G PD++T G ++ K G A++ F + E
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 295 SLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLRE-GIV 353
+ +NTLI + G+L +A + M+ GIV
Sbjct: 353 IV--------------------------IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 354 PTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRY 413
P T+N++I+ Y + ++ M C P+ +Y IL+ K KI A
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 414 FWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIE 473
+M L+P+ V + L+ A+ + EA E+ EM G + D YT ++L E
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 474 AGMLEKSWLWFRRFHLAGDMSSEGYSAN-------IDGYGERGHVLEA-----ERAFICC 521
+ K LW R DM SEG AN I+ + RG + EA E F
Sbjct: 507 VDEI-KHALWLLR-----DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF--- 557
Query: 522 QEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPH 581
+G L + +N ++K DKA +LF+ M G P S N LI L
Sbjct: 558 -QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC------ 610
Query: 582 MAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLI 641
+ G +E A E K+M+ PD+V + LI
Sbjct: 611 -----------------------------RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 642 NAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEA 688
N G ++ + F +++ G+PP+ V +N+L+ K G++ +A
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 158/725 (21%), Positives = 308/725 (42%), Gaps = 45/725 (6%)
Query: 106 RRTDVISAVCVNGEVQTKCSTKWARYGGCIPSMLQALDTVKDLDEALKPW-AENLSNKER 164
RR+ + +C + ++ S GG + D+ + ++ LKP+ ++L N
Sbjct: 15 RRSQSLQRICYYASLSSRFSGGGGDDGGGSSPEIGGTDSANEWEKLLKPFDLDSLRNSFH 74
Query: 165 SI-------ILKEQSSWERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLW 217
I +L+ + ++E+F W Q + + Y +++ LG ++ + L
Sbjct: 75 KITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLL 134
Query: 218 DEMSVKGIVPINSTYGTLIDVCSKGGLKEEAV-CWLERMNEGGMEPDEVTMGIVVQMYKK 276
+M +GIV S + +++ K G + LE N EP + +V+++
Sbjct: 135 IQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVS 194
Query: 277 AGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQ 336
+ A F SR+ + +L +T+ ++ + +
Sbjct: 195 GNCHKVAANVFYDMLSRK--------------------IPPTL--FTFGVVMKAFCAVNE 232
Query: 337 LKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNI 396
+ A M + G VP +V + T+IH +++ E L+++M + C PD T+N
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 397 LIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGG 456
+I K D+I+ A++ +M PD ++Y L+ V A++L +
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 457 LEIDEYTQSALTRMYIEAGMLE--KSWL--WFRRFHLAGDMSSEGYSANIDGYGERGHV- 511
+ I + L ++ G L+ K+ L + + D+ + Y++ I GY + G V
Sbjct: 353 IVI----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT--YNSLIYGYWKEGLVG 406
Query: 512 LEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLI 571
L E +G K V + ++V + D+A N+ + M++ G P+ +N LI
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 572 QILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVE 631
A R+M G D + ++IS ++ +++ A + +DMI V
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 632 PDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQET 691
+ V Y LINAF G +K+A+ + M G P + + YNSLIK + G + +A+
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 692 Y-KLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGDANEF-TYAMMLIMYK 749
+ K+LR A P + N +I+ MV +A E + M +G + T+ ++
Sbjct: 587 FEKMLRDGHA-PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 645
Query: 750 RNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDF 809
R GR E+ + ++++ G+ D +++N ++ G D + + P+
Sbjct: 646 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHR 705
Query: 810 TFKSL 814
T+ L
Sbjct: 706 TWSIL 710
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 136/572 (23%), Positives = 237/572 (41%), Gaps = 84/572 (14%)
Query: 323 TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKM 382
+YN +++ K A+ F ML I PT TF ++ + +++ SL++ M
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 383 EELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMV 442
+ C P++ Y LI +K ++++ A + +M PD ++ ++ +
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 443 CEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANI 502
EA ++++ M G D+ T L + G ++ + F R
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI--------------- 348
Query: 503 DGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAY-GMGRNYDKACNLFDSMTSHGAV 561
K +++FN ++ + GR D L D +TS+G V
Sbjct: 349 ----------------------PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 562 PDKCSYNSLI-----QILAGADL------------PHM------------------AKRY 586
PD C+YNSLI + L G L P++ A
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 587 LRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFAD 646
L +M GL + + + +IS++ K ++ A E++++M R +PDV + LI+ +
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 647 VGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASP-DVY 705
V +K A M S G+ N V YN+LI + + G +KEA++ + + SP D
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM-VFQGSPLDEI 565
Query: 706 TSNCMIDLYSERSMVRQAEEIFEIMKKKGDANEFTYAMMLIM-YKRNGRFEEATRIAKQM 764
T N +I V +A +FE M + G A +LI R+G EEA K+M
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Query: 765 RESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCGLE 824
G D++++N+++ GR +D + F+ + I PD TF +L + L K G
Sbjct: 626 VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
Query: 825 ----LTRKKNAQSGL----QAWMSTLSSVIEE 848
L + + G + W L S+I +
Sbjct: 686 YDACLLLDEGIEDGFVPNHRTWSILLQSIIPQ 717
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 134/328 (40%), Gaps = 19/328 (5%)
Query: 177 ALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLI 236
ALE+ + + C NV Y I++ K K ++ +EMS G+ P + LI
Sbjct: 408 ALEVLHDMRNKGCKP-NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 237 DVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESL 296
K EAV M G +PD T ++ + E + A + S +
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 297 RHGEDTKTMIG------------KVENGSHVNGS-LSSYTYNTLIDTYGKAGQLKEASET 343
+ T+I K+ N GS L TYN+LI +AG++ +A
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 344 FAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAK 403
F +MLR+G P+ ++ N +I+ + + E K+M PD T+N LI +
Sbjct: 587 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646
Query: 404 NDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYT 463
+I F K++ + PD V++ TL+ V +A L+ E G + T
Sbjct: 647 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRT 706
Query: 464 QSALTRMYIEAGMLEKSWLWFRRFHLAG 491
S L + I L++ RRF+ A
Sbjct: 707 WSILLQSIIPQETLDR-----RRFYNAA 729
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 217/503 (43%), Gaps = 54/503 (10%)
Query: 300 EDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTF 359
ED M+ ++ + VN + TYNT++ K G+L + E M + G+VP VT+
Sbjct: 221 EDALGMLERMVSEFKVNPD--NVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTY 278
Query: 360 NTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKE 419
N +++ Y L E +++ M++ + PD TYNILI + MK
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338
Query: 420 ANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEK 479
L+PD+V+Y TL+ + EA +L+ +M+ G++ ++ T + + + EK
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKE---EK 395
Query: 480 SWLWFRRFHLAGDMSSEGYSANIDGY----------GERGHVLEAERAFICCQEGKKLTV 529
R+ DM G+S +I Y G+ LE R Q+G K+
Sbjct: 396 REAVTRKVKELVDM--HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM--GQKGIKMNT 451
Query: 530 LVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRK 589
+ N ++ A R D+A NL +S
Sbjct: 452 ITLNTILDALCKERKLDEAHNLLNSA---------------------------------- 477
Query: 590 MQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGN 649
+ G + D + Y +I + + ++E A E++ +M + + P V + LI G
Sbjct: 478 -HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGK 536
Query: 650 VKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNC 709
+ A FD + +GL P+ +NS+I Y K G +++A E Y PD YT N
Sbjct: 537 TELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNI 596
Query: 710 MIDLYSERSMVRQAEEIFEIMKKKGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGL 769
+++ + M +A F + ++ + + TY M+ + ++ + +EA + +M E GL
Sbjct: 597 LLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Query: 770 ISDLLSYNNVLGLYAVDGRFKDV 792
D +YN+ + L DG+ +
Sbjct: 657 EPDRFTYNSFISLLMEDGKLSET 679
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/492 (21%), Positives = 201/492 (40%), Gaps = 74/492 (15%)
Query: 364 HIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLE 423
+I ++ L+ +SL+ L PP ++I + + K +A + F KM L+
Sbjct: 104 YIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLK 163
Query: 424 PDIVSYRTLLYA---YSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKS 480
P++++ TLL Y + A E+ +M G+ ++ T + L Y G LE +
Sbjct: 164 PNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDA 223
Query: 481 WLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYG 540
R M SE + N D + +N ++KA
Sbjct: 224 LGMLER------MVSE-FKVNPDN-------------------------VTYNTILKAMS 251
Query: 541 M-GRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDC 599
GR D L D M +G VP++ +YN+L+ A + + M++ ++ D
Sbjct: 252 KKGRLSDLKELLLD-MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDL 310
Query: 600 IPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDA 659
Y +I+ G + E+ M ++PDVV Y LI+ ++G +A+ +
Sbjct: 311 CTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQ 370
Query: 660 MESAGL------------------------------------PPNAVIYNSLIKLYTKVG 683
ME+ G+ P+ V Y++LIK Y KVG
Sbjct: 371 MENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVG 430
Query: 684 YLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYA 742
L A E + + + T N ++D + + +A + K+G +E TY
Sbjct: 431 DLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYG 490
Query: 743 MMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNA 802
+++ + R + E+A + +M++ + + ++N+++G G+ + + F ++ +
Sbjct: 491 TLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAES 550
Query: 803 AIQPDDFTFKSL 814
+ PDD TF S+
Sbjct: 551 GLLPDDSTFNSI 562
Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 111/520 (21%), Positives = 218/520 (41%), Gaps = 47/520 (9%)
Query: 314 HVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMI---HIYGNND 370
H++ S ++ + Y G+ A + F +M+R + P +T NT++ Y ++
Sbjct: 124 HLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183
Query: 371 QLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKM-KEANLEPDIVSY 429
++ + M ++ + +T+N+L+ + K+ A +M E + PD V+Y
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243
Query: 430 RTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHL 489
T+L A S + + + +EL+ +M GL + T
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVT-------------------------- 277
Query: 490 AGDMSSEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVL----VFNVMVKAYGMGRNY 545
Y+ + GY + G + EA F + K+ VL +N+++ +
Sbjct: 278 --------YNNLVYGYCKLGSLKEA---FQIVELMKQTNVLPDLCTYNILINGLCNAGSM 326
Query: 546 DKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAV 605
+ L D+M S PD +YN+LI L A++ + +M+ G+ ++ + +
Sbjct: 327 REGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNIS 386
Query: 606 ISSYMKLGQLEMAEEVYKDMIRFN-VEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAG 664
+ K + E K+++ + PD+V Y LI A+ VG++ A M G
Sbjct: 387 LKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKG 446
Query: 665 LPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAE 724
+ N + N+++ K L EA D T +I + V +A
Sbjct: 447 IKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKAL 506
Query: 725 EIFEIMKK-KGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLY 783
E+++ MKK K T+ ++ +G+ E A ++ ESGL+ D ++N+++ Y
Sbjct: 507 EMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGY 566
Query: 784 AVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCGL 823
+GR + + + + + +PD++T L L K G+
Sbjct: 567 CKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 195 IHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLER 254
+ Y ++ + K +WDEM I P ST+ +LI G E A+ +
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 255 MNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSH 314
+ E G+ PD+ T ++ Y K G +KA EF+ ES++H K +N
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFY-----NESIKHS-------FKPDN--- 591
Query: 315 VNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAE 374
YT N L++ K G ++A F ++ E V TVT+NTMI + + +L E
Sbjct: 592 -------YTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKE 643
Query: 375 VDSLIKKMEELHCPPDTRTYNILIFLHAKNDKIS 408
L+ +MEE PD TYN I L ++ K+S
Sbjct: 644 AYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLS 677
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 133/295 (45%), Gaps = 23/295 (7%)
Query: 193 NVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWL 252
+++ Y+ +++ K S + EM KGI T T++D K +EA L
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 253 ERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENG 312
++ G DEVT G ++ + + + +KA E W + ++
Sbjct: 475 NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEM---WDEMKKVK--------------- 516
Query: 313 SHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQL 372
+ ++S T+N+LI G+ + A E F ++ G++P TFN++I Y ++
Sbjct: 517 --ITPTVS--TFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572
Query: 373 AEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTL 432
+ + + PD T NIL+ K A +F + E E D V+Y T+
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTM 631
Query: 433 LYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRF 487
+ A+ + + EA +L+SEM+ GLE D +T ++ + +E G L ++ ++F
Sbjct: 632 ISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 114/229 (49%), Gaps = 5/229 (2%)
Query: 606 ISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINA---FADVGNVKQAQSYFDAMES 662
+S+Y+ G+ +A ++++ MIR ++P+++ L+ + ++ A+ FD M
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVK 197
Query: 663 AGLPPNAVIYNSLIKLYTKVGYLKEAQETY-KLLRSLEASPDVYTSNCMIDLYSERSMVR 721
G+ N +N L+ Y G L++A +++ + +PD T N ++ S++ +
Sbjct: 198 IGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLS 257
Query: 722 QAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVL 780
+E+ MKK G N TY ++ Y + G +EA +I + M+++ ++ DL +YN ++
Sbjct: 258 DLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILI 317
Query: 781 GLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCGLELTRKK 829
G ++ + M + +QPD T+ +L + GL L +K
Sbjct: 318 NGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARK 366
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 176 RALEIFEWFKRQECHELNVIHY--NIMLRTLGKA----RKWSYVQSLWDEMSVKGIVPIN 229
R + FE++ H +Y NI+L L K + ++ +L +E V +
Sbjct: 571 RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTV---- 626
Query: 230 STYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKK 289
TY T+I K +EA L M E G+EPD T + + + G+ + +E KK
Sbjct: 627 -TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Query: 290 WSSR-ESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFA 345
+S + S++ +T + S + + Y+ +ID G+LKE S ++
Sbjct: 686 FSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSRSYT 742
>sp|Q9LER0|PP381_ARATH Pentatricopeptide repeat-containing protein At5g14770,
mitochondrial OS=Arabidopsis thaliana GN=At5g14770 PE=2
SV=2
Length = 940
Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 155/665 (23%), Positives = 285/665 (42%), Gaps = 52/665 (7%)
Query: 188 ECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEE 247
E ELN+I + I+L + ++ + +M + G P T+ ++I+ KGG E
Sbjct: 223 EISELNLITHTILLSSYYNLHA---IEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLE 279
Query: 248 AVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRE------------- 294
L M E + P+ VT +V KA ++ A + + R
Sbjct: 280 GGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMD 339
Query: 295 ------SLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQML 348
LR E T M+ +E+ N TY L+D KAG L A QML
Sbjct: 340 GLFKAGDLREAEKTFKML--LEDNQVPN----VVTYTALVDGLCKAGDLSSAEFIITQML 393
Query: 349 REGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKIS 408
+ ++P VT+++MI+ Y L E SL++KME+ + P+ TY +I K K
Sbjct: 394 EKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEE 453
Query: 409 MASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALT 468
MA +M+ +E + L+ + E + L+ +M G+ +D+ ++L
Sbjct: 454 MAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLI 513
Query: 469 RMYIEAG-----------MLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERA 517
++ + G M E+ W D+ S Y+ I G + G V A+ A
Sbjct: 514 DVFFKGGDEEAALAWAEEMQERGMPW--------DVVS--YNVLISGMLKFGKV-GADWA 562
Query: 518 FICCQE-GKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAG 576
+ +E G + + FN+M+ + + + L+D M S G P S N ++ +L
Sbjct: 563 YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCE 622
Query: 577 ADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVV 636
A L +M + + Y + + K + + + ++ ++ + ++ V
Sbjct: 623 NGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQV 682
Query: 637 YGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLR 696
Y LI +G K+A ME+ G P+ V +NSL+ Y ++++A TY ++
Sbjct: 683 YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM 742
Query: 697 SLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFE 755
SP+V T N +I S+ ++++ ++ MK +G ++FTY ++ + G +
Sbjct: 743 EAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMK 802
Query: 756 EATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLG 815
+ I +M GL+ +YN ++ +A G+ K+M + P+ T+ ++
Sbjct: 803 GSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMI 862
Query: 816 AVLMK 820
+ L K
Sbjct: 863 SGLCK 867
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 144/650 (22%), Positives = 289/650 (44%), Gaps = 33/650 (5%)
Query: 193 NVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINS-TYGTLIDVCSKGGLKEEAVCW 251
+V N+++ + K + S+ SL ++ I++ TY T+I + GL +EA +
Sbjct: 130 DVFALNVLIHSFCKVGRLSFAISLLRNR----VISIDTVTYNTVISGLCEHGLADEAYQF 185
Query: 252 LERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTM--IGKV 309
L M + G+ PD V+ ++ + K G F +A+ + S + H + + +
Sbjct: 186 LSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAI 245
Query: 310 ENGSHVNGSLSSY-----TYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIH 364
E ++ + +S + T++++I+ K G++ E +M + P VT+ T++
Sbjct: 246 EE-AYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVD 304
Query: 365 IYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEP 424
+ +L +M P D Y +L+ K + A + F + E N P
Sbjct: 305 SLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVP 364
Query: 425 DIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWF 484
++V+Y L+ + AE +I++M + + T S++ Y++ GMLE++
Sbjct: 365 NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLL 424
Query: 485 RRFHLAGDMSSEG--YSANIDGYGERGH-----VLEAERAFICCQEGKKLTVLVFNVMVK 537
R+ ++ G Y IDG + G L E I +E + + N + +
Sbjct: 425 RKME-DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKR 483
Query: 538 AYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVS 597
+GR + L M S G D+ +Y SLI + A + +MQE G+
Sbjct: 484 ---IGR-IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPW 539
Query: 598 DCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYF 657
D + Y +IS +K G++ A+ YK M +EPD+ + +++N+ G+ + +
Sbjct: 540 DVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLW 598
Query: 658 DAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSER 717
D M+S G+ P+ + N ++ + + G ++EA + +E P++ T +D S+
Sbjct: 599 DKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKH 658
Query: 718 SMVRQAEEIFE----IMKKKGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDL 773
++A+ IF+ ++ + Y ++ + G ++A + M G I D
Sbjct: 659 ---KRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDT 715
Query: 774 LSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCGL 823
+++N+++ Y V + + T+ M+ A I P+ T+ ++ L GL
Sbjct: 716 VTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGL 765
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 200/470 (42%), Gaps = 18/470 (3%)
Query: 324 YNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLI-KKM 382
++TL Y +L A+ T + M G+VP + +N++IH + N + + SLI KM
Sbjct: 63 FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKM 122
Query: 383 EELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMV 442
PD N+LI K ++S A ++ + D V+Y T++ +
Sbjct: 123 IACGVSPDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLA 179
Query: 443 CEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE----GY 498
EA + +SEM G+ D + + L + + G F R D SE +
Sbjct: 180 DEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGN-------FVRAKALVDEISELNLITH 232
Query: 499 SANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSH 558
+ + Y + EA R + G V+ F+ ++ G + L M
Sbjct: 233 TILLSSYYNLHAIEEAYRDMV--MSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEM 290
Query: 559 GAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMA 618
P+ +Y +L+ L A++ A +M G+ D + Y ++ K G L A
Sbjct: 291 SVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREA 350
Query: 619 EEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKL 678
E+ +K ++ N P+VV Y L++ G++ A+ M + PN V Y+S+I
Sbjct: 351 EKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMING 410
Query: 679 YTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DAN 737
Y K G L+EA + + P+ +T +ID + A E+ + M+ G + N
Sbjct: 411 YVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEEN 470
Query: 738 EFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDG 787
+ ++ KR GR +E + K M G+ D ++Y +++ ++ G
Sbjct: 471 NYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 520
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 185/445 (41%), Gaps = 53/445 (11%)
Query: 388 PPDTRTY----NILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVC 443
P TR Y + L L+ +++ A+R M + PD + +L++ +++ +V
Sbjct: 53 PIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVH 112
Query: 444 EAEELI-SEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANI 502
+ LI S+M G+ D + + L + + G L + R ++ D + Y+ I
Sbjct: 113 DQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVT--YNTVI 170
Query: 503 DGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVP 562
G E G D+A M G +P
Sbjct: 171 SGLCEHGLA----------------------------------DEAYQFLSEMVKMGILP 196
Query: 563 DKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVY 622
D SYN+LI AK + ++ E L++ I ++SSY L +E E Y
Sbjct: 197 DTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTI----LLSSYYNLHAIE---EAY 249
Query: 623 KDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKV 682
+DM+ +PDVV + +IN G V + ME + PN V Y +L+ K
Sbjct: 250 RDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKA 309
Query: 683 GYLKEAQETYK--LLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGDA-NEF 739
+ A Y ++R + VYT ++D + +R+AE+ F+++ + N
Sbjct: 310 NIYRHALALYSQMVVRGIPVDLVVYT--VLMDGLFKAGDLREAEKTFKMLLEDNQVPNVV 367
Query: 740 TYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDM 799
TY ++ + G A I QM E +I ++++Y++++ Y G ++ + + M
Sbjct: 368 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 427
Query: 800 VNAAIQPDDFTFKSLGAVLMKCGLE 824
+ + P+ FT+ ++ L K G E
Sbjct: 428 EDQNVVPNGFTYGTVIDGLFKAGKE 452
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 141/640 (22%), Positives = 269/640 (42%), Gaps = 110/640 (17%)
Query: 177 ALEIFEWFKRQE-CHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTL 235
A + W ++ C ++ Y+I++ LG++ K Y L + + + P+ TY L
Sbjct: 150 AYAVVSWLQKHNLCFSYELL-YSILIHALGRSEKL-YEAFLLSQK--QTLTPL--TYNAL 203
Query: 236 IDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRES 295
I C++ E+A+ + +M + G + D V +V+Q ++ +
Sbjct: 204 IGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKI--------------- 248
Query: 296 LRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPT 355
D+ ++ + L N +I + K+G +A + G+
Sbjct: 249 -----DSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAK 303
Query: 356 TVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFW 415
T T ++I ++ + E ++L F
Sbjct: 304 TATLVSIISALADSGRTLEAEAL-----------------------------------FE 328
Query: 416 KMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAG 475
+++++ ++P +Y LL Y + +AE ++SEM+ G+ DE+T S L Y+ AG
Sbjct: 329 ELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAG 388
Query: 476 MLEKSWLWFRRFHLAGDMSSEGY--SANIDGYGERGHVLEAERAFICCQEGKKLTV---- 529
E + + + AGD+ + S + G+ +RG E ++ F +E K + V
Sbjct: 389 RWESARIVLKEME-AGDVQPNSFVFSRLLAGFRDRG---EWQKTFQVLKEMKSIGVKPDR 444
Query: 530 LVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRK 589
+NV++ +G D A FD M S G PD+ ++N+LI
Sbjct: 445 QFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI------------------ 486
Query: 590 MQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGN 649
DC +C K G+ +AEE+++ M R P Y ++IN++ D
Sbjct: 487 --------DC--HC-------KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 529
Query: 650 VKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNC 709
+ M+S G+ PN V + +L+ +Y K G +A E + ++S+ P N
Sbjct: 530 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA 589
Query: 710 MIDLYSERSMVRQAEEIFEIMKKKGDANEFTYAMMLI-MYKRNGRFEEATRIAKQMRESG 768
+I+ Y++R + QA F +M G LI + + R EA + + M+E+G
Sbjct: 590 LINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG 649
Query: 769 LISDLLSYNNVL-GLYAVDGRFKDVIGTFKDMVNAAIQPD 807
+ D+++Y ++ L VD +F+ V +++M+ + +PD
Sbjct: 650 VKPDVVTYTTLMKALIRVD-KFQKVPVVYEEMIMSGCKPD 688
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 177/428 (41%), Gaps = 61/428 (14%)
Query: 156 AENLSNKERSI--ILKEQSSWERALEIFEWFK--RQECHELNVIHYNIMLRTLGKARKWS 211
A LS K ++ I+ + R LE F+ RQ + YN +L+ K
Sbjct: 297 ATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLK 356
Query: 212 YVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVV 271
+S+ EM +G+ P TY LID G E A L+ M G ++P+ ++
Sbjct: 357 DAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLL 416
Query: 272 QMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTY 331
++ GE+QK + K+ S IG + YN +IDT+
Sbjct: 417 AGFRDRGEWQKTFQVLKEMKS-------------IGVKPDRQF---------YNVVIDTF 454
Query: 332 GKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDT 391
GK L A TF +ML EGI P VT+NT+I + + + + + + ME C P
Sbjct: 455 GKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCA 514
Query: 392 RTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISE 451
TYNI+I + ++ R KMK + P++V++ TL+ Y +A E + E
Sbjct: 515 TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 574
Query: 452 MDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHV 511
M GL+ +AL I+ Y +RG
Sbjct: 575 MKSVGLKPSSTMYNAL----------------------------------INAYAQRGLS 600
Query: 512 LEAERAF-ICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSL 570
+A AF + +G K ++L N ++ A+G R +A + M +G PD +Y +L
Sbjct: 601 EQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTL 660
Query: 571 IQILAGAD 578
++ L D
Sbjct: 661 MKALIRVD 668
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/515 (23%), Positives = 222/515 (43%), Gaps = 61/515 (11%)
Query: 357 VTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWK 416
+ ++ +IH G +++L E L +K + P TYN LI A+N+ I A K
Sbjct: 168 LLYSILIHALGRSEKLYEAFLLSQK--QTLTP---LTYNALIGACARNNDIEKALNLIAK 222
Query: 417 MKEANLEPDIVSYRTLLYAYSIRRMVCEAE--ELISEMDGGGLEIDEYTQSALTRMYIEA 474
M++ + D V+Y ++ + + + L E++ LE+D + + + ++
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 475 GMLEKSWLWFRRFHLAGDMSSEGYSAN-------IDGYGERGHVLEAERAFICCQEGKKL 527
G K+ L G + G SA I + G LEAE
Sbjct: 283 GDPSKA------LQLLGMAQATGLSAKTATLVSIISALADSGRTLEAE------------ 324
Query: 528 TVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYL 587
LF+ + G P +YN+L++ A+ +
Sbjct: 325 ----------------------ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMV 362
Query: 588 RKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADV 647
+M++ G+ D Y +I +Y+ G+ E A V K+M +V+P+ V+ L+ F D
Sbjct: 363 SEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDR 422
Query: 648 GNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTS 707
G ++ M+S G+ P+ YN +I + K L A T+ + S PD T
Sbjct: 423 GEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTW 482
Query: 708 NCMIDLYSERSMVRQAEEIFEIMKKKGDAN-EFTYAMMLIMYKRNGRFEEATRIAKQMRE 766
N +ID + + AEE+FE M+++G TY +M+ Y R+++ R+ +M+
Sbjct: 483 NTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKS 542
Query: 767 SGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCGLELT 826
G++ +++++ ++ +Y GRF D I ++M + ++P + +L + GL
Sbjct: 543 QGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLS-E 601
Query: 827 RKKNA-----QSGLQAWMSTLSSVIEECDDDYNNA 856
+ NA GL+ + L+S+I +D +A
Sbjct: 602 QAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDA 636
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 23/221 (10%)
Query: 177 ALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLI 236
A E+FE +R+ C YNIM+ + G +W ++ L +M +GI+P T+ TL+
Sbjct: 498 AEEMFEAMERRGCLPCATT-YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLV 556
Query: 237 DVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESL 296
DV K G +A+ LE M G++P ++ Y + G ++A F+ +S + L
Sbjct: 557 DVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTS-DGL 615
Query: 297 RHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTT 356
+ S N+LI+ +G+ + EA M G+ P
Sbjct: 616 KP---------------------SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDV 654
Query: 357 VTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNIL 397
VT+ T++ D+ +V + ++M C PD + ++L
Sbjct: 655 VTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSML 695
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 194/417 (46%), Gaps = 41/417 (9%)
Query: 322 YTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKK 381
YT+N +I+ + Q+ A +ML+ G P VT ++++ + +++++ SL+ K
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 382 MEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRM 441
M E+ PD YN +I K +++ A +F +++ + P++V+Y L+
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 442 VCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSAN 501
+A L+S+M + T + +T YSA
Sbjct: 241 WSDAARLLSDMIK-----KKITPNVIT-----------------------------YSAL 266
Query: 502 IDGYGERGHVLEAERAFICCQEGKKLTV----LVFNVMVKAYGMGRNYDKACNLFDSMTS 557
+D + + G VLEA+ F +E ++++ + ++ ++ + D+A +FD M S
Sbjct: 267 LDAFVKNGKVLEAKELF---EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Query: 558 HGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEM 617
G + D SYN+LI A + R+M + GLVS+ + Y +I + + G ++
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 618 AEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIK 677
A+E + M F + PD+ Y +L+ D G +++A F+ M+ + + V Y ++I+
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 678 LYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG 734
K G ++EA + L PD+ T M+ + ++ + E ++ MK++G
Sbjct: 444 GMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 202/454 (44%), Gaps = 19/454 (4%)
Query: 403 KNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEY 462
++ K++ A F M ++ P IV + LL A + L +M+ G+ D Y
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 463 TQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSAN-------IDGYGERGHVLEAE 515
T + + + + + + G M GY + ++G+ R V +A
Sbjct: 122 TFNIVINCFCCCFQVSLA------LSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 516 RAFICCQE-GKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQIL 574
E G K ++ +N ++ + + + A + F + G P+ +Y +L+ L
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 575 AGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDV 634
+ A R L M + + + I Y A++ +++K G++ A+E++++M+R +++PD+
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 635 VVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKL 694
V Y LIN + +A FD M S G + V YN+LI + K +++ + ++
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 695 LRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGDANEF-TYAMMLIMYKRNGR 753
+ + T N +I + + V +A+E F M G + + TY ++L NG
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 754 FEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKS 813
E+A I + M++ + D+++Y V+ G+ ++ F + ++PD T+ +
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 814 LGAVLMKCGL----ELTRKKNAQSGLQAWMSTLS 843
+ + L GL E K Q GL TLS
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 196/456 (42%), Gaps = 62/456 (13%)
Query: 197 YNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERMN 256
+NI++ + S S+ +M G P T G+L++ + +AV +++M
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 257 EGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKT-MIGKVENGSHV 315
E G +PD V ++ K A +FFK+ R+ +R T T ++ + N S
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE-RKGIRPNVVTYTALVNGLCNSSRW 241
Query: 316 NGSL-------------SSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTM 362
+ + + TY+ L+D + K G++ EA E F +M+R I P VT++++
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 363 IHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANL 422
I+ +D++ E + + M C D +YN LI K ++ + F +M + L
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 423 EPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWL 482
+ V+Y TL+ + V +A+E S+MD G+ D +T + L + G LEK+ +
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 483 WFRRFHLAGDMSSEGYSANIDGYGE--RGHVLEAERAFICCQEGKKLTVLVFNVMVKAYG 540
F DM +I Y RG C+ GK
Sbjct: 422 IFE------DMQKREMDLDIVTYTTVIRGM----------CKTGK--------------- 450
Query: 541 MGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLV-SDC 599
++A +LF S++ G PD +Y +++ L L H + KM++ GL+ +DC
Sbjct: 451 ----VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 506
Query: 600 IPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVV 635
+ G + ++ E+ K M+ P ++
Sbjct: 507 T---------LSDGDITLSAELIKKMLSCGYAPSLL 533
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 140/314 (44%), Gaps = 15/314 (4%)
Query: 167 ILKEQSSWERALEIFEWFKRQECHEL--NVIHYNIMLRTLGKARKWSYVQSLWDEMSVKG 224
I+ +R + F++FK E + NV+ Y ++ L + +WS L +M K
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 225 IVPINSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAE 284
I P TY L+D K G EA E M ++PD VT ++ +A
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 285 EFFKKWSSRESLRHGEDTKTMIG------KVENGSHVNGSLS-------SYTYNTLIDTY 331
+ F S+ L T+I +VE+G + +S + TYNTLI +
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 332 GKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDT 391
+AG + +A E F+QM GI P T+N ++ +N +L + + + M++ D
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 435
Query: 392 RTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISE 451
TY +I K K+ A F + L+PDIV+Y T++ + ++ E E L ++
Sbjct: 436 VTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495
Query: 452 MDGGGLEIDEYTQS 465
M GL ++ T S
Sbjct: 496 MKQEGLMKNDCTLS 509
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 137/306 (44%), Gaps = 7/306 (2%)
Query: 548 ACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVIS 607
A +LF M P +N L+ + + +KM+ G+ +D + VI+
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 608 SYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPP 667
+ Q+ +A + M++ EPD V G L+N F V A S D M G P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 668 NAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIF 727
+ V YN++I K + +A + +K + P+V T +++ S A +
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 728 -EIMKKKGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVD 786
+++KKK N TY+ +L + +NG+ EA + ++M + D+++Y++++ +
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 787 GRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKC-----GLELTRKKNAQSGLQAWMST 841
R + F MV+ D ++ +L K G++L R+ +Q GL + T
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLVSNTVT 367
Query: 842 LSSVIE 847
+++I+
Sbjct: 368 YNTLIQ 373
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 145/320 (45%), Gaps = 13/320 (4%)
Query: 190 HELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAV 249
++ +++ YN ++ +L K ++ + + E+ KGI P TY L++ +A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 250 CWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKW---------SSRESLRHGE 300
L M + + P+ +T ++ + K G+ +A+E F++ + SL +G
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 301 DTKTMIGKVENGSHV---NGSLSS-YTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTT 356
I + + G L+ +YNTLI+ + KA ++++ + F +M + G+V T
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 357 VTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWK 416
VT+NT+I + + + +M+ PD TYNIL+ N ++ A F
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 417 MKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGM 476
M++ ++ DIV+Y T++ V EA L + GL+ D T + + G+
Sbjct: 426 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 477 LEKSWLWFRRFHLAGDMSSE 496
L + + + G M ++
Sbjct: 486 LHEVEALYTKMKQEGLMKND 505
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 204/451 (45%), Gaps = 4/451 (0%)
Query: 318 SLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAE-VD 376
S S ++Y LI+ YG+ G+ + + E +M E I P+ +T+NT+I+ E +
Sbjct: 173 SRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLL 232
Query: 377 SLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAY 436
L +M PD TYN L+ A A F M + + PD+ +Y L+ +
Sbjct: 233 GLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETF 292
Query: 437 SIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAG-DMSS 495
R + + +L+ EM GG D + + L Y ++G ++++ F + AG ++
Sbjct: 293 GKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNA 352
Query: 496 EGYSANIDGYGERGHVLEAERAFICCQEGKK-LTVLVFNVMVKAYGMGRNYDKACNLFDS 554
YS ++ +G+ G + + F+ + +N++++ +G G + + LF
Sbjct: 353 NTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Query: 555 MTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQ 614
M PD +Y +I L A++ L+ M +V Y VI ++ +
Sbjct: 413 MVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAAL 472
Query: 615 LEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNS 674
E A + M P + + L+ +FA G VK++++ + +G+P N +N+
Sbjct: 473 YEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNA 532
Query: 675 LIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG 734
I+ Y + G +EA +TY + PD T ++ +YS +V + E FE MK
Sbjct: 533 QIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASD 592
Query: 735 D-ANEFTYAMMLIMYKRNGRFEEATRIAKQM 764
+ Y MML +Y + R+++ + ++M
Sbjct: 593 ILPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 215/488 (44%), Gaps = 37/488 (7%)
Query: 322 YTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKK 381
+ Y +I G+ G L + E F +M +G+ + ++ +I+ YG N + L+ +
Sbjct: 142 HIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDR 201
Query: 382 MEELHCPPDTRTYNILIFLHAKN--DKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIR 439
M+ P TYN +I A+ D + F +M+ ++PDIV+Y TLL A +IR
Sbjct: 202 MKNEKISPSILTYNTVINACARGGLDWEGLLG-LFAEMRHEGIQPDIVTYNTLLSACAIR 260
Query: 440 RMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYS 499
+ EAE + M+ GG+ D T S L + + LEK L G+M+S G
Sbjct: 261 GLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVC------DLLGEMASGGSL 314
Query: 500 ANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHG 559
+I Y NV+++AY + +A +F M + G
Sbjct: 315 PDITSY---------------------------NVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 560 AVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAE 619
P+ +Y+ L+ + + ++ +M+ + D Y +I + + G +
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 407
Query: 620 EVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLY 679
++ DM+ N+EPD+ Y +I A G + A+ M + + P++ Y +I+ +
Sbjct: 408 TLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAF 467
Query: 680 TKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANE 738
+ +EA + + + ++P + T + ++ ++ +V+++E I + G N
Sbjct: 468 GQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNR 527
Query: 739 FTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKD 798
T+ + YK+ G+FEEA + M +S D + VL +Y+ + F++
Sbjct: 528 DTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEE 587
Query: 799 MVNAAIQP 806
M + I P
Sbjct: 588 MKASDILP 595
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 146/658 (22%), Positives = 279/658 (42%), Gaps = 36/658 (5%)
Query: 139 LQALDTVKDLDEALKPWAENLSNKERSIILKE---QSSWERALEIFEWFKRQECHELNVI 195
L +L + L + LS + +++ KE + W+R+L +F++ +RQ + N
Sbjct: 83 LSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEH 142
Query: 196 HYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERM 255
Y IM+ LG+ ++DEM +G+ +Y LI+ + G E ++ L+RM
Sbjct: 143 IYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM 202
Query: 256 NEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHV 315
+ P +T V+ R G D + ++G H
Sbjct: 203 KNEKISPSILTYNTVINA---------------------CARGGLDWEGLLGLFAEMRHE 241
Query: 316 NGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEV 375
TYNTL+ G EA F M GIVP T++ ++ +G +L +V
Sbjct: 242 GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKV 301
Query: 376 DSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYA 435
L+ +M PD +YN+L+ +AK+ I A F +M+ A P+ +Y LL
Sbjct: 302 CDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNL 361
Query: 436 YSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRF---HLAGD 492
+ + +L EM + D T + L ++ E G ++ F ++ D
Sbjct: 362 FGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD 421
Query: 493 MSSEGYSANIDGYGERGHVLEAERAFICCQEGKKL--TVLVFNVMVKAYGMGRNYDKACN 550
M E Y I G +G + E R + + + + +++A+G Y++A
Sbjct: 422 M--ETYEGIIFACG-KGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478
Query: 551 LFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYM 610
F++M G+ P +++SL+ A L ++ L ++ ++G+ + + A I +Y
Sbjct: 479 AFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYK 538
Query: 611 KLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAV 670
+ G+ E A + Y DM + +PD +++ ++ V + + F+ M+++ + P+ +
Sbjct: 539 QGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIM 598
Query: 671 IYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDL-YSERSMVRQAEEIFEI 729
Y ++ +Y K + E + + S S MI Y + S + E + +
Sbjct: 599 CYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDK 658
Query: 730 MKKKGDANEFT-YAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVD 786
+ +G Y +L G+ E A R+ + + GL +L N + +++VD
Sbjct: 659 LNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKL--VWSVD 714
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 197/450 (43%), Gaps = 15/450 (3%)
Query: 378 LIKKME-ELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAY 436
L K M+ ++ C P+ Y I+I L + + F +M + + SY L+ AY
Sbjct: 127 LFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAY 186
Query: 437 SIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE 496
+ EL+ M ++ + S LT + W L +M E
Sbjct: 187 GRNGRYETSLELLDRMKN-----EKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE 241
Query: 497 GYSANIDGYGE-------RGHVLEAERAFICCQEGKKLTVLV-FNVMVKAYGMGRNYDKA 548
G +I Y RG EAE F +G + L ++ +V+ +G R +K
Sbjct: 242 GIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKV 301
Query: 549 CNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISS 608
C+L M S G++PD SYN L++ A + A +MQ AG + Y +++
Sbjct: 302 CDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNL 361
Query: 609 YMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPN 668
+ + G+ + +++ +M N +PD Y +LI F + G K+ + F M + P+
Sbjct: 362 FGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD 421
Query: 669 AVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFE 728
Y +I K G ++A++ + + + + P +I+ + + ++ +A F
Sbjct: 422 METYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFN 481
Query: 729 IMKKKGDANEF-TYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDG 787
M + G T+ +L + R G +E+ I ++ +SG+ + ++N + Y G
Sbjct: 482 TMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGG 541
Query: 788 RFKDVIGTFKDMVNAAIQPDDFTFKSLGAV 817
+F++ + T+ DM + PD+ T +++ +V
Sbjct: 542 KFEEAVKTYVDMEKSRCDPDERTLEAVLSV 571
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 181/397 (45%), Gaps = 10/397 (2%)
Query: 460 DEYTQSALTRMYIEAGMLEKSWLWFRRFHLAG-DMSSEGYSANIDGYGERGHVLEAERAF 518
+E+ + + + G+L+K F G S Y+A I+ YG G E
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRY-ETSLEL 198
Query: 519 ICCQEGKKLT--VLVFNVMVKAYGMGR-NYDKACNLFDSMTSHGAVPDKCSYNSLIQILA 575
+ + +K++ +L +N ++ A G +++ LF M G PD +YN+L+ A
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 576 GADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVV 635
L A+ R M + G+V D Y ++ ++ KL +LE ++ +M PD+
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 636 VYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLL 695
Y VL+ A+A G++K+A F M++AG PNA Y+ L+ L+ + G + ++ + +
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 696 RSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRF 754
+S PD T N +I+++ E ++ +F M ++ + + TY ++ + G
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH 438
Query: 755 EEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSL 814
E+A +I + M + ++ +Y V+ + +++ + F M P TF SL
Sbjct: 439 EDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSL 498
Query: 815 GAVLMKCGL----ELTRKKNAQSGLQAWMSTLSSVIE 847
+ GL E + SG+ T ++ IE
Sbjct: 499 LYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIE 535
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 141/579 (24%), Positives = 238/579 (41%), Gaps = 22/579 (3%)
Query: 289 KWSSRESLRHG-EDTKT--MIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFA 345
K S +E LR+G D K I E+ + +N L + Q
Sbjct: 35 KLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCK 94
Query: 346 QMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKND 405
M GI T MI+ Y +L S++ + +L PDT T++ L+
Sbjct: 95 GMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEG 154
Query: 406 KISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQS 465
++S A +M E PD+V+ TL+ ++ V EA LI M G + DE T
Sbjct: 155 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214
Query: 466 ALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE-GYSANIDGYGERGHVLEAERAFICCQ-E 523
+ ++G + FR+ +S YS ID + G +A F + +
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 524 GKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMA 583
G K V+ ++ ++ +D + M +PD ++++LI + A
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 584 KRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINA 643
K +M G+ D I Y ++I + K L A +++ M+ EPD+V Y +LIN+
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 644 FADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPD 703
+ V F + S GL PN + YN+L+ + + G L A+E ++ + S P
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 704 VYTSNCMIDLYSERSMVRQAEEIFEIMKKK------GDANEFTYAMMLIMYKRNGRFEEA 757
V T ++D + + +A EIFE M+K G N + M + ++A
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC-----NASKVDDA 509
Query: 758 TRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFK----- 812
+ + + G+ D+++YN ++G G + F+ M PDDFT+
Sbjct: 510 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Query: 813 SLGAVLMKCGLELTRKKNAQSGLQAWMSTLSSVIEECDD 851
LG + +EL + G A ST+ VI+ D
Sbjct: 570 HLGGSGLISSVELIEEMKV-CGFSADSSTIKMVIDMLSD 607
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/566 (21%), Positives = 246/566 (43%), Gaps = 26/566 (4%)
Query: 195 IHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDV-CSKGGLKEEAVCWLE 253
I +N + + + +++ V M + GI T +I+ C K L A L
Sbjct: 71 IDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLF-AFSVLG 129
Query: 254 RMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGS 313
R + G EPD +T +V + G +A + V+
Sbjct: 130 RAWKLGYEPDTITFSTLVNGFCLEGRVSEA----------------------VALVDRMV 167
Query: 314 HVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLA 373
+ T +TLI+ G++ EA +M+ G P VT+ +++ + A
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 374 EVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLL 433
L +KMEE + Y+I+I K+ A F +M+ ++ D+V+Y +L+
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 434 YAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAG-MLEKSWLWFRRFHLAGD 492
+ +++ EM G + D T SAL ++++ G +LE L+
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 493 MSSEGYSANIDGYGERGHVLEAERAF-ICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNL 551
+ Y++ IDG+ + + EA + F + +G + ++ +++++ +Y + D L
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 552 FDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMK 611
F ++S G +P+ +YN+L+ + + AK ++M G+ + Y ++
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 612 LGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVI 671
G+L A E+++ M + + + +Y ++I+ + V A S F ++ G+ P+ V
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 672 YNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMK 731
YN +I K G L EA ++ ++ +PD +T N +I + S + + E+ E MK
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Query: 732 KKGDANEFTYAMMLIMYKRNGRFEEA 757
G + + + M+I + R +++
Sbjct: 588 VCGFSADSSTIKMVIDMLSDRRLDKS 613
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 206/473 (43%), Gaps = 17/473 (3%)
Query: 190 HELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLID-VCSKGGLKEEA 248
+E + I ++ ++ + S +L D M P T TLI+ +C KG + EA
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRV-SEA 194
Query: 249 VCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGK 308
+ ++RM E G +PDEVT G V+ K+G A + F+K R +I
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 309 VENGSHVNGSLSSY-------------TYNTLIDTYGKAGQLKEASETFAQMLREGIVPT 355
+ + +LS + TY++LI G+ + ++ +M+ I+P
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 356 TVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFW 415
VTF+ +I ++ +L E L +M PDT TYN LI K + + A++ F
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 416 KMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAG 475
M EPDIV+Y L+ +Y + V + L E+ GL + T + L + ++G
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 476 MLEKSWLWFRRFHLAG-DMSSEGYSANIDGYGERGHVLEAERAFICCQEGK-KLTVLVFN 533
L + F+ G S Y +DG + G + +A F Q+ + L + ++N
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 534 VMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEA 593
+++ D A +LF S++ G PD +YN +I L A RKM+E
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Query: 594 GLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFAD 646
G D Y +I +++ L + E+ ++M D ++I+ +D
Sbjct: 555 GCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 180/423 (42%), Gaps = 58/423 (13%)
Query: 177 ALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLI 236
AL++F + + +V+ Y+I++ +L K + SL++EM +KGI TY +LI
Sbjct: 229 ALDLFRKMEERNIKA-SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 237 DVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESL 296
G ++ L M + PD VT ++ ++ K G+ +A+E + + +R
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR--- 344
Query: 297 RHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTT 356
G T+ TYN+LID + K L EA++ F M+ +G P
Sbjct: 345 --GIAPDTI-----------------TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDI 385
Query: 357 VTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWK 416
VT++ +I+ Y ++ + L +++ P+T TYN L+ ++ K++ A F +
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445
Query: 417 MKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGM 476
M + P +V+Y LL +C+ EL LEI E Q +RM + G+
Sbjct: 446 MVSRGVPPSVVTYGILLDG------LCDNGEL-----NKALEIFEKMQK--SRMTLGIGI 492
Query: 477 LEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFICCQE-GKKLTVLVFNVM 535
Y+ I G V +A F + G K V+ +NVM
Sbjct: 493 ---------------------YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 531
Query: 536 VKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGL 595
+ + +A LF M G PD +YN LI+ G + + +M+ G
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGF 591
Query: 596 VSD 598
+D
Sbjct: 592 SAD 594
Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 25/273 (9%)
Query: 170 EQSSWERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPIN 229
+++ A ++F+ + C E +++ Y+I++ + KA++ L+ E+S KG++P
Sbjct: 362 KENCLHEANQMFDLMVSKGC-EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Query: 230 STYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKK 289
TY TL+ + G A + M G+ P VT GI++ GE KA E F+K
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 290 WS-SRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQML 348
SR +L G YN +I A ++ +A F +
Sbjct: 481 MQKSRMTLGIG-----------------------IYNIIIHGMCNASKVDDAWSLFCSLS 517
Query: 349 REGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKIS 408
+G+ P VT+N MI L+E D L +KM+E C PD TYNILI H +
Sbjct: 518 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI 577
Query: 409 MASRYFWKMKEANLEPDIVSYRTLLYAYSIRRM 441
+ +MK D + + ++ S RR+
Sbjct: 578 SSVELIEEMKVCGFSADSSTIKMVIDMLSDRRL 610
>sp|Q9LMH5|PPR42_ARATH Putative pentatricopeptide repeat-containing protein At1g13800
OS=Arabidopsis thaliana GN=At1g13800 PE=3 SV=1
Length = 883
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 159/656 (24%), Positives = 273/656 (41%), Gaps = 80/656 (12%)
Query: 195 IHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLER 254
I Y ++R L + +S+ +M GI P Y +I+ K +AV +
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 255 MNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSH 314
M + + V + ++Q Y + G F +A + FK++ RE+
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEF--RET------------------- 390
Query: 315 VNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAE 374
N SL YN D GK G+++EA E F +M +GI
Sbjct: 391 -NISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIA--------------------- 428
Query: 375 VDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLY 434
PD Y LI K S A +M PDIV Y L
Sbjct: 429 --------------PDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAG 474
Query: 435 AYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMS 494
+ + EA E + M+ G++ T + + I+AG L+K+ ++ S
Sbjct: 475 GLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLE---HKS 531
Query: 495 SEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNY-DKACNLFD 553
E ++ + G+ G + A FI + L V+ + + ++Y KA +L D
Sbjct: 532 RENDASMVKGFCAAGCLDHAFERFIRLEF--PLPKSVYFTLFTSLCAEKDYISKAQDLLD 589
Query: 554 SMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLG 613
M G P+K Y LI + A+ + + +V D Y +I++Y +L
Sbjct: 590 RMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLN 649
Query: 614 QLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYN 673
+ + A +++DM R +V+PDVV Y VL+N+ ++ ++K+ FD + P+ V Y
Sbjct: 650 EPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPEL-DMKREMEAFDVI------PDVVYYT 702
Query: 674 SLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKK 733
+I Y + LK+ +K ++ E PDV T ++ ER++ R+ + F++ K
Sbjct: 703 IMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKA-FDV---K 758
Query: 734 GDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVI 793
D F Y +++ + G EA RI QM ESG+ D Y ++ G K+
Sbjct: 759 PDV--FYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAK 816
Query: 794 GTFKDMVNAAIQPDDFTFKSLGAVLMKCGLELTR----KKNAQSGLQAWMSTLSSV 845
F M+ + ++PD + +L A + G L K+ + G++ ++LS+V
Sbjct: 817 MIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 116 bits (291), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 130/560 (23%), Positives = 215/560 (38%), Gaps = 113/560 (20%)
Query: 170 EQSSWERALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPIN 229
+ ++ A ++F+ F R+ L+ + YN+ LGK K L+ EM+ KGI P
Sbjct: 373 QMGNFSEAYDLFKEF-RETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDV 431
Query: 230 STYGTLIDVC-----------------------------------SKGGLKEEAVCWLER 254
Y TLI C + GL +EA L+
Sbjct: 432 INYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKM 491
Query: 255 MNEGGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSH 314
M G++P VT +V++ AGE KAE F+ ESL H + + S
Sbjct: 492 MENRGVKPTYVTHNMVIEGLIDAGELDKAEAFY------ESLEHK-------SRENDASM 538
Query: 315 VNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAE 374
V G + AG L A E F ++ E +P +V F + D +++
Sbjct: 539 VKG-------------FCAAGCLDHAFERFIRL--EFPLPKSVYFTLFTSLCAEKDYISK 583
Query: 375 VDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLY 434
L+ +M +L P+ Y LI + + + A +F + + PD+ +Y ++
Sbjct: 584 AQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMIN 643
Query: 435 AYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMS 494
Y +A L +M ++ D T S L E M +R A D+
Sbjct: 644 TYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDM--------KREMEAFDVI 695
Query: 495 SEGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDS 554
+ V+ + +M+ Y + K LF
Sbjct: 696 PD--------------------------------VVYYTIMINRYCHLNDLKKVYALFKD 723
Query: 555 MTSHGAVPDKCSYNSLIQILAGADLPHMAKRYL-RKMQEAGLVSDCIPYCAVISSYMKLG 613
M VPD +Y L++ + +R L R+M+ + D Y +I K+G
Sbjct: 724 MKRREIVPDVVTYTVLLK--------NKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIG 775
Query: 614 QLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYN 673
L A+ ++ MI V+PD Y LI +G +K+A+ FD M +G+ P+ V Y
Sbjct: 776 DLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYT 835
Query: 674 SLIKLYTKVGYLKEAQETYK 693
+LI + G++ +A + K
Sbjct: 836 ALIAGCCRNGFVLKAVKLVK 855
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 5/245 (2%)
Query: 567 YNSLIQILAGADLPHMAKRYLRKMQEAGLVSD----CIPYCAVISSYMKLGQLEMAEEVY 622
Y + I+ L + +A L+ +++A ++ D I Y V+ ++E AE V
Sbjct: 255 YLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVV 314
Query: 623 KDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKV 682
DM + ++PDV VY +I N+ +A F+ M N VI +S+++ Y ++
Sbjct: 315 LDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQM 374
Query: 683 GYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKGDANE-FTY 741
G EA + +K R S D N D + V +A E+F M KG A + Y
Sbjct: 375 GNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINY 434
Query: 742 AMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVN 801
++ G+ +A + +M +G D++ YN + G A +G ++ T K M N
Sbjct: 435 TTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMEN 494
Query: 802 AAIQP 806
++P
Sbjct: 495 RGVKP 499
Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 114/546 (20%), Positives = 212/546 (38%), Gaps = 76/546 (13%)
Query: 360 NTMIHIYGNNDQLAE-VDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMK 418
++ Y N D E +D + L PD + N LI + + M +FW+++
Sbjct: 150 TALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIE 209
Query: 419 EANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGG--------------GLEIDEYTQ 464
L+ D +Y ++ A E E+L+S + GL +++ T
Sbjct: 210 RLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTD 269
Query: 465 SA--LTRMYIEAGML-EKSWLW--FRRF--------------HLAGDMSSEG-------Y 498
A L + +A +L +KS L +R+ + DM G Y
Sbjct: 270 IAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVY 329
Query: 499 SANIDGYGERGHVLEAERAF-ICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTS 557
SA I+G+ + ++ +A F ++ K++ ++ + +++ Y N+ +A +LF
Sbjct: 330 SAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRE 389
Query: 558 HGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEM 617
D+ YN L A R+M G+ D I Y +I G+
Sbjct: 390 TNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSD 449
Query: 618 AEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIK 677
A ++ +M PD+V+Y VL A G ++A ME+ G+ P V +N +I+
Sbjct: 450 AFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIE 509
Query: 678 LYTKVGYLKEAQETYKLL----RSLEAS-------------------------PDVYTSN 708
G L +A+ Y+ L R +AS P
Sbjct: 510 GLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFT 569
Query: 709 CMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEEATRIAKQMRES 767
L +E+ + +A+++ + M K G + + Y ++ + R +A + +
Sbjct: 570 LFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTK 629
Query: 768 GLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCGLELTR 827
++ DL +Y ++ Y K F+DM ++PD T+ +VL+ EL
Sbjct: 630 KIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTY----SVLLNSDPELDM 685
Query: 828 KKNAQS 833
K+ ++
Sbjct: 686 KREMEA 691
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 111/288 (38%), Gaps = 26/288 (9%)
Query: 163 ERSIILKEQSSWER------ALEIFEWFKRQECHELNVIHYNIMLRTLGKARKWSYVQSL 216
E+S+ K +W R A E FE ++ ++ Y IM+ T + + +L
Sbjct: 599 EKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVP-DLFTYTIMINTYCRLNEPKQAYAL 657
Query: 217 WDEMSVKGIVPINSTYGTLIDVCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKK 276
+++M + + P TY L++ + +K E M + PD V I++ Y
Sbjct: 658 FEDMKRRDVKPDVVTYSVLLNSDPELDMKRE-------MEAFDVIPDVVYYTIMINRYCH 710
Query: 277 AGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVNGSL---------SSYTYNTL 327
+ +K FK RE + D T ++N N S + Y L
Sbjct: 711 LNDLKKVYALFKDMKRREIV---PDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVL 767
Query: 328 IDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHC 387
ID K G L EA F QM+ G+ P + +I L E + +M E
Sbjct: 768 IDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGV 827
Query: 388 PPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYA 435
PD Y LI +N + A + +M E ++P S + YA
Sbjct: 828 KPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYA 875
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 126/295 (42%), Gaps = 8/295 (2%)
Query: 527 LTVLVFNVMVKAYGMGRNYDKACNL-FDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKR 585
L + V +VKAY +D+A ++ F + S G PD + N LI + + M
Sbjct: 144 LLIRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVG 203
Query: 586 YLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVY-----GVL 640
+ +++ GL +D Y V+ + + E E++ ++ V Y G+
Sbjct: 204 FFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLC 263
Query: 641 INAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEA 700
+N D+ Q DA + Y +++ +++A+ +
Sbjct: 264 LNQMTDIAYF-LLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGI 322
Query: 701 SPDVYTSNCMIDLYSERSMVRQAEEIF-EIMKKKGDANEFTYAMMLIMYKRNGRFEEATR 759
PDVY + +I+ + + + +A ++F +++KK+ N + +L Y + G F EA
Sbjct: 323 DPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYD 382
Query: 760 IAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSL 814
+ K+ RE+ + D + YN G+ ++ I F++M I PD + +L
Sbjct: 383 LFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTL 437
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 146/562 (25%), Positives = 229/562 (40%), Gaps = 110/562 (19%)
Query: 193 NVIHYNIMLRTLGKARKWSYVQSLWDEMSVKGIVPINSTYGTLID--------------- 237
NV YNI++R A +L+D+M KG +P TY TLID
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 238 ---------------------VCSKGGLKEEAVCWLERMNEGGMEPDEVTMGIVVQMYKK 276
+C +G +KE + E MN G DEVT +++ Y K
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE-MNRRGYSLDEVTYNTLIKGYCK 322
Query: 277 AGEFQKAEEFFKKWSSRESLRHGEDTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQ 336
G F +A E LRHG T ++I TY +LI + KAG
Sbjct: 323 EGNFHQA-----LVMHAEMLRHGL-TPSVI----------------TYTSLIHSMCKAGN 360
Query: 337 LKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNI 396
+ A E QM G+ P T+ T++ + + E ++++M + P TYN
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 397 LIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGG 456
LI H K+ A MKE L PD+VSY T+L + V EA + EM G
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 457 LEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE-GYSANIDGYGERGHVLEAE 515
++ D T S+L + + E +++ + G E Y+A I+ Y
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY---------- 530
Query: 516 RAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILA 575
C EG + +KA L + M G +PD +Y+ LI L
Sbjct: 531 -----CMEG-------------------DLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 576 GADLPHMAKRYLRKM--QEA--------GLVSDC--IPYCAVIS---SYMKLGQLEMAEE 620
AKR L K+ +E+ L+ +C I + +V+S + G + A++
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626
Query: 621 VYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYT 680
V++ M+ N +PD Y ++I+ G++++A + + M +G + V +L+K
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALH 686
Query: 681 KVGYLKEAQET-YKLLRSLEAS 701
K G + E +LRS E S
Sbjct: 687 KEGKVNELNSVIVHVLRSCELS 708
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 218/467 (46%), Gaps = 18/467 (3%)
Query: 322 YTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKK 381
+TYN LI + AG + A F +M +G +P VT+NT+I Y ++ + L++
Sbjct: 206 FTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRS 265
Query: 382 MEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRM 441
M P+ +YN++I + ++ S +M D V+Y TL+ Y
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325
Query: 442 VCEAEELISEMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE-GYSA 500
+A + +EM GL T ++L +AG + ++ + + + G +E Y+
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 501 NIDGYGERGHVLEAERAFICCQE-GKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHG 559
+DG+ ++G++ EA R + G +V+ +N ++ + + + A + + M G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 560 AVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAE 619
PD SY++++ + A R R+M E G+ D I Y ++I + + + + A
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 620 EVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLY 679
++Y++M+R + PD Y LINA+ G++++A + M G+ P+ V Y+ LI
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 680 TKVGYLKEAQETYKLLRSLEASPDVYT-----SNC----------MIDLYSERSMVRQAE 724
K +EA+ L E+ P T NC +I + + M+ +A+
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEAD 625
Query: 725 EIFEIMKKKGDANEFT-YAMMLIMYKRNGRFEEATRIAKQMRESGLI 770
++FE M K + T Y +M+ + R G +A + K+M +SG +
Sbjct: 626 QVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 213/478 (44%), Gaps = 58/478 (12%)
Query: 345 AQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELH--CPPDTRTYNILIFLHA 402
AQ+L E + T+ +D+ A + + K ++E + C + +++++ ++
Sbjct: 99 AQILAEDVAAKTL-----------DDEYASL--VFKSLQETYDLCYSTSSVFDLVVKSYS 145
Query: 403 KNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIR--RMVCEAEELISEMDGGGLEID 460
+ I A + P ++SY +L A +IR R + AE + EM + +
Sbjct: 146 RLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDA-TIRSKRNISFAENVFKEMLESQVSPN 204
Query: 461 EYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSANIDGYGERGHVLEAERAFIC 520
+T + L R + AG ++ + F + M ++G N
Sbjct: 205 VFTYNILIRGFCFAGNIDVALTLFDK------METKGCLPN------------------- 239
Query: 521 CQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGADLP 580
V+ +N ++ Y R D L SM G P+ SYN +I L
Sbjct: 240 --------VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 581 HMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGVL 640
L +M G D + Y +I Y K G A ++ +M+R + P V+ Y L
Sbjct: 292 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 351
Query: 641 INAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEA 700
I++ GN+ +A + D M GL PN Y +L+ +++ GY+ EA Y++LR +
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA---YRVLREMND 408
Query: 701 ---SPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG-DANEFTYAMMLIMYKRNGRFEE 756
SP V T N +I+ + + A + E MK+KG + +Y+ +L + R+ +E
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Query: 757 ATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIGTFKDMVNAAIQPDDFTFKSL 814
A R+ ++M E G+ D ++Y++++ + R K+ +++M+ + PD+FT+ +L
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 220/500 (44%), Gaps = 41/500 (8%)
Query: 320 SSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFNTMIH-IYGNNDQLAEVDSL 378
+S ++ ++ +Y + + +A G +P +++N ++ + ++ +++
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 379 IKKMEELHCPPDTRTYNILI--FLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAY 436
K+M E P+ TYNILI F A N I +A F KM+ P++V+Y TL+ Y
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGN--IDVALTLFDKMETKGCLPNVVTYNTLIDGY 250
Query: 437 SIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAG-MLEKSWLWFRRFHLAGDMSS 495
R + + +L+ M GLE + + + + G M E S++ +M+
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL-------TEMNR 303
Query: 496 EGYSANIDGYGERGHVLEAERAFICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSM 555
GYS L + +N ++K Y N+ +A + M
Sbjct: 304 RGYS---------------------------LDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 556 TSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQL 615
HG P +Y SLI + A + A +L +M+ GL + Y ++ + + G +
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 616 EMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESAGLPPNAVIYNSL 675
A V ++M P VV Y LIN G ++ A + + M+ GL P+ V Y+++
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 676 IKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIMKKKG- 734
+ + + + EA + + PD T + +I + E+ ++A +++E M + G
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 735 DANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVDGRFKDVIG 794
+EFTY ++ Y G E+A ++ +M E G++ D+++Y+ ++ R ++
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 795 TFKDMVNAAIQPDDFTFKSL 814
+ P D T+ +L
Sbjct: 577 LLLKLFYEESVPSDVTYHTL 596
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 311,865,070
Number of Sequences: 539616
Number of extensions: 13134598
Number of successful extensions: 51498
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 36596
Number of HSP's gapped (non-prelim): 3929
length of query: 856
length of database: 191,569,459
effective HSP length: 126
effective length of query: 730
effective length of database: 123,577,843
effective search space: 90211825390
effective search space used: 90211825390
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)