Query 003024
Match_columns 856
No_of_seqs 636 out of 3844
Neff 7.6
Searched_HMMs 46136
Date Thu Mar 28 15:31:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003024.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003024hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02205 alpha,alpha-trehalose 100.0 2E-191 4E-196 1710.6 89.6 843 1-845 1-850 (854)
2 PLN03064 alpha,alpha-trehalose 100.0 3E-159 7E-164 1419.7 83.3 747 60-845 93-932 (934)
3 PLN03063 alpha,alpha-trehalose 100.0 1E-151 3E-156 1367.4 84.4 752 58-849 8-793 (797)
4 PRK14501 putative bifunctional 100.0 3E-142 6E-147 1290.8 84.0 720 61-841 1-725 (726)
5 KOG1050 Trehalose-6-phosphate 100.0 9E-132 2E-136 1156.8 60.5 728 60-837 2-731 (732)
6 PRK10117 trehalose-6-phosphate 100.0 6E-121 1E-125 1023.8 49.7 455 61-549 2-456 (474)
7 TIGR02398 gluc_glyc_Psyn gluco 100.0 2E-119 4E-124 1023.2 49.6 462 66-546 1-482 (487)
8 PF00982 Glyco_transf_20: Glyc 100.0 5E-120 1E-124 1031.3 34.2 467 62-546 2-474 (474)
9 COG0380 OtsA Trehalose-6-phosp 100.0 4E-114 9E-119 961.9 44.7 466 57-547 11-480 (486)
10 TIGR02400 trehalose_OtsA alpha 100.0 1E-107 3E-112 933.7 49.5 454 62-545 1-455 (456)
11 cd03788 GT1_TPS Trehalose-6-Ph 100.0 5.2E-98 1E-102 860.7 52.4 459 62-544 1-459 (460)
12 TIGR02468 sucrsPsyn_pln sucros 100.0 3.8E-35 8.2E-40 353.0 42.2 543 202-792 312-990 (1050)
13 COG1877 OtsB Trehalose-6-phosp 100.0 6.2E-33 1.3E-37 291.1 23.1 249 578-844 5-256 (266)
14 PF02358 Trehalose_PPase: Treh 100.0 3.3E-33 7.1E-38 294.9 17.8 227 595-830 1-235 (235)
15 TIGR00685 T6PP trehalose-phosp 100.0 6.2E-32 1.3E-36 286.7 26.1 237 589-840 1-243 (244)
16 PRK10187 trehalose-6-phosphate 100.0 1.1E-31 2.4E-36 287.6 27.4 232 591-845 14-249 (266)
17 PLN03017 trehalose-phosphatase 100.0 3.8E-31 8.2E-36 288.2 27.7 243 586-844 106-363 (366)
18 PLN02580 trehalose-phosphatase 100.0 4.2E-31 9E-36 290.5 27.5 241 584-843 112-380 (384)
19 PLN02151 trehalose-phosphatase 100.0 5.9E-31 1.3E-35 286.0 27.6 240 587-842 94-347 (354)
20 PRK15126 thiamin pyrimidine py 99.9 5.5E-26 1.2E-30 245.3 22.4 225 590-841 1-263 (272)
21 COG0561 Cof Predicted hydrolas 99.9 8.1E-26 1.8E-30 242.9 23.6 225 590-841 2-262 (264)
22 PRK10976 putative hydrolase; P 99.9 1.2E-25 2.6E-30 241.9 23.2 224 590-840 1-264 (266)
23 PRK10513 sugar phosphate phosp 99.9 2.2E-25 4.7E-30 240.3 24.5 224 590-840 2-268 (270)
24 cd03792 GT1_Trehalose_phosphor 99.9 1.6E-24 3.5E-29 244.3 23.9 302 175-546 62-371 (372)
25 PRK01158 phosphoglycolate phos 99.9 2.5E-24 5.4E-29 226.4 23.3 213 590-840 2-229 (230)
26 PRK03669 mannosyl-3-phosphogly 99.9 2.9E-24 6.2E-29 231.8 22.9 224 590-842 6-270 (271)
27 PLN02887 hydrolase family prot 99.9 4E-24 8.6E-29 248.9 24.4 231 582-840 300-579 (580)
28 PF08282 Hydrolase_3: haloacid 99.9 5.9E-24 1.3E-28 225.0 22.0 216 594-836 1-254 (254)
29 TIGR01484 HAD-SF-IIB HAD-super 99.9 9.6E-24 2.1E-28 217.9 18.1 195 593-798 1-201 (204)
30 PRK15484 lipopolysaccharide 1, 99.9 1.4E-22 3E-27 229.4 28.7 269 201-546 100-377 (380)
31 PRK10530 pyridoxal phosphate ( 99.9 4E-23 8.6E-28 222.8 22.1 222 590-840 2-271 (272)
32 PLN02939 transferase, transfer 99.9 3.2E-22 6.9E-27 238.3 30.8 320 178-548 589-968 (977)
33 TIGR02472 sucr_P_syn_N sucrose 99.9 1.3E-22 2.9E-27 233.8 25.3 314 179-544 94-438 (439)
34 PLN02316 synthase/transferase 99.9 4.1E-22 9E-27 241.6 30.2 309 178-548 688-1035(1036)
35 PRK00654 glgA glycogen synthas 99.9 2.5E-22 5.5E-27 233.2 27.4 293 202-547 120-463 (466)
36 TIGR03449 mycothiol_MshA UDP-N 99.9 1.3E-21 2.8E-26 223.0 30.6 287 201-547 102-402 (405)
37 PRK14098 glycogen synthase; Pr 99.9 2.9E-22 6.2E-27 233.0 25.3 319 177-547 119-486 (489)
38 TIGR01482 SPP-subfamily Sucros 99.9 8.7E-23 1.9E-27 213.8 18.7 211 594-839 1-224 (225)
39 TIGR00099 Cof-subfamily Cof su 99.9 1.6E-22 3.5E-27 216.3 21.0 217 593-836 1-256 (256)
40 TIGR02095 glgA glycogen/starch 99.9 7E-22 1.5E-26 230.1 26.0 309 182-545 111-471 (473)
41 TIGR01487 SPP-like sucrose-pho 99.9 2.5E-22 5.4E-27 209.2 19.9 208 591-836 1-215 (215)
42 cd03818 GT1_ExpC_like This fam 99.9 1E-21 2.2E-26 223.5 24.9 305 179-541 68-395 (396)
43 TIGR01485 SPP_plant-cyano sucr 99.9 3.5E-22 7.7E-27 212.8 19.5 221 592-839 2-246 (249)
44 PRK15427 colanic acid biosynth 99.9 2.4E-21 5.3E-26 220.9 27.4 274 202-546 120-405 (406)
45 cd03796 GT1_PIG-A_like This fa 99.9 2.3E-21 4.9E-26 220.8 26.5 282 194-549 84-370 (398)
46 PRK14099 glycogen synthase; Pr 99.9 6.2E-21 1.3E-25 221.7 29.5 298 197-549 132-481 (485)
47 TIGR01486 HAD-SF-IIB-MPGP mann 99.9 1.2E-21 2.5E-26 209.7 20.4 219 593-839 1-255 (256)
48 PLN02871 UDP-sulfoquinovose:DA 99.9 4.8E-21 1.1E-25 222.6 26.0 284 193-550 139-438 (465)
49 PTZ00174 phosphomannomutase; P 99.9 3E-21 6.5E-26 205.3 21.9 198 589-797 3-225 (247)
50 TIGR02471 sucr_syn_bact_C sucr 99.9 2.6E-21 5.6E-26 204.5 20.4 214 593-839 1-234 (236)
51 PRK00192 mannosyl-3-phosphogly 99.9 6.5E-21 1.4E-25 205.9 23.5 226 589-840 2-270 (273)
52 cd03791 GT1_Glycogen_synthase_ 99.9 2E-20 4.4E-25 218.0 25.9 309 180-543 110-473 (476)
53 TIGR03088 stp2 sugar transfera 99.9 3.4E-20 7.4E-25 208.9 26.7 207 299-546 160-372 (374)
54 cd03800 GT1_Sucrose_synthase T 99.9 4.6E-20 1E-24 208.5 27.8 284 202-541 103-397 (398)
55 TIGR02470 sucr_synth sucrose s 99.9 1.1E-19 2.4E-24 216.1 30.4 338 176-544 361-745 (784)
56 TIGR02149 glgA_Coryne glycogen 99.9 8.5E-20 1.8E-24 206.4 27.8 285 201-547 84-387 (388)
57 cd04951 GT1_WbdM_like This fam 99.9 5.8E-20 1.3E-24 204.4 25.9 281 192-544 73-358 (360)
58 TIGR02463 MPGP_rel mannosyl-3- 99.9 1.3E-20 2.8E-25 197.1 19.0 196 593-798 1-217 (221)
59 PLN00142 sucrose synthase 99.9 8.2E-20 1.8E-24 217.2 27.8 333 176-544 384-768 (815)
60 PLN02382 probable sucrose-phos 99.8 2.6E-20 5.6E-25 211.0 20.0 230 588-842 6-262 (413)
61 cd03806 GT1_ALG11_like This fa 99.8 1E-19 2.3E-24 208.4 24.9 195 300-535 213-415 (419)
62 cd03813 GT1_like_3 This family 99.8 9.4E-20 2E-24 212.2 24.6 300 173-542 148-472 (475)
63 cd05844 GT1_like_7 Glycosyltra 99.8 1.5E-19 3.3E-24 202.3 25.4 274 193-541 77-365 (367)
64 PLN02423 phosphomannomutase 99.8 1.8E-19 3.9E-24 191.1 23.2 211 590-840 6-244 (245)
65 cd04962 GT1_like_5 This family 99.8 6.1E-19 1.3E-23 197.7 28.5 285 187-545 74-369 (371)
66 cd03819 GT1_WavL_like This fam 99.8 2.9E-19 6.2E-24 198.8 24.2 269 194-531 74-349 (355)
67 PLN02949 transferase, transfer 99.8 8.1E-19 1.8E-23 202.2 27.3 314 151-548 109-458 (463)
68 cd03812 GT1_CapH_like This fam 99.8 2.7E-19 5.9E-24 199.2 22.5 261 193-521 75-340 (358)
69 cd03809 GT1_mtfB_like This fam 99.8 2.6E-19 5.7E-24 198.6 21.7 275 197-541 84-364 (365)
70 cd03805 GT1_ALG2_like This fam 99.8 7.9E-19 1.7E-23 198.7 25.7 280 201-539 95-391 (392)
71 PRK15179 Vi polysaccharide bio 99.8 4.4E-19 9.5E-24 211.4 23.7 281 194-542 396-689 (694)
72 PRK15490 Vi polysaccharide bio 99.8 1.1E-18 2.3E-23 199.4 24.5 293 193-546 275-575 (578)
73 PRK10307 putative glycosyl tra 99.8 4.5E-18 9.8E-23 194.6 28.5 282 202-548 108-409 (412)
74 cd03801 GT1_YqgM_like This fam 99.8 2.7E-18 5.8E-23 188.5 25.3 286 193-544 80-373 (374)
75 cd04946 GT1_AmsK_like This fam 99.8 3.4E-18 7.5E-23 195.3 27.1 272 198-541 125-406 (407)
76 cd03799 GT1_amsK_like This is 99.8 3.1E-18 6.6E-23 190.2 25.8 268 195-538 76-353 (355)
77 TIGR02918 accessory Sec system 99.8 3.5E-18 7.6E-23 198.8 27.0 272 200-546 211-499 (500)
78 cd03822 GT1_ecORF704_like This 99.8 2.1E-18 4.6E-23 191.4 23.7 283 194-544 72-365 (366)
79 cd03821 GT1_Bme6_like This fam 99.8 2.8E-18 6.1E-23 189.9 24.2 273 202-541 89-374 (375)
80 PRK14502 bifunctional mannosyl 99.8 7.6E-19 1.6E-23 203.5 20.2 197 589-797 414-652 (694)
81 cd03814 GT1_like_2 This family 99.8 4.6E-18 1E-22 188.4 24.3 276 195-544 80-363 (364)
82 cd03793 GT1_Glycogen_synthase_ 99.8 2.2E-18 4.7E-23 196.9 22.0 358 154-545 106-585 (590)
83 cd03798 GT1_wlbH_like This fam 99.8 4.6E-18 1E-22 187.5 23.7 282 196-545 91-375 (377)
84 cd03817 GT1_UGDG_like This fam 99.8 5E-18 1.1E-22 188.1 24.0 270 193-532 79-362 (374)
85 cd03794 GT1_wbuB_like This fam 99.8 9.3E-18 2E-22 186.5 25.5 278 196-540 97-393 (394)
86 cd03807 GT1_WbnK_like This fam 99.8 1E-17 2.2E-22 184.7 25.3 282 194-543 76-363 (365)
87 PRK10125 putative glycosyl tra 99.8 4E-18 8.6E-23 194.2 21.3 186 299-544 212-402 (405)
88 cd04949 GT1_gtfA_like This fam 99.8 4.2E-18 9.1E-23 191.7 21.2 281 182-539 83-371 (372)
89 PHA01633 putative glycosyl tra 99.8 1.6E-18 3.5E-23 190.2 17.2 193 304-541 118-334 (335)
90 cd03820 GT1_amsD_like This fam 99.8 2.3E-18 4.9E-23 188.3 17.0 264 195-541 80-347 (348)
91 TIGR02461 osmo_MPG_phos mannos 99.8 4.5E-18 9.8E-23 178.1 17.9 190 593-797 1-220 (225)
92 PRK09922 UDP-D-galactose:(gluc 99.8 1.2E-17 2.5E-22 187.7 21.3 240 192-514 78-326 (359)
93 cd03823 GT1_ExpE7_like This fa 99.8 4.1E-17 8.9E-22 180.2 25.0 263 191-542 89-355 (359)
94 PRK12702 mannosyl-3-phosphogly 99.8 1.5E-17 3.3E-22 175.3 20.3 189 591-798 1-248 (302)
95 PLN02846 digalactosyldiacylgly 99.8 1.1E-17 2.3E-22 190.6 20.4 270 193-545 111-390 (462)
96 cd03808 GT1_cap1E_like This fa 99.8 4.9E-17 1.1E-21 178.5 22.4 278 193-541 75-358 (359)
97 PF05116 S6PP: Sucrose-6F-phos 99.8 3E-18 6.6E-23 181.9 11.6 193 591-818 2-209 (247)
98 cd03816 GT1_ALG1_like This fam 99.8 6.4E-17 1.4E-21 185.3 22.9 164 335-541 231-408 (415)
99 PLN02501 digalactosyldiacylgly 99.7 3.3E-17 7.2E-22 188.8 19.1 319 137-544 379-707 (794)
100 cd03795 GT1_like_4 This family 99.7 1.3E-16 2.7E-21 177.3 21.9 258 202-530 85-349 (357)
101 TIGR03087 stp1 sugar transfera 99.7 5.4E-16 1.2E-20 176.7 25.3 189 300-544 197-394 (397)
102 cd03811 GT1_WabH_like This fam 99.7 1.9E-16 4.2E-21 173.1 19.6 247 195-511 78-328 (353)
103 PHA01630 putative group 1 glyc 99.7 2.5E-16 5.4E-21 174.4 19.3 186 300-545 119-329 (331)
104 cd03804 GT1_wbaZ_like This fam 99.7 5E-16 1.1E-20 173.5 21.0 245 201-539 84-349 (351)
105 cd04955 GT1_like_6 This family 99.7 9.1E-16 2E-20 171.1 23.1 267 202-544 86-362 (363)
106 cd03802 GT1_AviGT4_like This f 99.7 1E-15 2.3E-20 168.7 23.0 246 193-542 82-332 (335)
107 cd03825 GT1_wcfI_like This fam 99.7 1.2E-15 2.6E-20 170.1 20.4 194 299-545 159-363 (365)
108 PRK05749 3-deoxy-D-manno-octul 99.7 7.5E-15 1.6E-19 168.8 25.8 287 189-545 115-418 (425)
109 PLN02275 transferase, transfer 99.7 4.7E-15 1E-19 167.4 22.0 239 197-510 99-371 (371)
110 COG0297 GlgA Glycogen synthase 99.6 2.5E-14 5.5E-19 163.3 23.8 295 202-546 132-477 (487)
111 PF00534 Glycos_transf_1: Glyc 99.6 2.8E-15 6E-20 149.8 11.3 143 334-513 13-159 (172)
112 cd04950 GT1_like_1 Glycosyltra 99.5 6.7E-13 1.5E-17 150.0 22.6 267 197-546 99-371 (373)
113 COG3769 Predicted hydrolase (H 99.5 1.2E-13 2.6E-18 136.8 13.6 200 589-797 5-230 (274)
114 KOG1111 N-acetylglucosaminyltr 99.5 8.4E-14 1.8E-18 147.4 10.1 187 275-511 146-334 (426)
115 PLN02605 monogalactosyldiacylg 99.4 1.7E-11 3.7E-16 139.1 24.8 191 300-542 174-377 (382)
116 KOG0853 Glycosyltransferase [C 99.3 1.4E-10 3E-15 131.0 18.6 186 336-550 273-467 (495)
117 cd01635 Glycosyltransferase_GT 99.2 1.6E-10 3.6E-15 119.0 15.4 111 341-488 109-220 (229)
118 COG0438 RfaG Glycosyltransfera 99.2 3.9E-10 8.4E-15 122.1 17.7 199 300-547 173-377 (381)
119 PRK13609 diacylglycerol glucos 99.2 2.6E-09 5.6E-14 121.1 25.1 273 182-546 88-371 (380)
120 PRK00726 murG undecaprenyldiph 99.2 8.2E-10 1.8E-14 123.9 19.8 258 192-545 85-356 (357)
121 cd03785 GT1_MurG MurG is an N- 99.2 1.6E-09 3.5E-14 120.9 21.8 249 190-535 81-346 (350)
122 TIGR00236 wecB UDP-N-acetylglu 99.2 3.5E-09 7.5E-14 119.4 23.0 251 187-513 76-335 (365)
123 TIGR01133 murG undecaprenyldip 99.1 2.4E-09 5.1E-14 119.4 18.4 181 302-538 153-346 (348)
124 PRK13608 diacylglycerol glucos 99.1 9.9E-09 2.1E-13 116.9 23.4 168 336-551 203-376 (391)
125 cd03786 GT1_UDP-GlcNAc_2-Epime 99.1 9.6E-09 2.1E-13 115.3 22.3 251 185-514 76-339 (363)
126 TIGR01670 YrbI-phosphatas 3-de 99.0 7.6E-10 1.7E-14 109.1 9.2 73 757-844 76-153 (154)
127 PRK09484 3-deoxy-D-manno-octul 99.0 1.7E-09 3.7E-14 109.8 9.4 125 588-827 18-153 (183)
128 PF13692 Glyco_trans_1_4: Glyc 98.9 3.9E-09 8.4E-14 100.9 7.0 128 336-511 2-134 (135)
129 TIGR02094 more_P_ylases alpha- 98.9 4.1E-07 9E-12 107.9 25.2 182 334-543 387-597 (601)
130 PRK00025 lpxB lipid-A-disaccha 98.8 1.9E-07 4E-12 105.8 20.4 133 335-513 185-342 (380)
131 KOG3189 Phosphomannomutase [Li 98.8 6.6E-08 1.4E-12 94.9 13.6 202 585-797 5-231 (252)
132 PF03332 PMM: Eukaryotic phosp 98.8 3.1E-08 6.6E-13 100.6 11.6 192 617-840 2-219 (220)
133 KOG1387 Glycosyltransferase [C 98.8 1.2E-07 2.7E-12 100.5 15.9 313 177-546 124-458 (465)
134 TIGR02726 phenyl_P_delta pheny 98.8 1.2E-08 2.6E-13 101.7 7.8 140 590-844 6-159 (169)
135 cd01427 HAD_like Haloacid deha 98.8 2.8E-08 6.1E-13 94.1 9.2 55 593-648 1-60 (139)
136 TIGR03713 acc_sec_asp1 accesso 98.7 5.7E-07 1.2E-11 105.4 21.0 272 182-532 203-507 (519)
137 PRK09814 beta-1,6-galactofuran 98.7 3.1E-07 6.7E-12 102.3 18.1 240 193-530 58-315 (333)
138 PRK11133 serB phosphoserine ph 98.7 2.7E-07 5.8E-12 101.6 17.1 66 756-838 247-317 (322)
139 COG1778 Low specificity phosph 98.7 4.9E-08 1.1E-12 92.8 7.3 73 757-844 83-160 (170)
140 COG0546 Gph Predicted phosphat 98.6 2.1E-07 4.5E-12 97.4 9.4 85 735-837 128-218 (220)
141 PRK13226 phosphoglycolate phos 98.5 1.6E-07 3.5E-12 98.9 5.9 66 758-837 153-225 (229)
142 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.4 4.3E-06 9.4E-11 89.6 16.0 59 591-653 1-62 (257)
143 PRK10444 UMP phosphatase; Prov 98.4 4.9E-06 1.1E-10 88.6 16.1 59 591-654 1-59 (248)
144 cd04299 GT1_Glycogen_Phosphory 98.4 2.3E-05 5E-10 95.0 23.6 182 337-546 479-689 (778)
145 PRK13288 pyrophosphatase PpaX; 98.4 9.9E-07 2.2E-11 91.7 9.9 69 757-839 139-213 (214)
146 PF05693 Glycogen_syn: Glycoge 98.4 1.8E-05 4E-10 91.3 20.6 353 153-542 100-577 (633)
147 smart00775 LNS2 LNS2 domain. T 98.4 5E-07 1.1E-11 89.3 6.9 52 593-648 1-66 (157)
148 PRK13225 phosphoglycolate phos 98.3 2.8E-06 6.2E-11 91.7 11.2 70 757-840 196-271 (273)
149 COG0560 SerB Phosphoserine pho 98.3 3.4E-06 7.5E-11 87.5 11.2 42 754-798 141-182 (212)
150 TIGR00215 lpxB lipid-A-disacch 98.3 4.2E-05 9E-10 87.0 20.8 134 335-513 190-348 (385)
151 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.3 4E-06 8.7E-11 89.4 11.6 53 591-648 1-56 (249)
152 PRK13222 phosphoglycolate phos 98.3 9E-07 2E-11 92.6 6.4 80 741-838 138-223 (226)
153 PLN02645 phosphoglycolate phos 98.3 1.9E-05 4E-10 87.2 16.9 71 577-654 16-86 (311)
154 PRK13223 phosphoglycolate phos 98.3 1.2E-06 2.5E-11 94.8 7.1 70 754-837 155-230 (272)
155 TIGR00338 serB phosphoserine p 98.3 7.9E-06 1.7E-10 85.2 13.0 62 757-835 152-218 (219)
156 TIGR01452 PGP_euk phosphoglyco 98.3 8.5E-06 1.9E-10 88.5 13.3 59 591-654 2-60 (279)
157 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.2 1.8E-05 3.9E-10 81.1 13.7 38 757-797 147-184 (201)
158 TIGR01449 PGP_bact 2-phosphogl 98.2 1E-06 2.3E-11 91.2 4.2 64 758-835 143-212 (213)
159 COG1519 KdtA 3-deoxy-D-manno-o 98.2 0.00075 1.6E-08 75.2 26.0 299 183-531 32-404 (419)
160 TIGR01488 HAD-SF-IB Haloacid D 98.2 5.5E-06 1.2E-10 83.1 8.7 41 752-795 137-177 (177)
161 PRK13478 phosphonoacetaldehyde 98.1 2.1E-05 4.6E-10 84.8 12.8 72 758-843 160-261 (267)
162 PLN02770 haloacid dehalogenase 98.1 7.1E-06 1.5E-10 87.5 8.0 77 737-831 149-230 (248)
163 PLN02954 phosphoserine phospha 98.1 3.7E-05 8E-10 80.4 13.1 66 754-836 152-223 (224)
164 TIGR01689 EcbF-BcbF capsule bi 98.0 8E-06 1.7E-10 77.2 6.2 51 592-643 2-55 (126)
165 PF13524 Glyco_trans_1_2: Glyc 98.0 1.3E-05 2.9E-10 71.4 6.6 87 435-541 1-91 (92)
166 PRK06769 hypothetical protein; 98.0 3.8E-05 8.2E-10 77.3 10.5 65 758-836 95-171 (173)
167 TIGR01422 phosphonatase phosph 98.0 1.3E-05 2.8E-10 85.7 7.4 65 758-836 158-252 (253)
168 PRK10826 2-deoxyglucose-6-phos 98.0 4.8E-05 1E-09 79.6 11.0 62 758-833 150-216 (222)
169 PRK08942 D,D-heptose 1,7-bisph 98.0 4.6E-05 9.9E-10 77.2 10.4 66 758-837 105-177 (181)
170 TIGR03351 PhnX-like phosphonat 98.0 6.7E-05 1.4E-09 78.3 12.0 65 758-836 147-219 (220)
171 TIGR02919 accessory Sec system 97.9 0.00011 2.3E-09 84.5 13.7 132 333-514 281-413 (438)
172 PLN02575 haloacid dehalogenase 97.9 5E-05 1.1E-09 85.0 10.4 89 737-843 257-349 (381)
173 PLN03243 haloacid dehalogenase 97.9 0.00012 2.7E-09 78.5 13.0 80 737-835 150-233 (260)
174 PRK11587 putative phosphatase; 97.9 3.4E-05 7.4E-10 80.5 8.4 61 758-832 140-203 (218)
175 TIGR01454 AHBA_synth_RP 3-amin 97.9 3.3E-05 7E-10 79.8 8.0 66 758-837 133-204 (205)
176 PLN02779 haloacid dehalogenase 97.9 3E-05 6.4E-10 84.5 7.6 61 758-832 204-268 (286)
177 PRK09552 mtnX 2-hydroxy-3-keto 97.8 0.00026 5.7E-09 73.9 14.1 66 755-841 146-217 (219)
178 TIGR01684 viral_ppase viral ph 97.8 3.9E-05 8.4E-10 81.9 7.2 56 590-649 125-183 (301)
179 TIGR02253 CTE7 HAD superfamily 97.8 5.4E-05 1.2E-09 78.9 7.8 38 758-798 152-190 (221)
180 TIGR01681 HAD-SF-IIIC HAD-supe 97.7 0.00017 3.8E-09 68.7 9.1 54 592-646 1-64 (128)
181 TIGR00213 GmhB_yaeD D,D-heptos 97.6 0.00024 5.2E-09 71.6 8.3 63 758-833 108-175 (176)
182 PRK06698 bifunctional 5'-methy 97.5 0.00027 6E-09 82.3 9.4 66 758-839 387-456 (459)
183 PRK09449 dUMP phosphatase; Pro 97.5 0.0001 2.2E-09 77.1 4.5 66 758-837 152-223 (224)
184 PLN02940 riboflavin kinase 97.5 0.00054 1.2E-08 77.7 10.8 61 758-832 152-216 (382)
185 PRK14988 GMP/IMP nucleotidase; 97.5 0.0005 1.1E-08 72.1 9.7 69 758-839 151-221 (224)
186 TIGR01656 Histidinol-ppas hist 97.5 0.00048 1E-08 67.3 8.8 38 758-798 103-140 (147)
187 PHA02597 30.2 hypothetical pro 97.5 0.00051 1.1E-08 70.3 9.3 60 758-833 132-195 (197)
188 PHA03398 viral phosphatase sup 97.4 0.00031 6.6E-09 75.2 7.0 56 590-649 127-185 (303)
189 TIGR01261 hisB_Nterm histidino 97.3 0.0012 2.6E-08 65.5 10.0 38 758-798 105-142 (161)
190 PHA02530 pseT polynucleotide k 97.3 0.0028 6.2E-08 69.4 13.7 55 591-646 158-221 (300)
191 TIGR01668 YqeG_hyp_ppase HAD s 97.3 0.0021 4.5E-08 64.5 10.9 48 588-638 22-69 (170)
192 TIGR01990 bPGM beta-phosphoglu 97.2 0.0019 4.1E-08 65.2 9.7 37 758-797 143-179 (185)
193 TIGR01664 DNA-3'-Pase DNA 3'-p 97.1 0.003 6.5E-08 63.1 10.4 48 590-638 12-68 (166)
194 TIGR03333 salvage_mtnX 2-hydro 97.1 0.0098 2.1E-07 61.9 14.7 64 756-840 143-212 (214)
195 COG0647 NagD Predicted sugar p 97.1 0.014 3E-07 62.6 15.9 47 590-641 7-53 (269)
196 TIGR01489 DKMTPPase-SF 2,3-dik 97.1 0.002 4.4E-08 65.0 9.3 40 752-797 144-183 (188)
197 TIGR01525 ATPase-IB_hvy heavy 97.1 0.0019 4.1E-08 77.2 9.9 64 584-648 357-421 (556)
198 PRK10671 copA copper exporting 97.0 0.0033 7.1E-08 78.8 11.5 64 583-647 622-685 (834)
199 PRK10725 fructose-1-P/6-phosph 97.0 0.0009 2E-08 67.8 5.5 37 758-797 144-180 (188)
200 TIGR01549 HAD-SF-IA-v1 haloaci 96.9 0.0017 3.6E-08 63.6 6.4 35 758-796 120-154 (154)
201 PRK11590 hypothetical protein; 96.9 0.0026 5.6E-08 66.1 8.1 26 773-798 173-198 (211)
202 TIGR02009 PGMB-YQAB-SF beta-ph 96.9 0.0013 2.8E-08 66.4 5.5 37 758-797 144-180 (185)
203 TIGR01686 FkbH FkbH-like domai 96.9 0.0078 1.7E-07 66.7 11.8 114 590-796 2-123 (320)
204 TIGR01460 HAD-SF-IIA Haloacid 96.9 0.02 4.4E-07 60.5 14.4 50 594-648 1-53 (236)
205 TIGR01672 AphA HAD superfamily 96.8 0.0018 3.8E-08 68.4 6.1 64 574-638 46-140 (237)
206 PRK10563 6-phosphogluconate ph 96.8 0.00076 1.6E-08 70.4 3.4 38 758-798 144-181 (221)
207 TIGR01512 ATPase-IB2_Cd heavy 96.8 0.0036 7.8E-08 74.4 9.5 59 589-648 340-399 (536)
208 TIGR01459 HAD-SF-IIA-hyp4 HAD- 96.8 0.026 5.6E-07 60.0 15.0 47 590-641 7-53 (242)
209 PF06888 Put_Phosphatase: Puta 96.8 0.029 6.2E-07 59.0 14.7 46 752-797 145-190 (234)
210 TIGR01497 kdpB K+-transporting 96.8 0.0061 1.3E-07 73.5 11.0 67 581-648 416-482 (675)
211 TIGR02254 YjjG/YfnB HAD superf 96.8 0.002 4.4E-08 67.0 6.2 66 758-836 154-224 (224)
212 TIGR01662 HAD-SF-IIIA HAD-supe 96.8 0.0014 3E-08 62.6 4.5 54 592-646 1-67 (132)
213 PF06437 ISN1: IMP-specific 5' 96.8 0.047 1E-06 60.0 16.3 204 571-785 123-378 (408)
214 PLN02919 haloacid dehalogenase 96.7 0.0093 2E-07 76.1 12.3 75 740-832 206-285 (1057)
215 TIGR01511 ATPase-IB1_Cu copper 96.5 0.0099 2.1E-07 71.1 10.3 60 588-648 382-441 (562)
216 TIGR02252 DREG-2 REG-2-like, H 96.5 0.011 2.3E-07 60.8 8.9 37 758-797 162-199 (203)
217 TIGR01522 ATPase-IIA2_Ca golgi 96.4 0.021 4.7E-07 71.9 12.7 164 584-837 496-671 (884)
218 PRK08238 hypothetical protein; 96.4 0.019 4.1E-07 66.9 11.2 34 613-647 74-107 (479)
219 TIGR01548 HAD-SF-IA-hyp1 haloa 96.3 0.0059 1.3E-07 62.5 6.0 34 758-794 163-196 (197)
220 PF00702 Hydrolase: haloacid d 96.3 0.0045 9.7E-08 63.7 5.1 37 611-648 127-163 (215)
221 PRK05446 imidazole glycerol-ph 96.3 0.019 4E-07 64.2 10.2 47 590-637 1-55 (354)
222 PRK11033 zntA zinc/cadmium/mer 96.3 0.017 3.8E-07 71.1 10.5 64 584-648 541-604 (741)
223 TIGR01428 HAD_type_II 2-haloal 96.2 0.016 3.5E-07 59.3 8.3 38 758-798 150-187 (198)
224 TIGR02247 HAD-1A3-hyp Epoxide 96.2 0.044 9.6E-07 56.6 11.4 37 758-797 154-190 (211)
225 TIGR01456 CECR5 HAD-superfamil 96.1 0.37 8.1E-06 53.4 19.3 47 593-644 2-55 (321)
226 PF13344 Hydrolase_6: Haloacid 96.1 0.0016 3.5E-08 59.3 0.5 55 594-653 1-55 (101)
227 COG1011 Predicted hydrolase (H 96.1 0.012 2.7E-07 61.3 6.8 64 759-838 157-228 (229)
228 COG0637 Predicted phosphatase/ 96.0 0.0099 2.1E-07 62.3 5.6 52 740-798 130-181 (221)
229 KOG2941 Beta-1,4-mannosyltrans 95.9 0.16 3.5E-06 55.2 14.3 166 335-544 254-436 (444)
230 TIGR01106 ATPase-IIC_X-K sodiu 95.9 0.028 6.1E-07 71.6 10.1 43 609-655 566-608 (997)
231 PRK01122 potassium-transportin 95.8 0.044 9.6E-07 66.3 10.8 65 583-648 417-481 (679)
232 COG2179 Predicted hydrolase of 95.8 0.032 7E-07 54.5 7.5 59 587-648 24-82 (175)
233 TIGR01993 Pyr-5-nucltdase pyri 95.7 0.02 4.3E-07 57.8 6.5 37 758-797 143-179 (184)
234 TIGR01116 ATPase-IIA1_Ca sarco 95.7 0.032 6.9E-07 70.6 9.5 40 608-648 534-573 (917)
235 PRK14010 potassium-transportin 95.7 0.053 1.2E-06 65.6 10.9 69 579-648 409-477 (673)
236 TIGR01517 ATPase-IIB_Ca plasma 95.7 0.062 1.3E-06 68.3 11.9 138 609-836 577-721 (941)
237 KOG3120 Predicted haloacid deh 95.6 0.092 2E-06 53.6 10.3 45 747-791 153-197 (256)
238 PTZ00445 p36-lilke protein; Pr 95.5 0.028 6.1E-07 57.4 6.2 159 578-798 30-200 (219)
239 PF12710 HAD: haloacid dehalog 95.3 0.031 6.8E-07 56.5 6.2 33 614-647 92-124 (192)
240 PRK11009 aphA acid phosphatase 95.3 0.031 6.6E-07 59.1 6.2 64 574-638 46-140 (237)
241 TIGR01675 plant-AP plant acid 95.1 0.034 7.3E-07 58.2 5.7 56 590-646 76-157 (229)
242 COG4087 Soluble P-type ATPase 95.1 0.032 7E-07 52.1 4.8 54 773-839 90-149 (152)
243 TIGR01657 P-ATPase-V P-type AT 95.1 0.12 2.5E-06 66.6 11.5 47 609-659 654-700 (1054)
244 PRK10517 magnesium-transportin 95.0 0.19 4E-06 63.5 13.0 136 609-836 548-689 (902)
245 PF13242 Hydrolase_like: HAD-h 95.0 0.064 1.4E-06 45.8 6.3 59 759-831 7-74 (75)
246 TIGR01652 ATPase-Plipid phosph 95.0 0.097 2.1E-06 67.4 10.6 185 609-836 629-819 (1057)
247 KOG1615 Phosphoserine phosphat 95.0 0.028 6.1E-07 56.1 4.4 35 757-796 159-193 (227)
248 PRK15122 magnesium-transportin 94.9 0.24 5.2E-06 62.6 13.5 137 609-837 548-690 (903)
249 PF08323 Glyco_transf_5: Starc 94.9 0.098 2.1E-06 55.7 8.6 85 188-273 118-232 (245)
250 TIGR01647 ATPase-IIIA_H plasma 94.7 0.29 6.4E-06 60.7 13.5 167 584-837 410-587 (755)
251 TIGR01524 ATPase-IIIB_Mg magne 94.7 0.24 5.1E-06 62.4 12.8 137 609-837 513-655 (867)
252 COG0763 LpxB Lipid A disacchar 94.5 1.4 3E-05 49.2 16.4 276 177-542 69-376 (381)
253 PF09419 PGP_phosphatase: Mito 94.5 0.064 1.4E-06 53.4 5.5 50 572-626 24-73 (168)
254 TIGR01523 ATPase-IID_K-Na pota 94.4 0.14 2.9E-06 65.7 9.7 148 609-836 644-798 (1053)
255 PRK13582 thrH phosphoserine ph 94.3 0.083 1.8E-06 54.2 6.2 53 775-841 143-200 (205)
256 PF08645 PNK3P: Polynucleotide 94.2 0.036 7.9E-07 54.9 3.1 44 592-636 1-53 (159)
257 TIGR01490 HAD-SF-IB-hyp1 HAD-s 94.2 0.051 1.1E-06 55.7 4.3 42 754-798 152-193 (202)
258 TIGR02137 HSK-PSP phosphoserin 94.1 0.081 1.8E-06 54.6 5.7 64 755-839 130-198 (203)
259 TIGR01494 ATPase_P-type ATPase 94.0 0.25 5.4E-06 58.3 10.4 59 590-649 326-384 (499)
260 PF02684 LpxB: Lipid-A-disacch 94.0 4.1 8.8E-05 46.1 19.3 250 196-515 80-343 (373)
261 TIGR01533 lipo_e_P4 5'-nucleot 94.0 0.054 1.2E-06 58.2 4.2 54 589-643 73-149 (266)
262 PF13439 Glyco_transf_4: Glyco 94.0 0.011 2.5E-07 57.9 -1.0 99 191-314 73-177 (177)
263 COG0474 MgtA Cation transport 93.7 0.36 7.9E-06 61.1 11.4 41 608-649 544-584 (917)
264 TIGR01685 MDP-1 magnesium-depe 93.6 0.11 2.5E-06 52.1 5.4 56 591-647 2-81 (174)
265 PLN03190 aminophospholipid tra 93.5 0.34 7.3E-06 62.7 10.8 39 609-648 724-762 (1178)
266 TIGR01680 Veg_Stor_Prot vegeta 93.5 0.11 2.4E-06 55.4 5.3 50 591-641 101-174 (275)
267 TIGR03492 conserved hypothetic 93.4 1.1 2.3E-05 51.4 13.6 138 336-512 207-364 (396)
268 PF08235 LNS2: LNS2 (Lipin/Ned 93.1 0.14 3.1E-06 50.2 5.0 55 593-648 1-66 (157)
269 KOG0210 P-type ATPase [Inorgan 93.0 0.64 1.4E-05 54.7 10.8 37 756-798 767-803 (1051)
270 TIGR03568 NeuC_NnaA UDP-N-acet 92.7 5.6 0.00012 44.9 18.0 73 414-511 263-338 (365)
271 PF03767 Acid_phosphat_B: HAD 92.2 0.02 4.4E-07 60.2 -2.3 57 589-646 70-149 (229)
272 KOG3040 Predicted sugar phosph 92.2 0.52 1.1E-05 47.8 7.6 60 589-653 5-64 (262)
273 PF02350 Epimerase_2: UDP-N-ac 92.2 13 0.00028 41.7 19.9 259 182-512 52-318 (346)
274 PF13844 Glyco_transf_41: Glyc 92.1 1.2 2.5E-05 51.6 11.5 131 305-456 249-384 (468)
275 PF11019 DUF2608: Protein of u 91.8 2.2 4.8E-05 45.6 12.5 56 753-818 158-213 (252)
276 TIGR01663 PNK-3'Pase polynucle 91.4 0.24 5.2E-06 58.3 5.1 50 589-639 166-224 (526)
277 smart00577 CPDc catalytic doma 90.6 0.42 9.1E-06 46.6 5.2 56 591-648 2-80 (148)
278 cd03784 GT1_Gtf_like This fami 89.9 21 0.00045 40.5 19.3 73 415-511 290-371 (401)
279 PRK13582 thrH phosphoserine ph 88.4 0.5 1.1E-05 48.4 4.1 33 614-648 71-103 (205)
280 COG3882 FkbH Predicted enzyme 88.0 1.3 2.9E-05 50.3 7.2 74 578-652 209-295 (574)
281 PF12689 Acid_PPase: Acid Phos 87.9 3.3 7.2E-05 41.4 9.4 84 705-797 61-145 (169)
282 TIGR01545 YfhB_g-proteo haloac 87.9 1.3 2.8E-05 46.0 6.8 23 776-798 175-197 (210)
283 PF05152 DUF705: Protein of un 87.3 1.9 4.1E-05 46.2 7.5 58 590-648 121-178 (297)
284 COG0241 HisB Histidinol phosph 87.2 0.67 1.5E-05 46.7 4.0 38 758-798 107-144 (181)
285 COG0381 WecB UDP-N-acetylgluco 87.0 59 0.0013 36.7 21.8 137 336-515 205-344 (383)
286 COG0707 MurG UDP-N-acetylgluco 86.8 14 0.00031 41.6 14.7 146 335-530 182-340 (357)
287 TIGR01426 MGT glycosyltransfer 86.0 9.3 0.0002 43.4 13.1 98 415-538 277-384 (392)
288 PF03031 NIF: NLI interacting 85.5 0.64 1.4E-05 45.7 2.9 56 592-649 1-72 (159)
289 TIGR01490 HAD-SF-IB-hyp1 HAD-s 85.2 1.7 3.8E-05 44.2 6.1 35 613-648 89-123 (202)
290 KOG0208 Cation transport ATPas 84.9 2.3 5E-05 52.3 7.5 87 564-661 663-751 (1140)
291 COG4030 Uncharacterized protei 84.8 3.2 7E-05 42.7 7.4 38 757-798 191-228 (315)
292 COG2217 ZntA Cation transport 84.7 1.3 2.8E-05 54.1 5.5 90 723-837 541-652 (713)
293 PF13579 Glyco_trans_4_4: Glyc 84.5 1.5 3.2E-05 41.9 4.9 68 201-273 74-146 (160)
294 KOG0202 Ca2+ transporting ATPa 84.3 9 0.0002 46.7 11.9 55 586-648 566-620 (972)
295 PF07429 Glyco_transf_56: 4-al 84.2 9.3 0.0002 42.3 11.2 139 337-510 187-331 (360)
296 TIGR02245 HAD_IIID1 HAD-superf 83.5 2.1 4.4E-05 43.9 5.6 57 589-647 19-79 (195)
297 KOG0206 P-type ATPase [General 83.4 4.1 8.8E-05 52.0 9.1 36 756-797 780-815 (1151)
298 PRK10748 flavin mononucleotide 82.9 0.72 1.6E-05 48.7 2.1 38 758-798 165-203 (238)
299 TIGR03590 PseG pseudaminic aci 82.8 5 0.00011 43.6 8.7 92 335-457 170-261 (279)
300 TIGR02137 HSK-PSP phosphoserin 82.3 1.6 3.4E-05 45.1 4.3 36 612-649 69-104 (203)
301 PF06941 NT5C: 5' nucleotidase 81.4 1.1 2.4E-05 45.6 2.7 28 612-640 74-101 (191)
302 TIGR02251 HIF-SF_euk Dullard-l 81.1 2.5 5.4E-05 41.9 5.1 56 591-648 1-77 (162)
303 KOG3109 Haloacid dehalogenase- 80.7 4 8.6E-05 42.1 6.3 106 709-839 117-230 (244)
304 PRK10748 flavin mononucleotide 80.6 3 6.6E-05 44.0 5.9 15 590-604 9-23 (238)
305 PLN02811 hydrolase 80.5 2.4 5.2E-05 44.1 5.0 38 758-798 139-179 (220)
306 TIGR02250 FCP1_euk FCP1-like p 80.0 3 6.5E-05 41.1 5.2 60 588-649 3-94 (156)
307 COG3700 AphA Acid phosphatase 79.7 3.4 7.3E-05 41.0 5.2 71 575-645 47-147 (237)
308 TIGR01545 YfhB_g-proteo haloac 79.3 2.3 5E-05 44.1 4.3 15 590-604 4-18 (210)
309 TIGR01544 HAD-SF-IE haloacid d 78.7 1.8 4E-05 46.7 3.4 38 755-795 190-230 (277)
310 PF13419 HAD_2: Haloacid dehal 77.6 4.1 8.8E-05 39.7 5.4 38 758-798 135-172 (176)
311 TIGR01662 HAD-SF-IIIA HAD-supe 76.7 2.6 5.6E-05 39.9 3.5 38 758-798 87-126 (132)
312 KOG3742 Glycogen synthase [Car 75.5 36 0.00079 38.7 12.2 190 303-511 278-577 (692)
313 PRK09456 ?-D-glucose-1-phospha 75.0 5.7 0.00012 40.5 5.8 37 758-797 143-179 (199)
314 KOG0204 Calcium transporting A 74.3 11 0.00024 46.1 8.4 39 610-649 646-684 (1034)
315 COG4359 Uncharacterized conser 74.2 4.9 0.00011 40.2 4.7 39 752-797 142-180 (220)
316 COG0816 Predicted endonuclease 73.5 20 0.00043 34.7 8.6 73 353-435 40-112 (141)
317 TIGR01509 HAD-SF-IA-v3 haloaci 72.0 4.7 0.0001 40.0 4.2 37 758-797 142-178 (183)
318 KOG0203 Na+/K+ ATPase, alpha s 71.3 8.5 0.00018 46.9 6.6 42 612-657 591-632 (1019)
319 PRK09456 ?-D-glucose-1-phospha 69.9 5.3 0.00011 40.8 4.1 13 592-604 1-13 (199)
320 TIGR01493 HAD-SF-IA-v2 Haloaci 68.6 1.9 4E-05 42.9 0.5 34 758-794 141-174 (175)
321 KOG2884 26S proteasome regulat 66.9 93 0.002 32.2 11.9 48 474-525 186-238 (259)
322 KOG2116 Protein involved in pl 65.7 6.6 0.00014 46.4 4.1 110 555-666 494-615 (738)
323 COG5083 SMP2 Uncharacterized p 64.4 3.5 7.7E-05 46.2 1.6 53 588-644 372-435 (580)
324 PRK14986 glycogen phosphorylas 64.2 1.3E+02 0.0029 37.4 14.9 136 335-488 542-681 (815)
325 COG4996 Predicted phosphatase 63.4 12 0.00027 35.3 4.6 54 592-646 1-75 (164)
326 PRK02797 4-alpha-L-fucosyltran 63.0 83 0.0018 34.6 11.5 124 336-494 146-272 (322)
327 TIGR01691 enolase-ppase 2,3-di 63.0 16 0.00035 38.1 6.2 38 758-798 154-191 (220)
328 TIGR01685 MDP-1 magnesium-depe 62.6 13 0.00028 37.4 5.2 41 757-797 108-151 (174)
329 COG3914 Spy Predicted O-linked 60.0 60 0.0013 38.4 10.3 95 345-456 437-531 (620)
330 KOG2134 Polynucleotide kinase 59.2 7.4 0.00016 43.4 2.8 48 589-637 73-129 (422)
331 KOG1618 Predicted phosphatase 58.0 8.4 0.00018 41.8 2.9 42 591-636 35-79 (389)
332 PF00343 Phosphorylase: Carboh 56.4 2.6E+02 0.0057 34.4 15.4 133 335-488 443-582 (713)
333 cd04300 GT1_Glycogen_Phosphory 56.4 2.1E+02 0.0045 35.8 14.7 137 334-488 528-668 (797)
334 PRK14089 ipid-A-disaccharide s 56.2 3E+02 0.0065 30.9 15.1 27 426-457 229-255 (347)
335 COG2503 Predicted secreted aci 54.6 10 0.00022 39.7 2.8 58 588-646 76-157 (274)
336 TIGR01493 HAD-SF-IA-v2 Haloaci 53.2 11 0.00023 37.3 2.8 24 593-623 1-24 (175)
337 PF12000 Glyco_trans_4_3: Gkyc 51.4 1.1E+02 0.0024 30.7 9.5 49 178-230 42-94 (171)
338 TIGR01672 AphA HAD superfamily 51.1 25 0.00054 37.2 5.2 29 779-818 187-215 (237)
339 COG4087 Soluble P-type ATPase 50.0 14 0.0003 35.1 2.7 48 594-647 17-64 (152)
340 PF06258 Mito_fiss_Elm1: Mitoc 49.5 75 0.0016 35.1 8.8 100 335-457 146-250 (311)
341 smart00577 CPDc catalytic doma 49.2 7.1 0.00015 38.0 0.7 33 762-797 104-136 (148)
342 KOG0207 Cation transport ATPas 49.1 24 0.00053 43.6 5.2 68 747-837 765-838 (951)
343 PF04312 DUF460: Protein of un 48.9 13 0.00029 35.5 2.4 54 591-648 43-98 (138)
344 PF00702 Hydrolase: haloacid d 48.9 6.2 0.00013 40.2 0.2 34 760-796 182-215 (215)
345 KOG2882 p-Nitrophenyl phosphat 48.8 13 0.00028 40.3 2.6 61 589-654 20-80 (306)
346 PF13528 Glyco_trans_1_3: Glyc 48.3 3.9E+02 0.0084 28.9 15.1 66 422-508 240-316 (318)
347 COG4641 Uncharacterized protei 47.4 59 0.0013 36.5 7.5 112 416-546 241-361 (373)
348 PF13477 Glyco_trans_4_2: Glyc 44.8 33 0.00071 32.2 4.6 40 191-232 67-107 (139)
349 COG1168 MalY Bifunctional PLP- 44.2 4.8E+02 0.01 29.6 13.8 91 355-452 147-241 (388)
350 PRK04128 1-(5-phosphoribosyl)- 43.2 68 0.0015 33.7 7.0 61 578-646 31-92 (228)
351 TIGR00250 RNAse_H_YqgF RNAse H 41.8 1.4E+02 0.0031 28.4 8.3 71 353-433 35-105 (130)
352 KOG2914 Predicted haloacid-hal 41.4 38 0.00083 35.4 4.7 33 763-798 158-191 (222)
353 PRK00109 Holliday junction res 40.5 2.3E+02 0.005 27.3 9.6 71 354-434 42-112 (138)
354 PF12710 HAD: haloacid dehalog 40.4 14 0.00031 36.9 1.4 36 757-793 157-192 (192)
355 PF09949 DUF2183: Uncharacteri 40.0 67 0.0015 29.2 5.5 35 352-390 49-83 (100)
356 PRK14985 maltodextrin phosphor 38.4 3E+02 0.0064 34.4 12.1 136 335-488 528-667 (798)
357 KOG3085 Predicted hydrolase (H 37.6 35 0.00076 36.0 3.7 37 759-798 171-208 (237)
358 COG2179 Predicted hydrolase of 36.4 40 0.00087 33.5 3.6 52 758-825 95-147 (175)
359 PRK11009 aphA acid phosphatase 36.3 57 0.0012 34.5 5.1 29 779-818 187-215 (237)
360 COG3660 Predicted nucleoside-d 35.4 3.1E+02 0.0067 29.6 10.0 51 202-269 72-122 (329)
361 KOG1050 Trehalose-6-phosphate 35.1 3.4 7.5E-05 50.5 -4.7 52 745-796 369-423 (732)
362 PLN02177 glycerol-3-phosphate 33.6 47 0.001 39.2 4.3 34 758-798 177-210 (497)
363 COG0058 GlgP Glucan phosphoryl 33.0 3.9E+02 0.0084 33.2 11.8 130 335-488 486-616 (750)
364 COG4822 CbiK Cobalamin biosynt 31.8 6.2E+02 0.013 26.4 14.8 155 235-435 33-193 (265)
365 smart00775 LNS2 LNS2 domain. T 30.7 1E+02 0.0022 30.3 5.6 40 757-798 102-141 (157)
366 COG2248 Predicted hydrolase (m 30.3 7.1E+02 0.015 26.7 11.7 182 176-404 46-240 (304)
367 PHA03392 egt ecdysteroid UDP-g 29.9 5E+02 0.011 30.8 12.2 127 336-513 297-433 (507)
368 PF10933 DUF2827: Protein of u 29.3 3.1E+02 0.0067 30.9 9.4 155 335-528 189-345 (364)
369 PRK05632 phosphate acetyltrans 27.4 1.2E+03 0.027 28.6 19.5 176 419-646 232-418 (684)
370 PRK13587 1-(5-phosphoribosyl)- 27.2 1.9E+02 0.0042 30.4 7.3 61 578-646 32-95 (234)
371 TIGR00661 MJ1255 conserved hyp 26.6 74 0.0016 35.0 4.3 66 424-511 239-313 (321)
372 KOG4626 O-linked N-acetylgluco 26.4 4.8E+02 0.01 31.6 10.5 85 351-455 772-857 (966)
373 cd03309 CmuC_like CmuC_like. P 26.0 6.2E+02 0.013 28.0 11.3 27 180-208 151-177 (321)
374 PRK14057 epimerase; Provisiona 26.0 4.7E+02 0.01 28.0 9.8 66 372-441 157-223 (254)
375 PF12038 DUF3524: Domain of un 25.7 1.3E+02 0.0028 30.0 5.1 79 201-280 60-143 (168)
376 COG0241 HisB Histidinol phosph 25.3 75 0.0016 32.2 3.6 46 591-637 5-56 (181)
377 KOG2670 Enolase [Carbohydrate 25.3 55 0.0012 35.7 2.7 41 138-188 272-312 (433)
378 KOG0331 ATP-dependent RNA heli 25.0 3.7E+02 0.0081 31.8 9.6 94 339-442 131-225 (519)
379 TIGR02093 P_ylase glycogen/sta 24.6 4.3E+02 0.0094 33.0 10.4 136 335-488 526-665 (794)
380 KOG4549 Magnesium-dependent ph 24.2 1.2E+02 0.0026 28.7 4.4 49 591-640 18-72 (144)
381 PF09419 PGP_phosphatase: Mito 23.3 1.7E+02 0.0038 29.2 5.7 42 756-797 114-158 (168)
382 PRK09722 allulose-6-phosphate 22.9 6.1E+02 0.013 26.7 9.9 65 372-440 133-198 (229)
383 COG4359 Uncharacterized conser 22.7 53 0.0011 33.2 1.8 37 611-648 73-109 (220)
384 PRK08091 ribulose-phosphate 3- 21.8 6.4E+02 0.014 26.5 9.8 66 372-441 143-209 (228)
385 COG1819 Glycosyl transferases, 21.5 6.7E+02 0.015 28.7 10.9 102 415-544 286-398 (406)
No 1
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=1.9e-191 Score=1710.62 Aligned_cols=843 Identities=70% Similarity=1.209 Sum_probs=795.7
Q ss_pred CccccccchhhhccCCCCCCCCcccccccccccccccccccccccccCCCCCCCC-CCCCCCeEEEEEcCCccceeecCC
Q 003024 1 MMSKSYTNLLDLASGNFPAMGPSREKKRLPRVMTVPGVISELDDDQANSVSSDVP-SSVAQDRVIIVANQLPVKAKRRPD 79 (856)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~iivsnrlP~~~~~~~~ 79 (856)
|+||||+|||||++|++..++ ++.+++|++|++||+++++++++.++.+++.+ +..+.+|+||||||||+.++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~ 78 (854)
T PLN02205 1 MVSRSYSNLLELASGESPSFG--RMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSD 78 (854)
T ss_pred CcChhhccHHHhccCCccccc--ccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCC
Confidence 899999999999999999999 88999999999999999999988877777666 566778999999999999998755
Q ss_pred C-CCeEEEecCCchHHhhhccCCC-CCceEEEEccCCCCCcchhhhHHHhhccCeeEEEeeCChhhhhhHhhcccccccc
Q 003024 80 N-KGWSFSWDEDSLLLQLKDGLPE-DMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLPPDILTKFYHGFCKQHLW 157 (856)
Q Consensus 80 ~-~~~~~~~~~~~l~~~l~~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~gf~~~~lW 157 (856)
+ ++|+|+|++|||+++|++++.. ..+++||||++.++++++|+++.+.++++|+|+||||+++++++||+||||++||
T Consensus 79 g~~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LW 158 (854)
T PLN02205 79 GSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLW 158 (854)
T ss_pred CCcceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhcccc
Confidence 4 7899999999999999988864 3789999999998888889888888888999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCC
Q 003024 158 PLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPS 237 (856)
Q Consensus 158 pl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~ 237 (856)
|+|||+++..|+++.+|+++.|++|++||++||++|++.++|++|+|||||||||+||+|||+++|+++||||||||||+
T Consensus 159 PlfH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs 238 (854)
T PLN02205 159 PLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 238 (854)
T ss_pred chhccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCC
Confidence 99999988888777799999999999999999999999999867999999999999999999999999999999999999
Q ss_pred hHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHh
Q 003024 238 SEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVL 317 (856)
Q Consensus 238 ~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~ 317 (856)
+|+||+||||+|||+|||+||+|||||++|+|||++||+|+||+++..++|+++++|+||+++|+++|+|||++.|...+
T Consensus 239 ~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~ 318 (854)
T PLN02205 239 SEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVL 318 (854)
T ss_pred hHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999888889999999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHcC--CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHH
Q 003024 318 RLADKDWRVQELKQQFE--GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEI 395 (856)
Q Consensus 318 ~~~~~~~~~~~l~~~~~--~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~ 395 (856)
..+++..++++++++++ |+++|+||||||++|||.+||+|||+||++||+|+||++||||++|+|+++++|+++++++
T Consensus 319 ~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev 398 (854)
T PLN02205 319 SLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAET 398 (854)
T ss_pred cChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHH
Confidence 99999999999999995 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCC--CCC
Q 003024 396 HATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSA--PKK 473 (856)
Q Consensus 396 ~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~--~~~ 473 (856)
+++|+|||++||+.+|+||+|+.+.++++|+.|||++||||++||+|||||||++||+|||++++.++++++..+ +++
T Consensus 399 ~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~ 478 (854)
T PLN02205 399 HSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKK 478 (854)
T ss_pred HHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999998877777666554 479
Q ss_pred ceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhhcc
Q 003024 474 SMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKDHFK 553 (856)
Q Consensus 474 g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~ 553 (856)
|+||+|||+||+++|++|++|||||++++|+||++||+|+++||+.||++++++|++||+.+|+++|+++|+++|+++++
T Consensus 479 gvLiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~ 558 (854)
T PLN02205 479 SMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSR 558 (854)
T ss_pred CceEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred ccccccCcccceeEeecCcccccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEE
Q 003024 554 RRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFV 633 (856)
Q Consensus 554 ~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I 633 (856)
++||++|||++||+++++|+|++|+++.++++|+++++|+|++||||||++..+....|+++++++|++||.++|+.|+|
T Consensus 559 ~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaI 638 (854)
T PLN02205 559 RRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFI 638 (854)
T ss_pred hhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999855445689999999999999999999999
Q ss_pred ecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeee
Q 003024 634 VSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHR 713 (856)
Q Consensus 634 ~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~ 713 (856)
+|||++..+++||+.+++++++|+||++++++++..|+......+..|++.+..+++.|++++||+++|.|+++++|||+
T Consensus 639 vSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR 718 (854)
T PLN02205 639 VSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYE 718 (854)
T ss_pred EeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehh
Confidence 99999999999999887899999999999998888897665445678999999999999999999999999999999999
Q ss_pred cCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHH
Q 003024 714 DADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFE 793 (856)
Q Consensus 714 ~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~ 793 (856)
++||+++.++++++.++++..+.+.++.+.+|+.++||+|+++|||.|++.+++++...|+++|+++||||+.||++||+
T Consensus 719 ~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~ 798 (854)
T PLN02205 719 DADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFE 798 (854)
T ss_pred hCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHH
Confidence 99999999999999999999988888899999999999999999999999998765444889999999999999999999
Q ss_pred HccccccCCCCCCCccEEEEEeCCCccccceEcCChhHHHHHHHHHHHhcCC
Q 003024 794 IIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEALAEASAP 845 (856)
Q Consensus 794 ~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~~~~eV~~~L~~L~~~~~~ 845 (856)
.++....+..++..++.|+|+||.++|+|+|+|+++++|.++|+.|++.+.+
T Consensus 799 ~~~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~~~~ 850 (854)
T PLN02205 799 VITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASVSEQ 850 (854)
T ss_pred HhhhhccCCcccccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhcchh
Confidence 9985444556777788899999999999999999999999999999987654
No 2
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=3.4e-159 Score=1419.69 Aligned_cols=747 Identities=36% Similarity=0.689 Sum_probs=671.4
Q ss_pred CCeEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCcc-hhhhHHHhhccCeeEEEee
Q 003024 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS-EQDDVSQLLLDRFKCVPAF 138 (856)
Q Consensus 60 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv~ 138 (856)
++|+||||||||+.++++++ |.|.++++.|||+++|.+ + +..+++||||+|..++.+ +++.+... +.+|+|+|||
T Consensus 93 ~~rlIiVSNRlPv~~~~~~~-g~~~~~~s~GGLvsaL~~-~-~~~~~~WVGw~g~~~~~~~~~~~~~~~-l~~~~~~pV~ 168 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRGE-DSWSLEISAGGLVSALLG-V-KEFEARWIGWAGVNVPDEVGQKALTKA-LAEKRCIPVF 168 (934)
T ss_pred CCCEEEEECCCCcceeecCC-CceEEeECCCCcHHHhcc-c-ccCCeEEEeeCCCCCCCcchhHHHHHH-hccCceEEEe
Confidence 68999999999999988654 789999999999999975 5 568999999999877653 45555444 5789999999
Q ss_pred CChhhhhhHhhccccccccccccccC-CCCCC-CCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHH
Q 003024 139 LPPDILTKFYHGFCKQHLWPLFHYML-PFSAT-HGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPT 216 (856)
Q Consensus 139 l~~~~~~~~y~gf~~~~lWpl~H~~~-~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~ 216 (856)
|+++++++||+||||++|||+|||+. +..+. ...+|+++.|++|++||++||++|++.++|+ |+|||||||||+||.
T Consensus 169 l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~g-D~VWVHDYHL~LlP~ 247 (934)
T PLN03064 169 LDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEG-DVVWCHDYHLMFLPK 247 (934)
T ss_pred CCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhHHHH
Confidence 99999999999999999999999973 21110 1146889999999999999999999999985 999999999999999
Q ss_pred HHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECC
Q 003024 217 FLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYG 296 (856)
Q Consensus 217 ~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~g 296 (856)
|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|+|||++||+|+||++... .++.++|
T Consensus 248 ~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~----~~v~~~G 323 (934)
T PLN03064 248 CLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGVEDQG 323 (934)
T ss_pred HHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccC----CeEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999998543 2589999
Q ss_pred EEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEE
Q 003024 297 RTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ 376 (856)
Q Consensus 297 r~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 376 (856)
|.++|.++|+|||++.|...+..+++.+++++++++|+|+++||||||||++|||.+||+||++||++||+|++||||||
T Consensus 324 r~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQ 403 (934)
T PLN03064 324 RLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQ 403 (934)
T ss_pred EEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeee
Q 003024 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (856)
Q Consensus 377 i~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 456 (856)
|++|+|+++++|+++++++.++|++||++||+.+|+||+|+.+.++++|+.|+|++|||||+||+|||||||++||||||
T Consensus 404 Ia~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~ 483 (934)
T PLN03064 404 IAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (934)
T ss_pred EcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCCCCCCCCCCceEEecCCccccccc-CCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHH
Q 003024 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAY 535 (856)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 535 (856)
.+ ++|+||+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+.+
T Consensus 484 ~~-------------~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~ 550 (934)
T PLN03064 484 DS-------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQE 550 (934)
T ss_pred cC-------------CCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHH
Confidence 74 48999999999999999 58999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCcccceeEeecCcccccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCCC-------
Q 003024 536 WARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSI------- 608 (856)
Q Consensus 536 W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~------- 608 (856)
|+++|+.+|.++..++.. ++. . -+.+|+.+.+.++|++++.++||+||||||++..+.
T Consensus 551 Wa~~fl~~L~~~~~~~~~-~~~-----------~---~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~ 615 (934)
T PLN03064 551 WAETFVSELNDTVVEAQL-RTR-----------Q---VPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQ 615 (934)
T ss_pred HHHHHHHHHHHHHhhhhc-ccc-----------c---cCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCccccccc
Confidence 999999999998655421 111 1 124799999999999999999999999999985432
Q ss_pred ----CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEe-cCCCCcccHHH
Q 003024 609 ----NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQN-CGQSVDFGWIQ 683 (856)
Q Consensus 609 ----~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~-~~~~~~~~w~~ 683 (856)
...|+++++++|++||.++++.|+|+|||+...+++||+.+ +++++|+||++++.++ ..|.. .....+.+|++
T Consensus 616 ~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~~-~~w~~~~~~~~~~~W~~ 693 (934)
T PLN03064 616 IKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHTK-GEWMTTMPEHLNMDWVD 693 (934)
T ss_pred ccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecCC-CcceeccccccchHHHH
Confidence 23478999999999999999999999999999999999887 7999999999998764 47873 33334668999
Q ss_pred HHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHH-HHHhcCCCeEEEEcCeEEEEEeCCCCHHHHH
Q 003024 684 IAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHL-ESVLANEPAAVKSGQFIVEVKPQGVSKGVVA 762 (856)
Q Consensus 684 ~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L-~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al 762 (856)
.+.+++++|++++||+++|.|+++++|||+.+||+++..|++++.+++ ...+.+.++.+..|+.++||+|.++|||.|+
T Consensus 694 ~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av 773 (934)
T PLN03064 694 SVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAI 773 (934)
T ss_pred HHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999999 4455667799999999999999999999999
Q ss_pred HHHHHHhhhcC---CCcceEEEEeCCch-hHHHHHHccccccC--------------------------------C----
Q 003024 763 EKIFTTMAESG---RHADFVLCIGDDRS-DEDMFEIIGNATSS--------------------------------G---- 802 (856)
Q Consensus 763 ~~Ll~~l~~~g---i~~d~vlaiGD~~N-D~~Mf~~ag~~~~~--------------------------------~---- 802 (856)
+.|++++...+ .++|||+|+||+.. ||+||+++...... .
T Consensus 774 ~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (934)
T PLN03064 774 DRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKNSQ 853 (934)
T ss_pred HHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccccc
Confidence 99999763222 35899999999875 99999998642110 0
Q ss_pred -----CC-------------------------------CCCccEEEEEeCCCccccceEcCChhHHHHHHHHHHHhcCC
Q 003024 803 -----VL-------------------------------SSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEALAEASAP 845 (856)
Q Consensus 803 -----~~-------------------------------~~~~~~~av~vG~~~s~A~y~l~~~~eV~~~L~~L~~~~~~ 845 (856)
.. -...+.|+|+||.+.|.|+|++++.+||+.+|+.|++.+..
T Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (934)
T PLN03064 854 GKKQRSLLSSAKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASSS 932 (934)
T ss_pred cccCCcccccccccccccccCCccccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhccccC
Confidence 00 01235699999999999999999999999999999987653
No 3
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=1.4e-151 Score=1367.39 Aligned_cols=752 Identities=36% Similarity=0.682 Sum_probs=670.6
Q ss_pred CCCCeEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCcc-hhhhHHHhhccCeeEEE
Q 003024 58 VAQDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLS-EQDDVSQLLLDRFKCVP 136 (856)
Q Consensus 58 ~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~p 136 (856)
..++|+||||||||+.+.+++ +|+|+|+++.|||+.+|.+ + ...+++||||+|.+++++ ++..+.. .+.+|+|+|
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~-~~~~~~~~~~ggl~~al~~-~-~~~~~~Wvgw~g~~~~~~~~~~~~~~-~~~~~~~~p 83 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTG-EDSWSLEMSPGGLVSALLG-V-KEFETKWIGWPGVDVHDEIGKAALTE-SLAEKGCIP 83 (797)
T ss_pred cCCCCEEEEECCCCccceecC-CCceEEeeCCCCHHHHHHH-H-HhcCceEEEeCCCcCCcccchhHHHH-HhhcCCeEE
Confidence 457899999999999988764 4789999999999999975 4 457999999999876654 3444443 467899999
Q ss_pred eeCChhhhhhHhhcccccccccccccc-CCCCCC-CCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchH
Q 003024 137 AFLPPDILTKFYHGFCKQHLWPLFHYM-LPFSAT-HGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVL 214 (856)
Q Consensus 137 v~l~~~~~~~~y~gf~~~~lWpl~H~~-~~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~ll 214 (856)
||| ++++++||+||||++|||+|||+ .+..+. ...+|+++.|++|++||++||++|++.++|+ |+|||||||||+|
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-d~vWvhDYhL~ll 161 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEG-DVVWCHDYHLMFL 161 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhhH
Confidence 999 99999999999999999999998 332222 1146677899999999999999999999985 9999999999999
Q ss_pred HHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEE
Q 003024 215 PTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEY 294 (856)
Q Consensus 215 p~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~ 294 (856)
|+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|+|||++||+|++|+++... .+.+
T Consensus 162 p~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i~~ 237 (797)
T PLN03063 162 PQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVD 237 (797)
T ss_pred HHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999876432 4789
Q ss_pred CCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEE
Q 003024 295 YGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVL 374 (856)
Q Consensus 295 ~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvL 374 (856)
+||.++|.++|+|||++.|.+....+++.....+++++++++++|++|||||+.|||.++|+||++||++||+++++++|
T Consensus 238 ~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvL 317 (797)
T PLN03063 238 QGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVML 317 (797)
T ss_pred CCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEE
Confidence 99999999999999999999887777777888889999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceee
Q 003024 375 VQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIV 454 (856)
Q Consensus 375 vqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a 454 (856)
|||+.|+|+++++|+++++++++++++||.+||+.+|.||+++.+.++.+++.++|++|||||+||++||||||++||||
T Consensus 318 vqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA 397 (797)
T PLN03063 318 VQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVA 397 (797)
T ss_pred EEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCCCCCCCCCCCceEEecCCccccccc-CCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCH
Q 003024 455 CRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDV 533 (856)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 533 (856)
|+.+ ++|++|+|||+|+++++ .+|++|||||++++|+||.++|+|+++||+.|+++++++|.+||+
T Consensus 398 ~g~p-------------~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~ 464 (797)
T PLN03063 398 CQKA-------------KKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSA 464 (797)
T ss_pred eecC-------------CCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCH
Confidence 9873 47899999999999999 489999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccCcccceeEeecCcccccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCC-----C
Q 003024 534 AYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTS-----I 608 (856)
Q Consensus 534 ~~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~-----~ 608 (856)
.+|+++|+++|.++++++..+. ...+.+|+.+.+..+|+++++++|++||||||++..+ .
T Consensus 465 ~~Wa~~fl~~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~ 529 (797)
T PLN03063 465 QKWADDFMSELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEM 529 (797)
T ss_pred HHHHHHHHHHHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccccc
Confidence 9999999999999887653211 1234579999999999999999999999999998543 2
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecC-CCCcccHHHHHHH
Q 003024 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCG-QSVDFGWIQIAEP 687 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~-~~~~~~w~~~v~~ 687 (856)
...|+++++++|++|+.++++.|+|+|||+.+.+++|++.+ +++++|+||++++.. +..|.... ...+.+|++.+.+
T Consensus 530 ~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~~v~~ 607 (797)
T PLN03063 530 DLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVDGVKN 607 (797)
T ss_pred cCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHHHHHH
Confidence 24589999999999999999999999999999999999875 799999999999865 45787543 2345789999999
Q ss_pred HHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHH-HhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHH
Q 003024 688 VMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLES-VLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIF 766 (856)
Q Consensus 688 i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~-~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll 766 (856)
+++.|++++||+++|.|+++++|||+.+||+++..++.++.+++.+ .+.+.++.+..|+..+||+|.++|||.|++.++
T Consensus 608 ~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll 687 (797)
T PLN03063 608 VFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRIL 687 (797)
T ss_pred HHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHH
Confidence 9999999999999999999999999999999998999999999844 456667999999999999999999999999999
Q ss_pred HHhhhc---CCCcceEEEEeCCc-hhHHHHHHccccccC--------C-----------CCCCCccEEEEEeCCCccccc
Q 003024 767 TTMAES---GRHADFVLCIGDDR-SDEDMFEIIGNATSS--------G-----------VLSSNASVFACTVGQKPSKAK 823 (856)
Q Consensus 767 ~~l~~~---gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~--------~-----------~~~~~~~~~av~vG~~~s~A~ 823 (856)
+++... +..+|+|+|+||+. .||+||+++...... . .....+++|+|+||.++|+|+
T Consensus 688 ~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~~s~A~ 767 (797)
T PLN03063 688 GEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQARTKAR 767 (797)
T ss_pred HHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECCCCccCe
Confidence 976321 23679999999984 699999998742100 0 012356789999999999999
Q ss_pred eEcCChhHHHHHHHHHHHhcCCCCCC
Q 003024 824 YYLDDAAEVVTMLEALAEASAPPSFE 849 (856)
Q Consensus 824 y~l~~~~eV~~~L~~L~~~~~~~~~~ 849 (856)
|||++++||.++|+.|++........
T Consensus 768 y~l~~~~eV~~lL~~l~~~~~~~~~~ 793 (797)
T PLN03063 768 YVLDSSNDVVSLLHKLAVANTTMTDS 793 (797)
T ss_pred ecCCCHHHHHHHHHHHhccCcccccc
Confidence 99999999999999999877665433
No 4
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=2.7e-142 Score=1290.76 Aligned_cols=720 Identities=35% Similarity=0.667 Sum_probs=658.4
Q ss_pred CeEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCc---chhhhHHHhhccCeeEEEe
Q 003024 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDL---SEQDDVSQLLLDRFKCVPA 137 (856)
Q Consensus 61 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~---~~~~~~~~~~~~~~~~~pv 137 (856)
+|+||||||||+.+++++ |+|+++++.|||+.+|.+.+. ..+++||||+|.+.+. +++.++. ..+.+|+|+||
T Consensus 1 ~~livvsnr~p~~~~~~~--~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~v 76 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED--GGVELTPSVGGLATGLRSFHE-RGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVPV 76 (726)
T ss_pred CCEEEEEcCCCcceeecC--CceEEeeCCCchHHHHHHHhh-cCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEEE
Confidence 489999999999988764 589999999999999987654 5899999999987554 2233333 34678999999
Q ss_pred eCChhhhhhHhhccccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHH
Q 003024 138 FLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTF 217 (856)
Q Consensus 138 ~l~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~ 217 (856)
||++++++.||+||||++|||+|||+.+. ..|++++|++|++||++||++|++.++|+ |+|||||||||+||.+
T Consensus 77 ~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~~-d~vwvhDYhl~l~p~~ 150 (726)
T PRK14501 77 FLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARPG-DVVWVHDYQLMLLPAM 150 (726)
T ss_pred eCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeCchhhhHHHH
Confidence 99999999999999999999999999765 48999999999999999999999999985 9999999999999999
Q ss_pred HHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCE
Q 003024 218 LRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGR 297 (856)
Q Consensus 218 lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr 297 (856)
||++.|+++||||||+|||++|+|++||+|++||+|||+||+|||||++|++||++||++++++++... .+.++||
T Consensus 151 lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~----~~~~~gr 226 (726)
T PRK14501 151 LRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG----EIRLGGR 226 (726)
T ss_pred HHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCC----eEEECCE
Confidence 999999999999999999999999999999999999999999999999999999999999999875432 5889999
Q ss_pred EEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEE
Q 003024 298 TVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQI 377 (856)
Q Consensus 298 ~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi 377 (856)
.++|.++|+|||++.|.+....+++.+..+++++.++++++|++|||+++.||+..+|+||++|++++|+++|+++|+||
T Consensus 227 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v 306 (726)
T PRK14501 227 IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQV 306 (726)
T ss_pred EEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEE
Confidence 99999999999999999888778888888889999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeec
Q 003024 378 ANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (856)
Q Consensus 378 ~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 457 (856)
+.|+|.+.++|+++++++.+++++||++||+.+|.|++++.+.++++|+.++|++|||||+||++||||||++|||||+.
T Consensus 307 ~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~ 386 (726)
T PRK14501 307 AVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT 386 (726)
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcC
Confidence 99998888999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCCCCceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHH
Q 003024 458 GVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537 (856)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 537 (856)
+ +.|++|+|+++|+++++.+|++|||||++++|+||.++|+|+.+|++.|++++++++.+||+.+|+
T Consensus 387 ~-------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~ 453 (726)
T PRK14501 387 D-------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWA 453 (726)
T ss_pred C-------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 4 368999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccccccCcccceeEeecCcccccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCC--CCCCCCHH
Q 003024 538 RSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTS--INKAPSQA 615 (856)
Q Consensus 538 ~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~--~~~~~s~~ 615 (856)
++|+.++.++++++.... +..|++|+++.+..+|+.+++|+|++||||||++... ....++++
T Consensus 454 ~~~l~~l~~~~~~~~~~~---------------~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~ 518 (726)
T PRK14501 454 SDFLDELREAAEKNKAFA---------------SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKE 518 (726)
T ss_pred HHHHHHHHHHHhhhhccc---------------cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCCHH
Confidence 999999999887653211 1236678999999999999999999999999998432 34568999
Q ss_pred HHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhc
Q 003024 616 VISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTES 695 (856)
Q Consensus 616 ~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~ 695 (856)
++++|++|++++|+.|+|+|||+...++++++.+ +++++++||++++.++ ..|..... .+..|++.+.++++.+.++
T Consensus 519 ~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~-~l~liaenG~~i~~~~-~~w~~~~~-~~~~w~~~v~~il~~~~~~ 595 (726)
T PRK14501 519 LRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAPG-GEWQLLEP-VATEWKDAVRPILEEFVDR 595 (726)
T ss_pred HHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC-CeEEEEeCCEEEeCCC-CceEECCC-cchhHHHHHHHHHHHHHhc
Confidence 9999999988899999999999999999999876 5889999999998654 46765432 4578999999999999999
Q ss_pred CCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCC
Q 003024 696 TDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRH 775 (856)
Q Consensus 696 ~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~ 775 (856)
++|+++|.++.+++|||+++|++++..+++++.++++..+.+.++.+.+|+.++||+|+++|||.|++++++ +++
T Consensus 596 ~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~-----~~~ 670 (726)
T PRK14501 596 TPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE-----AGP 670 (726)
T ss_pred CCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHh-----cCC
Confidence 999999999999999999999999888889999999888888888899999999999999999999999998 567
Q ss_pred cceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCccccceEcCChhHHHHHHHHHHH
Q 003024 776 ADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEALAE 841 (856)
Q Consensus 776 ~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~~~~eV~~~L~~L~~ 841 (856)
+++++||||+.||++||+.++.. .++|+||++++.|+|+++++++|+++|+.|++
T Consensus 671 ~d~vl~~GD~~nDe~Mf~~~~~~-----------~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 671 YDFVLAIGDDTTDEDMFRALPET-----------AITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred CCEEEEECCCCChHHHHHhcccC-----------ceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 89999999999999999998531 28999999999999999999999999999985
No 5
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.8e-132 Score=1156.76 Aligned_cols=728 Identities=53% Similarity=0.946 Sum_probs=687.6
Q ss_pred CCeEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCcchhhhHHHhhccCeeEEEeeC
Q 003024 60 QDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFL 139 (856)
Q Consensus 60 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 139 (856)
..|+|+||||||+.+.++.+++.|.|+++.+|++.++++++. +++..||||++.++++++++.+.+.++..++|+|||+
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~ 80 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFL 80 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeeec
Confidence 569999999999999777777899999999999999988766 6899999999988999999999999999999999999
Q ss_pred ChhhhhhHhhcccccccccccccc-CCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHH
Q 003024 140 PPDILTKFYHGFCKQHLWPLFHYM-LPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFL 218 (856)
Q Consensus 140 ~~~~~~~~y~gf~~~~lWpl~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~l 218 (856)
+++....+|+||||++|||+|||+ .+..+... .|+.+.|++|+++|+.|||++++.++ ++|+|||||||||++|+++
T Consensus 81 ~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 81 DDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchhh
Confidence 999999999999999999999999 66666554 78899999999999999999999999 5799999999999999999
Q ss_pred HhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEE
Q 003024 219 RRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRT 298 (856)
Q Consensus 219 r~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~ 298 (856)
|++..+++||||+|+|||++|+|||+|.|+|||+||++||+|||||++|+|||++||.|++++++.++.+..++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888889999999
Q ss_pred EEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEe
Q 003024 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIA 378 (856)
Q Consensus 299 ~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~ 378 (856)
+.|.++|+|||+.+|......+.+..+..++++.++|+++|++|||+|+.||+.+++.||+++|++||+|+++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecC
Q 003024 379 NPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQG 458 (856)
Q Consensus 379 ~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~ 458 (856)
+|+++++++|++++.++..++++||++||+..++||+++...++..++.|+|.+||||++++++|||||+++||++|+++
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999883
Q ss_pred CCCCCCCCCCCCCCCceEEecCCccccccc-CCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHH
Q 003024 459 VSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWA 537 (856)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~ 537 (856)
+.+++|+|||+|+++++ +++++|||||.+++|.+|..+|+|+.+|++.|+.++++++..|++..|+
T Consensus 399 -------------~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~ 465 (732)
T KOG1050|consen 399 -------------KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWA 465 (732)
T ss_pred -------------cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHH
Confidence 47899999999999999 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccccccCcccceeEeecCcccccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHH
Q 003024 538 RSFFQDMERTCKDHFKRRCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVI 617 (856)
Q Consensus 538 ~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~ 617 (856)
..|++.+ ++||+.|+ +.+++..+ |+.+.+++.|+++++|+|++|||||++...+.. ++
T Consensus 466 ~~~~~~l---------~~~~~~~~-~~~~~~~~------l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~------~~ 523 (732)
T KOG1050|consen 466 KSFLQGL---------KRIWKVGF-LGFRVTPL------LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK------AI 523 (732)
T ss_pred HHHHHhh---------hhhhhhcc-cccccccc------cChhHhhhhhhhccceEEEecccccccCCCCch------HH
Confidence 9999944 45677788 88887665 788999999999999999999999999843222 99
Q ss_pred HHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCC
Q 003024 618 SIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTD 697 (856)
Q Consensus 618 ~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~ 697 (856)
..|+.||.|++|.|+|+|||++..+..|+..++++|++||||++++.+++ |++.. .+.+|++.+++++++|+++||
T Consensus 524 ~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~ert~ 599 (732)
T KOG1050|consen 524 SILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYTERTP 599 (732)
T ss_pred HHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999987 99876 788999999999999999999
Q ss_pred cceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcc
Q 003024 698 GSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHAD 777 (856)
Q Consensus 698 Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d 777 (856)
|+++|.++++++|||+++||+++.+||+|+.++|+. .+.++.+..|+..|||.|.|+|||.++..++..+ ..++|
T Consensus 600 GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~---~~~~d 674 (732)
T KOG1050|consen 600 GSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEM---VKEPD 674 (732)
T ss_pred CceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhc---CCCcc
Confidence 999999999999999999999999999999999988 7889999999999999999999999999999998 56789
Q ss_pred eEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCccccceEcCChhHHHHHHH
Q 003024 778 FVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLE 837 (856)
Q Consensus 778 ~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~~~~eV~~~L~ 837 (856)
+++|+||+..|++||..+......+.. .+.|+|++|.++|+|+|+++++.+|+++|+
T Consensus 675 f~~c~g~d~tDed~~~~~~~~~~~~~~---~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 675 FVLCIGDDRTDEDMFEFISKAKDPEKV---EEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred eEEEecCCCChHHHHHHHhhccCCccc---ceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 999999999999999999765322111 678999999999999999999999999885
No 6
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=6e-121 Score=1023.81 Aligned_cols=455 Identities=27% Similarity=0.531 Sum_probs=420.4
Q ss_pred CeEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCcchhhhHHHhhccCeeEEEeeCC
Q 003024 61 DRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLP 140 (856)
Q Consensus 61 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~ 140 (856)
+|+||||||+|+... + +.+.|||+++|.+.+. ..+++||||+|...++ .+.+......+|+|.||+|+
T Consensus 2 ~rLivVSNRlp~~~~-------~--~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~--~~~~~~~~~~~~~~~~v~L~ 69 (474)
T PRK10117 2 SRLVVVSNRIAPPDE-------H--KASAGGLAVGILGALK-AAGGLWFGWSGETGNE--DQPLKKVKKGNITWASFNLS 69 (474)
T ss_pred CCEEEEECCCcCCCC-------C--CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCC--cccchhhhcCCceEEEecCC
Confidence 589999999996321 1 3457999999988775 4799999999964322 22233333467999999999
Q ss_pred hhhhhhHhhccccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHh
Q 003024 141 PDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRR 220 (856)
Q Consensus 141 ~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~ 220 (856)
++++++||+||||++|||+|||+.+. ..|+++.|++|++||++||++|++.++|+ |+|||||||||+||.+||+
T Consensus 70 ~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~~-D~VWVHDYhL~llp~~LR~ 143 (474)
T PRK10117 70 EQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKDD-DIIWIHDYHLLPFASELRK 143 (474)
T ss_pred HHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeccHhhHHHHHHHH
Confidence 99999999999999999999999765 58999999999999999999999999985 9999999999999999999
Q ss_pred hcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEE
Q 003024 221 RFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300 (856)
Q Consensus 221 ~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~ 300 (856)
+.|+++||||||||||++|+|++||+|+|||+|||+||+|||||++|++||++||++++|++.... ..+.++||.+.
T Consensus 144 ~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v~ 220 (474)
T PRK10117 144 RGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAFR 220 (474)
T ss_pred hCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876432 25678899999
Q ss_pred EEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecC
Q 003024 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANP 380 (856)
Q Consensus 301 i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p 380 (856)
|+++|+|||++.|...+..+ +..++++++++++|+++|+|||||||+|||.++|+||++||++||+|+||++|+||+.|
T Consensus 221 v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p 299 (474)
T PRK10117 221 TEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 299 (474)
T ss_pred EEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC
Confidence 99999999999999887755 56778899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCC
Q 003024 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVS 460 (856)
Q Consensus 381 ~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~ 460 (856)
+|+++++|++++++++++|++||++||+.+|+||+|+.+.++++++.|+|++||||+|||+|||||||++||+|||..
T Consensus 300 sR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~-- 377 (474)
T PRK10117 300 SRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 377 (474)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999862
Q ss_pred CCCCCCCCCCCCCceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHH
Q 003024 461 GSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540 (856)
Q Consensus 461 ~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 540 (856)
+++|+||+|||+||+++|.+|++|||||++++|+||++||+||.+||+.|+++++++|.+||+.+|+++|
T Consensus 378 ----------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~f 447 (474)
T PRK10117 378 ----------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECF 447 (474)
T ss_pred ----------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHH
Confidence 3479999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 003024 541 FQDMERTCK 549 (856)
Q Consensus 541 l~~l~~~~~ 549 (856)
+.+|.++..
T Consensus 448 L~~L~~~~~ 456 (474)
T PRK10117 448 ISDLKQIVP 456 (474)
T ss_pred HHHHHHhhh
Confidence 999998754
No 7
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=2e-119 Score=1023.20 Aligned_cols=462 Identities=27% Similarity=0.470 Sum_probs=428.0
Q ss_pred EEcCCccceeecCCC-CCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCc-chh-hhHHHhhccCeeEEEeeCChh
Q 003024 66 VANQLPVKAKRRPDN-KGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDL-SEQ-DDVSQLLLDRFKCVPAFLPPD 142 (856)
Q Consensus 66 vsnrlP~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~-~~~~~~~~~~~~~~pv~l~~~ 142 (856)
||||||+.+++++++ ..|.+++++|||+++|.+.+.+..+++||||+|.+.++ ++. ..+......+|+|.||||+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 799999999987643 35888999999999999877656789999999975321 111 112212245799999999999
Q ss_pred hhhhHhhccccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhc
Q 003024 143 ILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRF 222 (856)
Q Consensus 143 ~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~ 222 (856)
+++.||+||||++|||+|||+... ..|+++.|++|++||++||++|++.++|+ |+|||||||||+||.+||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAEG-ATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999998644 58999999999999999999999999984 999999999999999999999
Q ss_pred CCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccC---------------
Q 003024 223 TRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKR--------------- 287 (856)
Q Consensus 223 ~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~--------------- 287 (856)
|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|+||+++....
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998875432
Q ss_pred --ceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhC
Q 003024 288 --GYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQH 365 (856)
Q Consensus 288 --~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~ 365 (856)
..+++.++||+++|+++|+|||++.|.+....+++.+.++++|+++.|+++|++|||||++|||.++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 123588999999999999999999999988889999999999999999999999999999999999999999999999
Q ss_pred CCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccC
Q 003024 366 PKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGM 445 (856)
Q Consensus 366 p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~ 445 (856)
|+|+||++||||+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++++++.+||++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHh
Q 003024 446 NLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHY 525 (856)
Q Consensus 446 nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 525 (856)
|||++||||||.+ ++||||+|||+||+++|.+|++|||||++++|+||.+||+||.+||+.|+++++
T Consensus 395 NLVa~Eyva~~~~-------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~ 461 (487)
T TIGR02398 395 NLVAKEYVAAQGL-------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMF 461 (487)
T ss_pred CcchhhHHhhhcC-------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 9999999999874 478999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCHHHHHHHHHHHHHH
Q 003024 526 RYVSTHDVAYWARSFFQDMER 546 (856)
Q Consensus 526 ~~v~~~~~~~W~~~~l~~l~~ 546 (856)
++|.+||+.+|+++|+.+|..
T Consensus 462 ~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 462 DAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHhhCCHHHHHHHHHHHhhh
Confidence 999999999999999999875
No 8
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=5e-120 Score=1031.30 Aligned_cols=467 Identities=46% Similarity=0.867 Sum_probs=359.7
Q ss_pred eEEEEEcCCccceeecCCCCC--eEEEecCCchHHhhhccCCCCCceEEEEccCCCCCcch--hhhHHHhhccCeeEEEe
Q 003024 62 RVIIVANQLPVKAKRRPDNKG--WSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSE--QDDVSQLLLDRFKCVPA 137 (856)
Q Consensus 62 ~~iivsnrlP~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~--~~~~~~~~~~~~~~~pv 137 (856)
|+||||||||+.+++++++|. |+++.+.|||+.+|.+.+ +..+++||||+|.+.+..+ ++.+.+.+.++|+|+||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~-~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV 80 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLL-KKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPV 80 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHH-HHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHH-hcCCCEEEEeCCCcCccccccccchhhhcccCceEEEE
Confidence 799999999999999874555 888888899999987644 3589999999998876544 56677778899999999
Q ss_pred eCChhhhhhHhhccccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHH
Q 003024 138 FLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTF 217 (856)
Q Consensus 138 ~l~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~ 217 (856)
||+++++++||+||||++|||+|||.++..|. ...|+++.|++|++||++||++|++.++| +|+|||||||||+||.+
T Consensus 81 ~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~-~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~~ 158 (474)
T PF00982_consen 81 FLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPD-LARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQM 158 (474)
T ss_dssp EE-HHHHHHHTTTHHHHTHHHHHTT-GG-----G----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHHH
T ss_pred EcCHHHHHHHHHhhhhhccCcccccccccccc-cchhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHHH
Confidence 99999999999999999999999998762222 26899999999999999999999999997 59999999999999999
Q ss_pred HHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCE
Q 003024 218 LRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGR 297 (856)
Q Consensus 218 lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr 297 (856)
||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++...+| ++.++||
T Consensus 159 LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~Gr 236 (474)
T PF00982_consen 159 LRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNGR 236 (474)
T ss_dssp HHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETTE
T ss_pred HHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999988776 6999999
Q ss_pred EEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCC-CeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEE
Q 003024 298 TVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEG-KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ 376 (856)
Q Consensus 298 ~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 376 (856)
.++|.++|+|||++.|...+.++++.++++++++++++ +++|+||||+|++|||.+||+||++||++||+|+|||+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999999999999999999999988 49999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeee
Q 003024 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (856)
Q Consensus 377 i~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 456 (856)
|+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++++++.|+|++||||++||+|||||||++||++||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCceEEecCCcccccccC-CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHH
Q 003024 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAY 535 (856)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 535 (856)
++ ++|+||+|||+||+++|. +|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+.+
T Consensus 397 ~~-------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~ 463 (474)
T PF00982_consen 397 DD-------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQW 463 (474)
T ss_dssp -T-------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHH
T ss_pred cC-------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHH
Confidence 84 379999999999999997 6699999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 003024 536 WARSFFQDMER 546 (856)
Q Consensus 536 W~~~~l~~l~~ 546 (856)
|+++|+++|++
T Consensus 464 W~~~~l~~L~~ 474 (474)
T PF00982_consen 464 WAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhhC
Confidence 99999999974
No 9
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.2e-114 Score=961.85 Aligned_cols=466 Identities=38% Similarity=0.694 Sum_probs=432.8
Q ss_pred CCCCCeEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCcchhhhHHHhhccCeeEEE
Q 003024 57 SVAQDRVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVP 136 (856)
Q Consensus 57 ~~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~p 136 (856)
.....|+|+||||+|+...+..+++...+..+.|||+.+|++.+ ...+++|+||+|...++.+..........++...|
T Consensus 11 ~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~-~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (486)
T COG0380 11 PLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLL-RVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAP 89 (486)
T ss_pred cccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhh-HhhcceEEecCceeccccccchhhhhccccceEEE
Confidence 45678999999999999876666677888999999999997644 45899999999987653332233333345899999
Q ss_pred eeCChhhhhhHhhccccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHH
Q 003024 137 AFLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPT 216 (856)
Q Consensus 137 v~l~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~ 216 (856)
|+++.+++++||+||||++|||+|||+.+. ..|++.+|++|++||++|||+|++.++++ |+||||||||+|+|.
T Consensus 90 v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~g-DiIWVhDYhL~L~P~ 163 (486)
T COG0380 90 VILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEPG-DIIWVHDYHLLLVPQ 163 (486)
T ss_pred EecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEechhhhhHH
Confidence 999999999999999999999999999875 58999999999999999999999999985 999999999999999
Q ss_pred HHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEE---
Q 003024 217 FLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLE--- 293 (856)
Q Consensus 217 ~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--- 293 (856)
|||++.|+++||||||+|||++|+|+|||+|+|||+|||+||+|||||++|++||++||+|+++.... ..+.
T Consensus 164 mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~-----~~~~~~~ 238 (486)
T COG0380 164 MLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGD-----ADIRFNG 238 (486)
T ss_pred HHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccccc-----ccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999986521 1233
Q ss_pred ECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCC-CeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCce
Q 003024 294 YYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEG-KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRA 372 (856)
Q Consensus 294 ~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~v 372 (856)
++|+.+.+..+|+|||+..|......+.+..++.++++.+.+ +++|++|||+||+||+..+++||++||++||+|+||+
T Consensus 239 ~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kv 318 (486)
T COG0380 239 ADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKV 318 (486)
T ss_pred cCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCce
Confidence 448999999999999999999999999998899999999976 9999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccce
Q 003024 373 VLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEY 452 (856)
Q Consensus 373 vLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea 452 (856)
+|+||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|+.++++.+++.+||++|||+++||+|||||||++||
T Consensus 319 vliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEy 398 (486)
T COG0380 319 VLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEY 398 (486)
T ss_pred EEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCCCCCCCCCCCCCCCceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCC
Q 003024 453 IVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHD 532 (856)
Q Consensus 453 ~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 532 (856)
+||+.+ ++|+||+|||+||+.+|.+|++|||||.+++|+||++||+|+++||+.|++++++.|.+||
T Consensus 399 Va~q~~-------------~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d 465 (486)
T COG0380 399 VAAQRD-------------KPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHD 465 (486)
T ss_pred HHhhcC-------------CCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhh
Confidence 999873 4899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 003024 533 VAYWARSFFQDMERT 547 (856)
Q Consensus 533 ~~~W~~~~l~~l~~~ 547 (856)
+++|+++|+.+|.++
T Consensus 466 ~~~W~~~fl~~la~~ 480 (486)
T COG0380 466 VARWANSFLDDLAQA 480 (486)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999873
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=1.2e-107 Score=933.66 Aligned_cols=454 Identities=38% Similarity=0.715 Sum_probs=423.4
Q ss_pred eEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCc-chhhhHHHhhccCeeEEEeeCC
Q 003024 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDL-SEQDDVSQLLLDRFKCVPAFLP 140 (856)
Q Consensus 62 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~~~~~~~~~~~~~~~pv~l~ 140 (856)
|+||||||+|+.+.++ + ++++.|||+++|.+.+. ..+++||||+|...++ +++.++...+..+|+|+||||+
T Consensus 1 ~livvsnr~p~~~~~~---~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 73 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG---G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLS 73 (456)
T ss_pred CEEEEECCCCccccCC---C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECC
Confidence 6999999999988754 2 56778999999988665 4799999999976553 3334555556788999999999
Q ss_pred hhhhhhHhhccccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHh
Q 003024 141 PDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRR 220 (856)
Q Consensus 141 ~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~ 220 (856)
+++++.||+||||++|||+|||+.+. .+|+++.|++|++||++||++|++.++| +|+|||||||||+||.+||+
T Consensus 74 ~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 74 EEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHHHh
Confidence 99999999999999999999998654 5899999999999999999999999998 49999999999999999999
Q ss_pred hcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEE
Q 003024 221 RFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVG 300 (856)
Q Consensus 221 ~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~ 300 (856)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|+++... ++.+.|+.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~~ 223 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999976542 4678899999
Q ss_pred EEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecC
Q 003024 301 IKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANP 380 (856)
Q Consensus 301 i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p 380 (856)
|.++|+|||++.|.+....+++.+...+++++++++++|++|||+|+.||+..+|+||++|++++|+++++++|+||+.|
T Consensus 224 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p 303 (456)
T TIGR02400 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP 303 (456)
T ss_pred EEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC
Confidence 99999999999999888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCC
Q 003024 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVS 460 (856)
Q Consensus 381 ~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~ 460 (856)
+|+++++|+++++++++++++||++||+.+|.|++++.+.++.+++.++|++|||||+||++||||||++|||||+.
T Consensus 304 ~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~--- 380 (456)
T TIGR02400 304 SRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD--- 380 (456)
T ss_pred CccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHH
Q 003024 461 GSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSF 540 (856)
Q Consensus 461 ~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 540 (856)
++.|+||+|+++|+++++.+|++|||||++++|+||.++|+|+.+||+.|+++++++|.+||+.+|+++|
T Consensus 381 ----------P~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~ 450 (456)
T TIGR02400 381 ----------PKDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDF 450 (456)
T ss_pred ----------CCCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 2358899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 003024 541 FQDME 545 (856)
Q Consensus 541 l~~l~ 545 (856)
+.+|.
T Consensus 451 l~~l~ 455 (456)
T TIGR02400 451 LSDLN 455 (456)
T ss_pred HHHhh
Confidence 99885
No 11
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=5.2e-98 Score=860.66 Aligned_cols=459 Identities=44% Similarity=0.800 Sum_probs=428.6
Q ss_pred eEEEEEcCCccceeecCCCCCeEEEecCCchHHhhhccCCCCCceEEEEccCCCCCcchhhhHHHhhccCeeEEEeeCCh
Q 003024 62 RVIIVANQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVIYVGSLKVDVDLSEQDDVSQLLLDRFKCVPAFLPP 141 (856)
Q Consensus 62 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~ 141 (856)
|+||||||+|+.++++++ |.|.++++.|||+.+|.+.+. ..+++||||++.+.+..+...+......+|+|+|||+++
T Consensus 1 ~li~vsnr~p~~~~~~~~-~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 78 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD-GEFEARRSAGGLATALKGLLK-RTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSP 78 (460)
T ss_pred CEEEEECCCCceeEEcCC-CceEeccCCCcHHHHHHHHHh-cCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCH
Confidence 689999999999998764 689999999999999987554 579999999998776554444555668899999999999
Q ss_pred hhhhhHhhccccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhh
Q 003024 142 DILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRR 221 (856)
Q Consensus 142 ~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~ 221 (856)
++++.||+||||++|||+|||+.+. .+|++++|++|++||++||++|.+.++| +|+||||||||+++|.+||++
T Consensus 79 ~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 79 EEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHhh
Confidence 9999999999999999999999776 5899999999999999999999999997 499999999999999999999
Q ss_pred cCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEE
Q 003024 222 FTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGI 301 (856)
Q Consensus 222 ~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i 301 (856)
.++++||||||||||++|+|+++|+|++|+++||+||+|||||++|++||+++|+++++++.... ..+.++|+.++|
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~---~~i~~~g~~~~i 229 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDD---GGVEYGGRRVRV 229 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCC---ceEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999886653 268899999999
Q ss_pred EEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCC
Q 003024 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPA 381 (856)
Q Consensus 302 ~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~ 381 (856)
.++|+|||++.|.+....++....+++++..++++++|++|||+++.||+..+|+||++|++++|+++++++|+|||.|+
T Consensus 230 ~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~ 309 (460)
T cd03788 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPS 309 (460)
T ss_pred EEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCC
Confidence 99999999999998777676666677777878899999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCC
Q 003024 382 RGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSG 461 (856)
Q Consensus 382 r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~ 461 (856)
|+++++++++++++++++++||.+||+.+|.||+++.+.++.+++.++|++|||||+||.+||||||++|||||+.
T Consensus 310 ~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~---- 385 (460)
T cd03788 310 RTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQD---- 385 (460)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEec----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHH
Q 003024 462 SESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541 (856)
Q Consensus 462 ~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 541 (856)
+++|+||+|+++|+++.+.+|++|||+|++++|+||.++|+|+++|++.+++++++++.++|+..|+++|+
T Consensus 386 ---------p~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l 456 (460)
T cd03788 386 ---------DDPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFL 456 (460)
T ss_pred ---------CCCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 34789999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred HHH
Q 003024 542 QDM 544 (856)
Q Consensus 542 ~~l 544 (856)
.+|
T Consensus 457 ~~l 459 (460)
T cd03788 457 DDL 459 (460)
T ss_pred Hhh
Confidence 987
No 12
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=3.8e-35 Score=353.01 Aligned_cols=543 Identities=14% Similarity=0.112 Sum_probs=328.6
Q ss_pred CEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHh-----------------cCCchHHH-HHHhHhCCEEccc
Q 003024 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYR-----------------TLPVREEI-LKALLNADLIGFH 263 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~-----------------~lp~r~ei-l~~ll~~dligf~ 263 (856)
|+|+-|+++--.+...|++++ ++|..++.|+-= .+-++ .++.|-++ -..+-.||.|.-.
T Consensus 312 DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSLg--r~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIas 388 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSLG--RDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITS 388 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhh-CCCEEEECccch--hhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEe
Confidence 999999888777888887765 699999999631 11111 01222111 2346678998877
Q ss_pred CHHHHHHHHHHHH-------hhhCceecccCceeeEEECCE-EEEEEEeecccCchHHHHHhcCchH-------------
Q 003024 264 TFDYARHFLSCCS-------RMLGLEYQSKRGYIGLEYYGR-TVGIKIMPVGIHMGQIESVLRLADK------------- 322 (856)
Q Consensus 264 t~~~~~~Fl~~~~-------r~lg~~~~~~~~~~~~~~~gr-~~~i~i~p~GId~~~~~~~~~~~~~------------- 322 (856)
|......-...-. |.|.. ...+ ++..+|+ .-++.|+|+|||+.+|.+.......
T Consensus 389 T~qE~~eq~~lY~~~~~~~~~~~~~--~~~~---gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~ 463 (1050)
T TIGR02468 389 TRQEIEEQWGLYDGFDVILERKLRA--RARR---GVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPD 463 (1050)
T ss_pred CHHHHHHHHHHhccCCchhhhhhhh--hhcc---cccccccCCCCeEEeCCCCcHHHccCCCccccchhccccccccccc
Confidence 7666553322100 11100 0112 2343443 2378899999999999863211100
Q ss_pred HHHHHHHHHHc--CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhH----HHHHHHHH
Q 003024 323 DWRVQELKQQF--EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDL----EEIQAEIH 396 (856)
Q Consensus 323 ~~~~~~l~~~~--~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~----~~l~~~~~ 396 (856)
.....+++..+ +++++||+|+|+++.||+..+|+||..+.+..+.. ++++ ++|... ..... .....++.
T Consensus 464 ~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 464 PPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred chhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHH
Confidence 00112343333 57889999999999999999999999987543321 2333 345321 11110 12234555
Q ss_pred HHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc----ceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCC
Q 003024 397 ATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIA----ECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPK 472 (856)
Q Consensus 397 ~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~A----Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~ 472 (856)
+++++. +....+.|.++++.+++.++|+.| ||||+||.+||||++++|||||+.
T Consensus 539 ~li~~l-------gL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGl--------------- 596 (1050)
T TIGR02468 539 KLIDKY-------DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL--------------- 596 (1050)
T ss_pred HHHHHh-------CCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCC---------------
Confidence 555553 334567788899999999999998 699999999999999999999955
Q ss_pred CceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHH
Q 003024 473 KSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCK 549 (856)
Q Consensus 473 ~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 549 (856)
|||+|..+|+.+.+. +|++|+|.|++++|++|.++|+ +++.++...++.++.+..+++...++.+++.+.....
T Consensus 597 --PVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~-Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~ 673 (1050)
T TIGR02468 597 --PMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVA-DKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRP 673 (1050)
T ss_pred --CEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhc
Confidence 999999999998883 5999999999999999999997 4455555666778888899999999999988887654
Q ss_pred hhccccccc------c-----C--------cccceeEeecCc--cc-----ccCCH----HHHHHH--------------
Q 003024 550 DHFKRRCWG------I-----G--------LSFGFRVVALDP--NF-----RKLSI----DAIVSA-------------- 585 (856)
Q Consensus 550 ~~~~~~~~~------~-----g--------~g~~~~~~~~~~--~f-----~~l~~----~~i~~~-------------- 585 (856)
.+..-.... . + +.|++.+-.-.+ +. -.++. ..+..+
T Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1050)
T TIGR02468 674 RHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAK 753 (1050)
T ss_pred cCcccccccccccccccccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccccccc
Confidence 431100000 0 1 011111100000 00 00000 001111
Q ss_pred ---------HH--cCCcEEEE--EecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC--CC
Q 003024 586 ---------YL--RSKSRAIL--FDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP--CK 650 (856)
Q Consensus 586 ---------y~--~s~~rlI~--~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~--~~ 650 (856)
|. +...++|+ +|+|+| .. ....-+++++++++-.....+.++++|||+..++...+.. +|
T Consensus 754 ~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~----~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp 828 (1050)
T TIGR02468 754 AQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD----LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLN 828 (1050)
T ss_pred cccccccccCccccccceEEEEEeccCCC-CC----hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCC
Confidence 11 11245666 999999 32 1112233333333201234478999999999999998854 33
Q ss_pred ---CccEEeeCCEEEEeCC-----CcceEec---CCCCcccHH-HHHHHHHHHHhhc--------CCcceEEecccc--e
Q 003024 651 ---KLGIAAEHGYFMRWSA-----DEEWQNC---GQSVDFGWI-QIAEPVMKLYTES--------TDGSYIEIKESA--L 708 (856)
Q Consensus 651 ---~lgliaenG~~I~~~~-----~~~w~~~---~~~~~~~w~-~~v~~i~~~~~~~--------~~Gs~ie~k~~~--l 708 (856)
...+||.-|..|+++. +..|..- ....+..|. +.+.+.+..+... .++...+..... .
T Consensus 829 ~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~ 908 (1050)
T TIGR02468 829 PTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDH 908 (1050)
T ss_pred CCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCc
Confidence 2347899999998862 1112110 011234452 2344344333321 133344433322 3
Q ss_pred EEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEc-CeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEE-EeCCc
Q 003024 709 VWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSG-QFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLC-IGDDR 786 (856)
Q Consensus 709 ~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g-~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vla-iGD~~ 786 (856)
...|.-.|+... ...+++.+.|+..--.. ..+++. ..+++|.|..+|||.|+++|+.++ |++++++++ +||+.
T Consensus 909 k~SY~v~d~~~~-~~v~elr~~Lr~~gLr~-~~iys~~~~~LDVlP~~ASKgqAlRyL~~rw---gi~l~~v~VfaGdSG 983 (1050)
T TIGR02468 909 CYAFKVKDPSKV-PPVKELRKLLRIQGLRC-HAVYCRNGTRLNVIPLLASRSQALRYLFVRW---GIELANMAVFVGESG 983 (1050)
T ss_pred eEEEEecCcccC-ccHHHHHHHHHhCCCce-EEEeecCCcEeeeeeCCCCHHHHHHHHHHHc---CCChHHeEEEeccCC
Confidence 333431233221 13566666665421111 233444 589999999999999999999999 999999955 99999
Q ss_pred h-hHHHH
Q 003024 787 S-DEDMF 792 (856)
Q Consensus 787 N-D~~Mf 792 (856)
| |+++|
T Consensus 984 ntD~e~L 990 (1050)
T TIGR02468 984 DTDYEGL 990 (1050)
T ss_pred CCCHHHH
Confidence 9 95544
No 13
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.2e-33 Score=291.11 Aligned_cols=249 Identities=31% Similarity=0.511 Sum_probs=215.5
Q ss_pred CHHHHHHHHHcCCcEEEEEecCCCCCCCCC--CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEE
Q 003024 578 SIDAIVSAYLRSKSRAILFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIA 655 (856)
Q Consensus 578 ~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgli 655 (856)
....+.+.|..+++++|++||||||++... ....++++++++|++|+.+.++.|+|+|||+..+++.|++ +++++++
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~ 83 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLI 83 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEE
Confidence 345667788999999999999999998443 4556899999999999999999999999999999999998 7899999
Q ss_pred eeCCEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHh
Q 003024 656 AEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVL 735 (856)
Q Consensus 656 aenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l 735 (856)
|+||++++..++..|.......+..|++.+..++++|++++||+++|.|++.+.|||++++++....++.......
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~---- 159 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATL---- 159 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhc----
Confidence 9999999988888888877777889999999999999999999999999999999999998775543333333222
Q ss_pred cCCC-eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEE
Q 003024 736 ANEP-AAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACT 814 (856)
Q Consensus 736 ~~~~-~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~ 814 (856)
.+.. +.++.|+..||++|.++|||.+++++++.. ....++++|.|||.+|++||++++... ..+|.
T Consensus 160 ~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~---~~~~~~~~~aGDD~TDE~~F~~v~~~~----------~~~v~ 226 (266)
T COG1877 160 INELKLRVTPGKMVVELRPPGVSKGAAIKYIMDEL---PFDGRFPIFAGDDLTDEDAFAAVNKLD----------SITVK 226 (266)
T ss_pred cccccEEEEeCceEEEEeeCCcchHHHHHHHHhcC---CCCCCcceecCCCCccHHHHHhhccCC----------CceEE
Confidence 2223 889999999999999999999999999987 444468999999999999999998642 26899
Q ss_pred eCCCccccceEcCChhHHHHHHHHHHHhcC
Q 003024 815 VGQKPSKAKYYLDDAAEVVTMLEALAEASA 844 (856)
Q Consensus 815 vG~~~s~A~y~l~~~~eV~~~L~~L~~~~~ 844 (856)
+|...+.|++.+.+.......|.++.....
T Consensus 227 v~~~~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 227 VGVGSTQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred ecCCcccccccccccHHHHHHHHHHHHHhh
Confidence 999999999999999999999998887654
No 14
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=100.00 E-value=3.3e-33 Score=294.90 Aligned_cols=227 Identities=37% Similarity=0.660 Sum_probs=154.9
Q ss_pred EEecCCCCCCCCC--CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEe
Q 003024 595 LFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQN 672 (856)
Q Consensus 595 ~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~ 672 (856)
|+||||||.+..+ ....+++++.++|++||+++++.|+|+|||+...+ ..+..+++++++++||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~-~~~~~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDL-ERFGGIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHH-HHH-S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHh-HHhcCCCCceEEEEeeEEeccCccccccc
Confidence 7999999999554 34578899999999999999999999999999994 44446789999999999999999888887
Q ss_pred cCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCC-CeEEEEcCeEEEE
Q 003024 673 CGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE-PAAVKSGQFIVEV 751 (856)
Q Consensus 673 ~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~-~~~v~~g~~~vEI 751 (856)
........|++.+.++++.+.++++|+++|.|++++.|||++++++++..++.++.+++.+.+... ++.+..|+.++||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 555667789999999999999999999999999999999999999999899999999999877765 7999999999999
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeC-----CCccccceEc
Q 003024 752 KPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVG-----QKPSKAKYYL 826 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-----~~~s~A~y~l 826 (856)
+|.+++||.|+++|++.+...+..+++++|+|||.+||+||++++... ..-+++.|| .++|.|+|+|
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~--------~~~~~i~V~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELE--------EGGFGIKVGSVSVGEKPTAASYRL 231 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS------------EEEEES---------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcc--------cCCCCeEEEeeccccccccccccc
Confidence 999999999999999988322334789999999999999999998631 011455555 4679999999
Q ss_pred CChh
Q 003024 827 DDAA 830 (856)
Q Consensus 827 ~~~~ 830 (856)
+|+.
T Consensus 232 ~~p~ 235 (235)
T PF02358_consen 232 DDPS 235 (235)
T ss_dssp ----
T ss_pred ccCC
Confidence 9873
No 15
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=100.00 E-value=6.2e-32 Score=286.66 Aligned_cols=237 Identities=29% Similarity=0.432 Sum_probs=196.4
Q ss_pred CCcEEEEEecCCCCCCCCC--CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCC
Q 003024 589 SKSRAILFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSA 666 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~ 666 (856)
+++++|+|||||||++..+ ....+++++.++|++|++++++.|+|+|||+..++...+ .+++++++++||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~-~~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV-KLPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC-CCCceeEEeecCEEEecCC
Confidence 4689999999999998432 345678999999999999999999999999998887765 3478999999999998744
Q ss_pred Cc-ceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecC-CCCCCchhHHHHHHHHHHHhcCCCeEEEE
Q 003024 667 DE-EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDA-DPGFGSSQAKELLDHLESVLANEPAAVKS 744 (856)
Q Consensus 667 ~~-~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~-dp~~~~~~a~el~~~L~~~l~~~~~~v~~ 744 (856)
.. .|... ......|++.+.++.+++.++ ||+++|.|+.+++|||+.+ +++++..++.++..++. ...++.+..
T Consensus 80 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~---~~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNL-TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL---SFTDLEVMD 154 (244)
T ss_pred Ccceeeec-hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh---cCCCEEEEE
Confidence 33 45543 222247888888888888887 9999999999999999998 77777667777776653 334688899
Q ss_pred cCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEe--CCCcccc
Q 003024 745 GQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTV--GQKPSKA 822 (856)
Q Consensus 745 g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v--G~~~s~A 822 (856)
++.++|++|.++|||.+++.+++++ ++.++++++|||+.||++||+.+.... .....++|+| |..++.|
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~---~~~~~~~i~iGD~~~D~~~~~~~~~~~------~~~g~~~v~v~~g~~~~~A 225 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQ---PGSGISPVYLGDDITDEDAFRVVNNQW------GNYGFYPVPIGSGSKKTVA 225 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhc---ccCCCceEEEcCCCcHHHHHHHHhccc------CCCCeEEEEEecCCcCCCc
Confidence 9999999999999999999999999 888899999999999999999993210 0112478888 8889999
Q ss_pred ceEcCChhHHHHHHHHHH
Q 003024 823 KYYLDDAAEVVTMLEALA 840 (856)
Q Consensus 823 ~y~l~~~~eV~~~L~~L~ 840 (856)
+|+++++++|.++|+.|+
T Consensus 226 ~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 226 KFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred eEeCCCHHHHHHHHHHHh
Confidence 999999999999999886
No 16
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=100.00 E-value=1.1e-31 Score=287.63 Aligned_cols=232 Identities=21% Similarity=0.262 Sum_probs=186.9
Q ss_pred cEEEEEecCCCCCCCCC--CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCc
Q 003024 591 SRAILFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADE 668 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~ 668 (856)
.++|++||||||++..+ ....++++++++|++|++++|+.|+|+|||+...+.++++.+ .+.++++||++++..++.
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~ 92 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDINGK 92 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCCC
Confidence 68999999999998322 356889999999999966689999999999999999999765 467999999999866543
Q ss_pred ceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhc-CC-CeEEEEcC
Q 003024 669 EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLA-NE-PAAVKSGQ 746 (856)
Q Consensus 669 ~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~-~~-~~~v~~g~ 746 (856)
.+.. ..+.+|...+...++.+.++++|+++|.|+..+.+||+.++ + ..+.+..+.+.+. .. ...+.+++
T Consensus 93 ~~~~---~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~-~-----~~~~~~~l~~~i~~~~~~~~~~~g~ 163 (266)
T PRK10187 93 THIV---HLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAP-Q-----HEDALLALAQRITQIWPQLALQPGK 163 (266)
T ss_pred eeec---cCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCC-c-----cHHHHHHHHHHHHhhCCceEEeCCC
Confidence 2222 23345555556666677888999999999999999998763 2 1233333332222 22 36777899
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCccccceEc
Q 003024 747 FIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYL 826 (856)
Q Consensus 747 ~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l 826 (856)
.++||+|.++|||.|++++++++ |+..+++++|||+.||++||+++... ..++|+||++.+.|+|++
T Consensus 164 ~~lEi~p~g~~Kg~al~~ll~~~---~~~~~~v~~~GD~~nD~~mf~~~~~~----------~g~~vavg~a~~~A~~~l 230 (266)
T PRK10187 164 CVVEIKPRGTNKGEAIAAFMQEA---PFAGRTPVFVGDDLTDEAGFAVVNRL----------GGISVKVGTGATQASWRL 230 (266)
T ss_pred EEEEeeCCCCCHHHHHHHHHHhc---CCCCCeEEEEcCCccHHHHHHHHHhc----------CCeEEEECCCCCcCeEeC
Confidence 99999999999999999999999 99999999999999999999999421 117899999999999999
Q ss_pred CChhHHHHHHHHHHHhcCC
Q 003024 827 DDAAEVVTMLEALAEASAP 845 (856)
Q Consensus 827 ~~~~eV~~~L~~L~~~~~~ 845 (856)
+++++|..+|+.|++....
T Consensus 231 ~~~~~v~~~L~~l~~~~~~ 249 (266)
T PRK10187 231 AGVPDVWSWLEMITTAQQQ 249 (266)
T ss_pred CCHHHHHHHHHHHHHhhhc
Confidence 9999999999999976553
No 17
>PLN03017 trehalose-phosphatase
Probab=100.00 E-value=3.8e-31 Score=288.22 Aligned_cols=243 Identities=26% Similarity=0.344 Sum_probs=193.8
Q ss_pred HHcCCcEEEEEecCCCCCCCCC-CCC-CCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEE
Q 003024 586 YLRSKSRAILFDYDGTVMPQTS-INK-APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMR 663 (856)
Q Consensus 586 y~~s~~rlI~~DlDGTLl~~~~-~~~-~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~ 663 (856)
+-+.+..+||+||||||++... .++ .+++++.++|++|+ +++.|+|+|||++..+.++++ +.+++++++||++++
T Consensus 106 ~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La--~~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~hGa~i~ 182 (366)
T PLN03017 106 ASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA--KCFPTAIVTGRCIDKVYNFVK-LAELYYAGSHGMDIK 182 (366)
T ss_pred HhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh--cCCcEEEEeCCCHHHHHHhhc-ccCceEEEcCCcEEe
Confidence 3455789999999999996543 233 79999999999995 578999999999999999974 367899999999998
Q ss_pred eCCCcceEe------cCCCCcccHHHHHHHH---HHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHH
Q 003024 664 WSADEEWQN------CGQSVDFGWIQIAEPV---MKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESV 734 (856)
Q Consensus 664 ~~~~~~w~~------~~~~~~~~w~~~v~~i---~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~ 734 (856)
.+++..+.. ........|...+.++ +..+++++||+++|.|.++++|||+.++++ .+.++..++...
T Consensus 183 ~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~----~~~~l~~~~~~v 258 (366)
T PLN03017 183 GPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEK----KWSELVLQVRSV 258 (366)
T ss_pred cCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHH----HHHHHHHHHHHH
Confidence 765422110 1111233476666665 556778899999999999999999999764 246777888877
Q ss_pred hcCCC-eEEEEcCeEEEEEeC-CCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEE
Q 003024 735 LANEP-AAVKSGQFIVEVKPQ-GVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFA 812 (856)
Q Consensus 735 l~~~~-~~v~~g~~~vEI~p~-gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~a 812 (856)
+.+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+-..++++|||||.+||+||+.+.... .-|+
T Consensus 259 l~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~---------~G~g 329 (366)
T PLN03017 259 LKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRG---------EGFG 329 (366)
T ss_pred HHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcC---------CceE
Confidence 77766 789999999999995 999999999999988222222568999999999999999996421 1289
Q ss_pred EEeC--CCccccceEcCChhHHHHHHHHHHHhcC
Q 003024 813 CTVG--QKPSKAKYYLDDAAEVVTMLEALAEASA 844 (856)
Q Consensus 813 v~vG--~~~s~A~y~l~~~~eV~~~L~~L~~~~~ 844 (856)
|.|| .++|.|+|+|+++++|.++|+.|+.-..
T Consensus 330 I~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~ 363 (366)
T PLN03017 330 ILVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQ 363 (366)
T ss_pred EEECCCCCCCcceEeCCCHHHHHHHHHHHHHHHh
Confidence 9999 4789999999999999999999986543
No 18
>PLN02580 trehalose-phosphatase
Probab=100.00 E-value=4.2e-31 Score=290.54 Aligned_cols=241 Identities=26% Similarity=0.367 Sum_probs=188.4
Q ss_pred HHHHcCCcEEEEEecCCCCCCCCC--CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEE
Q 003024 584 SAYLRSKSRAILFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYF 661 (856)
Q Consensus 584 ~~y~~s~~rlI~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (856)
.+|.+++.+++|+||||||.+... ....+++++.++|++|+++ ..|+|+|||++..+.++++. +.++++++||++
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 378999999999999999998543 4556899999999999776 47999999999999999974 579999999999
Q ss_pred EEeCCC----cceEecC------------CCCcccHHHHHHHHHHH---HhhcCCcceEEecccceEEeeecCCCCCCch
Q 003024 662 MRWSAD----EEWQNCG------------QSVDFGWIQIAEPVMKL---YTESTDGSYIEIKESALVWHHRDADPGFGSS 722 (856)
Q Consensus 662 I~~~~~----~~w~~~~------------~~~~~~w~~~v~~i~~~---~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~ 722 (856)
++.+.+ ..|.... ......|...+.++++. ++++++|+++|.|.++++||||.+++++...
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~ 268 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPL 268 (384)
T ss_pred eecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHH
Confidence 986422 1232211 01134577666665554 5667799999999999999999998776544
Q ss_pred hHHHHHHHHHHHhcCCC-eEEEEcCeEEEEEe-CCCCHHHHHHHHHHHhhhcCCCcc-e--EEEEeCCchhHHHHHHccc
Q 003024 723 QAKELLDHLESVLANEP-AAVKSGQFIVEVKP-QGVSKGVVAEKIFTTMAESGRHAD-F--VLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 723 ~a~el~~~L~~~l~~~~-~~v~~g~~~vEI~p-~gvsKG~al~~Ll~~l~~~gi~~d-~--vlaiGD~~ND~~Mf~~ag~ 797 (856)
++.++.+ .+.+.+ +.+..|+.++||+| .++|||.|+++|++++ ++..+ + ++||||+.||++||+.+..
T Consensus 269 ~~~~l~~----~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~---g~~~~d~~~pi~iGDD~TDedmF~~L~~ 341 (384)
T PLN02580 269 VAQCVHD----VLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESL---GLSNCDDVLPIYIGDDRTDEDAFKVLRE 341 (384)
T ss_pred HHHHHHH----HHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhc---CCCcccceeEEEECCCchHHHHHHhhhc
Confidence 4444444 334444 78889999999999 5999999999999998 77654 3 4999999999999999753
Q ss_pred cccCCCCCCCccEEEEEeC--CCccccceEcCChhHHHHHHHHHHHhc
Q 003024 798 ATSSGVLSSNASVFACTVG--QKPSKAKYYLDDAAEVVTMLEALAEAS 843 (856)
Q Consensus 798 ~~~~~~~~~~~~~~av~vG--~~~s~A~y~l~~~~eV~~~L~~L~~~~ 843 (856)
... -++|+|| .+.+.|+|+|+++++|.++|+.|+.-.
T Consensus 342 ~~~---------G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~ 380 (384)
T PLN02580 342 GNR---------GYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWK 380 (384)
T ss_pred cCC---------ceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhh
Confidence 210 1456665 578999999999999999999998643
No 19
>PLN02151 trehalose-phosphatase
Probab=99.98 E-value=5.9e-31 Score=286.01 Aligned_cols=240 Identities=25% Similarity=0.370 Sum_probs=193.1
Q ss_pred HcCCcEEEEEecCCCCCCCCC--CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEe
Q 003024 587 LRSKSRAILFDYDGTVMPQTS--INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRW 664 (856)
Q Consensus 587 ~~s~~rlI~~DlDGTLl~~~~--~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~ 664 (856)
.+++..+||+||||||++... ....++++++++|++|+. +..|+|+|||+...+.++++ +++++++++||++++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 456789999999999997543 344789999999999974 57999999999999999996 4679999999999987
Q ss_pred CC-CcceEe----cCCCCcccHHHHHHHHHHHH---hhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhc
Q 003024 665 SA-DEEWQN----CGQSVDFGWIQIAEPVMKLY---TESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLA 736 (856)
Q Consensus 665 ~~-~~~w~~----~~~~~~~~w~~~v~~i~~~~---~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~ 736 (856)
++ +..|+. ........|...+.++++.+ ++++||+++|.|.++++|||+.++++ +..++.+++.+.+.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 64 345532 11123456887777766555 47899999999999999999998765 24567777877777
Q ss_pred CCC-eEEEEcCeEEEEEeC-CCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEE
Q 003024 737 NEP-AAVKSGQFIVEVKPQ-GVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACT 814 (856)
Q Consensus 737 ~~~-~~v~~g~~~vEI~p~-gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~ 814 (856)
+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+...++++|||||.+||+||+.+..... -+++.
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~---------G~gI~ 317 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQ---------GLGIL 317 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCC---------CccEE
Confidence 766 789999999999995 9999999999999872222234689999999999999999864211 15677
Q ss_pred eC--CCccccceEcCChhHHHHHHHHHHHh
Q 003024 815 VG--QKPSKAKYYLDDAAEVVTMLEALAEA 842 (856)
Q Consensus 815 vG--~~~s~A~y~l~~~~eV~~~L~~L~~~ 842 (856)
|| .++|.|+|+|+++++|.++|+.|+.-
T Consensus 318 Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~ 347 (354)
T PLN02151 318 VSKYAKETNASYSLQEPDEVMEFLERLVEW 347 (354)
T ss_pred eccCCCCCcceEeCCCHHHHHHHHHHHHHh
Confidence 77 67899999999999999999999863
No 20
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.94 E-value=5.5e-26 Score=245.31 Aligned_cols=225 Identities=17% Similarity=0.202 Sum_probs=154.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCC-
Q 003024 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSAD- 667 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~- 667 (856)
|+|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||+...+.+++..+. ..++++.||+.|+...+
T Consensus 1 m~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~ 76 (272)
T PRK15126 1 MARLAAFDMDGTLLM---PDHHLGEKTLSTLARL-RERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGE 76 (272)
T ss_pred CccEEEEeCCCcCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCC
Confidence 479999999999999 7889999999999997 88999999999999999999887653 34679999999986333
Q ss_pred cceEecCCCCcccHHHHHHHHHHHHhhc--------CCcceEEeccc---------ceEEeeec---C-CCCC-------
Q 003024 668 EEWQNCGQSVDFGWIQIAEPVMKLYTES--------TDGSYIEIKES---------ALVWHHRD---A-DPGF------- 719 (856)
Q Consensus 668 ~~w~~~~~~~~~~w~~~v~~i~~~~~~~--------~~Gs~ie~k~~---------~l~~~~~~---~-dp~~------- 719 (856)
..+...++ .+.+.++++...+. ..+.+...... ...+...+ . +...
T Consensus 77 ~l~~~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~ 150 (272)
T PRK15126 77 LLHRQDLP------ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCG 150 (272)
T ss_pred EEEeecCC------HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEEC
Confidence 33333222 12333333322111 01111110000 00000000 0 0000
Q ss_pred CchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccc
Q 003024 720 GSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNAT 799 (856)
Q Consensus 720 ~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 799 (856)
......++.+.+.+.+......+.++..++||.|+++|||.|+++|++++ |++++++++|||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag~-- 225 (272)
T PRK15126 151 DHDDLTRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHL---GLSLADCMAFGDAMNDREMLGSVGR-- 225 (272)
T ss_pred CHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHh---CCCHHHeEEecCCHHHHHHHHHcCC--
Confidence 01122344455555444333445567789999999999999999999999 9999999999999999999999996
Q ss_pred cCCCCCCCccEEEEEeCCC----ccccce--Ec--CChhHHHHHHHHHHH
Q 003024 800 SSGVLSSNASVFACTVGQK----PSKAKY--YL--DDAAEVVTMLEALAE 841 (856)
Q Consensus 800 ~~~~~~~~~~~~av~vG~~----~s~A~y--~l--~~~~eV~~~L~~L~~ 841 (856)
+|+|||+ +..|+| ++ ++.++|+++|+++..
T Consensus 226 ------------~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 226 ------------GFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred ------------ceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 5777765 566776 54 467899999999873
No 21
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.94 E-value=8.1e-26 Score=242.90 Aligned_cols=225 Identities=20% Similarity=0.248 Sum_probs=159.1
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCc-cEEeeCCEEEEeCCCc
Q 003024 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKL-GIAAEHGYFMRWSADE 668 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~l-gliaenG~~I~~~~~~ 668 (856)
++|+|++|+||||++ .+++++++++++|+++ +++|+.|+|+|||+...+.+++..+..- .++++||++|...+..
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~-~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 77 (264)
T COG0561 2 MIKLLAFDLDGTLLD---SNKTISPETKEALARL-REKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGEL 77 (264)
T ss_pred CeeEEEEcCCCCccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcE
Confidence 689999999999999 7888999999999996 8999999999999999999999877533 6999999999988444
Q ss_pred ceEecCCCCcccHHHHHHHHHHHHhhcCC--cceEEecccc------------eE-----EeeecCC--CC---CC----
Q 003024 669 EWQNCGQSVDFGWIQIAEPVMKLYTESTD--GSYIEIKESA------------LV-----WHHRDAD--PG---FG---- 720 (856)
Q Consensus 669 ~w~~~~~~~~~~w~~~v~~i~~~~~~~~~--Gs~ie~k~~~------------l~-----~~~~~~d--p~---~~---- 720 (856)
.+....+ .+.+..+++....... ..+....... .. +.....+ .+ +.
T Consensus 78 i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T COG0561 78 LFQKPLS------REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKD 151 (264)
T ss_pred EeeecCC------HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecC
Confidence 4433221 2344444444422111 1111110000 00 0000000 00 00
Q ss_pred chhHHHHHHHHHHHhcCCCeEEEEcCeE-EEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccc
Q 003024 721 SSQAKELLDHLESVLANEPAAVKSGQFI-VEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNAT 799 (856)
Q Consensus 721 ~~~a~el~~~L~~~l~~~~~~v~~g~~~-vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 799 (856)
.....++.+.+.+.+......+.++..+ +||+|+|+|||.|++++++++ |+++++|++|||+.||++||+.+|.
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~l---gi~~~~v~afGD~~ND~~Ml~~ag~-- 226 (264)
T COG0561 152 HEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVAGL-- 226 (264)
T ss_pred hHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHh---CCCHHHeEEeCCccccHHHHHhcCe--
Confidence 1223445555555555445566665554 999999999999999999999 9999999999999999999999985
Q ss_pred cCCCCCCCccEEEEEeCCC----ccccceEc--CChhHHHHHHHHHHH
Q 003024 800 SSGVLSSNASVFACTVGQK----PSKAKYYL--DDAAEVVTMLEALAE 841 (856)
Q Consensus 800 ~~~~~~~~~~~~av~vG~~----~s~A~y~l--~~~~eV~~~L~~L~~ 841 (856)
+|+|||+ +..|++++ ++.++|++.|+++..
T Consensus 227 ------------gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 227 ------------GVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred ------------eeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 6788876 57788664 467999999998763
No 22
>PRK10976 putative hydrolase; Provisional
Probab=99.94 E-value=1.2e-25 Score=241.88 Aligned_cols=224 Identities=17% Similarity=0.216 Sum_probs=151.8
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCC-
Q 003024 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSAD- 667 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~- 667 (856)
++|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||+...+.+++..+. ..++++.||+.|...++
T Consensus 1 mikli~~DlDGTLl~---~~~~is~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 76 (266)
T PRK10976 1 MYQVVASDLDGTLLS---PDHTLSPYAKETLKLL-TARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGN 76 (266)
T ss_pred CceEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCC
Confidence 479999999999999 7788999999999996 88999999999999999998887664 34579999999986433
Q ss_pred cceEecCCCCcccHHHHHHHHHHHHhhc---------CCcceEEecccc---------eEEeee---cCCC-CCC-----
Q 003024 668 EEWQNCGQSVDFGWIQIAEPVMKLYTES---------TDGSYIEIKESA---------LVWHHR---DADP-GFG----- 720 (856)
Q Consensus 668 ~~w~~~~~~~~~~w~~~v~~i~~~~~~~---------~~Gs~ie~k~~~---------l~~~~~---~~dp-~~~----- 720 (856)
..+...++ .+.+.++++...+. ..+.++...... ...... ...+ .+.
T Consensus 77 ~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~ 150 (266)
T PRK10976 77 LIFSHNLD------RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFT 150 (266)
T ss_pred EehhhcCC------HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEE
Confidence 23322221 12333333332211 011111110000 000000 0000 000
Q ss_pred ---chhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003024 721 ---SSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 721 ---~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
.....++.+.+.+.+......+.++..++||.|+++|||.|++++++++ |+++++|+||||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~l---gi~~~~viafGD~~NDi~Ml~~ag~ 227 (266)
T PRK10976 151 CDSHEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKL---GYSLKDCIAFGDGMNDAEMLSMAGK 227 (266)
T ss_pred cCCHHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHc---CCCHHHeEEEcCCcccHHHHHHcCC
Confidence 0112233344444443333445567789999999999999999999999 9999999999999999999999996
Q ss_pred cccCCCCCCCccEEEEEeCCC----ccccc--eEc--CChhHHHHHHHHHH
Q 003024 798 ATSSGVLSSNASVFACTVGQK----PSKAK--YYL--DDAAEVVTMLEALA 840 (856)
Q Consensus 798 ~~~~~~~~~~~~~~av~vG~~----~s~A~--y~l--~~~~eV~~~L~~L~ 840 (856)
+|+|||+ +..|+ +++ ++.++|+++|+++.
T Consensus 228 --------------~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 228 --------------GCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred --------------CeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 4666665 46666 665 46789999999875
No 23
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.94 E-value=2.2e-25 Score=240.34 Aligned_cols=224 Identities=18% Similarity=0.242 Sum_probs=153.2
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCC----ccEEeeCCEEEEeC
Q 003024 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKK----LGIAAEHGYFMRWS 665 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~----lgliaenG~~I~~~ 665 (856)
++|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||+...+.+.+..+.- .++++.||+.|...
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 2 AIKLIAIDMDGTLLL---PDHTISPAVKQAIAAA-RAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKA 77 (270)
T ss_pred ceEEEEEecCCcCcC---CCCccCHHHHHHHHHH-HHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEEC
Confidence 479999999999999 7789999999999997 889999999999999999988876531 25899999999863
Q ss_pred --CCcceEecCCCCcccHHHHHHHHHHHHhhc--------CCcceEEecccc-----------eEEeeec---CCC--CC
Q 003024 666 --ADEEWQNCGQSVDFGWIQIAEPVMKLYTES--------TDGSYIEIKESA-----------LVWHHRD---ADP--GF 719 (856)
Q Consensus 666 --~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~--------~~Gs~ie~k~~~-----------l~~~~~~---~dp--~~ 719 (856)
+...+...++. +.+..+++...+. ..+.+...+... +...+.. .++ .+
T Consensus 78 ~~~~~i~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (270)
T PRK10513 78 ADGETVAQTALSY------DDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQF 151 (270)
T ss_pred CCCCEEEecCCCH------HHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCc
Confidence 33334433322 1222222221110 111222111100 0000000 000 00
Q ss_pred C-------chhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHH
Q 003024 720 G-------SSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMF 792 (856)
Q Consensus 720 ~-------~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf 792 (856)
. .....++.+.+.+.+......+.++..++||.|+|+|||.|+++|++++ |++++++++|||+.||++||
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml 228 (270)
T PRK10513 152 PKVMMIDEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHL---GIKPEEVMAIGDQENDIAMI 228 (270)
T ss_pred eEEEEeCCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHH
Confidence 0 0112333334433333333445677889999999999999999999999 99999999999999999999
Q ss_pred HHccccccCCCCCCCccEEEEEeCCC----ccccceEcC--ChhHHHHHHHHHH
Q 003024 793 EIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLD--DAAEVVTMLEALA 840 (856)
Q Consensus 793 ~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~--~~~eV~~~L~~L~ 840 (856)
+.+|. +|+|||+ +..|+|++. +.++|+++|+++.
T Consensus 229 ~~ag~--------------~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 229 EYAGV--------------GVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HhCCc--------------eEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 99996 5777765 578999884 5788999999875
No 24
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.93 E-value=1.6e-24 Score=244.26 Aligned_cols=302 Identities=16% Similarity=0.152 Sum_probs=208.0
Q ss_pred ChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHh
Q 003024 175 DRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL 254 (856)
Q Consensus 175 ~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l 254 (856)
....+..|...++.++.++.+..++ |+||+||++.+.++...+. .++|+.+++|+++.... .+ ....+.+.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~--Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~-~~---~~~~~~~~~ 133 (372)
T cd03792 62 SEEEKEIYLEWNEENAERPLLDLDA--DVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN-RR---VWDFLQPYI 133 (372)
T ss_pred CHHHHHHHHHHHHHHhccccccCCC--CEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc-HH---HHHHHHHHH
Confidence 3456788988888887764444444 9999999998777766543 36789999999885431 00 112223344
Q ss_pred HhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc-
Q 003024 255 LNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF- 333 (856)
Q Consensus 255 l~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~- 333 (856)
..+|.+.+.+.++++.++ ..+ .+ ++|+|||+......... ......+++++
T Consensus 134 ~~~d~~i~~~~~~~~~~~----------------------~~~--~~-vipngvd~~~~~~~~~~---~~~~~~~~~~~~ 185 (372)
T cd03792 134 EDYDAAVFHLPEYVPPQV----------------------PPR--KV-IIPPSIDPLSGKNRELS---PADIEYILEKYG 185 (372)
T ss_pred HhCCEEeecHHHhcCCCC----------------------CCc--eE-EeCCCCCCCccccCCCC---HHHHHHHHHHhC
Confidence 457777765533221110 112 22 78999997532111111 12233445555
Q ss_pred --CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003024 334 --EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (856)
Q Consensus 334 --~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~ 411 (856)
.++++|++|||+++.||+..+++|++.+.+++|+++ |+++|.+... .++..++.++ +.++.+. .
T Consensus 186 ~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~~~---~~~~~~~------~ 251 (372)
T cd03792 186 IDPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVYEE---VLEYAEG------D 251 (372)
T ss_pred CCCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHHHH---HHHHhCC------C
Confidence 478899999999999999999999999988888755 8888865421 1222232222 2222111 1
Q ss_pred ccEEEEcCC-CCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC-
Q 003024 412 EPVVFIDKP-VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS- 489 (856)
Q Consensus 412 ~pvv~~~~~-v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~- 489 (856)
..++++... ++.+++.++|++||+|++||.+||||++++|||||+. |+|+|+.+|..+.+.
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~-----------------Pvv~s~~~~~~~~i~~ 314 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGK-----------------PVIAGPVGGIPLQIED 314 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCC-----------------CEEEcCCCCchhhccc
Confidence 125555433 4899999999999999999999999999999999954 999999999888883
Q ss_pred --CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHHHHHHHHH
Q 003024 490 --GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMER 546 (856)
Q Consensus 490 --~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 546 (856)
.|++++ +.+++|++|.+++++ +++++.+.++.++++ ..+++...++++++.+++
T Consensus 315 ~~~g~~~~--~~~~~a~~i~~ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 315 GETGFLVD--TVEEAAVRILYLLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred CCceEEeC--CcHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 377776 467899999999985 556666667777876 468999999999887664
No 25
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.93 E-value=2.5e-24 Score=226.37 Aligned_cols=213 Identities=21% Similarity=0.223 Sum_probs=147.8
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCC-C
Q 003024 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSA-D 667 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~-~ 667 (856)
++|+|++|+||||++ .++.+++++.++|++| +++|+.|+|||||+...+.+++..++ ..+++++||+++.... +
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (230)
T PRK01158 2 KIKAIAIDIDGTITD---KDRRLSLKAVEAIRKA-EKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDG 77 (230)
T ss_pred ceeEEEEecCCCcCC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCC
Confidence 479999999999999 7788999999999997 88999999999999999988876654 3468999999998752 2
Q ss_pred -cceEecCCCCcccHHHHHHHHHHHHhhcCCcc--eEEecc--cce--EEeeecCCCCCCchhHHHHHHHHHHHhcCCCe
Q 003024 668 -EEWQNCGQSVDFGWIQIAEPVMKLYTESTDGS--YIEIKE--SAL--VWHHRDADPGFGSSQAKELLDHLESVLANEPA 740 (856)
Q Consensus 668 -~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs--~ie~k~--~~l--~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~ 740 (856)
..+.... + .+..+++...+..+.. .+.... ... ...+.. ...+++.+.++.. ...+
T Consensus 78 ~~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~--~~~~ 140 (230)
T PRK01158 78 KRIFLGDI---E-----ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRT-------VPVEEVRELLEEL--GLDL 140 (230)
T ss_pred CEEEEcch---H-----HHHHHHHHHHHhccccceeeecCCcccccceeeeccc-------ccHHHHHHHHHHc--CCcE
Confidence 2333221 1 1222222222211111 011000 000 000110 0122333333322 1224
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--
Q 003024 741 AVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK-- 818 (856)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-- 818 (856)
.+..+..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.+|. +++|||.
T Consensus 141 ~~~~~~~~~ei~~~~~~Kg~al~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~--------------~vam~Na~~ 203 (230)
T PRK01158 141 EIVDSGFAIHIKSPGVNKGTGLKKLAELM---GIDPEEVAAIGDSENDLEMFEVAGF--------------GVAVANADE 203 (230)
T ss_pred EEEecceEEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhcCc--------------eEEecCccH
Confidence 45555678999999999999999999999 9999999999999999999999985 5677765
Q ss_pred --ccccceEcC--ChhHHHHHHHHHH
Q 003024 819 --PSKAKYYLD--DAAEVVTMLEALA 840 (856)
Q Consensus 819 --~s~A~y~l~--~~~eV~~~L~~L~ 840 (856)
+..|+|++. +.++|++.|+++.
T Consensus 204 ~vk~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 204 ELKEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred HHHHhcceEecCCCcChHHHHHHHHh
Confidence 577899874 5788999998764
No 26
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.93 E-value=2.9e-24 Score=231.77 Aligned_cols=224 Identities=15% Similarity=0.138 Sum_probs=149.0
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC--CccEEeeCCEEEEeCCC
Q 003024 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK--KLGIAAEHGYFMRWSAD 667 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~--~lgliaenG~~I~~~~~ 667 (856)
.+++|++|+||||++ .++.++++++++|++| +++|+.|+|||||+...+.+++..+. ..++|++||+.|+.+++
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~ 81 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRL-REAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQ 81 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCc
Confidence 479999999999998 6778899999999997 88999999999999999999987763 24689999999987643
Q ss_pred cc----eEecCCCCcccHHHHHHHHHHHHhhcCCcceE--Eec----c-cceEE---------eeecCCCCC----Cchh
Q 003024 668 EE----WQNCGQSVDFGWIQIAEPVMKLYTESTDGSYI--EIK----E-SALVW---------HHRDADPGF----GSSQ 723 (856)
Q Consensus 668 ~~----w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~i--e~k----~-~~l~~---------~~~~~dp~~----~~~~ 723 (856)
.. +.......+ .+.+..+++...+.. +..+ ... . ..... ........+ ....
T Consensus 82 ~~~~~~~~~~~~~l~---~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (271)
T PRK03669 82 WQDHPDFPRIISGIS---HGEIRQVLNTLREKE-GFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDER 157 (271)
T ss_pred ccCCCCceEeecCCC---HHHHHHHHHHHHHhc-CCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHH
Confidence 11 100000111 123333333322110 1000 000 0 00000 000000000 0112
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCC---CcceEEEEeCCchhHHHHHHcccccc
Q 003024 724 AKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGR---HADFVLCIGDDRSDEDMFEIIGNATS 800 (856)
Q Consensus 724 a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi---~~d~vlaiGD~~ND~~Mf~~ag~~~~ 800 (856)
..++.+.+.. ..+.+..+..++||.|+++|||.|++++++++ |+ ++++|+||||+.||++||+.+|.
T Consensus 158 ~~~~~~~l~~----~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~l---gi~~~~~~~viafGDs~NDi~Ml~~ag~--- 227 (271)
T PRK03669 158 MAQFTARLAE----LGLQFVQGARFWHVLDASAGKDQAANWLIATY---QQLSGTRPTTLGLGDGPNDAPLLDVMDY--- 227 (271)
T ss_pred HHHHHHHHHH----CCCEEEecCeeEEEecCCCCHHHHHHHHHHHH---HhhcCCCceEEEEcCCHHHHHHHHhCCE---
Confidence 2333344432 23444556679999999999999999999999 99 99999999999999999999984
Q ss_pred CCCCCCCccEEEEEeCCCc----------cccceEcC--ChhHHHHHHHHHHHh
Q 003024 801 SGVLSSNASVFACTVGQKP----------SKAKYYLD--DAAEVVTMLEALAEA 842 (856)
Q Consensus 801 ~~~~~~~~~~~av~vG~~~----------s~A~y~l~--~~~eV~~~L~~L~~~ 842 (856)
+|+||+.. ..|.|+++ +.+++.+.|+.+.++
T Consensus 228 -----------gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 228 -----------AVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred -----------EEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 67777432 25778886 568999999998764
No 27
>PLN02887 hydrolase family protein
Probab=99.92 E-value=4e-24 Score=248.87 Aligned_cols=231 Identities=16% Similarity=0.192 Sum_probs=155.7
Q ss_pred HHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC---Cc------
Q 003024 582 IVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK---KL------ 652 (856)
Q Consensus 582 i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~---~l------ 652 (856)
..+.|+ .++|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||++..+..++..+. ..
T Consensus 300 ~~~~~~-~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl-~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~ 374 (580)
T PLN02887 300 SLRFYK-PKFSYIFCDMDGTLLN---SKSQISETNAKALKEA-LSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISES 374 (580)
T ss_pred chhhhc-cCccEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeec
Confidence 344444 4689999999999999 7889999999999996 88999999999999999998886542 11
Q ss_pred -cEEeeCCEEEEeCCC-cceEecCCCCcccHHHHHHHHHHHHhhc--------CCcceEEecccceE-Ee--eec-----
Q 003024 653 -GIAAEHGYFMRWSAD-EEWQNCGQSVDFGWIQIAEPVMKLYTES--------TDGSYIEIKESALV-WH--HRD----- 714 (856)
Q Consensus 653 -gliaenG~~I~~~~~-~~w~~~~~~~~~~w~~~v~~i~~~~~~~--------~~Gs~ie~k~~~l~-~~--~~~----- 714 (856)
++|+.||++|+...+ ..+...++ .+.+.++++...+. .++.+......... ++ +..
T Consensus 375 ~p~I~~NGA~I~d~~g~~I~~~~L~------~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~ 448 (580)
T PLN02887 375 SPGVFLQGLLVYGRQGREIYRSNLD------QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEI 448 (580)
T ss_pred ccEEeecCeEEEECCCcEEEEEeCC------HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccc
Confidence 345668998875333 23443322 13333333332211 11111110000000 00 000
Q ss_pred C-C-------CCCC------c--hhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcce
Q 003024 715 A-D-------PGFG------S--SQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADF 778 (856)
Q Consensus 715 ~-d-------p~~~------~--~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~ 778 (856)
. + .+.. . ....++.+.+.+.+......+.++..++||.|+|+|||.|+++|++++ |+++++
T Consensus 449 i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~l---GI~~ee 525 (580)
T PLN02887 449 MSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHL---GVSPDE 525 (580)
T ss_pred cCCHHHhhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHc---CCCHHH
Confidence 0 0 0000 0 011233344444444434556677889999999999999999999999 999999
Q ss_pred EEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEc--CChhHHHHHHHHHH
Q 003024 779 VLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYL--DDAAEVVTMLEALA 840 (856)
Q Consensus 779 vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~~~~eV~~~L~~L~ 840 (856)
|+||||+.||++||+.+|. +|+|||+ +..|+|++ ++.++|+++|++++
T Consensus 526 viAFGDs~NDIeMLe~AG~--------------gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 526 IMAIGDGENDIEMLQLASL--------------GVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred EEEEecchhhHHHHHHCCC--------------EEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 9999999999999999995 5777775 68899987 46799999999864
No 28
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.92 E-value=5.9e-24 Score=225.02 Aligned_cols=216 Identities=19% Similarity=0.295 Sum_probs=155.8
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCCcc-eE
Q 003024 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADEE-WQ 671 (856)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~~~-w~ 671 (856)
|++|+||||++ .+..++++++++|++| +++|+.++++|||++..+.+++..++ ..++|+.||+++....+.. +.
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKEL-QEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHH-HHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhh-cccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 7888999999999997 77899999999999999999998765 4589999999994444433 33
Q ss_pred ecCCCCcccHHHHHHHHHHHHhhcC--------CcceEEecc----------cceEEeeec-----CCCC-------CCc
Q 003024 672 NCGQSVDFGWIQIAEPVMKLYTEST--------DGSYIEIKE----------SALVWHHRD-----ADPG-------FGS 721 (856)
Q Consensus 672 ~~~~~~~~~w~~~v~~i~~~~~~~~--------~Gs~ie~k~----------~~l~~~~~~-----~dp~-------~~~ 721 (856)
..++ .+.+..+++...+.. .+.++.... ......... .... ...
T Consensus 77 ~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~ 150 (254)
T PF08282_consen 77 KPID------SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDP 150 (254)
T ss_dssp ESB-------HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCH
T ss_pred hhee------ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccc
Confidence 3222 233344444333321 111111110 000000000 0000 012
Q ss_pred hhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccC
Q 003024 722 SQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSS 801 (856)
Q Consensus 722 ~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~ 801 (856)
.....+.+++.+.+.+....+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~---~i~~~~~~~~GD~~ND~~Ml~~~~~---- 223 (254)
T PF08282_consen 151 EDLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYL---GISPEDIIAFGDSENDIEMLELAGY---- 223 (254)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHH---TTSGGGEEEEESSGGGHHHHHHSSE----
T ss_pred hhhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhc---ccccceeEEeecccccHhHHhhcCe----
Confidence 345667777777776655778889999999999999999999999999 9999999999999999999999984
Q ss_pred CCCCCCccEEEEEeCCC----ccccceEcCC--hhHHHHHH
Q 003024 802 GVLSSNASVFACTVGQK----PSKAKYYLDD--AAEVVTML 836 (856)
Q Consensus 802 ~~~~~~~~~~av~vG~~----~s~A~y~l~~--~~eV~~~L 836 (856)
+|+||+. +..|++++.+ .++|+++|
T Consensus 224 ----------~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 224 ----------SVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp ----------EEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred ----------EEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 6888876 5889998753 37788765
No 29
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.91 E-value=9.6e-24 Score=217.88 Aligned_cols=195 Identities=26% Similarity=0.377 Sum_probs=148.4
Q ss_pred EEEEecCCCCCCCCCCC-CCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceE
Q 003024 593 AILFDYDGTVMPQTSIN-KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQ 671 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~-~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~ 671 (856)
+|++|+||||++ .+ ..+++++.++|++| .+.|+.|+|+|||+...+..++..+ +.+++++||++|+.++...|.
T Consensus 1 li~~D~DgTL~~---~~~~~~~~~~~~~l~~l-~~~g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLD---PNAHELSPETIEALERL-REAGVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcC---CCCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEE
Confidence 589999999998 55 78999999999998 6668999999999999999999774 478999999999987766665
Q ss_pred ecCCCCcccHH---HHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcC-CCeEEE-EcC
Q 003024 672 NCGQSVDFGWI---QIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLAN-EPAAVK-SGQ 746 (856)
Q Consensus 672 ~~~~~~~~~w~---~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~-~~~~v~-~g~ 746 (856)
. .......|. +.+...+..+.+.+++..++.+...+.+++... +.......++.+.++....+ ..+.+. ++.
T Consensus 76 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 152 (204)
T TIGR01484 76 E-PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGA--ELGQELDSKMRERLEKIGRNDLELEAIYVGK 152 (204)
T ss_pred c-ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEecc--chhhHHHHHHHHHHHhhccccCcEEEEEecC
Confidence 4 111111111 122223444455667777888888899988764 11112234455555443221 335566 799
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 747 FIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 747 ~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
.++||+|++++||.+++.+++++ +++++++++|||+.||++||+.++.+
T Consensus 153 ~~~ev~p~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~~~~~ 201 (204)
T TIGR01484 153 TDLEVLPAGVDKGSALQALLKEL---NGKRDEILAFGDSGNDEEMFEVAGLA 201 (204)
T ss_pred CEEEEecCCCChHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999999 99999999999999999999999864
No 30
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.91 E-value=1.4e-22 Score=229.40 Aligned_cols=269 Identities=20% Similarity=0.271 Sum_probs=198.2
Q ss_pred CCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhC
Q 003024 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLG 280 (856)
Q Consensus 201 ~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg 280 (856)
.|+|+||+.. .+-..+++++|++++.+.+|..|. ++.++ .++.|-+.+. +.+.++.. .+
T Consensus 100 ~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~-~~~~~-------------~~~~ii~~S~-~~~~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFE-PELLD-------------KNAKIIVPSQ-FLKKFYEE---RL- 158 (380)
T ss_pred CcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccC-hhHhc-------------cCCEEEEcCH-HHHHHHHh---hC-
Confidence 5999999843 344667888999999999997763 22221 3566666664 44444321 10
Q ss_pred ceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccCCHHHHHHH
Q 003024 281 LEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGVDLKLLA 357 (856)
Q Consensus 281 ~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~KGi~~~l~A 357 (856)
...++.++|+|||...|.+. . ...+++++ .++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~-----~---~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSN-----P---QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCc-----c---hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 01235678999998877521 1 11233333 367899999999999999999999
Q ss_pred HHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceee
Q 003024 358 MEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVV 437 (856)
Q Consensus 358 ~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~v 437 (856)
+.++.+++|+++ |+++|.+......+..++++++++++.+.+. .+.+.+.++.+++.++|+.||+||
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~---------~v~~~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD---------RCIMLGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC---------cEEEeCCCCHHHHHHHHHhCCEEE
Confidence 999999999765 8888865432222334566777777666432 235677899999999999999999
Q ss_pred eccc-cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---Cce-eeCCCCHHHHHHHHHHHHcC
Q 003024 438 VTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAI-RVNPWNIEATAEAMHEAIQM 512 (856)
Q Consensus 438 vtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al-~VnP~d~~~~A~ai~~aL~m 512 (856)
+||. .||||++.+|||||+. |+|+|..+|+.+.+. .|+ +++|.|++++|++|.+++++
T Consensus 282 ~pS~~~E~f~~~~lEAma~G~-----------------PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d 344 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAAGK-----------------PVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLAD 344 (380)
T ss_pred eCCCCccccccHHHHHHHcCC-----------------CEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcC
Confidence 9997 5999999999999954 999999999888773 366 67899999999999999986
Q ss_pred CHHHHHHHHHHHhhhh-hcCCHHHHHHHHHHHHHH
Q 003024 513 NEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMER 546 (856)
Q Consensus 513 ~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 546 (856)
++ +..+.++.++++ ..+++...++++++.++.
T Consensus 345 ~~--~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 345 PE--LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred HH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 64 344556666654 668999999988887764
No 31
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.91 E-value=4e-23 Score=222.80 Aligned_cols=222 Identities=19% Similarity=0.267 Sum_probs=148.1
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeC-CC
Q 003024 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWS-AD 667 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~-~~ 667 (856)
++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||+...+.+.+..+. ..++++.||+.|+.. ++
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~ 77 (272)
T PRK10530 2 TYRVIALDLDGTLLT---PKKTILPESLEALARA-REAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAK 77 (272)
T ss_pred CccEEEEeCCCceEC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCC
Confidence 379999999999999 7888999999999996 88999999999999999998887764 345899999999863 33
Q ss_pred c-ceEecCCCCcccHHHHHHHHHHHHhhcC--------CcceEEecc--c--ceEEe----------eecCCC-------
Q 003024 668 E-EWQNCGQSVDFGWIQIAEPVMKLYTEST--------DGSYIEIKE--S--ALVWH----------HRDADP------- 717 (856)
Q Consensus 668 ~-~w~~~~~~~~~~w~~~v~~i~~~~~~~~--------~Gs~ie~k~--~--~l~~~----------~~~~dp------- 717 (856)
. .+...++ .+.+.++++...+.. .+.+..... . ...+. +...++
T Consensus 78 ~~l~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (272)
T PRK10530 78 KVLEADPLP------VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQ 151 (272)
T ss_pred EEEEecCCC------HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhh
Confidence 3 2332222 123333333322211 011111000 0 00000 000000
Q ss_pred -C--C--Cc-----hhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCch
Q 003024 718 -G--F--GS-----SQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRS 787 (856)
Q Consensus 718 -~--~--~~-----~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~N 787 (856)
. + .. ....++.+.+.+.+. .....++..++||.|.++|||.+++++++++ |++++++++|||+.|
T Consensus 152 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~---gi~~~e~i~~GD~~N 226 (272)
T PRK10530 152 VNAIWKFALTHEDLPQLQHFAKHVEHELG--LECEWSWHDQVDIARKGNSKGKRLTQWVEAQ---GWSMKNVVAFGDNFN 226 (272)
T ss_pred cCCcEEEEEecCCHHHHHHHHHHHhhhcC--ceEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHeEEeCCChh
Confidence 0 0 00 011222222222211 1233455678999999999999999999999 999999999999999
Q ss_pred hHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcC--ChhHHHHHHHHHH
Q 003024 788 DEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLD--DAAEVVTMLEALA 840 (856)
Q Consensus 788 D~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~--~~~eV~~~L~~L~ 840 (856)
|++||+.+|. +|+||+. +..|+|++. +.++|.++|+++.
T Consensus 227 Di~m~~~ag~--------------~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 227 DISMLEAAGL--------------GVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred hHHHHHhcCc--------------eEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 9999999985 5777775 467888874 5788999998864
No 32
>PLN02939 transferase, transferring glycosyl groups
Probab=99.91 E-value=3.2e-22 Score=238.34 Aligned_cols=320 Identities=14% Similarity=0.126 Sum_probs=215.4
Q ss_pred hHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccchHHHHHHhh-----cCCCeEEEEEccC-----CCChHHHhc-CC
Q 003024 178 LWEAYVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRR-----FTRLRMGFFLHSP-----FPSSEIYRT-LP 245 (856)
Q Consensus 178 ~w~~Y~~vN~~fa~~i~~~-~~~~~D~VwihDyhl~llp~~lr~~-----~~~~~i~~flH~P-----fP~~e~~~~-lp 245 (856)
....|.-+.+..++-+... .+| |||++||+|-.++|.++.+. +.++++.|++|-- ||...+..+ +|
T Consensus 589 n~~RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~ 666 (977)
T PLN02939 589 DFKRFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLD 666 (977)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCC
Confidence 3344555555555555432 355 89999999999985544432 4568999999964 332222111 22
Q ss_pred ch---------------HHHH-HHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccC
Q 003024 246 VR---------------EEIL-KALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIH 309 (856)
Q Consensus 246 ~r---------------~eil-~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId 309 (856)
+. --++ -|+..||.|-.-++.|++.-++ ..--|++. .+..+..++.++|+|||
T Consensus 667 ~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID 735 (977)
T PLN02939 667 VHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGID 735 (977)
T ss_pred HHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEeccee
Confidence 11 1123 3567789888888888877654 11111110 12234557788999999
Q ss_pred chHHHHHhcC-----------chHHHHHHHHHHHcC------CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCce
Q 003024 310 MGQIESVLRL-----------ADKDWRVQELKQQFE------GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRA 372 (856)
Q Consensus 310 ~~~~~~~~~~-----------~~~~~~~~~l~~~~~------~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~v 372 (856)
.+.|.+.... .........+++++. +.++|++|||+++.||+..+++|+.++++ ++ +
T Consensus 736 ~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----v 809 (977)
T PLN02939 736 TDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----G 809 (977)
T ss_pred hhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----C
Confidence 9988653210 001122345677762 35899999999999999999999998875 23 4
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccce
Q 003024 373 VLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEY 452 (856)
Q Consensus 373 vLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea 452 (856)
.||++|. |++ ..+++++.+++.+.+. .+.+.+.+.++......+|+.||+||+||.+|||||+++||
T Consensus 810 qLVIvGd-----Gp~-~~~e~eL~~La~~l~l-------~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEA 876 (977)
T PLN02939 810 QFVLLGS-----SPV-PHIQREFEGIADQFQS-------NNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIA 876 (977)
T ss_pred EEEEEeC-----CCc-HHHHHHHHHHHHHcCC-------CCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHH
Confidence 4777774 322 2355666677666432 22344556677777889999999999999999999999999
Q ss_pred eeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC------------CceeeCCCCHHHHHHHHHHHHc---CCHHHH
Q 003024 453 IVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS------------GAIRVNPWNIEATAEAMHEAIQ---MNEAEK 517 (856)
Q Consensus 453 ~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------------~al~VnP~d~~~~A~ai~~aL~---m~~~er 517 (856)
|+|+ .|+|++..+|+.+.+. +|++|+|.|+++++++|.+++. .+++.+
T Consensus 877 MAyG-----------------tPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~ 939 (977)
T PLN02939 877 MRYG-----------------SVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVW 939 (977)
T ss_pred HHCC-----------------CCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHH
Confidence 9994 4899999999988762 4899999999999999999986 234443
Q ss_pred HHHHHHHhhhhhcCCHHHHHHHHHHHHHHHH
Q 003024 518 QLRHEKHYRYVSTHDVAYWARSFFQDMERTC 548 (856)
Q Consensus 518 ~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 548 (856)
+...++ .....+++...++.+.+-..++.
T Consensus 940 ~~L~~~--am~~dFSWe~~A~qYeeLY~~ll 968 (977)
T PLN02939 940 KQLVQK--DMNIDFSWDSSASQYEELYQRAV 968 (977)
T ss_pred HHHHHH--HHHhcCCHHHHHHHHHHHHHHHH
Confidence 333332 23367899999998876665554
No 33
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.90 E-value=1.3e-22 Score=233.84 Aligned_cols=314 Identities=17% Similarity=0.135 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHHHHHHHHc-CCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChH--HHh------------c
Q 003024 179 WEAYVSANKIFSQRVIEVI-NPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSE--IYR------------T 243 (856)
Q Consensus 179 w~~Y~~vN~~fa~~i~~~~-~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e--~~~------------~ 243 (856)
|.....+...+...+.+.. +| |+|++|+++-.++..++++.. ++|+.+..|....... +.. .
T Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~--DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (439)
T TIGR02472 94 WPYLDELADNLLQHLRQQGHLP--DLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYN 170 (439)
T ss_pred hhhHHHHHHHHHHHHHHcCCCC--CEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcc
Confidence 4333444444444443322 35 999999988666666666544 6899999997543211 000 0
Q ss_pred CCchHH-HHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEE-CCEEEEEEEeecccCchHHHHHhcCch
Q 003024 244 LPVREE-ILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEY-YGRTVGIKIMPVGIHMGQIESVLRLAD 321 (856)
Q Consensus 244 lp~r~e-il~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~-~gr~~~i~i~p~GId~~~~~~~~~~~~ 321 (856)
+..+-. ....+-.+|.|...+...++.-+. .+ .-...++.++|+|||++.|.+....+.
T Consensus 171 ~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~-------------------~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~ 231 (439)
T TIGR02472 171 ISRRIEAEEETLAHASLVITSTHQEIEEQYA-------------------LYDSYQPERMQVIPPGVDLSRFYPPQSSEE 231 (439)
T ss_pred hHHHHHHHHHHHHhCCEEEECCHHHHHHHHH-------------------hccCCCccceEEECCCcChhhcCCCCcccc
Confidence 000000 011233455544433322111110 01 112346778999999998864322111
Q ss_pred HHHHHHHHHHHc--CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHH----HHHHHH
Q 003024 322 KDWRVQELKQQF--EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLE----EIQAEI 395 (856)
Q Consensus 322 ~~~~~~~l~~~~--~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~----~l~~~~ 395 (856)
.......+++.. +++++|++|||+++.||+..+|+||.++.+..+.. ++++ .+|... ..+.++ ++.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~--~~~~l~~~~~~~~~~~ 306 (439)
T TIGR02472 232 TSEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRD--DIRKMESQQREVLQKV 306 (439)
T ss_pred chhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCcc--ccccccHHHHHHHHHH
Confidence 111111222221 46789999999999999999999998643211111 2332 234211 111111 222334
Q ss_pred HHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc----ceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCC
Q 003024 396 HATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIA----ECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAP 471 (856)
Q Consensus 396 ~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~A----Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~ 471 (856)
..+++++ ++...+.|.+.++.+++.++|+.| |+||+||.+||||++++|||||+.
T Consensus 307 ~~~~~~~-------~l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~-------------- 365 (439)
T TIGR02472 307 LLLIDRY-------DLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGL-------------- 365 (439)
T ss_pred HHHHHHc-------CCCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCC--------------
Confidence 4444442 344566788889999999999988 999999999999999999999955
Q ss_pred CCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHHHHHHH
Q 003024 472 KKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDM 544 (856)
Q Consensus 472 ~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 544 (856)
|+|+|+.+|+.+.+. +|++|+|.|++++|++|.++++. +.+++...++.++++ ..+++..-++++++-|
T Consensus 366 ---PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 366 ---PIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSD-SSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred ---CEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999999999998884 48999999999999999999984 556666677777776 4588888888877654
No 34
>PLN02316 synthase/transferase
Probab=99.90 E-value=4.1e-22 Score=241.60 Aligned_cols=309 Identities=14% Similarity=0.115 Sum_probs=216.2
Q ss_pred hHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccchHHHHHHhh-----cCCCeEEEEEccCCCChHHHhcCCchHHHH
Q 003024 178 LWEAYVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRR-----FTRLRMGFFLHSPFPSSEIYRTLPVREEIL 251 (856)
Q Consensus 178 ~w~~Y~~vN~~fa~~i~~~-~~~~~D~VwihDyhl~llp~~lr~~-----~~~~~i~~flH~PfP~~e~~~~lp~r~eil 251 (856)
...-|...++..++.+... .+| |+|++||+|-.++|.++++. +.++++.+++|-.- | .+.-+-
T Consensus 688 d~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~----~~n~lk 756 (1036)
T PLN02316 688 DGERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----F----GANHIG 756 (1036)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----c----chhHHH
Confidence 3455555666666655432 345 99999999999999999875 35689999999531 1 112244
Q ss_pred HHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhc--Cc-----h---
Q 003024 252 KALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLR--LA-----D--- 321 (856)
Q Consensus 252 ~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~--~~-----~--- 321 (856)
.++..||.|---++.|++..+.. +. ...+..++.++|+|||+..|.+... .| +
T Consensus 757 ~~l~~AD~ViTVS~tya~EI~~~-----~~------------l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~ 819 (1036)
T PLN02316 757 KAMAYADKATTVSPTYSREVSGN-----SA------------IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVV 819 (1036)
T ss_pred HHHHHCCEEEeCCHHHHHHHHhc-----cC------------cccccCCEEEEECCccccccCCcccccccccCCchhhh
Confidence 56778999988888887766531 00 0112346778999999988754311 00 0
Q ss_pred --HHHHHHHHHHHcC----CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHH
Q 003024 322 --KDWRVQELKQQFE----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEI 395 (856)
Q Consensus 322 --~~~~~~~l~~~~~----~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~ 395 (856)
.......+++++. +.++|++|+||++.||+..+++|+.++++. + +.||++|. |++ ..++.++
T Consensus 820 ~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~-----Gpd-~~~e~~l 887 (1036)
T PLN02316 820 EGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGS-----APD-PRIQNDF 887 (1036)
T ss_pred hhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeC-----CCC-HHHHHHH
Confidence 1122345666662 578999999999999999999999999863 2 44676764 333 3456778
Q ss_pred HHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCce
Q 003024 396 HATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSM 475 (856)
Q Consensus 396 ~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~ 475 (856)
.+++.+++..+. ..+.|.+..+......+|++||+||+||..|||||+.+|||+|+ .|
T Consensus 888 ~~La~~Lg~~~~-----~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~G-----------------tp 945 (1036)
T PLN02316 888 VNLANQLHSSHH-----DRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYG-----------------SI 945 (1036)
T ss_pred HHHHHHhCccCC-----CeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcC-----------------CC
Confidence 888887765442 23334344444444589999999999999999999999999994 48
Q ss_pred EEecCCccccccc-C---------------CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHH
Q 003024 476 LVVSEFIGCSPSL-S---------------GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWAR 538 (856)
Q Consensus 476 lV~Se~~G~~~~l-~---------------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~ 538 (856)
+|++..+|..+.+ + +|++|+|.|++++++||.++|......+....+..++.+ ..+++..-++
T Consensus 946 pVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~ 1025 (1036)
T PLN02316 946 PVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPAL 1025 (1036)
T ss_pred eEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHH
Confidence 9999999999987 2 389999999999999999999854332333233334443 4588888888
Q ss_pred HHHHHHHHHH
Q 003024 539 SFFQDMERTC 548 (856)
Q Consensus 539 ~~l~~l~~~~ 548 (856)
.+++-.+++.
T Consensus 1026 ~Y~~LY~~a~ 1035 (1036)
T PLN02316 1026 DYMELYHSAR 1035 (1036)
T ss_pred HHHHHHHHHh
Confidence 8877665543
No 35
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.90 E-value=2.5e-22 Score=233.19 Aligned_cols=293 Identities=19% Similarity=0.237 Sum_probs=193.4
Q ss_pred CEEEEeCcccchHHHHHHhhc----CCCeEEEEEccCCCC----hHHHhcC--Cch-------------HHHHHHhHhCC
Q 003024 202 DYVWIHDYHLMVLPTFLRRRF----TRLRMGFFLHSPFPS----SEIYRTL--PVR-------------EEILKALLNAD 258 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~~----~~~~i~~flH~PfP~----~e~~~~l--p~r-------------~eil~~ll~~d 258 (856)
|+|++||+|-.++|.++++++ .++++.++.|..-.. .+.+..+ |+. .-+-.++..||
T Consensus 120 DiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 199 (466)
T PRK00654 120 DIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYAD 199 (466)
T ss_pred ceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcC
Confidence 999999999999999998663 468999999976211 1111111 110 11122445556
Q ss_pred EEcccCHHHHHHHHHHHHhhhCceecccCceeeEE--ECCEEEEEEEeecccCchHHHHHhcC-----------chHHHH
Q 003024 259 LIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLE--YYGRTVGIKIMPVGIHMGQIESVLRL-----------ADKDWR 325 (856)
Q Consensus 259 ligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--~~gr~~~i~i~p~GId~~~~~~~~~~-----------~~~~~~ 325 (856)
.|---++.|++..... ..| .++. +..+..++.++|+|||.+.|.+.... ......
T Consensus 200 ~vitvS~~~~~ei~~~---~~~---------~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~ 267 (466)
T PRK00654 200 RVTTVSPTYAREITTP---EFG---------YGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAEN 267 (466)
T ss_pred cCeeeCHHHHHHhccc---cCC---------cChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHH
Confidence 5555555444432210 000 0000 01133468889999999988643110 011122
Q ss_pred HHHHHHHcC----CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 003024 326 VQELKQQFE----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKR 401 (856)
Q Consensus 326 ~~~l~~~~~----~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~ 401 (856)
.+.+++++. ++++|++|||+++.||+..+++|+++++++ + +.|+.+|.+ + ..+++++++++.+
T Consensus 268 k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~g-----~--~~~~~~l~~l~~~ 334 (466)
T PRK00654 268 KRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGTG-----D--PELEEAFRALAAR 334 (466)
T ss_pred HHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEecC-----c--HHHHHHHHHHHHH
Confidence 345666662 568999999999999999999999998764 2 447777742 1 2345566666665
Q ss_pred HhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCC
Q 003024 402 INETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF 481 (856)
Q Consensus 402 IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~ 481 (856)
.+. .++++.+. +.+....+|+.||+||+||.+||||++.+|||+|+ .|+|+|+.
T Consensus 335 ~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G-----------------~p~V~~~~ 388 (466)
T PRK00654 335 YPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYG-----------------TLPIVRRT 388 (466)
T ss_pred CCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCC-----------------CCEEEeCC
Confidence 432 14444543 55667799999999999999999999999999994 49999999
Q ss_pred ccccccc-C--------CceeeCCCCHHHHHHHHHHHHcC--CHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHH
Q 003024 482 IGCSPSL-S--------GAIRVNPWNIEATAEAMHEAIQM--NEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERT 547 (856)
Q Consensus 482 ~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 547 (856)
+|+.+.+ . +|++|+|.|+++++++|.++|+. .++.++...++.. ...+++..-++++++-.+++
T Consensus 389 gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 389 GGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 9999988 2 38999999999999999999863 2222222222222 25688888888877655544
No 36
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.90 E-value=1.3e-21 Score=223.03 Aligned_cols=287 Identities=16% Similarity=0.157 Sum_probs=208.5
Q ss_pred CCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhc---CCc--hHHHH--HHhHhCCEEcccCHHHHHHHHH
Q 003024 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRT---LPV--REEIL--KALLNADLIGFHTFDYARHFLS 273 (856)
Q Consensus 201 ~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~---lp~--r~eil--~~ll~~dligf~t~~~~~~Fl~ 273 (856)
.|+|++|++...+++.++++ ..++|+.+.+|..++-...+.. .|. ...++ ..+-.+|.+.+.+....+.+..
T Consensus 102 ~Diih~h~~~~~~~~~~~~~-~~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~ 180 (405)
T TIGR03449 102 YDLIHSHYWLSGQVGWLLRD-RWGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVR 180 (405)
T ss_pred CCeEEechHHHHHHHHHHHH-hcCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHH
Confidence 39999998766555555554 4468899999975432221111 111 11222 2345789999999887777664
Q ss_pred HHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccCC
Q 003024 274 CCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKG 350 (856)
Q Consensus 274 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~KG 350 (856)
. .+. ...++.++|+|||.+.|.+. + ....+.++ .++++|+++||+.+.||
T Consensus 181 ~----~~~---------------~~~ki~vi~ngvd~~~~~~~---~-----~~~~~~~~~~~~~~~~i~~~G~l~~~K~ 233 (405)
T TIGR03449 181 H----YDA---------------DPDRIDVVAPGADLERFRPG---D-----RATERARLGLPLDTKVVAFVGRIQPLKA 233 (405)
T ss_pred H----cCC---------------ChhhEEEECCCcCHHHcCCC---c-----HHHHHHhcCCCCCCcEEEEecCCCcccC
Confidence 1 111 22356788999999887521 1 11233444 36789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCc-hhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHH
Q 003024 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRG-KDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAY 429 (856)
Q Consensus 351 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~-~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~al 429 (856)
+..+++|++++++++|+. ++.|+++|.+. +++ +..++ +++++++. +..+.+.+.|.++.+++..+
T Consensus 234 ~~~li~a~~~l~~~~~~~--~~~l~ivG~~~-~~g~~~~~~----l~~~~~~~-------~l~~~v~~~g~~~~~~~~~~ 299 (405)
T TIGR03449 234 PDVLLRAVAELLDRDPDR--NLRVIVVGGPS-GSGLATPDA----LIELAAEL-------GIADRVRFLPPRPPEELVHV 299 (405)
T ss_pred HHHHHHHHHHHHhhCCCc--ceEEEEEeCCC-CCcchHHHH----HHHHHHHc-------CCCceEEECCCCCHHHHHHH
Confidence 999999999999998873 47788888644 233 33333 44444443 33446677889999999999
Q ss_pred HHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHH
Q 003024 430 YTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAM 506 (856)
Q Consensus 430 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai 506 (856)
|+.||+|++||..||||++++|||+|+. |+|+|..+|..+.+. .|++++|.|++++|++|
T Consensus 300 l~~ad~~v~ps~~E~~g~~~lEAma~G~-----------------Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i 362 (405)
T TIGR03449 300 YRAADVVAVPSYNESFGLVAMEAQACGT-----------------PVVAARVGGLPVAVADGETGLLVDGHDPADWADAL 362 (405)
T ss_pred HHhCCEEEECCCCCCcChHHHHHHHcCC-----------------CEEEecCCCcHhhhccCCceEECCCCCHHHHHHHH
Confidence 9999999999999999999999999954 999999999888773 38999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHH
Q 003024 507 HEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERT 547 (856)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 547 (856)
.++++. ++++....++.++.+..+++...++++++-..++
T Consensus 363 ~~~l~~-~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 363 ARLLDD-PRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHhC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999974 4555555666777788899999998888766553
No 37
>PRK14098 glycogen synthase; Provisional
Probab=99.90 E-value=2.9e-22 Score=233.03 Aligned_cols=319 Identities=14% Similarity=0.140 Sum_probs=212.7
Q ss_pred HhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccchHHHHHHhhc------CCCeEEEEEccCC-----CChHHHhcC
Q 003024 177 SLWEAYVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRRF------TRLRMGFFLHSPF-----PSSEIYRTL 244 (856)
Q Consensus 177 ~~w~~Y~~vN~~fa~~i~~~-~~~~~D~VwihDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~~~~l 244 (856)
+....|.-.++..++.+.+. ++| |+|++||+|-.++|.+++++. .++|+.++.|... |.......+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 44566777777777766542 356 999999999999999998764 4789999999753 221111113
Q ss_pred Cch------------HHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchH
Q 003024 245 PVR------------EEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQ 312 (856)
Q Consensus 245 p~r------------~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~ 312 (856)
|+. .-+-.++..||.|---++.|++.-++....-.|++. ....+..++.++|+|||.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---------~l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---------VLEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---------HHHhcCCCeeEEeCCccccc
Confidence 321 112235667777766666666653320000001100 00113456788999999998
Q ss_pred HHHHhcCc-----------hHHHHHHHHHHHc-----CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEE
Q 003024 313 IESVLRLA-----------DKDWRVQELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ 376 (856)
Q Consensus 313 ~~~~~~~~-----------~~~~~~~~l~~~~-----~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 376 (856)
|.+..... ........+++++ +++++|++|+|+++.||+..+++|+.++++. + +.|++
T Consensus 268 ~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvi 341 (489)
T PRK14098 268 WNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVI 341 (489)
T ss_pred cCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEE
Confidence 86432110 0011223445544 2567999999999999999999999998753 3 55888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeee
Q 003024 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (856)
Q Consensus 377 i~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 456 (856)
+|.+ + ..+++++++++++.. ..+.+.+.++.+++..+|+.||+||+||..||||++.+|||+|+
T Consensus 342 vG~G-----~--~~~~~~l~~l~~~~~---------~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G 405 (489)
T PRK14098 342 CGSG-----D--KEYEKRFQDFAEEHP---------EQVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG 405 (489)
T ss_pred EeCC-----C--HHHHHHHHHHHHHCC---------CCEEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC
Confidence 8742 2 234566666666532 12345567888999999999999999999999999999999994
Q ss_pred cCCCCCCCCCCCCCCCCceEEecCCcccccccC-------CceeeCCCCHHHHHHHHHHHHcC--CHHHHHHHHHHHhhh
Q 003024 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-------GAIRVNPWNIEATAEAMHEAIQM--NEAEKQLRHEKHYRY 527 (856)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-------~al~VnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~ 527 (856)
.|+|++..+|+.+.+. .|++|+|.|++++|++|.+++.+ .++..+...++ ..
T Consensus 406 -----------------~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~--~~ 466 (489)
T PRK14098 406 -----------------TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLE--AM 466 (489)
T ss_pred -----------------CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHH--Hh
Confidence 4899999999988772 48999999999999999998742 22222222211 12
Q ss_pred hhcCCHHHHHHHHHHHHHHH
Q 003024 528 VSTHDVAYWARSFFQDMERT 547 (856)
Q Consensus 528 v~~~~~~~W~~~~l~~l~~~ 547 (856)
.+.+++..-++++++-.+++
T Consensus 467 ~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 467 ERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred cCCCChHHHHHHHHHHHHHH
Confidence 35688888888887655543
No 38
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.90 E-value=8.7e-23 Score=213.84 Aligned_cols=211 Identities=21% Similarity=0.270 Sum_probs=142.3
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCC--cce
Q 003024 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSAD--EEW 670 (856)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~--~~w 670 (856)
|++|+||||++ +++.+++++.++|++| +++|+.|++||||++..+.+++..+. ..+++++||+.|...+. ..|
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~ 76 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKA-ESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIF 76 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEE
Confidence 68999999999 7788999999999997 88999999999999999988886665 45789999999987653 344
Q ss_pred EecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEE
Q 003024 671 QNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVE 750 (856)
Q Consensus 671 ~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vE 750 (856)
.... ...|................-.+ .. ...........++ ..+.++.+. +.. ...+.++..++|
T Consensus 77 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~----~~~~~~~~~----~~~-~~~~~~~~~~~e 142 (225)
T TIGR01482 77 LAYL---EEEWFLDIVIAKTFPFSRLKVQY-PR-RASLVKMRYGIDV----DTVREIIKE----LGL-NLVAVDSGFDIH 142 (225)
T ss_pred eccc---CHHHHHHHHHhcccchhhhcccc-cc-ccceEEEeecCCH----HHHHHHHHh----cCc-eEEEecCCcEEE
Confidence 4322 22232211110000000000000 00 0011111111111 112222222 221 123335667999
Q ss_pred EEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEc
Q 003024 751 VKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYL 826 (856)
Q Consensus 751 I~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l 826 (856)
|.|+++|||.+++++++++ |++++++++|||+.||++||+.+|. +++|||+ +..|+|++
T Consensus 143 i~~~~~~K~~~i~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~--------------~vam~Na~~~~k~~A~~vt 205 (225)
T TIGR01482 143 ILPQGVNKGVAVKKLKEKL---GIKPGETLVCGDSENDIDLFEVPGF--------------GVAVANAQPELKEWADYVT 205 (225)
T ss_pred EeeCCCCHHHHHHHHHHHh---CCCHHHEEEECCCHhhHHHHHhcCc--------------eEEcCChhHHHHHhcCeec
Confidence 9999999999999999999 9999999999999999999999985 5777775 57899987
Q ss_pred C--ChhH----HHHHHHHH
Q 003024 827 D--DAAE----VVTMLEAL 839 (856)
Q Consensus 827 ~--~~~e----V~~~L~~L 839 (856)
. +.++ |.+.|+++
T Consensus 206 ~~~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 206 ESPYGEGGAEAIGEILQAI 224 (225)
T ss_pred CCCCCCcHHHHHHHHHHhh
Confidence 4 5677 88888765
No 39
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.90 E-value=1.6e-22 Score=216.29 Aligned_cols=217 Identities=19% Similarity=0.313 Sum_probs=146.0
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCC-cce
Q 003024 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSAD-EEW 670 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~-~~w 670 (856)
+|++|+||||++ .++.++++++++|++| ++.|+.|+|+|||+...+.+.+..+. ..++++.||+.|...++ ..+
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~ 76 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKL-REKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILY 76 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEe
Confidence 589999999999 7788999999999997 78899999999999999999887764 34789999999987643 333
Q ss_pred EecCCCCcccHHHHHHHHHHHHhhcC--------CcceEEecccc-eE----Eeeec----CC-----CC-CC-------
Q 003024 671 QNCGQSVDFGWIQIAEPVMKLYTEST--------DGSYIEIKESA-LV----WHHRD----AD-----PG-FG------- 720 (856)
Q Consensus 671 ~~~~~~~~~~w~~~v~~i~~~~~~~~--------~Gs~ie~k~~~-l~----~~~~~----~d-----p~-~~------- 720 (856)
...++ .+.+.++++.+.+.. .+.++...... +. ..+.. .+ .+ ..
T Consensus 77 ~~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T TIGR00099 77 KKPLD------LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLD 150 (256)
T ss_pred ecCCC------HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECC
Confidence 33322 133334443332211 11221111000 00 00000 00 00 00
Q ss_pred chhHHHHHHHHHH-HhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccc
Q 003024 721 SSQAKELLDHLES-VLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNAT 799 (856)
Q Consensus 721 ~~~a~el~~~L~~-~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 799 (856)
.....++.+.+.+ .+......+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~---~~~~~~~~~~GD~~nD~~m~~~~~~-- 225 (256)
T TIGR00099 151 PEDLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEAL---GISLEDVIAFGDGMNDIEMLEAAGY-- 225 (256)
T ss_pred HHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHc---CCCHHHEEEeCCcHHhHHHHHhCCc--
Confidence 0112333344432 222223445678889999999999999999999999 9999999999999999999999985
Q ss_pred cCCCCCCCccEEEEEeCCC----ccccceEcC--ChhHHHHHH
Q 003024 800 SSGVLSSNASVFACTVGQK----PSKAKYYLD--DAAEVVTML 836 (856)
Q Consensus 800 ~~~~~~~~~~~~av~vG~~----~s~A~y~l~--~~~eV~~~L 836 (856)
+|+||++ +..|+|++. +.++|.++|
T Consensus 226 ------------~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 226 ------------GVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ------------eeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 4677764 467888874 457777653
No 40
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.89 E-value=7e-22 Score=230.09 Aligned_cols=309 Identities=16% Similarity=0.219 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCEEEEeCcccchHHHHHHhhcC--CCeEEEEEccCCCC----hHHHhcCCchH------
Q 003024 182 YVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRRFT--RLRMGFFLHSPFPS----SEIYRTLPVRE------ 248 (856)
Q Consensus 182 Y~~vN~~fa~~i~~~-~~~~~D~VwihDyhl~llp~~lr~~~~--~~~i~~flH~PfP~----~e~~~~lp~r~------ 248 (856)
+...++..++.+... .+| |+|++||+|-.++|.++++... ++|+.++.|...+. .+.+..+....
T Consensus 111 ~~~f~~a~~~~~~~~~~~~--DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~ 188 (473)
T TIGR02095 111 FAFFSRAAAELLSGLGWQP--DVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHME 188 (473)
T ss_pred HHHHHHHHHHHHHhcCCCC--CEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCch
Confidence 344444444443321 245 9999999999999999988765 38999999986431 22222221110
Q ss_pred --------H-HHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEE--ECCEEEEEEEeecccCchHHHHHh
Q 003024 249 --------E-ILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLE--YYGRTVGIKIMPVGIHMGQIESVL 317 (856)
Q Consensus 249 --------e-il~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--~~gr~~~i~i~p~GId~~~~~~~~ 317 (856)
. +-.++..||.|-.-++.|++..... ..|. +++ +..+..++.++|+|||.+.|.+..
T Consensus 189 ~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~~ 256 (473)
T TIGR02095 189 GLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPAT 256 (473)
T ss_pred hhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCCC
Confidence 0 1224555666655555555443321 0000 010 011334678899999999886421
Q ss_pred cCc-----------hHHHHHHHHHHHcC-----CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCC
Q 003024 318 RLA-----------DKDWRVQELKQQFE-----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPA 381 (856)
Q Consensus 318 ~~~-----------~~~~~~~~l~~~~~-----~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~ 381 (856)
... ........+++++. ++++|++|||+.+.||+..+++|++++.++. +.|+.+|.+
T Consensus 257 ~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g- 329 (473)
T TIGR02095 257 DPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTG- 329 (473)
T ss_pred CcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCC-
Confidence 100 01122345666662 6789999999999999999999999997642 457777742
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCC
Q 003024 382 RGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSG 461 (856)
Q Consensus 382 r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~ 461 (856)
+ .++++++++++.+.+. .++++ ...+.+++..+|+.||++++||..||||++.+|||+|+
T Consensus 330 ----~--~~~~~~l~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G----- 389 (473)
T TIGR02095 330 ----D--PELEEALRELAERYPG--------NVRVI-IGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYG----- 389 (473)
T ss_pred ----C--HHHHHHHHHHHHHCCC--------cEEEE-EcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCC-----
Confidence 1 2355666666654221 13333 45678888999999999999999999999999999994
Q ss_pred CCCCCCCCCCCCceEEecCCcccccccC---------CceeeCCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHhhhhh
Q 003024 462 SESSSESSAPKKSMLVVSEFIGCSPSLS---------GAIRVNPWNIEATAEAMHEAIQM---NEAEKQLRHEKHYRYVS 529 (856)
Q Consensus 462 ~~~~~~~~~~~~g~lV~Se~~G~~~~l~---------~al~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~ 529 (856)
.|+|+|..+|..+.+. .|++++|.|++++|++|.++|.+ .++.++...++.. .+
T Consensus 390 ------------~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~ 455 (473)
T TIGR02095 390 ------------TVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQ 455 (473)
T ss_pred ------------CCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--cc
Confidence 4999999999999882 37999999999999999999873 3333333333222 35
Q ss_pred cCCHHHHHHHHHHHHH
Q 003024 530 THDVAYWARSFFQDME 545 (856)
Q Consensus 530 ~~~~~~W~~~~l~~l~ 545 (856)
.+++...++++++-.+
T Consensus 456 ~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 456 DFSWDKSAKQYVELYR 471 (473)
T ss_pred CCCcHHHHHHHHHHHH
Confidence 6888888887766543
No 41
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.89 E-value=2.5e-22 Score=209.16 Aligned_cols=208 Identities=21% Similarity=0.291 Sum_probs=141.1
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCC-ccEEeeCCEEEEeCCCcc
Q 003024 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKK-LGIAAEHGYFMRWSADEE 669 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~-lgliaenG~~I~~~~~~~ 669 (856)
+|+|++|+||||++ .++.+++++.++|++| +++|+.|+++|||++..+.+++..++- .+++++||+.|+..+...
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKA-EKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 47999999999998 7888999999999997 889999999999999999998877653 368999999999865432
Q ss_pred eEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEE
Q 003024 670 WQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIV 749 (856)
Q Consensus 670 w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~v 749 (856)
.. . .....|....... ..+....-.... ......+.. ..+ ..+.+.+.++ .....+..+..++
T Consensus 77 ~~--~-~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~--~~~-----~~~~~~~~l~----~~~~~~~~~~~~~ 139 (215)
T TIGR01487 77 FL--A-NMEEEWFLDEEKK-KRFPRDRLSNEY--PRASLVIMR--EGK-----DVDEVREIIK----ERGLNLVDSGFAI 139 (215)
T ss_pred EE--e-cccchhhHHHhhh-hhhhhhhccccc--ceeEEEEec--CCc-----cHHHHHHHHH----hCCeEEEecCceE
Confidence 11 1 1111111100000 001000000000 000111111 001 1223333332 2334445556789
Q ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceE
Q 003024 750 EVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYY 825 (856)
Q Consensus 750 EI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~ 825 (856)
||.|.+++||.+++++++++ |++++++++|||+.||++||+.++. +|+||+. +..|+|+
T Consensus 140 ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~iGDs~ND~~ml~~ag~--------------~vam~na~~~~k~~A~~v 202 (215)
T TIGR01487 140 HIMKKGVDKGVGVEKLKELL---GIKPEEVAAIGDSENDIDLFRVVGF--------------KVAVANADDQLKEIADYV 202 (215)
T ss_pred EEecCCCChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHhCCC--------------eEEcCCccHHHHHhCCEE
Confidence 99999999999999999999 9999999999999999999999985 5777765 5789998
Q ss_pred cC--ChhHHHHHH
Q 003024 826 LD--DAAEVVTML 836 (856)
Q Consensus 826 l~--~~~eV~~~L 836 (856)
+. +.++|.++|
T Consensus 203 ~~~~~~~Gv~~~l 215 (215)
T TIGR01487 203 TSNPYGEGVVEVL 215 (215)
T ss_pred cCCCCCchhhhhC
Confidence 84 457777654
No 42
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.89 E-value=1e-21 Score=223.46 Aligned_cols=305 Identities=14% Similarity=0.132 Sum_probs=202.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCC--hHH-Hh-cCCc--------
Q 003024 179 WEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPS--SEI-YR-TLPV-------- 246 (856)
Q Consensus 179 w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~--~e~-~~-~lp~-------- 246 (856)
+.....+-+.......+.++| |+|+.| +.+....++++.+|++++..++|..+=. .+. |. ..+.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (396)
T cd03818 68 VLRGQAVARALLALRAKGFRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRL 143 (396)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHH
Confidence 333344443333333445566 899999 5666677899999999998877643311 110 10 1111
Q ss_pred hHH---HHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHH
Q 003024 247 REE---ILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKD 323 (856)
Q Consensus 247 r~e---il~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~ 323 (856)
+.. +...+-.+|.+-..+......|.+ ... .++.++|+|||.+.|.+.. ..
T Consensus 144 ~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~--------------------~~~--~ki~vI~ngvd~~~f~~~~---~~- 197 (396)
T cd03818 144 RNRNALILLALAQADAGVSPTRWQRSTFPA--------------------ELR--SRISVIHDGIDTDRLRPDP---QA- 197 (396)
T ss_pred HHhhhHhHHHHHhCCEEECCCHHHHhhCcH--------------------hhc--cceEEeCCCccccccCCCc---hh-
Confidence 111 234566677777666533333221 011 3577899999998886321 11
Q ss_pred HHHHHHHHH---cCCCeEEEeccC-ccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHH
Q 003024 324 WRVQELKQQ---FEGKTVLLGVDD-MDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATC 399 (856)
Q Consensus 324 ~~~~~l~~~---~~~k~iil~VdR-ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv 399 (856)
...++.. ..++++|++++| +.+.||+..+++|+.++.+++|+++ |+++|......+...+......+++.
T Consensus 198 --~~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~~~ 271 (396)
T cd03818 198 --RLRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQHML 271 (396)
T ss_pred --hhcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHHHH
Confidence 1111111 146789999998 9999999999999999999999766 88888532111110000001112223
Q ss_pred HHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEec
Q 003024 400 KRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS 479 (856)
Q Consensus 400 ~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~S 479 (856)
++++.+.+ .+.+.|.|.++.+++.++|+.||++++||..||+|++++|||||+. |+|+|
T Consensus 272 ~~~~~~~~----~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-----------------PVIas 330 (396)
T cd03818 272 DELGGRLD----LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-----------------LVVGS 330 (396)
T ss_pred HHhhcccC----cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-----------------CEEEc
Confidence 33332221 1345677899999999999999999999999999999999999955 99999
Q ss_pred CCcccccccC---CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc-CCHHHHHHHHH
Q 003024 480 EFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFF 541 (856)
Q Consensus 480 e~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l 541 (856)
+.+|..+.+. .|++|+|.|++++|++|.++++.+ +++....++.++++.+ +++...+++++
T Consensus 331 ~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 331 DTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 9999988883 489999999999999999999854 5566667777888876 77666666554
No 43
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.89 E-value=3.5e-22 Score=212.80 Aligned_cols=221 Identities=15% Similarity=0.219 Sum_probs=148.6
Q ss_pred EEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC---CccEEeeCCEEEEeCCCc
Q 003024 592 RAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK---KLGIAAEHGYFMRWSADE 668 (856)
Q Consensus 592 rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~---~lgliaenG~~I~~~~~~ 668 (856)
.+|++|+||||+++...+...++++.++++++ .++|+.|+++|||+..++..+...++ .-.++++||+.|+.++..
T Consensus 2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~-~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~ 80 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTDGDNQALLRLNALLEDH-RGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAE 80 (249)
T ss_pred eEEEEcCCCcCcCCCCCChHHHHHHHHHHHHh-hccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCC
Confidence 58999999999974334577889999999996 78899999999999999999865432 113788999999876521
Q ss_pred ----ceEecCCCCcccHH-HHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCC---Ce
Q 003024 669 ----EWQNCGQSVDFGWI-QIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE---PA 740 (856)
Q Consensus 669 ----~w~~~~~~~~~~w~-~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~---~~ 740 (856)
.|... ....|. +.+..+...+....+......+..++.+.... + ...++.+.+.+.+... ..
T Consensus 81 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~---~----~~~~~~~~l~~~l~~~~~~~~ 150 (249)
T TIGR01485 81 VPDQHWAEY---LSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDP---E----AAPEVIKQLTEMLKETGLDVK 150 (249)
T ss_pred cCCHHHHHH---HhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEech---h----hhhHHHHHHHHHHHhcCCCEE
Confidence 11111 111232 12222333333333333333344445544321 1 1223444444444332 24
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCc-
Q 003024 741 AVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP- 819 (856)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~- 819 (856)
.+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++. .+|+|+|+.
T Consensus 151 ~~~~~~~~ldi~~~~~~K~~al~~l~~~~---~i~~~~~i~~GD~~ND~~ml~~~~~-------------~~va~~na~~ 214 (249)
T TIGR01485 151 LIYSSGKDLDILPQGSGKGQALQYLLQKL---AMEPSQTLVCGDSGNDIELFEIGSV-------------RGVIVSNAQE 214 (249)
T ss_pred EEEECCceEEEEeCCCChHHHHHHHHHHc---CCCccCEEEEECChhHHHHHHccCC-------------cEEEECCCHH
Confidence 45778899999999999999999999999 9999999999999999999998542 356777652
Q ss_pred ---cc-------cceEcC--ChhHHHHHHHHH
Q 003024 820 ---SK-------AKYYLD--DAAEVVTMLEAL 839 (856)
Q Consensus 820 ---s~-------A~y~l~--~~~eV~~~L~~L 839 (856)
.. ..|+.+ .++++++.|+++
T Consensus 215 ~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 215 ELLQWYDENAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred HHHHHHHhcccCcEEEecCCCcHHHHHHHHHc
Confidence 11 125554 468899888875
No 44
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.89 E-value=2.4e-21 Score=220.91 Aligned_cols=274 Identities=15% Similarity=0.107 Sum_probs=198.1
Q ss_pred CEEEEeCcccchHHHHHHhh-cCCCeEEEEEccCCCC-hHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhh
Q 003024 202 DYVWIHDYHLMVLPTFLRRR-FTRLRMGFFLHSPFPS-SEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRML 279 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~-~~~~~i~~flH~PfP~-~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l 279 (856)
|+|+.|..+.-.+..++++. ....++.+++|-+-.. ..+.. ..+..+-+.+-.+|.|-..+....+.+.+ +
T Consensus 120 diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~-----~ 192 (406)
T PRK15427 120 DVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK-----M 192 (406)
T ss_pred CEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH-----c
Confidence 89999988776667777663 2345677888954211 11110 11112223344688877666543333321 1
Q ss_pred CceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHH
Q 003024 280 GLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAME 359 (856)
Q Consensus 280 g~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~ 359 (856)
|. ...+|.++|+|||.+.|..... ....++..|++|||+.+.||+..+++|+.
T Consensus 193 g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a~~ 245 (406)
T PRK15427 193 GC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEACR 245 (406)
T ss_pred CC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHHHH
Confidence 21 1235667899999988752110 01134567999999999999999999999
Q ss_pred HHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeec
Q 003024 360 HLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVT 439 (856)
Q Consensus 360 ~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvt 439 (856)
++.+++|+++ |+.+|. |+..++ +++++++. +..+.+.+.|.++++|+..+|+.||+||+|
T Consensus 246 ~l~~~~~~~~----l~ivG~-----G~~~~~----l~~~~~~~-------~l~~~V~~~G~~~~~el~~~l~~aDv~v~p 305 (406)
T PRK15427 246 QLKEQGVAFR----YRILGI-----GPWERR----LRTLIEQY-------QLEDVVEMPGFKPSHEVKAMLDDADVFLLP 305 (406)
T ss_pred HHHhhCCCEE----EEEEEC-----chhHHH----HHHHHHHc-------CCCCeEEEeCCCCHHHHHHHHHhCCEEEEC
Confidence 9988888654 777773 444334 44444442 345577888999999999999999999999
Q ss_pred ccc------ccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHH
Q 003024 440 AVR------DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAI 510 (856)
Q Consensus 440 S~~------EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL 510 (856)
|.. ||++++.+|||+|+. |+|+|..+|+.+.+. +|++|+|.|++++|++|.+++
T Consensus 306 S~~~~~g~~Eg~p~~llEAma~G~-----------------PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~ 368 (406)
T PRK15427 306 SVTGADGDMEGIPVALMEAMAVGI-----------------PVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFS 368 (406)
T ss_pred CccCCCCCccCccHHHHHHHhCCC-----------------CEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHH
Confidence 984 999999999999955 999999999998883 489999999999999999999
Q ss_pred cCCHHHHHHHHHHHhhhhh-cCCHHHHHHHHHHHHHH
Q 003024 511 QMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQDMER 546 (856)
Q Consensus 511 ~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 546 (856)
++++++++...++.++++. .+++...++++.+-+++
T Consensus 369 ~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 369 QLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred hCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 9777777777888888774 58988888887766543
No 45
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.89 E-value=2.3e-21 Score=220.84 Aligned_cols=282 Identities=13% Similarity=0.134 Sum_probs=196.9
Q ss_pred HHHcCCCCCEEEEeCcccchH-HHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHH-HhHhCCEEcccCHHHHHHH
Q 003024 194 IEVINPEDDYVWIHDYHLMVL-PTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILK-ALLNADLIGFHTFDYARHF 271 (856)
Q Consensus 194 ~~~~~~~~D~VwihDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~-~ll~~dligf~t~~~~~~F 271 (856)
++..+| |+|++|+++-... ...+-.+..++|+.+..|..|+..+.... +...+.+ .+-.+|.+.+.+....+.+
T Consensus 84 ~~~~~~--DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~ 159 (398)
T cd03796 84 LIRERI--TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENT 159 (398)
T ss_pred HHhcCC--CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHH
Confidence 334466 9999999875433 34443445578999999987754332110 1111222 2345787777776555444
Q ss_pred HHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCH
Q 003024 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGV 351 (856)
Q Consensus 272 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi 351 (856)
.... + ....++.++|+|+|...|.+... . ..+++++|+++||+.+.||+
T Consensus 160 ~~~~----~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~ 208 (398)
T cd03796 160 VLRA----S---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGI 208 (398)
T ss_pred HHHh----C---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCH
Confidence 3210 1 11235678899999988753211 0 12567899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHH
Q 003024 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (856)
Q Consensus 352 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 431 (856)
..+++|+..+.+++|+++ |+.+|. ++..+++++ ++++. +..+.+.+.|.++.+++.++|+
T Consensus 209 ~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l~~----~~~~~-------~l~~~v~~~G~~~~~~~~~~l~ 268 (398)
T cd03796 209 DLLVGIIPEICKKHPNVR----FIIGGD-----GPKRILLEE----MREKY-------NLQDRVELLGAVPHERVRDVLV 268 (398)
T ss_pred HHHHHHHHHHHhhCCCEE----EEEEeC-----CchHHHHHH----HHHHh-------CCCCeEEEeCCCCHHHHHHHHH
Confidence 999999999988888765 777773 344344444 33332 3344556678899999999999
Q ss_pred hcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC-C-ceeeCCCCHHHHHHHHHHH
Q 003024 432 IAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G-AIRVNPWNIEATAEAMHEA 509 (856)
Q Consensus 432 ~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-al~VnP~d~~~~A~ai~~a 509 (856)
.||++++||..||||++.+|||+|+. |+|+|..+|..+.+. + ++.++| |.++++++|.++
T Consensus 269 ~ad~~v~pS~~E~~g~~~~EAma~G~-----------------PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~ 330 (398)
T cd03796 269 QGHIFLNTSLTEAFCIAIVEAASCGL-----------------LVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEA 330 (398)
T ss_pred hCCEEEeCChhhccCHHHHHHHHcCC-----------------CEEECCCCCchhheeCCceeecCC-CHHHHHHHHHHH
Confidence 99999999999999999999999955 999999999988883 3 444544 999999999999
Q ss_pred HcCCHHHHHHHHHHHhh-hhhcCCHHHHHHHHHHHHHHHHH
Q 003024 510 IQMNEAEKQLRHEKHYR-YVSTHDVAYWARSFFQDMERTCK 549 (856)
Q Consensus 510 L~m~~~er~~r~~~~~~-~v~~~~~~~W~~~~l~~l~~~~~ 549 (856)
+.++.+.+. ..++.++ ....+++..-++++++..+++..
T Consensus 331 l~~~~~~~~-~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 331 ISILRTGKH-DPWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred HhChhhhhh-HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 986554433 3344444 44568999999998888777543
No 46
>PRK14099 glycogen synthase; Provisional
Probab=99.88 E-value=6.2e-21 Score=221.66 Aligned_cols=298 Identities=18% Similarity=0.187 Sum_probs=190.6
Q ss_pred cCCCCCEEEEeCcccchHHHHHHhh-cCCCeEEEEEccC-----CCChHHHhc--CCchH-------------HHHHHhH
Q 003024 197 INPEDDYVWIHDYHLMVLPTFLRRR-FTRLRMGFFLHSP-----FPSSEIYRT--LPVRE-------------EILKALL 255 (856)
Q Consensus 197 ~~~~~D~VwihDyhl~llp~~lr~~-~~~~~i~~flH~P-----fP~~e~~~~--lp~r~-------------eil~~ll 255 (856)
++| |+|++||+|-.++|.+++.+ ..++++.++.|.. ||. ..+.. +|... -+-.++.
T Consensus 132 ~~p--DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 132 FVP--DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCC--CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 456 99999999999999999753 3467899999964 222 11111 11100 0222344
Q ss_pred hCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCc-------h----HHH
Q 003024 256 NADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLA-------D----KDW 324 (856)
Q Consensus 256 ~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~-------~----~~~ 324 (856)
.||.|---++.|++...+.- .-.|++. .+..+..++.++|+|||.+.|.+..... + ...
T Consensus 209 ~ad~vitVS~~~a~ei~~~~-~g~gl~~---------~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~ 278 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPE-AGMGLDG---------LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAA 278 (485)
T ss_pred hcCeeeecChhHHHHHhccc-CCcChHH---------HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHH
Confidence 45544444444443322100 0000000 0011345688899999999886532110 0 011
Q ss_pred HHHHHHHHcC-----CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHH
Q 003024 325 RVQELKQQFE-----GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATC 399 (856)
Q Consensus 325 ~~~~l~~~~~-----~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv 399 (856)
....+++++. +.+++++|+|+++.||+..+++|+.+++++ + +.|+++|. |+ .++++++++++
T Consensus 279 ~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~-----G~--~~~~~~l~~l~ 345 (485)
T PRK14099 279 NKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGS-----GD--AELEARFRAAA 345 (485)
T ss_pred hHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEec-----CC--HHHHHHHHHHH
Confidence 1245566652 356888999999999999999999998753 2 44777774 22 23455666665
Q ss_pred HHHhcccCCCCcccEEEEcCCCCHHHHHHHH-HhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEe
Q 003024 400 KRINETFGRPGYEPVVFIDKPVTLSERAAYY-TIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVV 478 (856)
Q Consensus 400 ~~IN~~~~~~~~~pvv~~~~~v~~~el~aly-~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~ 478 (856)
.+.. ..++++.+. .+++..+| +.||+||+||.+||||++.+|||+|+ .|+|+
T Consensus 346 ~~~~--------~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G-----------------~ppVv 398 (485)
T PRK14099 346 QAYP--------GQIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYG-----------------AVPVV 398 (485)
T ss_pred HHCC--------CCEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCC-----------------CCcEE
Confidence 5421 124455565 57888877 56999999999999999999999994 37888
Q ss_pred cCCccccccc-C-----------CceeeCCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHH
Q 003024 479 SEFIGCSPSL-S-----------GAIRVNPWNIEATAEAMHEAIQ--MNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (856)
Q Consensus 479 Se~~G~~~~l-~-----------~al~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (856)
|..+|+.+.+ . .|++|+|.|++++|++|.+++. .+++.++...++.+ ...+++..-++++++-.
T Consensus 399 s~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY 476 (485)
T PRK14099 399 ARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAALY 476 (485)
T ss_pred eCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHHHH
Confidence 9999998877 2 4899999999999999998542 23333333333332 36788888888887766
Q ss_pred HHHHH
Q 003024 545 ERTCK 549 (856)
Q Consensus 545 ~~~~~ 549 (856)
+++..
T Consensus 477 ~~l~~ 481 (485)
T PRK14099 477 RSLVA 481 (485)
T ss_pred HHHHh
Confidence 66543
No 47
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.88 E-value=1.2e-21 Score=209.74 Aligned_cols=219 Identities=15% Similarity=0.079 Sum_probs=144.3
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCCcc--
Q 003024 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADEE-- 669 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~~~-- 669 (856)
+|++|+||||++ .++.+.+.++++|++| ++.|+.|+++|||+...+.+++..+. ..++|++||++|...++..
T Consensus 1 li~~DlDGTll~---~~~~~~~~~~~~i~~l-~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~ 76 (256)
T TIGR01486 1 WIFTDLDGTLLD---PHGYDWGPAKEVLERL-QELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTE 76 (256)
T ss_pred CEEEcCCCCCcC---CCCcCchHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccC
Confidence 589999999998 5553445799999997 88899999999999999999987764 3579999999998765421
Q ss_pred ---eEecCCCCcccHHHHHHHHHHHHhhcCCcceEE-eccc--------c-------eEEeeecCCCCCCchhHHHHHHH
Q 003024 670 ---WQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIE-IKES--------A-------LVWHHRDADPGFGSSQAKELLDH 730 (856)
Q Consensus 670 ---w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie-~k~~--------~-------l~~~~~~~dp~~~~~~a~el~~~ 730 (856)
|.. ....++ +.+.++++.+.+..+..+.. .... . .... ... ...... ..+..+.
T Consensus 77 ~~~~~~---~~~i~~-~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~-~~~~~~~ 149 (256)
T TIGR01486 77 PEYPVI---ALGIPY-EKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQR-REY-SETILW-SEERRER 149 (256)
T ss_pred CCeEEE---EcCCCH-HHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhh-Ccc-CCceec-ChHHHHH
Confidence 211 111222 34445554333221111000 0000 0 0000 000 000000 1223333
Q ss_pred HHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCC--cceEEEEeCCchhHHHHHHccccccCCCCCCCc
Q 003024 731 LESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRH--ADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNA 808 (856)
Q Consensus 731 L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~--~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~ 808 (856)
+.+.+......+..+..++||.|.++|||.|++++++++ |++ .+++++|||+.||++||+.+|.
T Consensus 150 ~~~~~~~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~---~i~~~~~~~~a~GD~~ND~~Ml~~ag~----------- 215 (256)
T TIGR01486 150 FTEALVELGLEVTHGNRFYHVLGAGSDKGKAANALKQFY---NQPGGAIKVVGLGDSPNDLPLLEVVDL----------- 215 (256)
T ss_pred HHHHHHHcCCEEEeCCceEEEecCCCCHHHHHHHHHHHH---hhcCCCceEEEEcCCHhhHHHHHHCCE-----------
Confidence 444443334455556679999999999999999999999 999 9999999999999999999995
Q ss_pred cEEEEEeCCCc-------cc--cc-eEc--CChhHHHHHHHHH
Q 003024 809 SVFACTVGQKP-------SK--AK-YYL--DDAAEVVTMLEAL 839 (856)
Q Consensus 809 ~~~av~vG~~~-------s~--A~-y~l--~~~~eV~~~L~~L 839 (856)
+|+|||+. .. |. |++ ++.++|++.|+++
T Consensus 216 ---~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 216 ---AVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred ---EEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 56666652 22 34 766 4679999999876
No 48
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.88 E-value=4.8e-21 Score=222.56 Aligned_cols=284 Identities=14% Similarity=0.175 Sum_probs=198.0
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCch-H---HHHHH-hHhCCEEcccCHHH
Q 003024 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVR-E---EILKA-LLNADLIGFHTFDY 267 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r-~---eil~~-ll~~dligf~t~~~ 267 (856)
+++..+| |+|++|+...+.++.++-.+..++|+.+.+|.-+|........++. + .+.+- .-.+|.|...+...
T Consensus 139 ~i~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~ 216 (465)
T PLN02871 139 EVARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPAL 216 (465)
T ss_pred HHHhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHH
Confidence 3444566 9999998776666665544455788999898765542110011110 0 11121 22477777777655
Q ss_pred HHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc----CCCeEEEecc
Q 003024 268 ARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF----EGKTVLLGVD 343 (856)
Q Consensus 268 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~----~~k~iil~Vd 343 (856)
.+.+.. .+. ....++.++|+|||.+.|.+.... ..++.++ +++++|+++|
T Consensus 217 ~~~l~~-----~~~--------------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vG 270 (465)
T PLN02871 217 GKELEA-----AGV--------------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVG 270 (465)
T ss_pred HHHHHH-----cCC--------------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeC
Confidence 555443 010 012356789999999888532211 1223332 3678999999
Q ss_pred CccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCH
Q 003024 344 DMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTL 423 (856)
Q Consensus 344 Rld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~ 423 (856)
|+.+.||+..+++|++++ |++ .|+++| +|+..+ +++++++.. +| .|.|.++.
T Consensus 271 rl~~~K~~~~li~a~~~~----~~~----~l~ivG-----~G~~~~----~l~~~~~~~----------~V-~f~G~v~~ 322 (465)
T PLN02871 271 RLGAEKNLDFLKRVMERL----PGA----RLAFVG-----DGPYRE----ELEKMFAGT----------PT-VFTGMLQG 322 (465)
T ss_pred CCchhhhHHHHHHHHHhC----CCc----EEEEEe-----CChHHH----HHHHHhccC----------Ce-EEeccCCH
Confidence 999999999999988654 554 488777 344433 344443321 23 46789999
Q ss_pred HHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC------CceeeCCC
Q 003024 424 SERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS------GAIRVNPW 497 (856)
Q Consensus 424 ~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------~al~VnP~ 497 (856)
+|+..+|+.||+||+||..||||++++|||||+. |+|+|..+|+.+.+. +|++|+|.
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~-----------------PVI~s~~gg~~eiv~~~~~~~~G~lv~~~ 385 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMASGV-----------------PVVAARAGGIPDIIPPDQEGKTGFLYTPG 385 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHcCC-----------------CEEEcCCCCcHhhhhcCCCCCceEEeCCC
Confidence 9999999999999999999999999999999955 999999999988773 28999999
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHH-HHHHHHh
Q 003024 498 NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQD-MERTCKD 550 (856)
Q Consensus 498 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~-l~~~~~~ 550 (856)
|++++|++|.++++ +++.++...++.++++..+++...++++++. -.++...
T Consensus 386 d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 386 DVDDCVEKLETLLA-DPELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred CHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997 4566666777788888999999999999874 4444443
No 49
>PTZ00174 phosphomannomutase; Provisional
Probab=99.88 E-value=3e-21 Score=205.28 Aligned_cols=198 Identities=14% Similarity=0.155 Sum_probs=128.1
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC--CC-ccEEeeCCEEEEeC
Q 003024 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC--KK-LGIAAEHGYFMRWS 665 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~--~~-lgliaenG~~I~~~ 665 (856)
.++|+|++|+||||++ ++++++++++++|+++ +++|++|+|||||+...+.+.++.. .. ..+++.||+.|+..
T Consensus 3 ~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK---PRNPITQEMKDTLAKL-KSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKD 78 (247)
T ss_pred CCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEEC
Confidence 4589999999999999 8899999999999996 8899999999999999998888532 12 25789999999875
Q ss_pred CCcceEecCCC-CcccHHHHHHHHHHHH-----hhcCCcceEEecccceEEeeecCCC------C---CC--chhHHHHH
Q 003024 666 ADEEWQNCGQS-VDFGWIQIAEPVMKLY-----TESTDGSYIEIKESALVWHHRDADP------G---FG--SSQAKELL 728 (856)
Q Consensus 666 ~~~~w~~~~~~-~~~~w~~~v~~i~~~~-----~~~~~Gs~ie~k~~~l~~~~~~~dp------~---~~--~~~a~el~ 728 (856)
+...+...... .+.++...+....+.+ .....+.+.+.........+..... + +. .....++.
T Consensus 79 ~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (247)
T PTZ00174 79 GELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFI 158 (247)
T ss_pred CeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHH
Confidence 54334332211 2222222222222111 1112233333221111111100000 0 00 01224555
Q ss_pred HHHHHHhcCCCeEEEE-cCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeC----CchhHHHHHHccc
Q 003024 729 DHLESVLANEPAAVKS-GQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGD----DRSDEDMFEIIGN 797 (856)
Q Consensus 729 ~~L~~~l~~~~~~v~~-g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~ 797 (856)
+.+.+.+.+..+.... +..++||.|+|+|||.|+++|+++ +++|+|||| +.||++||+.++.
T Consensus 159 ~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~-------~~eviafGD~~~~~~NDieMl~~~~~ 225 (247)
T PTZ00174 159 QDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND-------FKEIHFFGDKTFEGGNDYEIYNDPRT 225 (247)
T ss_pred HHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh-------hhhEEEEcccCCCCCCcHhhhhcCCC
Confidence 6665555443333333 457999999999999999999996 489999999 8999999998765
No 50
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.87 E-value=2.6e-21 Score=204.49 Aligned_cols=214 Identities=14% Similarity=0.176 Sum_probs=147.4
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-C--ccEEeeCCEEEEeCCCcc
Q 003024 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-K--LGIAAEHGYFMRWSADEE 669 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~--lgliaenG~~I~~~~~~~ 669 (856)
+|++|+||||++ .++.+++.+ ++++ + +++|+.++++|||+...+.+.+..+. . ..++++||+.|......
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~- 73 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-G-SGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPEL- 73 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCC-
Confidence 589999999999 667777766 7776 4 78899999999999999999997653 1 23899999998764321
Q ss_pred eEecCCCCcccHHHHH-----HHHHHHHhhcCCcceEEeccc--ceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEE
Q 003024 670 WQNCGQSVDFGWIQIA-----EPVMKLYTESTDGSYIEIKES--ALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAV 742 (856)
Q Consensus 670 w~~~~~~~~~~w~~~v-----~~i~~~~~~~~~Gs~ie~k~~--~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v 742 (856)
..+..|.... ...+..+....+|..++.+.. ...+++... ++.. ....++.+.+.... .....+
T Consensus 74 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l~~~~-~~~~~~ 144 (236)
T TIGR02471 74 ------QPDRFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRLRQQS-QAAKVI 144 (236)
T ss_pred ------CCChhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHHHhcc-CCEEEE
Confidence 0111121111 011233334456665555432 344555432 2211 12334444444321 112345
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----
Q 003024 743 KSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---- 818 (856)
Q Consensus 743 ~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---- 818 (856)
.++..++|+.|+++|||.|++++++++ |++++++++|||+.||++||+.++. +++||++
T Consensus 145 ~~~~~~~ei~~~~~~K~~al~~l~~~~---g~~~~~~i~~GD~~nD~~ml~~~~~--------------~iav~na~~~~ 207 (236)
T TIGR02471 145 LSCGWFLDVLPLRASKGLALRYLSYRW---GLPLEQILVAGDSGNDEEMLRGLTL--------------GVVVGNHDPEL 207 (236)
T ss_pred EECCceEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEEcCCccHHHHHcCCCc--------------EEEEcCCcHHH
Confidence 677789999999999999999999999 9999999999999999999999875 5677775
Q ss_pred ccccc----eEcC--ChhHHHHHHHHH
Q 003024 819 PSKAK----YYLD--DAAEVVTMLEAL 839 (856)
Q Consensus 819 ~s~A~----y~l~--~~~eV~~~L~~L 839 (856)
+..|+ |+++ +.++|.+.|+.+
T Consensus 208 k~~a~~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 208 EGLRHQQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred HHhhcCCcEEEcCCCChhHHHHHHHhh
Confidence 46677 6664 468899999864
No 51
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.87 E-value=6.5e-21 Score=205.89 Aligned_cols=226 Identities=13% Similarity=0.100 Sum_probs=147.7
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCC
Q 003024 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSAD 667 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~ 667 (856)
.++|+|++|+||||++ .++.+++++.++|++| ++.|+.|+|||||+...+...+..+. ..++++.||++|+.+++
T Consensus 2 ~~~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l-~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~ 77 (273)
T PRK00192 2 MMKLLVFTDLDGTLLD---HHTYSYEPAKPALKAL-KEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKN 77 (273)
T ss_pred CcceEEEEcCcccCcC---CCCcCcHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEeccc
Confidence 3689999999999998 6778889999999997 88899999999999999999887654 33689999999987543
Q ss_pred c-------------ceEecCCCCcccHHHHHHHHHHHHhhcCCcce-EEec----c----cceEE---e-eecCCC--CC
Q 003024 668 E-------------EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSY-IEIK----E----SALVW---H-HRDADP--GF 719 (856)
Q Consensus 668 ~-------------~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~-ie~k----~----~~l~~---~-~~~~dp--~~ 719 (856)
. .|... ...+ .+.+.++++.+.......+ .... . ..+.. . ...... .+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T PRK00192 78 YFPFQPDGERLKGDYWVIE---LGPP-YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPF 153 (273)
T ss_pred ccccCCccccccCCceEEE---cCCC-HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCce
Confidence 1 12111 1111 1333333332222111000 0000 0 00000 0 000000 00
Q ss_pred CchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCc-ceEEEEeCCchhHHHHHHcccc
Q 003024 720 GSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHA-DFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 720 ~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
......+..+.+...+......+..++.++||.|.+ +||.+++++++++ |+++ +++++|||+.||++||+.+|.
T Consensus 154 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~---~i~~~~~v~~~GDs~NDi~m~~~ag~- 228 (273)
T PRK00192 154 LWNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELY---RRQDGVETIALGDSPNDLPMLEAADI- 228 (273)
T ss_pred eecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHH---hccCCceEEEEcCChhhHHHHHhCCe-
Confidence 000012333444444443445555677899999999 9999999999999 9999 999999999999999999995
Q ss_pred ccCCCCCCCccEEEEEeCCCc--------ccc-ceEc----CChhHHHHHHHHHH
Q 003024 799 TSSGVLSSNASVFACTVGQKP--------SKA-KYYL----DDAAEVVTMLEALA 840 (856)
Q Consensus 799 ~~~~~~~~~~~~~av~vG~~~--------s~A-~y~l----~~~~eV~~~L~~L~ 840 (856)
+|+|||++ ..| +++. ++.++|++.|+++.
T Consensus 229 -------------~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~ 270 (273)
T PRK00192 229 -------------AVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLL 270 (273)
T ss_pred -------------eEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHH
Confidence 56677642 333 3554 34789999999875
No 52
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.86 E-value=2e-20 Score=217.99 Aligned_cols=309 Identities=17% Similarity=0.204 Sum_probs=203.4
Q ss_pred HHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccchHHHHHHhhc-----CCCeEEEEEccCCCCh----HHHhc--CCc-
Q 003024 180 EAYVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRRF-----TRLRMGFFLHSPFPSS----EIYRT--LPV- 246 (856)
Q Consensus 180 ~~Y~~vN~~fa~~i~~~-~~~~~D~VwihDyhl~llp~~lr~~~-----~~~~i~~flH~PfP~~----e~~~~--lp~- 246 (856)
..|...++...+.+.+. .+| |+|++||+|-.++|.++++.+ .++|+.|..|.+.+.. ..+.. +++
T Consensus 110 ~~~~~f~~~~~~~l~~~~~~p--DviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~ 187 (476)
T cd03791 110 ERFALFSRAALELLRRLGWKP--DIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWE 187 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--cEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCcc
Confidence 34444555555544432 345 999999999999999998874 5899999999875421 11111 111
Q ss_pred -------------hHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEE--ECCEEEEEEEeecccCch
Q 003024 247 -------------REEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLE--YYGRTVGIKIMPVGIHMG 311 (856)
Q Consensus 247 -------------r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--~~gr~~~i~i~p~GId~~ 311 (856)
..-+..++..||.|-.-+..|++..++.- .| .+++ ...+..++.++|+|||.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-----------~~-~gl~~~~~~~~~ki~~I~NGid~~ 255 (476)
T cd03791 188 ELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-----------FG-EGLDGLLRARAGKLSGILNGIDYD 255 (476)
T ss_pred chhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-----------CC-cchHHHHHhccCCeEEEeCCCcCc
Confidence 01122345556666555555555443200 00 0000 112335778899999998
Q ss_pred HHHHHhcCc-----------hHHHHHHHHHHHc-----CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEE
Q 003024 312 QIESVLRLA-----------DKDWRVQELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLV 375 (856)
Q Consensus 312 ~~~~~~~~~-----------~~~~~~~~l~~~~-----~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLv 375 (856)
.|.+..... ........+++++ +++++|+++||+.+.||+..+++|++++.+++ +.|+
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lv 329 (476)
T cd03791 256 VWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLV 329 (476)
T ss_pred ccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEE
Confidence 886432110 0112234456655 46789999999999999999999999987653 4577
Q ss_pred EEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeee
Q 003024 376 QIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVC 455 (856)
Q Consensus 376 qi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~ 455 (856)
.+|.. + .++++++++++.+.. ..++++.+ .+.+++..+|+.||++++||..||+|++.+|||+|
T Consensus 330 i~G~g-----~--~~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~ 393 (476)
T cd03791 330 ILGSG-----D--PEYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY 393 (476)
T ss_pred EEecC-----C--HHHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhC
Confidence 77743 1 234555666555431 12555554 45777789999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCceEEecCCccccccc-C--------CceeeCCCCHHHHHHHHHHHHcCC--HHHHHHHHHHH
Q 003024 456 RQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S--------GAIRVNPWNIEATAEAMHEAIQMN--EAEKQLRHEKH 524 (856)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~ 524 (856)
+. |+|+|..+|..+.+ + +|++|.|.|+++++++|.+++++. ++++....++.
T Consensus 394 G~-----------------pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~ 456 (476)
T cd03791 394 GT-----------------VPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNA 456 (476)
T ss_pred CC-----------------CCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 54 99999999999988 3 599999999999999999998642 23333333332
Q ss_pred hhhhhcCCHHHHHHHHHHH
Q 003024 525 YRYVSTHDVAYWARSFFQD 543 (856)
Q Consensus 525 ~~~v~~~~~~~W~~~~l~~ 543 (856)
.+ ..+++..-++++++-
T Consensus 457 ~~--~~fsw~~~a~~~~~~ 473 (476)
T cd03791 457 MA--QDFSWDRSAKEYLEL 473 (476)
T ss_pred hc--cCCChHHHHHHHHHH
Confidence 22 346777777766654
No 53
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.86 E-value=3.4e-20 Score=208.93 Aligned_cols=207 Identities=14% Similarity=0.172 Sum_probs=157.9
Q ss_pred EEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc--CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEE
Q 003024 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ 376 (856)
Q Consensus 299 ~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 376 (856)
.++.++|+|||.+.|.+... . .....++.+ .++.+|+++||+++.||+..+++|+..+++++|+...++.|+.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~---~--~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i 234 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRG---D--RSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVI 234 (374)
T ss_pred hhEEEeccCccccccCCCcc---c--hhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEE
Confidence 35677899999987753211 1 111112222 4678999999999999999999999999999987666788998
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeee
Q 003024 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (856)
Q Consensus 377 i~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 456 (856)
+|. |+..++++ +.+++. +....+++.|. .+++..+|+.||++|+||..||||++++|||+|+
T Consensus 235 ~G~-----g~~~~~~~----~~~~~~-------~~~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G 296 (374)
T TIGR03088 235 VGD-----GPARGACE----QMVRAA-------GLAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG 296 (374)
T ss_pred ecC-----CchHHHHH----HHHHHc-------CCcceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC
Confidence 874 33333343 333332 34456777774 5789999999999999999999999999999995
Q ss_pred cCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCC
Q 003024 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHD 532 (856)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~ 532 (856)
. |+|+|+.+|..+.+. .|++++|.|++++|++|.++++. ++++....++.++++ ..++
T Consensus 297 ~-----------------Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs 358 (374)
T TIGR03088 297 L-----------------PVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSD-PAARRAHGAAGRARAEQQFS 358 (374)
T ss_pred C-----------------CEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCC
Confidence 5 999999999998883 38999999999999999999974 455555666777776 5789
Q ss_pred HHHHHHHHHHHHHH
Q 003024 533 VAYWARSFFQDMER 546 (856)
Q Consensus 533 ~~~W~~~~l~~l~~ 546 (856)
+...++++.+-..+
T Consensus 359 ~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 359 INAMVAAYAGLYDQ 372 (374)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888887765543
No 54
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.86 E-value=4.6e-20 Score=208.51 Aligned_cols=284 Identities=20% Similarity=0.203 Sum_probs=200.3
Q ss_pred CEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcC-----C-chH-HHHHHhHhCCEEcccCHHHHHHHHHH
Q 003024 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTL-----P-VRE-EILKALLNADLIGFHTFDYARHFLSC 274 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~l-----p-~r~-eil~~ll~~dligf~t~~~~~~Fl~~ 274 (856)
|+|.+|++....+...+.+. .++++.+..|............ + .+. .....+..+|.+.+.+......+...
T Consensus 103 Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 181 (398)
T cd03800 103 DLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEELYSL 181 (398)
T ss_pred cEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH
Confidence 99999998777766666544 4788999999765422111000 0 011 11234557899988887666555431
Q ss_pred HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHH
Q 003024 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (856)
Q Consensus 275 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~ 354 (856)
.+ ....++.++|+|+|...+...... .....++. ...++.+|+++||+++.||+..+
T Consensus 182 ----~~---------------~~~~~~~vi~ng~~~~~~~~~~~~---~~~~~~~~-~~~~~~~i~~~gr~~~~k~~~~l 238 (398)
T cd03800 182 ----YG---------------AYPRRIRVVPPGVDLERFTPYGRA---EARRARLL-RDPDKPRILAVGRLDPRKGIDTL 238 (398)
T ss_pred ----cc---------------ccccccEEECCCCCccceecccch---hhHHHhhc-cCCCCcEEEEEcccccccCHHHH
Confidence 00 111236789999998877532211 11111111 11467899999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 003024 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAE 434 (856)
Q Consensus 355 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 434 (856)
++|+..+.+++|+++ |+.+|....... .....+++.++++. +..+.+.+.+.++.+++..+|+.||
T Consensus 239 l~a~~~l~~~~~~~~----l~i~G~~~~~~~---~~~~~~~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~~~ad 304 (398)
T cd03800 239 IRAYAELPELRERAN----LVIVGGPRDDIL---AMDEEELRELAREL-------GVIDRVDFPGRVSREDLPALYRAAD 304 (398)
T ss_pred HHHHHHHHHhCCCeE----EEEEECCCCcch---hhhhHHHHHHHHhc-------CCCceEEEeccCCHHHHHHHHHhCC
Confidence 999999988877654 888886442221 22233445555443 2334566788999999999999999
Q ss_pred eeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHc
Q 003024 435 CVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQ 511 (856)
Q Consensus 435 v~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~ 511 (856)
++++||..||+|++++|||+|+. |+|+|+.+|..+.+. .|++++|.|+++++++|.++++
T Consensus 305 i~l~ps~~e~~~~~l~Ea~a~G~-----------------Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~ 367 (398)
T cd03800 305 VFVNPALYEPFGLTALEAMACGL-----------------PVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLT 367 (398)
T ss_pred EEEecccccccCcHHHHHHhcCC-----------------CEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999955 999999999998883 3899999999999999999997
Q ss_pred CCHHHHHHHHHHHhhhh-hcCCHHHHHHHHH
Q 003024 512 MNEAEKQLRHEKHYRYV-STHDVAYWARSFF 541 (856)
Q Consensus 512 m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 541 (856)
. +++++...++.++++ +.+++..++++++
T Consensus 368 ~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 368 D-PALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred C-HHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 5 455555666667777 7789888888765
No 55
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.86 E-value=1.1e-19 Score=216.14 Aligned_cols=338 Identities=12% Similarity=0.117 Sum_probs=206.1
Q ss_pred hHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCC----ChHH-HhcCC-----
Q 003024 176 RSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFP----SSEI-YRTLP----- 245 (856)
Q Consensus 176 ~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~e~-~~~lp----- 245 (856)
.+.|......+...++.+........|+|+.|...=-++...|+++. +++..+..|+.=. .+.. +....
T Consensus 361 ~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~ 439 (784)
T TIGR02470 361 FEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHF 439 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHh
Confidence 45677777777777776655443223999999766666777776655 6888888885411 1110 01011
Q ss_pred -ch-HHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecc-cCceeeEEECC---EEEEEEEeecccCchHHHHHhcC
Q 003024 246 -VR-EEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQS-KRGYIGLEYYG---RTVGIKIMPVGIHMGQIESVLRL 319 (856)
Q Consensus 246 -~r-~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~-~~~~~~~~~~g---r~~~i~i~p~GId~~~~~~~~~~ 319 (856)
.+ +.=+..|-.||.|--.|+.-...-...+.. .+..... ..+...+ .+| ..-++.++|+|+|+..|.+....
T Consensus 440 ~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~v-vnGid~~~~Ki~VVpPGVD~~iF~P~~~~ 517 (784)
T TIGR02470 440 SCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRV-VHGIDVFDPKFNIVSPGADESIYFPYSDK 517 (784)
T ss_pred hhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeee-ecCccCCcCCeEEECCCcChhhcCCCCch
Confidence 01 001255667888876664221110000000 0000000 0010111 111 12377889999999988653221
Q ss_pred chHH-HHH----------HHHHHHc-----CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCC
Q 003024 320 ADKD-WRV----------QELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARG 383 (856)
Q Consensus 320 ~~~~-~~~----------~~l~~~~-----~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~ 383 (856)
.... ... ...++.+ +++++|++|+|+++.||+..+++||.++.+..+ .+.||+||.+...
T Consensus 518 ~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGGg~~~ 593 (784)
T TIGR02470 518 EKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAGKLDA 593 (784)
T ss_pred hhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeCCccc
Confidence 1000 000 0112222 468899999999999999999999987644333 4568888864321
Q ss_pred ---CchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCC-CCHHHHHHHHH----hcceeeeccccccCCCcccceeee
Q 003024 384 ---RGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP-VTLSERAAYYT----IAECVVVTAVRDGMNLTPYEYIVC 455 (856)
Q Consensus 384 ---~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~-v~~~el~aly~----~ADv~vvtS~~EG~nLv~~Ea~a~ 455 (856)
...+..+..+++.+++++.+- ...+.+.|. .+..++..+|+ .+||||+||.+||||||++|||||
T Consensus 594 ~~s~d~ee~~~i~~L~~la~~~gL-------~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAc 666 (784)
T TIGR02470 594 KESKDREEQAEIEKMHNLIDQYQL-------HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTC 666 (784)
T ss_pred ccccchhHHHHHHHHHHHHHHhCC-------CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHc
Confidence 111222234556666665432 223445554 35556666665 247999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHhhhh-
Q 003024 456 RQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQ---MNEAEKQLRHEKHYRYV- 528 (856)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v- 528 (856)
+. |+|+|..+|+.+.+. .|++|+|.|++++|++|.++++ .+++.+....++.++++
T Consensus 667 Gl-----------------PVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~ 729 (784)
T TIGR02470 667 GL-----------------PTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIY 729 (784)
T ss_pred CC-----------------CEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 54 999999999999883 4899999999999999999874 34555555666666766
Q ss_pred hcCCHHHHHHHHHHHH
Q 003024 529 STHDVAYWARSFFQDM 544 (856)
Q Consensus 529 ~~~~~~~W~~~~l~~l 544 (856)
+.++|...+++++.-+
T Consensus 730 ~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 730 EKYTWKIYSERLLTLA 745 (784)
T ss_pred HhCCHHHHHHHHHHHH
Confidence 5689888888877654
No 56
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.86 E-value=8.5e-20 Score=206.39 Aligned_cols=285 Identities=15% Similarity=0.137 Sum_probs=199.4
Q ss_pred CCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHH-----hcCCchHHH-HHHhHhCCEEcccCHHHHHHHHHH
Q 003024 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIY-----RTLPVREEI-LKALLNADLIGFHTFDYARHFLSC 274 (856)
Q Consensus 201 ~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~-----~~lp~r~ei-l~~ll~~dligf~t~~~~~~Fl~~ 274 (856)
.|+|++|++...+.+.++ ++..++|+.+.+|..+|..... ........+ ...+-.+|.|-..+....+.+.+.
T Consensus 84 ~divh~~~~~~~~~~~~~-~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLA-KKLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHH-HHhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 499999998876555544 4456889999999876532111 000001111 223456787777776555555431
Q ss_pred HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccCCH
Q 003024 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGV 351 (856)
Q Consensus 275 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~KGi 351 (856)
. -+. ...++.++|+|+|...+.+. . ...+++++ .++++|+++||+.+.||+
T Consensus 163 ~---~~~---------------~~~~i~vi~ng~~~~~~~~~----~----~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 Y---PDL---------------DPEKVHVIYNGIDTKEYKPD----D----GNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred c---CCC---------------CcceEEEecCCCChhhcCCC----c----hHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0 010 12356788999998877521 1 12233333 467799999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHH
Q 003024 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (856)
Q Consensus 352 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 431 (856)
..+++|++++. ++ +.|+.++.. ++..++.+++++.+...+... ..++++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~----~~l~i~g~g-----~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KD----VQVVLCAGA-----PDTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hc----CcEEEEeCC-----CCcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHH
Confidence 99999999873 33 336665532 222345556666655544322 23677888999999999999
Q ss_pred hcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCH------HHH
Q 003024 432 IAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNI------EAT 502 (856)
Q Consensus 432 ~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~------~~~ 502 (856)
.||+||+||..||||++.+|||+|+. |+|+|..+|..+.+. .|++++|.|. +++
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~G~-----------------PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l 342 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMACGT-----------------PVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAEL 342 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHcCC-----------------CEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHH
Confidence 99999999999999999999999954 999999999888873 3899999999 999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHHHHHHHHHH
Q 003024 503 AEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMERT 547 (856)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 547 (856)
+++|.++++ ++++++...++.++++ ..+++..+++++++.++++
T Consensus 343 ~~~i~~l~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 343 AKAINILLA-DPELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 999999997 4555555566666665 5689999999988776653
No 57
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.86 E-value=5.8e-20 Score=204.41 Aligned_cols=281 Identities=17% Similarity=0.203 Sum_probs=196.0
Q ss_pred HHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHh-HhCCEEcccCHHHHHH
Q 003024 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL-LNADLIGFHTFDYARH 270 (856)
Q Consensus 192 ~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l-l~~dligf~t~~~~~~ 270 (856)
++++..+| |+|++|.+|..++..+++...+..++....|...+...+ +..+.+-. ..++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 44566677 899999999888888887777777888888864332111 11111110 1134443344444444
Q ss_pred HHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccc
Q 003024 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDI 347 (856)
Q Consensus 271 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~ 347 (856)
|+.. + .-...++.++|+|+|...|.... .....+++++ +++++++++||+.+
T Consensus 145 ~~~~-----~--------------~~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIAS-----K--------------AFNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhc-----c--------------CCCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 4321 0 00123567789999987764211 1223345554 46789999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHH
Q 003024 348 FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (856)
Q Consensus 348 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~ 427 (856)
.||+..+++|+.++.+++|+++ |+++|. |+..++++ +.+.+.| ..+.+.+.+. .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~~~----~~~~~~~-------~~~~v~~~g~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRATLE----RLIKALG-------LSNRVKLLGL--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHHHH----HHHHhcC-------CCCcEEEecc--cccHH
Confidence 9999999999999999888755 777763 33333333 3333322 2334455555 46899
Q ss_pred HHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC-CceeeCCCCHHHHHHHH
Q 003024 428 AYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAM 506 (856)
Q Consensus 428 aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai 506 (856)
.+|+.||++++||..||||++++|||+|+. |+|+|+.+|..+.+. .|+.++|.|++++|++|
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-----------------PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i 320 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMACEL-----------------PVVATDAGGVREVVGDSGLIVPISDPEALANKI 320 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHcCC-----------------CEEEecCCChhhEecCCceEeCCCCHHHHHHHH
Confidence 999999999999999999999999999955 999999999888884 58999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHH
Q 003024 507 HEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (856)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (856)
.++++.++..+..+.++.....+.+++..+++++++-.
T Consensus 321 ~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 321 DEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 99998777777666665334456789999988887643
No 58
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.86 E-value=1.3e-20 Score=197.08 Aligned_cols=196 Identities=17% Similarity=0.126 Sum_probs=124.2
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-C-ccEEeeCCEEEEeCCC-cc
Q 003024 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-K-LGIAAEHGYFMRWSAD-EE 669 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~-lgliaenG~~I~~~~~-~~ 669 (856)
+|++|+||||++ +++.+++.++++|++| +++|+.|+++|||+...+..++..+. . .++|++||+.|+.... ..
T Consensus 1 ~i~~DlDGTLL~---~~~~~~~~~~~~l~~l-~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 76 (221)
T TIGR02463 1 WVFSDLDGTLLD---SHSYDWQPAAPWLTRL-QEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWRE 76 (221)
T ss_pred CEEEeCCCCCcC---CCCCCcHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc
Confidence 589999999998 6665666799999997 88999999999999999999997764 2 4699999999986432 11
Q ss_pred e---EecCCCCcccHHHHHHHHHHHHhhcCCc-ceEEecc--------cceEE------eeecCCCCCCchhHHHHHHHH
Q 003024 670 W---QNCGQSVDFGWIQIAEPVMKLYTESTDG-SYIEIKE--------SALVW------HHRDADPGFGSSQAKELLDHL 731 (856)
Q Consensus 670 w---~~~~~~~~~~w~~~v~~i~~~~~~~~~G-s~ie~k~--------~~l~~------~~~~~dp~~~~~~a~el~~~L 731 (856)
+ .... ...+| +.+.++++...+...- ....... ..+.. ........+......+..+.+
T Consensus 77 ~~~~~~~~--~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (221)
T TIGR02463 77 EPGYPRII--LGISY-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRF 153 (221)
T ss_pred CCCceEEe--cCCCH-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHH
Confidence 1 1110 11122 2233333322111000 0000000 00000 000000000000012223333
Q ss_pred HHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 732 ESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 732 ~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
.+.+......+..+..++||.|.+++||.|++++++++ |++++++++|||+.||++||+.+|.+
T Consensus 154 ~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~l---gi~~~~vi~~GD~~NDi~ml~~ag~~ 217 (221)
T TIGR02463 154 TALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATY---NQPDVKTLGLGDGPNDLPLLEVADYA 217 (221)
T ss_pred HHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHh---CCCCCcEEEECCCHHHHHHHHhCCce
Confidence 33333334555556789999999999999999999999 99999999999999999999999964
No 59
>PLN00142 sucrose synthase
Probab=99.86 E-value=8.2e-20 Score=217.21 Aligned_cols=333 Identities=13% Similarity=0.163 Sum_probs=204.1
Q ss_pred hHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccC-----------CCChH-HHhc
Q 003024 176 RSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSP-----------FPSSE-IYRT 243 (856)
Q Consensus 176 ~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~P-----------fP~~e-~~~~ 243 (856)
.+.|..-.+.+...++.+....+...|+|+-|.+.=-++...|+++. +++..+..|+- |...+ -|+.
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~ 462 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHF 462 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhh
Confidence 46677777777777777655443123999999555556666666655 79999999942 21111 1111
Q ss_pred -CCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCc---------eeeEEECCEEEEEEEeecccCchHH
Q 003024 244 -LPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRG---------YIGLEYYGRTVGIKIMPVGIHMGQI 313 (856)
Q Consensus 244 -lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~---------~~~~~~~gr~~~i~i~p~GId~~~~ 313 (856)
+-...|.+ .|-.||.|--.|+.-....-... + .|.+-.+ .-+++++ .-++.++|+|+|...|
T Consensus 463 ~~r~~aE~~-a~~~Ad~IIasT~qEi~g~~~~i----~-qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F 534 (815)
T PLN00142 463 SCQFTADLI-AMNHADFIITSTYQEIAGSKDTV----G-QYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIY 534 (815)
T ss_pred hhchHHHHH-HHHhhhHHHhCcHHHHhcccchh----h-hhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhc
Confidence 11111221 44566665544432211000000 0 0000000 0011111 1267789999999988
Q ss_pred HHHhcCc--------hHHHHH---HHHHHHc-----CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEE
Q 003024 314 ESVLRLA--------DKDWRV---QELKQQF-----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQI 377 (856)
Q Consensus 314 ~~~~~~~--------~~~~~~---~~l~~~~-----~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi 377 (856)
.+..... ...... ...++.+ +++++|++|+|+++.||+..+++||.++.+..++ +.|+++
T Consensus 535 ~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LVIV 610 (815)
T PLN00142 535 FPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLVVV 610 (815)
T ss_pred CCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEEEE
Confidence 6421100 000000 0011111 3577999999999999999999999988666554 558888
Q ss_pred ecCCC-CCchhHH--HHHHHHHHHHHHHhcccCCCCcccEEEEc---CCCCHHHHHHHHH-hcceeeeccccccCCCccc
Q 003024 378 ANPAR-GRGKDLE--EIQAEIHATCKRINETFGRPGYEPVVFID---KPVTLSERAAYYT-IAECVVVTAVRDGMNLTPY 450 (856)
Q Consensus 378 ~~p~r-~~~~~~~--~l~~~~~~lv~~IN~~~~~~~~~pvv~~~---~~v~~~el~aly~-~ADv~vvtS~~EG~nLv~~ 450 (856)
|.+.. ...++.+ +..+++.+++++.+-. + .|.++. +..+..+++.+|+ ++|+||+||.+||||+|++
T Consensus 611 Ggg~d~~~s~d~ee~~el~~L~~La~~lgL~----~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvL 684 (815)
T PLN00142 611 GGFIDPSKSKDREEIAEIKKMHSLIEKYNLK----G--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVV 684 (815)
T ss_pred ECCccccccccHHHHHHHHHHHHHHHHcCCC----C--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHH
Confidence 86411 1111211 1224455666654321 1 143332 2455678888777 5799999999999999999
Q ss_pred ceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHc---CCHHHHHHHHHHH
Q 003024 451 EYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQ---MNEAEKQLRHEKH 524 (856)
Q Consensus 451 Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~ 524 (856)
|||||+. |+|+|..+|+.+.+. .|++|+|.|++++|++|.+++. .+++.+....++.
T Consensus 685 EAMA~Gl-----------------PVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~A 747 (815)
T PLN00142 685 EAMTCGL-----------------PTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAG 747 (815)
T ss_pred HHHHcCC-----------------CEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 9999954 999999999999883 3899999999999999988763 3566666666676
Q ss_pred hhhh-hcCCHHHHHHHHHHHH
Q 003024 525 YRYV-STHDVAYWARSFFQDM 544 (856)
Q Consensus 525 ~~~v-~~~~~~~W~~~~l~~l 544 (856)
++.+ +.+++...++++++-.
T Consensus 748 r~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 748 LQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHhCCHHHHHHHHHHHH
Confidence 7776 5689999888877644
No 60
>PLN02382 probable sucrose-phosphatase
Probab=99.85 E-value=2.6e-20 Score=210.98 Aligned_cols=230 Identities=15% Similarity=0.181 Sum_probs=148.8
Q ss_pred cCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHH-HHHHhhCCCeEEEecCCChhhHHHhhcCCC---CccEEeeCCEEEE
Q 003024 588 RSKSRAILFDYDGTVMPQTSINKAPSQAVISII-NTLCNDARNTVFVVSGRGRDCLGKWFSPCK---KLGIAAEHGYFMR 663 (856)
Q Consensus 588 ~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL-~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~---~lgliaenG~~I~ 663 (856)
.+.+.+|++|+||||++.. .++.++.....+| +++ .++|+.++++|||+...+.++...++ .-.+++.||+.|.
T Consensus 6 ~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~-~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~ 83 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAE-YRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIA 83 (413)
T ss_pred CCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHh-hcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEE
Confidence 4567899999999999822 1447776666665 775 78899999999999888777765432 1236778999998
Q ss_pred eCCCc----ceEecCCCCcccHHHH-HHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCC
Q 003024 664 WSADE----EWQNCGQSVDFGWIQI-AEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE 738 (856)
Q Consensus 664 ~~~~~----~w~~~~~~~~~~w~~~-v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~ 738 (856)
..+.. .|.... +..|... +.+.+..|.........+.+..++.+...+. ...++.+.+.+.+...
T Consensus 84 ~~~~~~~d~~w~~~l---~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~-------~~~~~~~~l~~~~~~~ 153 (413)
T PLN02382 84 YGESMVPDHGWVEYL---NKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK-------KAQEVIKELSERLEKR 153 (413)
T ss_pred eCCCCccChhHHHHH---hccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH-------HhHHHHHHHHHHHHhc
Confidence 75421 122111 1122211 1111111211111122223333444433221 1334455555555332
Q ss_pred ---CeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEe
Q 003024 739 ---PAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTV 815 (856)
Q Consensus 739 ---~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v 815 (856)
...+.++..++||.|+++|||.|+++|++++...|++++++++|||+.||++||+.++. ++|+|
T Consensus 154 g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~-------------~gvam 220 (413)
T PLN02382 154 GLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDV-------------YGVMV 220 (413)
T ss_pred CCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCC-------------CEEEE
Confidence 24456888999999999999999999999986568899999999999999999999983 26777
Q ss_pred CCCc----c--------ccceEc---CChhHHHHHHHHHHHh
Q 003024 816 GQKP----S--------KAKYYL---DDAAEVVTMLEALAEA 842 (856)
Q Consensus 816 G~~~----s--------~A~y~l---~~~~eV~~~L~~L~~~ 842 (856)
||+. . .|++++ .+.+++.+.|+.+.-.
T Consensus 221 ~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~l~ 262 (413)
T PLN02382 221 SNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFNLG 262 (413)
T ss_pred cCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhCCC
Confidence 7752 2 235553 2579999999998743
No 61
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.85 E-value=1e-19 Score=208.38 Aligned_cols=195 Identities=16% Similarity=0.108 Sum_probs=145.7
Q ss_pred EEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCc-CceEEEEEe
Q 003024 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQ-GRAVLVQIA 378 (856)
Q Consensus 300 ~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~-~~vvLvqi~ 378 (856)
++.++++|+|.+.|.+.. . ....++.+|++++|+.+.||+...|+||.++.+++|+.. .++.|+++|
T Consensus 213 ~~~vi~~gvd~~~~~~~~---~---------~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG 280 (419)
T cd03806 213 KPSIVYPPCDVEELLKLP---L---------DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIG 280 (419)
T ss_pred CcEEEcCCCCHHHhcccc---c---------ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEc
Confidence 567789999988775221 0 012456799999999999999999999999999887631 246688888
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecC
Q 003024 379 NPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQG 458 (856)
Q Consensus 379 ~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~ 458 (856)
.... .+..++.+++++++++.+ ..+.+.|.+.++.+++.++|+.||++|.||..||||++++|||||+.
T Consensus 281 ~~~~---~~~~~~~~~L~~~~~~l~-------l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~- 349 (419)
T cd03806 281 SCRN---EDDEKRVEDLKLLAKELG-------LEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGL- 349 (419)
T ss_pred CCCC---cccHHHHHHHHHHHHHhC-------CCCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCC-
Confidence 5321 111234556666666543 33456777899999999999999999999999999999999999954
Q ss_pred CCCCCCCCCCCCCCCceEEecCCccccc-ccC------CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcC
Q 003024 459 VSGSESSSESSAPKKSMLVVSEFIGCSP-SLS------GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTH 531 (856)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~-~l~------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 531 (856)
|+|+|..+|..+ .+. .|++++ |++++|++|.+++++++.+++.+.++.++....+
T Consensus 350 ----------------pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~f 411 (419)
T cd03806 350 ----------------IPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRF 411 (419)
T ss_pred ----------------cEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 899999888654 343 378874 9999999999999998877766544444444555
Q ss_pred CHHH
Q 003024 532 DVAY 535 (856)
Q Consensus 532 ~~~~ 535 (856)
+...
T Consensus 412 s~~~ 415 (419)
T cd03806 412 SDEE 415 (419)
T ss_pred CHHH
Confidence 5443
No 62
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.85 E-value=9.4e-20 Score=212.24 Aligned_cols=300 Identities=15% Similarity=0.129 Sum_probs=201.1
Q ss_pred CcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCCh---HHHhc---CCc
Q 003024 173 RFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSS---EIYRT---LPV 246 (856)
Q Consensus 173 ~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~~~~---lp~ 246 (856)
.|..-.|....-..-.+. .+...+ |+.|+|++|......++..+.++..+.|+.+..|--+|.. ++... .+.
T Consensus 148 ~~~~~~~~~~~~~~~l~~-~l~~~~-~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~ 225 (475)
T cd03813 148 SFVDYFWTVRNMLSPLLA-AIARPL-PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSY 225 (475)
T ss_pred CHHHHHHHHHHHHHHHHH-HhccCC-CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHH
Confidence 344445543333333332 333333 3459999998776666676666666899999999755421 22211 000
Q ss_pred hHHH--------HH-HhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHh
Q 003024 247 REEI--------LK-ALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVL 317 (856)
Q Consensus 247 r~ei--------l~-~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~ 317 (856)
...+ .+ .+-.||.|...+... +..+. .++....++.++|+|||.+.|.+..
T Consensus 226 ~~~~~~~~~~~l~~~~~~~ad~Ii~~s~~~-~~~~~-------------------~~g~~~~ki~vIpNgid~~~f~~~~ 285 (475)
T cd03813 226 FRRLWIRFFESLGRLAYQAADRITTLYEGN-RERQI-------------------EDGADPEKIRVIPNGIDPERFAPAR 285 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEEEecCHHH-HHHHH-------------------HcCCCHHHeEEeCCCcCHHHcCCcc
Confidence 0111 01 112345444333221 11111 1122234677899999998875321
Q ss_pred cCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHH
Q 003024 318 RLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHA 397 (856)
Q Consensus 318 ~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~ 397 (856)
. . ....++++|+++||+.+.||+..+++|+..+.++.|+++ |+++|... +..++.+++++
T Consensus 286 ~-----~------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g~-----~~~~~~~e~~~ 345 (475)
T cd03813 286 R-----A------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPTD-----EDPEYAEECRE 345 (475)
T ss_pred c-----c------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEECCCC-----cChHHHHHHHH
Confidence 1 0 112467899999999999999999999999999888765 77777432 22355667777
Q ss_pred HHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEE
Q 003024 398 TCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLV 477 (856)
Q Consensus 398 lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV 477 (856)
++++.+. .+.+.|.| ..++..+|+.||++|+||..|||+++++|||||+. |+|
T Consensus 346 li~~l~l-------~~~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-----------------PVV 398 (475)
T cd03813 346 LVESLGL-------EDNVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-----------------PVV 398 (475)
T ss_pred HHHHhCC-------CCeEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-----------------CEE
Confidence 7777543 23555666 57899999999999999999999999999999955 999
Q ss_pred ecCCccccccc-C--------CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc-CCHHHHHHHHHH
Q 003024 478 VSEFIGCSPSL-S--------GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFFQ 542 (856)
Q Consensus 478 ~Se~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~ 542 (856)
+|+.+|+.+.+ . .|++|+|.|++++|++|.++++. +++++...++.++++.+ +++...++++.+
T Consensus 399 atd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~-~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 399 ATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKD-PELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred ECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999998888 3 38999999999999999999984 55666666777777766 466666666544
No 63
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.85 E-value=1.5e-19 Score=202.28 Aligned_cols=274 Identities=17% Similarity=0.115 Sum_probs=191.5
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCC----CChHHHhcCCchHHHHH-HhHhCCEEcccCHHH
Q 003024 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPF----PSSEIYRTLPVREEILK-ALLNADLIGFHTFDY 267 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~e~~~~lp~r~eil~-~ll~~dligf~t~~~ 267 (856)
+++..+| |+|++|+.+..+....+.+ ..++|+.+.+|.-. +.............+.+ .+-.+|.|-+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 5566677 8999997764443333333 34688988888422 11111110001112222 234578888777654
Q ss_pred HHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccc
Q 003024 268 ARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDI 347 (856)
Q Consensus 268 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~ 347 (856)
.+.+.+. |. ...++.++|+|+|.+.+.+.. ...+++.++++||+.+
T Consensus 154 ~~~~~~~-----~~---------------~~~~i~vi~~g~d~~~~~~~~--------------~~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLAL-----GF---------------PPEKVHVHPIGVDTAKFTPAT--------------PARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHHc-----CC---------------CHHHeEEecCCCCHHhcCCCC--------------CCCCCcEEEEEEeecc
Confidence 4444431 21 123466789999987764210 0134678999999999
Q ss_pred cCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHH
Q 003024 348 FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERA 427 (856)
Q Consensus 348 ~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~ 427 (856)
.||+..+++|+..+.+++|+++ |+++|. ++.. +++++++++. ++.+.+.+.+.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~----~~~~~~~~~~-------~~~~~v~~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPLL----AALEALARAL-------GLGGRVTFLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chHH----HHHHHHHHHc-------CCCCeEEECCCCCHHHHH
Confidence 9999999999999998888654 887773 3332 3444444442 233456788899999999
Q ss_pred HHHHhcceeeeccc------cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCC
Q 003024 428 AYYTIAECVVVTAV------RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWN 498 (856)
Q Consensus 428 aly~~ADv~vvtS~------~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d 498 (856)
.+|+.||++++||. .||||++++|||+|+. |+|+|+.+|..+.+. .|++++|.|
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-----------------PvI~s~~~~~~e~i~~~~~g~~~~~~d 322 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-----------------PVVATRHGGIPEAVEDGETGLLVPEGD 322 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC-----------------CEEEeCCCCchhheecCCeeEEECCCC
Confidence 99999999999997 5999999999999954 999999999988772 489999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHHHH
Q 003024 499 IEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFF 541 (856)
Q Consensus 499 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 541 (856)
+++++++|.++++. ++.+.....+.++++ ..+++..+++.+.
T Consensus 323 ~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 323 VAALAAALGRLLAD-PDLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 99999999999974 445555566677777 4688888887664
No 64
>PLN02423 phosphomannomutase
Probab=99.84 E-value=1.8e-19 Score=191.12 Aligned_cols=211 Identities=18% Similarity=0.199 Sum_probs=138.0
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC-C-C-ccEEeeCCEEEEeCC
Q 003024 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC-K-K-LGIAAEHGYFMRWSA 666 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~-~-~-lgliaenG~~I~~~~ 666 (856)
+.+++++|+||||++ .++.+++++.++|++| ++. +.|+++|||+...+.+.++.. . . ..++++||+++...+
T Consensus 6 ~~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l-~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g 80 (245)
T PLN02423 6 PGVIALFDVDGTLTA---PRKEATPEMLEFMKEL-RKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDG 80 (245)
T ss_pred cceEEEEeccCCCcC---CCCcCCHHHHHHHHHH-HhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCC
Confidence 456777999999999 8889999999999998 555 999999999999998888653 1 1 368899999998655
Q ss_pred CcceEecCCC-CcccHHHHHHHHHHHHhh--------cCCcceEEecccceEEe--eecCCC-------C--CCchhHHH
Q 003024 667 DEEWQNCGQS-VDFGWIQIAEPVMKLYTE--------STDGSYIEIKESALVWH--HRDADP-------G--FGSSQAKE 726 (856)
Q Consensus 667 ~~~w~~~~~~-~~~~w~~~v~~i~~~~~~--------~~~Gs~ie~k~~~l~~~--~~~~dp-------~--~~~~~a~e 726 (856)
...+...... .+. +.+.++++...+ ...+.+++..+...... +.+... + .......+
T Consensus 81 ~~i~~~~l~~~l~~---~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 157 (245)
T PLN02423 81 KLIGTQSLKSFLGE---DKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPK 157 (245)
T ss_pred EEEEEecccccCCH---HHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHH
Confidence 4433322111 111 222222222111 12244454332221111 111100 0 00122344
Q ss_pred HHHHHHHHhcCCC-eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeC----CchhHHHHHHccccccC
Q 003024 727 LLDHLESVLANEP-AAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGD----DRSDEDMFEIIGNATSS 801 (856)
Q Consensus 727 l~~~L~~~l~~~~-~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~~~ 801 (856)
+.+.+.+.+.+.. ..+.+|..++||+|+|+|||.|++.|+ +++++++||| +.||++||+.-|.
T Consensus 158 ~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--------~~~e~~aFGD~~~~~~ND~eMl~~~~~---- 225 (245)
T PLN02423 158 MVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE--------DFDEIHFFGDKTYEGGNDHEIFESERT---- 225 (245)
T ss_pred HHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc--------CcCeEEEEeccCCCCCCcHHHHhCCCc----
Confidence 5555555554422 334455689999999999999999997 5799999999 8999999998664
Q ss_pred CCCCCCccEEEEEeCCCccccceEcCChhHHHHHHHHHH
Q 003024 802 GVLSSNASVFACTVGQKPSKAKYYLDDAAEVVTMLEALA 840 (856)
Q Consensus 802 ~~~~~~~~~~av~vG~~~s~A~y~l~~~~eV~~~L~~L~ 840 (856)
.+.+ +.+++++.++|+.+.
T Consensus 226 ---------~~~~-----------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 226 ---------IGHT-----------VTSPDDTREQCTALF 244 (245)
T ss_pred ---------ceEE-----------eCCHHHHHHHHHHhc
Confidence 2444 368899998888764
No 65
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.84 E-value=6.1e-19 Score=197.75 Aligned_cols=285 Identities=14% Similarity=0.155 Sum_probs=194.1
Q ss_pred HHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcC---CCeEEEEEccCCCChHHHhcCCch-HHHHHHhHhCCEEcc
Q 003024 187 KIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFT---RLRMGFFLHSPFPSSEIYRTLPVR-EEILKALLNADLIGF 262 (856)
Q Consensus 187 ~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~---~~~i~~flH~PfP~~e~~~~lp~r-~eil~~ll~~dligf 262 (856)
+.+.+.+ +..+| |+|++|.+....++.++.++.. +.++.+.+|-.-.. ....-+.. .-+...+-.+|.|..
T Consensus 74 ~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~ 148 (371)
T cd04962 74 SKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTA 148 (371)
T ss_pred HHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEE
Confidence 4444444 45566 8999998776556665544332 67888888843111 11111211 222334567899988
Q ss_pred cCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEE
Q 003024 263 HTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVL 339 (856)
Q Consensus 263 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~ii 339 (856)
.+......+...+ +..-++.++|+|+|...+... + . ...++++ .+++++
T Consensus 149 ~s~~~~~~~~~~~--------------------~~~~~i~vi~n~~~~~~~~~~---~--~---~~~~~~~~~~~~~~~i 200 (371)
T cd04962 149 VSESLRQETYELF--------------------DITKEIEVIPNFVDEDRFRPK---P--D---EALKRRLGAPEGEKVL 200 (371)
T ss_pred cCHHHHHHHHHhc--------------------CCcCCEEEecCCcCHhhcCCC---c--h---HHHHHhcCCCCCCeEE
Confidence 8877665554311 111246778999998766421 1 1 1223333 468899
Q ss_pred EeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcC
Q 003024 340 LGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDK 419 (856)
Q Consensus 340 l~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~ 419 (856)
++++|+.+.||+..+++|++++.++ +++ .|+.+|. +++..++++ ++.+. +..+.+.+.+
T Consensus 201 l~~g~l~~~K~~~~li~a~~~l~~~-~~~----~l~i~G~-----g~~~~~~~~----~~~~~-------~~~~~v~~~g 259 (371)
T cd04962 201 IHISNFRPVKRIDDVIRIFAKVRKE-VPA----RLLLVGD-----GPERSPAER----LAREL-------GLQDDVLFLG 259 (371)
T ss_pred EEecccccccCHHHHHHHHHHHHhc-CCc----eEEEEcC-----CcCHHHHHH----HHHHc-------CCCceEEEec
Confidence 9999999999999999999988665 333 4777764 333333433 33332 2233444555
Q ss_pred CCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCC
Q 003024 420 PVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNP 496 (856)
Q Consensus 420 ~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP 496 (856)
.. +++..+|+.||++|+||..||||++++|||+|+. |+|+|+.+|..+.+. .|++++|
T Consensus 260 ~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~-----------------PvI~s~~~~~~e~i~~~~~G~~~~~ 320 (371)
T cd04962 260 KQ--DHVEELLSIADLFLLPSEKESFGLAALEAMACGV-----------------PVVASNAGGIPEVVKHGETGFLVDV 320 (371)
T ss_pred Cc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCC-----------------CEEEeCCCCchhhhcCCCceEEcCC
Confidence 53 5799999999999999999999999999999955 999999999988883 4899999
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhh-hhcCCHHHHHHHHHHHHH
Q 003024 497 WNIEATAEAMHEAIQMNEAEKQLRHEKHYRY-VSTHDVAYWARSFFQDME 545 (856)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~ 545 (856)
.|++++|++|.++++. ++++....++.+++ ...+++...++++++-++
T Consensus 321 ~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 321 GDVEAMAEYALSLLED-DELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred CCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999974 45555556666766 566888888888876554
No 66
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.84 E-value=2.9e-19 Score=198.81 Aligned_cols=269 Identities=20% Similarity=0.220 Sum_probs=191.4
Q ss_pred HHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHH
Q 003024 194 IEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLS 273 (856)
Q Consensus 194 ~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~ 273 (856)
++..+| |+|++|..+...+..++.+ ..++|+.+.+|-.++....+ ..+ +..+|.+-+.+....+.+.+
T Consensus 74 ~~~~~~--dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~------~~~---~~~~~~vi~~s~~~~~~~~~ 141 (355)
T cd03819 74 IREEKV--DIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFRY------NAI---MARGDRVIAVSNFIADHIRE 141 (355)
T ss_pred HHHcCC--CEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHHH------HHH---HHhcCEEEEeCHHHHHHHHH
Confidence 345566 8999998776555554443 34799999999776644311 222 34688887766544443331
Q ss_pred HHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccCC
Q 003024 274 CCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKG 350 (856)
Q Consensus 274 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~KG 350 (856)
..+. ...++.++|+|||...|......+ .....+++++ +++++++++||+.+.||
T Consensus 142 ----~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg 199 (355)
T cd03819 142 ----NYGV---------------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKG 199 (355)
T ss_pred ----hcCC---------------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccC
Confidence 1221 123567789999998775432211 1122244544 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHH
Q 003024 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (856)
Q Consensus 351 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 430 (856)
+..+++|+..+.+++++++ |+.+|... ..+.+.+++.+.+.+.+ ..+.+.+.+. .+++..+|
T Consensus 200 ~~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~~~-------~~~~v~~~g~--~~~~~~~l 261 (355)
T cd03819 200 QEVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKRLG-------LQDRVTFVGH--CSDMPAAY 261 (355)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHHcC-------CcceEEEcCC--cccHHHHH
Confidence 9999999999988767654 88887532 22334445544444432 2234455555 67899999
Q ss_pred Hhcceeeecc-ccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHH
Q 003024 431 TIAECVVVTA-VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAM 506 (856)
Q Consensus 431 ~~ADv~vvtS-~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai 506 (856)
+.||++++|| ..||||++.+|||+|+. |+|+|..+|..+.+. .|++++|.|+++++++|
T Consensus 262 ~~ad~~i~ps~~~e~~~~~l~EA~a~G~-----------------PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i 324 (355)
T cd03819 262 ALADIVVSASTEPEAFGRTAVEAQAMGR-----------------PVIASDHGGARETVRPGETGLLVPPGDAEALAQAL 324 (355)
T ss_pred HhCCEEEecCCCCCCCchHHHHHHhcCC-----------------CEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHH
Confidence 9999999999 78999999999999955 999999988888773 48999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhhhhcC
Q 003024 507 HEAIQMNEAEKQLRHEKHYRYVSTH 531 (856)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~v~~~ 531 (856)
..++..+++++....++.++++.++
T Consensus 325 ~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 325 DQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 9888888888888888888877654
No 67
>PLN02949 transferase, transferring glycosyl groups
Probab=99.83 E-value=8.1e-19 Score=202.21 Aligned_cols=314 Identities=15% Similarity=0.155 Sum_probs=207.8
Q ss_pred cccccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccc-chHHHHHHhhcCCCeEEE
Q 003024 151 FCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHL-MVLPTFLRRRFTRLRMGF 229 (856)
Q Consensus 151 f~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl-~llp~~lr~~~~~~~i~~ 229 (856)
+-..-.||-||.+. ..-+..|-++..+.+ +.| .|||----. ..+| ++| +.+.||+|
T Consensus 109 ~~~~~~~~~~t~~~--------~~~~~~~l~~~~~~~---------~~p---~v~vDt~~~~~~~p-l~~--~~~~~v~~ 165 (463)
T PLN02949 109 WIEEETYPRFTMIG--------QSLGSVYLAWEALCK---------FTP---LYFFDTSGYAFTYP-LAR--LFGCKVVC 165 (463)
T ss_pred ccccccCCceehHH--------HHHHHHHHHHHHHHh---------cCC---CEEEeCCCcccHHH-HHH--hcCCcEEE
Confidence 34556688877663 223677777776654 133 477741110 1223 344 44799999
Q ss_pred EEccCCCChHHHhcCCch-------------------HHH-------HH--HhHhCCEEcccCHHHHHHHHHHHHhhhCc
Q 003024 230 FLHSPFPSSEIYRTLPVR-------------------EEI-------LK--ALLNADLIGFHTFDYARHFLSCCSRMLGL 281 (856)
Q Consensus 230 flH~PfP~~e~~~~lp~r-------------------~ei-------l~--~ll~~dligf~t~~~~~~Fl~~~~r~lg~ 281 (856)
.+|-|--+.+....+-.+ +.+ +. .+-.+|.|-..+....+++.+ ..
T Consensus 166 yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~----~~-- 239 (463)
T PLN02949 166 YTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEA----LW-- 239 (463)
T ss_pred EEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHH----Hc--
Confidence 999665455433222100 000 00 113456666655544444432 11
Q ss_pred eecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHH
Q 003024 282 EYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHL 361 (856)
Q Consensus 282 ~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~l 361 (856)
+...++.++++|+|...+... +. ....++.++++|+|+.+.||+..+|+||.++
T Consensus 240 --------------~~~~~i~vvyp~vd~~~~~~~---~~---------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l 293 (463)
T PLN02949 240 --------------RIPERIKRVYPPCDTSGLQAL---PL---------ERSEDPPYIISVAQFRPEKAHALQLEAFALA 293 (463)
T ss_pred --------------CCCCCeEEEcCCCCHHHcccC---Cc---------cccCCCCEEEEEEeeeccCCHHHHHHHHHHH
Confidence 111245677889997765311 10 0113457899999999999999999999999
Q ss_pred HHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccc
Q 003024 362 LKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAV 441 (856)
Q Consensus 362 l~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~ 441 (856)
+++.++-..++.|+++|... .++..++.+++++++++.+ ....+.|.+.++.+++.++|+.||+++.||.
T Consensus 294 ~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~l~-------L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~ 363 (463)
T PLN02949 294 LEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKELG-------LDGDVEFHKNVSYRDLVRLLGGAVAGLHSMI 363 (463)
T ss_pred HHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHHcC-------CCCcEEEeCCCCHHHHHHHHHhCcEEEeCCc
Confidence 87544221235588888642 1222334455666665532 3345667789999999999999999999999
Q ss_pred cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-C----C--ceeeCCCCHHHHHHHHHHHHcCCH
Q 003024 442 RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S----G--AIRVNPWNIEATAEAMHEAIQMNE 514 (856)
Q Consensus 442 ~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~----~--al~VnP~d~~~~A~ai~~aL~m~~ 514 (856)
.||||++++|||||+. |+|+|..+|..+.+ . + |++++ |++++|++|.+++++++
T Consensus 364 ~E~FGivvlEAMA~G~-----------------PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~ 424 (463)
T PLN02949 364 DEHFGISVVEYMAAGA-----------------VPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRE 424 (463)
T ss_pred cCCCChHHHHHHHcCC-----------------cEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCH
Confidence 9999999999999954 99999999975333 2 2 67764 99999999999999888
Q ss_pred HHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHH
Q 003024 515 AEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTC 548 (856)
Q Consensus 515 ~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 548 (856)
+++++..++.++.+.+++....++++.+.+....
T Consensus 425 ~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 425 TERLEIAAAARKRANRFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 8887777888888889999998888888777643
No 68
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.83 E-value=2.7e-19 Score=199.22 Aligned_cols=261 Identities=15% Similarity=0.101 Sum_probs=176.8
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHH-HHhHhCCEEcccCHHHHHHH
Q 003024 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEIL-KALLNADLIGFHTFDYARHF 271 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil-~~ll~~dligf~t~~~~~~F 271 (856)
+++..+| |+|++|..+...++.++.++.....+.+..|..+...+.+........+. ..+..+|.+-..+....+.+
T Consensus 75 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~ 152 (358)
T cd03812 75 LIKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWL 152 (358)
T ss_pred HHhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHH
Confidence 3445566 99999999877777777666555566777887765544332211110011 11223566555554333333
Q ss_pred HHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc--CCCeEEEeccCccccC
Q 003024 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTVLLGVDDMDIFK 349 (856)
Q Consensus 272 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~k~iil~VdRld~~K 349 (856)
... ....++.++|+|+|...+... +..... .++.. .++.+|+++||+++.|
T Consensus 153 ~~~---------------------~~~~~~~vi~ngvd~~~~~~~---~~~~~~---~~~~~~~~~~~~i~~vGr~~~~K 205 (358)
T cd03812 153 FGK---------------------VKNKKFKVIPNGIDLEKFIFN---EEIRKK---RRELGILEDKFVIGHVGRFSEQK 205 (358)
T ss_pred HhC---------------------CCcccEEEEeccCcHHHcCCC---chhhhH---HHHcCCCCCCEEEEEEecccccc
Confidence 220 112356789999999877432 111111 11211 5678999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHH
Q 003024 350 GVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAY 429 (856)
Q Consensus 350 Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~al 429 (856)
|+..+++|+..+.+++|+++ |+.+|. |+..+.+++.++ +. +..+.+.+.+. .+++..+
T Consensus 206 g~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~~~~~~~----~~-------~~~~~v~~~g~--~~~~~~~ 263 (358)
T cd03812 206 NHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEEIKKKVK----EL-------GLEDKVIFLGV--RNDVPEL 263 (358)
T ss_pred ChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHHHHHHH----hc-------CCCCcEEEecc--cCCHHHH
Confidence 99999999999999998765 777773 344344444333 21 33344556665 6789999
Q ss_pred HHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccCC--ceeeCCCCHHHHHHHHH
Q 003024 430 YTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSG--AIRVNPWNIEATAEAMH 507 (856)
Q Consensus 430 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~--al~VnP~d~~~~A~ai~ 507 (856)
|+.||++|+||..||||++++|||+|+. |+|+|+.+|..+.+.+ +++..+.+++++|++|.
T Consensus 264 ~~~adi~v~ps~~E~~~~~~lEAma~G~-----------------PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~ 326 (358)
T cd03812 264 LQAMDVFLFPSLYEGLPLVLIEAQASGL-----------------PCILSDTITKEVDLTDLVKFLSLDESPEIWAEEIL 326 (358)
T ss_pred HHhcCEEEecccccCCCHHHHHHHHhCC-----------------CEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHH
Confidence 9999999999999999999999999954 9999999999888843 55555667899999999
Q ss_pred HHHcCCHHHHHHHH
Q 003024 508 EAIQMNEAEKQLRH 521 (856)
Q Consensus 508 ~aL~m~~~er~~r~ 521 (856)
++++.++.++..+.
T Consensus 327 ~l~~~~~~~~~~~~ 340 (358)
T cd03812 327 KLKSEDRRERSSES 340 (358)
T ss_pred HHHhCcchhhhhhh
Confidence 99998776554433
No 69
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.83 E-value=2.6e-19 Score=198.62 Aligned_cols=275 Identities=20% Similarity=0.181 Sum_probs=199.8
Q ss_pred cCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChH--HHh---cCCchHHHHHHhHhCCEEcccCHHHHHHH
Q 003024 197 INPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSE--IYR---TLPVREEILKALLNADLIGFHTFDYARHF 271 (856)
Q Consensus 197 ~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e--~~~---~lp~r~eil~~ll~~dligf~t~~~~~~F 271 (856)
.++ |+||+|.+..... +..+.++.+.+|..+|... .+. ....+.-+...+..+|.+.+.+...++.+
T Consensus 84 ~~~--Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~ 155 (365)
T cd03809 84 LGL--DLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDL 155 (365)
T ss_pred cCC--CeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHH
Confidence 455 9999998887765 5568999999997665321 111 11223344556677899888887666665
Q ss_pred HHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCH
Q 003024 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGV 351 (856)
Q Consensus 272 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi 351 (856)
.+.. +. ...++.++|+|+|...+... + . .. ........++++|+++||+.+.||+
T Consensus 156 ~~~~----~~---------------~~~~~~vi~~~~~~~~~~~~---~-~-~~-~~~~~~~~~~~~i~~~G~~~~~K~~ 210 (365)
T cd03809 156 LRYL----GV---------------PPDKIVVIPLGVDPRFRPPP---A-E-AE-VLRALYLLPRPYFLYVGTIEPRKNL 210 (365)
T ss_pred HHHh----Cc---------------CHHHEEeeccccCccccCCC---c-h-HH-HHHHhcCCCCCeEEEeCCCccccCH
Confidence 5421 11 12345678999998766421 1 1 11 1112223578899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHH
Q 003024 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (856)
Q Consensus 352 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 431 (856)
..+++|+..+.+++|++ .|+.+|... .........+ .+ .+..+.+.+.+.++.+++..+|+
T Consensus 211 ~~~l~~~~~~~~~~~~~----~l~i~G~~~----~~~~~~~~~~----~~-------~~~~~~v~~~g~~~~~~~~~~~~ 271 (365)
T cd03809 211 ERLLEAFARLPAKGPDP----KLVIVGKRG----WLNEELLARL----RE-------LGLGDRVRFLGYVSDEELAALYR 271 (365)
T ss_pred HHHHHHHHHHHHhcCCC----CEEEecCCc----cccHHHHHHH----HH-------cCCCCeEEECCCCChhHHHHHHh
Confidence 99999999999988754 477777432 1112222222 11 13345677889999999999999
Q ss_pred hcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-CCceeeCCCCHHHHHHHHHHHH
Q 003024 432 IAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAI 510 (856)
Q Consensus 432 ~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL 510 (856)
.||++++||..||+|++++|||+|+. |+|+|+.+|..+.+ .+++.++|.|+++++++|.+++
T Consensus 272 ~~d~~l~ps~~e~~~~~~~Ea~a~G~-----------------pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~ 334 (365)
T cd03809 272 GARAFVFPSLYEGFGLPVLEAMACGT-----------------PVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLL 334 (365)
T ss_pred hhhhhcccchhccCCCCHHHHhcCCC-----------------cEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHh
Confidence 99999999999999999999999955 99999998888877 4689999999999999999998
Q ss_pred cCCHHHHHHHHHHHhhhhhcCCHHHHHHHHH
Q 003024 511 QMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541 (856)
Q Consensus 511 ~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 541 (856)
+ +++.+....++.++++..+++..++++++
T Consensus 335 ~-~~~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 335 E-DPALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred c-CHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 6 45666666666778888999999998775
No 70
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.83 E-value=7.9e-19 Score=198.75 Aligned_cols=280 Identities=16% Similarity=0.147 Sum_probs=184.1
Q ss_pred CCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHH---------HhHhCCEEcccCHHHHHHH
Q 003024 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILK---------ALLNADLIGFHTFDYARHF 271 (856)
Q Consensus 201 ~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~---------~ll~~dligf~t~~~~~~F 271 (856)
.|+|.+|+.... ++ +++. ..+.++.|.+| ||......--.+...+.+ .+-.+|.|-..+......+
T Consensus 95 ~Dvi~~~~~~~~-~~-~~~~-~~~~~~i~~~h--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~ 169 (392)
T cd03805 95 YDVFIVDQVSAC-VP-LLKL-FSPSKILFYCH--FPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVF 169 (392)
T ss_pred CCEEEEcCcchH-HH-HHHH-hcCCcEEEEEe--cChHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHH
Confidence 499999886643 22 2332 22389999999 443321110011111111 1334677666554333333
Q ss_pred HHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCH
Q 003024 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGV 351 (856)
Q Consensus 272 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi 351 (856)
.. .++. .....+.++|+|||.+.|.+....+ ..+.....+++.+++++||+.+.||+
T Consensus 170 ~~----~~~~--------------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~ 226 (392)
T cd03805 170 KK----TFPS--------------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNI 226 (392)
T ss_pred HH----Hhcc--------------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCCh
Confidence 22 1110 0111234789999998775321110 11111122567899999999999999
Q ss_pred HHHHHHHHHHHHhC---CCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHH-HhcccCCCCcccEEEEcCCCCHHHHH
Q 003024 352 DLKLLAMEHLLKQH---PKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKR-INETFGRPGYEPVVFIDKPVTLSERA 427 (856)
Q Consensus 352 ~~~l~A~~~ll~~~---p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~-IN~~~~~~~~~pvv~~~~~v~~~el~ 427 (856)
..+++|++++.+++ |+ +.|+.+|.... ..++..++.+++++++++ . +....+.|.|.++.+++.
T Consensus 227 ~~ll~a~~~l~~~~~~~~~----~~l~i~G~~~~-~~~~~~~~~~~l~~~~~~~~-------~l~~~V~f~g~~~~~~~~ 294 (392)
T cd03805 227 ALAIEAFAILKDKLAEFKN----VRLVIAGGYDP-RVAENVEYLEELQRLAEELL-------LLEDQVIFLPSISDSQKE 294 (392)
T ss_pred HHHHHHHHHHHhhcccccC----eEEEEEcCCCC-CCchhHHHHHHHHHHHHHhc-------CCCceEEEeCCCChHHHH
Confidence 99999999998887 55 44888885431 112223445566666554 2 233456677899999999
Q ss_pred HHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHH
Q 003024 428 AYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAE 504 (856)
Q Consensus 428 aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ 504 (856)
.+|+.||++++||..||||++++|||+|+. |+|+|+.+|..+.+. .|++++| |++++|+
T Consensus 295 ~~l~~ad~~l~~s~~E~~g~~~lEAma~G~-----------------PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~ 356 (392)
T cd03805 295 LLLSSARALLYTPSNEHFGIVPLEAMYAGK-----------------PVIACNSGGPLETVVDGETGFLCEP-TPEEFAE 356 (392)
T ss_pred HHHhhCeEEEECCCcCCCCchHHHHHHcCC-----------------CEEEECCCCcHHHhccCCceEEeCC-CHHHHHH
Confidence 999999999999999999999999999954 999999999888773 3788877 9999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHH
Q 003024 505 AMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARS 539 (856)
Q Consensus 505 ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~ 539 (856)
+|..+++.++ +++...++.++++ ..+++..++++
T Consensus 357 ~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 357 AMLKLANDPD-LADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHhChH-HHHHHHHHHHHHHHHhcCHHHHhhh
Confidence 9999998654 4555566667766 45777776654
No 71
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.82 E-value=4.4e-19 Score=211.39 Aligned_cols=281 Identities=14% Similarity=0.112 Sum_probs=182.4
Q ss_pred HHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEE-EEccCCC---ChHHHhcCCchHHHHHHhHhCCEEccc--CHHH
Q 003024 194 IEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGF-FLHSPFP---SSEIYRTLPVREEILKALLNADLIGFH--TFDY 267 (856)
Q Consensus 194 ~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~-flH~PfP---~~e~~~~lp~r~eil~~ll~~dligf~--t~~~ 267 (856)
++..+| |+|++|.+.-.++..+..+. .++|+.+ .+|. +| .++.|+. ....+.+.+..++.+.+- +...
T Consensus 396 lk~~kp--DIVH~h~~~a~~lg~lAa~~-~gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~ 469 (694)
T PRK15179 396 MRSSVP--SVVHIWQDGSIFACALAALL-AGVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFA 469 (694)
T ss_pred HHHcCC--cEEEEeCCcHHHHHHHHHHH-cCCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHH
Confidence 344466 99999999877766666543 3566554 4464 22 2222210 011122333333433222 2222
Q ss_pred HHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc-CCCeEEEeccCcc
Q 003024 268 ARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMD 346 (856)
Q Consensus 268 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~k~iil~VdRld 346 (856)
.+.+.. .+| ....+|.++|+|||...|.+ .+........++... .+.++|++|+|++
T Consensus 470 ~~~l~~----~~g---------------~~~~kI~VI~NGVd~~~f~~---~~~~~~~~~~~~~~~~~~~~vIg~VGRL~ 527 (694)
T PRK15179 470 AHRYAD----WLG---------------VDERRIPVVYNGLAPLKSVQ---DDACTAMMAQFDARTSDARFTVGTVMRVD 527 (694)
T ss_pred HHHHHH----HcC---------------CChhHEEEECCCcCHHhcCC---CchhhHHHHhhccccCCCCeEEEEEEeCC
Confidence 222222 111 12346778999999887742 121111122222222 3467899999999
Q ss_pred ccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHH
Q 003024 347 IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSER 426 (856)
Q Consensus 347 ~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el 426 (856)
+.||+..+++|+.++++++|+++ |+++|. |+.. +++++++++. +....+.|.|.. .++
T Consensus 528 ~~KG~~~LI~A~a~l~~~~p~~~----LvIvG~-----G~~~----~~L~~l~~~l-------gL~~~V~flG~~--~dv 585 (694)
T PRK15179 528 DNKRPFLWVEAAQRFAASHPKVR----FIMVGG-----GPLL----ESVREFAQRL-------GMGERILFTGLS--RRV 585 (694)
T ss_pred ccCCHHHHHHHHHHHHHHCcCeE----EEEEcc-----Ccch----HHHHHHHHHc-------CCCCcEEEcCCc--chH
Confidence 99999999999999999999765 888874 3333 3444455443 344567777775 479
Q ss_pred HHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCH--HH
Q 003024 427 AAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNI--EA 501 (856)
Q Consensus 427 ~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~--~~ 501 (856)
..+|+.||+||+||.+|||+++++|||+|+. |+|+|..+|+.+.+. +|++|+|.|. ++
T Consensus 586 ~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~-----------------PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~ 648 (694)
T PRK15179 586 GYWLTQFNAFLLLSRFEGLPNVLIEAQFSGV-----------------PVVTTLAGGAGEAVQEGVTGLTLPADTVTAPD 648 (694)
T ss_pred HHHHHhcCEEEeccccccchHHHHHHHHcCC-----------------eEEEECCCChHHHccCCCCEEEeCCCCCChHH
Confidence 9999999999999999999999999999955 999999999998883 3899998885 68
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHHHHH
Q 003024 502 TAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQ 542 (856)
Q Consensus 502 ~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~ 542 (856)
++++|.+++........ ..++.++++ ..+++...++++++
T Consensus 649 La~aL~~ll~~l~~~~~-l~~~ar~~a~~~FS~~~~~~~~~~ 689 (694)
T PRK15179 649 VAEALARIHDMCAADPG-IARKAADWASARFSLNQMIASTVR 689 (694)
T ss_pred HHHHHHHHHhChhccHH-HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999988865432222 234556666 46788777776654
No 72
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.82 E-value=1.1e-18 Score=199.44 Aligned_cols=293 Identities=10% Similarity=0.040 Sum_probs=186.2
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeE-EEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHH
Q 003024 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRM-GFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHF 271 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i-~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~F 271 (856)
++...+| |+|+.|++.-.++..+..... .+++ ....|. ++....-+.+-... +.+..++++--.+. +..+.
T Consensus 275 ~ir~~rp--DIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~~~r~~~~e~---~~~~~a~~i~~~sd-~v~~s 346 (578)
T PRK15490 275 HLCERKL--DYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVVRKRLFKPEY---EPLYQALAVVPGVD-FMSNN 346 (578)
T ss_pred HHHHcCC--CEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcchhhHHHHHH---HHhhhhceeEecch-hhhcc
Confidence 4455577 899999999766655554433 4555 344565 33221111110000 12334454432222 33222
Q ss_pred HHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc-CCCeEEEeccCccccCC
Q 003024 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMDIFKG 350 (856)
Q Consensus 272 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~k~iil~VdRld~~KG 350 (856)
....+.+.. .+.-...+|.++|+|||...|.+....+ ......++..+ .+..+|++|+|+.+.||
T Consensus 347 ~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg 412 (578)
T PRK15490 347 HCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKN 412 (578)
T ss_pred HHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcC
Confidence 221121110 0011234678899999998876432111 11122222223 34568999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHH
Q 003024 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (856)
Q Consensus 351 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 430 (856)
....++|+.++++++|+++ |+++| +|+..+ ++++++++. +..+.+.|.|. .+++..+|
T Consensus 413 ~~~LI~A~a~llk~~pdir----LvIVG-----dG~~~e----eLk~la~el-------gL~d~V~FlG~--~~Dv~~~L 470 (578)
T PRK15490 413 PFAWIDFAARYLQHHPATR----FVLVG-----DGDLRA----EAQKRAEQL-------GILERILFVGA--SRDVGYWL 470 (578)
T ss_pred HHHHHHHHHHHHhHCCCeE----EEEEe-----CchhHH----HHHHHHHHc-------CCCCcEEECCC--hhhHHHHH
Confidence 9999999999999998765 88777 344433 444444443 33345566665 57899999
Q ss_pred HhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHH
Q 003024 431 TIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMH 507 (856)
Q Consensus 431 ~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~ 507 (856)
+.||+||+||.+|||+++++|||+|+. |+|+|..+|+.+.+. +|++|+|.|++++++++.
T Consensus 471 aaADVfVlPS~~EGfp~vlLEAMA~Gl-----------------PVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~ 533 (578)
T PRK15490 471 QKMNVFILFSRYEGLPNVLIEAQMVGV-----------------PVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACR 533 (578)
T ss_pred HhCCEEEEcccccCccHHHHHHHHhCC-----------------CEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHH
Confidence 999999999999999999999999955 999999999998883 489999999999999885
Q ss_pred HHHcCCH--HHHHHHHHHHhhhhh-cCCHHHHHHHHHHHHHH
Q 003024 508 EAIQMNE--AEKQLRHEKHYRYVS-THDVAYWARSFFQDMER 546 (856)
Q Consensus 508 ~aL~m~~--~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 546 (856)
.+..+.. ..+....++.++++. .+++...++.+++-+..
T Consensus 534 lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 534 YAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 4333221 223334456677774 58988888888776553
No 73
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.81 E-value=4.5e-18 Score=194.55 Aligned_cols=282 Identities=16% Similarity=0.151 Sum_probs=192.6
Q ss_pred CEEEEeCcccchH-HHHHHhhcCCCeEEEEEccCCCChHHHhc-C--CchH----HHHH-HhHhCCEEcccCHHHHHHHH
Q 003024 202 DYVWIHDYHLMVL-PTFLRRRFTRLRMGFFLHSPFPSSEIYRT-L--PVRE----EILK-ALLNADLIGFHTFDYARHFL 272 (856)
Q Consensus 202 D~VwihDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~~~~-l--p~r~----eil~-~ll~~dligf~t~~~~~~Fl 272 (856)
|+|++|...+... ..++-++..++++.+.+|--||..-.-.. . +... .+.+ .+-.+|.|...+....+.+.
T Consensus 108 Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~ 187 (412)
T PRK10307 108 DRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAR 187 (412)
T ss_pred CEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHH
Confidence 9999998665432 33333444567888888866653311110 1 0000 1111 23357888777776665543
Q ss_pred HHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccC
Q 003024 273 SCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFK 349 (856)
Q Consensus 273 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~K 349 (856)
+ .+ ....++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+.|
T Consensus 188 ~-----~~---------------~~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 188 E-----KG---------------VAAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred H-----cC---------------CCcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 2 11 12235778999999988753211 1122355555 3568999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHH
Q 003024 350 GVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAY 429 (856)
Q Consensus 350 Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~al 429 (856)
|+..+++|++++ +++|+ +.|+++| +|+..++ +++++++. +... +.|.|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG-----~g~~~~~----l~~~~~~~-------~l~~-v~f~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICG-----QGGGKAR----LEKMAQCR-------GLPN-VHFLPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEEC-----CChhHHH----HHHHHHHc-------CCCc-eEEeCCCCHHHHHHH
Confidence 999999999876 44565 4488776 3444333 44444432 2333 456678999999999
Q ss_pred HHhcceeeeccccccCCCc----ccceeeeecCCCCCCCCCCCCCCCCceEEecCCccc--cccc-CCceeeCCCCHHHH
Q 003024 430 YTIAECVVVTAVRDGMNLT----PYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC--SPSL-SGAIRVNPWNIEAT 502 (856)
Q Consensus 430 y~~ADv~vvtS~~EG~nLv----~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~l-~~al~VnP~d~~~~ 502 (856)
|+.||++|+||..|+++++ .+|||+|+. |+|+|..+|. .+.+ ..|++++|.|++++
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~-----------------PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~l 363 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLASGR-----------------NVVATAEPGTELGQLVEGIGVCVEPESVEAL 363 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHcCC-----------------CEEEEeCCCchHHHHHhCCcEEeCCCCHHHH
Confidence 9999999999999996554 589999955 9999998774 3444 56999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhhhh-cCCHHHHHHHHHHHHHHHH
Q 003024 503 AEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQDMERTC 548 (856)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~~~ 548 (856)
|++|.+++++ ++++....++.++++. .+++...+++|++.+++..
T Consensus 364 a~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 364 VAAIAALARQ-ALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHhC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 9999999875 4556666777788776 5899999999988887653
No 74
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.81 E-value=2.7e-18 Score=188.51 Aligned_cols=286 Identities=21% Similarity=0.154 Sum_probs=201.5
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHh----cCCchHHHHHHhHhCCEEcccCHHHH
Q 003024 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYR----TLPVREEILKALLNADLIGFHTFDYA 268 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~----~lp~r~eil~~ll~~dligf~t~~~~ 268 (856)
+++..++ |+|++|+++...+.. +..+.++.++.+.+|.+++...... ...........+..+|.+-+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 4444466 999999999887776 4455678999999999887643211 00111222233456788887777666
Q ss_pred HHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCcccc
Q 003024 269 RHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIF 348 (856)
Q Consensus 269 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~ 348 (856)
+.+.+. +.....++.++|+|+|...+.... ...........+++.++++||+++.
T Consensus 157 ~~~~~~-------------------~~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~g~~~~~ 211 (374)
T cd03801 157 EELREL-------------------GGVPPEKITVIPNGVDTERFRPAP------RAARRRLGIPEDEPVILFVGRLVPR 211 (374)
T ss_pred HHHHhc-------------------CCCCCCcEEEecCcccccccCccc------hHHHhhcCCcCCCeEEEEecchhhh
Confidence 555431 001113567789999987764211 0011111112457889999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHH
Q 003024 349 KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAA 428 (856)
Q Consensus 349 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~a 428 (856)
||+..+++|+..+.+++|++ .|+.+|. ++....+++.+ .+. +..+.+.+.+.++.+|+..
T Consensus 212 k~~~~~i~~~~~~~~~~~~~----~l~i~G~-----~~~~~~~~~~~----~~~-------~~~~~v~~~g~~~~~~~~~ 271 (374)
T cd03801 212 KGVDLLLEALAKLRKEYPDV----RLVIVGD-----GPLREELEALA----AEL-------GLGDRVTFLGFVPDEDLPA 271 (374)
T ss_pred cCHHHHHHHHHHHhhhcCCe----EEEEEeC-----cHHHHHHHHHH----HHh-------CCCcceEEEeccChhhHHH
Confidence 99999999999998888764 4777772 33333343333 221 2334566778999999999
Q ss_pred HHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHH
Q 003024 429 YYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEA 505 (856)
Q Consensus 429 ly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~a 505 (856)
+|+.||++++|+..||++++++|||+|+. |+|++..+|..+.+. .|+.+++.|+++++++
T Consensus 272 ~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-----------------pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 334 (374)
T cd03801 272 LYAAADVFVLPSLYEGFGLVLLEAMAAGL-----------------PVVASDVGGIPEVVEDGETGLLVPPGDPEALAEA 334 (374)
T ss_pred HHHhcCEEEecchhccccchHHHHHHcCC-----------------cEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHH
Confidence 99999999999999999999999999954 999999999888884 4899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHh-hhhhcCCHHHHHHHHHHHH
Q 003024 506 MHEAIQMNEAEKQLRHEKHY-RYVSTHDVAYWARSFFQDM 544 (856)
Q Consensus 506 i~~aL~m~~~er~~r~~~~~-~~v~~~~~~~W~~~~l~~l 544 (856)
|.++++.+.. +....++.+ ...+.+++..+++.+.+-+
T Consensus 335 i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 335 ILRLLDDPEL-RRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHcChHH-HHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 9999986544 334444444 5567789999998877643
No 75
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.81 E-value=3.4e-18 Score=195.27 Aligned_cols=272 Identities=15% Similarity=0.105 Sum_probs=189.9
Q ss_pred CCCCCEEEEeCcccchH-HHHHHhhcCCCeEEEEEccCC--CChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHH
Q 003024 198 NPEDDYVWIHDYHLMVL-PTFLRRRFTRLRMGFFLHSPF--PSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSC 274 (856)
Q Consensus 198 ~~~~D~VwihDyhl~ll-p~~lr~~~~~~~i~~flH~Pf--P~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~ 274 (856)
+++.|+++.|-+|-... -.+++++....++....|-.- +.......++.++.+ +-.+|.|.+.+....+.+.+.
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~~ 201 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQKR 201 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHHH
Confidence 44457777766554433 345667666667888899421 111111112222322 346899988887665544331
Q ss_pred HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHH
Q 003024 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (856)
Q Consensus 275 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~ 354 (856)
.+ ....++.++|+|++...+... ....++..|+++||+.+.||+..+
T Consensus 202 ----~~---------------~~~~ki~vi~~gv~~~~~~~~--------------~~~~~~~~il~~Grl~~~Kg~~~l 248 (407)
T cd04946 202 ----YP---------------AYKEKIKVSYLGVSDPGIISK--------------PSKDDTLRIVSCSYLVPVKRVDLI 248 (407)
T ss_pred ----CC---------------CccccEEEEECCcccccccCC--------------CCCCCCEEEEEeeccccccCHHHH
Confidence 11 122355778999997655311 011456789999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh--
Q 003024 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI-- 432 (856)
Q Consensus 355 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~-- 432 (856)
++|+.++.+++|+.. +.++.+|. |++.++++ +++++. +..+.+.+.|.++.+|+.++|+.
T Consensus 249 i~a~~~l~~~~p~~~--l~~~iiG~-----g~~~~~l~----~~~~~~-------~~~~~V~f~G~v~~~e~~~~~~~~~ 310 (407)
T cd04946 249 IKALAALAKARPSIK--IKWTHIGG-----GPLEDTLK----ELAESK-------PENISVNFTGELSNSEVYKLYKENP 310 (407)
T ss_pred HHHHHHHHHhCCCce--EEEEEEeC-----chHHHHHH----HHHHhc-------CCCceEEEecCCChHHHHHHHhhcC
Confidence 999999999998764 66776763 34433443 333321 22345668899999999999986
Q ss_pred cceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccCC---ceeeCC-CCHHHHHHHHHH
Q 003024 433 AECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSG---AIRVNP-WNIEATAEAMHE 508 (856)
Q Consensus 433 ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---al~VnP-~d~~~~A~ai~~ 508 (856)
||+|+.||..|||+++++|||+|+. |+|+|..+|..+.+.+ |++++| .|++++|++|.+
T Consensus 311 ~~v~v~~S~~Eg~p~~llEAma~G~-----------------PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ 373 (407)
T cd04946 311 VDVFVNLSESEGLPVSIMEAMSFGI-----------------PVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSK 373 (407)
T ss_pred CCEEEeCCccccccHHHHHHHHcCC-----------------CEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHH
Confidence 7889999999999999999999955 9999999999988843 688876 489999999999
Q ss_pred HHcCCHHHHHHHHHHHhhhhh-cCCHHHHHHHHH
Q 003024 509 AIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFF 541 (856)
Q Consensus 509 aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l 541 (856)
+++ +++++....++.++++. .+++..+.++|+
T Consensus 374 ll~-~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 374 FID-NEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHh-CHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 998 55666666777777774 578888877765
No 76
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.81 E-value=3.1e-18 Score=190.16 Aligned_cols=268 Identities=17% Similarity=0.156 Sum_probs=191.3
Q ss_pred HHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHH
Q 003024 195 EVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSC 274 (856)
Q Consensus 195 ~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~ 274 (856)
+..++ |+|++|..+...+..++..+....++.+.+|.+-..... ....+.+.+-.+|.+-..+....+.+.+.
T Consensus 76 ~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~vi~~s~~~~~~l~~~ 148 (355)
T cd03799 76 RRLGI--DHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSP-----DAIDLDEKLARADFVVAISEYNRQQLIRL 148 (355)
T ss_pred HhcCC--CEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccC-----chHHHHHHHhhCCEEEECCHHHHHHHHHh
Confidence 34455 999999876666666666666678999999854221111 11233444557999988888766665541
Q ss_pred HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHH
Q 003024 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (856)
Q Consensus 275 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~ 354 (856)
.+ ....++.++|+|+|...+.... .....++..|+++||+.+.||+..+
T Consensus 149 ----~~---------------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l 197 (355)
T cd03799 149 ----LG---------------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYL 197 (355)
T ss_pred ----cC---------------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHH
Confidence 01 1224577899999988764211 1122456789999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 003024 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAE 434 (856)
Q Consensus 355 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 434 (856)
++|++++.+++|++ .|+.+|. ++...++ .+.+.+. +..+.+.+.+.++.+|+.++|+.||
T Consensus 198 ~~~~~~l~~~~~~~----~l~i~G~-----~~~~~~~----~~~~~~~-------~~~~~v~~~g~~~~~~l~~~~~~ad 257 (355)
T cd03799 198 LEALALLKDRGIDF----RLDIVGD-----GPLRDEL----EALIAEL-------GLEDRVTLLGAKSQEEVRELLRAAD 257 (355)
T ss_pred HHHHHHHhhcCCCe----EEEEEEC-----CccHHHH----HHHHHHc-------CCCCeEEECCcCChHHHHHHHHhCC
Confidence 99999998876654 4777774 2232333 3333332 3345677889999999999999999
Q ss_pred eeeecccc------ccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHH
Q 003024 435 CVVVTAVR------DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEA 505 (856)
Q Consensus 435 v~vvtS~~------EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~a 505 (856)
++++||.. ||||++.+|||+|+. |+|+|+.+|..+.+. .|++++|.|+++++++
T Consensus 258 i~l~~s~~~~~~~~e~~~~~~~Ea~a~G~-----------------Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~ 320 (355)
T cd03799 258 LFVLPSVTAADGDREGLPVVLMEAMAMGL-----------------PVISTDVSGIPELVEDGETGLLVPPGDPEALADA 320 (355)
T ss_pred EEEecceecCCCCccCccHHHHHHHHcCC-----------------CEEecCCCCcchhhhCCCceEEeCCCCHHHHHHH
Confidence 99999999 999999999999955 999999988777773 4899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhhhhh-cCCHHHHHH
Q 003024 506 MHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWAR 538 (856)
Q Consensus 506 i~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~ 538 (856)
|.++++.+.. +....+..++++. .+++...++
T Consensus 321 i~~~~~~~~~-~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 321 IERLLDDPEL-RREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred HHHHHhCHHH-HHHHHHHHHHHHHHhcCHHHHhh
Confidence 9999986543 4445555666664 466665544
No 77
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.81 E-value=3.5e-18 Score=198.77 Aligned_cols=272 Identities=14% Similarity=0.086 Sum_probs=181.0
Q ss_pred CCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChH-HHh----cCCchHHHHHHhHhCCEEcccCHHHHHHHHHH
Q 003024 200 EDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSE-IYR----TLPVREEILKALLNADLIGFHTFDYARHFLSC 274 (856)
Q Consensus 200 ~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e-~~~----~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~ 274 (856)
+.|+|.++--.... +.++ +..+.+++..++|.-.=+.. .-. .-+.-+..++.+-.+|.|-..|....+.....
T Consensus 211 ~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~~~ 288 (500)
T TIGR02918 211 KKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILKNQ 288 (500)
T ss_pred CCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHHHH
Confidence 34888886555433 3444 56678999999995431100 000 00111222333344677766665433333221
Q ss_pred HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHH
Q 003024 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (856)
Q Consensus 275 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~ 354 (856)
... +.+...+|.++|+|++...+. +. ....+..|++|||+.+.||+..+
T Consensus 289 ~~~----------------~~~~~~ki~viP~g~~~~~~~-----~~----------~~r~~~~il~vGrl~~~Kg~~~l 337 (500)
T TIGR02918 289 FKK----------------YYNIEPRIYTIPVGSLDELQY-----PE----------QERKPFSIITASRLAKEKHIDWL 337 (500)
T ss_pred hhh----------------hcCCCCcEEEEcCCCcccccC-----cc----------cccCCeEEEEEeccccccCHHHH
Confidence 111 112234567889998754321 10 01234689999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 003024 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAE 434 (856)
Q Consensus 355 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 434 (856)
++|+.++.+++|+++ |+++|. |++. +++++++++.+ ....+.+.|.. ++..+|+.||
T Consensus 338 i~A~~~l~~~~p~~~----l~i~G~-----G~~~----~~l~~~i~~~~-------l~~~V~f~G~~---~~~~~~~~ad 394 (500)
T TIGR02918 338 VKAVVKAKKSVPELT----FDIYGE-----GGEK----QKLQKIINENQ-------AQDYIHLKGHR---NLSEVYKDYE 394 (500)
T ss_pred HHHHHHHHhhCCCeE----EEEEEC-----chhH----HHHHHHHHHcC-------CCCeEEEcCCC---CHHHHHHhCC
Confidence 999999999999765 777763 4443 34555554432 23355667754 5778999999
Q ss_pred eeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCc-ccccccC---CceeeCC----CC----HHHH
Q 003024 435 CVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFI-GCSPSLS---GAIRVNP----WN----IEAT 502 (856)
Q Consensus 435 v~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~al~VnP----~d----~~~~ 502 (856)
++|+||.+||||++++|||||+. |+|+|... |..+.+. +|++|++ .| ++++
T Consensus 395 v~v~pS~~Egfgl~~lEAma~G~-----------------PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~l 457 (500)
T TIGR02918 395 LYLSASTSEGFGLTLMEAVGSGL-----------------GMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITAL 457 (500)
T ss_pred EEEEcCccccccHHHHHHHHhCC-----------------CEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHH
Confidence 99999999999999999999954 99999986 6777773 4899974 34 8999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHH
Q 003024 503 AEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMER 546 (856)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 546 (856)
|++|.++|+ +.+++...++.++....+++..-++++.+-+++
T Consensus 458 a~~I~~ll~--~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 458 AEKIVEYFN--SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVRE 499 (500)
T ss_pred HHHHHHHhC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999994 445666677788888888888888877765543
No 78
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.81 E-value=2.1e-18 Score=191.42 Aligned_cols=283 Identities=19% Similarity=0.183 Sum_probs=190.3
Q ss_pred HHHcCCCCCEEEEeCcc-cc---hHHHHH-HhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHH
Q 003024 194 IEVINPEDDYVWIHDYH-LM---VLPTFL-RRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYA 268 (856)
Q Consensus 194 ~~~~~~~~D~VwihDyh-l~---llp~~l-r~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~ 268 (856)
+...+| |+|++|+.+ ++ ...... ..+..+.++.+.+|.+.|....+.. ..-.-..+-.+|.|-+.+.+.+
T Consensus 72 ~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~---~~~~~~~~~~~d~ii~~s~~~~ 146 (366)
T cd03822 72 IRLSGP--DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPGD---RALLRLLLRRADAVIVMSSELL 146 (366)
T ss_pred HhhcCC--CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccchhh---hHHHHHHHhcCCEEEEeeHHHH
Confidence 344455 899998733 21 111111 1123689999999986232211110 1111222346888888865555
Q ss_pred HHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCcccc
Q 003024 269 RHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIF 348 (856)
Q Consensus 269 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~ 348 (856)
++++... ...++.++|+|++...+.... . . +......++.+|+++||+.+.
T Consensus 147 ~~~~~~~---------------------~~~~~~~i~~~~~~~~~~~~~------~-~-~~~~~~~~~~~i~~~G~~~~~ 197 (366)
T cd03822 147 RALLLRA---------------------YPEKIAVIPHGVPDPPAEPPE------S-L-KALGGLDGRPVLLTFGLLRPY 197 (366)
T ss_pred HHHHhhc---------------------CCCcEEEeCCCCcCcccCCch------h-h-HhhcCCCCCeEEEEEeeccCC
Confidence 5554310 023567789999976653211 1 1 111122567899999999999
Q ss_pred CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEc-CCCCHHHHH
Q 003024 349 KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFID-KPVTLSERA 427 (856)
Q Consensus 349 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~-~~v~~~el~ 427 (856)
||+..+++|++.+.+++|+++ |+.+|... +.......+..+++.+. +..+.+.+. +.++.+++.
T Consensus 198 K~~~~ll~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~~-------~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 198 KGLELLLEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAERL-------GLADRVIFINRYLPDEELP 262 (366)
T ss_pred CCHHHHHHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHhc-------CCCCcEEEecCcCCHHHHH
Confidence 999999999999999888654 88777432 11111111111222232 233344444 449999999
Q ss_pred HHHHhcceeeeccccc--cCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc---CCceeeCCCCHHHH
Q 003024 428 AYYTIAECVVVTAVRD--GMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL---SGAIRVNPWNIEAT 502 (856)
Q Consensus 428 aly~~ADv~vvtS~~E--G~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~al~VnP~d~~~~ 502 (856)
.+|+.||++++||..| |++++++|||+|+. |+|+|+.+| .+.+ ..|+++++.|++++
T Consensus 263 ~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-----------------PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~ 324 (366)
T cd03822 263 ELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-----------------PVISTPVGH-AEEVLDGGTGLLVPPGDPAAL 324 (366)
T ss_pred HHHhhcCEEEecccccccccchHHHHHHHcCC-----------------CEEecCCCC-hheeeeCCCcEEEcCCCHHHH
Confidence 9999999999999999 99999999999955 999999988 6666 34899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHH
Q 003024 503 AEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (856)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (856)
|++|.++++.+ .++....++.++++.++++..+++++.+.+
T Consensus 325 ~~~l~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 325 AEAIRRLLADP-ELAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHHHHHHcCh-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 99999999854 445556677788888899999999887644
No 79
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.81 E-value=2.8e-18 Score=189.88 Aligned_cols=273 Identities=17% Similarity=0.241 Sum_probs=182.2
Q ss_pred CEEEEeCcc-cchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHH------HHHhHhCCEEcccCHHHHHHHHHH
Q 003024 202 DYVWIHDYH-LMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEI------LKALLNADLIGFHTFDYARHFLSC 274 (856)
Q Consensus 202 D~VwihDyh-l~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~ei------l~~ll~~dligf~t~~~~~~Fl~~ 274 (856)
|+|++|+.. ....+.....+..+.++.+..|-.++...... -+.+..+ -..+-.+|.+.+.+.........
T Consensus 89 dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~- 166 (375)
T cd03821 89 DIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPH-KALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR- 166 (375)
T ss_pred CEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccccc-chhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh-
Confidence 999999843 33333322223357889999997665433100 0011100 11123456665555333222211
Q ss_pred HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccCCH
Q 003024 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGV 351 (856)
Q Consensus 275 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~KGi 351 (856)
.+...++.++|+|+|.+.+.... .... ++.+ .++++++++||+++.||+
T Consensus 167 --------------------~~~~~~~~vi~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~~i~~~G~~~~~K~~ 218 (375)
T cd03821 167 --------------------LGLKAPIAVIPNGVDIPPFAALP---SRGR-----RRKFPILPDKRIILFLGRLHPKKGL 218 (375)
T ss_pred --------------------hCCcccEEEcCCCcChhccCcch---hhhh-----hhhccCCCCCcEEEEEeCcchhcCH
Confidence 11234577899999988775321 1110 2222 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHH
Q 003024 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYT 431 (856)
Q Consensus 352 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 431 (856)
..+++|+.++.+++|+++ |+.+|... +. + ...++.++.+. +..+.+.+.|.++.+++..+|+
T Consensus 219 ~~li~a~~~l~~~~~~~~----l~i~G~~~---~~-~---~~~~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~~ 280 (375)
T cd03821 219 DLLIEAFAKLAERFPDWH----LVIAGPDE---GG-Y---RAELKQIAAAL-------GLEDRVTFTGMLYGEDKAAALA 280 (375)
T ss_pred HHHHHHHHHhhhhcCCeE----EEEECCCC---cc-h---HHHHHHHHHhc-------CccceEEEcCCCChHHHHHHHh
Confidence 999999999999888765 77777422 11 1 12222222222 3345667889999999999999
Q ss_pred hcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC-C-ceeeCCCCHHHHHHHHHHH
Q 003024 432 IAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G-AIRVNPWNIEATAEAMHEA 509 (856)
Q Consensus 432 ~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-al~VnP~d~~~~A~ai~~a 509 (856)
.||++++||..||||++++|||+|+. |+|+|+.+|..+.+. + ++++ |.+.++++++|.++
T Consensus 281 ~adv~v~ps~~e~~~~~~~Eama~G~-----------------PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l 342 (375)
T cd03821 281 DADLFVLPSHSENFGIVVAEALACGT-----------------PVVTTDKVPWQELIEYGCGWVV-DDDVDALAAALRRA 342 (375)
T ss_pred hCCEEEeccccCCCCcHHHHHHhcCC-----------------CEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHHHHH
Confidence 99999999999999999999999955 999999999888884 3 5555 45669999999999
Q ss_pred HcCCHHHHHHHHHHHhhh-hhcCCHHHHHHHHH
Q 003024 510 IQMNEAEKQLRHEKHYRY-VSTHDVAYWARSFF 541 (856)
Q Consensus 510 L~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 541 (856)
++++ +++....++.+++ ...+++...++.++
T Consensus 343 ~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 343 LELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9876 5566666666777 56678777777664
No 80
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.81 E-value=7.6e-19 Score=203.46 Aligned_cols=197 Identities=13% Similarity=0.105 Sum_probs=129.4
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCC
Q 003024 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSAD 667 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~ 667 (856)
.++|+|++|+||||++ .+..++++++++|++| +++|+.|++||||+...+..++..+. ..++|++||+.|+.+++
T Consensus 414 ~~~KLIfsDLDGTLLd---~d~~i~~~t~eAL~~L-~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~ 489 (694)
T PRK14502 414 QFKKIVYTDLDGTLLN---PLTYSYSTALDALRLL-KDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKD 489 (694)
T ss_pred ceeeEEEEECcCCCcC---CCCccCHHHHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCC
Confidence 4579999999999999 6677888999999997 88899999999999999998887664 34699999999998654
Q ss_pred c------------ceEecCCCCcccHHHHHHHHHHHHhhcC----------CcceEEecccceEEe----e---------
Q 003024 668 E------------EWQNCGQSVDFGWIQIAEPVMKLYTEST----------DGSYIEIKESALVWH----H--------- 712 (856)
Q Consensus 668 ~------------~w~~~~~~~~~~w~~~v~~i~~~~~~~~----------~Gs~ie~k~~~l~~~----~--------- 712 (856)
. .+.......+ .+.+.++++...+.. ...++.... ...+. +
T Consensus 490 ~~~~~~~~~~~~~~~iI~~~~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~-d~~~~ei~~~TgL~~~~a~ 565 (694)
T PRK14502 490 YFRLPFAYDRVAGNYLVIELGMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFG-DMSVEDVSRLTDLNLKQAE 565 (694)
T ss_pred cccccccccccCCCeEEEEcCCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCC-cccHHHHHHhhCCCHHHHH
Confidence 1 0000000111 122333333222211 011111100 00000 0
Q ss_pred ----ecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEE--eCCc
Q 003024 713 ----RDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCI--GDDR 786 (856)
Q Consensus 713 ----~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlai--GD~~ 786 (856)
+.....+......+.++.+.+.+......+..++.++||. .++|||.|+++|++.+ +++.+++++| ||+.
T Consensus 566 ~a~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~---gI~~~eViafalGDs~ 641 (694)
T PRK14502 566 LAKQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF---RLNFGNIHTFGLGDSE 641 (694)
T ss_pred HHhhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh---CCCccceEEEEcCCcH
Confidence 0000001001112334444444444455666799999999 5999999999999999 9999999999 9999
Q ss_pred hhHHHHHHccc
Q 003024 787 SDEDMFEIIGN 797 (856)
Q Consensus 787 ND~~Mf~~ag~ 797 (856)
||++||++++.
T Consensus 642 NDisMLe~Ag~ 652 (694)
T PRK14502 642 NDYSMLETVDS 652 (694)
T ss_pred hhHHHHHhCCc
Confidence 99999999995
No 81
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.80 E-value=4.6e-18 Score=188.36 Aligned_cols=276 Identities=18% Similarity=0.138 Sum_probs=190.6
Q ss_pred HHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCch----HHHHH-HhHhCCEEcccCHHHHH
Q 003024 195 EVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVR----EEILK-ALLNADLIGFHTFDYAR 269 (856)
Q Consensus 195 ~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r----~eil~-~ll~~dligf~t~~~~~ 269 (856)
+..+| |+|++|......+....-.+..++++.+++|..||..-........ ..+.+ ..-.+|.+-+.+.....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 55677 8999996654333333333345788999999888743221111111 11222 23357777777765554
Q ss_pred HHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccC
Q 003024 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFK 349 (856)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~K 349 (856)
.+.. .+ ...+.++|+|+|...+.+.... .....++. ..++++++++||+.+.|
T Consensus 158 ~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~--~~~~~~i~~~G~~~~~k 210 (364)
T cd03814 158 ELRA--------------------RG--FRRVRLWPRGVDTELFHPRRRD---EALRARLG--PPDRPVLLYVGRLAPEK 210 (364)
T ss_pred HHhc--------------------cC--CCceeecCCCccccccCccccc---HHHHHHhC--CCCCeEEEEEecccccc
Confidence 2221 00 1245678999998877532111 11111111 24678899999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHH
Q 003024 350 GVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAY 429 (856)
Q Consensus 350 Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~al 429 (856)
|+..+++|+..+.++ |+++ |+.+|. +++...++ +..+-+.+.+.++.+++..+
T Consensus 211 ~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~-----------------~~~~~v~~~g~~~~~~~~~~ 263 (364)
T cd03814 211 NLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE-----------------ARYPNVHFLGFLDGEELAAA 263 (364)
T ss_pred CHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh-----------------ccCCcEEEEeccCHHHHHHH
Confidence 999999999999877 6554 777773 23322222 01123456667899999999
Q ss_pred HHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHH
Q 003024 430 YTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAM 506 (856)
Q Consensus 430 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai 506 (856)
|+.||+++.||..||+|++++|||+|+. |+|+|+.+|..+.+. .|++++|.|.++++++|
T Consensus 264 ~~~~d~~l~~s~~e~~~~~~lEa~a~g~-----------------PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i 326 (364)
T cd03814 264 YASADVFVFPSRTETFGLVVLEAMASGL-----------------PVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAAL 326 (364)
T ss_pred HHhCCEEEECcccccCCcHHHHHHHcCC-----------------CEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHH
Confidence 9999999999999999999999999954 999999999988884 48999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHH
Q 003024 507 HEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (856)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (856)
.++++. ++++....+..++.+..+++..+++.+++.+
T Consensus 327 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 327 AALLAD-PELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHcC-HHHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 999974 4555666667777788899999988887643
No 82
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.80 E-value=2.2e-18 Score=196.92 Aligned_cols=358 Identities=15% Similarity=0.181 Sum_probs=206.0
Q ss_pred ccccccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEc
Q 003024 154 QHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEV-INPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLH 232 (856)
Q Consensus 154 ~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~-~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH 232 (856)
.-||-.|+--.+ .....+++...=.|.. ..|-..+.+. .....|+++.||++.-....+||++.++++..|+.|
T Consensus 106 ~~lW~~~~i~s~---~~~~d~nea~~fgy~~--~~~i~~~~~~~~~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtH 180 (590)
T cd03793 106 GELWELCGIGSP---EGDRETNDAIIFGFLV--AWFLGEFAEQFDDEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTH 180 (590)
T ss_pred HHHHHHcCCCCC---CCCCcchHHHHHHHHH--HHHHHHHHhhccCCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEec
Confidence 458988887533 2223444443333421 1222222222 111259999999999999999999999999999999
Q ss_pred cCCCChHHHhcCCch-HHHHHHhHhCCEEcccC-------HHHHHHHHH-----HHHhhhCceecccCceeeEEECCEEE
Q 003024 233 SPFPSSEIYRTLPVR-EEILKALLNADLIGFHT-------FDYARHFLS-----CCSRMLGLEYQSKRGYIGLEYYGRTV 299 (856)
Q Consensus 233 ~PfP~~e~~~~lp~r-~eil~~ll~~dligf~t-------~~~~~~Fl~-----~~~r~lg~~~~~~~~~~~~~~~gr~~ 299 (856)
. .++-|.|-.. ..+-. ++-.|.- .-+.++.++ .+++++.++....+. ....+++..
T Consensus 181 A----T~~GR~l~~g~~~~y~-----~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~E--~~~Ll~~~p 249 (590)
T cd03793 181 A----TLLGRYLCAGNVDFYN-----NLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAYE--AEHLLKRKP 249 (590)
T ss_pred c----cccccccccCCcccch-----hhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHHH--HHHHhCCCC
Confidence 4 4444431110 00000 0000000 002222222 122222222111110 011233333
Q ss_pred EEEEeecccCchHHHHHhcC----chHHHHHHH-----HHHHc---CCCeEEEe-ccCccc-cCCHHHHHHHHHHHHHhC
Q 003024 300 GIKIMPVGIHMGQIESVLRL----ADKDWRVQE-----LKQQF---EGKTVLLG-VDDMDI-FKGVDLKLLAMEHLLKQH 365 (856)
Q Consensus 300 ~i~i~p~GId~~~~~~~~~~----~~~~~~~~~-----l~~~~---~~k~iil~-VdRld~-~KGi~~~l~A~~~ll~~~ 365 (856)
.+ |+|+|||+..|.+.... ...++++.+ ++.+| .+++++++ +||+++ .||++.+|+|+.++-..-
T Consensus 250 d~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l 328 (590)
T cd03793 250 DV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLL 328 (590)
T ss_pred CE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHH
Confidence 33 89999999998643211 011222222 35544 36788888 799999 999999999999875521
Q ss_pred CCC-cCceEEEEEecCCCCCc---------hhHHHHHHHHHHHHHHHhcc---------c--------------------
Q 003024 366 PKW-QGRAVLVQIANPARGRG---------KDLEEIQAEIHATCKRINET---------F-------------------- 406 (856)
Q Consensus 366 p~~-~~~vvLvqi~~p~r~~~---------~~~~~l~~~~~~lv~~IN~~---------~-------------------- 406 (856)
..- .++-|+..|..|+...+ .-.+++++.+.++..+|+.+ .
T Consensus 329 ~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~ 408 (590)
T cd03793 329 KVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIF 408 (590)
T ss_pred HhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHH
Confidence 111 12233344444554331 22455666666666666665 1
Q ss_pred ---------------------------------CC-CCcccEEEEcCCCC------HHHHHHHHHhcceeeeccccccCC
Q 003024 407 ---------------------------------GR-PGYEPVVFIDKPVT------LSERAAYYTIAECVVVTAVRDGMN 446 (856)
Q Consensus 407 ---------------------------------~~-~~~~pvv~~~~~v~------~~el~aly~~ADv~vvtS~~EG~n 446 (856)
.. .+...|+|....++ ..+...+|+.||+||+||.+||||
T Consensus 409 ~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG 488 (590)
T cd03793 409 ALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWG 488 (590)
T ss_pred hhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCC
Confidence 00 11223444333222 235788999999999999999999
Q ss_pred CcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccc----cccC----CceeeC-------CCCHHHHHHHHHHHHc
Q 003024 447 LTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS----PSLS----GAIRVN-------PWNIEATAEAMHEAIQ 511 (856)
Q Consensus 447 Lv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l~----~al~Vn-------P~d~~~~A~ai~~aL~ 511 (856)
++++|||||+. |+|+|..+|.. +.+. .|+.|. +.+++++|++|.+.++
T Consensus 489 ~~~lEAma~G~-----------------PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~ 551 (590)
T cd03793 489 YTPAECTVMGI-----------------PSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQ 551 (590)
T ss_pred cHHHHHHHcCC-----------------CEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhC
Confidence 99999999954 99999999984 4432 378887 5667899999999887
Q ss_pred CCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Q 003024 512 MNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (856)
Q Consensus 512 m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (856)
++..++........+.....++.+-+..+++.-.
T Consensus 552 ~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 552 LSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred CcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 6544443333333355566777777776665433
No 83
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.80 E-value=4.6e-18 Score=187.47 Aligned_cols=282 Identities=22% Similarity=0.225 Sum_probs=197.0
Q ss_pred HcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHH
Q 003024 196 VINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCC 275 (856)
Q Consensus 196 ~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~ 275 (856)
..++ |+|++|......+......+..++++.+..|.+++....... ..+......+-.+|.+-+.+......+.+..
T Consensus 91 ~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 167 (377)
T cd03798 91 RFRP--DLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG 167 (377)
T ss_pred cCCC--CEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc
Confidence 4455 899999655544444444444568899999987765432211 1233333455678999988876666655411
Q ss_pred HhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHH
Q 003024 276 SRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKL 355 (856)
Q Consensus 276 ~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l 355 (856)
.....+.++|+|+|...+..... .....+ ....++..++++||+++.||+..++
T Consensus 168 --------------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li 221 (377)
T cd03798 168 --------------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLI 221 (377)
T ss_pred --------------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHH
Confidence 11235677899999877653211 111111 1224678999999999999999999
Q ss_pred HHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcce
Q 003024 356 LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAEC 435 (856)
Q Consensus 356 ~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv 435 (856)
+|++.+.+++|++ .|+.+|. ++....+++.++ + .+..+.+.+.+.++.+++..+|+.||+
T Consensus 222 ~~~~~~~~~~~~~----~l~i~g~-----~~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~~~~~ad~ 281 (377)
T cd03798 222 EALARLLKKRPDV----HLVIVGD-----GPLREALEALAA----E-------LGLEDRVTFLGAVPHEEVPAYYAAADV 281 (377)
T ss_pred HHHHHHHhcCCCe----EEEEEcC-----CcchHHHHHHHH----h-------cCCcceEEEeCCCCHHHHHHHHHhcCe
Confidence 9999998887754 4776663 233333333332 2 134456677889999999999999999
Q ss_pred eeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHcC
Q 003024 436 VVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQM 512 (856)
Q Consensus 436 ~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m 512 (856)
++.||..||+|++++|||+|+. |+|+|+.+|..+.+. .|+++++.|+++++++|.+++++
T Consensus 282 ~i~~~~~~~~~~~~~Ea~~~G~-----------------pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~ 344 (377)
T cd03798 282 FVLPSLREGFGLVLLEAMACGL-----------------PVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLAD 344 (377)
T ss_pred eecchhhccCChHHHHHHhcCC-----------------CEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcC
Confidence 9999999999999999999954 999999998888773 36899999999999999999987
Q ss_pred CHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Q 003024 513 NEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (856)
Q Consensus 513 ~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (856)
+.. +...+........+++..+++.+.+.++
T Consensus 345 ~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 345 PWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred cHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 654 2222333444566788888887776654
No 84
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.80 E-value=5e-18 Score=188.09 Aligned_cols=270 Identities=21% Similarity=0.258 Sum_probs=185.7
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCC---chH----HH-HHHhHhCCEEcccC
Q 003024 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLP---VRE----EI-LKALLNADLIGFHT 264 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp---~r~----ei-l~~ll~~dligf~t 264 (856)
+.+..+| |+|++|+...+........+..++++.+.+|.+|+....+.... ... .+ ...+-.+|.+-+.+
T Consensus 79 ~~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s 156 (374)
T cd03817 79 ILKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPS 156 (374)
T ss_pred HHhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEecc
Confidence 3455666 89999987655444444444458899999998877332221111 000 11 12234577777777
Q ss_pred HHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEe
Q 003024 265 FDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLG 341 (856)
Q Consensus 265 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~ 341 (856)
......+.. .+....+.++|+|+|...+..... .. .++.+ +++++|++
T Consensus 157 ~~~~~~~~~---------------------~~~~~~~~vi~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~i~~ 207 (374)
T cd03817 157 EKIADLLRE---------------------YGVKRPIEVIPTGIDLDRFEPVDG----DD----ERRKLGIPEDEPVLLY 207 (374)
T ss_pred HHHHHHHHh---------------------cCCCCceEEcCCccchhccCccch----hH----HHHhcCCCCCCeEEEE
Confidence 654333321 011123678899999877653211 11 12222 46788999
Q ss_pred ccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCC
Q 003024 342 VDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV 421 (856)
Q Consensus 342 VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v 421 (856)
+||+.+.||+..+++|++.+.++.+++ .|+.+|. ++.. .++++++++. +..+.+.+.+.+
T Consensus 208 ~G~~~~~k~~~~l~~~~~~~~~~~~~~----~l~i~G~-----~~~~----~~~~~~~~~~-------~~~~~v~~~g~~ 267 (374)
T cd03817 208 VGRLAKEKNIDFLIRAFARLLKEEPDV----KLVIVGD-----GPER----EELEELAREL-------GLADRVIFTGFV 267 (374)
T ss_pred EeeeecccCHHHHHHHHHHHHHhCCCe----EEEEEeC-----CchH----HHHHHHHHHc-------CCCCcEEEeccC
Confidence 999999999999999999998886654 4777763 2332 2333343332 223456678899
Q ss_pred CHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCC
Q 003024 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWN 498 (856)
Q Consensus 422 ~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d 498 (856)
+.+++..+|+.||+++.||..||+|++.+|||+|+. |+|+|..+|..+.+. +|+++++.|
T Consensus 268 ~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-----------------PvI~~~~~~~~~~i~~~~~g~~~~~~~ 330 (374)
T cd03817 268 PREELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-----------------PVVAVDAPGLPDLVADGENGFLFPPGD 330 (374)
T ss_pred ChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-----------------cEEEeCCCChhhheecCceeEEeCCCC
Confidence 999999999999999999999999999999999954 999999998888873 489999988
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCC
Q 003024 499 IEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHD 532 (856)
Q Consensus 499 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 532 (856)
. +++++|.++++++... +...++.++++..++
T Consensus 331 ~-~~~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~ 362 (374)
T cd03817 331 E-ALAEALLRLLQDPELR-RRLSKNAEESAEKFS 362 (374)
T ss_pred H-HHHHHHHHHHhChHHH-HHHHHHHHHHHHHHH
Confidence 8 9999999999876543 555566777776665
No 85
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.80 E-value=9.3e-18 Score=186.49 Aligned_cols=278 Identities=19% Similarity=0.205 Sum_probs=195.2
Q ss_pred HcCCCCCEEEEeC-cccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCc--------hHHH-HHHhHhCCEEcccCH
Q 003024 196 VINPEDDYVWIHD-YHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPV--------REEI-LKALLNADLIGFHTF 265 (856)
Q Consensus 196 ~~~~~~D~VwihD-yhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~--------r~ei-l~~ll~~dligf~t~ 265 (856)
..+| |+|++|. ..+..++....++..+.++.+.+|..||.......... ...+ -..+-.+|.+-+.+.
T Consensus 97 ~~~~--D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~ 174 (394)
T cd03794 97 RRRP--DVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISP 174 (394)
T ss_pred ccCC--CEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECH
Confidence 3345 8999998 44556666666666689999999998886533221111 1111 123456888888888
Q ss_pred HHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCc
Q 003024 266 DYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDM 345 (856)
Q Consensus 266 ~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRl 345 (856)
...+.+.. .+ ....++.++|+|++...+..... .... .......++.+++++||+
T Consensus 175 ~~~~~~~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~i~~~G~~ 229 (394)
T cd03794 175 GMREYLVR-----RG---------------VPPEKISVIPNGVDLELFKPPPA----DESL-RKELGLDDKFVVLYAGNI 229 (394)
T ss_pred HHHHHHHh-----cC---------------CCcCceEEcCCCCCHHHcCCccc----hhhh-hhccCCCCcEEEEEecCc
Confidence 77766652 01 11235677899999877653211 1111 111122578899999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHH
Q 003024 346 DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSE 425 (856)
Q Consensus 346 d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~e 425 (856)
.+.||+..+++|+.++.+. |++ .|+.+|. ++....+++.+ .. .+...+++ .+.++.++
T Consensus 230 ~~~k~~~~l~~~~~~l~~~-~~~----~l~i~G~-----~~~~~~~~~~~----~~-------~~~~~v~~-~g~~~~~~ 287 (394)
T cd03794 230 GRAQGLDTLLEAAALLKDR-PDI----RFLIVGD-----GPEKEELKELA----KA-------LGLDNVTF-LGRVPKEE 287 (394)
T ss_pred ccccCHHHHHHHHHHHhhc-CCe----EEEEeCC-----cccHHHHHHHH----HH-------cCCCcEEE-eCCCChHH
Confidence 9999999999999999776 554 4777763 33433343332 11 12334554 45899999
Q ss_pred HHHHHHhcceeeeccccccC-----CCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCC
Q 003024 426 RAAYYTIAECVVVTAVRDGM-----NLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPW 497 (856)
Q Consensus 426 l~aly~~ADv~vvtS~~EG~-----nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~ 497 (856)
+.++|+.||++++||..|++ +++.+|||+|+. |+|+|+.+|..+.+. .|+++++.
T Consensus 288 ~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-----------------pvi~~~~~~~~~~~~~~~~g~~~~~~ 350 (394)
T cd03794 288 LPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-----------------PVLASVDGESAELVEEAGAGLVVPPG 350 (394)
T ss_pred HHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-----------------cEEEecCCCchhhhccCCcceEeCCC
Confidence 99999999999999999876 555799999954 999999999998884 48999999
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhh-cCCHHHHHHHH
Q 003024 498 NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVS-THDVAYWARSF 540 (856)
Q Consensus 498 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~ 540 (856)
|+++++++|.++++ +++++....++.++++. .+++..+++++
T Consensus 351 ~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 351 DPEALAAAILELLD-DPEERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred CHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 99999999999995 45666666677777776 78888888765
No 86
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.79 E-value=1e-17 Score=184.67 Aligned_cols=282 Identities=17% Similarity=0.164 Sum_probs=190.6
Q ss_pred HHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHh-HhCCEEcccCHHHHHHHH
Q 003024 194 IEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL-LNADLIGFHTFDYARHFL 272 (856)
Q Consensus 194 ~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l-l~~dligf~t~~~~~~Fl 272 (856)
++..+| |+|++|+++......++.......++.+..|.-++...-+ .......+.+-+ -.+|.+...+......+.
T Consensus 76 ~~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 152 (365)
T cd03807 76 IRRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLGKK-STRLVARLRRLLSSFIPLIVANSAAAAEYHQ 152 (365)
T ss_pred HHhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccccch-hHhHHHHHHHHhccccCeEEeccHHHHHHHH
Confidence 344566 8999999997777776666546788999999766553200 001111111111 235665444443333332
Q ss_pred HHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccC
Q 003024 273 SCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFK 349 (856)
Q Consensus 273 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~K 349 (856)
.. +. ...++.++|+|+|...+..... ....+++++ .++.+++++||+++.|
T Consensus 153 ~~-----~~---------------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K 206 (365)
T cd03807 153 AI-----GY---------------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQK 206 (365)
T ss_pred Hc-----CC---------------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhc
Confidence 20 11 1234567899999877643211 112233334 4678899999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHH
Q 003024 350 GVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAY 429 (856)
Q Consensus 350 Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~al 429 (856)
|+..+++|+..+.+++|+++ |+.+|... .....+.... .+. +..+.+.+.+. .+++..+
T Consensus 207 ~~~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~~~~~~---~~~-------~~~~~v~~~g~--~~~~~~~ 265 (365)
T cd03807 207 DHATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANLELLAL---KEL-------GLEDKVILLGE--RSDVPAL 265 (365)
T ss_pred CHHHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHHHHHHH---Hhc-------CCCceEEEccc--cccHHHH
Confidence 99999999999998887654 77777432 2222222221 111 23334555554 4689999
Q ss_pred HHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC-CceeeCCCCHHHHHHHHHH
Q 003024 430 YTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIEATAEAMHE 508 (856)
Q Consensus 430 y~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~~ 508 (856)
|+.||++++||..||+|++++|||+|+. |+|+|+.+|..+.+. .|+.+++.|+++++++|.+
T Consensus 266 ~~~adi~v~ps~~e~~~~~~~Ea~a~g~-----------------PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~ 328 (365)
T cd03807 266 LNALDVFVLSSLSEGFPNVLLEAMACGL-----------------PVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEA 328 (365)
T ss_pred HHhCCEEEeCCccccCCcHHHHHHhcCC-----------------CEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHH
Confidence 9999999999999999999999999955 999999999988885 4999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHhhhhh-cCCHHHHHHHHHHH
Q 003024 509 AIQMNEAEKQLRHEKHYRYVS-THDVAYWARSFFQD 543 (856)
Q Consensus 509 aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~ 543 (856)
+++.+ +++....++.++++. .+++...++.+.+-
T Consensus 329 l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 329 LLADP-ALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHhCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99866 455555566677765 47888888877653
No 87
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.79 E-value=4e-18 Score=194.16 Aligned_cols=186 Identities=12% Similarity=0.021 Sum_probs=126.2
Q ss_pred EEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccC-c-cccCCHHHHHHHHHHHHHhCCCCcCceEEEE
Q 003024 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDD-M-DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ 376 (856)
Q Consensus 299 ~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdR-l-d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq 376 (856)
.++.++|+|||++.+..... . ...+ ...++++|++|+| + ++.||+..+++|+.++ .+ ++.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~---~----~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAE---L----PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccc---c----cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEE
Confidence 36778999999753221100 0 0001 1246788999999 4 4789999999999875 23 356888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeee
Q 003024 377 IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (856)
Q Consensus 377 i~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 456 (856)
+|... ... . ..+.++....+..++..+|+.||+||+||..|||++|++|||||+
T Consensus 277 vG~g~-----~~~--~-------------------~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G 330 (405)
T PRK10125 277 FGKFS-----PFT--A-------------------GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIG 330 (405)
T ss_pred EcCCC-----ccc--c-------------------cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcC
Confidence 87421 100 0 113333323367899999999999999999999999999999995
Q ss_pred cCCCCCCCCCCCCCCCCceEEecCCcccccccC--CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhh-hhcCCH
Q 003024 457 QGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS--GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRY-VSTHDV 533 (856)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~ 533 (856)
. |||+|+.+|+.+.+. +|++|+|.|++++|+++...+... ......++.++. ...++.
T Consensus 331 ~-----------------PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~ 391 (405)
T PRK10125 331 V-----------------PVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSG 391 (405)
T ss_pred C-----------------CEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCH
Confidence 4 999999999988773 599999999999998654333210 000011223333 455888
Q ss_pred HHHHHHHHHHH
Q 003024 534 AYWARSFFQDM 544 (856)
Q Consensus 534 ~~W~~~~l~~l 544 (856)
...++++++-.
T Consensus 392 ~~~~~~y~~lY 402 (405)
T PRK10125 392 QQMLEEYVNFY 402 (405)
T ss_pred HHHHHHHHHHH
Confidence 88888776644
No 88
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.79 E-value=4.2e-18 Score=191.66 Aligned_cols=281 Identities=17% Similarity=0.111 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCC---ChHHHhcC-CchHHHHHHhHhC
Q 003024 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFP---SSEIYRTL-PVREEILKALLNA 257 (856)
Q Consensus 182 Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP---~~e~~~~l-p~r~eil~~ll~~ 257 (856)
..+.-+.|.+++.. .. ..|+|.+|-.+.... .+.......+...++|...- .......+ ...+.++..+-.+
T Consensus 83 ~~~l~~~~l~~l~~-~~-~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (372)
T cd04949 83 EEELFAFFLDELNK-DT-KPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKV 158 (372)
T ss_pred HHHHHHHHHHHHhc-CC-CCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhC
Confidence 33444445555543 22 348999987776655 23333445667788885321 11000000 1124455556678
Q ss_pred CEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCe
Q 003024 258 DLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKT 337 (856)
Q Consensus 258 dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~ 337 (856)
|.|.+.+..-.+.+.... + ....+.++|+|++...+.... .....+.
T Consensus 159 d~ii~~s~~~~~~l~~~~----~----------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~ 205 (372)
T cd04949 159 DGVIVATEQQKQDLQKQF----G----------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPH 205 (372)
T ss_pred CEEEEccHHHHHHHHHHh----C----------------CCCceEEEcccccChhhcccc-------------hhhcCCC
Confidence 888888876665554311 1 011267899999987664210 0113566
Q ss_pred EEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEE
Q 003024 338 VLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFI 417 (856)
Q Consensus 338 iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~ 417 (856)
.++++||+.+.||+..+++|+.++.+++|+++ |+.+|.. ++...++..+ .+. +....+.+
T Consensus 206 ~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~~~~~----~~~-------~~~~~v~~ 265 (372)
T cd04949 206 KIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYG-----DEEEKLKELI----EEL-------GLEDYVFL 265 (372)
T ss_pred eEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeC-----chHHHHHHHH----HHc-------CCcceEEE
Confidence 89999999999999999999999999999865 7777743 2323333332 222 23345666
Q ss_pred cCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCc-ccccccC---Ccee
Q 003024 418 DKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFI-GCSPSLS---GAIR 493 (856)
Q Consensus 418 ~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~al~ 493 (856)
.|. .+++.++|+.||++|+||..||||++.+|||+|+. |+|+|+.. |..+.+. +|++
T Consensus 266 ~g~--~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-----------------PvI~~~~~~g~~~~v~~~~~G~l 326 (372)
T cd04949 266 KGY--TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-----------------PVISYDVNYGPSEIIEDGENGYL 326 (372)
T ss_pred cCC--CCCHHHHHhhhhEEEecccccccChHHHHHHhCCC-----------------CEEEecCCCCcHHHcccCCCceE
Confidence 663 56799999999999999999999999999999954 99999987 7777773 4899
Q ss_pred eCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHH
Q 003024 494 VNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARS 539 (856)
Q Consensus 494 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 539 (856)
++|.|++++|++|..+++.+ +.+....++.++...++++..++++
T Consensus 327 v~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 327 VPKGDIEALAEAIIELLNDP-KLLQKFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred eCCCcHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhhHHHHHhc
Confidence 99999999999999999865 4555556666666667776666553
No 89
>PHA01633 putative glycosyl transferase group 1
Probab=99.79 E-value=1.6e-18 Score=190.24 Aligned_cols=193 Identities=17% Similarity=0.181 Sum_probs=142.4
Q ss_pred eecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCC
Q 003024 304 MPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARG 383 (856)
Q Consensus 304 ~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~ 383 (856)
+|.|||.+.|.+... ...+..+++...+.+..++++|+|+++.||+..+++|++++.+++|++..++.|+.+|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 467999988863210 01112222222235677899999999999999999999999999998876677776651
Q ss_pred CchhHHHHHHHHHHHHHHHhcccCCCCcc-cEEEEc--CCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCC
Q 003024 384 RGKDLEEIQAEIHATCKRINETFGRPGYE-PVVFID--KPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVS 460 (856)
Q Consensus 384 ~~~~~~~l~~~~~~lv~~IN~~~~~~~~~-pvv~~~--~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~ 460 (856)
. ++.++ +.. .|.++. +.++.+++.++|+.||+||+||..||||++++|||+|+.
T Consensus 192 --~-------~~~~l-----------~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~--- 248 (335)
T PHA01633 192 --K-------QFTQL-----------EVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT--- 248 (335)
T ss_pred --H-------HHHHc-----------CCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC---
Confidence 1 11111 111 244442 677899999999999999999999999999999999954
Q ss_pred CCCCCCCCCCCCCceEEecCCcccccccCC---------------------ceeeCCCCHHHHHHHHHHHHcCCHHHHHH
Q 003024 461 GSESSSESSAPKKSMLVVSEFIGCSPSLSG---------------------AIRVNPWNIEATAEAMHEAIQMNEAEKQL 519 (856)
Q Consensus 461 ~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---------------------al~VnP~d~~~~A~ai~~aL~m~~~er~~ 519 (856)
|+|+|..+|..+..++ |+.++++|++++|++|.+++.+.+.+ +
T Consensus 249 --------------PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~--~ 312 (335)
T PHA01633 249 --------------PVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDRE--E 312 (335)
T ss_pred --------------CEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccChh--h
Confidence 9999988877765331 45778899999999999998876433 3
Q ss_pred HHHHHhhhhhcCCHHHHHHHHH
Q 003024 520 RHEKHYRYVSTHDVAYWARSFF 541 (856)
Q Consensus 520 r~~~~~~~v~~~~~~~W~~~~l 541 (856)
|..+.++..+++++..-+++|+
T Consensus 313 ~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 313 RSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred hhHHHHHHHHhcCHHHHHHHhh
Confidence 3445678888898888877765
No 90
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.78 E-value=2.3e-18 Score=188.27 Aligned_cols=264 Identities=16% Similarity=0.148 Sum_probs=180.1
Q ss_pred HHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHH
Q 003024 195 EVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSC 274 (856)
Q Consensus 195 ~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~ 274 (856)
+..+| |+|++|+.+...+...+... ..++.+..|..++....... +.......+-.+|.+-+.+......+.
T Consensus 80 ~~~~~--d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~-- 151 (348)
T cd03820 80 KNNKP--DVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRLR--RLLLRRLLYRRADAVVVLTEEDRALYY-- 151 (348)
T ss_pred cccCC--CEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhhH--HHHHHHHHHhcCCEEEEeCHHHHHHhh--
Confidence 33455 99999998822222222221 14888888977654332210 110122234457777776654431000
Q ss_pred HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHH
Q 003024 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK 354 (856)
Q Consensus 275 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~ 354 (856)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+
T Consensus 152 --------------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l 196 (348)
T cd03820 152 --------------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLL 196 (348)
T ss_pred --------------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHH
Confidence 1112356778999997754311 12467889999999999999999
Q ss_pred HHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 003024 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAE 434 (856)
Q Consensus 355 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 434 (856)
++|++++.+.+|+++ |+.+|. +++...+++ ++.+. +..+.+.+.+. .+++..+|+.||
T Consensus 197 ~~~~~~l~~~~~~~~----l~i~G~-----~~~~~~~~~----~~~~~-------~~~~~v~~~g~--~~~~~~~~~~ad 254 (348)
T cd03820 197 IEAWAKIAKKHPDWK----LRIVGD-----GPEREALEA----LIKEL-------GLEDRVILLGF--TKNIEEYYAKAS 254 (348)
T ss_pred HHHHHHHHhcCCCeE----EEEEeC-----CCCHHHHHH----HHHHc-------CCCCeEEEcCC--cchHHHHHHhCC
Confidence 999999988888754 777763 233333333 33332 33455666665 689999999999
Q ss_pred eeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-C---CceeeCCCCHHHHHHHHHHHH
Q 003024 435 CVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S---GAIRVNPWNIEATAEAMHEAI 510 (856)
Q Consensus 435 v~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~---~al~VnP~d~~~~A~ai~~aL 510 (856)
++++||..||||++++|||+|+. |+|+|+..|..+.+ . .|+++++.|+++++++|.+++
T Consensus 255 ~~i~ps~~e~~~~~~~Ea~a~G~-----------------Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll 317 (348)
T cd03820 255 IFVLTSRFEGFPMVLLEAMAFGL-----------------PVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLM 317 (348)
T ss_pred EEEeCccccccCHHHHHHHHcCC-----------------CEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHH
Confidence 99999999999999999999955 99999876655444 2 589999999999999999999
Q ss_pred cCCHHHHHHHHHHHhhhhhcCCHHHHHHHHH
Q 003024 511 QMNEAEKQLRHEKHYRYVSTHDVAYWARSFF 541 (856)
Q Consensus 511 ~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 541 (856)
+.+ +.++...++.++.++.+++..++++|.
T Consensus 318 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 318 EDE-ELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred cCH-HHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 844 444455555677888888888887764
No 91
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.78 E-value=4.5e-18 Score=178.07 Aligned_cols=190 Identities=15% Similarity=0.111 Sum_probs=116.7
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCCc---
Q 003024 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADE--- 668 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~~--- 668 (856)
+|++|+||||++ .+. ++++++++|++| ++.|+.|+++|||++..+..++..+. ..++|++||+.|..+...
T Consensus 1 li~~DlDGTLl~---~~~-~~~~~~~ai~~l-~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~ 75 (225)
T TIGR02461 1 VIFTDLDGTLLP---PGY-EPGPAREALEEL-KDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPF 75 (225)
T ss_pred CEEEeCCCCCcC---CCC-CchHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccc
Confidence 589999999998 433 556799999997 77899999999999999999886654 346899999999875421
Q ss_pred ------------ceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEe---c----ccceEEe---eec-CC-CCCCchhH
Q 003024 669 ------------EWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEI---K----ESALVWH---HRD-AD-PGFGSSQA 724 (856)
Q Consensus 669 ------------~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~---k----~~~l~~~---~~~-~d-p~~~~~~a 724 (856)
.+.... + .+.++++++...+..+-.+... . ...+... ... .+ .+......
T Consensus 76 ~~~~~~~~~~~~i~~~~l---~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~ 149 (225)
T TIGR02461 76 PVGAGREVGNYEVIELGK---P---VAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLWS 149 (225)
T ss_pred cccccccCCCeEEEEcCC---C---HHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCCC
Confidence 122211 1 1223333332222111000000 0 0000000 000 00 00000001
Q ss_pred HHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCC--CcceEEEEeCCchhHHHHHHccc
Q 003024 725 KELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGR--HADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 725 ~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi--~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
++....+.+.+....+.+..+..++++. .++|||.|++.+++.+ ++ +.+++++|||+.||++||+.+|.
T Consensus 150 ~e~~~~~~~~~~~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~---~~~~~~~~~i~~GD~~nD~~ml~~ag~ 220 (225)
T TIGR02461 150 REGWEAILVTARARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLY---KLRPGAIESVGLGDSENDFPMFEVVDL 220 (225)
T ss_pred HHHHHHHHHHHHHcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHh---ccccCcccEEEEcCCHHHHHHHHhCCC
Confidence 1222222222233445666677778864 5999999999999988 66 56689999999999999999995
No 92
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.77 E-value=1.2e-17 Score=187.70 Aligned_cols=240 Identities=15% Similarity=0.129 Sum_probs=165.2
Q ss_pred HHHHHcCCCCCEEEEeCcccchHHHHHHhhc-CCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHH
Q 003024 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRF-TRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARH 270 (856)
Q Consensus 192 ~i~~~~~~~~D~VwihDyhl~llp~~lr~~~-~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~ 270 (856)
++++..+| |+|++|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+-..+..-.+.
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 45566677 899999987776666666543 23456666776554332211 11234678877776554444
Q ss_pred HHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCcc--cc
Q 003024 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMD--IF 348 (856)
Q Consensus 271 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld--~~ 348 (856)
+.. .|+. ..++.++|+|||.+.+.. ..+ ...++++++++||+. ..
T Consensus 148 ~~~-----~~~~---------------~~ki~vi~N~id~~~~~~--~~~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGIS---------------AQRISVIYNPVEIKTIII--PPP-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCCC---------------HHHEEEEcCCCCHHHccC--CCc-----------ccCCCcEEEEEEEEecccC
Confidence 332 1221 124566899999765421 100 013467899999996 45
Q ss_pred CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCC--CHHHH
Q 003024 349 KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPV--TLSER 426 (856)
Q Consensus 349 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v--~~~el 426 (856)
||+..+++|+.++. + ++.|+++|. |++.+++ ++++++. +..+.+.|.|.+ +.+++
T Consensus 195 k~~~~l~~a~~~~~---~----~~~l~ivG~-----g~~~~~l----~~~~~~~-------~l~~~v~f~G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQTT---G----EWQLHIIGD-----GSDFEKC----KAYSREL-------GIEQRIIWHGWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhhC---C----CeEEEEEeC-----CccHHHH----HHHHHHc-------CCCCeEEEecccCCcHHHH
Confidence 99999999998762 2 456888874 4444444 4444443 233355666655 45899
Q ss_pred HHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecC-CcccccccC---CceeeCCCCHHHH
Q 003024 427 AAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE-FIGCSPSLS---GAIRVNPWNIEAT 502 (856)
Q Consensus 427 ~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~---~al~VnP~d~~~~ 502 (856)
..+|+.||++|+||..||||++++|||||+. |+|+|+ .+|+.+.+. .|++|+|.|++++
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~-----------------Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~l 314 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSYGI-----------------PCISSDCMSGPRDIIKPGLNGELYTPGNIDEF 314 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHcCC-----------------CEEEeCCCCChHHHccCCCceEEECCCCHHHH
Confidence 9999999999999999999999999999955 999999 888888773 3899999999999
Q ss_pred HHHHHHHHcCCH
Q 003024 503 AEAMHEAIQMNE 514 (856)
Q Consensus 503 A~ai~~aL~m~~ 514 (856)
|++|.+.++.++
T Consensus 315 a~~i~~l~~~~~ 326 (359)
T PRK09922 315 VGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHhCcc
Confidence 999999998664
No 93
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.77 E-value=4.1e-17 Score=180.16 Aligned_cols=263 Identities=19% Similarity=0.187 Sum_probs=179.6
Q ss_pred HHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHH
Q 003024 191 QRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARH 270 (856)
Q Consensus 191 ~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~ 270 (856)
.++++..+| |+|++|.+..+.++.+...+..++++.+++|-.++....... +.. ..|.+-..+....+.
T Consensus 89 ~~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~~~~~------~~~---~~d~ii~~s~~~~~~ 157 (359)
T cd03823 89 ARLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPRQGL------FKK---GGDAVIAPSRFLLDR 157 (359)
T ss_pred HHHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecchhhh------hcc---CCCEEEEeCHHHHHH
Confidence 344555566 899999886554444333334468999999976543221111 111 127777777655554
Q ss_pred HHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCC
Q 003024 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKG 350 (856)
Q Consensus 271 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KG 350 (856)
|.. .+ ....++.++|+|+|...+..... ....++.+++++||+.+.||
T Consensus 158 ~~~-----~~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~ 205 (359)
T cd03823 158 YVA-----NG---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKG 205 (359)
T ss_pred HHH-----cC---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccC
Confidence 443 01 01236778999999877642110 11246788999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHH
Q 003024 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (856)
Q Consensus 351 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 430 (856)
+..+++|+..+.+ ++ +.|+.+|... .....+... +..+.+.+.+.++.+++..+|
T Consensus 206 ~~~li~~~~~l~~--~~----~~l~i~G~~~-----~~~~~~~~~--------------~~~~~v~~~g~~~~~~~~~~~ 260 (359)
T cd03823 206 VDLLLEAFKRLPR--GD----IELVIVGNGL-----ELEEESYEL--------------EGDPRVEFLGAYPQEEIDDFY 260 (359)
T ss_pred HHHHHHHHHHHHh--cC----cEEEEEcCch-----hhhHHHHhh--------------cCCCeEEEeCCCCHHHHHHHH
Confidence 9999999999876 44 4488777432 211111111 122356678899999999999
Q ss_pred Hhcceeeeccc-cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHH
Q 003024 431 TIAECVVVTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAM 506 (856)
Q Consensus 431 ~~ADv~vvtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai 506 (856)
+.||++++||. .||++++++|||+|+. |+|+|+.+|..+.+. .|+++++.|+++++++|
T Consensus 261 ~~ad~~i~ps~~~e~~~~~~~Ea~a~G~-----------------Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i 323 (359)
T cd03823 261 AEIDVLVVPSIWPENFPLVIREALAAGV-----------------PVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAAL 323 (359)
T ss_pred HhCCEEEEcCcccCCCChHHHHHHHCCC-----------------CEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHH
Confidence 99999999997 7999999999999954 999999999888884 48999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHH
Q 003024 507 HEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (856)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (856)
.++++ +++.++...++.++.+.. ..+++++++
T Consensus 324 ~~l~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 355 (359)
T cd03823 324 ERLID-DPDLLERLRAGIEPPRSI---EDQAEEYLK 355 (359)
T ss_pred HHHHh-ChHHHHHHHHhHHHhhhH---HHHHHHHHH
Confidence 99998 444455555555555443 444444443
No 94
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.77 E-value=1.5e-17 Score=175.34 Aligned_cols=189 Identities=13% Similarity=0.067 Sum_probs=128.5
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC-CccEEeeCCEEEEeCCCcc
Q 003024 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK-KLGIAAEHGYFMRWSADEE 669 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~-~lgliaenG~~I~~~~~~~ 669 (856)
.|+||+|+||||++ ++..+++.++++|++| ++.|+.|+++|||+..++..++..+. ..++|++||+.|..+..
T Consensus 1 ~KLIftDLDGTLLd---~~~~~~~~a~~aL~~L-k~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~-- 74 (302)
T PRK12702 1 MRLVLSSLDGSLLD---LEFNSYGAARQALAAL-ERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEH-- 74 (302)
T ss_pred CcEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccc--
Confidence 48999999999999 6777889999999997 88899999999999999999987764 34799999999997644
Q ss_pred eEe-----------------cCCCCcccHHHHHHHHHHHHhhcCC--------------cceEE------ecccceEEee
Q 003024 670 WQN-----------------CGQSVDFGWIQIAEPVMKLYTESTD--------------GSYIE------IKESALVWHH 712 (856)
Q Consensus 670 w~~-----------------~~~~~~~~w~~~v~~i~~~~~~~~~--------------Gs~ie------~k~~~l~~~~ 712 (856)
|.. .....-..|+..+.++-+.+..... |.-.+ .++++-.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w 154 (302)
T PRK12702 75 YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSY 154 (302)
T ss_pred cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEe
Confidence 220 0000011233333333222211111 11111 1122222222
Q ss_pred ecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEe------------------C---CCCHHHHHHHHHHHhhh
Q 003024 713 RDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKP------------------Q---GVSKGVVAEKIFTTMAE 771 (856)
Q Consensus 713 ~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p------------------~---gvsKG~al~~Ll~~l~~ 771 (856)
... ...+ .+.+...++.+..|..|+.+.. . +++||.|+++|.+.+..
T Consensus 155 ~~~--------~~~~----~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~ 222 (302)
T PRK12702 155 SGD--------PARL----REAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQR 222 (302)
T ss_pred cCC--------HHHH----HHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHh
Confidence 211 1122 4455666788889999998886 5 99999999999999843
Q ss_pred cCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 772 SGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 772 ~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
.. ..=.++++|||.||++||+++...
T Consensus 223 ~~-~~~~tiaLGDspND~~mLe~~D~~ 248 (302)
T PRK12702 223 HL-GPIKALGIGCSPPDLAFLRWSEQK 248 (302)
T ss_pred cc-CCceEEEecCChhhHHHHHhCCee
Confidence 32 233899999999999999999863
No 95
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.77 E-value=1.1e-17 Score=190.62 Aligned_cols=270 Identities=13% Similarity=0.079 Sum_probs=169.5
Q ss_pred HHHHcCCCCCEEEEeCcccchH---HHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHH
Q 003024 193 VIEVINPEDDYVWIHDYHLMVL---PTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYAR 269 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~ll---p~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~ 269 (856)
+++..+| |+|++|+.-.+.. ...+++++ .. +..+.|+.|+.+--+--.......+...+ ..|++
T Consensus 111 ~l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~~Y~~~~~~g~~~~~l~~~~---------~~~~~ 177 (462)
T PLN02846 111 TIPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYLEYVKREKNGRVKAFLLKYI---------NSWVV 177 (462)
T ss_pred HHHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChHHHHHHhccchHHHHHHHHH---------HHHHH
Confidence 3455677 8999998776655 33444454 34 77799998764321110001112222111 12222
Q ss_pred HHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc--CC--CeEEEeccCc
Q 003024 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EG--KTVLLGVDDM 345 (856)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~--k~iil~VdRl 345 (856)
.| .|+.++..+....+ +... +...+.|||.+.|.+... . +++.+ .+ .+++++||||
T Consensus 178 r~--~~d~vi~pS~~~~~------l~~~---~i~~v~GVd~~~f~~~~~-----~----~~~~~~~~~~~~~~~l~vGRL 237 (462)
T PLN02846 178 DI--YCHKVIRLSAATQD------YPRS---IICNVHGVNPKFLEIGKL-----K----LEQQKNGEQAFTKGAYYIGKM 237 (462)
T ss_pred HH--hcCEEEccCHHHHH------HhhC---EEecCceechhhcCCCcc-----c----HhhhcCCCCCcceEEEEEecC
Confidence 22 14544444321111 1111 222357999988763211 0 11222 12 3579999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHH
Q 003024 346 DIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSE 425 (856)
Q Consensus 346 d~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~e 425 (856)
.+.||+..+|+||.++.++.|+++ |+++| +|++.+++++.+.++ + .. ++++.|..+.+
T Consensus 238 ~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~~~a~~l----~-------l~-~~vf~G~~~~~- 295 (462)
T PLN02846 238 VWSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVKAAAEKL----E-------LD-VRVYPGRDHAD- 295 (462)
T ss_pred cccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHHHHHHhc----C-------Cc-EEEECCCCCHH-
Confidence 999999999999999988888754 77665 677766665554443 2 22 33466655444
Q ss_pred HHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHH
Q 003024 426 RAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEAT 502 (856)
Q Consensus 426 l~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~ 502 (856)
++|+.+||||+||..||||+|.+|||||+. |+|+++..| .+.+. +|+.+ .|.+++
T Consensus 296 --~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~-----------------PVVa~~~~~-~~~v~~~~ng~~~--~~~~~~ 353 (462)
T PLN02846 296 --PLFHDYKVFLNPSTTDVVCTTTAEALAMGK-----------------IVVCANHPS-NEFFKQFPNCRTY--DDGKGF 353 (462)
T ss_pred --HHHHhCCEEEECCCcccchHHHHHHHHcCC-----------------cEEEecCCC-cceeecCCceEec--CCHHHH
Confidence 689999999999999999999999999955 999999887 46662 36666 489999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Q 003024 503 AEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (856)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (856)
+++|.++|+.++.+... +. ...+++..-+++|++.++
T Consensus 354 a~ai~~~l~~~~~~~~~---~a---~~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 354 VRATLKALAEEPAPLTD---AQ---RHELSWEAATERFLRVAD 390 (462)
T ss_pred HHHHHHHHccCchhHHH---HH---HHhCCHHHHHHHHHHHhc
Confidence 99999999855433221 11 237788887887776554
No 96
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.76 E-value=4.9e-17 Score=178.55 Aligned_cols=278 Identities=17% Similarity=0.134 Sum_probs=189.6
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcC-CchHHH-HHHhHhCCEEcccCHHHHHH
Q 003024 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTL-PVREEI-LKALLNADLIGFHTFDYARH 270 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~l-p~r~ei-l~~ll~~dligf~t~~~~~~ 270 (856)
+++..+| |+|++|..+..++..++.+.....++.+..|...+........ .....+ -..+-.+|.+.+.+....+.
T Consensus 75 ~~~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 152 (359)
T cd03808 75 LLRKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDL 152 (359)
T ss_pred HHHhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHH
Confidence 3445566 8999998887777777766566677888888653321110000 000111 11233578888888777776
Q ss_pred HHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCC
Q 003024 271 FLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKG 350 (856)
Q Consensus 271 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KG 350 (856)
+.+. +.. .....+.+.|+|+|...+..... . ...++..++++||+.+.||
T Consensus 153 ~~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~i~~~G~~~~~k~ 202 (359)
T cd03808 153 ALKL-----GII-------------KKKKTVLIPGSGVDLDRFSPSPE-----P-------IPEDDPVFLFVARLLKDKG 202 (359)
T ss_pred HHHh-----cCC-------------CcCceEEecCCCCChhhcCcccc-----c-------cCCCCcEEEEEeccccccC
Confidence 6541 100 01234566799999877642211 0 1246789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHH
Q 003024 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (856)
Q Consensus 351 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 430 (856)
+..+++|++.+.+++|+++ |+.+|.... . ...... ++.+. +..+.+.+.+. .+++..+|
T Consensus 203 ~~~li~~~~~l~~~~~~~~----l~i~G~~~~---~--~~~~~~---~~~~~-------~~~~~v~~~g~--~~~~~~~~ 261 (359)
T cd03808 203 IDELLEAARILKAKGPNVR----LLLVGDGDE---E--NPAAIL---EIEKL-------GLEGRVEFLGF--RDDVPELL 261 (359)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEcCCCc---c--hhhHHH---HHHhc-------CCcceEEEeec--cccHHHHH
Confidence 9999999999988787654 777775431 1 111111 12221 12234445555 67899999
Q ss_pred HhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHH
Q 003024 431 TIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMH 507 (856)
Q Consensus 431 ~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~ 507 (856)
+.||++++||..||+|++++|||+|+. |+|+|+.+|..+.+. .|+++++.|+++++++|.
T Consensus 262 ~~adi~i~ps~~e~~~~~~~Ea~~~G~-----------------Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~ 324 (359)
T cd03808 262 AAADVFVLPSYREGLPRVLLEAMAMGR-----------------PVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIE 324 (359)
T ss_pred HhccEEEecCcccCcchHHHHHHHcCC-----------------CEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHH
Confidence 999999999999999999999999955 999999999998884 389999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhhh-hhcCCHHHHHHHHH
Q 003024 508 EAIQMNEAEKQLRHEKHYRY-VSTHDVAYWARSFF 541 (856)
Q Consensus 508 ~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 541 (856)
+++..+ +.+....++.+++ ...++...+++.++
T Consensus 325 ~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 325 RLIEDP-ELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 988644 4444555566666 56788888887764
No 97
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.75 E-value=3e-18 Score=181.88 Aligned_cols=193 Identities=20% Similarity=0.284 Sum_probs=121.4
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCC---CccEEeeCCEEEEeCCC
Q 003024 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCK---KLGIAAEHGYFMRWSAD 667 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~---~lgliaenG~~I~~~~~ 667 (856)
.++|++|+||||++ .+..-.++..+.++ ....+++.++++|||+..++.+.+...+ .-.+|+.+|..|+....
T Consensus 2 ~~ll~sDlD~Tl~~---~~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~ 77 (247)
T PF05116_consen 2 PRLLASDLDGTLID---GDDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGEN 77 (247)
T ss_dssp SEEEEEETBTTTBH---CHHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESST
T ss_pred CEEEEEECCCCCcC---CCHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCC
Confidence 58999999999993 12222344455555 2357899999999999999998886532 23588999999988321
Q ss_pred ----cceEecCCCCcccHHH-HHHHHHHHHhhcCCcce----EEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCC
Q 003024 668 ----EEWQNCGQSVDFGWIQ-IAEPVMKLYTESTDGSY----IEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE 738 (856)
Q Consensus 668 ----~~w~~~~~~~~~~w~~-~v~~i~~~~~~~~~Gs~----ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~ 738 (856)
..|...+ ...|.. .+.+++ ...++.. .+.....+.+.+...+. ...++.|+..+...
T Consensus 78 ~~~d~~w~~~i---~~~w~~~~v~~~l----~~~~~l~~q~~~~q~~~k~sy~~~~~~~-------~~~~~~i~~~l~~~ 143 (247)
T PF05116_consen 78 WQPDEEWQAHI---DERWDRERVEEIL----AELPGLRPQPESEQRPFKISYYVDPDDS-------ADILEEIRARLRQR 143 (247)
T ss_dssp TEE-HHHHHHH---HTT--HHHHHHHH----HCHCCEEEGGCCCGCCTCECEEEETTSH-------CHHHHHHHHHHHCC
T ss_pred CcChHHHHHHH---HhcCChHHHHHHH----HHhhCcccCCccccCCeeEEEEEecccc-------hhHHHHHHHHHHHc
Confidence 1232211 112332 222233 3333322 22233445555443221 23344555555444
Q ss_pred C---eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEe
Q 003024 739 P---AAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTV 815 (856)
Q Consensus 739 ~---~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v 815 (856)
. ..+.++..+++|.|+++|||.|+++|++++ ++++++|+++|||.||++||.... .+|.|
T Consensus 144 ~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~---~~~~~~vl~aGDSgND~~mL~~~~--------------~~vvV 206 (247)
T PF05116_consen 144 GLRVNVIYSNGRDLDILPKGASKGAALRYLMERW---GIPPEQVLVAGDSGNDLEMLEGGD--------------HGVVV 206 (247)
T ss_dssp TCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHH---T--GGGEEEEESSGGGHHHHCCSS--------------EEEE-
T ss_pred CCCeeEEEccceeEEEccCCCCHHHHHHHHHHHh---CCCHHHEEEEeCCCCcHHHHcCcC--------------CEEEE
Confidence 3 245578899999999999999999999999 999999999999999999995443 57899
Q ss_pred CCC
Q 003024 816 GQK 818 (856)
Q Consensus 816 G~~ 818 (856)
||+
T Consensus 207 ~Na 209 (247)
T PF05116_consen 207 GNA 209 (247)
T ss_dssp TTS
T ss_pred cCC
Confidence 986
No 98
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.75 E-value=6.4e-17 Score=185.31 Aligned_cols=164 Identities=11% Similarity=0.084 Sum_probs=125.7
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHh------CCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 003024 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ------HPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGR 408 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi~~~l~A~~~ll~~------~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~ 408 (856)
+..++++++|+.+.||+..+++|+..+.+. +|+ +.|+++|. |+..+++++.++++
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~----i~l~ivG~-----G~~~~~l~~~~~~~---------- 291 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPK----LLCIITGK-----GPLKEKYLERIKEL---------- 291 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCC----EEEEEEec-----CccHHHHHHHHHHc----------
Confidence 356888999999999999999999998764 344 55888873 44444444444432
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhcceeeec---cccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccc
Q 003024 409 PGYEPVVFIDKPVTLSERAAYYTIAECVVVT---AVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS 485 (856)
Q Consensus 409 ~~~~pvv~~~~~v~~~el~aly~~ADv~vvt---S~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (856)
+...++++.+.++.+++..+|++||++|++ +..+||+++.+|||||+. |+|+|..+|+.
T Consensus 292 -~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~-----------------PVI~s~~~~~~ 353 (415)
T cd03816 292 -KLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGL-----------------PVCALDFKCID 353 (415)
T ss_pred -CCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCC-----------------CEEEeCCCCHH
Confidence 445688888889999999999999999864 335889999999999955 99999999988
Q ss_pred cccC---CceeeCCCCHHHHHHHHHHHHcCC--HHHHHHHHHHHhhhhhcCCHHHHHHHHH
Q 003024 486 PSLS---GAIRVNPWNIEATAEAMHEAIQMN--EAEKQLRHEKHYRYVSTHDVAYWARSFF 541 (856)
Q Consensus 486 ~~l~---~al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~~l 541 (856)
+.+. +|++|+ |++++|++|.++++.+ +++++.+.++.+++.. .+|...+.
T Consensus 354 eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~ 408 (415)
T cd03816 354 ELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWD 408 (415)
T ss_pred HHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHH
Confidence 8883 488884 9999999999999872 5666666666666554 34555443
No 99
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.75 E-value=3.3e-17 Score=188.76 Aligned_cols=319 Identities=12% Similarity=0.117 Sum_probs=185.9
Q ss_pred eeCChhhhhhHhhcccccccc--ccccccCCCCCCCCCCcChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchH
Q 003024 137 AFLPPDILTKFYHGFCKQHLW--PLFHYMLPFSATHGGRFDRSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVL 214 (856)
Q Consensus 137 v~l~~~~~~~~y~gf~~~~lW--pl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~ll 214 (856)
+|=++++++.|......+-.= |.|-.. ++| ++|..+.-. -.-+-... +.+...+| |+|++|..-.+..
T Consensus 379 ~F~~p~eQe~~ir~wl~~r~g~~~~~~i~--fYp---g~~~~~~~S-I~p~gdI~--~~L~~f~P--DVVHLatP~~LGw 448 (794)
T PLN02501 379 TFSSPEEQESYIRNWLEERIGFKADFKIS--FYP---GKFSKERRS-IIPAGDTS--QFIPSKDA--DIAILEEPEHLNW 448 (794)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCceEE--eec---chhccCCcc-ccchHHHH--HHhhccCC--CEEEECCchhhcc
Confidence 677888888877766532111 111111 222 344322111 11111111 12334456 8999997654433
Q ss_pred H---HHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHH--HHhhhCceecccCce
Q 003024 215 P---TFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSC--CSRMLGLEYQSKRGY 289 (856)
Q Consensus 215 p---~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~--~~r~lg~~~~~~~~~ 289 (856)
- ....+++. ++....|+.||.+--+.-+..-+.++. .++++|+.. |++++.++.....
T Consensus 449 ~~~Glr~ArKl~--PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~v~r~hcD~VIaPS~atq~-- 511 (794)
T PLN02501 449 YHHGKRWTDKFN--HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNWVTRAYCHKVLRLSAATQD-- 511 (794)
T ss_pred HHHHHHHHHHcC--CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHHHHHhhCCEEEcCCHHHHH--
Confidence 3 23334443 699999999996433322222222111 133344433 6776665522211
Q ss_pred eeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCc
Q 003024 290 IGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQ 369 (856)
Q Consensus 290 ~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~ 369 (856)
+. +. .|.. ..|||++.|.+... .. ...++ ......+.+++||||.+.||+..+|+|+..+.++.|+++
T Consensus 512 ----L~-~~-vI~n-VnGVDte~F~P~~r---~~-~~r~l-gi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvr 579 (794)
T PLN02501 512 ----LP-KS-VICN-VHGVNPKFLKIGEK---VA-EEREL-GQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFN 579 (794)
T ss_pred ----hc-cc-ceee-cccccccccCCcch---hH-HHHhc-CCccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeE
Confidence 11 11 1111 15999998864321 11 11111 000122458999999999999999999999988888754
Q ss_pred CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcc
Q 003024 370 GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTP 449 (856)
Q Consensus 370 ~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~ 449 (856)
|+++| +|++.+++++.+. +.+ . .+. |.+.. ++..++|+.+||||+||.+||||+|+
T Consensus 580 ----LvIVG-----DGP~reeLe~la~----eLg-------L-~V~-FLG~~--dd~~~lyasaDVFVlPS~sEgFGlVl 635 (794)
T PLN02501 580 ----LDVFG-----NGEDAHEVQRAAK----RLD-------L-NLN-FLKGR--DHADDSLHGYKVFINPSISDVLCTAT 635 (794)
T ss_pred ----EEEEc-----CCccHHHHHHHHH----HcC-------C-EEE-ecCCC--CCHHHHHHhCCEEEECCCcccchHHH
Confidence 77776 5566555544443 322 2 144 44443 33458999999999999999999999
Q ss_pred cceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-C--CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Q 003024 450 YEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-S--GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYR 526 (856)
Q Consensus 450 ~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 526 (856)
+|||||+. |||+++..|... + . ++++ +.|.++++++|.++|..++. + ...+.
T Consensus 636 LEAMA~Gl-----------------PVVATd~pG~e~-V~~g~nGll--~~D~EafAeAI~~LLsd~~~-r-l~~~a--- 690 (794)
T PLN02501 636 AEALAMGK-----------------FVVCADHPSNEF-FRSFPNCLT--YKTSEDFVAKVKEALANEPQ-P-LTPEQ--- 690 (794)
T ss_pred HHHHHcCC-----------------CEEEecCCCCce-EeecCCeEe--cCCHHHHHHHHHHHHhCchh-h-hHHHH---
Confidence 99999955 999999988543 4 2 3443 47999999999999987652 2 22221
Q ss_pred hhhcCCHHHHHHHHHHHH
Q 003024 527 YVSTHDVAYWARSFFQDM 544 (856)
Q Consensus 527 ~v~~~~~~~W~~~~l~~l 544 (856)
...+++..-++++++..
T Consensus 691 -~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 691 -RYNLSWEAATQRFMEYS 707 (794)
T ss_pred -HhhCCHHHHHHHHHHhh
Confidence 23667777777666543
No 100
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.74 E-value=1.3e-16 Score=177.34 Aligned_cols=258 Identities=17% Similarity=0.176 Sum_probs=174.3
Q ss_pred CEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHH-HHHhHhCCEEcccCHHHHHHHHHHHHhhhC
Q 003024 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEI-LKALLNADLIGFHTFDYARHFLSCCSRMLG 280 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~ei-l~~ll~~dligf~t~~~~~~Fl~~~~r~lg 280 (856)
|+|++|+...+.....+... .+.+..+++|........+. .....+ -..+..||.|.+.+..+.+.+.. . +
T Consensus 85 Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~----~-~ 156 (357)
T cd03795 85 DVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV----L-R 156 (357)
T ss_pred CEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----h-c
Confidence 89999986654332222222 56788899996432221110 111111 22455678887777665554432 0 0
Q ss_pred ceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHH
Q 003024 281 LEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEH 360 (856)
Q Consensus 281 ~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ 360 (856)
....++.++|+|+|...+.... .. . ........++.+|+++||+.+.||+..+++|+++
T Consensus 157 ---------------~~~~~~~~i~~gi~~~~~~~~~---~~--~-~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~ 215 (357)
T cd03795 157 ---------------RFRDKVRVIPLGLDPARYPRPD---AL--E-EAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAA 215 (357)
T ss_pred ---------------CCccceEEecCCCChhhcCCcc---hh--h-hHhhcCCCCCcEEEEecccccccCHHHHHHHHHh
Confidence 0113567789999988764211 10 0 1111122467899999999999999999999988
Q ss_pred HHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeecc
Q 003024 361 LLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTA 440 (856)
Q Consensus 361 ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS 440 (856)
+. ++.|+.+|. ++.... +.+++.+. +..+-+.+.|.++.+++..+|+.||++++||
T Consensus 216 l~--------~~~l~i~G~-----g~~~~~----~~~~~~~~-------~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps 271 (357)
T cd03795 216 LP--------DAPLVIVGE-----GPLEAE----LEALAAAL-------GLLDRVRFLGRLDDEEKAALLAACDVFVFPS 271 (357)
T ss_pred cc--------CcEEEEEeC-----ChhHHH----HHHHHHhc-------CCcceEEEcCCCCHHHHHHHHHhCCEEEeCC
Confidence 74 466887774 333333 33333222 3345667788999999999999999999999
Q ss_pred c--cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC----CceeeCCCCHHHHHHHHHHHHcCCH
Q 003024 441 V--RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS----GAIRVNPWNIEATAEAMHEAIQMNE 514 (856)
Q Consensus 441 ~--~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~----~al~VnP~d~~~~A~ai~~aL~m~~ 514 (856)
. .||+|++.+|||+|+. |+|+|+.+|..+.+. .|++++|.|+++++++|.++++. +
T Consensus 272 ~~~~e~~g~~~~Ea~~~g~-----------------Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~-~ 333 (357)
T cd03795 272 VERSEAFGIVLLEAMAFGK-----------------PVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLED-P 333 (357)
T ss_pred cccccccchHHHHHHHcCC-----------------CEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHC-H
Confidence 6 5999999999999955 999999999887763 38899999999999999999984 4
Q ss_pred HHHHHHHHHHhhhhhc
Q 003024 515 AEKQLRHEKHYRYVST 530 (856)
Q Consensus 515 ~er~~r~~~~~~~v~~ 530 (856)
++++...++.++++.+
T Consensus 334 ~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 334 ELRERLGEAARERAEE 349 (357)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555556666666644
No 101
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.73 E-value=5.4e-16 Score=176.65 Aligned_cols=189 Identities=15% Similarity=0.136 Sum_probs=136.6
Q ss_pred EEEEeecccCchHHHHHhcCchHHHHHHHHHHHc-CCCeEEEeccCccccCCHHHHH----HHHHHHHHhCCCCcCceEE
Q 003024 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMDIFKGVDLKL----LAMEHLLKQHPKWQGRAVL 374 (856)
Q Consensus 300 ~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~k~iil~VdRld~~KGi~~~l----~A~~~ll~~~p~~~~~vvL 374 (856)
++.++|+|||.+.|.+.... ...+ .++++|+++||+++.||+..++ .++..+.+++|+++ |
T Consensus 197 ~v~vipngvd~~~f~~~~~~----------~~~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l 262 (397)
T TIGR03087 197 RITAFPNGVDADFFSPDRDY----------PNPYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----F 262 (397)
T ss_pred CeEEeecccchhhcCCCccc----------cCCCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----E
Confidence 56778999999887532110 0111 3567899999999999999887 56667777888765 8
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccc-cccCCCccccee
Q 003024 375 VQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAV-RDGMNLTPYEYI 453 (856)
Q Consensus 375 vqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~-~EG~nLv~~Ea~ 453 (856)
+++|. ++. . +++++.. .+-+.+.|.++ ++..+|+.||++|+||. .||++++.+|||
T Consensus 263 ~ivG~-----g~~-~----~~~~l~~-----------~~~V~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAm 319 (397)
T TIGR03087 263 YIVGA-----KPS-P----AVRALAA-----------LPGVTVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAM 319 (397)
T ss_pred EEECC-----CCh-H----HHHHhcc-----------CCCeEEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHH
Confidence 87774 222 1 2222211 12244667776 68999999999999996 699999999999
Q ss_pred eeecCCCCCCCCCCCCCCCCceEEecCCccccccc--CCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hc
Q 003024 454 VCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL--SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-ST 530 (856)
Q Consensus 454 a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~ 530 (856)
||+. |+|+|..++..... ..|+++. .|++++|++|.++++. ++.++...++.++++ ..
T Consensus 320 a~G~-----------------PVV~t~~~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~-~~~~~~~~~~ar~~v~~~ 380 (397)
T TIGR03087 320 AMAK-----------------PVVASPEAAEGIDALPGAELLVA-ADPADFAAAILALLAN-PAEREELGQAARRRVLQH 380 (397)
T ss_pred HcCC-----------------CEEecCcccccccccCCcceEeC-CCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHh
Confidence 9955 99999864322111 2478885 8999999999999974 455666667778877 46
Q ss_pred CCHHHHHHHHHHHH
Q 003024 531 HDVAYWARSFFQDM 544 (856)
Q Consensus 531 ~~~~~W~~~~l~~l 544 (856)
+++...++++.+-+
T Consensus 381 fsw~~~~~~~~~~l 394 (397)
T TIGR03087 381 YHWPRNLARLDALL 394 (397)
T ss_pred CCHHHHHHHHHHHh
Confidence 89998888876654
No 102
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.72 E-value=1.9e-16 Score=173.11 Aligned_cols=247 Identities=21% Similarity=0.164 Sum_probs=166.1
Q ss_pred HHcCCCCCEEEEeCc-ccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHH
Q 003024 195 EVINPEDDYVWIHDY-HLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLS 273 (856)
Q Consensus 195 ~~~~~~~D~VwihDy-hl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~ 273 (856)
+..++ |+|++|++ ...++. .+..+. +.++.+.+|..++...... .+........+..+|.+-+.+....+.+.+
T Consensus 78 ~~~~~--dii~~~~~~~~~~~~-~~~~~~-~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 152 (353)
T cd03811 78 RKEKP--DVVISHLTTTPNVLA-LLAARL-GTKLIVWEHNSLSLELKRK-LRLLLLIRKLYRRADKIVAVSEGVKEDLLK 152 (353)
T ss_pred HhcCC--CEEEEcCccchhHHH-HHHhhc-CCceEEEEcCcchhhhccc-hhHHHHHHhhccccceEEEeccchhhhHHH
Confidence 33466 99999998 333443 344433 7899999998876532211 111112334455688888777665555543
Q ss_pred HHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHH
Q 003024 274 CCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDL 353 (856)
Q Consensus 274 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~ 353 (856)
.. + ....++.++|+|+|...+...... .. ......++.+++++||+++.||+..
T Consensus 153 ~~----~---------------~~~~~~~vi~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~i~~~g~~~~~k~~~~ 206 (353)
T cd03811 153 LL----G---------------IPPDKIEVIYNPIDIEEIRALAEE-----PL--ELGIPPDGPVILAVGRLSPQKGFDT 206 (353)
T ss_pred hh----c---------------CCccccEEecCCcChhhcCcccch-----hh--hcCCCCCceEEEEEecchhhcChHH
Confidence 11 1 012456778999998776532110 00 0011256789999999999999999
Q ss_pred HHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q 003024 354 KLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIA 433 (856)
Q Consensus 354 ~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~A 433 (856)
.++|++.+.+++++++ |+.+|. ++...+++ +++.+.+ ..+.+.+.+.+ +++..+|+.|
T Consensus 207 ~i~~~~~l~~~~~~~~----l~i~G~-----~~~~~~~~----~~~~~~~-------~~~~v~~~g~~--~~~~~~~~~~ 264 (353)
T cd03811 207 LIRAFALLRKEGPDAR----LVILGD-----GPLREELE----ALAKELG-------LADRVHFLGFQ--SNPYPYLKAA 264 (353)
T ss_pred HHHHHHHhhhcCCCce----EEEEcC-----CccHHHHH----HHHHhcC-------CCccEEEeccc--CCHHHHHHhC
Confidence 9999999988776654 777774 23333333 3333332 23344555553 4688999999
Q ss_pred ceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHH
Q 003024 434 ECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAI 510 (856)
Q Consensus 434 Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL 510 (856)
|+++.||..||+|++++|||+|+. |+|+|+.+|..+.+. .|+++++.|.+++++++..+.
T Consensus 265 d~~i~ps~~e~~~~~~~Ea~~~G~-----------------PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~ 327 (353)
T cd03811 265 DLFVLSSRYEGFPNVLLEAMALGT-----------------PVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALL 327 (353)
T ss_pred CEEEeCcccCCCCcHHHHHHHhCC-----------------CEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHH
Confidence 999999999999999999999955 999999999988883 489999999999954444444
Q ss_pred c
Q 003024 511 Q 511 (856)
Q Consensus 511 ~ 511 (856)
.
T Consensus 328 ~ 328 (353)
T cd03811 328 D 328 (353)
T ss_pred h
Confidence 3
No 103
>PHA01630 putative group 1 glycosyl transferase
Probab=99.71 E-value=2.5e-16 Score=174.39 Aligned_cols=186 Identities=13% Similarity=0.115 Sum_probs=136.3
Q ss_pred EEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEec
Q 003024 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIAN 379 (856)
Q Consensus 300 ~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~ 379 (856)
++.++|+|||.+.|.+... ...++.++++++|+.+.||+..+++|++++.+++|+++ |+.+|.
T Consensus 119 ~i~vIpNGVd~~~f~~~~~-------------~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~ 181 (331)
T PHA01630 119 PIYVIPHNLNPRMFEYKPK-------------EKPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSS 181 (331)
T ss_pred CEEEECCCCCHHHcCCCcc-------------ccCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeC
Confidence 5678899999887742110 01345567777899999999999999999998887654 777772
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCC
Q 003024 380 PARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGV 459 (856)
Q Consensus 380 p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~ 459 (856)
. .. +. ++. + + .+ +.+.++.+++..+|+.||+||+||..||||++++|||||+.
T Consensus 182 ~-----~~--~~--~l~------~--~--~~------~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-- 234 (331)
T PHA01630 182 N-----ML--DP--RLF------G--L--NG------VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-- 234 (331)
T ss_pred c-----cc--ch--hhc------c--c--cc------eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCC--
Confidence 1 11 11 110 1 0 01 23468899999999999999999999999999999999955
Q ss_pred CCCCCCCCCCCCCCceEEecCCcccccccCC-----------------------ceeeCCCCHHHHHHHHHHHHcCC-HH
Q 003024 460 SGSESSSESSAPKKSMLVVSEFIGCSPSLSG-----------------------AIRVNPWNIEATAEAMHEAIQMN-EA 515 (856)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~-----------------------al~VnP~d~~~~A~ai~~aL~m~-~~ 515 (856)
|+|+|+.+|..+.+.+ |++++| |.+++++++.++|..+ ++
T Consensus 235 ---------------PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~ 298 (331)
T PHA01630 235 ---------------DVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWTPE 298 (331)
T ss_pred ---------------CEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCCHH
Confidence 9999999888887732 444555 7888999999999764 23
Q ss_pred HHHHHH-HHHhhhhhcCCHHHHHHHHHHHHH
Q 003024 516 EKQLRH-EKHYRYVSTHDVAYWARSFFQDME 545 (856)
Q Consensus 516 er~~r~-~~~~~~v~~~~~~~W~~~~l~~l~ 545 (856)
+++.+. .......+.+++...++++++-++
T Consensus 299 ~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 299 KKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 333333 344556778999999998887764
No 104
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.71 E-value=5e-16 Score=173.51 Aligned_cols=245 Identities=16% Similarity=0.156 Sum_probs=161.9
Q ss_pred CCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCC----ChHHH-hcCCc-------------hHHHHHHhHhCCEEcc
Q 003024 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFP----SSEIY-RTLPV-------------REEILKALLNADLIGF 262 (856)
Q Consensus 201 ~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~e~~-~~lp~-------------r~eil~~ll~~dligf 262 (856)
.|+|+++...+. ...+ +.++.+..+++|.|.+ ..+.+ ...+. +.-..+.+-.+|.|..
T Consensus 84 ~D~v~~~~~~~~--~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 159 (351)
T cd03804 84 YDLVISSSHAVA--KGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFIA 159 (351)
T ss_pred CCEEEEcCcHHh--cccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 489977643222 2222 4567888889998631 11111 11110 0011223456677776
Q ss_pred cCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEec
Q 003024 263 HTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGV 342 (856)
Q Consensus 263 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~V 342 (856)
.+....+.+.+. . +. ...++|+|+|.+.|.... ..+++++++
T Consensus 160 ~S~~~~~~~~~~----~----------------~~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~~ 201 (351)
T cd03804 160 NSRFVARRIKKY----Y----------------GR--DATVIYPPVDTDRFTPAE----------------EKEDYYLSV 201 (351)
T ss_pred CCHHHHHHHHHH----h----------------CC--CcEEECCCCCHhhcCcCC----------------CCCCEEEEE
Confidence 666555544321 1 11 124678999987764210 234579999
Q ss_pred cCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCC
Q 003024 343 DDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVT 422 (856)
Q Consensus 343 dRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~ 422 (856)
||+.+.||+..+++|++++ | + .|+.+|. |++.+++++ . ..+.+.+.|.++
T Consensus 202 G~~~~~K~~~~li~a~~~~----~-~----~l~ivG~-----g~~~~~l~~-------~---------~~~~V~~~g~~~ 251 (351)
T cd03804 202 GRLVPYKRIDLAIEAFNKL----G-K----RLVVIGD-----GPELDRLRA-------K---------AGPNVTFLGRVS 251 (351)
T ss_pred EcCccccChHHHHHHHHHC----C-C----cEEEEEC-----ChhHHHHHh-------h---------cCCCEEEecCCC
Confidence 9999999999999999875 3 3 3777773 344333332 0 112455678999
Q ss_pred HHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCH
Q 003024 423 LSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNI 499 (856)
Q Consensus 423 ~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~ 499 (856)
.+++.++|+.||++++||. ||||++++|||+|+. |+|+|..+|..+.+. .|++++|.|+
T Consensus 252 ~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~-----------------Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 252 DEELRDLYARARAFLFPAE-EDFGIVPVEAMASGT-----------------PVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred HHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCC-----------------CEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 9999999999999999999 999999999999955 999999999888773 4899999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHH
Q 003024 500 EATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARS 539 (856)
Q Consensus 500 ~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 539 (856)
+++|++|..+++.++.. .+.+++....+++.+..++
T Consensus 314 ~~la~~i~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 314 ESLAAAVERFEKNEDFD----PQAIRAHAERFSESRFREK 349 (351)
T ss_pred HHHHHHHHHHHhCcccC----HHHHHHHHHhcCHHHHHHH
Confidence 99999999999876421 2233444455555555443
No 105
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.71 E-value=9.1e-16 Score=171.05 Aligned_cols=267 Identities=14% Similarity=0.037 Sum_probs=171.9
Q ss_pred CEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHH-----HHhHhCCEEcccCHHHHHHHHHHHH
Q 003024 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEIL-----KALLNADLIGFHTFDYARHFLSCCS 276 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil-----~~ll~~dligf~t~~~~~~Fl~~~~ 276 (856)
|+++||.......+....-+..+.++.+.+|..-.....+.. ....++ ..+-.+|.|-..+....+.+..
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~--- 160 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRLKGKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKE--- 160 (363)
T ss_pred CeEEEEecCccHHHHHHHHHhcCCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH---
Confidence 566666554443333222222378899988852111111110 011111 1344678887777544443322
Q ss_pred hhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHH--cCCCeEEEeccCccccCCHHHH
Q 003024 277 RMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQ--FEGKTVLLGVDDMDIFKGVDLK 354 (856)
Q Consensus 277 r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~--~~~k~iil~VdRld~~KGi~~~ 354 (856)
..| ... .++|+|+|...+.. ....++. ...++.++++||+.+.||+..+
T Consensus 161 -~~~----------------~~~--~~i~ngv~~~~~~~----------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 161 -KYG----------------RDS--TYIPYGADHVVSSE----------EDEILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred -hcC----------------CCC--eeeCCCcChhhcch----------hhhhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 111 111 57899999876532 0111222 2345678899999999999999
Q ss_pred HHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 003024 355 LLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAE 434 (856)
Q Consensus 355 l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 434 (856)
++|+.++.. ++.|+.+|... +..++.+++.+. . +..+.+.+.|.++.+++..+|+.||
T Consensus 212 i~a~~~l~~-------~~~l~ivG~~~-----~~~~~~~~~~~~-------~---~~~~~V~~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS-------GKKLVIVGNAD-----HNTPYGKLLKEK-------A---AADPRIIFVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc-------CceEEEEcCCC-----CcchHHHHHHHH-------h---CCCCcEEEccccChHHHHHHHHhCC
Confidence 999987632 35588888542 112333333321 1 1234566788999999999999999
Q ss_pred eeeecccc-ccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-CCceeeCCCCHHHHHHHHHHHHcC
Q 003024 435 CVVVTAVR-DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIEATAEAMHEAIQM 512 (856)
Q Consensus 435 v~vvtS~~-EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m 512 (856)
++++||.. ||||++++|||+|+. |+|+|..+|..+.+ .+|..++|.|. +|++|.++++.
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~G~-----------------PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~ 330 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAYGC-----------------PVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEAD 330 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHcCC-----------------CEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhC
Confidence 99999999 999999999999955 99999999888877 45888888776 99999999986
Q ss_pred CHHHHHHHHHHHhhhhh-cCCHHHHHHHHHHHH
Q 003024 513 NEAEKQLRHEKHYRYVS-THDVAYWARSFFQDM 544 (856)
Q Consensus 513 ~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l 544 (856)
++ .+....++.++.+. .+++..-++++++.+
T Consensus 331 ~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 331 PE-EVSAMAKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 63 34444455566665 488888888776543
No 106
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.70 E-value=1e-15 Score=168.74 Aligned_cols=246 Identities=16% Similarity=0.089 Sum_probs=164.4
Q ss_pred HHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHH
Q 003024 193 VIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFL 272 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl 272 (856)
+++..++ |+|++|+....++ + .+..+.++.+.+|..++..... ........+.+-+-+....+.+.
T Consensus 82 ~~~~~~~--Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~~--------~~~~~~~~~~~~~~s~~~~~~~~ 147 (335)
T cd03802 82 ALAAGDF--DIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELLK--------LYYAARPDVPFVSISDAQRRPWP 147 (335)
T ss_pred HHhcCCC--CEEEecCcccchh---h-hcccCCCEEEEecCCCCcccch--------HHHhhCcCCeEEEecHHHHhhcc
Confidence 3444555 8999999888776 2 3345788999999876532111 22233333433322222111110
Q ss_pred HHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHH
Q 003024 273 SCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVD 352 (856)
Q Consensus 273 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~ 352 (856)
.. .++.++|+|||.+.|.. ...++.+++++||+.+.||+.
T Consensus 148 -----------------------~~-~~~~vi~ngvd~~~~~~----------------~~~~~~~i~~~Gr~~~~Kg~~ 187 (335)
T cd03802 148 -----------------------PL-PWVATVHNGIDLDDYPF----------------RGPKGDYLLFLGRISPEKGPH 187 (335)
T ss_pred -----------------------cc-cccEEecCCcChhhCCC----------------CCCCCCEEEEEEeeccccCHH
Confidence 00 35678899999987742 013467899999999999999
Q ss_pred HHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 003024 353 LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI 432 (856)
Q Consensus 353 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ 432 (856)
.+++|+++ ++ +.|+++|... ....+...+.+... ..+.+.+.|.++.+++..+|+.
T Consensus 188 ~li~~~~~-----~~----~~l~i~G~~~-----~~~~~~~~~~~~~~----------~~~~v~~~G~~~~~~~~~~~~~ 243 (335)
T cd03802 188 LAIRAARR-----AG----IPLKLAGPVS-----DPDYFYREIAPELL----------DGPDIEYLGEVGGAEKAELLGN 243 (335)
T ss_pred HHHHHHHh-----cC----CeEEEEeCCC-----CHHHHHHHHHHhcc----------cCCcEEEeCCCCHHHHHHHHHh
Confidence 99998754 33 4477777532 21222222222210 1234567789999999999999
Q ss_pred cceeeeccc-cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHH
Q 003024 433 AECVVVTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHE 508 (856)
Q Consensus 433 ADv~vvtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~ 508 (856)
||++++||. .||||++++|||+|+. |+|+|+.+|..+.+. +|+++++ +++++++|.+
T Consensus 244 ~d~~v~ps~~~E~~~~~~lEAma~G~-----------------PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~ 304 (335)
T cd03802 244 ARALLFPILWEEPFGLVMIEAMACGT-----------------PVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVAR 304 (335)
T ss_pred CcEEEeCCcccCCcchHHHHHHhcCC-----------------CEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHH
Confidence 999999997 5999999999999954 999999999998883 4889987 9999999999
Q ss_pred HHcCCHHHHHHHHHHHhhh-hhcCCHHHHHHHHHH
Q 003024 509 AIQMNEAEKQLRHEKHYRY-VSTHDVAYWARSFFQ 542 (856)
Q Consensus 509 aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~ 542 (856)
++..+... .++. ...+++..-++++++
T Consensus 305 l~~~~~~~-------~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 305 ADRLDRAA-------CRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred HhccHHHH-------HHHHHHHhCCHHHHHHHHHH
Confidence 87654221 1222 255677666666654
No 107
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.68 E-value=1.2e-15 Score=170.09 Aligned_cols=194 Identities=18% Similarity=0.178 Sum_probs=141.9
Q ss_pred EEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccc--cCCHHHHHHHHHHHHHh-CCCCcCce
Q 003024 299 VGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDI--FKGVDLKLLAMEHLLKQ-HPKWQGRA 372 (856)
Q Consensus 299 ~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~--~KGi~~~l~A~~~ll~~-~p~~~~~v 372 (856)
.++.++|+|||...+.+.. . ...++.+ .++.+++.+++... .||+..+++|++.+.++ .| ++
T Consensus 159 ~~~~vi~ngi~~~~~~~~~-----~---~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~----~~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRD-----K---REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKD----DI 226 (365)
T ss_pred CceEEeCCCCcccccCCCc-----H---HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCC----Ce
Confidence 3577899999988764211 1 1223333 34566666666654 89999999999988765 34 45
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCC-HHHHHHHHHhcceeeeccccccCCCcccc
Q 003024 373 VLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVT-LSERAAYYTIAECVVVTAVRDGMNLTPYE 451 (856)
Q Consensus 373 vLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~-~~el~aly~~ADv~vvtS~~EG~nLv~~E 451 (856)
.++.+|... .... . +....+.+.+.++ .+++..+|+.||+++.||..||||++++|
T Consensus 227 ~~~i~G~~~-----~~~~--~----------------~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEIP--P----------------DLPFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhhh--c----------------cCCCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 577777432 1000 0 1112345667787 88999999999999999999999999999
Q ss_pred eeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh
Q 003024 452 YIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV 528 (856)
Q Consensus 452 a~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 528 (856)
||+|+. |+|+|+.+|..+.+. .|+++++.|++++|++|.++++.+ +++....++.++++
T Consensus 284 am~~g~-----------------PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~ 345 (365)
T cd03825 284 ALACGT-----------------PVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARELA 345 (365)
T ss_pred HHhcCC-----------------CEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHH
Confidence 999955 999999999888883 489999999999999999999744 44555555666666
Q ss_pred -hcCCHHHHHHHHHHHHH
Q 003024 529 -STHDVAYWARSFFQDME 545 (856)
Q Consensus 529 -~~~~~~~W~~~~l~~l~ 545 (856)
..+++...++++++-.+
T Consensus 346 ~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 346 ENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHhcCHHHHHHHHHHHHh
Confidence 45888888888876554
No 108
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.67 E-value=7.5e-15 Score=168.82 Aligned_cols=287 Identities=17% Similarity=0.205 Sum_probs=178.8
Q ss_pred HHHHHHHHcCCCCCEEEEeCcccchHHHHHHh-hcCCCeEEEEEccCCCC-hHHHhcCCchHHHHHHhH-hCCEEcccCH
Q 003024 189 FSQRVIEVINPEDDYVWIHDYHLMVLPTFLRR-RFTRLRMGFFLHSPFPS-SEIYRTLPVREEILKALL-NADLIGFHTF 265 (856)
Q Consensus 189 fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~-~~~~~~i~~flH~PfP~-~e~~~~lp~r~eil~~ll-~~dligf~t~ 265 (856)
...++++.++| |+|++|.+.++ |.++.. +..++++.+..|.-.+. ...|+.+ ..+.+.++ .+|.|..++.
T Consensus 115 ~~~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~ 187 (425)
T PRK05749 115 AVRRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSE 187 (425)
T ss_pred HHHHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCH
Confidence 44555677888 89999988765 555533 33467777766643332 2233322 22333333 4799988998
Q ss_pred HHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecc-cCchHHHHHhcCchHHHHHHHHHHHc-CCCeEEEecc
Q 003024 266 DYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVG-IHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVD 343 (856)
Q Consensus 266 ~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~G-Id~~~~~~~~~~~~~~~~~~~l~~~~-~~k~iil~Vd 343 (856)
...+.+.+ +|+. .. +.++|++ +|.... +........+++.+ ++++++++++
T Consensus 188 ~~~~~l~~-----~g~~---------------~~-i~vi~n~~~d~~~~------~~~~~~~~~~r~~~~~~~~vil~~~ 240 (425)
T PRK05749 188 EDAERFLA-----LGAK---------------NE-VTVTGNLKFDIEVP------PELAARAATLRRQLAPNRPVWIAAS 240 (425)
T ss_pred HHHHHHHH-----cCCC---------------CC-cEecccccccCCCC------hhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 88877764 2321 11 2334442 222111 11112234556666 6788899998
Q ss_pred CccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC-CCC-c----ccEEEE
Q 003024 344 DMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFG-RPG-Y----EPVVFI 417 (856)
Q Consensus 344 Rld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~-~~~-~----~pvv~~ 417 (856)
+. .|+...+++||.++++++|+++ |+++| +|++. .+++++++++.+-.+. ..+ . ...+++
T Consensus 241 ~~--~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l 306 (425)
T PRK05749 241 TH--EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDVLL 306 (425)
T ss_pred CC--chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEEE
Confidence 75 5889999999999998899765 66665 34443 1234444444332110 000 0 012333
Q ss_pred cCCCCHHHHHHHHHhcceeee-ccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccc----ccc-CCc
Q 003024 418 DKPVTLSERAAYYTIAECVVV-TAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS----PSL-SGA 491 (856)
Q Consensus 418 ~~~v~~~el~aly~~ADv~vv-tS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l-~~a 491 (856)
.+ +..|+..+|+.||++++ +|..||+|++++|||+|+. |+|++...|.. +.+ .+|
T Consensus 307 ~~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-----------------PVI~g~~~~~~~e~~~~~~~~g 367 (425)
T PRK05749 307 GD--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-----------------PVISGPHTFNFKEIFERLLQAG 367 (425)
T ss_pred Ee--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-----------------CEEECCCccCHHHHHHHHHHCC
Confidence 33 36799999999999666 6888999999999999954 89987654433 222 357
Q ss_pred eeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Q 003024 492 IRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (856)
Q Consensus 492 l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (856)
.++.|.|++++|++|.++++ +++.+..+.++.++++.++. .-+++.++.+.
T Consensus 368 ~~~~~~d~~~La~~l~~ll~-~~~~~~~m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 368 AAIQVEDAEDLAKAVTYLLT-DPDARQAYGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred CeEEECCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 88889999999999999997 45666677777888887662 33344444443
No 109
>PLN02275 transferase, transferring glycosyl groups
Probab=99.66 E-value=4.7e-15 Score=167.40 Aligned_cols=239 Identities=10% Similarity=0.004 Sum_probs=155.3
Q ss_pred cCCCCCEEEEeCcccch--HHHHHHhhcCCCeEEEEEccCCCChHHHhc-C---Cc----hHHHHHH-hHhCCEEcccCH
Q 003024 197 INPEDDYVWIHDYHLMV--LPTFLRRRFTRLRMGFFLHSPFPSSEIYRT-L---PV----REEILKA-LLNADLIGFHTF 265 (856)
Q Consensus 197 ~~~~~D~VwihDyhl~l--lp~~lr~~~~~~~i~~flH~PfP~~e~~~~-l---p~----r~eil~~-ll~~dligf~t~ 265 (856)
.+| |+|++|..+.+. ++..+-.+..++|+.+.+|..+.+ .+.. . +. ...+-+. .-.+|.|-..+.
T Consensus 99 ~~~--DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~ 174 (371)
T PLN02275 99 PRP--DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTK 174 (371)
T ss_pred CCC--CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCH
Confidence 455 899999877532 344343444578899999975421 1110 0 00 0111111 123566666665
Q ss_pred HHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCc
Q 003024 266 DYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDM 345 (856)
Q Consensus 266 ~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRl 345 (856)
...+...+ ..|.. +.++|+|+ .+.|.+... . ..++ ...+.++++++|+
T Consensus 175 ~~~~~l~~--------------------~~g~~--i~vi~n~~-~~~f~~~~~-----~--~~~~--~~~~~~i~~~grl 222 (371)
T PLN02275 175 AMQHELDQ--------------------NWGIR--ATVLYDQP-PEFFRPASL-----E--IRLR--PNRPALVVSSTSW 222 (371)
T ss_pred HHHHHHHH--------------------hcCCC--eEEECCCC-HHHcCcCCc-----h--hccc--CCCcEEEEEeCce
Confidence 44443322 01111 56778884 455542211 0 0111 1245678899999
Q ss_pred cccCCHHHHHHHHHHHHH-----------------hCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 003024 346 DIFKGVDLKLLAMEHLLK-----------------QHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGR 408 (856)
Q Consensus 346 d~~KGi~~~l~A~~~ll~-----------------~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~ 408 (856)
.+.||+..+++|+..+.. ++|+ +.|+++| +|++.++++++++++
T Consensus 223 ~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~~~~~~~---------- 283 (371)
T PLN02275 223 TPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKAMYEEKISRL---------- 283 (371)
T ss_pred eccCCHHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHHHHHHHHHHc----------
Confidence 999999999999988752 2454 5588887 455555555554443
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhcceeeecc---ccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccc
Q 003024 409 PGYEPVVFIDKPVTLSERAAYYTIAECVVVTA---VRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCS 485 (856)
Q Consensus 409 ~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS---~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (856)
+...++++.+.++.+++..+|+.||+||+++ ..|||+.+.+|||||+. |+|+|..+|..
T Consensus 284 -~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~-----------------PVVa~~~gg~~ 345 (371)
T PLN02275 284 -NLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGL-----------------PVCAVSYSCIG 345 (371)
T ss_pred -CCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCC-----------------CEEEecCCChH
Confidence 3455777777889999999999999999853 24899999999999955 99999999988
Q ss_pred cccC---CceeeCCCCHHHHHHHHHHHH
Q 003024 486 PSLS---GAIRVNPWNIEATAEAMHEAI 510 (856)
Q Consensus 486 ~~l~---~al~VnP~d~~~~A~ai~~aL 510 (856)
+.+. .|++|+ |++++|++|.++|
T Consensus 346 eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 346 ELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred HHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 8883 388986 6999999998765
No 110
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.63 E-value=2.5e-14 Score=163.25 Aligned_cols=295 Identities=21% Similarity=0.228 Sum_probs=194.2
Q ss_pred CEEEEeCcccchHHHHHHhh---cCCCeEEEEEccC-----CC-ChHHHhcCCc---h---------HHHHH-HhHhCCE
Q 003024 202 DYVWIHDYHLMVLPTFLRRR---FTRLRMGFFLHSP-----FP-SSEIYRTLPV---R---------EEILK-ALLNADL 259 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~---~~~~~i~~flH~P-----fP-~~e~~~~lp~---r---------~eil~-~ll~~dl 259 (856)
|||++||||..|+|.++++. ...++..|+.|.= |+ ...-...||. . -..++ |+..+|.
T Consensus 132 DIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~ 211 (487)
T COG0297 132 DIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADA 211 (487)
T ss_pred CEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccE
Confidence 99999999999999999997 7889999999942 23 1222233441 0 01222 4666677
Q ss_pred EcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcC-----------chHHHHHHH
Q 003024 260 IGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRL-----------ADKDWRVQE 328 (856)
Q Consensus 260 igf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~-----------~~~~~~~~~ 328 (856)
|.--++.|++.-...--. .|++ | .+.+ +.-.+.-+-+|||.....+.... +........
T Consensus 212 vttVSptYa~Ei~t~~~g-~gl~-----g--~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~ 281 (487)
T COG0297 212 VTTVSPTYAGEIYTPEYG-EGLE-----G--LLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVA 281 (487)
T ss_pred EEEECHHHHHhhcccccc-ccch-----h--hhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHH
Confidence 766666666554410000 0000 0 0111 11334444567776654332110 011222344
Q ss_pred HHHHc--C---CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHh
Q 003024 329 LKQQF--E---GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRIN 403 (856)
Q Consensus 329 l~~~~--~---~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN 403 (856)
|++.+ . +.+++..|+|++..||++.+++|++.++++. ++ ||.+|.+ ...++..+..++.++.
T Consensus 282 L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g-------d~~le~~~~~la~~~~ 348 (487)
T COG0297 282 LQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG-------DPELEEALRALASRHP 348 (487)
T ss_pred HHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC-------cHHHHHHHHHHHHhcC
Confidence 55555 2 4689999999999999999999999999987 54 7777743 2467888888888876
Q ss_pred cccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcc
Q 003024 404 ETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG 483 (856)
Q Consensus 404 ~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 483 (856)
.++ .+.-..+..-...+|..||++++||..|++||+-+++|.- ++++|+.+.+|
T Consensus 349 ~~~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry-----------------GtvpIv~~tGG 402 (487)
T COG0297 349 GRV---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY-----------------GTLPIVRETGG 402 (487)
T ss_pred ceE---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc-----------------CCcceEcccCC
Confidence 643 2222344566678999999999999999999999999998 45999999999
Q ss_pred cccccC----------C-ceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh--hcCCHHHHHHHHHHHHHH
Q 003024 484 CSPSLS----------G-AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV--STHDVAYWARSFFQDMER 546 (856)
Q Consensus 484 ~~~~l~----------~-al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v--~~~~~~~W~~~~l~~l~~ 546 (856)
.++.+. + |+++.|.|.++++.||.+|+..-...+.. +++..+.. ..+++..=+.++..--+.
T Consensus 403 LadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~-w~~~~~~~m~~d~sw~~sa~~y~~lY~~ 477 (487)
T COG0297 403 LADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLL-WRKVQPNAMGADFSWDLSAKEYVELYKP 477 (487)
T ss_pred ccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHH-HHHHHHhhcccccCchhHHHHHHHHHHH
Confidence 999883 2 78898889999999999999744322210 22333333 345556666666554443
No 111
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.61 E-value=2.8e-15 Score=149.80 Aligned_cols=143 Identities=21% Similarity=0.369 Sum_probs=111.9
Q ss_pred CCCeEEEeccCccccCCHHHHHHHHHHHHHh-CCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcc
Q 003024 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ-HPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412 (856)
Q Consensus 334 ~~k~iil~VdRld~~KGi~~~l~A~~~ll~~-~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~ 412 (856)
.++++|++++|+++.||+..+++|+..+.++ .+++ .|+.+|. ++... .+..++...+ ..
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~----~l~i~G~-----~~~~~----~~~~~~~~~~-------~~ 72 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNY----KLVIVGD-----GEYKK----ELKNLIEKLN-------LK 72 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTE----EEEEESH-----CCHHH----HHHHHHHHTT-------CG
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCe----EEEEEcc-----ccccc----cccccccccc-------cc
Confidence 5789999999999999999999999999875 6654 4777762 22222 3333333322 22
Q ss_pred cEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---
Q 003024 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS--- 489 (856)
Q Consensus 413 pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--- 489 (856)
..+.+.+.++.+++.++|+.||++|.||..||+|++++|||+|+ .|+|+|..+|..+.+.
T Consensus 73 ~~i~~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g-----------------~pvI~~~~~~~~e~~~~~~ 135 (172)
T PF00534_consen 73 ENIIFLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACG-----------------CPVIASDIGGNNEIINDGV 135 (172)
T ss_dssp TTEEEEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT------------------EEEEESSTHHHHHSGTTT
T ss_pred ccccccccccccccccccccceeccccccccccccccccccccc-----------------cceeeccccCCceeecccc
Confidence 22334556778999999999999999999999999999999994 4999999888888883
Q ss_pred CceeeCCCCHHHHHHHHHHHHcCC
Q 003024 490 GAIRVNPWNIEATAEAMHEAIQMN 513 (856)
Q Consensus 490 ~al~VnP~d~~~~A~ai~~aL~m~ 513 (856)
.|+++++.|+++++++|.+++.++
T Consensus 136 ~g~~~~~~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 136 NGFLFDPNDIEELADAIEKLLNDP 159 (172)
T ss_dssp SEEEESTTSHHHHHHHHHHHHHHH
T ss_pred ceEEeCCCCHHHHHHHHHHHHCCH
Confidence 368999999999999999999865
No 112
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.53 E-value=6.7e-13 Score=150.03 Aligned_cols=267 Identities=13% Similarity=0.124 Sum_probs=167.3
Q ss_pred cCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCc-hHHHHHHhHhCCEEcccCHHHHHHHHHHH
Q 003024 197 INPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPV-REEILKALLNADLIGFHTFDYARHFLSCC 275 (856)
Q Consensus 197 ~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~-r~eil~~ll~~dligf~t~~~~~~Fl~~~ 275 (856)
.+.++.++|.+..-...+... .+..++.+-+|-.|+...... +. ....-+.+-.||+|-..+....+.+..
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~~--~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~-- 170 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGGP--PELLEAERRLLKRADLVFTTSPSLYEAKRR-- 170 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCCC--HHHHHHHHHHHHhCCEEEECCHHHHHHHhh--
Confidence 344457888875444443333 556788888776655322110 10 011223344688887777655433221
Q ss_pred HhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHHH
Q 003024 276 SRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLKL 355 (856)
Q Consensus 276 ~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l 355 (856)
+ + .++.++|+|+|.+.|......+.. .+.+ ...++++|+++|+++..+++. +|
T Consensus 171 ------------------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll 223 (373)
T cd04950 171 ------------------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LL 223 (373)
T ss_pred ------------------C-C--CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HH
Confidence 1 1 246678999999998643221110 1111 114678999999999966654 33
Q ss_pred HHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcce
Q 003024 356 LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAEC 435 (856)
Q Consensus 356 ~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv 435 (856)
. .+.+.+|+++ |+.||... ...+. ..+ . . .+.+.+.|.++.+++.++|+.||+
T Consensus 224 ~---~la~~~p~~~----~vliG~~~-----~~~~~----~~~----~------~-~~nV~~~G~~~~~~l~~~l~~~Dv 276 (373)
T cd04950 224 E---ALAKARPDWS----FVLIGPVD-----VSIDP----SAL----L------R-LPNVHYLGPKPYKELPAYLAGFDV 276 (373)
T ss_pred H---HHHHHCCCCE----EEEECCCc-----CccCh----hHh----c------c-CCCEEEeCCCCHHHHHHHHHhCCE
Confidence 3 3445678875 77777431 10111 111 0 1 133556789999999999999999
Q ss_pred eeeccc-----cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccCCceeeCCCCHHHHHHHHHHHH
Q 003024 436 VVVTAV-----RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGAIRVNPWNIEATAEAMHEAI 510 (856)
Q Consensus 436 ~vvtS~-----~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL 510 (856)
+++|+. ++++++..+|||||+. |+|+|.+.++.+.. ++..+.+.|.++++++|.++|
T Consensus 277 ~l~P~~~~~~~~~~~P~Kl~EylA~G~-----------------PVVat~~~~~~~~~-~~~~~~~~d~~~~~~ai~~~l 338 (373)
T cd04950 277 AILPFRLNELTRATSPLKLFEYLAAGK-----------------PVVATPLPEVRRYE-DEVVLIADDPEEFVAAIEKAL 338 (373)
T ss_pred EecCCccchhhhcCCcchHHHHhccCC-----------------CEEecCcHHHHhhc-CcEEEeCCCHHHHHHHHHHHH
Confidence 999985 3578899999999965 99998876554433 344455679999999999988
Q ss_pred cCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHH
Q 003024 511 QMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMER 546 (856)
Q Consensus 511 ~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 546 (856)
..+..++..+. ++.+.+|++..-++.+++.|..
T Consensus 339 ~~~~~~~~~~~---~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 339 LEDGPARERRR---LRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred hcCCchHHHHH---HHHHHHCCHHHHHHHHHHHHHh
Confidence 65544433322 2268889999989888866653
No 113
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.52 E-value=1.2e-13 Score=136.79 Aligned_cols=200 Identities=19% Similarity=0.232 Sum_probs=123.6
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC--CCccEEeeCCEEEEeCC
Q 003024 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC--KKLGIAAEHGYFMRWSA 666 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~--~~lgliaenG~~I~~~~ 666 (856)
.++++||+|+||||++++ .+..|.. ..|.+| .+.|..|++||.++..++..+-..+ +.+.+++|||+.|+.+.
T Consensus 5 ~~~~lIFtDlD~TLl~~~-ye~~pA~---pv~~el-~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 5 QMPLLIFTDLDGTLLPHS-YEWQPAA---PVLLEL-KDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred ccceEEEEcccCcccCCC-CCCCccc---hHHHHH-HHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 468999999999999932 3444443 445554 6679999999999999988877654 56889999999999764
Q ss_pred CcceEecCC--C--Cc---ccH---HHHHHHHHHHHhhcCCcceEEecc--------------cceEEeeecCCCCCCch
Q 003024 667 DEEWQNCGQ--S--VD---FGW---IQIAEPVMKLYTESTDGSYIEIKE--------------SALVWHHRDADPGFGSS 722 (856)
Q Consensus 667 ~~~w~~~~~--~--~~---~~w---~~~v~~i~~~~~~~~~Gs~ie~k~--------------~~l~~~~~~~dp~~~~~ 722 (856)
+ |..... . .. ... .+.+.+.++...+.+.-.++.+.. ..++.. +........+
T Consensus 80 ~--~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~-rEyseti~~r 156 (274)
T COG3769 80 G--WFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAML-REYSETIIWR 156 (274)
T ss_pred c--ccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHH-HHhhhheeec
Confidence 3 222100 0 00 011 122222222222211111111100 000000 0000000011
Q ss_pred hHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003024 723 QAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 723 ~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
.-++....+...+...+..++.|..+.-|......||.|+.++++.+...+- ..-++..||+.||.+||+....
T Consensus 157 s~d~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~-~r~t~~~GDg~nD~Pl~ev~d~ 230 (274)
T COG3769 157 SSDERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGG-ARTTLGLGDGPNDAPLLEVMDY 230 (274)
T ss_pred ccchHHHHHHHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhcCc-eeEEEecCCCCCcccHHHhhhh
Confidence 2234555666677777889999999999999999999999999998743332 2259999999999999999874
No 114
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.49 E-value=8.4e-14 Score=147.44 Aligned_cols=187 Identities=14% Similarity=0.155 Sum_probs=144.1
Q ss_pred HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc-CCCeEEEeccCccccCCHHH
Q 003024 275 CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF-EGKTVLLGVDDMDIFKGVDL 353 (856)
Q Consensus 275 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~k~iil~VdRld~~KGi~~ 353 (856)
.+|.+.+++.++.+.+ +.-.-..-++.++|+-++...|.+.... +. .+...|+.++||-+.||+++
T Consensus 146 id~~IcVshtskentv-lr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDl 212 (426)
T KOG1111|consen 146 IDRIICVSHTSKENTV-LRGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDL 212 (426)
T ss_pred CCcEEEEeecCCCceE-EEeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHH
Confidence 4455667777766532 2222233478899999999998753221 22 35588999999999999999
Q ss_pred HHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q 003024 354 KLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIA 433 (856)
Q Consensus 354 ~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~A 433 (856)
++..+.++-++||+.+ ++.+| +||....+++-+++. ..+..+.+.|.++++++-..|...
T Consensus 213 l~~iIp~vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~-----------~l~~rV~~lG~v~h~~Vr~vl~~G 272 (426)
T KOG1111|consen 213 LLEIIPSVCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL-----------FLQDRVVMLGTVPHDRVRDVLVRG 272 (426)
T ss_pred HHHHHHHHHhcCCCee----EEEec-----CCcccchHHHHHHHh-----------hccCceEEecccchHHHHHHHhcC
Confidence 9999999999999977 77665 666544555554444 233455577899999999999999
Q ss_pred ceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccCCc-eeeCCCCHHHHHHHHHHHHc
Q 003024 434 ECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSGA-IRVNPWNIEATAEAMHEAIQ 511 (856)
Q Consensus 434 Dv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a-l~VnP~d~~~~A~ai~~aL~ 511 (856)
|||+.||+.|.|+++..||+.|+. ++|.+..+|..+.|... +..-+-.++++++++.+|++
T Consensus 273 ~IFlntSlTEafc~~ivEAaScGL-----------------~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~ 334 (426)
T KOG1111|consen 273 DIFLNTSLTEAFCMVIVEAASCGL-----------------PVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAIT 334 (426)
T ss_pred cEEeccHHHHHHHHHHHHHHhCCC-----------------EEEEeecCCccccCCccceeccCCChHHHHHHHHHHHH
Confidence 999999999999999999999965 88999999999999544 43555578999999988886
No 115
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.43 E-value=1.7e-11 Score=139.09 Aligned_cols=191 Identities=16% Similarity=0.178 Sum_probs=124.6
Q ss_pred EEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCccccCCHHHHHHHHHHHHHh----CCCCcCce
Q 003024 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ----HPKWQGRA 372 (856)
Q Consensus 300 ~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld~~KGi~~~l~A~~~ll~~----~p~~~~~v 372 (856)
+|.+++++|+...+... + ...++++++ +++++|+.+||....||+...++++..++.. .+++
T Consensus 174 ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~---- 242 (382)
T PLN02605 174 QIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIG---- 242 (382)
T ss_pred HEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCc----
Confidence 34556778876433211 1 123355665 4688999999999999999999999876522 2333
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccce
Q 003024 373 VLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEY 452 (856)
Q Consensus 373 vLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea 452 (856)
.++.++. +++ ++++++++... + ..| .+.|.+ +++..||++||++|.+| .++++.||
T Consensus 243 ~~~vi~G----~~~---~~~~~L~~~~~------~----~~v-~~~G~~--~~~~~l~~aaDv~V~~~----g~~ti~EA 298 (382)
T PLN02605 243 QVVVICG----RNK---KLQSKLESRDW------K----IPV-KVRGFV--TNMEEWMGACDCIITKA----GPGTIAEA 298 (382)
T ss_pred eEEEEEC----CCH---HHHHHHHhhcc------c----CCe-EEEecc--ccHHHHHHhCCEEEECC----CcchHHHH
Confidence 2333432 222 23333333210 0 123 455665 47999999999999865 37899999
Q ss_pred eeeecCCCCCCCCCCCCCCCCceEEecCCc-----cccccc-CCceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Q 003024 453 IVCRQGVSGSESSSESSAPKKSMLVVSEFI-----GCSPSL-SGAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYR 526 (856)
Q Consensus 453 ~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~-----G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 526 (856)
|+|+. |+|++... |..+.+ .++..+.+.|+++++++|.++|..+++.++.+.++.++
T Consensus 299 ma~g~-----------------PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~~ 361 (382)
T PLN02605 299 LIRGL-----------------PIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENALK 361 (382)
T ss_pred HHcCC-----------------CEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99955 99999852 333444 34444456899999999999998645666666677777
Q ss_pred hhhcCCHHHHHHHHHH
Q 003024 527 YVSTHDVAYWARSFFQ 542 (856)
Q Consensus 527 ~v~~~~~~~W~~~~l~ 542 (856)
+...+....-++.+++
T Consensus 362 ~~~~~a~~~i~~~l~~ 377 (382)
T PLN02605 362 LARPEAVFDIVHDLHE 377 (382)
T ss_pred hcCCchHHHHHHHHHH
Confidence 7777776666654443
No 116
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.27 E-value=1.4e-10 Score=130.96 Aligned_cols=186 Identities=13% Similarity=0.127 Sum_probs=141.6
Q ss_pred CeEEEeccCccccCCHHHHHHHHHHHHHhCCCCc-CceEEEEEecC-CCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003024 336 KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQ-GRAVLVQIANP-ARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (856)
Q Consensus 336 k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~-~~vvLvqi~~p-~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~p 413 (856)
..+...+.|+.+-||+.+.|.||..+...-|+.. ....++..+++ ..+...+..++..++.+++++.+. +..
T Consensus 273 d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l------~g~ 346 (495)
T KOG0853|consen 273 DRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL------LGQ 346 (495)
T ss_pred ceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc------cCc
Confidence 6789999999999999999999999988776521 12444444433 333344555666777777777432 134
Q ss_pred EEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---C
Q 003024 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---G 490 (856)
Q Consensus 414 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 490 (856)
.++|..+.++.+.+.++..+.+..+++..|.||+|++|||+|+. |+|++..+|..|.+. .
T Consensus 347 ~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~gl-----------------PvvAt~~GGP~EiV~~~~t 409 (495)
T KOG0853|consen 347 FVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGL-----------------PVVATNNGGPAEIVVHGVT 409 (495)
T ss_pred eEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCC-----------------CEEEecCCCceEEEEcCCc
Confidence 67777778888888888888888889988999999999999965 999999999999993 4
Q ss_pred ceeeCCCCHH---HHHHHHHHHHcCCHHHHHHHHHHHhhhhhc-CCHHHHHHHHHHHHHHHHHh
Q 003024 491 AIRVNPWNIE---ATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWARSFFQDMERTCKD 550 (856)
Q Consensus 491 al~VnP~d~~---~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~~ 550 (856)
|++++| +.+ .+|++|.++.+.+ +.+....++.++.|.+ +++ +.|.+.+.....+
T Consensus 410 G~l~dp-~~e~~~~~a~~~~kl~~~p-~l~~~~~~~G~~rV~e~fs~----~~~~~ri~~~~~~ 467 (495)
T KOG0853|consen 410 GLLIDP-GQEAVAELADALLKLRRDP-ELWARMGKNGLKRVKEMFSW----QHYSERIASVLGK 467 (495)
T ss_pred ceeeCC-chHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHhH----HHHHHHHHHHhHh
Confidence 999999 666 5999999999855 4477778889999988 555 5555555554433
No 117
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.23 E-value=1.6e-10 Score=118.95 Aligned_cols=111 Identities=19% Similarity=0.212 Sum_probs=81.0
Q ss_pred eccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCC
Q 003024 341 GVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420 (856)
Q Consensus 341 ~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~ 420 (856)
++||+.+.||+...++|+..+.+++|+++ ++.+|... +....+..+... + ....+. +.+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~-----~~~~~~~~~~~~--------~--~~~~v~-~~~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP-----EREYLEELLAAL--------L--LLDRVI-FLGG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC-----ChHHHHHHHHhc--------C--CcccEE-EeCC
Confidence 99999999999999999999998887654 88887532 111111111111 1 112344 4445
Q ss_pred C-CHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc
Q 003024 421 V-TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL 488 (856)
Q Consensus 421 v-~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (856)
+ +.+++..+++.||+++.||..||++.+.+|||+|+. |+|+|+..|..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~-----------------pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGL-----------------PVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCC-----------------CEEEcCCCCcceEE
Confidence 5 456666666679999999999999999999999954 99999999887755
No 118
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.20 E-value=3.9e-10 Score=122.13 Aligned_cols=199 Identities=21% Similarity=0.248 Sum_probs=141.7
Q ss_pred EEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCC--CeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEE
Q 003024 300 GIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEG--KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQI 377 (856)
Q Consensus 300 ~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~--k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi 377 (856)
.+.+.|.|++...+... . ...... +.++++++|+++.||+...++|+..+.+..++ +.++.+
T Consensus 173 ~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~~ 236 (381)
T COG0438 173 KIVVIPNGIDTEKFAPA-----------R-IGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVIV 236 (381)
T ss_pred CceEecCCcCHHHcCcc-----------c-cCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEEE
Confidence 55678999998877531 0 000112 37899999999999999999999999887765 446666
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeec
Q 003024 378 ANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (856)
Q Consensus 378 ~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 457 (856)
|..... ...+..++.+.+. .+.+.+.+.++.+++..+|+.||+++.||..||+|++.+||++|+.
T Consensus 237 g~~~~~--------~~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~ 301 (381)
T COG0438 237 GDGPER--------REELEKLAKKLGL-------EDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGT 301 (381)
T ss_pred cCCCcc--------HHHHHHHHHHhCC-------CCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcCC
Confidence 643311 1222223333322 2344557788888999999999999999999999999999999953
Q ss_pred CCCCCCCCCCCCCCCCceEEecCCcccccccCC---ceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCH
Q 003024 458 GVSGSESSSESSAPKKSMLVVSEFIGCSPSLSG---AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDV 533 (856)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~ 533 (856)
|+|+|...|..+.+.+ |+++++.|.+++++++..++++. +.++...+..++.+ ..+++
T Consensus 302 -----------------pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 363 (381)
T COG0438 302 -----------------PVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSW 363 (381)
T ss_pred -----------------cEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCH
Confidence 9999999998888843 77888888999999999999876 33333333233334 56777
Q ss_pred HHHHHHHHHHHHHH
Q 003024 534 AYWARSFFQDMERT 547 (856)
Q Consensus 534 ~~W~~~~l~~l~~~ 547 (856)
..-++.+.+-+...
T Consensus 364 ~~~~~~~~~~~~~~ 377 (381)
T COG0438 364 ERIAEQLLELYEEL 377 (381)
T ss_pred HHHHHHHHHHHHHH
Confidence 77666555555443
No 119
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.20 E-value=2.6e-09 Score=121.06 Aligned_cols=273 Identities=10% Similarity=0.082 Sum_probs=160.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEc
Q 003024 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIG 261 (856)
Q Consensus 182 Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dlig 261 (856)
+...+..-..++++..+| |+|..| +....++.+.+....++|+....+-..+... .+.+ .+|.+-
T Consensus 88 ~~~~~~~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~td~~~~~~---------~~~~---~ad~i~ 152 (380)
T PRK13609 88 YANFGRKRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVLTDFCLHKI---------WVHR---EVDRYF 152 (380)
T ss_pred HHHHHHHHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeCCCCCCcc---------cccC---CCCEEE
Confidence 334444555667777788 888885 6667788777666666776533321111110 0111 588887
Q ss_pred ccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCch-HHHHHhcCchHHHHHHHHHHHc---CCCe
Q 003024 262 FHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMG-QIESVLRLADKDWRVQELKQQF---EGKT 337 (856)
Q Consensus 262 f~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~-~~~~~~~~~~~~~~~~~l~~~~---~~k~ 337 (856)
..+....+.+.+ .|+.. .++.+ +|++.. .|... .+ ...+++++ ++++
T Consensus 153 ~~s~~~~~~l~~-----~gi~~---------------~ki~v--~G~p~~~~f~~~---~~----~~~~~~~~~l~~~~~ 203 (380)
T PRK13609 153 VATDHVKKVLVD-----IGVPP---------------EQVVE--TGIPIRSSFELK---IN----PDIIYNKYQLCPNKK 203 (380)
T ss_pred ECCHHHHHHHHH-----cCCCh---------------hHEEE--ECcccChHHcCc---CC----HHHHHHHcCCCCCCc
Confidence 777554444332 13210 12222 244332 23211 11 11244554 2444
Q ss_pred -EEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEE
Q 003024 338 -VLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVF 416 (856)
Q Consensus 338 -iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~ 416 (856)
+++..|++...||+...++++.+ .|++ .++.++.. ++ .+++++++++++.+ ..|++
T Consensus 204 ~il~~~G~~~~~k~~~~li~~l~~----~~~~----~~viv~G~---~~----~~~~~l~~~~~~~~--------~~v~~ 260 (380)
T PRK13609 204 ILLIMAGAHGVLGNVKELCQSLMS----VPDL----QVVVVCGK---NE----ALKQSLEDLQETNP--------DALKV 260 (380)
T ss_pred EEEEEcCCCCCCcCHHHHHHHHhh----CCCc----EEEEEeCC---CH----HHHHHHHHHHhcCC--------CcEEE
Confidence 56667999999999988888742 3544 36666531 12 23344444443321 12444
Q ss_pred EcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecC-Ccccc----ccc-CC
Q 003024 417 IDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSE-FIGCS----PSL-SG 490 (856)
Q Consensus 417 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~----~~l-~~ 490 (856)
.+.+ +++..+|+.||++|. ++.|++..|||+|+. |+|++. ..|.. ..+ ..
T Consensus 261 -~g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~-----------------PvI~~~~~~g~~~~n~~~~~~~ 316 (380)
T PRK13609 261 -FGYV--ENIDELFRVTSCMIT----KPGGITLSEAAALGV-----------------PVILYKPVPGQEKENAMYFERK 316 (380)
T ss_pred -Eech--hhHHHHHHhccEEEe----CCCchHHHHHHHhCC-----------------CEEECCCCCCcchHHHHHHHhC
Confidence 4565 468899999999874 455899999999965 888876 44421 122 23
Q ss_pred ceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHH
Q 003024 491 AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMER 546 (856)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 546 (856)
|..+.+.|.++++++|.++++. ++.+..+.++.+++...++....++.+++.+..
T Consensus 317 G~~~~~~~~~~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~ 371 (380)
T PRK13609 317 GAAVVIRDDEEVFAKTEALLQD-DMKLLQMKEAMKSLYLPEPADHIVDDILAENHV 371 (380)
T ss_pred CcEEEECCHHHHHHHHHHHHCC-HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhh
Confidence 5555578999999999999984 444555555666777778888888887776654
No 120
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.19 E-value=8.2e-10 Score=123.92 Aligned_cols=258 Identities=17% Similarity=0.093 Sum_probs=159.0
Q ss_pred HHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHH
Q 003024 192 RVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHF 271 (856)
Q Consensus 192 ~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~F 271 (856)
++++..+| |+|+.|.....+. ..+..+..+.|+.++.|..+|.. -+.++- -.+|.+-..+..- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~~-~~~~~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSGP-GGLAARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchhH-HHHHHHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---h
Confidence 45566677 9999998554433 43445566788888777655431 011111 1234433222210 0
Q ss_pred HHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCH
Q 003024 272 LSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGV 351 (856)
Q Consensus 272 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi 351 (856)
. . ....++.++|+|++.+.+.. +.. ..++ ..-.+.++|+.+++....|++
T Consensus 149 ~--------------------~--~~~~~i~vi~n~v~~~~~~~----~~~---~~~~-~~~~~~~~i~~~gg~~~~~~~ 198 (357)
T PRK00726 149 P--------------------E--FFKPKAVVTGNPVREEILAL----AAP---PARL-AGREGKPTLLVVGGSQGARVL 198 (357)
T ss_pred h--------------------c--cCCCCEEEECCCCChHhhcc----cch---hhhc-cCCCCCeEEEEECCcHhHHHH
Confidence 0 0 12245778999999876542 110 0111 111367888999999999998
Q ss_pred HHHH-HHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHH
Q 003024 352 DLKL-LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYY 430 (856)
Q Consensus 352 ~~~l-~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 430 (856)
..++ +|+.++.+. | .+++++|. ++. +++.+.++ . +.. +.+.+.+ +++..+|
T Consensus 199 ~~~l~~a~~~~~~~-~-----~~~~~~G~-----g~~-~~~~~~~~---------~---~~~--v~~~g~~--~~~~~~~ 250 (357)
T PRK00726 199 NEAVPEALALLPEA-L-----QVIHQTGK-----GDL-EEVRAAYA---------A---GIN--AEVVPFI--DDMAAAY 250 (357)
T ss_pred HHHHHHHHHHhhhC-c-----EEEEEcCC-----CcH-HHHHHHhh---------c---CCc--EEEeehH--hhHHHHH
Confidence 7766 888877432 2 33555553 222 23322221 1 222 3345554 6899999
Q ss_pred HhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccc--------cccc---CCceeeCCCC-
Q 003024 431 TIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC--------SPSL---SGAIRVNPWN- 498 (856)
Q Consensus 431 ~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--------~~~l---~~al~VnP~d- 498 (856)
..||+++.+| | +.+.+|||+|+. |+|++...|. ++.+ ..|+++.|.|
T Consensus 251 ~~~d~~i~~~---g-~~~~~Ea~~~g~-----------------Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~ 309 (357)
T PRK00726 251 AAADLVICRA---G-ASTVAELAAAGL-----------------PAILVPLPHAADDHQTANARALVDAGAALLIPQSDL 309 (357)
T ss_pred HhCCEEEECC---C-HHHHHHHHHhCC-----------------CEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccC
Confidence 9999999877 3 588999999965 8888754321 2334 2378888888
Q ss_pred -HHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH
Q 003024 499 -IEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDME 545 (856)
Q Consensus 499 -~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 545 (856)
+++++++|.+++.. ++.++...+..+++..+.+...-++.+++.+.
T Consensus 310 ~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 310 TPEKLAEKLLELLSD-PERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred CHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 99999999999985 56666666667777888888888877766543
No 121
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.18 E-value=1.6e-09 Score=120.90 Aligned_cols=249 Identities=16% Similarity=0.159 Sum_probs=149.4
Q ss_pred HHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHH
Q 003024 190 SQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYAR 269 (856)
Q Consensus 190 a~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~ 269 (856)
+.++++..+| |+|+.|.... .++..+..+..++|+.++-|..||.. . +.++ ...+|.|...+....+
T Consensus 81 ~~~~i~~~~p--DvI~~~~~~~-~~~~~~~a~~~~~p~v~~~~~~~~~~--~------~~~~--~~~~~~vi~~s~~~~~ 147 (350)
T cd03785 81 ARKILKKFKP--DVVVGFGGYV-SGPVGLAAKLLGIPLVIHEQNAVPGL--A------NRLL--ARFADRVALSFPETAK 147 (350)
T ss_pred HHHHHHhcCC--CEEEECCCCc-chHHHHHHHHhCCCEEEEcCCCCccH--H------HHHH--HHhhCEEEEcchhhhh
Confidence 3455566677 8999986544 34444545555778877666555421 0 1111 1125666555432221
Q ss_pred HHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc---CCCeEEEeccCcc
Q 003024 270 HFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF---EGKTVLLGVDDMD 346 (856)
Q Consensus 270 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~k~iil~VdRld 346 (856)
. + ...++.++|+|+|...+... + . ++++ +++++|+.+++..
T Consensus 148 ~-----------------------~--~~~~~~~i~n~v~~~~~~~~---~----~----~~~~~~~~~~~~i~~~~g~~ 191 (350)
T cd03785 148 Y-----------------------F--PKDKAVVTGNPVREEILALD---R----E----RARLGLRPGKPTLLVFGGSQ 191 (350)
T ss_pred c-----------------------C--CCCcEEEECCCCchHHhhhh---h----h----HHhcCCCCCCeEEEEECCcH
Confidence 1 0 11245678999998766421 1 1 2232 4677888888877
Q ss_pred ccCCHHHHH-HHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHH
Q 003024 347 IFKGVDLKL-LAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSE 425 (856)
Q Consensus 347 ~~KGi~~~l-~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~e 425 (856)
..|+...++ .|++.+.+ ++ +.++.++. ++ +.+++++.++++ + +.+.+.+.+ ++
T Consensus 192 ~~~~~~~~l~~a~~~l~~--~~----~~~~~i~G----~g-~~~~l~~~~~~~--------~-----~~v~~~g~~--~~ 245 (350)
T cd03785 192 GARAINEAVPEALAELLR--KR----LQVIHQTG----KG-DLEEVKKAYEEL--------G-----VNYEVFPFI--DD 245 (350)
T ss_pred hHHHHHHHHHHHHHHhhc--cC----eEEEEEcC----Cc-cHHHHHHHHhcc--------C-----CCeEEeehh--hh
Confidence 788876554 77776642 22 33333331 22 334444433221 1 123345544 78
Q ss_pred HHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcc--------ccccc---CCceee
Q 003024 426 RAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG--------CSPSL---SGAIRV 494 (856)
Q Consensus 426 l~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G--------~~~~l---~~al~V 494 (856)
+..+|+.||++|.+| | +.+.+|||+|+. |+|++...| .++.+ ..|++|
T Consensus 246 ~~~~l~~ad~~v~~s---g-~~t~~Eam~~G~-----------------Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v 304 (350)
T cd03785 246 MAAAYAAADLVISRA---G-ASTVAELAALGL-----------------PAILIPLPYAADDHQTANARALVKAGAAVLI 304 (350)
T ss_pred HHHHHHhcCEEEECC---C-HhHHHHHHHhCC-----------------CEEEeecCCCCCCcHHHhHHHHHhCCCEEEE
Confidence 999999999999876 3 478999999965 888876543 12344 237899
Q ss_pred CCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHH
Q 003024 495 NPW--NIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAY 535 (856)
Q Consensus 495 nP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 535 (856)
++. |.++++++|.+++. +++.++...++.++++..+...+
T Consensus 305 ~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~ 346 (350)
T cd03785 305 PQEELTPERLAAALLELLS-DPERLKAMAEAARSLARPDAAER 346 (350)
T ss_pred ecCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHH
Confidence 987 89999999999996 45555555666677766554443
No 122
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.15 E-value=3.5e-09 Score=119.37 Aligned_cols=251 Identities=14% Similarity=0.118 Sum_probs=145.2
Q ss_pred HHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhH--hCCEEcccC
Q 003024 187 KIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL--NADLIGFHT 264 (856)
Q Consensus 187 ~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~dligf~t 264 (856)
..|++ +++..+| |+|++|......+...+-.+..++|++..-+-- -+.+.+. |+.+++.+-+. .||++--.+
T Consensus 76 ~~l~~-~l~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 76 EGLEE-LLLEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHH-HHHHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCC
Confidence 44444 3455677 999999655554544443444577886432210 0111111 22233322221 257766677
Q ss_pred HHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeeccc-CchHHHHHhcCchHHHHHHHHHHHcC-C-CeEEEe
Q 003024 265 FDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGI-HMGQIESVLRLADKDWRVQELKQQFE-G-KTVLLG 341 (856)
Q Consensus 265 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~~-~-k~iil~ 341 (856)
....+++++ +|.+ ..+|.++++|+ |..... ... + ....+++++. + ..+++.
T Consensus 150 ~~~~~~l~~-----~G~~---------------~~~I~vign~~~d~~~~~-~~~-~----~~~~~~~~~~~~~~~vl~~ 203 (365)
T TIGR00236 150 EQAKDNLLR-----ENVK---------------ADSIFVTGNTVIDALLTN-VEI-A----YSSPVLSEFGEDKRYILLT 203 (365)
T ss_pred HHHHHHHHH-----cCCC---------------cccEEEeCChHHHHHHHH-Hhh-c----cchhHHHhcCCCCCEEEEe
Confidence 766666654 2321 23567788886 432221 111 0 1123444452 2 344455
Q ss_pred ccCcc-ccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCC
Q 003024 342 VDDMD-IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKP 420 (856)
Q Consensus 342 VdRld-~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~ 420 (856)
..|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.+ +.+.++ ..+.+.+.+.
T Consensus 204 ~hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~---~~~~~~-------~~~~v~~~~~ 262 (365)
T TIGR00236 204 LHRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREP---LHKHLG-------DSKRVHLIEP 262 (365)
T ss_pred cCchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHH---HHHHhC-------CCCCEEEECC
Confidence 55653 45899999999999998888764 55554332 11 1222 222221 1122445568
Q ss_pred CCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEec-CCccccccc-CC-ceeeCCC
Q 003024 421 VTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS-EFIGCSPSL-SG-AIRVNPW 497 (856)
Q Consensus 421 v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l-~~-al~VnP~ 497 (856)
++..++..+|+.||+++.+| |.+..||++|+. |+|++ +.+|..+.+ .+ ++++ |.
T Consensus 263 ~~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~-----------------PvI~~~~~~~~~e~~~~g~~~lv-~~ 319 (365)
T TIGR00236 263 LEYLDFLNLAANSHLILTDS-----GGVQEEAPSLGK-----------------PVLVLRDTTERPETVEAGTNKLV-GT 319 (365)
T ss_pred CChHHHHHHHHhCCEEEECC-----hhHHHHHHHcCC-----------------CEEECCCCCCChHHHhcCceEEe-CC
Confidence 88999999999999999888 445799999955 88886 555555554 23 5566 67
Q ss_pred CHHHHHHHHHHHHcCC
Q 003024 498 NIEATAEAMHEAIQMN 513 (856)
Q Consensus 498 d~~~~A~ai~~aL~m~ 513 (856)
|+++++++|.++|+.+
T Consensus 320 d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 320 DKENITKAAKRLLTDP 335 (365)
T ss_pred CHHHHHHHHHHHHhCh
Confidence 9999999999999743
No 123
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.10 E-value=2.4e-09 Score=119.45 Aligned_cols=181 Identities=16% Similarity=0.132 Sum_probs=116.5
Q ss_pred EEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCccccCCHHHH-HHHHHHHHHhCCCCcCceEEEEEecC
Q 003024 302 KIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIFKGVDLK-LLAMEHLLKQHPKWQGRAVLVQIANP 380 (856)
Q Consensus 302 ~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~KGi~~~-l~A~~~ll~~~p~~~~~vvLvqi~~p 380 (856)
.++|+|++...+... +. ..++ ..-+++++|++++|....|++... +.|++++.+. +++ ++.++.
T Consensus 153 ~~i~n~v~~~~~~~~---~~----~~~~-~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~g- 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP---VP----RERF-GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQTG- 217 (348)
T ss_pred eEEcCCcCHHHhccc---ch----hhhc-CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEECC-
Confidence 568999987654321 00 1111 111467889999998888987654 4788777543 222 333332
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCC
Q 003024 381 ARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVS 460 (856)
Q Consensus 381 ~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~ 460 (856)
+++. ++++ +.+.+. +...++.+. . .++..+|+.||++|.+| | +.+.+|||+|+.
T Consensus 218 ---~~~~-~~l~----~~~~~~-------~l~~~v~~~---~-~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~--- 271 (348)
T TIGR01133 218 ---KNDL-EKVK----NVYQEL-------GIEAIVTFI---D-ENMAAAYAAADLVISRA---G-ASTVAELAAAGV--- 271 (348)
T ss_pred ---cchH-HHHH----HHHhhC-------CceEEecCc---c-cCHHHHHHhCCEEEECC---C-hhHHHHHHHcCC---
Confidence 2222 3333 333321 223344343 2 27899999999999865 4 689999999955
Q ss_pred CCCCCCCCCCCCCceEEecCCcccc-------ccc---CCceeeCCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHhhhh
Q 003024 461 GSESSSESSAPKKSMLVVSEFIGCS-------PSL---SGAIRVNPWN--IEATAEAMHEAIQMNEAEKQLRHEKHYRYV 528 (856)
Q Consensus 461 ~~~~~~~~~~~~~g~lV~Se~~G~~-------~~l---~~al~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 528 (856)
|+|++.+.|.. +.+ ..|++++|.| +++++++|.++++ +++.++.+.++.++++
T Consensus 272 --------------Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~ 336 (348)
T TIGR01133 272 --------------PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLL-DPANLEAMAEAARKLA 336 (348)
T ss_pred --------------CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHc-CHHHHHHHHHHHHhcC
Confidence 88888775532 334 2488898876 9999999999996 5566666677788888
Q ss_pred hcCCHHHHHH
Q 003024 529 STHDVAYWAR 538 (856)
Q Consensus 529 ~~~~~~~W~~ 538 (856)
.++...++++
T Consensus 337 ~~~~~~~i~~ 346 (348)
T TIGR01133 337 KPDAAKRIAE 346 (348)
T ss_pred CccHHHHHHh
Confidence 8776666654
No 124
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.10 E-value=9.9e-09 Score=116.87 Aligned_cols=168 Identities=11% Similarity=0.077 Sum_probs=111.1
Q ss_pred CeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEE
Q 003024 336 KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVV 415 (856)
Q Consensus 336 k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv 415 (856)
+.++++.||+...||+..+++++ ++..|+++ ++.++. .++ ++.+++.+. .+. ...+
T Consensus 203 ~~ilv~~G~lg~~k~~~~li~~~---~~~~~~~~----~vvv~G----~~~---~l~~~l~~~---~~~------~~~v- 258 (391)
T PRK13608 203 QTILMSAGAFGVSKGFDTMITDI---LAKSANAQ----VVMICG----KSK---ELKRSLTAK---FKS------NENV- 258 (391)
T ss_pred CEEEEECCCcccchhHHHHHHHH---HhcCCCce----EEEEcC----CCH---HHHHHHHHH---hcc------CCCe-
Confidence 34667899999999999999885 34455543 655552 222 222333222 111 0123
Q ss_pred EEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc------C
Q 003024 416 FIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL------S 489 (856)
Q Consensus 416 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l------~ 489 (856)
.+.|.+ +++..+|+.||++|.. +.|++..|||+|+. |+|++...+..+.- .
T Consensus 259 ~~~G~~--~~~~~~~~~aDl~I~k----~gg~tl~EA~a~G~-----------------PvI~~~~~pgqe~~N~~~~~~ 315 (391)
T PRK13608 259 LILGYT--KHMNEWMASSQLMITK----PGGITISEGLARCI-----------------PMIFLNPAPGQELENALYFEE 315 (391)
T ss_pred EEEecc--chHHHHHHhhhEEEeC----CchHHHHHHHHhCC-----------------CEEECCCCCCcchhHHHHHHh
Confidence 355554 5799999999999863 45889999999965 88888543322211 2
Q ss_pred CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhh
Q 003024 490 GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMERTCKDH 551 (856)
Q Consensus 490 ~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~ 551 (856)
.|.-+-+.|.++++++|.++++. ++++..+.++.++....++....++.+++.+...++-+
T Consensus 316 ~G~g~~~~~~~~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 316 KGFGKIADTPEEAIKIVASLTNG-NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CCcEEEeCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 23333366999999999999974 45556666677788888888888888887776655433
No 125
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.08 E-value=9.6e-09 Score=115.30 Aligned_cols=251 Identities=14% Similarity=0.042 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEcc--CCCChHHHhcCCch--HHHHHHhHhCCEE
Q 003024 185 ANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHS--PFPSSEIYRTLPVR--EEILKALLNADLI 260 (856)
Q Consensus 185 vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~--PfP~~e~~~~lp~r--~eil~~ll~~dli 260 (856)
......+.+.+. +| |+|++|++....++..+..+..++|+..+.|- .|- +..|+. ...+. -.+|.+
T Consensus 76 ~~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~-----~~~~~~~~r~~~~--~~ad~~ 145 (363)
T cd03786 76 LLIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD-----RGMPDEENRHAID--KLSDLH 145 (363)
T ss_pred HHHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC-----CCCCchHHHHHHH--HHhhhc
Confidence 334444445444 77 89999988777676666555567888765541 110 001111 11111 134655
Q ss_pred cccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeeccc-CchHHHHHhcCchHHHHHHHHHHHc---CCC
Q 003024 261 GFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGI-HMGQIESVLRLADKDWRVQELKQQF---EGK 336 (856)
Q Consensus 261 gf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~---~~k 336 (856)
-.-+....+++.+ .|+ ...+|.++++++ |...+..... + ....++.+ .++
T Consensus 146 ~~~s~~~~~~l~~-----~G~---------------~~~kI~vign~v~d~~~~~~~~~-~-----~~~~~~~~~~~~~~ 199 (363)
T cd03786 146 FAPTEEARRNLLQ-----EGE---------------PPERIFVVGNTMIDALLRLLELA-K-----KELILELLGLLPKK 199 (363)
T ss_pred cCCCHHHHHHHHH-----cCC---------------CcccEEEECchHHHHHHHHHHhh-c-----cchhhhhcccCCCC
Confidence 5445444333332 122 223455667664 5433321111 0 01111222 345
Q ss_pred eEEEeccCccc---cCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003024 337 TVLLGVDDMDI---FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (856)
Q Consensus 337 ~iil~VdRld~---~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~p 413 (856)
.+++.++|+.. .||+..+++|++++.++ ++.++..+. ++...++++ .+.+.+.. .+
T Consensus 200 ~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~------~~~vi~~~~-----~~~~~~l~~----~~~~~~~~------~~ 258 (363)
T cd03786 200 YILVTLHRVENVDDGEQLEEILEALAELAEE------DVPVVFPNH-----PRTRPRIRE----AGLEFLGH------HP 258 (363)
T ss_pred EEEEEeCCccccCChHHHHHHHHHHHHHHhc------CCEEEEECC-----CChHHHHHH----HHHhhccC------CC
Confidence 67788999875 79999999999988543 244444332 222233333 33332210 12
Q ss_pred EEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-CCce
Q 003024 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAI 492 (856)
Q Consensus 414 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al 492 (856)
.+.+.+....+++..+|+.||++|.+|- | +..|+++|+. |+|++...+..+.+ .+|+
T Consensus 259 ~v~~~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~-----------------PvI~~~~~~~~~~~~~~g~ 316 (363)
T cd03786 259 NVLLISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLGV-----------------PVLNLRDRTERPETVESGT 316 (363)
T ss_pred CEEEECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCC-----------------CEEeeCCCCccchhhheee
Confidence 3345556678899999999999999984 4 4689999955 88888765544444 4554
Q ss_pred eeCC-CCHHHHHHHHHHHHcCCH
Q 003024 493 RVNP-WNIEATAEAMHEAIQMNE 514 (856)
Q Consensus 493 ~VnP-~d~~~~A~ai~~aL~m~~ 514 (856)
.+.+ .|+++++++|.++++.+.
T Consensus 317 ~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 317 NVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred EEecCCCHHHHHHHHHHHhcCch
Confidence 4433 379999999999998553
No 126
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.03 E-value=7.6e-10 Score=109.10 Aligned_cols=73 Identities=25% Similarity=0.229 Sum_probs=58.7
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC--CccccceEcCCh--hH-
Q 003024 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ--KPSKAKYYLDDA--AE- 831 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~s~A~y~l~~~--~e- 831 (856)
+|..+++.+++++ |++++.++++||+.||++|++.+|.. ++|..+. .+..|+|++.++ ++
T Consensus 76 ~k~~~~~~~~~~~---~~~~~~~~~vGDs~~D~~~~~~ag~~------------~~v~~~~~~~~~~a~~i~~~~~~~g~ 140 (154)
T TIGR01670 76 NKLIAFSDILEKL---ALAPENVAYIGDDLIDWPVMEKVGLS------------VAVADAHPLLIPRADYVTRIAGGRGA 140 (154)
T ss_pred chHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe------------EecCCcCHHHHHhCCEEecCCCCCcH
Confidence 3889999999999 99999999999999999999999863 4444443 257789988754 33
Q ss_pred HHHHHHHHHHhcC
Q 003024 832 VVTMLEALAEASA 844 (856)
Q Consensus 832 V~~~L~~L~~~~~ 844 (856)
+.++++.+...+.
T Consensus 141 ~~~~~~~~~~~~~ 153 (154)
T TIGR01670 141 VREVCELLLLAQG 153 (154)
T ss_pred HHHHHHHHHHhhC
Confidence 9999999887653
No 127
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.97 E-value=1.7e-09 Score=109.81 Aligned_cols=125 Identities=19% Similarity=0.268 Sum_probs=89.5
Q ss_pred cCCcEEEEEecCCCCCCCC----CCCCCCCHHHH---HHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCE
Q 003024 588 RSKSRAILFDYDGTVMPQT----SINKAPSQAVI---SIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGY 660 (856)
Q Consensus 588 ~s~~rlI~~DlDGTLl~~~----~~~~~~s~~~~---~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~ 660 (856)
...+|+|++|+||||++.. .....++..+. .+++.| +++|+.++|+|||+...+...+..+ ++.. +
T Consensus 18 ~~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L-~~~Gi~v~I~T~~~~~~v~~~l~~l---gl~~---~ 90 (183)
T PRK09484 18 AENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCL-LTSGIEVAIITGRKSKLVEDRMTTL---GITH---L 90 (183)
T ss_pred hhCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHH-HHCCCEEEEEeCCCcHHHHHHHHHc---CCce---e
Confidence 3469999999999999720 01333333333 678886 6789999999999998888877432 1100 0
Q ss_pred EEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCe
Q 003024 661 FMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPA 740 (856)
Q Consensus 661 ~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~ 740 (856)
+ .|
T Consensus 91 f-----------------------------------~g------------------------------------------ 93 (183)
T PRK09484 91 Y-----------------------------------QG------------------------------------------ 93 (183)
T ss_pred e-----------------------------------cC------------------------------------------
Confidence 0 00
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--
Q 003024 741 AVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK-- 818 (856)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-- 818 (856)
.-+|..+++.+++++ |++++++++|||+.||++|++.+|.. +.+++.
T Consensus 94 --------------~~~k~~~l~~~~~~~---gl~~~ev~~VGDs~~D~~~a~~aG~~--------------~~v~~~~~ 142 (183)
T PRK09484 94 --------------QSNKLIAFSDLLEKL---AIAPEQVAYIGDDLIDWPVMEKVGLS--------------VAVADAHP 142 (183)
T ss_pred --------------CCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCCe--------------EecCChhH
Confidence 012668889999999 99999999999999999999999963 345553
Q ss_pred --ccccceEcC
Q 003024 819 --PSKAKYYLD 827 (856)
Q Consensus 819 --~s~A~y~l~ 827 (856)
...|+|++.
T Consensus 143 ~~~~~a~~v~~ 153 (183)
T PRK09484 143 LLLPRADYVTR 153 (183)
T ss_pred HHHHhCCEEec
Confidence 356788885
No 128
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=98.86 E-value=3.9e-09 Score=100.94 Aligned_cols=128 Identities=20% Similarity=0.242 Sum_probs=88.8
Q ss_pred CeEEEeccCccccCCHHHHHH-HHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003024 336 KTVLLGVDDMDIFKGVDLKLL-AMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (856)
Q Consensus 336 k~iil~VdRld~~KGi~~~l~-A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pv 414 (856)
..++++.|++...||+..+++ |++++.+++|++ .|+.+|... + ++.++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~----~l~i~G~~~-----~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDI----ELIIIGNGP-----D------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTE----EEEEECESS------------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCE----EEEEEeCCH-----H------HHHHh-cC----------CCE
Confidence 357899999999999999999 999999999964 488787532 2 12222 11 124
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccc-cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---C
Q 003024 415 VFIDKPVTLSERAAYYTIAECVVVTAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---G 490 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ 490 (856)
. +.+.+ +|+.++|+.||+++.|+. .++++...+|||+++. |+|+|.. |+...+. .
T Consensus 56 ~-~~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~-----------------pvi~~~~-~~~~~~~~~~~ 114 (135)
T PF13692_consen 56 R-FHGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGK-----------------PVIASDN-GAEGIVEEDGC 114 (135)
T ss_dssp E-EE-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT-------------------EEEEHH-HCHCHS---SE
T ss_pred E-EcCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCC-----------------CEEECCc-chhhheeecCC
Confidence 4 45566 689999999999999984 7899999999999955 9999988 6666552 3
Q ss_pred ceeeCCCCHHHHHHHHHHHHc
Q 003024 491 AIRVNPWNIEATAEAMHEAIQ 511 (856)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~ 511 (856)
++.+ +.|+++++++|.++++
T Consensus 115 ~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 115 GVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp EEE--TT-HHHHHHHHHHHHH
T ss_pred eEEE-CCCHHHHHHHHHHHhc
Confidence 6666 8899999999999885
No 129
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=98.86 E-value=4.1e-07 Score=107.90 Aligned_cols=182 Identities=13% Similarity=0.141 Sum_probs=118.8
Q ss_pred CCCeEEEeccCccccCCHHHHHHHHHHHHH--hCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003024 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLK--QHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (856)
Q Consensus 334 ~~k~iil~VdRld~~KGi~~~l~A~~~ll~--~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~ 411 (856)
++..++..|.|+...||+.+++.+++++++ ++|+. .+.+|..|...-.+... .++.+.+.+++++ -.|. +
T Consensus 387 pd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~~g-k~~i~~i~~la~~--~~~~--~- 458 (601)
T TIGR02094 387 PDVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADGEG-KEIIQRIVEFSKR--PEFR--G- 458 (601)
T ss_pred CCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccchH-HHHHHHHHHHHhc--ccCC--C-
Confidence 356689999999999999999999999986 55552 46777777543222211 3455555555442 0121 1
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcceeee-ccc-cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-
Q 003024 412 EPVVFIDKPVTLSERAAYYTIAECVVV-TAV-RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL- 488 (856)
Q Consensus 412 ~pvv~~~~~v~~~el~aly~~ADv~vv-tS~-~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 488 (856)
.|+++. ..+..--..+|..||+++. ||. .|.-|+.-+-||.- |.|-.|-.-|...+.
T Consensus 459 -kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n------------------GgL~~sv~DG~~~E~~ 518 (601)
T TIGR02094 459 -RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN------------------GVLNLSILDGWWGEGY 518 (601)
T ss_pred -CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc------------------CCceeecccCcccccC
Confidence 355555 3455555578999999999 777 89999988888873 456666666655444
Q ss_pred --CCceeeCC------------CCHHHHHHHHHHHHc----C------CHHHHHHHHHHHhhhhhcCCHHHHHHHHHHH
Q 003024 489 --SGAIRVNP------------WNIEATAEAMHEAIQ----M------NEAEKQLRHEKHYRYVSTHDVAYWARSFFQD 543 (856)
Q Consensus 489 --~~al~VnP------------~d~~~~A~ai~~aL~----m------~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 543 (856)
.+|+.+.+ .|.+++-++|.+++- . |..-.+.+.+.+......+++.+-++++...
T Consensus 519 ~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 519 DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred CCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 34888875 899999999988772 1 1112223333333334457888877777653
No 130
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.83 E-value=1.9e-07 Score=105.78 Aligned_cols=133 Identities=17% Similarity=0.168 Sum_probs=88.6
Q ss_pred CCeE-EEe-ccCccccCC-HHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003024 335 GKTV-LLG-VDDMDIFKG-VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (856)
Q Consensus 335 ~k~i-il~-VdRld~~KG-i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~ 411 (856)
++++ ++. -+|....|+ +...++|++.+.+++|+++ +++++. +++.. +++++++.+. + +.
T Consensus 185 ~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~~----~~~~~~~~~~----~--~~ 246 (380)
T PRK00025 185 DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKRR----EQIEEALAEY----A--GL 246 (380)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----ChhhH----HHHHHHHhhc----C--CC
Confidence 4444 333 357766554 6789999999988888654 666542 12222 3333333321 0 11
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEec------------
Q 003024 412 EPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS------------ 479 (856)
Q Consensus 412 ~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~S------------ 479 (856)
.+.++. .++..+|+.||+++.+| |.+.+|+|+|+. |+|++
T Consensus 247 -~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~-----------------PvI~~~~~~~~~~~~~~ 298 (380)
T PRK00025 247 -EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLKV-----------------PMVVGYKVSPLTFWIAK 298 (380)
T ss_pred -CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCC-----------------CEEEEEccCHHHHHHHH
Confidence 133333 37899999999999998 678889999955 78876
Q ss_pred -----CCcccccccCC-----ceeeCCCCHHHHHHHHHHHHcCC
Q 003024 480 -----EFIGCSPSLSG-----AIRVNPWNIEATAEAMHEAIQMN 513 (856)
Q Consensus 480 -----e~~G~~~~l~~-----al~VnP~d~~~~A~ai~~aL~m~ 513 (856)
.+.|..+.+.+ +++++..|++++++++.+.|+.+
T Consensus 299 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~ 342 (380)
T PRK00025 299 RLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADG 342 (380)
T ss_pred HHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCH
Confidence 45555565532 36778889999999999999844
No 131
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.81 E-value=6.6e-08 Score=94.91 Aligned_cols=202 Identities=17% Similarity=0.226 Sum_probs=134.2
Q ss_pred HHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC--CCC-ccEEeeCCEE
Q 003024 585 AYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP--CKK-LGIAAEHGYF 661 (856)
Q Consensus 585 ~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~--~~~-lgliaenG~~ 661 (856)
++++-..-|+++|.||||.+ ...++++++.+.|++| + +...+.++-|-..+.+.+.++. +.. ....+|||.+
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~l-r-~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKL-R-KKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHH-h-hheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 45555667999999999999 8899999999999997 3 4789999999998888777743 122 2345799987
Q ss_pred EEeCCCcce-EecCCCCc-ccHHHHHHHHHHHHhh----cCCcceEEecccceEEee--ecCCCC----CC-----chhH
Q 003024 662 MRWSADEEW-QNCGQSVD-FGWIQIAEPVMKLYTE----STDGSYIEIKESALVWHH--RDADPG----FG-----SSQA 724 (856)
Q Consensus 662 I~~~~~~~w-~~~~~~~~-~~w~~~v~~i~~~~~~----~~~Gs~ie~k~~~l~~~~--~~~dp~----~~-----~~~a 724 (856)
-+..|...- +.+..... ..+++.+.-.+.+..+ ...|.++|.++..+.... +++..+ |. ...-
T Consensus 80 ~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR 159 (252)
T KOG3189|consen 80 AYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIR 159 (252)
T ss_pred EeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhH
Confidence 766554221 11111111 1122222223344433 234899998876665442 222111 11 1112
Q ss_pred HHHHHHHHHHhcCCC-eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeC----CchhHHHHHHccc
Q 003024 725 KELLDHLESVLANEP-AAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGD----DRSDEDMFEIIGN 797 (856)
Q Consensus 725 ~el~~~L~~~l~~~~-~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~ 797 (856)
+.+.+.|++.++++. ...+.|...++|.|.|++|-.-++.+-+. ..+.+-.||| +.||.++|..-.+
T Consensus 160 ~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d------gf~~IhFFGDkT~~GGNDyEIf~dprt 231 (252)
T KOG3189|consen 160 EKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD------GFDTIHFFGDKTMPGGNDYEIFADPRT 231 (252)
T ss_pred HHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc------CCceEEEeccccCCCCCcceeeeCCcc
Confidence 446677778888776 45567788999999999999988887653 3689999999 6799999876543
No 132
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=98.81 E-value=3.1e-08 Score=100.62 Aligned_cols=192 Identities=16% Similarity=0.246 Sum_probs=125.6
Q ss_pred HHHHHHHHhhCCCeEEEecCCChhhHHHhhc-C-C-C-CccEEeeCCEEEEeCCCcceEecCCC-C-cccHHHHHHHHHH
Q 003024 617 ISIINTLCNDARNTVFVVSGRGRDCLGKWFS-P-C-K-KLGIAAEHGYFMRWSADEEWQNCGQS-V-DFGWIQIAEPVMK 690 (856)
Q Consensus 617 ~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~-~-~-~-~lgliaenG~~I~~~~~~~w~~~~~~-~-~~~w~~~v~~i~~ 690 (856)
.+.|++| . +...|.|+||-.+..+++.+. . + . -..+.++||...+..+...|...+.. . +...++.+.-++.
T Consensus 2 ~~~L~~L-~-~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l~ 79 (220)
T PF03332_consen 2 AELLQKL-R-KKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCLR 79 (220)
T ss_dssp HHHHHHH-H-TTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-H-hcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHHH
Confidence 5678887 3 479999999999998888884 2 1 1 23578999999998888888654311 1 1112233333333
Q ss_pred HHhh----cCCcceEEecccceEEee--ecCCCC----CCc-----hhHHHHHHHHHHHhcCCCe-EEEEcCeEEEEEeC
Q 003024 691 LYTE----STDGSYIEIKESALVWHH--RDADPG----FGS-----SQAKELLDHLESVLANEPA-AVKSGQFIVEVKPQ 754 (856)
Q Consensus 691 ~~~~----~~~Gs~ie~k~~~l~~~~--~~~dp~----~~~-----~~a~el~~~L~~~l~~~~~-~v~~g~~~vEI~p~ 754 (856)
+..+ ...|.++|.+...+.+.- +++..+ |.. ..-+.+.+.|.+.+++..+ ....|...++|.|+
T Consensus 80 ~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp~ 159 (220)
T PF03332_consen 80 YISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFPK 159 (220)
T ss_dssp HHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEET
T ss_pred HHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEccccC
Confidence 3332 234899999998887763 222110 100 0113466777777877665 45678899999999
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcceEEEEeC----CchhHHHHHHccccccCCCCCCCccEEEEEeCCCccccceEcCChh
Q 003024 755 GVSKGVVAEKIFTTMAESGRHADFVLCIGD----DRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYYLDDAA 830 (856)
Q Consensus 755 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~l~~~~ 830 (856)
|++|..++++|.+. ..+++++||| +.||.|+|...+. .+.+ |.+|+
T Consensus 160 GwDKty~Lr~l~~~------~~~~I~FfGDkt~pGGNDyei~~~~rt-------------~g~~-----------V~~p~ 209 (220)
T PF03332_consen 160 GWDKTYCLRHLEDE------GFDEIHFFGDKTFPGGNDYEIFEDPRT-------------IGHT-----------VTSPE 209 (220)
T ss_dssp T-SGGGGGGGTTTT------T-SEEEEEESS-STTSTTHHHHHSTTS-------------EEEE------------SSHH
T ss_pred CccHHHHHHHHHhc------ccceEEEEehhccCCCCCceeeecCCc-------------cEEE-----------eCCHH
Confidence 99999999998653 2699999999 6899999998765 3444 37899
Q ss_pred HHHHHHHHHH
Q 003024 831 EVVTMLEALA 840 (856)
Q Consensus 831 eV~~~L~~L~ 840 (856)
+.++.|+.|.
T Consensus 210 DT~~~l~~l~ 219 (220)
T PF03332_consen 210 DTIKQLKELF 219 (220)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999988875
No 133
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=98.80 E-value=1.2e-07 Score=100.47 Aligned_cols=313 Identities=16% Similarity=0.225 Sum_probs=189.6
Q ss_pred HhHHHHHHHHHHHHHHHHH-----HcCCCCCEEEEe--CcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHH
Q 003024 177 SLWEAYVSANKIFSQRVIE-----VINPEDDYVWIH--DYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREE 249 (856)
Q Consensus 177 ~~w~~Y~~vN~~fa~~i~~-----~~~~~~D~Vwih--Dyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~e 249 (856)
..|..+--.-|..+..|+. .+.| | |||- .|-+. .|.+-| +.+.|||-+.|-|--|.+....+-.|++
T Consensus 124 ~~~~hfTllgQaigsmIl~~Eai~r~~P--d-i~IDtMGY~fs-~p~~r~--l~~~~V~aYvHYP~iS~DML~~l~qrq~ 197 (465)
T KOG1387|consen 124 STWKHFTLLGQAIGSMILAFEAIIRFPP--D-IFIDTMGYPFS-YPIFRR--LRRIPVVAYVHYPTISTDMLKKLFQRQK 197 (465)
T ss_pred ccccceehHHHHHHHHHHHHHHHHhCCc--h-heEecCCCcch-hHHHHH--HccCceEEEEecccccHHHHHHHHhhhh
Confidence 3344444444554444431 1234 3 7774 45443 343333 6689999999988777776655444321
Q ss_pred HHHHhHhCCEEcccCHHHHHHHHHH------HHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHH
Q 003024 250 ILKALLNADLIGFHTFDYARHFLSC------CSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKD 323 (856)
Q Consensus 250 il~~ll~~dligf~t~~~~~~Fl~~------~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~ 323 (856)
- + +...----|-|-|..- |....-++..=.+.+|.--+..+++.| ++|+. +.+.+++...+
T Consensus 198 s--~-----~l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~~~~~~i-VyPPC-~~e~lks~~~t---- 264 (465)
T KOG1387|consen 198 S--G-----ILVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQSNTCSI-VYPPC-STEDLKSKFGT---- 264 (465)
T ss_pred c--c-----hhhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhhccceeE-EcCCC-CHHHHHHHhcc----
Confidence 1 1 1111122355656421 111100000001122222233344444 45543 33343322111
Q ss_pred HHHHHHHHHcCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCC--CcCceEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 003024 324 WRVQELKQQFEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPK--WQGRAVLVQIANPARGRGKDLEEIQAEIHATCKR 401 (856)
Q Consensus 324 ~~~~~l~~~~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~--~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~ 401 (856)
.-+....+|+++.+.|.|+.. .|+-+...+.++|. ...++.|+++|+ .|+ ++.++.-+.++.++.+
T Consensus 265 --------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRn--eeD~ervk~Lkd~a~~ 332 (465)
T KOG1387|consen 265 --------EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRN--EEDEERVKSLKDLAEE 332 (465)
T ss_pred --------cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCC--hhhHHHHHHHHHHHHh
Confidence 012346899999999999999 77777778888887 334677877764 343 3334555667777776
Q ss_pred HhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCC
Q 003024 402 INETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF 481 (856)
Q Consensus 402 IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~ 481 (856)
++-. ..+.|.-.+|.+++..+|..|-+-|-+-..|-||+.+.||||++. .+|+-.-
T Consensus 333 L~i~-------~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGl-----------------Ipi~h~S 388 (465)
T KOG1387|consen 333 LKIP-------KHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGL-----------------IPIVHNS 388 (465)
T ss_pred cCCc-------cceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCc-----------------eEEEeCC
Confidence 6532 234566689999999999999999999999999999999999853 4444444
Q ss_pred cccc-ccc---C---CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHH
Q 003024 482 IGCS-PSL---S---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMER 546 (856)
Q Consensus 482 ~G~~-~~l---~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 546 (856)
+|.. +.+ . .|++. -+.++-||+|.++++++.+||....+..|..+.++.-....+.|...+..
T Consensus 389 gGP~lDIV~~~~G~~tGFla--~t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 389 GGPLLDIVTPWDGETTGFLA--PTDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred CCCceeeeeccCCccceeec--CChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 4432 222 1 25665 36788999999999999999887777778878777766666666654444
No 134
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.79 E-value=1.2e-08 Score=101.73 Aligned_cols=140 Identities=19% Similarity=0.233 Sum_probs=100.2
Q ss_pred CcEEEEEecCCCCCCCC---CC----CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEE
Q 003024 590 KSRAILFDYDGTVMPQT---SI----NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFM 662 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~---~~----~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I 662 (856)
.+|+++||+||||++-. .. .+..+.+--.+++.| ++.|+.++|+|+++...+...+.. +++.
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L-~~~Gi~laIiT~k~~~~~~~~l~~---lgi~------- 74 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVL-QLCGIDVAIITSKKSGAVRHRAEE---LKIK------- 74 (169)
T ss_pred cCeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHH-HHCCCEEEEEECCCcHHHHHHHHH---CCCc-------
Confidence 38999999999999821 01 123456667788887 778999999999998888887733 2210
Q ss_pred EeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEE
Q 003024 663 RWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAV 742 (856)
Q Consensus 663 ~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v 742 (856)
.|.. +
T Consensus 75 ------~~f~-------------------------~-------------------------------------------- 79 (169)
T TIGR02726 75 ------RFHE-------------------------G-------------------------------------------- 79 (169)
T ss_pred ------EEEe-------------------------c--------------------------------------------
Confidence 0000 0
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----
Q 003024 743 KSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---- 818 (856)
Q Consensus 743 ~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---- 818 (856)
++ .|...++.+++++ +++++++++|||+.||++|++.+|.+ ++++++
T Consensus 80 --------~k----pkp~~~~~~~~~l---~~~~~ev~~iGD~~nDi~~~~~ag~~--------------~am~nA~~~l 130 (169)
T TIGR02726 80 --------IK----KKTEPYAQMLEEM---NISDAEVCYVGDDLVDLSMMKRVGLA--------------VAVGDAVADV 130 (169)
T ss_pred --------CC----CCHHHHHHHHHHc---CcCHHHEEEECCCHHHHHHHHHCCCe--------------EECcCchHHH
Confidence 01 2667888999998 99999999999999999999999964 555553
Q ss_pred ccccceEcCC--h-hHHHHHHHHHHHhcC
Q 003024 819 PSKAKYYLDD--A-AEVVTMLEALAEASA 844 (856)
Q Consensus 819 ~s~A~y~l~~--~-~eV~~~L~~L~~~~~ 844 (856)
+..|+|++.. . ..+.++++.+.+...
T Consensus 131 k~~A~~I~~~~~~~g~v~e~~e~il~~~~ 159 (169)
T TIGR02726 131 KEAAAYVTTARGGHGAVREVAELILKAQG 159 (169)
T ss_pred HHhCCEEcCCCCCCCHHHHHHHHHHHhcC
Confidence 5788998742 2 346777777776543
No 135
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.76 E-value=2.8e-08 Score=94.06 Aligned_cols=55 Identities=18% Similarity=0.284 Sum_probs=45.6
Q ss_pred EEEEecCCCCCCCCC-----CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003024 593 AILFDYDGTVMPQTS-----INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 593 lI~~DlDGTLl~~~~-----~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
+++||+||||++..+ ....+.+.+.+.|++| ++.|+.++|+||+....+..+++.
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~ivS~~~~~~~~~~~~~ 60 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKEL-KEKGIKLALATNKSRREVLELLEE 60 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHH-HHCCCeEEEEeCchHHHHHHHHHH
Confidence 489999999998332 1137889999999997 667999999999999999998854
No 136
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=98.74 E-value=5.7e-07 Score=105.37 Aligned_cols=272 Identities=12% Similarity=0.115 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHHHH----cCCCCCEEE--EeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCc--hHHHHHH
Q 003024 182 YVSANKIFSQRVIEV----INPEDDYVW--IHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPV--REEILKA 253 (856)
Q Consensus 182 Y~~vN~~fa~~i~~~----~~~~~D~Vw--ihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~--r~eil~~ 253 (856)
|...+..++..+-+. ..+ +|++. ++.-|... +....|..++.+..|+ =+. |. -+..+..
T Consensus 203 f~~~~eLi~efl~~l~~~~~~~-~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~~-------~~~~y~~~l~~ 269 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVKD-DDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ERN-------RHHTYLDLYES 269 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCCC-CCEEEEEcCchhhhh----HhhcCccceEEEEecc-Ccc-------cccchhhhhhC
Confidence 444444444443333 333 58777 67777766 4444444445556665 111 22 2455666
Q ss_pred hHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc
Q 003024 254 LLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF 333 (856)
Q Consensus 254 ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~ 333 (856)
+-.+|.+-.-|.+-.+........ .. ....|..+|++.=...+ ...++.
T Consensus 270 ~~~~d~iIv~T~~q~~~l~~~~~~----------------~~-~~~~v~~Ip~~~~~~~~--------------~~s~r~ 318 (519)
T TIGR03713 270 LSRADLIIVDREDIERLLEENYRE----------------NY-VEFDISRITPFDTRLRL--------------GQSQQL 318 (519)
T ss_pred hhhcCeEEEcCHHHHHHHHHHhhh----------------cc-cCCcceeeCccceEEec--------------Chhhcc
Confidence 667776665564433322211100 00 11233335555331110 112333
Q ss_pred CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC-c-
Q 003024 334 EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPG-Y- 411 (856)
Q Consensus 334 ~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~-~- 411 (856)
.++.|.+++||| +.|-+...|+|+.++++++|+.. |...|... + .++.+.++++++++|..++... +
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~~-----~-~~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYNN-----D-NDITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEecC-----c-hhHHHHHHHHHHHHHhhhchhhhcc
Confidence 567788888899 99999999999999999999865 66665321 1 2345677777777776643211 0
Q ss_pred --------------------ccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCC
Q 003024 412 --------------------EPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAP 471 (856)
Q Consensus 412 --------------------~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~ 471 (856)
...+.|.+..+..++...|.-|.++|.+|..|||+ +.+||++.|.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~Gi-------------- 452 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGI-------------- 452 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCC--------------
Confidence 03667787777779999999999999999999999 9999999843
Q ss_pred CCceEEecCCcccccccC---CceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCC
Q 003024 472 KKSMLVVSEFIGCSPSLS---GAIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHD 532 (856)
Q Consensus 472 ~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 532 (856)
|.| .-|.++.+. +|.+| .|++++++||...|..+. .........++...+++
T Consensus 453 ---PqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~~~L~~~~-~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 453 ---PQI---NKVETDYVEHNKNGYII--DDISELLKALDYYLDNLK-NWNYSLAYSIKLIDDYS 507 (519)
T ss_pred ---Cee---ecCCceeeEcCCCcEEe--CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhh
Confidence 666 666777773 59999 799999999999998543 22333333344444433
No 137
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=98.74 E-value=3.1e-07 Score=102.31 Aligned_cols=240 Identities=13% Similarity=0.028 Sum_probs=136.0
Q ss_pred HHHHcCCCCCEEEEeCcccch--HHH-HHHh-hcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHH
Q 003024 193 VIEVINPEDDYVWIHDYHLMV--LPT-FLRR-RFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYA 268 (856)
Q Consensus 193 i~~~~~~~~D~VwihDyhl~l--lp~-~lr~-~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~ 268 (856)
++..++++ |+|.+|..-+.. ++. ++++ +..++|+.+++|-=||..-... -.........+-.||.|..++....
T Consensus 58 ~~~~~~~~-Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~-~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPG-DIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSN-YYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCC-CEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhcccc-chhhHHHHHHHHhCCEEEECCHHHH
Confidence 45557774 999998643321 223 2222 1126999999998776421100 0012223444556899998887655
Q ss_pred HHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEEEeccCcccc
Q 003024 269 RHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVLLGVDDMDIF 348 (856)
Q Consensus 269 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~iil~VdRld~~ 348 (856)
+.+.+ .|+. ..++.+.|+..+..... .+....+++.|+++||+...
T Consensus 136 ~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~--------------~~~~~~~~~~i~yaG~l~k~ 181 (333)
T PRK09814 136 DRLVE-----EGLT---------------TDKIIVQGIFDYLNDIE--------------LVKTPSFQKKINFAGNLEKS 181 (333)
T ss_pred HHHHH-----cCCC---------------cCceEeccccccccccc--------------ccccccCCceEEEecChhhc
Confidence 55443 1221 01122233322221000 00112345689999999943
Q ss_pred CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHH
Q 003024 349 KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAA 428 (856)
Q Consensus 349 KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~a 428 (856)
.++ .+..|+ +.|+.+|.. ++.. . ..+.+.+.|.++.+|+.+
T Consensus 182 ~~l----------~~~~~~----~~l~i~G~g-----~~~~-------~-------------~~~~V~f~G~~~~eel~~ 222 (333)
T PRK09814 182 PFL----------KNWSQG----IKLTVFGPN-----PEDL-------E-------------NSANISYKGWFDPEELPN 222 (333)
T ss_pred hHH----------HhcCCC----CeEEEECCC-----cccc-------c-------------cCCCeEEecCCCHHHHHH
Confidence 321 112444 447777642 2211 0 112355678999999999
Q ss_pred HHHhcceeeecccc-----------ccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC---Cceee
Q 003024 429 YYTIAECVVVTAVR-----------DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS---GAIRV 494 (856)
Q Consensus 429 ly~~ADv~vvtS~~-----------EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~V 494 (856)
+|+. |+.+++.-. -.++--..|||||+. |+|++..++.++.+. .|+.|
T Consensus 223 ~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~-----------------PVI~~~~~~~~~~V~~~~~G~~v 284 (333)
T PRK09814 223 ELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGL-----------------PVIVWSKAAIADFIVENGLGFVV 284 (333)
T ss_pred HHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCC-----------------CEEECCCccHHHHHHhCCceEEe
Confidence 9988 666554321 123334778899955 999999999888883 38888
Q ss_pred CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc
Q 003024 495 NPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530 (856)
Q Consensus 495 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 530 (856)
+ +.++++++|... +++++.++.++.++....
T Consensus 285 ~--~~~el~~~l~~~---~~~~~~~m~~n~~~~~~~ 315 (333)
T PRK09814 285 D--SLEELPEIIDNI---TEEEYQEMVENVKKISKL 315 (333)
T ss_pred C--CHHHHHHHHHhc---CHHHHHHHHHHHHHHHHH
Confidence 7 688999998873 455555555555544433
No 138
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.73 E-value=2.7e-07 Score=101.63 Aligned_cols=66 Identities=18% Similarity=0.188 Sum_probs=54.4
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---ccccceEcC--Chh
Q 003024 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---PSKAKYYLD--DAA 830 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~--~~~ 830 (856)
..|+.+++.+++++ |++++++++|||+.||++|++.+|. +|++..+ +..|++.++ +.+
T Consensus 247 k~K~~~L~~la~~l---gi~~~qtIaVGDg~NDl~m~~~AGl--------------giA~nAkp~Vk~~Ad~~i~~~~l~ 309 (322)
T PRK11133 247 QYKADTLTRLAQEY---EIPLAQTVAIGDGANDLPMIKAAGL--------------GIAYHAKPKVNEQAQVTIRHADLM 309 (322)
T ss_pred ccHHHHHHHHHHHc---CCChhhEEEEECCHHHHHHHHHCCC--------------eEEeCCCHHHHhhCCEEecCcCHH
Confidence 46999999999999 9999999999999999999999996 4555323 478999886 567
Q ss_pred HHHHHHHH
Q 003024 831 EVVTMLEA 838 (856)
Q Consensus 831 eV~~~L~~ 838 (856)
+|+.+|-.
T Consensus 310 ~~l~~~~~ 317 (322)
T PRK11133 310 GVLCILSG 317 (322)
T ss_pred HHHHHhcc
Confidence 77776643
No 139
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.66 E-value=4.9e-08 Score=92.85 Aligned_cols=73 Identities=19% Similarity=0.281 Sum_probs=55.1
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--ccccceEcC---ChhH
Q 003024 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--PSKAKYYLD---DAAE 831 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~s~A~y~l~---~~~e 831 (856)
+|-.+.+.|++++ ++.++++.++||+.||+++|+.+|.+ |+++-+.. .+.|.|++. ....
T Consensus 83 dK~~a~~~L~~~~---~l~~e~~ayiGDD~~Dlpvm~~vGls------------~a~~dAh~~v~~~a~~Vt~~~GG~GA 147 (170)
T COG1778 83 DKLAAFEELLKKL---NLDPEEVAYVGDDLVDLPVMEKVGLS------------VAVADAHPLLKQRADYVTSKKGGEGA 147 (170)
T ss_pred hHHHHHHHHHHHh---CCCHHHhhhhcCccccHHHHHHcCCc------------ccccccCHHHHHhhHhhhhccCcchH
Confidence 3778888999999 99999999999999999999999964 44444432 578999884 3455
Q ss_pred HHHHHHHHHHhcC
Q 003024 832 VVTMLEALAEASA 844 (856)
Q Consensus 832 V~~~L~~L~~~~~ 844 (856)
|.++.+-+...+.
T Consensus 148 vREv~dlil~aq~ 160 (170)
T COG1778 148 VREVCDLILQAQG 160 (170)
T ss_pred HHHHHHHHHHccC
Confidence 6666666555443
No 140
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.56 E-value=2.1e-07 Score=97.44 Aligned_cols=85 Identities=21% Similarity=0.252 Sum_probs=65.5
Q ss_pred hcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEE
Q 003024 735 LANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACT 814 (856)
Q Consensus 735 l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~ 814 (856)
+..+...+..+.....-+| +...+..+++.+ |.+++++++|||+.+|+.|-+.+|.. +++|+
T Consensus 128 l~~~F~~i~g~~~~~~~KP----~P~~l~~~~~~~---~~~~~~~l~VGDs~~Di~aA~~Ag~~-----------~v~v~ 189 (220)
T COG0546 128 LADYFDVIVGGDDVPPPKP----DPEPLLLLLEKL---GLDPEEALMVGDSLNDILAAKAAGVP-----------AVGVT 189 (220)
T ss_pred CccccceEEcCCCCCCCCc----CHHHHHHHHHHh---CCChhheEEECCCHHHHHHHHHcCCC-----------EEEEE
Confidence 3344444444455555566 678888889988 88888999999999999999999952 47899
Q ss_pred eCCC------ccccceEcCChhHHHHHHH
Q 003024 815 VGQK------PSKAKYYLDDAAEVVTMLE 837 (856)
Q Consensus 815 vG~~------~s~A~y~l~~~~eV~~~L~ 837 (856)
+|.. ...|++++++..++...|.
T Consensus 190 ~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 190 WGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred CCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 9852 3668999999999888775
No 141
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.47 E-value=1.6e-07 Score=98.87 Aligned_cols=66 Identities=14% Similarity=0.077 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--c-----cccceEcCChh
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--P-----SKAKYYLDDAA 830 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~-----s~A~y~l~~~~ 830 (856)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. +++|+.|.. + ..|.|.++++.
T Consensus 153 ~p~~~~~~~~~l---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~i~~~~ 218 (229)
T PRK13226 153 HPLPLLVAAERI---GVAPTDCVYVGDDERDILAARAAGMP-----------SVAALWGYRLHDDDPLAWQADVLVEQPQ 218 (229)
T ss_pred CHHHHHHHHHHh---CCChhhEEEeCCCHHHHHHHHHCCCc-----------EEEEeecCCCCCcChhhcCCCeeeCCHH
Confidence 667789999999 99999999999999999999999973 467777752 1 24889999999
Q ss_pred HHHHHHH
Q 003024 831 EVVTMLE 837 (856)
Q Consensus 831 eV~~~L~ 837 (856)
++.+.|.
T Consensus 219 el~~~~~ 225 (229)
T PRK13226 219 LLWNPAT 225 (229)
T ss_pred HHHHHhc
Confidence 9888765
No 142
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.44 E-value=4.3e-06 Score=89.61 Aligned_cols=59 Identities=15% Similarity=0.267 Sum_probs=45.7
Q ss_pred cEEEEEecCCCCCCCCCCCC---CCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCcc
Q 003024 591 SRAILFDYDGTVMPQTSINK---APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLG 653 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~---~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lg 653 (856)
.|+|+||+||||++ .+. .+.+.+.++|++| ++.|..++++|||+..........+..+|
T Consensus 1 ~k~i~~D~DGtl~~---~~~~~~~~~~~a~~al~~l-~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g 62 (257)
T TIGR01458 1 VKGVLLDISGVLYI---SDAKSGVAVPGSQEAVKRL-RGASVKVRFVTNTTKESKQDLLERLQRLG 62 (257)
T ss_pred CCEEEEeCCCeEEe---CCCcccCcCCCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHHHcC
Confidence 47999999999998 444 3788999999997 88899999999988876444443333333
No 143
>PRK10444 UMP phosphatase; Provisional
Probab=98.44 E-value=4.9e-06 Score=88.62 Aligned_cols=59 Identities=12% Similarity=0.193 Sum_probs=49.7
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccE
Q 003024 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGI 654 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgl 654 (856)
+|+|+||+||||+. .+ ++.+.+.++|++| ++.|.+++++|+|+......+...+..+|+
T Consensus 1 ~~~v~~DlDGtL~~---~~-~~~p~a~~~l~~L-~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 1 IKNVICDIDGVLMH---DN-VAVPGAAEFLHRI-LDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CcEEEEeCCCceEe---CC-eeCccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 57999999999998 44 7889999999998 788999999999999887777765555554
No 144
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.44 E-value=2.3e-05 Score=95.02 Aligned_cols=182 Identities=12% Similarity=0.097 Sum_probs=115.8
Q ss_pred eEEEeccCccccCCHHHHHHHHHHHHH--hCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003024 337 TVLLGVDDMDIFKGVDLKLLAMEHLLK--QHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (856)
Q Consensus 337 ~iil~VdRld~~KGi~~~l~A~~~ll~--~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pv 414 (856)
.+|.++.|+...|+..+++..++++++ .+|+ ..+.+|..|...-.+... +++.+++.+++++ -+|. + .|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~g-K~iIk~i~~~a~~--p~~~--~--kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEPG-KELIQEIVEFSRR--PEFR--G--RI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchHH-HHHHHHHHHHHhC--cCCC--C--cE
Confidence 378999999999999999999999865 3444 247777777543222111 3344455554431 0221 1 35
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccc--cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc---C
Q 003024 415 VFIDKPVTLSERAAYYTIAECVVVTAV--RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL---S 489 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~--~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~ 489 (856)
+++. ..+..--..++..|||++.||. .|.=|+.-+-|+. .|.|-+|-.-|.-.+- .
T Consensus 550 vfle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~------------------NG~LnlSvlDGww~E~~~g~ 610 (778)
T cd04299 550 VFLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAAL------------------NGGLNLSVLDGWWDEGYDGE 610 (778)
T ss_pred EEEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHH------------------cCCeeeecccCccccccCCC
Confidence 5555 4455555578999999999999 7887777777666 3678888887765555 2
Q ss_pred CceeeCC------------CCHHHHHHHHHHHHc----------CCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHH
Q 003024 490 GAIRVNP------------WNIEATAEAMHEAIQ----------MNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDMER 546 (856)
Q Consensus 490 ~al~VnP------------~d~~~~A~ai~~aL~----------m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 546 (856)
+|+.+.+ .|.+++-+.|.+.+- .|..-.+.+.+.+......+++.+-++.++..+..
T Consensus 611 nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~ 689 (778)
T cd04299 611 NGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYL 689 (778)
T ss_pred CceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHH
Confidence 4888877 455555566654432 12222222223344444568888888888887764
No 145
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.41 E-value=9.9e-07 Score=91.72 Aligned_cols=69 Identities=16% Similarity=0.227 Sum_probs=57.1
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEcCChh
Q 003024 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYLDDAA 830 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~~~~ 830 (856)
-|...++++++++ +.+++++++|||+.+|+.+.+.+|.. +++|+.|.. ...|+|++++..
T Consensus 139 p~p~~~~~~~~~~---~~~~~~~~~iGDs~~Di~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~~~~~i~~~~ 204 (214)
T PRK13288 139 PDPEPVLKALELL---GAKPEEALMVGDNHHDILAGKNAGTK-----------TAGVAWTIKGREYLEQYKPDFMLDKMS 204 (214)
T ss_pred CCcHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHhhcCcCEEECCHH
Confidence 3788999999999 99999999999999999999999973 467777743 235889999999
Q ss_pred HHHHHHHHH
Q 003024 831 EVVTMLEAL 839 (856)
Q Consensus 831 eV~~~L~~L 839 (856)
++.+++..+
T Consensus 205 ~l~~~i~~~ 213 (214)
T PRK13288 205 DLLAIVGDM 213 (214)
T ss_pred HHHHHHhhc
Confidence 988877543
No 146
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.41 E-value=1.8e-05 Score=91.27 Aligned_cols=353 Identities=16% Similarity=0.235 Sum_probs=160.5
Q ss_pred cccccccccccCCCCCCCCCCcChHhHHH--HHHHHHHHHHHHHHHcCCCC-CEEEEeCcccchHHHHHHhhcCCCeEEE
Q 003024 153 KQHLWPLFHYMLPFSATHGGRFDRSLWEA--YVSANKIFSQRVIEVINPED-DYVWIHDYHLMVLPTFLRRRFTRLRMGF 229 (856)
Q Consensus 153 ~~~lWpl~H~~~~~~~~~~~~~~~~~w~~--Y~~vN~~fa~~i~~~~~~~~-D~VwihDyhl~llp~~lr~~~~~~~i~~ 229 (856)
+.-||-.|+--.+ ..+.+..++ +--+-..|.+.+.+...... =+.+.|.+..-+-..++|++.|++.-.|
T Consensus 100 k~~lW~~~gIdS~-------~~~~dynea~~Fgyava~fi~~f~~~~~~~~~ViaHfHEWmaG~gll~lr~~~~~VaTvF 172 (633)
T PF05693_consen 100 KGELWELFGIDSP-------HGDGDYNEAVMFGYAVAWFIEEFYKFYEEKPKVIAHFHEWMAGVGLLYLRKRKPDVATVF 172 (633)
T ss_dssp HHHHHHHH------------TT-HHHHHHHHHHHHHHHHHHHHHHH-S-SEEEEEEEESGGGTTHHHHHHHTT-SCEEEE
T ss_pred HHHHHHHcCCCCC-------CCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcEEEEechHhHhHHHHHHhccCCCeeEEE
Confidence 3558888875432 122222221 22223444454554443211 2456777776666678999999999999
Q ss_pred EEccCCC-------ChHHHhcCCc--hHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCcee---eEEECCE
Q 003024 230 FLHSPFP-------SSEIYRTLPV--REEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYI---GLEYYGR 297 (856)
Q Consensus 230 flH~PfP-------~~e~~~~lp~--r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~---~~~~~gr 297 (856)
+.|.--+ ..++|..|+. .++...- -.-+.+|.++.+.....--..+-...- .-..-+|
T Consensus 173 TTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~----------~~i~~k~~iEraaA~~AdvFTTVSeITa~Ea~~LL~r 242 (633)
T PF05693_consen 173 TTHATLLGRYLAANNKDFYNNLDKFNGDQEAGE----------RNIYHKHSIERAAAHYADVFTTVSEITAKEAEHLLKR 242 (633)
T ss_dssp EESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHH----------TT-HHHHHHHHHHHHHSSEEEESSHHHHHHHHHHHSS
T ss_pred EecccchhhHhhcCCCcHHHHhhccCccccccC----------ccchHHHHHHHHHHHhcCeeeehhhhHHHHHHHHhCC
Confidence 9995432 1223333331 1111100 001244444332111100000000000 0001122
Q ss_pred EEEEEEeecccCchHHHHHhc----CchHHHHHHHH-HHHc-------CCCe-EEEeccCcc-ccCCHHHHHHHHHHHHH
Q 003024 298 TVGIKIMPVGIHMGQIESVLR----LADKDWRVQEL-KQQF-------EGKT-VLLGVDDMD-IFKGVDLKLLAMEHLLK 363 (856)
Q Consensus 298 ~~~i~i~p~GId~~~~~~~~~----~~~~~~~~~~l-~~~~-------~~k~-iil~VdRld-~~KGi~~~l~A~~~ll~ 363 (856)
..-| |.|+|+|...|..... ....++++.++ +..+ .++. ++...||.+ ..||++..|+|+.+|-.
T Consensus 243 ~pDv-V~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~ 321 (633)
T PF05693_consen 243 KPDV-VTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNH 321 (633)
T ss_dssp --SE-E----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHH
T ss_pred CCCE-EcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHH
Confidence 2222 4699999887643211 01223344443 3333 1344 556689999 57999999999988743
Q ss_pred ---hCCCCcCceEEEEEecCCCCCchh---------HHHHHHHHHHHHHHHhccc------CC-CC--------------
Q 003024 364 ---QHPKWQGRAVLVQIANPARGRGKD---------LEEIQAEIHATCKRINETF------GR-PG-------------- 410 (856)
Q Consensus 364 ---~~p~~~~~vvLvqi~~p~r~~~~~---------~~~l~~~~~~lv~~IN~~~------~~-~~-------------- 410 (856)
.... +.-|+..|..|+....-. +.++++.+.++.++|..+. |. ++
T Consensus 322 ~lk~~~~--~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lk 399 (633)
T PF05693_consen 322 RLKQAGS--DKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLK 399 (633)
T ss_dssp HHHHTT---S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHH
T ss_pred HHhhcCC--CCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHH
Confidence 2211 223333344455433211 2333333333333332211 11 00
Q ss_pred ------------------------------------------cccEEEEcCCCC------HHHHHHHHHhcceeeecccc
Q 003024 411 ------------------------------------------YEPVVFIDKPVT------LSERAAYYTIAECVVVTAVR 442 (856)
Q Consensus 411 ------------------------------------------~~pvv~~~~~v~------~~el~aly~~ADv~vvtS~~ 442 (856)
-..|+|....++ .-++..+.+.+|++|+||.+
T Consensus 400 r~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYY 479 (633)
T PF05693_consen 400 RCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYY 479 (633)
T ss_dssp HHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SS
T ss_pred HHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeecccc
Confidence 124555443322 33677889999999999999
Q ss_pred ccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc--------CCceee-CC--CCH----HHHHHHHH
Q 003024 443 DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL--------SGAIRV-NP--WNI----EATAEAMH 507 (856)
Q Consensus 443 EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--------~~al~V-nP--~d~----~~~A~ai~ 507 (856)
|.+|.+|+|++|. +.|-|.|+.+|....+ ..|+.| +- .|. +++|+.|.
T Consensus 480 EPWGYTPlE~~a~-----------------gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~ 542 (633)
T PF05693_consen 480 EPWGYTPLECTAF-----------------GVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLY 542 (633)
T ss_dssp BSS-HHHHHHHHT-----------------T--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHH
T ss_pred ccccCChHHHhhc-----------------CCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 9999999999998 4499999999976443 125544 32 334 55666666
Q ss_pred HHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHH
Q 003024 508 EAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (856)
Q Consensus 508 ~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (856)
....|+..+|.....+..+.-..-+|.+-...+.+
T Consensus 543 ~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~ 577 (633)
T PF05693_consen 543 KFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEK 577 (633)
T ss_dssp HHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 67778887776665554444444566555444433
No 147
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.40 E-value=5e-07 Score=89.30 Aligned_cols=52 Identities=13% Similarity=0.264 Sum_probs=45.3
Q ss_pred EEEEecCCCCCCCCCCC-----------CCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHH---HhhcC
Q 003024 593 AILFDYDGTVMPQTSIN-----------KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLG---KWFSP 648 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~-----------~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~---~~~~~ 648 (856)
++++|+||||++ ++ ..+++.+.++++++ +++|+.|+++|||+..... +|+..
T Consensus 1 iVisDIDGTL~~---sd~~~~~~~~~~~~~~~~~~~~a~~~l-~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 1 IVISDIDGTITK---SDVLGHVVPIIGKDWTHPGVAKLYRDI-QNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CEEEecCCCCcc---cccccccccccccCcCCHHHHHHHHHH-HHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 589999999998 55 67899999999997 8899999999999998874 66644
No 148
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.33 E-value=2.8e-06 Score=91.72 Aligned_cols=70 Identities=19% Similarity=0.320 Sum_probs=59.5
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEcCChh
Q 003024 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYLDDAA 830 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~~~~ 830 (856)
.|..++..+++++ +++++++++|||+.+|+.+-+.+|.. ++.|..|.. ...|.|++++..
T Consensus 196 ~k~~~~~~~l~~~---~~~p~~~l~IGDs~~Di~aA~~AG~~-----------~I~v~~g~~~~~~l~~~~ad~~i~~~~ 261 (273)
T PRK13225 196 SKRRALSQLVARE---GWQPAAVMYVGDETRDVEAARQVGLI-----------AVAVTWGFNDRQSLVAACPDWLLETPS 261 (273)
T ss_pred CCHHHHHHHHHHh---CcChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCHHHHHHCCCCEEECCHH
Confidence 4778899999998 99999999999999999999999973 467777743 246899999999
Q ss_pred HHHHHHHHHH
Q 003024 831 EVVTMLEALA 840 (856)
Q Consensus 831 eV~~~L~~L~ 840 (856)
++..++..|.
T Consensus 262 eL~~~~~~~~ 271 (273)
T PRK13225 262 DLLQAVTQLM 271 (273)
T ss_pred HHHHHHHHHh
Confidence 9999888775
No 149
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.32 E-value=3.4e-06 Score=87.49 Aligned_cols=42 Identities=21% Similarity=0.320 Sum_probs=38.5
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 754 QGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
.+-.|..+++.+++.+ |+++++++++|||.||.+||+.+|..
T Consensus 141 ~~~~K~~~l~~~~~~~---g~~~~~~~a~gDs~nDlpml~~ag~~ 182 (212)
T COG0560 141 DGEGKAKALRELAAEL---GIPLEETVAYGDSANDLPMLEAAGLP 182 (212)
T ss_pred CcchHHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHhCCCC
Confidence 4557999999999999 99999999999999999999999963
No 150
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.31 E-value=4.2e-05 Score=87.03 Aligned_cols=134 Identities=16% Similarity=0.096 Sum_probs=83.6
Q ss_pred CCeEE--EeccCccc-cCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003024 335 GKTVL--LGVDDMDI-FKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGY 411 (856)
Q Consensus 335 ~k~ii--l~VdRld~-~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~ 411 (856)
++++| ++.+|..+ .|++...++|++.+.+++|+++ ++..+.+. ... +.++++....+. +.
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~----~~~~~~~~~~~~-----~~ 252 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRR----LQFEQIKAEYGP-----DL 252 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhH----HHHHHHHHHhCC-----CC
Confidence 45544 45569887 7999999999999999998765 44333221 111 122222222211 11
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEec------------
Q 003024 412 EPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS------------ 479 (856)
Q Consensus 412 ~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~S------------ 479 (856)
.+..+.+ +...+|++||++|.+| |.+.+|+++|+. |+|++
T Consensus 253 -~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~-----------------P~Vv~yk~~pl~~~~~~ 304 (385)
T TIGR00215 253 -QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKT-----------------PMVVGYRMKPLTFLIAR 304 (385)
T ss_pred -cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCC-----------------CEEEEEcCCHHHHHHHH
Confidence 2444433 3457999999999999 667779999966 55555
Q ss_pred -----CCcccccccCC-c----eeeCCCCHHHHHHHHHHHHcCC
Q 003024 480 -----EFIGCSPSLSG-A----IRVNPWNIEATAEAMHEAIQMN 513 (856)
Q Consensus 480 -----e~~G~~~~l~~-a----l~VnP~d~~~~A~ai~~aL~m~ 513 (856)
.+.+....+.+ + ++-+-.+++.+++++.+.|+.+
T Consensus 305 ~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 305 RLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 13333333422 1 2224457899999999999865
No 151
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.31 E-value=4e-06 Score=89.44 Aligned_cols=53 Identities=15% Similarity=0.273 Sum_probs=44.5
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecC---CChhhHHHhhcC
Q 003024 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSG---RGRDCLGKWFSP 648 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TG---R~~~~l~~~~~~ 648 (856)
.|+|++|+||||++ .+..++ .+.++|++| ++.|+.|+++|| |+...+.+.+..
T Consensus 1 ~~~~~~D~DGtl~~---~~~~i~-~a~~~l~~l-~~~g~~~~~~Tnn~~r~~~~~~~~l~~ 56 (249)
T TIGR01457 1 YKGYLIDLDGTMYK---GKERIP-EAETFVHEL-QKRDIPYLFVTNNSTRTPESVAEMLAS 56 (249)
T ss_pred CCEEEEeCCCceEc---CCeeCc-CHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 36899999999998 555454 789999997 888999999995 889888887754
No 152
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.30 E-value=9e-07 Score=92.55 Aligned_cols=80 Identities=23% Similarity=0.290 Sum_probs=60.7
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--
Q 003024 741 AVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK-- 818 (856)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-- 818 (856)
.+..+..+-+.+| |..+++.+++++ +++++++++|||+.+|+++.+.+|.. ++.|..|..
T Consensus 138 ~~~~~~~~~~~kp----~~~~~~~~~~~~---~~~~~~~i~igD~~~Di~~a~~~g~~-----------~i~v~~g~~~~ 199 (226)
T PRK13222 138 VVIGGDSLPNKKP----DPAPLLLACEKL---GLDPEEMLFVGDSRNDIQAARAAGCP-----------SVGVTYGYNYG 199 (226)
T ss_pred EEEcCCCCCCCCc----ChHHHHHHHHHc---CCChhheEEECCCHHHHHHHHHCCCc-----------EEEECcCCCCc
Confidence 3444443333444 678899999999 99999999999999999999999973 356666642
Q ss_pred ----ccccceEcCChhHHHHHHHH
Q 003024 819 ----PSKAKYYLDDAAEVVTMLEA 838 (856)
Q Consensus 819 ----~s~A~y~l~~~~eV~~~L~~ 838 (856)
...+.|++++..++..+|..
T Consensus 200 ~~~~~~~~~~~i~~~~~l~~~l~~ 223 (226)
T PRK13222 200 EPIALSEPDVVIDHFAELLPLLGL 223 (226)
T ss_pred cchhhcCCCEEECCHHHHHHHHHH
Confidence 23577999999998887753
No 153
>PLN02645 phosphoglycolate phosphatase
Probab=98.29 E-value=1.9e-05 Score=87.19 Aligned_cols=71 Identities=14% Similarity=0.255 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccE
Q 003024 577 LSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGI 654 (856)
Q Consensus 577 l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgl 654 (856)
+..+++.+.-. .+++|+||+||||+. .+ .+-+.+.++|++| ++.|.+++++|+|+......++..+..+|+
T Consensus 16 ~~~~~~~~~~~--~~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~l-r~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 16 LTLENADELID--SVETFIFDCDGVIWK---GD-KLIEGVPETLDML-RSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCHHHHHHHHH--hCCEEEEeCcCCeEe---CC-ccCcCHHHHHHHH-HHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 44444444322 478999999999998 44 4558889999997 888999999999996665555544334443
No 154
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.29 E-value=1.2e-06 Score=94.80 Aligned_cols=70 Identities=19% Similarity=0.172 Sum_probs=56.4
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEcC
Q 003024 754 QGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYLD 827 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~ 827 (856)
.+-.|...++.+++++ |++++++++|||+.+|+.+.+.+|.. +++|+.|.. ...+.++++
T Consensus 155 ~~Kp~p~~~~~~~~~~---g~~~~~~l~IGD~~~Di~aA~~aGi~-----------~i~v~~G~~~~~~l~~~~~~~vi~ 220 (272)
T PRK13223 155 QKKPDPAALLFVMKMA---GVPPSQSLFVGDSRSDVLAAKAAGVQ-----------CVALSYGYNHGRPIAEESPALVID 220 (272)
T ss_pred CCCCCcHHHHHHHHHh---CCChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCchhhhhcCCCEEEC
Confidence 3444778899999999 99999999999999999999999973 467777632 246888999
Q ss_pred ChhHHHHHHH
Q 003024 828 DAAEVVTMLE 837 (856)
Q Consensus 828 ~~~eV~~~L~ 837 (856)
+..++.+++.
T Consensus 221 ~l~el~~~~~ 230 (272)
T PRK13223 221 DLRALLPGCA 230 (272)
T ss_pred CHHHHHHHHh
Confidence 9988876544
No 155
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.28 E-value=7.9e-06 Score=85.20 Aligned_cols=62 Identities=18% Similarity=0.316 Sum_probs=49.3
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---ccccceEcCC--hhH
Q 003024 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---PSKAKYYLDD--AAE 831 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~~--~~e 831 (856)
.|+..++.+++++ +++++++++|||+.+|+++.+.+|.. +.++.. +..|+|++.+ ..+
T Consensus 152 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Di~aa~~ag~~--------------i~~~~~~~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 152 YKGKTLLILLRKE---GISPENTVAVGDGANDLSMIKAAGLG--------------IAFNAKPKLQQKADICINKKDLTD 214 (219)
T ss_pred ccHHHHHHHHHHc---CCCHHHEEEEECCHHHHHHHHhCCCe--------------EEeCCCHHHHHhchhccCCCCHHH
Confidence 4899999999998 99999999999999999999999863 344432 4678888764 455
Q ss_pred HHHH
Q 003024 832 VVTM 835 (856)
Q Consensus 832 V~~~ 835 (856)
++.+
T Consensus 215 ~~~~ 218 (219)
T TIGR00338 215 ILPL 218 (219)
T ss_pred HHhh
Confidence 5554
No 156
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=98.27 E-value=8.5e-06 Score=88.47 Aligned_cols=59 Identities=15% Similarity=0.320 Sum_probs=43.7
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccE
Q 003024 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGI 654 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgl 654 (856)
+++|+||+||||++ ... +.+.+.++|++| +++|..|+++|+|+......++..+..+|+
T Consensus 2 ~~~~~~D~DGtl~~---~~~-~~~ga~e~l~~L-~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~ 60 (279)
T TIGR01452 2 AQGFIFDCDGVLWL---GER-VVPGAPELLDRL-ARAGKAALFVTNNSTKSRAEYALKFARLGF 60 (279)
T ss_pred ccEEEEeCCCceEc---CCe-eCcCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 67999999999998 443 455589999998 788999999999876555444433333443
No 157
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.21 E-value=1.8e-05 Score=81.06 Aligned_cols=38 Identities=24% Similarity=0.422 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003024 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
+|+.+++.+++.+ +++++++++|||+.+|++|++.+|.
T Consensus 147 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~D~~~a~~ag~ 184 (201)
T TIGR01491 147 NKGEAVERLKREL---NPSLTETVAVGDSKNDLPMFEVADI 184 (201)
T ss_pred cHHHHHHHHHHHh---CCCHHHEEEEcCCHhHHHHHHhcCC
Confidence 5999999999988 9999999999999999999999996
No 158
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.20 E-value=1e-06 Score=91.22 Aligned_cols=64 Identities=16% Similarity=0.135 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEcCChhH
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYLDDAAE 831 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~~~~e 831 (856)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. ++.|..|.. ...|.|++++..+
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~~~igDs~~d~~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~a~~~i~~~~~ 208 (213)
T TIGR01449 143 HPDPLLLAAERL---GVAPQQMVYVGDSRVDIQAARAAGCP-----------SVLLTYGYRYGEAIDLLPPDVLYDSLNE 208 (213)
T ss_pred ChHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHCCCe-----------EEEEccCCCCCcchhhcCCCeEeCCHHH
Confidence 577899999999 99999999999999999999999973 355655642 2468889999888
Q ss_pred HHHH
Q 003024 832 VVTM 835 (856)
Q Consensus 832 V~~~ 835 (856)
+..+
T Consensus 209 l~~~ 212 (213)
T TIGR01449 209 LPPL 212 (213)
T ss_pred HHhh
Confidence 7654
No 159
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.18 E-value=0.00075 Score=75.15 Aligned_cols=299 Identities=21% Similarity=0.293 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCEEEEeCcc----cchHHHH--HHhhcCCCeEEEEEccC---------CCChHHHhcCCch
Q 003024 183 VSANKIFSQRVIEVINPEDDYVWIHDYH----LMVLPTF--LRRRFTRLRMGFFLHSP---------FPSSEIYRTLPVR 247 (856)
Q Consensus 183 ~~vN~~fa~~i~~~~~~~~D~VwihDyh----l~llp~~--lr~~~~~~~i~~flH~P---------fP~~e~~~~lp~r 247 (856)
.+.+++|+ .......|++..||+|-=- ...+|-. ||+++|+.+|..+.-+| |+..-..+-+|..
T Consensus 32 ~r~~eRfg-~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFG-FYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhc-ccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 45677777 1223345667899999655 3445544 89999999999888765 2222222334422
Q ss_pred H-HHHHHhH---hCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEE---------------------EEEE
Q 003024 248 E-EILKALL---NADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRT---------------------VGIK 302 (856)
Q Consensus 248 ~-eil~~ll---~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~---------------------~~i~ 302 (856)
. -..+..| ..|+.-|---+.=-|++..|.+. |+. .+-.|+|- +..-
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p--------~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li 181 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIP--------LVLVNARLSDRSFARYAKLKFLARLLFKNIDLI 181 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCC--------EEEEeeeechhhhHHHHHHHHHHHHHHHhccee
Confidence 1 1122222 33444443333334444444331 111 01111111 0111
Q ss_pred EeecccCchHHHHHh---------------cCchHHHHHHHHHHHcCC-CeEEEeccCccccCCHH-HHHHHHHHHHHhC
Q 003024 303 IMPVGIHMGQIESVL---------------RLADKDWRVQELKQQFEG-KTVLLGVDDMDIFKGVD-LKLLAMEHLLKQH 365 (856)
Q Consensus 303 i~p~GId~~~~~~~~---------------~~~~~~~~~~~l~~~~~~-k~iil~VdRld~~KGi~-~~l~A~~~ll~~~ 365 (856)
+.-.-+|.++|...- ..+........+|.++++ +++++..+. ..|=. ..+.|+..+++++
T Consensus 182 ~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaST---H~GEeei~l~~~~~l~~~~ 258 (419)
T COG1519 182 LAQSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAAST---HEGEEEIILDAHQALKKQF 258 (419)
T ss_pred eecCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecC---CCchHHHHHHHHHHHHhhC
Confidence 122233333333221 123344566778888877 899998887 33444 4788999999999
Q ss_pred CCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC-------CcccEEEEcCCCCHHHHHHHHHhcceeee
Q 003024 366 PKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP-------GYEPVVFIDKPVTLSERAAYYTIAECVVV 438 (856)
Q Consensus 366 p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~-------~~~pvv~~~~~v~~~el~aly~~ADv~vv 438 (856)
|+.. |+ ++ | +.++ =-..+++++++.|-+++.- ..++|++.+ +.-|+..||++||++.|
T Consensus 259 ~~~l----lI-lV-P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~D---tmGEL~l~y~~adiAFV 323 (419)
T COG1519 259 PNLL----LI-LV-P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGD---TMGELGLLYGIADIAFV 323 (419)
T ss_pred CCce----EE-Ee-c---CChh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEe---cHhHHHHHHhhccEEEE
Confidence 9753 33 33 2 3333 3467888888888776431 223555444 36899999999999876
Q ss_pred ccc---cccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCC----ccccccc---CCceeeCCCCHHHHHHHHHH
Q 003024 439 TAV---RDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF----IGCSPSL---SGAIRVNPWNIEATAEAMHE 508 (856)
Q Consensus 439 tS~---~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~----~G~~~~l---~~al~VnP~d~~~~A~ai~~ 508 (856)
--. .-|.| ++|..+++. |+|.-.+ .-+.+.| ++++.|+. .+.++.++..
T Consensus 324 GGSlv~~GGHN--~LEpa~~~~-----------------pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v~~ 382 (419)
T COG1519 324 GGSLVPIGGHN--PLEPAAFGT-----------------PVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAVEL 382 (419)
T ss_pred CCcccCCCCCC--hhhHHHcCC-----------------CEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHHHH
Confidence 543 33444 689999843 7776543 3344444 24677764 7788888877
Q ss_pred HHcCCHHHHHHHHHHHhhhhhcC
Q 003024 509 AIQMNEAEKQLRHEKHYRYVSTH 531 (856)
Q Consensus 509 aL~m~~~er~~r~~~~~~~v~~~ 531 (856)
.++. +.+|+.+.++....+.++
T Consensus 383 l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 383 LLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred hcCC-HHHHHHHHHHHHHHHHHh
Confidence 7764 777777777778777765
No 160
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.17 E-value=5.5e-06 Score=83.09 Aligned_cols=41 Identities=22% Similarity=0.439 Sum_probs=36.9
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHc
Q 003024 752 KPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEII 795 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a 795 (856)
.+.+.+|+.+++.+++.+ +++++++++|||+.||++|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~---~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEES---KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHh---CCCHHHEEEEeCCHHHHHHHhcC
Confidence 366788999999999888 89999999999999999999864
No 161
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=98.14 E-value=2.1e-05 Score=84.82 Aligned_cols=72 Identities=13% Similarity=0.077 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHhhhcCCC-cceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------------------
Q 003024 758 KGVVAEKIFTTMAESGRH-ADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------------------ 818 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------------ 818 (856)
+...+..+++++ |+. ++++++|||+.+|+.+-+.+|.. +++|+.|..
T Consensus 160 ~p~~~~~a~~~l---~~~~~~e~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~ 225 (267)
T PRK13478 160 YPWMALKNAIEL---GVYDVAACVKVDDTVPGIEEGLNAGMW-----------TVGVILSGNELGLSEEEYQALSAAELA 225 (267)
T ss_pred ChHHHHHHHHHc---CCCCCcceEEEcCcHHHHHHHHHCCCE-----------EEEEccCcccccCCHHHHHhcCHHHHH
Confidence 567788888988 885 69999999999999999999973 467777642
Q ss_pred -----------ccccceEcCChhHHHHHHHHHHHhc
Q 003024 819 -----------PSKAKYYLDDAAEVVTMLEALAEAS 843 (856)
Q Consensus 819 -----------~s~A~y~l~~~~eV~~~L~~L~~~~ 843 (856)
...|.+++++..++..+|+.+....
T Consensus 226 ~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~~~ 261 (267)
T PRK13478 226 ARRERARARLRAAGAHYVIDTIADLPAVIADIEARL 261 (267)
T ss_pred HHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHHHH
Confidence 2458899999999999887765433
No 162
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.10 E-value=7.1e-06 Score=87.52 Aligned_cols=77 Identities=18% Similarity=0.121 Sum_probs=57.3
Q ss_pred CCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeC
Q 003024 737 NEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVG 816 (856)
Q Consensus 737 ~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG 816 (856)
++...++.+...-.-+| +......+++++ +++++++++|||+.+|+..-+.+|.. +++|..|
T Consensus 149 ~~Fd~iv~~~~~~~~KP----~p~~~~~a~~~~---~~~~~~~l~vgDs~~Di~aA~~aGi~-----------~i~v~~g 210 (248)
T PLN02770 149 DFFQAVIIGSECEHAKP----HPDPYLKALEVL---KVSKDHTFVFEDSVSGIKAGVAAGMP-----------VVGLTTR 210 (248)
T ss_pred hhCcEEEecCcCCCCCC----ChHHHHHHHHHh---CCChhHEEEEcCCHHHHHHHHHCCCE-----------EEEEeCC
Confidence 33334444443333355 677889999999 99999999999999999999999973 4567666
Q ss_pred CC-----ccccceEcCChhH
Q 003024 817 QK-----PSKAKYYLDDAAE 831 (856)
Q Consensus 817 ~~-----~s~A~y~l~~~~e 831 (856)
.. ...|.+++++..+
T Consensus 211 ~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 211 NPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred CCHHHHhhcCCCEEeccchh
Confidence 42 2468899988877
No 163
>PLN02954 phosphoserine phosphatase
Probab=98.09 E-value=3.7e-05 Score=80.45 Aligned_cols=66 Identities=20% Similarity=0.303 Sum_probs=49.1
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEcC
Q 003024 754 QGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYLD 827 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~ 827 (856)
.+..|..+++.+++++ +. +++++|||+.||+.|.+.++.. +.+++|.. ...|+|+++
T Consensus 152 ~~~~K~~~i~~~~~~~---~~--~~~i~iGDs~~Di~aa~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~ 214 (224)
T PLN02954 152 RSGGKAEAVQHIKKKH---GY--KTMVMIGDGATDLEARKPGGAD------------LFIGYGGVQVREAVAAKADWFVT 214 (224)
T ss_pred CCccHHHHHHHHHHHc---CC--CceEEEeCCHHHHHhhhcCCCC------------EEEecCCCccCHHHHhcCCEEEC
Confidence 3456999999998877 54 6899999999999997776542 34555532 235889999
Q ss_pred ChhHHHHHH
Q 003024 828 DAAEVVTML 836 (856)
Q Consensus 828 ~~~eV~~~L 836 (856)
+..++.++|
T Consensus 215 ~~~el~~~~ 223 (224)
T PLN02954 215 DFQDLIEVL 223 (224)
T ss_pred CHHHHHHhh
Confidence 998887754
No 164
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.04 E-value=8e-06 Score=77.16 Aligned_cols=51 Identities=22% Similarity=0.296 Sum_probs=41.3
Q ss_pred EEEEEecCCCCCCCCC---CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHH
Q 003024 592 RAILFDYDGTVMPQTS---INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLG 643 (856)
Q Consensus 592 rlI~~DlDGTLl~~~~---~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~ 643 (856)
|+|++|+||||+.... ....+.++++++|++| ++.|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l-~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHY-KALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHH-HHCCCEEEEECCCCchhhh
Confidence 7999999999997321 1134779999999997 7789999999999987654
No 165
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=98.00 E-value=1.3e-05 Score=71.42 Aligned_cols=87 Identities=20% Similarity=0.258 Sum_probs=71.4
Q ss_pred eeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC-C--ceeeCCCCHHHHHHHHHHHHc
Q 003024 435 CVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G--AIRVNPWNIEATAEAMHEAIQ 511 (856)
Q Consensus 435 v~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--al~VnP~d~~~~A~ai~~aL~ 511 (856)
+++.|+..+|++...+|+||| ++|+|.+...+..+.+. + ++.++ |++++++++..+|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~-----------------G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~ 61 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC-----------------GTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLE 61 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC-----------------CCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHC
Confidence 467788889999999999999 44888887888888883 2 67777 99999999999998
Q ss_pred CCHHHHHHHHHHHhhhhh-cCCHHHHHHHHH
Q 003024 512 MNEAEKQLRHEKHYRYVS-THDVAYWARSFF 541 (856)
Q Consensus 512 m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l 541 (856)
.+++++...++.+++|. .|++.+-++.|+
T Consensus 62 -~~~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 62 -NPEERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred -CHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 55677777777888887 688888888776
No 166
>PRK06769 hypothetical protein; Validated
Probab=97.99 E-value=3.8e-05 Score=77.28 Aligned_cols=65 Identities=12% Similarity=0.126 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------------ccccceE
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------------PSKAKYY 825 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------~s~A~y~ 825 (856)
+......+++++ +.+++++++|||+.+|+..-+.+|.. ++.|..|.. ...+.|+
T Consensus 95 ~p~~~~~~~~~l---~~~p~~~i~IGD~~~Di~aA~~aGi~-----------~i~v~~g~~~~~~~~~~~~l~~~~~~~~ 160 (173)
T PRK06769 95 STGMLLQAAEKH---GLDLTQCAVIGDRWTDIVAAAKVNAT-----------TILVRTGAGYDALHTYRDKWAHIEPNYI 160 (173)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEEecCCCchhhhhhhcccccCCCcch
Confidence 556677788888 89999999999999999999999973 466776642 1346677
Q ss_pred cCChhHHHHHH
Q 003024 826 LDDAAEVVTML 836 (856)
Q Consensus 826 l~~~~eV~~~L 836 (856)
+++..++..+|
T Consensus 161 ~~~~~el~~~l 171 (173)
T PRK06769 161 AENFEDAVNWI 171 (173)
T ss_pred hhCHHHHHHHH
Confidence 88888887764
No 167
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.98 E-value=1.3e-05 Score=85.69 Aligned_cols=65 Identities=18% Similarity=0.169 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHhhhcCCC-cceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------------------
Q 003024 758 KGVVAEKIFTTMAESGRH-ADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------------------ 818 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------------ 818 (856)
+......+++++ |+. ++++++|||+.+|+.+-+.+|.. +++|+.|..
T Consensus 158 ~p~~~~~a~~~l---~~~~~~~~l~IGDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~ 223 (253)
T TIGR01422 158 APWMALKNAIEL---GVYDVAACVKVGDTVPDIEEGRNAGMW-----------TVGLILSSNELGLSEEEYRALDPAELE 223 (253)
T ss_pred CHHHHHHHHHHc---CCCCchheEEECCcHHHHHHHHHCCCe-----------EEEEecCCcccCCCHHHHHhCCHHHHH
Confidence 567788888888 885 89999999999999999999973 467777743
Q ss_pred -----------ccccceEcCChhHHHHHH
Q 003024 819 -----------PSKAKYYLDDAAEVVTML 836 (856)
Q Consensus 819 -----------~s~A~y~l~~~~eV~~~L 836 (856)
...|++++++..++..+|
T Consensus 224 ~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 224 ARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 245788888888876554
No 168
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.95 E-value=4.8e-05 Score=79.57 Aligned_cols=62 Identities=10% Similarity=0.014 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCc-----cccceEcCChhHH
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP-----SKAKYYLDDAAEV 832 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-----s~A~y~l~~~~eV 832 (856)
+...++.+++++ |++++++++|||+.+|+++.+.+|.. ++.+.-+... ..|.+++.+..++
T Consensus 150 ~~~~~~~~~~~~---~~~~~~~~~igDs~~Di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~~~dl 215 (222)
T PRK10826 150 HPEVYLNCAAKL---GVDPLTCVALEDSFNGMIAAKAARMR-----------SIVVPAPEQQNDPRWALADVKLESLTEL 215 (222)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCChhhHHHHHHcCCE-----------EEEecCCccCchhhhhhhheeccCHHHH
Confidence 667899999999 99999999999999999999999973 2334333221 2567777777665
Q ss_pred H
Q 003024 833 V 833 (856)
Q Consensus 833 ~ 833 (856)
.
T Consensus 216 ~ 216 (222)
T PRK10826 216 T 216 (222)
T ss_pred h
Confidence 3
No 169
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.95 E-value=4.6e-05 Score=77.18 Aligned_cols=66 Identities=18% Similarity=0.153 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC-----cccc--ceEcCChh
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK-----PSKA--KYYLDDAA 830 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A--~y~l~~~~ 830 (856)
+......+++.+ |.+++++++|||+.+|+.+.+.+|.. ++.|..|.. ...+ .+++++..
T Consensus 105 ~p~~~~~~~~~l---~~~~~~~~~VgDs~~Di~~A~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ii~~l~ 170 (181)
T PRK08942 105 KPGMLLSIAERL---NIDLAGSPMVGDSLRDLQAAAAAGVT-----------PVLVRTGKGVTTLAEGAAPGTWVLDSLA 170 (181)
T ss_pred CHHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCchhhhcccCCCceeecCHH
Confidence 566777888888 99999999999999999999999963 356666642 2345 78888888
Q ss_pred HHHHHHH
Q 003024 831 EVVTMLE 837 (856)
Q Consensus 831 eV~~~L~ 837 (856)
++.++|.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 8877664
No 170
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.95 E-value=6.7e-05 Score=78.26 Aligned_cols=65 Identities=17% Similarity=0.172 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHhhhcCCC-cceEEEEeCCchhHHHHHHccccccCCCCCCCccE-EEEEeCCC------ccccceEcCCh
Q 003024 758 KGVVAEKIFTTMAESGRH-ADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASV-FACTVGQK------PSKAKYYLDDA 829 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~-~av~vG~~------~s~A~y~l~~~ 829 (856)
+...+..+++++ ++. ++++++|||+.+|+.+-+.+|.. + +.|+.|.. ...|.+++++.
T Consensus 147 ~p~~~~~a~~~~---~~~~~~~~~~igD~~~Di~aa~~aG~~-----------~~i~~~~g~~~~~~~~~~~~~~~i~~~ 212 (220)
T TIGR03351 147 APDLILRAMELT---GVQDVQSVAVAGDTPNDLEAGINAGAG-----------AVVGVLTGAHDAEELSRHPHTHVLDSV 212 (220)
T ss_pred CHHHHHHHHHHc---CCCChhHeEEeCCCHHHHHHHHHCCCC-----------eEEEEecCCCcHHHHhhcCCceeecCH
Confidence 778899999998 887 79999999999999999999974 3 45666532 24577888888
Q ss_pred hHHHHHH
Q 003024 830 AEVVTML 836 (856)
Q Consensus 830 ~eV~~~L 836 (856)
.++..++
T Consensus 213 ~~l~~~~ 219 (220)
T TIGR03351 213 ADLPALL 219 (220)
T ss_pred HHHHHhh
Confidence 8776654
No 171
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=97.91 E-value=0.00011 Score=84.47 Aligned_cols=132 Identities=8% Similarity=0.133 Sum_probs=98.3
Q ss_pred cCCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcc
Q 003024 333 FEGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYE 412 (856)
Q Consensus 333 ~~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~ 412 (856)
+.++.++++ + ...|+|++.+.++.|++. |=+ |.++ ++..++.++ .+ +.
T Consensus 281 ~~~~~l~~t-----~----s~~I~~i~~Lv~~lPd~~----f~I-ga~t--------e~s~kL~~L-~~---------y~ 328 (438)
T TIGR02919 281 YRKQALILT-----N----SDQIEHLEEIVQALPDYH----FHI-AALT--------EMSSKLMSL-DK---------YD 328 (438)
T ss_pred CcccEEEEC-----C----HHHHHHHHHHHHhCCCcE----EEE-EecC--------cccHHHHHH-Hh---------cC
Confidence 455666666 1 899999999999999976 543 5443 112344444 22 24
Q ss_pred cEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCC-cccccccCCc
Q 003024 413 PVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEF-IGCSPSLSGA 491 (856)
Q Consensus 413 pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l~~a 491 (856)
.++.+.+ +....+..+|..||+++.+|..||++++..||+..+. |+|.-+. .|..+.+.+|
T Consensus 329 nvvly~~-~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~-----------------pI~afd~t~~~~~~i~~g 390 (438)
T TIGR02919 329 NVKLYPN-ITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNL-----------------LILGFEETAHNRDFIASE 390 (438)
T ss_pred CcEEECC-cChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCC-----------------cEEEEecccCCcccccCC
Confidence 4666665 4456788999999999999999999999999999643 5555554 4555566679
Q ss_pred eeeCCCCHHHHHHHHHHHHcCCH
Q 003024 492 IRVNPWNIEATAEAMHEAIQMNE 514 (856)
Q Consensus 492 l~VnP~d~~~~A~ai~~aL~m~~ 514 (856)
.+|++.|+++++++|.++|+.+.
T Consensus 391 ~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 391 NIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred ceecCCCHHHHHHHHHHHhcCHH
Confidence 99999999999999999998663
No 172
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.90 E-value=5e-05 Score=84.99 Aligned_cols=89 Identities=10% Similarity=0.047 Sum_probs=64.8
Q ss_pred CCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeC
Q 003024 737 NEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVG 816 (856)
Q Consensus 737 ~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG 816 (856)
++...++.+.....-+| +.......++.+ |+.++++++|||+.+|+.+-+.+|.. +++|+.+
T Consensus 257 ~yFd~Iv~sddv~~~KP----~Peifl~A~~~l---gl~Peecl~IGDS~~DIeAAk~AGm~-----------~IgV~~~ 318 (381)
T PLN02575 257 GFFSVIVAAEDVYRGKP----DPEMFIYAAQLL---NFIPERCIVFGNSNQTVEAAHDARMK-----------CVAVASK 318 (381)
T ss_pred HHceEEEecCcCCCCCC----CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCC
Confidence 33445555544333344 678889999999 99999999999999999999999973 3455443
Q ss_pred CC---ccccceEcCChhHH-HHHHHHHHHhc
Q 003024 817 QK---PSKAKYYLDDAAEV-VTMLEALAEAS 843 (856)
Q Consensus 817 ~~---~s~A~y~l~~~~eV-~~~L~~L~~~~ 843 (856)
.. ...|++++++..++ ...|+.|+..-
T Consensus 319 ~~~~~l~~Ad~iI~s~~EL~~~~l~~l~~~~ 349 (381)
T PLN02575 319 HPIYELGAADLVVRRLDELSIVDLKNLADIE 349 (381)
T ss_pred CChhHhcCCCEEECCHHHHHHHHHhhhhhcC
Confidence 21 23588899999997 66777777654
No 173
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.89 E-value=0.00012 Score=78.51 Aligned_cols=80 Identities=11% Similarity=0.060 Sum_probs=57.5
Q ss_pred CCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeC
Q 003024 737 NEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVG 816 (856)
Q Consensus 737 ~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG 816 (856)
.+...++.+...-.-+| +......+++++ |++++++++|||+.+|+.+-+.+|.. +++|+ |
T Consensus 150 ~~Fd~ii~~~d~~~~KP----~Pe~~~~a~~~l---~~~p~~~l~IgDs~~Di~aA~~aG~~-----------~i~v~-g 210 (260)
T PLN03243 150 GFFSVVLAAEDVYRGKP----DPEMFMYAAERL---GFIPERCIVFGNSNSSVEAAHDGCMK-----------CVAVA-G 210 (260)
T ss_pred hhCcEEEecccCCCCCC----CHHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHcCCE-----------EEEEe-c
Confidence 33344555543333345 577888999999 99999999999999999999999973 34554 4
Q ss_pred CC----ccccceEcCChhHHHHH
Q 003024 817 QK----PSKAKYYLDDAAEVVTM 835 (856)
Q Consensus 817 ~~----~s~A~y~l~~~~eV~~~ 835 (856)
.. ...|.+++++..++...
T Consensus 211 ~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 211 KHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred CCchhhhccCCEEeCCHHHHHHH
Confidence 32 24678889998875544
No 174
>PRK11587 putative phosphatase; Provisional
Probab=97.89 E-value=3.4e-05 Score=80.50 Aligned_cols=61 Identities=10% Similarity=-0.033 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC---ccccceEcCChhHH
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK---PSKAKYYLDDAAEV 832 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~A~y~l~~~~eV 832 (856)
+.......++++ |++++++++|||+.+|+..-+.+|.. +++|+.|.. ...|.+++++..++
T Consensus 140 ~p~~~~~~~~~~---g~~p~~~l~igDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLL---GLAPQECVVVEDAPAGVLSGLAAGCH-----------VIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHc---CCCcccEEEEecchhhhHHHHHCCCE-----------EEEECCCCchhhhccCCEEecchhhe
Confidence 567788888888 99999999999999999999999863 344544432 24577777777654
No 175
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.88 E-value=3.3e-05 Score=79.76 Aligned_cols=66 Identities=12% Similarity=0.231 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC------ccccceEcCChhH
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK------PSKAKYYLDDAAE 831 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~A~y~l~~~~e 831 (856)
|...++.+++++ |++++++++|||+.+|+.+-+.+|.. +++|+.|.. ...|+|.++++.+
T Consensus 133 ~~~~~~~~~~~~---~~~~~~~l~igD~~~Di~aA~~~Gi~-----------~i~~~~g~~~~~~l~~~~~~~~~~~~~~ 198 (205)
T TIGR01454 133 APDIVREALRLL---DVPPEDAVMVGDAVTDLASARAAGTA-----------TVAALWGEGDAGELLAARPDFLLRKPQS 198 (205)
T ss_pred ChHHHHHHHHHc---CCChhheEEEcCCHHHHHHHHHcCCe-----------EEEEEecCCChhhhhhcCCCeeeCCHHH
Confidence 678889999998 99999999999999999999999973 467888852 3568899999999
Q ss_pred HHHHHH
Q 003024 832 VVTMLE 837 (856)
Q Consensus 832 V~~~L~ 837 (856)
+..+++
T Consensus 199 l~~~~~ 204 (205)
T TIGR01454 199 LLALCR 204 (205)
T ss_pred HHHHhh
Confidence 887654
No 176
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.86 E-value=3e-05 Score=84.53 Aligned_cols=61 Identities=13% Similarity=0.073 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCc----cccceEcCChhHH
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKP----SKAKYYLDDAAEV 832 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~A~y~l~~~~eV 832 (856)
+...+..+++++ |++++++++|||+.+|+.+-+.+|.. +++|..|... ..|++++++..++
T Consensus 204 ~p~~~~~a~~~~---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~ad~vi~~~~~l 268 (286)
T PLN02779 204 DPDIYNLAAETL---GVDPSRCVVVEDSVIGLQAAKAAGMR-----------CIVTKSSYTADEDFSGADAVFDCLGDV 268 (286)
T ss_pred CHHHHHHHHHHh---CcChHHEEEEeCCHHhHHHHHHcCCE-----------EEEEccCCccccccCCCcEEECChhhc
Confidence 566889999999 99999999999999999999999973 4566666421 3588888887664
No 177
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.84 E-value=0.00026 Score=73.94 Aligned_cols=66 Identities=24% Similarity=0.282 Sum_probs=47.4
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC------CccccceEcCC
Q 003024 755 GVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ------KPSKAKYYLDD 828 (856)
Q Consensus 755 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~------~~s~A~y~l~~ 828 (856)
+..|..+++. + +..++++++|||+.||++|.+.+|.. ++ -+. ....+.+..++
T Consensus 146 ~~~K~~~l~~----~---~~~~~~~i~iGDs~~Di~aa~~Ag~~------------~a--~~~l~~~~~~~~~~~~~~~~ 204 (219)
T PRK09552 146 GCCKPSLIRK----L---SDTNDFHIVIGDSITDLEAAKQADKV------------FA--RDFLITKCEELGIPYTPFET 204 (219)
T ss_pred CCchHHHHHH----h---ccCCCCEEEEeCCHHHHHHHHHCCcc------------ee--HHHHHHHHHHcCCCccccCC
Confidence 3457776654 3 66778999999999999999999863 22 221 13345556789
Q ss_pred hhHHHHHHHHHHH
Q 003024 829 AAEVVTMLEALAE 841 (856)
Q Consensus 829 ~~eV~~~L~~L~~ 841 (856)
..+|.+.|+.+..
T Consensus 205 f~ei~~~l~~~~~ 217 (219)
T PRK09552 205 FHDVQTELKHLLE 217 (219)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988754
No 178
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.81 E-value=3.9e-05 Score=81.90 Aligned_cols=56 Identities=14% Similarity=0.210 Sum_probs=48.5
Q ss_pred CcEEEEEecCCCCCCCCCCCCCC---CHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC
Q 003024 590 KSRAILFDYDGTVMPQTSINKAP---SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~---s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~ 649 (856)
..++|+|||||||++ ..+.+ ++.+.++|++| ++.|+.++|+|++++..+...+..+
T Consensus 125 ~~kvIvFDLDgTLi~---~~~~v~irdPgV~EaL~~L-kekGikLaIaTS~~Re~v~~~L~~l 183 (301)
T TIGR01684 125 PPHVVVFDLDSTLIT---DEEPVRIRDPRIYDSLTEL-KKRGCILVLWSYGDRDHVVESMRKV 183 (301)
T ss_pred cceEEEEecCCCCcC---CCCccccCCHHHHHHHHHH-HHCCCEEEEEECCCHHHHHHHHHHc
Confidence 468999999999999 55554 69999999998 8889999999999999888877543
No 179
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.78 E-value=5.4e-05 Score=78.90 Aligned_cols=38 Identities=13% Similarity=0.161 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHcccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~ 798 (856)
+....+.+++++ |++++++++|||+. +|+.+-+.+|..
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 152 HPKIFYAALKRL---GVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCChHHHHHHHHHCCCE
Confidence 567889999999 99999999999997 999999999973
No 180
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.69 E-value=0.00017 Score=68.71 Aligned_cols=54 Identities=15% Similarity=0.216 Sum_probs=41.4
Q ss_pred EEEEEecCCCCCCCCC--CCC-------CCCHHHHHHHHHHHhhCCCeEEEecCC-ChhhHHHhh
Q 003024 592 RAILFDYDGTVMPQTS--INK-------APSQAVISIINTLCNDARNTVFVVSGR-GRDCLGKWF 646 (856)
Q Consensus 592 rlI~~DlDGTLl~~~~--~~~-------~~s~~~~~aL~~L~~d~g~~V~I~TGR-~~~~l~~~~ 646 (856)
|+|++|+||||++... ... .+-+.+.+.|+.| ++.|+.++|+|++ ........+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L-k~~g~~l~i~Sn~~~~~~~~~~l 64 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTL-KKNGFLLALASYNDDPHVAYELL 64 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHH-HHCCeEEEEEeCCCCHHHHHHHH
Confidence 6899999999998421 111 2467999999997 7789999999999 666555555
No 181
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.55 E-value=0.00024 Score=71.60 Aligned_cols=63 Identities=13% Similarity=0.061 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC-----ccccceEcCChhHH
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK-----PSKAKYYLDDAAEV 832 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A~y~l~~~~eV 832 (856)
+...+..+++++ |++++++++|||+.+|+..-+.+|.. .+..|..|.. ...|++++++..++
T Consensus 108 ~p~~~~~a~~~~---~~~~~~~v~VGDs~~Di~aA~~aG~~----------~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 108 KPGMLLQARKEL---HIDMAQSYMVGDKLEDMQAGVAAKVK----------TNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CHHHHHHHHHHc---CcChhhEEEEcCCHHHHHHHHHCCCc----------EEEEEecCCcccccccccCCEEeccHHHh
Confidence 566778888888 99999999999999999999999973 1145666753 13488888888776
Q ss_pred H
Q 003024 833 V 833 (856)
Q Consensus 833 ~ 833 (856)
.
T Consensus 175 ~ 175 (176)
T TIGR00213 175 P 175 (176)
T ss_pred h
Confidence 4
No 182
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.52 E-value=0.00027 Score=82.29 Aligned_cols=66 Identities=20% Similarity=0.263 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCChhHHH
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDDAAEVV 833 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~~~eV~ 833 (856)
|...+..+++++ +++++++|||+.+|+.+.+.+|.. ++.|..|.. ...+.|++++..++.
T Consensus 387 kP~~~~~al~~l-----~~~~~v~VGDs~~Di~aAk~AG~~-----------~I~v~~~~~~~~~~~~~d~~i~~l~el~ 450 (459)
T PRK06698 387 KSDLVKSILNKY-----DIKEAAVVGDRLSDINAAKDNGLI-----------AIGCNFDFAQEDELAQADIVIDDLLELK 450 (459)
T ss_pred CcHHHHHHHHhc-----CcceEEEEeCCHHHHHHHHHCCCe-----------EEEEeCCCCcccccCCCCEEeCCHHHHH
Confidence 666777777765 468999999999999999999973 355655532 245889999999988
Q ss_pred HHHHHH
Q 003024 834 TMLEAL 839 (856)
Q Consensus 834 ~~L~~L 839 (856)
++|...
T Consensus 451 ~~l~~~ 456 (459)
T PRK06698 451 GILSTV 456 (459)
T ss_pred HHHHHH
Confidence 877553
No 183
>PRK09449 dUMP phosphatase; Provisional
Probab=97.48 E-value=0.0001 Score=77.14 Aligned_cols=66 Identities=18% Similarity=0.115 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhhhcCCC-cceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCC-C---ccccceEcCChhH
Q 003024 758 KGVVAEKIFTTMAESGRH-ADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQ-K---PSKAKYYLDDAAE 831 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~-~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~---~s~A~y~l~~~~e 831 (856)
+....+.+++++ |.. ++++++|||+. +|+..-+.+|.. ++.+..+. . ...+.|.+++..+
T Consensus 152 ~p~~~~~~~~~~---~~~~~~~~~~vgD~~~~Di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~i~~~~e 217 (224)
T PRK09449 152 DVAIFDYALEQM---GNPDRSRVLMVGDNLHSDILGGINAGID-----------TCWLNAHGREQPEGIAPTYQVSSLSE 217 (224)
T ss_pred CHHHHHHHHHHc---CCCCcccEEEEcCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCeEEECCHHH
Confidence 567788899988 864 58999999997 799999999973 12333222 1 1247788899998
Q ss_pred HHHHHH
Q 003024 832 VVTMLE 837 (856)
Q Consensus 832 V~~~L~ 837 (856)
+.++|.
T Consensus 218 l~~~l~ 223 (224)
T PRK09449 218 LEQLLC 223 (224)
T ss_pred HHHHHh
Confidence 888764
No 184
>PLN02940 riboflavin kinase
Probab=97.48 E-value=0.00054 Score=77.71 Aligned_cols=61 Identities=15% Similarity=0.030 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEcCChhHH
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYLDDAAEV 832 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l~~~~eV 832 (856)
+......+++.+ |++++++++|||+.+|+..-+.+|.. ++.|+.|.. ...|.+.+++..++
T Consensus 152 ~p~~~~~a~~~l---gv~p~~~l~VGDs~~Di~aA~~aGi~-----------~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 152 SPDIFLEAAKRL---NVEPSNCLVIEDSLPGVMAGKAAGME-----------VIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred CHHHHHHHHHHc---CCChhHEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCcchhhccCccEEeCCHhHc
Confidence 678899999999 99999999999999999999999973 355555532 24567777777664
No 185
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.47 E-value=0.0005 Score=72.15 Aligned_cols=69 Identities=14% Similarity=0.092 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--ccccceEcCChhHHHHH
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--PSKAKYYLDDAAEVVTM 835 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~s~A~y~l~~~~eV~~~ 835 (856)
+....+.+++++ |++++++++|||+.+|+..-+.+|.. .+++|+.+.. ...+...+.+.+++.++
T Consensus 151 ~p~~~~~~~~~~---~~~p~~~l~igDs~~di~aA~~aG~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 217 (224)
T PRK14988 151 DQRLWQAVAEHT---GLKAERTLFIDDSEPILDAAAQFGIR----------YCLGVTNPDSGIAEKQYQRHPSLNDYRRL 217 (224)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCCe----------EEEEEeCCCCCccchhccCCCcHHHHHHH
Confidence 577889999999 99999999999999999999999873 1244555543 23444555677777777
Q ss_pred HHHH
Q 003024 836 LEAL 839 (856)
Q Consensus 836 L~~L 839 (856)
|+.|
T Consensus 218 ~~~l 221 (224)
T PRK14988 218 IPSL 221 (224)
T ss_pred hhhh
Confidence 7765
No 186
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.47 E-value=0.00048 Score=67.29 Aligned_cols=38 Identities=24% Similarity=0.209 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
|...++.+++.+ +++++++++|||+..|+.+-+.+|..
T Consensus 103 ~~~~~~~~~~~~---~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 103 KPGLILEALKRL---GVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 677788888988 99999999999999999999999873
No 187
>PHA02597 30.2 hypothetical protein; Provisional
Probab=97.45 E-value=0.00051 Score=70.34 Aligned_cols=60 Identities=15% Similarity=0.066 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHc--cccccCCCCCCCccEEEEEeCCCc--cccceEcCChhHHH
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEII--GNATSSGVLSSNASVFACTVGQKP--SKAKYYLDDAAEVV 833 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a--g~~~~~~~~~~~~~~~av~vG~~~--s~A~y~l~~~~eV~ 833 (856)
|...+..+++++ | ++.+++|||+.+|+..-+.+ |.. ++.|..|+.+ -.+.|.+++..++.
T Consensus 132 kp~~~~~a~~~~---~--~~~~v~vgDs~~di~aA~~a~~Gi~-----------~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 132 KEKLFIKAKEKY---G--DRVVCFVDDLAHNLDAAHEALSQLP-----------VIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cHHHHHHHHHHh---C--CCcEEEeCCCHHHHHHHHHHHcCCc-----------EEEecchhhccccchhhhhccHHHHh
Confidence 678889999988 7 78899999999999999998 873 4677777642 25557777766654
No 188
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.40 E-value=0.00031 Score=75.22 Aligned_cols=56 Identities=16% Similarity=0.213 Sum_probs=48.3
Q ss_pred CcEEEEEecCCCCCCCCCCCCCC---CHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC
Q 003024 590 KSRAILFDYDGTVMPQTSINKAP---SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~---s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~ 649 (856)
..++|+||+||||++ ..+.+ ++.+.++|++| ++.|+.++|+|+.+...+...+..+
T Consensus 127 ~~~~i~~D~D~TL~~---~~~~v~irdp~V~EtL~eL-kekGikLaIvTNg~Re~v~~~Le~l 185 (303)
T PHA03398 127 IPHVIVFDLDSTLIT---DEEPVRIRDPFVYDSLDEL-KERGCVLVLWSYGNREHVVHSLKET 185 (303)
T ss_pred eccEEEEecCCCccC---CCCccccCChhHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHHc
Confidence 368999999999999 66666 79999999998 8889999999988888887777543
No 189
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.33 E-value=0.0012 Score=65.52 Aligned_cols=38 Identities=21% Similarity=0.146 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
|...++.+++++ +++++++++|||+.+|+++.+.+|..
T Consensus 105 ~~~~~~~~~~~~---~~~~~e~l~IGD~~~Di~~A~~aGi~ 142 (161)
T TIGR01261 105 KIKLLEPYLKKN---LIDKARSYVIGDRETDMQLAENLGIR 142 (161)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCCe
Confidence 778888888888 99999999999999999999999973
No 190
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.31 E-value=0.0028 Score=69.42 Aligned_cols=55 Identities=27% Similarity=0.486 Sum_probs=45.7
Q ss_pred cEEEEEecCCCCCCCCCC---------CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhh
Q 003024 591 SRAILFDYDGTVMPQTSI---------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWF 646 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~---------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~ 646 (856)
.+++++|+||||...... +..+.+.+.++|++| ++.|..++++|||+.......+
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~i~T~r~~~~~~~~l 221 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMY-KAAGYEIIVVSGRDGVCEEDTV 221 (300)
T ss_pred CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHH-HhCCCEEEEEeCCChhhHHHHH
Confidence 579999999999973311 346789999999998 7789999999999998877666
No 191
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.26 E-value=0.0021 Score=64.47 Aligned_cols=48 Identities=19% Similarity=0.286 Sum_probs=40.3
Q ss_pred cCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCC
Q 003024 588 RSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRG 638 (856)
Q Consensus 588 ~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~ 638 (856)
+...+++++|+||||+.. ....+.+.+.++|++| ++.|..++|+|+.+
T Consensus 22 ~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~L-k~~g~~l~I~Sn~~ 69 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEEL-KAAGRKLLIVSNNA 69 (170)
T ss_pred HCCCCEEEEecCCccccC--CCCCcChhHHHHHHHH-HHcCCEEEEEeCCc
Confidence 357899999999999973 1236778999999997 78899999999987
No 192
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=97.18 E-value=0.0019 Score=65.16 Aligned_cols=37 Identities=11% Similarity=0.091 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
+....+.+++++ +++++++++|||+.+|+.+-+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~v~vgD~~~di~aA~~aG~ 179 (185)
T TIGR01990 143 DPEIFLAAAEGL---GVSPSECIGIEDAQAGIEAIKAAGM 179 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEecCHHHHHHHHHcCC
Confidence 678888999998 9999999999999999999999997
No 193
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.13 E-value=0.003 Score=63.07 Aligned_cols=48 Identities=19% Similarity=0.321 Sum_probs=36.1
Q ss_pred CcEEEEEecCCCCCCCCCCCCC---------CCHHHHHHHHHHHhhCCCeEEEecCCC
Q 003024 590 KSRAILFDYDGTVMPQTSINKA---------PSQAVISIINTLCNDARNTVFVVSGRG 638 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~---------~s~~~~~aL~~L~~d~g~~V~I~TGR~ 638 (856)
+.|++++|+||||+...+.... +-+.+.++|++| ++.|+.++|+|..+
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-k~~G~~l~I~TN~~ 68 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQEL-DDEGYKIVIFTNQS 68 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHH-HHCCCEEEEEeCCc
Confidence 3789999999999973211101 236788999998 78899999999854
No 194
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=97.13 E-value=0.0098 Score=61.87 Aligned_cols=64 Identities=17% Similarity=0.159 Sum_probs=44.4
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC------CccccceEcCCh
Q 003024 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ------KPSKAKYYLDDA 829 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~------~~s~A~y~l~~~ 829 (856)
..|..+++.+. ..++.+++|||+.||++|++.++.. ++-+. ....+....++-
T Consensus 143 ~~K~~~l~~~~-------~~~~~~i~iGDg~~D~~~a~~Ad~~--------------~ar~~l~~~~~~~~~~~~~~~~f 201 (214)
T TIGR03333 143 CCKPSLIRKLS-------EPNDYHIVIGDSVTDVEAAKQSDLC--------------FARDYLLNECEELGLNHAPFQDF 201 (214)
T ss_pred CCHHHHHHHHh-------hcCCcEEEEeCCHHHHHHHHhCCee--------------EehHHHHHHHHHcCCCccCcCCH
Confidence 45888877653 3467899999999999999999853 22221 123333345788
Q ss_pred hHHHHHHHHHH
Q 003024 830 AEVVTMLEALA 840 (856)
Q Consensus 830 ~eV~~~L~~L~ 840 (856)
.+|.+.|++..
T Consensus 202 ~di~~~l~~~~ 212 (214)
T TIGR03333 202 YDVRKELENVK 212 (214)
T ss_pred HHHHHHHHHHh
Confidence 99999887654
No 195
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=97.13 E-value=0.014 Score=62.58 Aligned_cols=47 Identities=19% Similarity=0.339 Sum_probs=39.5
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhh
Q 003024 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDC 641 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~ 641 (856)
+.+.++||+||||.. ..++-+...++|++| +++|.+++++|-.+..+
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L-~~~g~~~iflTNn~~~s 53 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRL-KAAGKPVIFLTNNSTRS 53 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHH-HHcCCeEEEEeCCCCCC
Confidence 357899999999997 566778999999998 88899999998766543
No 196
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.12 E-value=0.002 Score=65.00 Aligned_cols=40 Identities=25% Similarity=0.301 Sum_probs=32.9
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003024 752 KPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
.+.|..|+..++.+.++. ++.+++|||+.||+++.+.++.
T Consensus 144 ~~~g~~K~~~~~~~~~~~------~~~~i~iGD~~~D~~aa~~~d~ 183 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPK------YQHIIYIGDGVTDVCPAKLSDV 183 (188)
T ss_pred CCCCCCHHHHHHHHHhhc------CceEEEECCCcchhchHhcCCc
Confidence 356678988888887642 6889999999999999999865
No 197
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.07 E-value=0.0019 Score=77.16 Aligned_cols=64 Identities=11% Similarity=0.148 Sum_probs=51.1
Q ss_pred HHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCC-CeEEEecCCChhhHHHhhcC
Q 003024 584 SAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDAR-NTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 584 ~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g-~~V~I~TGR~~~~l~~~~~~ 648 (856)
..+.....+.+++..||+++..-.....+-+.+.++|++| ++.| ++++++||.+...+....+.
T Consensus 357 ~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L-~~~g~i~v~ivTgd~~~~a~~i~~~ 421 (556)
T TIGR01525 357 NEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAAL-KRAGGIKLVMLTGDNRSAAEAVAAE 421 (556)
T ss_pred HHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHH-HHcCCCeEEEEeCCCHHHHHHHHHH
Confidence 3445566788999999988862223566889999999997 7789 99999999999998888843
No 198
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.01 E-value=0.0033 Score=78.75 Aligned_cols=64 Identities=13% Similarity=0.220 Sum_probs=48.4
Q ss_pred HHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhc
Q 003024 583 VSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (856)
Q Consensus 583 ~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 647 (856)
...+.....+.+++-.||+++..-.....+-+...++|++| ++.|++++++||.+....+....
T Consensus 622 ~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L-~~~gi~v~~~Tgd~~~~a~~ia~ 685 (834)
T PRK10671 622 ITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRL-HKAGYRLVMLTGDNPTTANAIAK 685 (834)
T ss_pred HHHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHH
Confidence 34455566788888889987631113445667888999997 88899999999999998888774
No 199
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=97.01 E-value=0.0009 Score=67.80 Aligned_cols=37 Identities=11% Similarity=-0.019 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
+...++.+++++ |.+++++++|||+.+|+..-+.+|.
T Consensus 144 ~p~~~~~~~~~~---~~~~~~~l~igDs~~di~aA~~aG~ 180 (188)
T PRK10725 144 APDTFLRCAQLM---GVQPTQCVVFEDADFGIQAARAAGM 180 (188)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeccHhhHHHHHHCCC
Confidence 677899999999 9999999999999999999999997
No 200
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=96.93 E-value=0.0017 Score=63.59 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIG 796 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 796 (856)
+...+..+++++ |+++ ++++|||+.+|+.+-+.+|
T Consensus 120 ~~~~~~~~~~~~---~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 120 EPEIFLAALESL---GLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHHc---CCCC-CEEEEeCCHHHHHHHHHcc
Confidence 678899999999 9988 9999999999999988765
No 201
>PRK11590 hypothetical protein; Provisional
Probab=96.92 E-value=0.0026 Score=66.09 Aligned_cols=26 Identities=12% Similarity=0.193 Sum_probs=22.5
Q ss_pred CCCcceEEEEeCCchhHHHHHHcccc
Q 003024 773 GRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 773 gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
+.+.+...+.|||.||.+||+.+++.
T Consensus 173 ~~~~~~~~aY~Ds~~D~pmL~~a~~~ 198 (211)
T PRK11590 173 GTPLRLYSGYSDSKQDNPLLYFCQHR 198 (211)
T ss_pred CCCcceEEEecCCcccHHHHHhCCCC
Confidence 45667789999999999999999973
No 202
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.90 E-value=0.0013 Score=66.38 Aligned_cols=37 Identities=8% Similarity=-0.035 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
+....+.+++++ +++++++++|||+.+|+.+-+.+|.
T Consensus 144 ~~~~~~~~~~~~---~~~~~~~v~IgD~~~di~aA~~~G~ 180 (185)
T TIGR02009 144 HPETFLLAAELL---GVSPNECVVFEDALAGVQAARAAGM 180 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCC
Confidence 456778888988 9999999999999999999999986
No 203
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=96.86 E-value=0.0078 Score=66.75 Aligned_cols=114 Identities=18% Similarity=0.157 Sum_probs=81.1
Q ss_pred CcEEEEEecCCCCCCCCCCC--------CCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEE
Q 003024 590 KSRAILFDYDGTVMPQTSIN--------KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYF 661 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~--------~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (856)
.+|+|++|+|+||....-.+ ..+-+.+.+.|++| +++|+.++|||..+...+...+..-+.+ +
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L-~~~Gi~lai~S~n~~~~a~~~l~~~~~~--------~ 72 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTL-KKQGFLLALASKNDEDDAKKVFERRKDF--------I 72 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHH-HhCCCEEEEEcCCCHHHHHHHHHhCccc--------c
Confidence 47999999999999732001 12347899999998 7889999999999998888777321110 0
Q ss_pred EEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeE
Q 003024 662 MRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAA 741 (856)
Q Consensus 662 I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~ 741 (856)
.. + ++| ..
T Consensus 73 -------------~~----~--------~~f-----------------------------------------------~~ 80 (320)
T TIGR01686 73 -------------LQ----A--------EDF-----------------------------------------------DA 80 (320)
T ss_pred -------------Cc----H--------HHe-----------------------------------------------eE
Confidence 00 0 000 00
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcc
Q 003024 742 VKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIG 796 (856)
Q Consensus 742 v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 796 (856)
+..+ ..| |...++.+++.+ |++++.+++|||+..|..+.+.+.
T Consensus 81 ~~~~-----~~p----k~~~i~~~~~~l---~i~~~~~vfidD~~~d~~~~~~~l 123 (320)
T TIGR01686 81 RSIN-----WGP----KSESLRKIAKKL---NLGTDSFLFIDDNPAERANVKITL 123 (320)
T ss_pred EEEe-----cCc----hHHHHHHHHHHh---CCCcCcEEEECCCHHHHHHHHHHC
Confidence 0011 123 999999999999 999999999999999999998865
No 204
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=96.86 E-value=0.02 Score=60.51 Aligned_cols=50 Identities=22% Similarity=0.323 Sum_probs=41.3
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEec---CCChhhHHHhhcC
Q 003024 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVS---GRGRDCLGKWFSP 648 (856)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~T---GR~~~~l~~~~~~ 648 (856)
++||+||||++ .... -+.+.++|+.| +..|.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~---~~~~-~~~a~e~i~~l-~~~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWL---GHKP-IPGAAEALNRL-RAKGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCc---CCcc-CcCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 58999999998 4444 45889999997 78899999998 8999988777744
No 205
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.85 E-value=0.0018 Score=68.39 Aligned_cols=64 Identities=23% Similarity=0.313 Sum_probs=47.7
Q ss_pred cccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCC---CCCC-CCH---------------------------HHHHHHHH
Q 003024 574 FRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTS---INKA-PSQ---------------------------AVISIINT 622 (856)
Q Consensus 574 f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~---~~~~-~s~---------------------------~~~~aL~~ 622 (856)
..-.++++|.+..+..+.-.|+||+||||++..+ .... +++ ...+.|+.
T Consensus 46 ~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~ 125 (237)
T TIGR01672 46 IHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eeEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHH
Confidence 4457889999998877777999999999998433 1001 122 26778888
Q ss_pred HHhhCCCeEEEecCCC
Q 003024 623 LCNDARNTVFVVSGRG 638 (856)
Q Consensus 623 L~~d~g~~V~I~TGR~ 638 (856)
| +++|.+++|+|+|.
T Consensus 126 l-~~~G~~i~iVTnr~ 140 (237)
T TIGR01672 126 H-QRRGDAIFFVTGRT 140 (237)
T ss_pred H-HHCCCEEEEEeCCC
Confidence 6 78899999999993
No 206
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=96.84 E-value=0.00076 Score=70.39 Aligned_cols=38 Identities=8% Similarity=0.028 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
+......+++++ |++++++++|||+.+|+..-+.+|..
T Consensus 144 ~p~~~~~a~~~~---~~~p~~~l~igDs~~di~aA~~aG~~ 181 (221)
T PRK10563 144 DPALMFHAAEAM---NVNVENCILVDDSSAGAQSGIAAGME 181 (221)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCCE
Confidence 678899999999 99999999999999999999999963
No 207
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=96.84 E-value=0.0036 Score=74.40 Aligned_cols=59 Identities=15% Similarity=0.194 Sum_probs=46.0
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCC-eEEEecCCChhhHHHhhcC
Q 003024 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARN-TVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~-~V~I~TGR~~~~l~~~~~~ 648 (856)
...+.++.-.||+++..-.....+-+.+.++|++| ++.|+ +++++||.+........+.
T Consensus 340 ~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L-~~~Gi~~v~vvTgd~~~~a~~i~~~ 399 (536)
T TIGR01512 340 AGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAEL-KALGIEKVVMLTGDRRAVAERVARE 399 (536)
T ss_pred CCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHH-HHcCCCcEEEEcCCCHHHHHHHHHH
Confidence 34566777778887752223456779999999998 88899 9999999999999888843
No 208
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.83 E-value=0.026 Score=59.95 Aligned_cols=47 Identities=17% Similarity=0.290 Sum_probs=39.4
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhh
Q 003024 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDC 641 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~ 641 (856)
++++++||+||||.. ...+-+.+.++|++| ++.|.+++|+|..++..
T Consensus 7 ~~~~~~~D~dG~l~~----~~~~~pga~e~L~~L-~~~G~~~~ivTN~~~~~ 53 (242)
T TIGR01459 7 DYDVFLLDLWGVIID----GNHTYPGAVQNLNKI-IAQGKPVYFVSNSPRNI 53 (242)
T ss_pred cCCEEEEeccccccc----CCccCccHHHHHHHH-HHCCCEEEEEeCCCCCh
Confidence 468999999999997 345679999999998 77899999998876654
No 209
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=96.81 E-value=0.029 Score=59.02 Aligned_cols=46 Identities=28% Similarity=0.354 Sum_probs=37.8
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003024 752 KPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
-|.+.-||..++.+++...+.|.+.+.|+++||+.||......++.
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~ 190 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRP 190 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCC
Confidence 3566789999999998754557889999999999999987776653
No 210
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.80 E-value=0.0061 Score=73.49 Aligned_cols=67 Identities=9% Similarity=0.083 Sum_probs=51.8
Q ss_pred HHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003024 581 AIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 581 ~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
...+.+.+...+.+++-+|++++..-.....+-+++.+++++| ++.|++++++||........+...
T Consensus 416 ~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l-~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQL-RKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHH
Confidence 3344555566788888888887752223556779999999996 889999999999999999998844
No 211
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.80 E-value=0.002 Score=67.01 Aligned_cols=66 Identities=18% Similarity=0.142 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCCCc----cccceEcCChhHH
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQKP----SKAKYYLDDAAEV 832 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~A~y~l~~~~eV 832 (856)
+....+.+++++. |++++++++|||+. +|+..-+.+|.. .+.+..|..+ ..+.|.+++..++
T Consensus 154 ~~~~~~~~~~~~~--~~~~~~~v~igD~~~~di~~A~~~G~~-----------~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 154 DKEIFNYALERMP--KFSKEEVLMIGDSLTADIKGGQNAGLD-----------TCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred CHHHHHHHHHHhc--CCCchheEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCceEECCHHHH
Confidence 5566777777642 67899999999998 899999999974 2445544322 3466778888877
Q ss_pred HHHH
Q 003024 833 VTML 836 (856)
Q Consensus 833 ~~~L 836 (856)
..+|
T Consensus 221 ~~~~ 224 (224)
T TIGR02254 221 YEIL 224 (224)
T ss_pred HhhC
Confidence 6553
No 212
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.80 E-value=0.0014 Score=62.59 Aligned_cols=54 Identities=17% Similarity=0.325 Sum_probs=42.1
Q ss_pred EEEEEecCCCCCCCCC-----CCCCCCHHHHHHHHHHHhhCCCeEEEecCCC--------hhhHHHhh
Q 003024 592 RAILFDYDGTVMPQTS-----INKAPSQAVISIINTLCNDARNTVFVVSGRG--------RDCLGKWF 646 (856)
Q Consensus 592 rlI~~DlDGTLl~~~~-----~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~--------~~~l~~~~ 646 (856)
|+++||+||||++... ....+.+.+.++|+.| ++.|+.++|+|+++ ...+...+
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L-~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l 67 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAEL-KEAGYKVVIVTNQSGIGRGKFSSGRVARRL 67 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHH-HHCCCEEEEEECCccccccHHHHHHHHHHH
Confidence 6899999999996110 1245678899999997 78899999999998 55555555
No 213
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=96.77 E-value=0.047 Score=60.01 Aligned_cols=204 Identities=22% Similarity=0.267 Sum_probs=116.6
Q ss_pred Ccccc----cCCHHHHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhh
Q 003024 571 DPNFR----KLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWF 646 (856)
Q Consensus 571 ~~~f~----~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~ 646 (856)
.|+|. -|++.+|...-+...-+|+-||=|+||.+.+ ..-.++..++.-|-+| -..|+.|.|+|.=++....++.
T Consensus 123 ~PSFNDvR~ILN~AQi~al~~~~~L~LvTFDgDvTLY~DG-~sl~~d~pvi~~ii~L-L~~gv~VgIVTAAGY~~a~kY~ 200 (408)
T PF06437_consen 123 PPSFNDVRHILNTAQIMALAKNYGLKLVTFDGDVTLYEDG-ASLEPDNPVIPRIIKL-LRRGVKVGIVTAAGYPGAEKYE 200 (408)
T ss_pred CCCHHHHHHHHHHHHHHHhcccCCceEEEEcCCcccccCC-CCCCCCchHHHHHHHH-HhcCCeEEEEeCCCCCChHHHH
Confidence 46664 2455555554445578999999999999833 2223456666666666 4569999999998887655554
Q ss_pred cCC------------------CCccE-EeeCCEEEEeCCC----------cceEecCCCCcccHH--------HHHHHHH
Q 003024 647 SPC------------------KKLGI-AAEHGYFMRWSAD----------EEWQNCGQSVDFGWI--------QIAEPVM 689 (856)
Q Consensus 647 ~~~------------------~~lgl-iaenG~~I~~~~~----------~~w~~~~~~~~~~w~--------~~v~~i~ 689 (856)
..+ .++.+ .+|.-|..+.... ..|.. +.-..|. +.++..+
T Consensus 201 ~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~---~~m~~W~~~dI~~lLD~AE~~L 277 (408)
T PF06437_consen 201 ERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLL---PEMKTWSEEDITELLDIAEAAL 277 (408)
T ss_pred HHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccC---ccccCcCHHHHHHHHHHHHHHH
Confidence 322 12222 2344455555432 23421 1112342 2333334
Q ss_pred HHHhhc--CCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcC------CCeEEEEcC--eEEEEEeCCCCHH
Q 003024 690 KLYTES--TDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLAN------EPAAVKSGQ--FIVEVKPQGVSKG 759 (856)
Q Consensus 690 ~~~~~~--~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~------~~~~v~~g~--~~vEI~p~gvsKG 759 (856)
....++ .| ..+-.|+-++..... ....+...+.+|+.-.++..+.. .++....|. -+++|-. |.
T Consensus 278 ~~~~~~l~Lp-a~IiRK~RAVGivP~-~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDIGd----Ks 351 (408)
T PF06437_consen 278 RDCVKRLNLP-ATIIRKERAVGIVPK-PGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDIGD----KS 351 (408)
T ss_pred HHHHHHcCCC-eeEEeecceeeEecC-CCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEcCC----cH
Confidence 444433 34 344455555444332 11223334556655444444432 356666654 4778765 99
Q ss_pred HHHHHHHHHh-hhcCCCcceEEEEeCC
Q 003024 760 VVAEKIFTTM-AESGRHADFVLCIGDD 785 (856)
Q Consensus 760 ~al~~Ll~~l-~~~gi~~d~vlaiGD~ 785 (856)
.|++.+.+.+ ...+|.+.+++-+||-
T Consensus 352 ~GV~~lQ~y~~~~~~i~~~~tLHVGDQ 378 (408)
T PF06437_consen 352 LGVRALQKYFDPEGGIKPSETLHVGDQ 378 (408)
T ss_pred HhHHHHHHHHHhccCCCccceeeehhh
Confidence 9999888776 1237999999999994
No 214
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=96.72 E-value=0.0093 Score=76.13 Aligned_cols=75 Identities=15% Similarity=0.118 Sum_probs=55.6
Q ss_pred eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC-
Q 003024 740 AAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK- 818 (856)
Q Consensus 740 ~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~- 818 (856)
..++.+...-.-+| +......+++++ +++++++++|||+.+|+..-+.+|.. ++.|..|..
T Consensus 206 d~iv~~~~~~~~KP----~Pe~~~~a~~~l---gv~p~e~v~IgDs~~Di~AA~~aGm~-----------~I~v~~~~~~ 267 (1057)
T PLN02919 206 DAIVSADAFENLKP----APDIFLAAAKIL---GVPTSECVVIEDALAGVQAARAAGMR-----------CIAVTTTLSE 267 (1057)
T ss_pred CEEEECcccccCCC----CHHHHHHHHHHc---CcCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCCCH
Confidence 34444444333445 678888999999 99999999999999999999999973 355555532
Q ss_pred ----ccccceEcCChhHH
Q 003024 819 ----PSKAKYYLDDAAEV 832 (856)
Q Consensus 819 ----~s~A~y~l~~~~eV 832 (856)
...|.+++++..++
T Consensus 268 ~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 268 EILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred HHHhhCCCCEEECChHHC
Confidence 35677888888875
No 215
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=96.55 E-value=0.0099 Score=71.07 Aligned_cols=60 Identities=12% Similarity=0.160 Sum_probs=48.2
Q ss_pred cCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003024 588 RSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 588 ~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
+...+.+.++.||+++..-.....+-+.+.++|++| ++.|+.++++||.....++.....
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~L-k~~Gi~v~ilSgd~~~~a~~ia~~ 441 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQAL-KRRGIEPVMLTGDNRKTAKAVAKE 441 (562)
T ss_pred hCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHH
Confidence 344688999999998752213556789999999997 788999999999999988888743
No 216
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.48 E-value=0.011 Score=60.75 Aligned_cols=37 Identities=19% Similarity=0.186 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~ 797 (856)
+....+.+++++ |++++++++|||+. +|+..-+.+|.
T Consensus 162 ~~~~~~~~~~~~---~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 162 DPKIFQEALERA---GISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred CHHHHHHHHHHc---CCChhHEEEECCCchHHHHHHHHcCC
Confidence 456788899998 99999999999997 99999999986
No 217
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.42 E-value=0.021 Score=71.88 Aligned_cols=164 Identities=20% Similarity=0.326 Sum_probs=100.3
Q ss_pred HHHHcCCcEEEEEecCC-----CCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeC
Q 003024 584 SAYLRSKSRAILFDYDG-----TVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEH 658 (856)
Q Consensus 584 ~~y~~s~~rlI~~DlDG-----TLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaen 658 (856)
..|.+...|.+++=+++ |++..-....++-+.+.++|++| ++.|++++++||........... .+|+...+
T Consensus 496 ~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l-~~~Gi~v~miTGD~~~tA~~ia~---~~Gi~~~~ 571 (884)
T TIGR01522 496 AEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTL-ITGGVRIIMITGDSQETAVSIAR---RLGMPSKT 571 (884)
T ss_pred HHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCCCCC
Confidence 34555567888877765 44431114556789999999996 89999999999999999999984 44543322
Q ss_pred CEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCC
Q 003024 659 GYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE 738 (856)
Q Consensus 659 G~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~ 738 (856)
+..+ .|..++. .+ .+++.+ .+.+.
T Consensus 572 ~~~v----------------------------------~g~~l~~-----------~~-------~~~l~~----~~~~~ 595 (884)
T TIGR01522 572 SQSV----------------------------------SGEKLDA-----------MD-------DQQLSQ----IVPKV 595 (884)
T ss_pred Ccee----------------------------------EhHHhHh-----------CC-------HHHHHH----HhhcC
Confidence 1111 0000000 00 011211 22111
Q ss_pred CeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC
Q 003024 739 PAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK 818 (856)
Q Consensus 739 ~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 818 (856)
.-+-.+.| -.|...++.+-+. | +.|+++||+.||.++++.|+. +|++|..
T Consensus 596 -------~Vfar~~P--~~K~~iv~~lq~~----g---~~v~mvGDGvND~pAl~~AdV--------------Gia~g~~ 645 (884)
T TIGR01522 596 -------AVFARASP--EHKMKIVKALQKR----G---DVVAMTGDGVNDAPALKLADI--------------GVAMGQT 645 (884)
T ss_pred -------eEEEECCH--HHHHHHHHHHHHC----C---CEEEEECCCcccHHHHHhCCe--------------eEecCCC
Confidence 11222333 3476666665332 3 679999999999999999984 6788742
Q ss_pred -----ccccceEc--CChhHHHHHHH
Q 003024 819 -----PSKAKYYL--DDAAEVVTMLE 837 (856)
Q Consensus 819 -----~s~A~y~l--~~~~eV~~~L~ 837 (856)
+..|++++ ++...+.++++
T Consensus 646 g~~va~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 646 GTDVAKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred cCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence 35688888 55777766654
No 218
>PRK08238 hypothetical protein; Validated
Probab=96.40 E-value=0.019 Score=66.92 Aligned_cols=34 Identities=6% Similarity=0.092 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhc
Q 003024 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (856)
Q Consensus 613 s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 647 (856)
.+.+.+.|+++ ++.|.+++|+|+.+...++....
T Consensus 74 ~pga~e~L~~l-k~~G~~v~LaTas~~~~a~~i~~ 107 (479)
T PRK08238 74 NEEVLDYLRAE-RAAGRKLVLATASDERLAQAVAA 107 (479)
T ss_pred ChhHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHH
Confidence 46777788885 77788888888888777776663
No 219
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.35 E-value=0.0059 Score=62.54 Aligned_cols=34 Identities=15% Similarity=-0.041 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHH
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEI 794 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ 794 (856)
+...+..+++.+ |++++++++|||+.+|+.+-+.
T Consensus 163 ~p~~~~~~~~~~---~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 163 NPEPLILAAKAL---GVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred CHHHHHHHHHHh---CcCcccEEEEeCCHHHHHHHHh
Confidence 677788888988 9999999999999999987654
No 220
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=96.35 E-value=0.0045 Score=63.72 Aligned_cols=37 Identities=11% Similarity=0.131 Sum_probs=31.2
Q ss_pred CCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003024 611 APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 611 ~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
.+-+.+.++|+.| ++.|+.++++||-+..........
T Consensus 127 ~~~~~~~~~l~~L-~~~Gi~~~i~TGD~~~~a~~~~~~ 163 (215)
T PF00702_consen 127 PLRPGAKEALQEL-KEAGIKVAILTGDNESTASAIAKQ 163 (215)
T ss_dssp EBHTTHHHHHHHH-HHTTEEEEEEESSEHHHHHHHHHH
T ss_pred cchhhhhhhhhhh-hccCcceeeeeccccccccccccc
Confidence 3456789999997 778999999999999999888843
No 221
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=96.34 E-value=0.019 Score=64.19 Aligned_cols=47 Identities=21% Similarity=0.326 Sum_probs=38.0
Q ss_pred CcEEEEEecCCCCCCCCC--------CCCCCCHHHHHHHHHHHhhCCCeEEEecCC
Q 003024 590 KSRAILFDYDGTVMPQTS--------INKAPSQAVISIINTLCNDARNTVFVVSGR 637 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~--------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR 637 (856)
|.|++++|.||||+...+ ....+-+.+.+.|..| +++|.+++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~L-k~~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKL-QKAGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHH-HhCCCeEEEEECC
Confidence 578999999999998432 1234668899999997 8889999999986
No 222
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=96.27 E-value=0.017 Score=71.14 Aligned_cols=64 Identities=8% Similarity=0.058 Sum_probs=50.8
Q ss_pred HHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003024 584 SAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 584 ~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
+.+.....+.+++=+||+++..-.-..++-+...++|++| ++.|+.++++||........+.+.
T Consensus 541 ~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L-~~~gi~~~llTGd~~~~a~~ia~~ 604 (741)
T PRK11033 541 NELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISEL-KALGIKGVMLTGDNPRAAAAIAGE 604 (741)
T ss_pred HHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHH
Confidence 4455666788888899987742113456789999999997 888999999999999999998843
No 223
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.21 E-value=0.016 Score=59.25 Aligned_cols=38 Identities=18% Similarity=0.129 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
+....+.+++++ |++++++++|||+.+|+..-+.+|..
T Consensus 150 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 150 APQVYQLALEAL---GVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred CHHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 567788999999 99999999999999999999999973
No 224
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=96.15 E-value=0.044 Score=56.61 Aligned_cols=37 Identities=11% Similarity=0.129 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
.....+.+++++ |++++++++|||+..|+.+-+.+|.
T Consensus 154 ~p~~~~~~~~~~---g~~~~~~l~i~D~~~di~aA~~aG~ 190 (211)
T TIGR02247 154 DPRIYQLMLERL---GVAPEECVFLDDLGSNLKPAAALGI 190 (211)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHcCC
Confidence 356788888998 9999999999999999999999996
No 225
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=96.14 E-value=0.37 Score=53.43 Aligned_cols=47 Identities=19% Similarity=0.354 Sum_probs=35.9
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhC----CCeEEEec---CCChhhHHH
Q 003024 593 AILFDYDGTVMPQTSINKAPSQAVISIINTLCNDA----RNTVFVVS---GRGRDCLGK 644 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~----g~~V~I~T---GR~~~~l~~ 644 (856)
.|+||+||||.. ...+-+...++|+.| ... |..+.++| |++.....+
T Consensus 2 ~~ifD~DGvL~~----g~~~i~ga~eal~~L-~~~~~~~g~~~~flTNn~g~s~~~~~~ 55 (321)
T TIGR01456 2 GFAFDIDGVLFR----GKKPIAGASDALRRL-NRNQGQLKIPYIFLTNGGGFSERARAE 55 (321)
T ss_pred EEEEeCcCceEC----CccccHHHHHHHHHH-hccccccCCCEEEEecCCCCCHHHHHH
Confidence 589999999997 345588999999998 666 88888777 555665433
No 226
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.14 E-value=0.0016 Score=59.31 Aligned_cols=55 Identities=22% Similarity=0.444 Sum_probs=39.5
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCcc
Q 003024 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLG 653 (856)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lg 653 (856)
|++|+||||.. ..++-+.+.++|++| ++.|.+++++|-.+...-..+...+..+|
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L-~~~g~~~~~lTNns~~s~~~~~~~L~~~G 55 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDAL-RERGKPVVFLTNNSSRSREEYAKKLKKLG 55 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHH-HHTTSEEEEEES-SSS-HHHHHHHHHHTT
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHH-HHcCCCEEEEeCCCCCCHHHHHHHHHhcC
Confidence 68999999997 456678889999998 88899999999877655444443333333
No 227
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.08 E-value=0.012 Score=61.33 Aligned_cols=64 Identities=19% Similarity=0.252 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCCCc-------cccceEcCChh
Q 003024 759 GVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQKP-------SKAKYYLDDAA 830 (856)
Q Consensus 759 G~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-------s~A~y~l~~~~ 830 (856)
...-+.+++++ |+++++++.|||+. ||+...+.+|.. +|-+.... ....+.+.+..
T Consensus 157 ~~~f~~~~~~~---g~~p~~~l~VgD~~~~di~gA~~~G~~-------------~vwi~~~~~~~~~~~~~~~~~i~~l~ 220 (229)
T COG1011 157 PEIFEYALEKL---GVPPEEALFVGDSLENDILGARALGMK-------------TVWINRGGKPLPDALEAPDYEISSLA 220 (229)
T ss_pred cHHHHHHHHHc---CCCcceEEEECCChhhhhHHHHhcCcE-------------EEEECCCCCCCCCCccCCceEEcCHH
Confidence 45667888888 99999999999985 887999999873 45444322 34566677777
Q ss_pred HHHHHHHH
Q 003024 831 EVVTMLEA 838 (856)
Q Consensus 831 eV~~~L~~ 838 (856)
++..++..
T Consensus 221 ~l~~~~~~ 228 (229)
T COG1011 221 ELLDLLER 228 (229)
T ss_pred HHHHHHhh
Confidence 77777654
No 228
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=96.00 E-value=0.0099 Score=62.26 Aligned_cols=52 Identities=10% Similarity=0.089 Sum_probs=40.4
Q ss_pred eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 740 AAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 740 ~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
-.++.+.....-+| ....-...+++| |..|+++++|.|+.+.+..-+++|..
T Consensus 130 ~~~v~~~dv~~~KP----~Pd~yL~Aa~~L---gv~P~~CvviEDs~~Gi~Aa~aAGm~ 181 (221)
T COG0637 130 DVIVTADDVARGKP----APDIYLLAAERL---GVDPEECVVVEDSPAGIQAAKAAGMR 181 (221)
T ss_pred chhccHHHHhcCCC----CCHHHHHHHHHc---CCChHHeEEEecchhHHHHHHHCCCE
Confidence 34445555555566 556666777778 99999999999999999999999973
No 229
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.94 E-value=0.16 Score=55.15 Aligned_cols=166 Identities=16% Similarity=0.209 Sum_probs=115.0
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHh-------CCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC
Q 003024 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQ-------HPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFG 407 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi~~~l~A~~~ll~~-------~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~ 407 (856)
...++++--...+-..+.-++.|.+..-++ +|. + |.+|. |.||..+.+.++|++.
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~----l-lciIT----GKGPlkE~Y~~~I~~~--------- 315 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPS----L-LCIIT----GKGPLKEKYSQEIHEK--------- 315 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCc----E-EEEEc----CCCchhHHHHHHHHHh---------
Confidence 457888888999999999999999854221 232 2 34444 5788888888888776
Q ss_pred CCCcccEEEEcCCCCHHHHHHHHHhcce--eeeccccccCCCc--ccceeeeecCCCCCCCCCCCCCCCCceEEecCCcc
Q 003024 408 RPGYEPVVFIDKPVTLSERAAYYTIAEC--VVVTAVRDGMNLT--PYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG 483 (856)
Q Consensus 408 ~~~~~pvv~~~~~v~~~el~aly~~ADv--~vvtS~~EG~nLv--~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 483 (856)
.|+.|.+..--++-++.+.++..||. |+=||. -|.-|. +..-.-| +-|+++-.|.-
T Consensus 316 --~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGc-----------------glPvcA~~fkc 375 (444)
T KOG2941|consen 316 --NLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGC-----------------GLPVCAVNFKC 375 (444)
T ss_pred --cccceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcC-----------------CCceeeecchh
Confidence 77788888888999999999999995 555554 344443 3344445 33777778875
Q ss_pred ccccc---CCceeeCCCCHHHHHHHHHHHHc-C--CHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHH
Q 003024 484 CSPSL---SGAIRVNPWNIEATAEAMHEAIQ-M--NEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (856)
Q Consensus 484 ~~~~l---~~al~VnP~d~~~~A~ai~~aL~-m--~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (856)
..|.+ .+|++++ |.+++|+.|..+.+ . +..+- .+.++.+.+....+|.+++-+..
T Consensus 376 l~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l----~~lkkn~~e~~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 376 LDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADEL----NQLKKNLREEQELRWDESWERTA 436 (444)
T ss_pred HHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHH----HHHHHhhHHHHhhhHHHHHHHhh
Confidence 55555 3599986 89999999999987 2 22222 23344455556688888775543
No 230
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=95.90 E-value=0.028 Score=71.63 Aligned_cols=43 Identities=21% Similarity=0.189 Sum_probs=36.4
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEE
Q 003024 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIA 655 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgli 655 (856)
...+-+++.++++++ ++.|+.|+++|||....+..... .++++
T Consensus 566 ~Dplr~~v~~aI~~l-~~~Gi~v~~~TGd~~~ta~~ia~---~~gi~ 608 (997)
T TIGR01106 566 IDPPRAAVPDAVGKC-RSAGIKVIMVTGDHPITAKAIAK---GVGII 608 (997)
T ss_pred cCCChHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCC
Confidence 456779999999995 89999999999999999999885 44554
No 231
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=95.83 E-value=0.044 Score=66.33 Aligned_cols=65 Identities=9% Similarity=0.093 Sum_probs=50.4
Q ss_pred HHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003024 583 VSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 583 ~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
.+.+.+...+.+++-.|++++..-.....+-+++.+++++| ++.|++++++||-.......+..+
T Consensus 417 ~~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~L-r~~GI~vvMiTGDn~~TA~aIA~e 481 (679)
T PRK01122 417 VDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAEL-RKMGIKTVMITGDNPLTAAAIAAE 481 (679)
T ss_pred HHHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH
Confidence 34455556677777789888752223456789999999995 999999999999999999998843
No 232
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.77 E-value=0.032 Score=54.54 Aligned_cols=59 Identities=19% Similarity=0.247 Sum_probs=51.7
Q ss_pred HcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003024 587 LRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 587 ~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
++..+|-|++|+|.||++. .+...++++++=+.++ ++.|+.++|+|--+..-+..+...
T Consensus 24 ~~~Gikgvi~DlDNTLv~w--d~~~~tpe~~~W~~e~-k~~gi~v~vvSNn~e~RV~~~~~~ 82 (175)
T COG2179 24 KAHGIKGVILDLDNTLVPW--DNPDATPELRAWLAEL-KEAGIKVVVVSNNKESRVARAAEK 82 (175)
T ss_pred HHcCCcEEEEeccCceecc--cCCCCCHHHHHHHHHH-HhcCCEEEEEeCCCHHHHHhhhhh
Confidence 4567999999999999985 4667889999999997 889999999999999999888843
No 233
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=95.74 E-value=0.02 Score=57.84 Aligned_cols=37 Identities=14% Similarity=0.165 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
+....+.+++++ |..++++++|||+..|+..-+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~l~vgD~~~di~aA~~~G~ 179 (184)
T TIGR01993 143 SPQAYEKALREA---GVDPERAIFFDDSARNIAAAKALGM 179 (184)
T ss_pred CHHHHHHHHHHh---CCCccceEEEeCCHHHHHHHHHcCC
Confidence 567888999999 9999999999999999999999986
No 234
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=95.72 E-value=0.032 Score=70.58 Aligned_cols=40 Identities=15% Similarity=0.236 Sum_probs=34.7
Q ss_pred CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003024 608 INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 608 ~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
...++-+++.++|++| ++.|++++++||............
T Consensus 534 ~~Dplr~~v~e~I~~l-~~aGI~v~miTGD~~~tA~~ia~~ 573 (917)
T TIGR01116 534 MLDPPRPEVADAIEKC-RTAGIRVIMITGDNKETAEAICRR 573 (917)
T ss_pred eeCCCchhHHHHHHHH-HHCCCEEEEecCCCHHHHHHHHHH
Confidence 3456789999999996 999999999999999999888843
No 235
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=95.72 E-value=0.053 Score=65.58 Aligned_cols=69 Identities=9% Similarity=0.143 Sum_probs=49.9
Q ss_pred HHHHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003024 579 IDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 579 ~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
++...+.+.+...+.++.-.|++++..-.....+-+++.+++++| ++.|++++++||-..........+
T Consensus 409 ~~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~L-r~~GI~vvMiTGDn~~TA~aIA~e 477 (673)
T PRK14010 409 LDALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFREL-REMGIETVMCTGDNELTAATIAKE 477 (673)
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH
Confidence 344445555555565555457777642113456789999999995 889999999999999999998843
No 236
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=95.68 E-value=0.062 Score=68.28 Aligned_cols=138 Identities=18% Similarity=0.220 Sum_probs=88.5
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHH
Q 003024 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPV 688 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i 688 (856)
...+-+++.+++++| ++.|++++++||........... .+|+...++..+.
T Consensus 577 ~Dplr~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~iA~---~~GI~~~~~~vi~------------------------- 627 (941)
T TIGR01517 577 KDPLRPGVREAVQEC-QRAGITVRMVTGDNIDTAKAIAR---NCGILTFGGLAME------------------------- 627 (941)
T ss_pred cCCCchhHHHHHHHH-HHCCCEEEEECCCChHHHHHHHH---HcCCCCCCceEee-------------------------
Confidence 446778999999995 88999999999999999999884 4455433221110
Q ss_pred HHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 003024 689 MKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTT 768 (856)
Q Consensus 689 ~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 768 (856)
|..++ ... .+++.+ .+.+. .-+-.+.|. .|...++.+.++
T Consensus 628 ---------G~~~~-----------~l~-------~~el~~----~i~~~-------~Vfar~sPe--~K~~iV~~lq~~ 667 (941)
T TIGR01517 628 ---------GKEFR-----------RLV-------YEEMDP----ILPKL-------RVLARSSPL--DKQLLVLMLKDM 667 (941)
T ss_pred ---------HHHhh-----------hCC-------HHHHHH----HhccC-------eEEEECCHH--HHHHHHHHHHHC
Confidence 00000 000 011222 22111 123445564 488888887553
Q ss_pred hhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeC-CC----ccccceEcC--ChhHHHHHH
Q 003024 769 MAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVG-QK----PSKAKYYLD--DAAEVVTML 836 (856)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~----~s~A~y~l~--~~~eV~~~L 836 (856)
| .-|.++||+.||.++++.|.. ++++| .. +..|++++- +...+.+++
T Consensus 668 ----g---~vVam~GDGvNDapALk~AdV--------------GIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 668 ----G---EVVAVTGDGTNDAPALKLADV--------------GFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred ----C---CEEEEECCCCchHHHHHhCCc--------------ceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 3 469999999999999999984 67887 32 567888874 456665555
No 237
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=95.61 E-value=0.092 Score=53.56 Aligned_cols=45 Identities=18% Similarity=0.347 Sum_probs=38.0
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHH
Q 003024 747 FIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDM 791 (856)
Q Consensus 747 ~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~M 791 (856)
+.....|.+.=||..+..+.......|+..+.++++||+.||+.-
T Consensus 153 hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP 197 (256)
T KOG3120|consen 153 HSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCP 197 (256)
T ss_pred CccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCc
Confidence 444457888889999999988777779999999999999999843
No 238
>PTZ00445 p36-lilke protein; Provisional
Probab=95.46 E-value=0.028 Score=57.41 Aligned_cols=159 Identities=18% Similarity=0.182 Sum_probs=96.7
Q ss_pred CHHHHHHHHHcCCcEEEEEecCCCCCCCCC---CCCC---------CCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHh
Q 003024 578 SIDAIVSAYLRSKSRAILFDYDGTVMPQTS---INKA---------PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKW 645 (856)
Q Consensus 578 ~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~---~~~~---------~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~ 645 (856)
.++.+++.+++..+|+|++|+|-||+..-+ .+.. ++++....+++| .+.|+.|+|+|=-+...
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l-~~~~I~v~VVTfSd~~~---- 104 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRL-KNSNIKISVVTFSDKEL---- 104 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHH-HHCCCeEEEEEccchhh----
Confidence 356678888999999999999999997111 1222 689999999996 88999999999554433
Q ss_pred hcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHH
Q 003024 646 FSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAK 725 (856)
Q Consensus 646 ~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~ 725 (856)
+ +. ..++.+|. |+ +.++..++.- ....-++. ++.|. |.+. +..
T Consensus 105 ~---~~----~~~~~~Is--g~---------------~li~~~lk~s---~~~~~i~~-----~~~yy---p~~w--~~p 147 (219)
T PTZ00445 105 I---PS----ENRPRYIS--GD---------------RMVEAALKKS---KCDFKIKK-----VYAYY---PKFW--QEP 147 (219)
T ss_pred c---cc----cCCcceec--hH---------------HHHHHHHHhc---Cccceeee-----eeeeC---Cccc--CCh
Confidence 1 10 01122221 11 1222222210 00111111 11111 1111 111
Q ss_pred HHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 726 ELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 726 el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
.....+ =-++|....|-.=++.++++. |+.|++++.|=|+....+..+.+|..
T Consensus 148 ~~y~~~-----------------gl~KPdp~iK~yHle~ll~~~---gl~peE~LFIDD~~~NVeaA~~lGi~ 200 (219)
T PTZ00445 148 SDYRPL-----------------GLDAPMPLDKSYHLKQVCSDF---NVNPDEILFIDDDMNNCKNALKEGYI 200 (219)
T ss_pred hhhhhh-----------------cccCCCccchHHHHHHHHHHc---CCCHHHeEeecCCHHHHHHHHHCCCE
Confidence 111111 113567777888889999999 99999999999999999999999863
No 239
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=95.34 E-value=0.031 Score=56.46 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhc
Q 003024 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (856)
Q Consensus 614 ~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 647 (856)
+.+.+.|+.+ ++.|..|+|+||-....++.+..
T Consensus 92 ~~~~e~i~~~-~~~~~~v~IvS~~~~~~i~~~~~ 124 (192)
T PF12710_consen 92 PDAMELIREL-KDNGIKVVIVSGSPDEIIEPIAE 124 (192)
T ss_dssp TTHHHHHHHH-HHTTSEEEEEEEEEHHHHHHHHH
T ss_pred hhHHHHHHHH-HHCCCEEEEECCCcHHHHHHHHH
Confidence 5667888886 77899999999998888888874
No 240
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=95.33 E-value=0.031 Score=59.06 Aligned_cols=64 Identities=19% Similarity=0.284 Sum_probs=45.8
Q ss_pred cccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCCC-------------------------------CCCCCHHHHHHHHH
Q 003024 574 FRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSI-------------------------------NKAPSQAVISIINT 622 (856)
Q Consensus 574 f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~-------------------------------~~~~s~~~~~aL~~ 622 (856)
..-.++++|.+.-+..+.-.|++|+|||+++.++. ...|-+.+.+.|+.
T Consensus 46 ~~~~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~ 125 (237)
T PRK11009 46 VHWVSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eeEEEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHH
Confidence 34478899998876666669999999999962110 00122347788888
Q ss_pred HHhhCCCeEEEecCCC
Q 003024 623 LCNDARNTVFVVSGRG 638 (856)
Q Consensus 623 L~~d~g~~V~I~TGR~ 638 (856)
| ++.|+.++++|||+
T Consensus 126 L-~~~G~~I~iVTnR~ 140 (237)
T PRK11009 126 H-VKRGDSIYFITGRT 140 (237)
T ss_pred H-HHCCCeEEEEeCCC
Confidence 6 77888999999986
No 241
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.12 E-value=0.034 Score=58.15 Aligned_cols=56 Identities=16% Similarity=0.213 Sum_probs=43.3
Q ss_pred CcEEEEEecCCCCCCCCC-----------------------CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhh---HH
Q 003024 590 KSRAILFDYDGTVMPQTS-----------------------INKAPSQAVISIINTLCNDARNTVFVVSGRGRDC---LG 643 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~-----------------------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~---l~ 643 (856)
.+-+++||+|-|+++..+ ....+-+.++++++.| ++.|+.|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l-~~~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKI-IELGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHH
Confidence 467999999999997221 1234568899999996 88999999999999765 44
Q ss_pred Hhh
Q 003024 644 KWF 646 (856)
Q Consensus 644 ~~~ 646 (856)
+++
T Consensus 155 ~nL 157 (229)
T TIGR01675 155 DNL 157 (229)
T ss_pred HHH
Confidence 554
No 242
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=95.11 E-value=0.032 Score=52.14 Aligned_cols=54 Identities=22% Similarity=0.348 Sum_probs=42.4
Q ss_pred CCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC--Cc----cccceEcCChhHHHHHHHHH
Q 003024 773 GRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ--KP----SKAKYYLDDAAEVVTMLEAL 839 (856)
Q Consensus 773 gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~----s~A~y~l~~~~eV~~~L~~L 839 (856)
+.+.+.++++||+.||+.|++.+... -|++++ .+ -.|++++.+..+++.++...
T Consensus 90 kk~~~k~vmVGnGaND~laLr~ADlG-------------I~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 90 KKRYEKVVMVGNGANDILALREADLG-------------ICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCCCcEEEEecCCcchHHHhhhcccc-------------eEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 45668999999999999999999764 356664 34 45888889999888887654
No 243
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=95.05 E-value=0.12 Score=66.58 Aligned_cols=47 Identities=13% Similarity=0.125 Sum_probs=37.9
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCC
Q 003024 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHG 659 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG 659 (856)
...+-+++.+++++| ++.|+.++++||........... .+|++..++
T Consensus 654 ~d~lr~~~~~~I~~l-~~agi~v~miTGD~~~TA~~iA~---~~gii~~~~ 700 (1054)
T TIGR01657 654 ENPLKPDTKEVIKEL-KRASIRTVMITGDNPLTAVHVAR---ECGIVNPSN 700 (1054)
T ss_pred ecCCCccHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCCCCCc
Confidence 345778999999996 88999999999999999999884 455654443
No 244
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=95.04 E-value=0.19 Score=63.47 Aligned_cols=136 Identities=18% Similarity=0.241 Sum_probs=86.5
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHH
Q 003024 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPV 688 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i 688 (856)
...|-+++.+++++| ++.|++|+++||-.........+. +|+. ++..+ .
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~---lGI~--~~~v~------------~------------- 596 (902)
T PRK10517 548 LDPPKETTAPALKAL-KASGVTVKILTGDSELVAAKVCHE---VGLD--AGEVL------------I------------- 596 (902)
T ss_pred hCcchhhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHH---cCCC--ccCce------------e-------------
Confidence 446779999999995 889999999999999999998844 4441 11000 0
Q ss_pred HHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 003024 689 MKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTT 768 (856)
Q Consensus 689 ~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 768 (856)
|..++. .+ .+++.+.++ + ..-+-.+.|. .|-..++.+.++
T Consensus 597 ---------G~el~~-----------l~-------~~el~~~~~----~-------~~VfAr~sPe--~K~~IV~~Lq~~ 636 (902)
T PRK10517 597 ---------GSDIET-----------LS-------DDELANLAE----R-------TTLFARLTPM--HKERIVTLLKRE 636 (902)
T ss_pred ---------HHHHHh-----------CC-------HHHHHHHHh----h-------CcEEEEcCHH--HHHHHHHHHHHC
Confidence 000000 00 112222221 1 1234455564 488888887543
Q ss_pred hhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEc--CChhHHHHHH
Q 003024 769 MAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYL--DDAAEVVTML 836 (856)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~~~~eV~~~L 836 (856)
| .-|.++||+.||.+.++.|. +++++|+. +..|+.++ ++...+.+.+
T Consensus 637 ----G---~vVam~GDGvNDaPALk~AD--------------VGIAmg~gtdvAkeaADiVLldd~~~~I~~ai 689 (902)
T PRK10517 637 ----G---HVVGFMGDGINDAPALRAAD--------------IGISVDGAVDIAREAADIILLEKSLMVLEEGV 689 (902)
T ss_pred ----C---CEEEEECCCcchHHHHHhCC--------------EEEEeCCcCHHHHHhCCEEEecCChHHHHHHH
Confidence 3 56999999999999999998 46788754 56777776 3445554444
No 245
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=95.02 E-value=0.064 Score=45.81 Aligned_cols=59 Identities=20% Similarity=0.308 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhhhcCCCcceEEEEeCC-chhHHHHHHccccccCCCCCCCccEEEEEeCCC--------ccccceEcCCh
Q 003024 759 GVVAEKIFTTMAESGRHADFVLCIGDD-RSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--------PSKAKYYLDDA 829 (856)
Q Consensus 759 G~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------~s~A~y~l~~~ 829 (856)
...++.+++.+ +++++++++|||+ .+|+.+-+.+|.. .+.|..|.. ...++|++++.
T Consensus 7 p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~-----------~ilV~tG~~~~~~~~~~~~~pd~vv~~l 72 (75)
T PF13242_consen 7 PGMLEQALKRL---GVDPSRCVMVGDSLETDIEAAKAAGID-----------TILVLTGVYSPEDLEKAEHKPDYVVDDL 72 (75)
T ss_dssp HHHHHHHHHHH---TSGGGGEEEEESSTTTHHHHHHHTTSE-----------EEEESSSSSCCCGHHHSSSTTSEEESSG
T ss_pred HHHHHHHHHHc---CCCHHHEEEEcCCcHhHHHHHHHcCCc-----------EEEECCCCCCHHHHhccCCCCCEEECCH
Confidence 34567788888 9999999999999 9999999999973 245555542 24777888876
Q ss_pred hH
Q 003024 830 AE 831 (856)
Q Consensus 830 ~e 831 (856)
.|
T Consensus 73 ~e 74 (75)
T PF13242_consen 73 KE 74 (75)
T ss_dssp GG
T ss_pred Hh
Confidence 54
No 246
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=94.99 E-value=0.097 Score=67.38 Aligned_cols=185 Identities=14% Similarity=0.120 Sum_probs=93.9
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCccc-HHHHHHH
Q 003024 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFG-WIQIAEP 687 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~-w~~~v~~ 687 (856)
..++-+.+.+++++| ++.|++|+++||-....+...... .+++..+.-.+...+... .+.. ....+..
T Consensus 629 eD~lq~~v~etI~~L-~~AGIkv~mlTGD~~~TA~~IA~~---~~ii~~~~~~~~i~~~~~-------~~~~~~~~~i~~ 697 (1057)
T TIGR01652 629 EDKLQEGVPETIELL-RQAGIKIWVLTGDKVETAINIGYS---CRLLSRNMEQIVITSESL-------DATRSVEAAIKF 697 (1057)
T ss_pred hhhhhhccHHHHHHH-HHCCCeEEEEcCCcHHHHHHHHHH---hCCCCCCCeEEEEecCch-------hhhHHHHHHHHH
Confidence 445677888888886 888999999999999999888743 344444332222222110 0000 0011111
Q ss_pred HHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHH
Q 003024 688 VMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFT 767 (856)
Q Consensus 688 i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~ 767 (856)
.......... .....+...+...-. .+......++.+++.+.+...... -+-.+.|. .|+..++.+-+
T Consensus 698 ~~~~~~~~~~-~~~~~~~~~lvi~G~----~l~~~l~~~~~~~f~~l~~~~~~v-----V~aR~sP~--qK~~IV~~lk~ 765 (1057)
T TIGR01652 698 GLEGTSEEFN-NLGDSGNVALVIDGK----SLGYALDEELEKEFLQLALKCKAV-----ICCRVSPS--QKADVVRLVKK 765 (1057)
T ss_pred HHHHHHHhhh-hhccCCceEEEEccH----HHHHHHhhHHHHHHHHHHhhCCEE-----EEeCCCHH--HHHHHHHHHHh
Confidence 1110000000 000011111111100 000000011222333333222111 23344554 59999988865
Q ss_pred HhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEe-CC----CccccceEcCChhHHHHHH
Q 003024 768 TMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTV-GQ----KPSKAKYYLDDAAEVVTML 836 (856)
Q Consensus 768 ~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v-G~----~~s~A~y~l~~~~eV~~~L 836 (856)
.. -.-|+++||+.||.+|++.|.. +|.+ |. +...|+|.+.+-..+.++|
T Consensus 766 ~~------~~~vl~iGDG~ND~~mlk~AdV--------------GIgi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 766 ST------GKTTLAIGDGANDVSMIQEADV--------------GVGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred cC------CCeEEEEeCCCccHHHHhhcCe--------------eeEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 42 2469999999999999999985 4443 32 3456888887755555554
No 247
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=94.99 E-value=0.028 Score=56.07 Aligned_cols=35 Identities=14% Similarity=0.187 Sum_probs=30.1
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcc
Q 003024 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIG 796 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 796 (856)
.|+.++..+.+ +.+...++++||+.||++|..-+.
T Consensus 159 gKa~~i~~lrk-----~~~~~~~~mvGDGatDlea~~pa~ 193 (227)
T KOG1615|consen 159 GKAEVIALLRK-----NYNYKTIVMVGDGATDLEAMPPAD 193 (227)
T ss_pred ccHHHHHHHHh-----CCChheeEEecCCccccccCCchh
Confidence 59999999888 567889999999999999887744
No 248
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=94.93 E-value=0.24 Score=62.56 Aligned_cols=137 Identities=18% Similarity=0.214 Sum_probs=87.9
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHH
Q 003024 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPV 688 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i 688 (856)
...+-+++.+++++| ++.|+.|+++||-.......+.+. +|+. .+..+
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~aIA~~---lGI~--~~~vi-------------------------- 595 (903)
T PRK15122 548 LDPPKESAAPAIAAL-RENGVAVKVLTGDNPIVTAKICRE---VGLE--PGEPL-------------------------- 595 (903)
T ss_pred cCccHHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH---cCCC--CCCcc--------------------------
Confidence 446779999999995 999999999999999999998844 4442 11000
Q ss_pred HHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 003024 689 MKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTT 768 (856)
Q Consensus 689 ~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 768 (856)
.|..++. .+ .+++.+.+ .+ -.-+-.+.|. .|-..++.+.++
T Consensus 596 --------~G~el~~-----------~~-------~~el~~~v----~~-------~~VfAr~sPe--~K~~iV~~Lq~~ 636 (903)
T PRK15122 596 --------LGTEIEA-----------MD-------DAALAREV----EE-------RTVFAKLTPL--QKSRVLKALQAN 636 (903)
T ss_pred --------chHhhhh-----------CC-------HHHHHHHh----hh-------CCEEEEeCHH--HHHHHHHHHHhC
Confidence 0100000 00 11222222 11 1234456664 488888887553
Q ss_pred hhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEc--CChhHHHHHHH
Q 003024 769 MAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYL--DDAAEVVTMLE 837 (856)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~~~~eV~~~L~ 837 (856)
| .-|.++||+.||.++++.|. +++++|+. +..|+.++ ++...+.+.++
T Consensus 637 ----G---~vVamtGDGvNDaPALk~AD--------------VGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 637 ----G---HTVGFLGDGINDAPALRDAD--------------VGISVDSGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred ----C---CEEEEECCCchhHHHHHhCC--------------EEEEeCcccHHHHHhcCEEEecCChHHHHHHHH
Confidence 3 56999999999999999998 46888753 57788877 34555554443
No 249
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=94.89 E-value=0.098 Score=55.68 Aligned_cols=85 Identities=25% Similarity=0.501 Sum_probs=56.7
Q ss_pred HHHHHHHHHcCC---CCCEEEEeCcccchHHHHHHhhcC------CCeEEEEEccC-C----CChHHHh--cCCch----
Q 003024 188 IFSQRVIEVINP---EDDYVWIHDYHLMVLPTFLRRRFT------RLRMGFFLHSP-F----PSSEIYR--TLPVR---- 247 (856)
Q Consensus 188 ~fa~~i~~~~~~---~~D~VwihDyhl~llp~~lr~~~~------~~~i~~flH~P-f----P~~e~~~--~lp~r---- 247 (856)
.|+.++++.++. ..|+|++||+|-.++|.+|+.... ++|+.|.+|-. | |. +.+. -+|+.
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~~~~~~~ 196 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLPDEYFQN 196 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-GGGGS-S
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCCHHHhcc
Confidence 444444444321 239999999999999999998763 69999999953 2 22 1211 13321
Q ss_pred ----------HHHHHHhHhCCEEcccCHHHHHHHHH
Q 003024 248 ----------EEILKALLNADLIGFHTFDYARHFLS 273 (856)
Q Consensus 248 ----------~eil~~ll~~dligf~t~~~~~~Fl~ 273 (856)
.-+--|+..||.|-.-++.|++.-++
T Consensus 197 ~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 197 LDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp TTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred ccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 23455799999999999999887654
No 250
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=94.75 E-value=0.29 Score=60.66 Aligned_cols=167 Identities=19% Similarity=0.201 Sum_probs=100.3
Q ss_pred HHHHcCCcEEEEEec---CC--CCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeC
Q 003024 584 SAYLRSKSRAILFDY---DG--TVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEH 658 (856)
Q Consensus 584 ~~y~~s~~rlI~~Dl---DG--TLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaen 658 (856)
+.+.....|.+++=+ ++ +++..-.-...|-+++.+++++| ++.|++|+++||........+.++ +|+..
T Consensus 410 ~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~---lGI~~-- 483 (755)
T TIGR01647 410 DELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERA-RHLGVEVKMVTGDHLAIAKETARR---LGLGT-- 483 (755)
T ss_pred HHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH---cCCCC--
Confidence 334445567777655 33 44432113556789999999995 899999999999999999999854 44421
Q ss_pred CEEEEeCCCcceEecCCCCcccHHHHHHHHHHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCC
Q 003024 659 GYFMRWSADEEWQNCGQSVDFGWIQIAEPVMKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANE 738 (856)
Q Consensus 659 G~~I~~~~~~~w~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~ 738 (856)
. +. .+. .+ . .|.. .... ..+++.+.+++ .
T Consensus 484 ~--~~-~~~----------------~l-------~---~~~~-----------~~~~-------~~~~~~~~~~~----~ 512 (755)
T TIGR01647 484 N--IY-TAD----------------VL-------L---KGDN-----------RDDL-------PSGELGEMVED----A 512 (755)
T ss_pred C--Cc-CHH----------------Hh-------c---CCcc-----------hhhC-------CHHHHHHHHHh----C
Confidence 0 00 000 00 0 0100 0000 01223332221 1
Q ss_pred CeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC
Q 003024 739 PAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK 818 (856)
Q Consensus 739 ~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 818 (856)
.-+-++.|. .|-..++.+.++ | .-|.++||+.||.+.++.|.. ++++|+.
T Consensus 513 -------~vfAr~~Pe--~K~~iV~~lq~~----G---~~VamvGDGvNDapAL~~AdV--------------GIAm~~g 562 (755)
T TIGR01647 513 -------DGFAEVFPE--HKYEIVEILQKR----G---HLVGMTGDGVNDAPALKKADV--------------GIAVAGA 562 (755)
T ss_pred -------CEEEecCHH--HHHHHHHHHHhc----C---CEEEEEcCCcccHHHHHhCCe--------------eEEecCC
Confidence 234556675 488888887543 3 569999999999999999984 6777753
Q ss_pred ----ccccceEc--CChhHHHHHHH
Q 003024 819 ----PSKAKYYL--DDAAEVVTMLE 837 (856)
Q Consensus 819 ----~s~A~y~l--~~~~eV~~~L~ 837 (856)
+..|+.++ ++...+...++
T Consensus 563 tdvAkeaADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 563 TDAARSAADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred cHHHHHhCCEEEEcCChHHHHHHHH
Confidence 56677776 34555555443
No 251
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=94.74 E-value=0.24 Score=62.40 Aligned_cols=137 Identities=18% Similarity=0.206 Sum_probs=85.9
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHH
Q 003024 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPV 688 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i 688 (856)
...+-+++.+++++| ++.|++++++||-.........+. +|+.. +-.+ .
T Consensus 513 ~Dp~R~~~~~aI~~l-~~aGI~vvmiTGD~~~tA~aIA~~---lGI~~--~~v~------------~------------- 561 (867)
T TIGR01524 513 LDPPKESTKEAIAAL-FKNGINVKVLTGDNEIVTARICQE---VGIDA--NDFL------------L------------- 561 (867)
T ss_pred eCCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHH---cCCCC--CCee------------e-------------
Confidence 346779999999995 999999999999999999888843 44421 0000 0
Q ss_pred HHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 003024 689 MKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTT 768 (856)
Q Consensus 689 ~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 768 (856)
|..++. .+ .+++.+.+ .+ -.-+-.+.|. .|-..++.+.++
T Consensus 562 ---------g~~l~~-----------~~-------~~el~~~~----~~-------~~vfAr~~Pe--~K~~iV~~lq~~ 601 (867)
T TIGR01524 562 ---------GADIEE-----------LS-------DEELAREL----RK-------YHIFARLTPM--QKSRIIGLLKKA 601 (867)
T ss_pred ---------cHhhhh-----------CC-------HHHHHHHh----hh-------CeEEEECCHH--HHHHHHHHHHhC
Confidence 000000 00 01222221 11 1123445554 488888887543
Q ss_pred hhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEc--CChhHHHHHHH
Q 003024 769 MAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYL--DDAAEVVTMLE 837 (856)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~~~~eV~~~L~ 837 (856)
| .-|.++||+.||.++++.|+. ++++|+. +..|+.++ ++...+...++
T Consensus 602 ----G---~vVam~GDGvNDapALk~AdV--------------GIAmg~gtdvAk~aADiVLldd~~~~I~~ai~ 655 (867)
T TIGR01524 602 ----G---HTVGFLGDGINDAPALRKADV--------------GISVDTAADIAKEASDIILLEKSLMVLEEGVI 655 (867)
T ss_pred ----C---CEEEEECCCcccHHHHHhCCE--------------EEEeCCccHHHHHhCCEEEecCChHHHHHHHH
Confidence 3 469999999999999999984 6788753 56777776 34455544443
No 252
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=94.48 E-value=1.4 Score=49.18 Aligned_cols=276 Identities=14% Similarity=0.160 Sum_probs=142.1
Q ss_pred HhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccc--chHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHh
Q 003024 177 SLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHL--MVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKAL 254 (856)
Q Consensus 177 ~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl--~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l 254 (856)
..|..|++.=+.+ .+ -+| |++..=|+-= ..+...||+..|++||..+.- | .+|.=-|.|-..+..
T Consensus 69 ~llk~~~~~~~~i----~~-~kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---P--sVWAWr~~Ra~~i~~- 135 (381)
T COG0763 69 RLLKIRRELVRYI----LA-NKP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---P--SVWAWRPKRAVKIAK- 135 (381)
T ss_pred HHHHHHHHHHHHH----Hh-cCC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---c--ceeeechhhHHHHHH-
Confidence 4566655443333 22 255 7777767652 356789999999999987764 3 444322666333333
Q ss_pred HhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc-
Q 003024 255 LNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF- 333 (856)
Q Consensus 255 l~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~- 333 (856)
.+|++.--.+ +-..|.+. .|+. ..|-|+.. .|.-.+. + .....|+++
T Consensus 136 -~~D~lLailP-FE~~~y~k----~g~~---------~~yVGHpl--------~d~i~~~-----~----~r~~ar~~l~ 183 (381)
T COG0763 136 -YVDHLLAILP-FEPAFYDK----FGLP---------CTYVGHPL--------ADEIPLL-----P----DREAAREKLG 183 (381)
T ss_pred -HhhHeeeecC-CCHHHHHh----cCCC---------eEEeCChh--------hhhcccc-----c----cHHHHHHHhC
Confidence 2454431111 11122210 0111 22333321 1111111 1 112244444
Q ss_pred ---CCCeEEEecc--CccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 003024 334 ---EGKTVLLGVD--DMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGR 408 (856)
Q Consensus 334 ---~~k~iil~Vd--Rld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~ 408 (856)
..+.+.+-.| |=+...-.+-.++|++++.+++|+.+ ++.-..+ ..++.++.+ ..+.-.
T Consensus 184 ~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~---~~~~~~----- 246 (381)
T COG0763 184 IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEE---ALKWEV----- 246 (381)
T ss_pred CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHH---Hhhccc-----
Confidence 3444444433 34455667778899999999999987 4433322 233333332 211111
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEec---------
Q 003024 409 PGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVS--------- 479 (856)
Q Consensus 409 ~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~S--------- 479 (856)
..+.+++. ..+....+.+||+.+..| |.+.+|++.|+. |.|++
T Consensus 247 --~~~~~~~~----~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~-----------------P~Vv~Yk~~~it~~ 298 (381)
T COG0763 247 --AGLSLILI----DGEKRKAFAAADAALAAS-----GTATLEAALAGT-----------------PMVVAYKVKPITYF 298 (381)
T ss_pred --cCceEEec----CchHHHHHHHhhHHHHhc-----cHHHHHHHHhCC-----------------CEEEEEeccHHHHH
Confidence 01222222 356788899999999998 799999999954 44433
Q ss_pred --------CCcccccccCCceee-----CCCCHHHHHHHHHHHHcCCH--HHHHHHHHHHhhhhhcCCHHHHHHHHHH
Q 003024 480 --------EFIGCSPSLSGAIRV-----NPWNIEATAEAMHEAIQMNE--AEKQLRHEKHYRYVSTHDVAYWARSFFQ 542 (856)
Q Consensus 480 --------e~~G~~~~l~~al~V-----nP~d~~~~A~ai~~aL~m~~--~er~~r~~~~~~~v~~~~~~~W~~~~l~ 542 (856)
.+.+....+.|-.+| .-..++.+|+++...+..+. ++..+..+.+++++.+..+..-+.+.+-
T Consensus 299 iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~vl 376 (381)
T COG0763 299 IAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQAVL 376 (381)
T ss_pred HHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 233333333332222 12347899999999997552 2223334445555555534444444433
No 253
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=94.46 E-value=0.064 Score=53.39 Aligned_cols=50 Identities=22% Similarity=0.411 Sum_probs=37.6
Q ss_pred cccccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhh
Q 003024 572 PNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCND 626 (856)
Q Consensus 572 ~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d 626 (856)
++|..++.+.- ..++..+|.++||.|.||+.. ....++++..+.++++ ++
T Consensus 24 ~si~~I~~~~~--~Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l-~~ 73 (168)
T PF09419_consen 24 PSIRDIDFEAN--HLKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNEL-KK 73 (168)
T ss_pred CChhhCCcchh--hhhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHH-HH
Confidence 45556665521 146678999999999999963 5678899999999996 53
No 254
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=94.42 E-value=0.14 Score=65.68 Aligned_cols=148 Identities=18% Similarity=0.220 Sum_probs=88.0
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEeeCCEEEEeCCCcceEecCCCCcccHHHHHHHH
Q 003024 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAEHGYFMRWSADEEWQNCGQSVDFGWIQIAEPV 688 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliaenG~~I~~~~~~~w~~~~~~~~~~w~~~v~~i 688 (856)
...+-+++.++++++ ++.|++|+++||........+.. .+|+...+... . ....
T Consensus 644 ~Dp~r~~v~~aI~~l-~~aGIkv~MiTGD~~~tA~~iA~---~~Gi~~~~~~~--~-~~~~------------------- 697 (1053)
T TIGR01523 644 YDPPRNESAGAVEKC-HQAGINVHMLTGDFPETAKAIAQ---EVGIIPPNFIH--D-RDEI------------------- 697 (1053)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHH---HcCCCCccccc--c-cccc-------------------
Confidence 456779999999995 99999999999999999999984 45554332110 0 0000
Q ss_pred HHHHhhcCCcceEEecccceEEeeecCCCCCCchhHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 003024 689 MKLYTESTDGSYIEIKESALVWHHRDADPGFGSSQAKELLDHLESVLANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTT 768 (856)
Q Consensus 689 ~~~~~~~~~Gs~ie~k~~~l~~~~~~~dp~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~ 768 (856)
.. .....|..++ ....+++.+ .... . .-+-.+.|. .|...++.+.+.
T Consensus 698 ~~--~~vitG~~l~------------------~l~~~~l~~----~~~~--~-----~V~ar~sP~--~K~~iV~~lq~~ 744 (1053)
T TIGR01523 698 MD--SMVMTGSQFD------------------ALSDEEVDD----LKAL--C-----LVIARCAPQ--TKVKMIEALHRR 744 (1053)
T ss_pred cc--ceeeehHHhh------------------hcCHHHHHH----Hhhc--C-----eEEEecCHH--HHHHHHHHHHhc
Confidence 00 0000010000 000112221 1111 1 123334453 488888887653
Q ss_pred hhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCC-C----ccccceEcC--ChhHHHHHH
Q 003024 769 MAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQ-K----PSKAKYYLD--DAAEVVTML 836 (856)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~----~s~A~y~l~--~~~eV~~~L 836 (856)
| .-|.++||+.||.+|++.|+. +|++|. . +..|++++. +...+.+++
T Consensus 745 ----g---~~Vam~GDGvNDapaLk~AdV--------------GIAmg~~gt~vak~aADivl~dd~f~~I~~~i 798 (1053)
T TIGR01523 745 ----K---AFCAMTGDGVNDSPSLKMANV--------------GIAMGINGSDVAKDASDIVLSDDNFASILNAI 798 (1053)
T ss_pred ----C---CeeEEeCCCcchHHHHHhCCc--------------cEecCCCccHHHHHhcCEEEecCCHHHHHHHH
Confidence 2 468999999999999999984 677873 2 467888874 455555554
No 255
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=94.29 E-value=0.083 Score=54.20 Aligned_cols=53 Identities=11% Similarity=0.165 Sum_probs=39.4
Q ss_pred CcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccce-EcCChhHHHHHHHHHHH
Q 003024 775 HADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKY-YLDDAAEVVTMLEALAE 841 (856)
Q Consensus 775 ~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y-~l~~~~eV~~~L~~L~~ 841 (856)
.++++++|||+.||++|.++++.. |.++.. ...+.+ .+++..++.+.|.....
T Consensus 143 ~~~~~v~iGDs~~D~~~~~aa~~~--------------v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 143 LGYRVIAAGDSYNDTTMLGEADAG--------------ILFRPPANVIAEFPQFPAVHTYDELLAAIDKASA 200 (205)
T ss_pred hCCeEEEEeCCHHHHHHHHhCCCC--------------EEECCCHHHHHhCCcccccCCHHHHHHHHHHHHh
Confidence 457899999999999999999852 444443 123454 67899998888877654
No 256
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=94.17 E-value=0.036 Score=54.88 Aligned_cols=44 Identities=23% Similarity=0.368 Sum_probs=31.2
Q ss_pred EEEEEecCCCCCCCCCCCC--------C-CCHHHHHHHHHHHhhCCCeEEEecC
Q 003024 592 RAILFDYDGTVMPQTSINK--------A-PSQAVISIINTLCNDARNTVFVVSG 636 (856)
Q Consensus 592 rlI~~DlDGTLl~~~~~~~--------~-~s~~~~~aL~~L~~d~g~~V~I~TG 636 (856)
|+.+||+||||+...+... . ..+.+.++|++| .+.|..++|+|-
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l-~~~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALREL-HKKGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHH-HHTTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHH-HhcCCeEEEEeC
Confidence 6899999999997433111 1 245799999998 778999998884
No 257
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=94.16 E-value=0.051 Score=55.65 Aligned_cols=42 Identities=17% Similarity=0.242 Sum_probs=37.6
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 754 QGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 754 ~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
.+-.|...++.++++. +++++.++++|||.+|++|++.+|..
T Consensus 152 ~g~~K~~~l~~~~~~~---~~~~~~~~~~gDs~~D~~~~~~a~~~ 193 (202)
T TIGR01490 152 KGEGKVHALAELLAEE---QIDLKDSYAYGDSISDLPLLSLVGHP 193 (202)
T ss_pred CChHHHHHHHHHHHHc---CCCHHHcEeeeCCcccHHHHHhCCCc
Confidence 4567888899999888 89999999999999999999999964
No 258
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=94.15 E-value=0.081 Score=54.64 Aligned_cols=64 Identities=9% Similarity=0.004 Sum_probs=44.7
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCCcc---ccce--EcCCh
Q 003024 755 GVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQKPS---KAKY--YLDDA 829 (856)
Q Consensus 755 gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s---~A~y--~l~~~ 829 (856)
+-.|...++.+ +.. + .+++++||+.||++|++.++. +|++..++. .|+- .+.+.
T Consensus 130 ~~~K~~~l~~l-~~~---~---~~~v~vGDs~nDl~ml~~Ag~--------------~ia~~ak~~~~~~~~~~~~~~~~ 188 (203)
T TIGR02137 130 KDPKRQSVIAF-KSL---Y---YRVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAVHTY 188 (203)
T ss_pred cchHHHHHHHH-Hhh---C---CCEEEEeCCHHHHHHHHhCCC--------------CEEecCCHHHHHhCCCCCcccCH
Confidence 44688888887 343 4 379999999999999999986 477766642 2222 23566
Q ss_pred hHHHHHHHHH
Q 003024 830 AEVVTMLEAL 839 (856)
Q Consensus 830 ~eV~~~L~~L 839 (856)
++++..+..-
T Consensus 189 ~~~~~~~~~~ 198 (203)
T TIGR02137 189 EDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHH
Confidence 7776666554
No 259
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=94.04 E-value=0.25 Score=58.32 Aligned_cols=59 Identities=12% Similarity=0.087 Sum_probs=40.5
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC
Q 003024 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~ 649 (856)
..+.+++=+|++++..-.....+-+.+.++++.| ++.|+.++++||............+
T Consensus 326 g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l-~~~gi~~~~ltGD~~~~a~~ia~~l 384 (499)
T TIGR01494 326 GLRVLAVASKETLLGLLGLEDPLRDDAKETISEL-REAGIRVIMLTGDNVLTAKAIAKEL 384 (499)
T ss_pred CCEEEEEEECCeEEEEEEecCCCchhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 3444444455555531113445667888888886 6689999999999999988887543
No 260
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=94.02 E-value=4.1 Score=46.11 Aligned_cols=250 Identities=20% Similarity=0.253 Sum_probs=130.2
Q ss_pred HcCCCCCEEEEeCccc--chHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHH
Q 003024 196 VINPEDDYVWIHDYHL--MVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLS 273 (856)
Q Consensus 196 ~~~~~~D~VwihDyhl--~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~ 273 (856)
..+| |+|..=||-= +-+...+|++.+..|+.++.= |.+|.==++|-..++.. +|.+- -.+.+-..|.+
T Consensus 80 ~~~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI~-----PqvWAWr~~R~~~i~~~--~D~ll-~ifPFE~~~y~ 149 (373)
T PF02684_consen 80 EEKP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS-----PQVWAWRPGRAKKIKKY--VDHLL-VIFPFEPEFYK 149 (373)
T ss_pred HcCC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC-----CceeeeCccHHHHHHHH--Hhhee-ECCcccHHHHh
Confidence 3466 7888878873 456789999988887876653 45554447776666553 23321 11222223332
Q ss_pred HHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHc--CCCeE--EEeccCccccC
Q 003024 274 CCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQF--EGKTV--LLGVDDMDIFK 349 (856)
Q Consensus 274 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~k~i--il~VdRld~~K 349 (856)
+.| +-..|-|+.. +|. ....+.. ...++.+ +++++ +|-=+|-...|
T Consensus 150 ------------~~g-~~~~~VGHPl--------~d~-----~~~~~~~----~~~~~~~l~~~~~iIaLLPGSR~~EI~ 199 (373)
T PF02684_consen 150 ------------KHG-VPVTYVGHPL--------LDE-----VKPEPDR----AEAREKLLDPDKPIIALLPGSRKSEIK 199 (373)
T ss_pred ------------ccC-CCeEEECCcc--------hhh-----hccCCCH----HHHHHhcCCCCCcEEEEeCCCCHHHHH
Confidence 111 1233333321 121 1111111 1112222 34432 33445666555
Q ss_pred C-HHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHH
Q 003024 350 G-VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAA 428 (856)
Q Consensus 350 G-i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~a 428 (856)
- ++..++|.+++.+++|+++ ++....+. ...+.+++.....+.. .+++.+. .+...
T Consensus 200 rllP~~l~aa~~l~~~~p~l~----fvvp~a~~--------~~~~~i~~~~~~~~~~------~~~~~~~-----~~~~~ 256 (373)
T PF02684_consen 200 RLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE--------VHEELIEEILAEYPPD------VSIVIIE-----GESYD 256 (373)
T ss_pred HHHHHHHHHHHHHHHhCCCeE----EEEecCCH--------HHHHHHHHHHHhhCCC------CeEEEcC-----CchHH
Confidence 4 4788899999999999876 55444321 1122233333222211 1233222 35777
Q ss_pred HHHhcceeeeccccccCCCcccceeeeecCCCCCCCC--CCCCCCCCceEEecCCcccccccCCc-----eeeCCCCHHH
Q 003024 429 YYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESS--SESSAPKKSMLVVSEFIGCSPSLSGA-----IRVNPWNIEA 501 (856)
Q Consensus 429 ly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~--~~~~~~~~g~lV~Se~~G~~~~l~~a-----l~VnP~d~~~ 501 (856)
++++||+.+++| |.+.+|++..+... .--+ ..+.--=.-.+|-..+.|....+-|- ++-+-.+++.
T Consensus 257 ~m~~ad~al~~S-----GTaTLE~Al~g~P~--Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~ 329 (373)
T PF02684_consen 257 AMAAADAALAAS-----GTATLEAALLGVPM--VVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPEN 329 (373)
T ss_pred HHHhCcchhhcC-----CHHHHHHHHhCCCE--EEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHH
Confidence 899999999999 78999998885410 0000 00000000012224566666655331 4455678999
Q ss_pred HHHHHHHHHcCCHH
Q 003024 502 TAEAMHEAIQMNEA 515 (856)
Q Consensus 502 ~A~ai~~aL~m~~~ 515 (856)
+++++...|..++.
T Consensus 330 i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 330 IAAELLELLENPEK 343 (373)
T ss_pred HHHHHHHHhcCHHH
Confidence 99999999985543
No 261
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.01 E-value=0.054 Score=58.17 Aligned_cols=54 Identities=26% Similarity=0.375 Sum_probs=39.9
Q ss_pred CCcEEEEEecCCCCCCCCC-------C----------------CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHH
Q 003024 589 SKSRAILFDYDGTVMPQTS-------I----------------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLG 643 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~-------~----------------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~ 643 (856)
.+..+|++|+|+|+++..+ . ...+-+.+.+.|+.| ...|..++++|+|+.....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L-~~~G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYA-NSKGVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHH-HHCCCeEEEEeCCCcchHH
Confidence 4567999999999996321 0 112347778889997 7789999999999855443
No 262
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=93.96 E-value=0.011 Score=57.95 Aligned_cols=99 Identities=18% Similarity=0.275 Sum_probs=47.2
Q ss_pred HHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCch-----HHHHHH-hHhCCEEcccC
Q 003024 191 QRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVR-----EEILKA-LLNADLIGFHT 264 (856)
Q Consensus 191 ~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r-----~eil~~-ll~~dligf~t 264 (856)
.++++..+| |+|++|.++...+...... +.++.+++|.+++.........+. ..+.+. .-.+|.+-.-+
T Consensus 73 ~~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS 147 (177)
T PF13439_consen 73 RRLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVS 147 (177)
T ss_dssp HHHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESS
T ss_pred HHHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEEC
Confidence 334455566 8999999887765544333 899999999888531111111111 111111 23467665555
Q ss_pred HHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHH
Q 003024 265 FDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIE 314 (856)
Q Consensus 265 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~ 314 (856)
..-.+.+.+ .|+ ...++.++|+|||.++|+
T Consensus 148 ~~~~~~l~~-----~~~---------------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 148 ESTKDELIK-----FGI---------------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHHHHH-----hCC---------------cccCCEEEECCccHHHcC
Confidence 433333332 122 124678899999998874
No 263
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=93.68 E-value=0.36 Score=61.06 Aligned_cols=41 Identities=22% Similarity=0.366 Sum_probs=35.1
Q ss_pred CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC
Q 003024 608 INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (856)
Q Consensus 608 ~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~ 649 (856)
...+|-+++.++++.| ++.|++++++||-.......+..++
T Consensus 544 ~~Dppr~~v~~aI~~l-~~AGI~v~MiTGD~~~TA~aIa~~~ 584 (917)
T COG0474 544 IEDPPREDVKEAIEEL-REAGIKVWMITGDHVETAIAIAKEC 584 (917)
T ss_pred ccCCCCccHHHHHHHH-HHCCCcEEEECCCCHHHHHHHHHHc
Confidence 4456778999999994 8999999999999999999988544
No 264
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=93.58 E-value=0.11 Score=52.13 Aligned_cols=56 Identities=25% Similarity=0.287 Sum_probs=43.6
Q ss_pred cEEEEEecCCCCCCCCCC-----------------------CCCCCHHHHHHHHHHHhhCCCeEEEecCC-ChhhHHHhh
Q 003024 591 SRAILFDYDGTVMPQTSI-----------------------NKAPSQAVISIINTLCNDARNTVFVVSGR-GRDCLGKWF 646 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~-----------------------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR-~~~~l~~~~ 646 (856)
.|+++||+|+||.++... .-.+-+.+.++|+.| +++|..++|+|+. ....+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~L-k~~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTL-KDAGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHH-HHCCCEEEEEeCCCChHHHHHHH
Confidence 689999999999974320 012348889999998 7789999999998 777777766
Q ss_pred c
Q 003024 647 S 647 (856)
Q Consensus 647 ~ 647 (856)
.
T Consensus 81 ~ 81 (174)
T TIGR01685 81 G 81 (174)
T ss_pred H
Confidence 3
No 265
>PLN03190 aminophospholipid translocase; Provisional
Probab=93.55 E-value=0.34 Score=62.67 Aligned_cols=39 Identities=21% Similarity=0.175 Sum_probs=33.6
Q ss_pred CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003024 609 NKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 609 ~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
..++-+.+.+++++| ++.|+.|+++||-.......+...
T Consensus 724 ~D~lr~~v~~~I~~l-~~agi~v~mlTGD~~~tAi~IA~s 762 (1178)
T PLN03190 724 EDKLQQGVPEAIESL-RTAGIKVWVLTGDKQETAISIGYS 762 (1178)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHH
Confidence 456788999999996 888999999999999988888744
No 266
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=93.48 E-value=0.11 Score=55.39 Aligned_cols=50 Identities=22% Similarity=0.312 Sum_probs=38.4
Q ss_pred cEEEEEecCCCCCCCCC-----------------C-------CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhh
Q 003024 591 SRAILFDYDGTVMPQTS-----------------I-------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDC 641 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~-----------------~-------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~ 641 (856)
.-++++|+|+|+++..+ . ...+-+.+++.++.+ .+.|..|+++|||+-..
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l-~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKL-VSLGFKIIFLSGRLKDK 174 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHH-HHCCCEEEEEeCCchhH
Confidence 46999999999994110 1 223457888899996 88899999999998654
No 267
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=93.38 E-value=1.1 Score=51.41 Aligned_cols=138 Identities=17% Similarity=0.149 Sum_probs=80.0
Q ss_pred CeEEEeccC-ccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhc---------c
Q 003024 336 KTVLLGVDD-MDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINE---------T 405 (856)
Q Consensus 336 k~iil~VdR-ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~---------~ 405 (856)
..+++.-.| -...++++..++|++++.++ |+ +.++....+. .+++.+++.+.+. .++. .
T Consensus 207 ~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 207 RIALLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSL 275 (396)
T ss_pred EEEEECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchh
Confidence 345677777 45567788999999998655 54 3355444332 2334444433221 0000 0
Q ss_pred cCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccc-
Q 003024 406 FGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC- 484 (856)
Q Consensus 406 ~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~- 484 (856)
|. ...+.++. ...+..++|++||++|..| |-+..|+++++. |.|+--+.+-
T Consensus 276 ~~---~~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~-----------------P~Ilip~~~~q 327 (396)
T TIGR03492 276 FQ---KGTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGK-----------------PVIQLPGKGPQ 327 (396)
T ss_pred hc---cCceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCC-----------------CEEEEeCCCCH
Confidence 00 00122221 2457899999999999886 355599999865 4444432111
Q ss_pred -----ccc---c-CCceeeCCCCHHHHHHHHHHHHcC
Q 003024 485 -----SPS---L-SGAIRVNPWNIEATAEAMHEAIQM 512 (856)
Q Consensus 485 -----~~~---l-~~al~VnP~d~~~~A~ai~~aL~m 512 (856)
.+. | .+++.+...+.+.++++|.+.|+.
T Consensus 328 ~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d 364 (396)
T TIGR03492 328 FTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLAD 364 (396)
T ss_pred HHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcC
Confidence 011 1 345555567889999999999874
No 268
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=93.07 E-value=0.14 Score=50.22 Aligned_cols=55 Identities=13% Similarity=0.259 Sum_probs=40.0
Q ss_pred EEEEecCCCCCCCCC--------CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChh---hHHHhhcC
Q 003024 593 AILFDYDGTVMPQTS--------INKAPSQAVISIINTLCNDARNTVFVVSGRGRD---CLGKWFSP 648 (856)
Q Consensus 593 lI~~DlDGTLl~~~~--------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~---~l~~~~~~ 648 (856)
++++|+|||++.... ......+.+.+..+++ +++|..++-+|+|+.. ..+.|+..
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i-~~~GY~ilYlTaRp~~qa~~Tr~~L~~ 66 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKI-ADNGYKILYLTARPIGQANRTRSWLAQ 66 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHH-HHCCeEEEEECcCcHHHHHHHHHHHHH
Confidence 479999999998310 0113457778888886 8899999999999965 45555543
No 269
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=93.03 E-value=0.64 Score=54.69 Aligned_cols=37 Identities=24% Similarity=0.296 Sum_probs=30.4
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
.-|+..++.+-++- + ..|.||||+.||..|.+.|+..
T Consensus 767 tQKA~v~~llq~~t---~---krvc~IGDGGNDVsMIq~A~~G 803 (1051)
T KOG0210|consen 767 TQKAQVVRLLQKKT---G---KRVCAIGDGGNDVSMIQAADVG 803 (1051)
T ss_pred hHHHHHHHHHHHhh---C---ceEEEEcCCCccchheeecccc
Confidence 34888888777664 3 6799999999999999999753
No 270
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=92.66 E-value=5.6 Score=44.95 Aligned_cols=73 Identities=11% Similarity=-0.041 Sum_probs=50.0
Q ss_pred EEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC-C-c
Q 003024 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G-A 491 (856)
Q Consensus 414 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-a 491 (856)
.+.+.++++..++.++++.|+++|-.|- |.. .||.+.+. |+|.- ..=.+.+. | .
T Consensus 263 ~v~l~~~l~~~~~l~Ll~~a~~vitdSS----ggi-~EA~~lg~-----------------Pvv~l--~~R~e~~~~g~n 318 (365)
T TIGR03568 263 NFRLFKSLGQERYLSLLKNADAVIGNSS----SGI-IEAPSFGV-----------------PTINI--GTRQKGRLRADS 318 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCEEEEcCh----hHH-HhhhhcCC-----------------CEEee--cCCchhhhhcCe
Confidence 4567779999999999999999885442 122 79999855 44421 22223332 2 2
Q ss_pred -eeeCCCCHHHHHHHHHHHHc
Q 003024 492 -IRVNPWNIEATAEAMHEAIQ 511 (856)
Q Consensus 492 -l~VnP~d~~~~A~ai~~aL~ 511 (856)
+.| +.|.+++.+++.+++.
T Consensus 319 vl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 319 VIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred EEEe-CCCHHHHHHHHHHHhC
Confidence 447 7799999999999654
No 271
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=92.18 E-value=0.02 Score=60.21 Aligned_cols=57 Identities=21% Similarity=0.280 Sum_probs=41.2
Q ss_pred CCcEEEEEecCCCCCCCCC-----------------------CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHh
Q 003024 589 SKSRAILFDYDGTVMPQTS-----------------------INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKW 645 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~-----------------------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~ 645 (856)
.+...|+||+|+|+++... ....+-+.+++.++.+ .+.|..|+++|||+...-...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~-~~~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYA-RSRGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHH-HHTTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHH-HHCCCeEEEEecCCchhHHHH
Confidence 4678999999999986110 0112335678888885 888999999999998744444
Q ss_pred h
Q 003024 646 F 646 (856)
Q Consensus 646 ~ 646 (856)
.
T Consensus 149 ~ 149 (229)
T PF03767_consen 149 E 149 (229)
T ss_dssp H
T ss_pred H
Confidence 3
No 272
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=92.17 E-value=0.52 Score=47.76 Aligned_cols=60 Identities=17% Similarity=0.302 Sum_probs=45.3
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCcc
Q 003024 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLG 653 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lg 653 (856)
...+-+++|+-|||-. .+. ..+...++|+.| ++.+.+|=++|.-+.++-..+.+++.++|
T Consensus 5 ~~v~gvLlDlSGtLh~---e~~-avpga~eAl~rL-r~~~~kVkFvTNttk~Sk~~l~~rL~rlg 64 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHI---EDA-AVPGAVEALKRL-RDQHVKVKFVTNTTKESKRNLHERLQRLG 64 (262)
T ss_pred cccceEEEeccceEec---ccc-cCCCHHHHHHHH-HhcCceEEEEecCcchhHHHHHHHHHHhC
Confidence 3578899999999997 444 567788999998 87899999998877776555554444444
No 273
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=92.17 E-value=13 Score=41.70 Aligned_cols=259 Identities=16% Similarity=0.060 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhH--hCCE
Q 003024 182 YVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALL--NADL 259 (856)
Q Consensus 182 Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~dl 259 (856)
.-.+=..|++.+ +..+| |+|.||.=-...+..-+-....++||+.. |-=-=+.|. .-|.-+|+.|-+. -||+
T Consensus 52 ~~~~~~~~~~~~-~~~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~--~~g~~de~~R~~i~~la~l 125 (346)
T PF02350_consen 52 TGLAIIELADVL-EREKP--DAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDR--TEGMPDEINRHAIDKLAHL 125 (346)
T ss_dssp HHHHHHHHHHHH-HHHT---SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-T--TSSTTHHHHHHHHHHH-SE
T ss_pred HHHHHHHHHHHH-HhcCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCcccc--CCCCchhhhhhhhhhhhhh
Confidence 333444444444 44478 89999988877777666666667775532 110000011 1234444444322 2566
Q ss_pred EcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHHHHhcCchHHHHHHHHHHHcCCCeEE
Q 003024 260 IGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRLADKDWRVQELKQQFEGKTVL 339 (856)
Q Consensus 260 igf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~k~ii 339 (856)
----|..+.++.++ .|.+. ++ +. .+-.+++|.-........+... ...+.....++.++
T Consensus 126 hf~~t~~~~~~L~~-----~G~~~--~r----I~--------~vG~~~~D~l~~~~~~~~~~~~--~~~i~~~~~~~~iL 184 (346)
T PF02350_consen 126 HFAPTEEARERLLQ-----EGEPP--ER----IF--------VVGNPGIDALLQNKEEIEEKYK--NSGILQDAPKPYIL 184 (346)
T ss_dssp EEESSHHHHHHHHH-----TT--G--GG----EE--------E---HHHHHHHHHHHTTCC-HH--HHHHHHCTTSEEEE
T ss_pred hccCCHHHHHHHHh-----cCCCC--Ce----EE--------EEChHHHHHHHHhHHHHhhhhh--hHHHHhccCCCEEE
Confidence 65567777777765 34421 11 11 1224567654332211111110 12222223445556
Q ss_pred EeccCcccc---CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEE
Q 003024 340 LGVDDMDIF---KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVF 416 (856)
Q Consensus 340 l~VdRld~~---KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~ 416 (856)
+..=|.... ......+.+++.+.+. +++. +|....++ ....+.+.+...++ ..+.
T Consensus 185 vt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~-------p~~~~~i~~~l~~~---------~~v~- 242 (346)
T PF02350_consen 185 VTLHPVTNEDNPERLEQILEALKALAER-QNVP----VIFPLHNN-------PRGSDIIIEKLKKY---------DNVR- 242 (346)
T ss_dssp EE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEE----EEEE--S--------HHHHHHHHHHHTT----------TTEE-
T ss_pred EEeCcchhcCChHHHHHHHHHHHHHHhc-CCCc----EEEEecCC-------chHHHHHHHHhccc---------CCEE-
Confidence 666554443 3466777888888777 4433 44444322 12223332222221 1244
Q ss_pred EcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc---CCcee
Q 003024 417 IDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL---SGAIR 493 (856)
Q Consensus 417 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~al~ 493 (856)
+..+++..++.++++.|+++|-.|- | +..||..++. |+|.=...|-.++. ..+++
T Consensus 243 ~~~~l~~~~~l~ll~~a~~vvgdSs--G---I~eEa~~lg~-----------------P~v~iR~~geRqe~r~~~~nvl 300 (346)
T PF02350_consen 243 LIEPLGYEEYLSLLKNADLVVGDSS--G---IQEEAPSLGK-----------------PVVNIRDSGERQEGRERGSNVL 300 (346)
T ss_dssp EE----HHHHHHHHHHESEEEESSH--H---HHHHGGGGT-------------------EEECSSS-S-HHHHHTTSEEE
T ss_pred EECCCCHHHHHHHHhcceEEEEcCc--c---HHHHHHHhCC-----------------eEEEecCCCCCHHHHhhcceEE
Confidence 4457899999999999999887763 2 2339999855 66665666655555 34566
Q ss_pred eCCCCHHHHHHHHHHHHcC
Q 003024 494 VNPWNIEATAEAMHEAIQM 512 (856)
Q Consensus 494 VnP~d~~~~A~ai~~aL~m 512 (856)
|. .|.+++.+||.+++..
T Consensus 301 v~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 301 VG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp ET-SSHHHHHHHHHHHHH-
T ss_pred eC-CCHHHHHHHHHHHHhC
Confidence 65 8999999999999974
No 274
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=92.05 E-value=1.2 Score=51.64 Aligned_cols=131 Identities=18% Similarity=0.220 Sum_probs=71.2
Q ss_pred ecccCchHHHHHhcCchHHHH--HHHHHHHc---CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEec
Q 003024 305 PVGIHMGQIESVLRLADKDWR--VQELKQQF---EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIAN 379 (856)
Q Consensus 305 p~GId~~~~~~~~~~~~~~~~--~~~l~~~~---~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~ 379 (856)
.+|.-..+....+...+.... +..-|++| ++..++.+..++ .|=-+..+..+.++|++-|+-+ |+....
T Consensus 249 ~~~~~~~~~~~~~~~g~~~~~~~v~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~ 322 (468)
T PF13844_consen 249 QNGLATTQTNNKAATGEEVPQNIVVTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRF 322 (468)
T ss_dssp EECCGHHHH-HHHHTTSS--SSEEEEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEET
T ss_pred ecccchhhhhccccCCccCCccccccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeC
Confidence 567776666554432221110 11124455 456666666665 4667889999999999999754 666654
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeee
Q 003024 380 PARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (856)
Q Consensus 380 p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 456 (856)
+.. + ++.+.+.+.+ .|- .-.-++ |.+..+.+|..+.|+.+|||+-|..+-| +.+.+||++++
T Consensus 323 ~~~--~------~~~l~~~~~~----~Gv-~~~Ri~-f~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwmG 384 (468)
T PF13844_consen 323 PAS--G------EARLRRRFAA----HGV-DPDRII-FSPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWMG 384 (468)
T ss_dssp STT--H------HHHHHHHHHH----TTS--GGGEE-EEE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT
T ss_pred CHH--H------HHHHHHHHHH----cCC-ChhhEE-EcCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHcC
Confidence 431 1 1233333333 221 223354 4556788999999999999999987766 47889999984
No 275
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=91.79 E-value=2.2 Score=45.62 Aligned_cols=56 Identities=14% Similarity=0.208 Sum_probs=40.7
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC
Q 003024 753 PQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK 818 (856)
Q Consensus 753 p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 818 (856)
-.|.+||.++..++.++ |..|+.|++|-|+...+.-.+.+=.. .+-.++++.....
T Consensus 158 t~~~~KG~~L~~fL~~~---~~~pk~IIfIDD~~~nl~sv~~a~k~-------~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 158 TGGQDKGEVLKYFLDKI---NQSPKKIIFIDDNKENLKSVEKACKK-------SGIDFIGFHYTGA 213 (252)
T ss_pred eCCCccHHHHHHHHHHc---CCCCCeEEEEeCCHHHHHHHHHHHhh-------CCCcEEEEEEcch
Confidence 36788999999999999 99999999999997665544443221 1224567777654
No 276
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=91.36 E-value=0.24 Score=58.28 Aligned_cols=50 Identities=16% Similarity=0.268 Sum_probs=38.7
Q ss_pred CCcEEEEEecCCCCCCCCCCC---------CCCCHHHHHHHHHHHhhCCCeEEEecCCCh
Q 003024 589 SKSRAILFDYDGTVMPQTSIN---------KAPSQAVISIINTLCNDARNTVFVVSGRGR 639 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~---------~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~ 639 (856)
...|+++||+||||+...+.. .-+.+.+.++|++| .+.|+.++|+|..+.
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L-~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKEL-EADGFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHH-HHCCCEEEEEECCcc
Confidence 457999999999999733210 12457888999998 788999999998665
No 277
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=90.56 E-value=0.42 Score=46.61 Aligned_cols=56 Identities=14% Similarity=0.165 Sum_probs=41.9
Q ss_pred cEEEEEecCCCCCCCCC-C-----CC-----------------CCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhc
Q 003024 591 SRAILFDYDGTVMPQTS-I-----NK-----------------APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~-~-----~~-----------------~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 647 (856)
++++++|+||||+.... + .. .+-+.+.+.|+.| + .+..++|+|+.+...++..+.
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L-~-~~~~l~I~Ts~~~~~~~~il~ 79 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRA-S-ELFELVVFTAGLRMYADPVLD 79 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHH-H-hccEEEEEeCCcHHHHHHHHH
Confidence 57899999999998421 0 00 1236778889997 4 479999999999998888774
Q ss_pred C
Q 003024 648 P 648 (856)
Q Consensus 648 ~ 648 (856)
.
T Consensus 80 ~ 80 (148)
T smart00577 80 L 80 (148)
T ss_pred H
Confidence 3
No 278
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=89.90 E-value=21 Score=40.51 Aligned_cols=73 Identities=18% Similarity=0.150 Sum_probs=49.8
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccc----cccc--
Q 003024 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC----SPSL-- 488 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~----~~~l-- 488 (856)
+.+.+.+++.+ ++..||++| .+-|+ -+..|+++++. |+|+.-+.+- +..+
T Consensus 290 v~~~~~~p~~~---ll~~~d~~I---~hgG~-~t~~eal~~Gv-----------------P~v~~P~~~dQ~~~a~~~~~ 345 (401)
T cd03784 290 VRVVDFVPHDW---LLPRCAAVV---HHGGA-GTTAAALRAGV-----------------PQLVVPFFGDQPFWAARVAE 345 (401)
T ss_pred eEEeCCCCHHH---Hhhhhheee---ecCCc-hhHHHHHHcCC-----------------CEEeeCCCCCcHHHHHHHHH
Confidence 45566777654 577799998 45665 56789999965 6666655442 2222
Q ss_pred -CCceeeCCC--CHHHHHHHHHHHHc
Q 003024 489 -SGAIRVNPW--NIEATAEAMHEAIQ 511 (856)
Q Consensus 489 -~~al~VnP~--d~~~~A~ai~~aL~ 511 (856)
+-|+.+++. +.+++++++.++|+
T Consensus 346 ~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 346 LGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 225666554 68999999999997
No 279
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=88.41 E-value=0.5 Score=48.40 Aligned_cols=33 Identities=12% Similarity=0.206 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003024 614 QAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 614 ~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
+.+.+.|+.| ++. +.++|+|+.....+..++..
T Consensus 71 pg~~e~L~~L-~~~-~~~~IvS~~~~~~~~~~l~~ 103 (205)
T PRK13582 71 PGAVEFLDWL-RER-FQVVILSDTFYEFAGPLMRQ 103 (205)
T ss_pred CCHHHHHHHH-Hhc-CCEEEEeCCcHHHHHHHHHH
Confidence 3455778886 555 89999999999988888754
No 280
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=87.96 E-value=1.3 Score=50.29 Aligned_cols=74 Identities=15% Similarity=0.174 Sum_probs=56.8
Q ss_pred CHHHHHHHHHcCCcEEEEEecCCCCCCCCC-------------CCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHH
Q 003024 578 SIDAIVSAYLRSKSRAILFDYDGTVMPQTS-------------INKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGK 644 (856)
Q Consensus 578 ~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~-------------~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~ 644 (856)
.+..++.+-.....|.+++|+|+||..-.- ..+.+-.+..+.+..| .++|..++|||=-....+.+
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l-~kqGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGL-KKQGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHH-HhccEEEEEecCCchhhHHH
Confidence 456677777788899999999999986110 1122335666778887 78899999999999999999
Q ss_pred hhcCCCCc
Q 003024 645 WFSPCKKL 652 (856)
Q Consensus 645 ~~~~~~~l 652 (856)
.|..-|.+
T Consensus 288 vF~khp~M 295 (574)
T COG3882 288 VFRKHPDM 295 (574)
T ss_pred HHhhCCCe
Confidence 99776654
No 281
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=87.93 E-value=3.3 Score=41.38 Aligned_cols=84 Identities=21% Similarity=0.233 Sum_probs=43.6
Q ss_pred ccceEEeeecCCCCCCchhHHHHHHHHHHH-hcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEe
Q 003024 705 ESALVWHHRDADPGFGSSQAKELLDHLESV-LANEPAAVKSGQFIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIG 783 (856)
Q Consensus 705 ~~~l~~~~~~~dp~~~~~~a~el~~~L~~~-l~~~~~~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiG 783 (856)
+..+....+...|+ -|+++++.++=. ..........--.++||.|. +|-.=.+.|.+.. |+++++++.|=
T Consensus 61 gv~lavASRt~~P~----~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~g--sK~~Hf~~i~~~t---gI~y~eMlFFD 131 (169)
T PF12689_consen 61 GVKLAVASRTDEPD----WARELLKLLEIDDADGDGVPLIEYFDYLEIYPG--SKTTHFRRIHRKT---GIPYEEMLFFD 131 (169)
T ss_dssp T--EEEEE--S-HH----HHHHHHHHTT-C----------CCECEEEESSS---HHHHHHHHHHHH------GGGEEEEE
T ss_pred CCEEEEEECCCChH----HHHHHHHhcCCCccccccccchhhcchhheecC--chHHHHHHHHHhc---CCChhHEEEec
Confidence 34445545444443 356666665211 01112333333456999985 9999999999988 99999999999
Q ss_pred CCchhHHHHHHccc
Q 003024 784 DDRSDEDMFEIIGN 797 (856)
Q Consensus 784 D~~ND~~Mf~~ag~ 797 (856)
|.....+--+.+|.
T Consensus 132 De~~N~~~v~~lGV 145 (169)
T PF12689_consen 132 DESRNIEVVSKLGV 145 (169)
T ss_dssp S-HHHHHHHHTTT-
T ss_pred CchhcceeeEecCc
Confidence 97655455555664
No 282
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=87.90 E-value=1.3 Score=46.01 Aligned_cols=23 Identities=9% Similarity=0.195 Sum_probs=19.9
Q ss_pred cceEEEEeCCchhHHHHHHcccc
Q 003024 776 ADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 776 ~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
.+...+.|||.||.+||+.+++.
T Consensus 175 ~~~~~aYsDS~~D~pmL~~a~~~ 197 (210)
T TIGR01545 175 LKLYSGYSDSKQDNPLLAFCEHR 197 (210)
T ss_pred hhheEEecCCcccHHHHHhCCCc
Confidence 45568999999999999999973
No 283
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=87.29 E-value=1.9 Score=46.17 Aligned_cols=58 Identities=17% Similarity=0.245 Sum_probs=45.7
Q ss_pred CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003024 590 KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
...+|++|+|.||+.......-+.+.+.+.|.+| ++.|..+++=|--+.+.+..-+..
T Consensus 121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~L-k~~g~vLvLWSyG~~eHV~~sl~~ 178 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLREL-KEQGCVLVLWSYGNREHVRHSLKE 178 (297)
T ss_pred CCcEEEEECCCcccccCCccccCChHHHHHHHHH-HHcCCEEEEecCCCHHHHHHHHHH
Confidence 4679999999999983323334679999999998 888988888888888877777643
No 284
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=87.23 E-value=0.67 Score=46.70 Aligned_cols=38 Identities=16% Similarity=0.065 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
|.-.++.+++++ ++++...++|||..+|+..-..+|..
T Consensus 107 ~~gm~~~~~~~~---~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 107 KPGMLLSALKEY---NIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ChHHHHHHHHHh---CCCccceEEecCcHHHHHHHHHCCCC
Confidence 666677777777 89999999999999999999999874
No 285
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=87.04 E-value=59 Score=36.73 Aligned_cols=137 Identities=14% Similarity=0.105 Sum_probs=83.4
Q ss_pred CeEEEeccCcccc-CCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003024 336 KTVLLGVDDMDIF-KGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (856)
Q Consensus 336 k~iil~VdRld~~-KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pv 414 (856)
+-+++..-|-.-. +++...+.|+.++++++|+.. +|- -+-.| +-+++.. +.+++ -.+.
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----viy-p~H~~---~~v~e~~----------~~~L~---~~~~ 263 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VIY-PVHPR---PRVRELV----------LKRLK---NVER 263 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EEE-eCCCC---hhhhHHH----------HHHhC---CCCc
Confidence 4667777776655 999999999999999998754 332 22222 2222222 11222 1223
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC-C-ce
Q 003024 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS-G-AI 492 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-al 492 (856)
+.+..++...+...|...|-+.+--| |=.--||-.-+. -++++=+.+.=.+.+. | .+
T Consensus 264 v~li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~----------------Pvl~lR~~TERPE~v~agt~~ 322 (383)
T COG0381 264 VKLIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGK----------------PVLVLRDTTERPEGVEAGTNI 322 (383)
T ss_pred EEEeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCC----------------cEEeeccCCCCccceecCceE
Confidence 44555899999999999996655444 122344444322 2444444444445553 3 35
Q ss_pred eeCCCCHHHHHHHHHHHHcCCHH
Q 003024 493 RVNPWNIEATAEAMHEAIQMNEA 515 (856)
Q Consensus 493 ~VnP~d~~~~A~ai~~aL~m~~~ 515 (856)
+|+ .|.+.+.+++.+++++++.
T Consensus 323 lvg-~~~~~i~~~~~~ll~~~~~ 344 (383)
T COG0381 323 LVG-TDEENILDAATELLEDEEF 344 (383)
T ss_pred EeC-ccHHHHHHHHHHHhhChHH
Confidence 665 4789999999999986544
No 286
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=86.79 E-value=14 Score=41.62 Aligned_cols=146 Identities=16% Similarity=0.138 Sum_probs=82.7
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003024 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pv 414 (856)
+++.||-+|-=--.+.+...+. ..+..-++ ++.+++++.+. . +++++....++ +. +
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~---~~~~~l~~---~~~v~~~~G~~----~-~~~~~~~~~~~-----------~~--~ 237 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVP---EALAKLAN---RIQVIHQTGKN----D-LEELKSAYNEL-----------GV--V 237 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHH---HHHHHhhh---CeEEEEEcCcc----h-HHHHHHHHhhc-----------Cc--E
Confidence 6777777765443333444444 33333222 45577776332 2 33444333222 21 1
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccc--cccc----
Q 003024 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGC--SPSL---- 488 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~l---- 488 (856)
. +... .+++.++|++||++|.=|= +++..|..+++. |.|+=-+... .++.
T Consensus 238 ~-v~~f--~~dm~~~~~~ADLvIsRaG----a~Ti~E~~a~g~-----------------P~IliP~p~~~~~~Q~~NA~ 293 (357)
T COG0707 238 R-VLPF--IDDMAALLAAADLVISRAG----ALTIAELLALGV-----------------PAILVPYPPGADGHQEYNAK 293 (357)
T ss_pred E-EeeH--HhhHHHHHHhccEEEeCCc----ccHHHHHHHhCC-----------------CEEEeCCCCCccchHHHHHH
Confidence 1 1222 3569999999999886552 588999999966 4555444443 1222
Q ss_pred -----CCceeeCCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc
Q 003024 489 -----SGAIRVNPWN--IEATAEAMHEAIQMNEAEKQLRHEKHYRYVST 530 (856)
Q Consensus 489 -----~~al~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 530 (856)
..|+.+.-++ .+.+++.|.++++. .|+..+|....+.+..
T Consensus 294 ~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~--~~~l~~m~~~a~~~~~ 340 (357)
T COG0707 294 FLEKAGAALVIRQSELTPEKLAELILRLLSN--PEKLKAMAENAKKLGK 340 (357)
T ss_pred HHHhCCCEEEeccccCCHHHHHHHHHHHhcC--HHHHHHHHHHHHhcCC
Confidence 2366676555 88999999999974 3444455544444433
No 287
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=85.96 E-value=9.3 Score=43.36 Aligned_cols=98 Identities=16% Similarity=0.084 Sum_probs=59.0
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccc----cc--
Q 003024 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSP----SL-- 488 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~----~l-- 488 (856)
+.+.+.+++. .++..||++|. +-|.| +..|+++++. |+|+.-..+-.+ .+
T Consensus 277 v~~~~~~p~~---~ll~~~~~~I~---hgG~~-t~~Eal~~G~-----------------P~v~~p~~~dq~~~a~~l~~ 332 (392)
T TIGR01426 277 VEVRQWVPQL---EILKKADAFIT---HGGMN-STMEALFNGV-----------------PMVAVPQGADQPMTARRIAE 332 (392)
T ss_pred eEEeCCCCHH---HHHhhCCEEEE---CCCch-HHHHHHHhCC-----------------CEEecCCcccHHHHHHHHHH
Confidence 3455677765 56788998885 44665 6799999965 666654433221 12
Q ss_pred -CCceeeCC--CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhc-CCHHHHHH
Q 003024 489 -SGAIRVNP--WNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVST-HDVAYWAR 538 (856)
Q Consensus 489 -~~al~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~ 538 (856)
.-|+.++. .+.++++++|.++|..+ +.+.+.++..+.+.. ......++
T Consensus 333 ~g~g~~l~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~ 384 (392)
T TIGR01426 333 LGLGRHLPPEEVTAEKLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAAD 384 (392)
T ss_pred CCCEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHH
Confidence 12555553 46799999999999743 333444444444443 34444443
No 288
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=85.54 E-value=0.64 Score=45.68 Aligned_cols=56 Identities=13% Similarity=0.236 Sum_probs=37.2
Q ss_pred EEEEEecCCCCCCCCCCCCC----------------CCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC
Q 003024 592 RAILFDYDGTVMPQTSINKA----------------PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (856)
Q Consensus 592 rlI~~DlDGTLl~~~~~~~~----------------~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~ 649 (856)
|++++|+||||+........ .-|.+.+.|+.++ +...|+|.|..+...+...+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~--~~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELS--KHYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHH--HHCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHH--HhceEEEEEeehhhhhhHHHHhh
Confidence 68999999999973321110 2366777788863 35899999999998887777654
No 289
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=85.22 E-value=1.7 Score=44.22 Aligned_cols=35 Identities=11% Similarity=-0.033 Sum_probs=27.5
Q ss_pred CHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003024 613 SQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 613 s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
.+.+.+.|+.+ ++.|..++|+||.....++.+...
T Consensus 89 ~~~~~~~l~~l-~~~g~~v~ivS~s~~~~v~~~~~~ 123 (202)
T TIGR01490 89 YPEARDLIRWH-KAEGHTIVLVSASLTILVKPLARI 123 (202)
T ss_pred cHHHHHHHHHH-HHCCCEEEEEeCCcHHHHHHHHHH
Confidence 45666777776 677999999999998888887754
No 290
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=84.91 E-value=2.3 Score=52.33 Aligned_cols=87 Identities=17% Similarity=0.228 Sum_probs=48.9
Q ss_pred ceeEeecCcccccCCHHHHHHHHHcCCcEEEEEecC--CCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhh
Q 003024 564 GFRVVALDPNFRKLSIDAIVSAYLRSKSRAILFDYD--GTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDC 641 (856)
Q Consensus 564 ~~~~~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlD--GTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~ 641 (856)
||||+|+-. +.|+...+.++-+ .++-.+=+|++ |=++- ..+.-+++..+|++| .+.++..++|||-+...
T Consensus 663 GfRVIAlA~--K~L~~~~~~~~~~-~~Rd~vEs~l~FlGLiVm----eNkLK~~T~~VI~eL-~~AnIRtVMcTGDNllT 734 (1140)
T KOG0208|consen 663 GFRVIALAS--KELETSTLQKAQK-LSRDTVESNLEFLGLIVM----ENKLKEETKRVIDEL-NRANIRTVMCTGDNLLT 734 (1140)
T ss_pred CeEEEEEec--CccCcchHHHHhh-ccHhhhhccceeeEEEEe----ecccccccHHHHHHH-HhhcceEEEEcCCchhe
Confidence 689998754 3454443333322 22222222222 22232 334446666777776 66799999999999887
Q ss_pred HHHhhcCCCCccEEeeCCEE
Q 003024 642 LGKWFSPCKKLGIAAEHGYF 661 (856)
Q Consensus 642 l~~~~~~~~~lgliaenG~~ 661 (856)
.-...+ +.|++.+.+..
T Consensus 735 aisVak---eCgmi~p~~~v 751 (1140)
T KOG0208|consen 735 AISVAK---ECGMIEPQVKV 751 (1140)
T ss_pred eeehhh---cccccCCCCeE
Confidence 766663 44555544433
No 291
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=84.81 E-value=3.2 Score=42.70 Aligned_cols=38 Identities=21% Similarity=0.276 Sum_probs=29.6
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
-|...++.+++.- +++.. ++|+|||.+|.+||+.+...
T Consensus 191 ~ka~i~e~~~ele---~~d~s-a~~VGDSItDv~ml~~~rgr 228 (315)
T COG4030 191 EKAKIMEGYCELE---GIDFS-AVVVGDSITDVKMLEAARGR 228 (315)
T ss_pred chhHHHHHHHhhc---CCCcc-eeEecCcccchHHHHHhhcc
Confidence 3677777777764 55444 89999999999999999754
No 292
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=84.66 E-value=1.3 Score=54.09 Aligned_cols=90 Identities=21% Similarity=0.329 Sum_probs=61.8
Q ss_pred hHHHHHHHHHHHhcCCCeEEEEcC----------------eEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCc
Q 003024 723 QAKELLDHLESVLANEPAAVKSGQ----------------FIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDR 786 (856)
Q Consensus 723 ~a~el~~~L~~~l~~~~~~v~~g~----------------~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ 786 (856)
.+++.++.|++. +......+|+ .+=|+.|.+ |...++.+.++ | ..|+++||+.
T Consensus 541 ~a~~aI~~L~~~--Gi~~~mLTGDn~~~A~~iA~~lGId~v~AellPed--K~~~V~~l~~~----g---~~VamVGDGI 609 (713)
T COG2217 541 DAKEAIAALKAL--GIKVVMLTGDNRRTAEAIAKELGIDEVRAELLPED--KAEIVRELQAE----G---RKVAMVGDGI 609 (713)
T ss_pred hHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHcChHhheccCCcHH--HHHHHHHHHhc----C---CEEEEEeCCc
Confidence 366777777543 1124444443 245666654 88888888653 3 5799999999
Q ss_pred hhHHHHHHccccccCCCCCCCccEEEEEeCCC----ccccceEc--CChhHHHHHHH
Q 003024 787 SDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKAKYYL--DDAAEVVTMLE 837 (856)
Q Consensus 787 ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A~y~l--~~~~eV~~~L~ 837 (856)
||-+.+..+. +++++|.. ...|+.++ +|...|.++++
T Consensus 610 NDAPALA~Ad--------------VGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~ 652 (713)
T COG2217 610 NDAPALAAAD--------------VGIAMGSGTDVAIEAADVVLMRDDLSAVPEAID 652 (713)
T ss_pred hhHHHHhhcC--------------eeEeecCCcHHHHHhCCEEEecCCHHHHHHHHH
Confidence 9999999997 46788763 46777776 56777776664
No 293
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=84.49 E-value=1.5 Score=41.88 Aligned_cols=68 Identities=16% Similarity=0.151 Sum_probs=39.2
Q ss_pred CCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHH-----HHhHhCCEEcccCHHHHHHHHH
Q 003024 201 DDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEIL-----KALLNADLIGFHTFDYARHFLS 273 (856)
Q Consensus 201 ~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil-----~~ll~~dligf~t~~~~~~Fl~ 273 (856)
.|+|++|+++..++..+++++ .++|+.+.+|..+.... .++...++ ..+-.||.|-..+....+.+.+
T Consensus 74 ~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 74 PDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp -SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred CeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 399999999877777777744 38999999997543321 12222222 3445688888888766666654
No 294
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=84.27 E-value=9 Score=46.75 Aligned_cols=55 Identities=16% Similarity=0.261 Sum_probs=45.1
Q ss_pred HHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003024 586 YLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 586 y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
|......|.|+-+=|-+= .|-+++.++++. |.+.|+.|..+||-.....+.+-+.
T Consensus 566 ~~~~E~~LtFvGlVGi~D-------PPR~ev~~ai~~-c~~aGIrV~mITGD~~~TA~AI~r~ 620 (972)
T KOG0202|consen 566 RATAESDLTFVGLVGILD-------PPRPEVADAIEL-CRQAGIRVIMITGDNKETAEAIARE 620 (972)
T ss_pred ccccccceEEEEEeeccC-------CCchhHHHHHHH-HHHcCCEEEEEcCCCHHHHHHHHHH
Confidence 344556889988877544 477999999999 6999999999999999999888743
No 295
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=84.21 E-value=9.3 Score=42.32 Aligned_cols=139 Identities=16% Similarity=0.171 Sum_probs=84.7
Q ss_pred eEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEE
Q 003024 337 TVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVF 416 (856)
Q Consensus 337 ~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~ 416 (856)
.|+|| ..=|++-+....|+++.+.+. .+ +.++. |- +.|...+++.+++.+.+.++ ||. ..+..
T Consensus 187 tILvG-NSgd~sNnHieaL~~L~~~~~--~~----~kIiv---PL-sYg~~n~~Yi~~V~~~~~~l---F~~---~~~~i 249 (360)
T PF07429_consen 187 TILVG-NSGDPSNNHIEALEALKQQFG--DD----VKIIV---PL-SYGANNQAYIQQVIQAGKEL---FGA---ENFQI 249 (360)
T ss_pred EEEEc-CCCCCCccHHHHHHHHHHhcC--CC----eEEEE---EC-CCCCchHHHHHHHHHHHHHh---cCc---cceeE
Confidence 34444 446777777777776655321 12 22221 21 23333456777776666553 432 23556
Q ss_pred EcCCCCHHHHHHHHHhcceeeecccc-ccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-CCceee
Q 003024 417 IDKPVTLSERAAYYTIAECVVVTAVR-DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAIRV 494 (856)
Q Consensus 417 ~~~~v~~~el~aly~~ADv~vvtS~~-EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~V 494 (856)
+...++.+|..++++.+|+.++...| .|||-..+ .+.+ +.++++|+-.-....+ ..++.|
T Consensus 250 L~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~-----------------G~~v~L~~~np~~~~l~~~~ipV 311 (360)
T PF07429_consen 250 LTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL-----------------GKKVFLSRDNPFWQDLKEQGIPV 311 (360)
T ss_pred hhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc-----------------CCeEEEecCChHHHHHHhCCCeE
Confidence 78899999999999999999999976 89987654 2333 4589999877665555 335444
Q ss_pred ----CCCCHHHHHHHHHHHH
Q 003024 495 ----NPWNIEATAEAMHEAI 510 (856)
Q Consensus 495 ----nP~d~~~~A~ai~~aL 510 (856)
+.-|...+++|=+++.
T Consensus 312 lf~~d~L~~~~v~ea~rql~ 331 (360)
T PF07429_consen 312 LFYGDELDEALVREAQRQLA 331 (360)
T ss_pred EeccccCCHHHHHHHHHHHh
Confidence 3344455555444333
No 296
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=83.47 E-value=2.1 Score=43.91 Aligned_cols=57 Identities=9% Similarity=0.132 Sum_probs=41.2
Q ss_pred CCcEEEEEecCCCCCCCCCCCCC----CCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhc
Q 003024 589 SKSRAILFDYDGTVMPQTSINKA----PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~----~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 647 (856)
..+|++++|+|+||++..+.... .-|.+.+.|+.+ .+ ...|+|=|..+...+...+.
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~-~~-~feIvVwTAa~~~ya~~~l~ 79 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSA-YE-DYDIVIWSATSMKWIEIKMT 79 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHH-Hh-CCEEEEEecCCHHHHHHHHH
Confidence 45799999999999984321211 236677888885 33 78899999988887777664
No 297
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=83.40 E-value=4.1 Score=52.01 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=29.4
Q ss_pred CCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003024 756 VSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
.-|+..++.+.+. ..--+++|||+.||..|.+.|..
T Consensus 780 lQKA~Vv~lVk~~------~~~~TLAIGDGANDVsMIQ~AhV 815 (1151)
T KOG0206|consen 780 LQKALVVKLVKKG------LKAVTLAIGDGANDVSMIQEAHV 815 (1151)
T ss_pred HHHHHHHHHHHhc------CCceEEEeeCCCccchheeeCCc
Confidence 4499999998443 24679999999999999998864
No 298
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=82.86 E-value=0.72 Score=48.74 Aligned_cols=38 Identities=16% Similarity=0.048 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCC-chhHHHHHHcccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDD-RSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~ 798 (856)
+......+++++ |++++++++|||+ ..|+..-+.+|..
T Consensus 165 ~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~A~~aG~~ 203 (238)
T PRK10748 165 FSDMYHLAAEKL---NVPIGEILHVGDDLTTDVAGAIRCGMQ 203 (238)
T ss_pred cHHHHHHHHHHc---CCChhHEEEEcCCcHHHHHHHHHCCCe
Confidence 577788888888 9999999999999 5999999999973
No 299
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=82.82 E-value=5 Score=43.55 Aligned_cols=92 Identities=13% Similarity=0.069 Sum_probs=57.1
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003024 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pv 414 (856)
.+++++..|-.|+.+.....++|+.++ .++++ + .|++| +.. +.++++ ++.++. + ..+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~--i-~vv~G-~~~---~~~~~l----~~~~~~-~--------~~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS--I-TLVTG-SSN---PNLDEL----KKFAKE-Y--------PNI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce--E-EEEEC-CCC---cCHHHH----HHHHHh-C--------CCE
Confidence 367999999999987666777777654 22332 2 23333 221 223333 333332 1 113
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeec
Q 003024 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 457 (856)
. +.+. .+++..++..||++|.+ -|.+.+|+++|+.
T Consensus 227 ~-~~~~--~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~ 261 (279)
T TIGR03590 227 I-LFID--VENMAELMNEADLAIGA-----AGSTSWERCCLGL 261 (279)
T ss_pred E-EEeC--HHHHHHHHHHCCEEEEC-----CchHHHHHHHcCC
Confidence 3 3333 46899999999998874 4589999999965
No 300
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=82.25 E-value=1.6 Score=45.13 Aligned_cols=36 Identities=11% Similarity=0.168 Sum_probs=27.8
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC
Q 003024 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (856)
Q Consensus 612 ~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~ 649 (856)
+.+.+.+.|+.| ++. .+++|+||-....+..++..+
T Consensus 69 l~pga~ell~~l-k~~-~~~~IVS~~~~~~~~~il~~l 104 (203)
T TIGR02137 69 PLEGAVEFVDWL-RER-FQVVILSDTFYEFSQPLMRQL 104 (203)
T ss_pred CCccHHHHHHHH-HhC-CeEEEEeCChHHHHHHHHHHc
Confidence 456677788886 554 499999999999888887553
No 301
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=81.38 E-value=1.1 Score=45.64 Aligned_cols=28 Identities=14% Similarity=0.446 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEecCCChh
Q 003024 612 PSQAVISIINTLCNDARNTVFVVSGRGRD 640 (856)
Q Consensus 612 ~s~~~~~aL~~L~~d~g~~V~I~TGR~~~ 640 (856)
|-+.+.++|++| .+.|+.++++|+|+..
T Consensus 74 p~~gA~e~l~~L-~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 74 PIPGAVEALKKL-RDKGHEIVIITARPPE 101 (191)
T ss_dssp B-TTHHHHHHHH-HTSTTEEEEEEE-SSS
T ss_pred ccHHHHHHHHHH-HHcCCcEEEEEecCcc
Confidence 456788899998 6678788888888754
No 302
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=81.09 E-value=2.5 Score=41.94 Aligned_cols=56 Identities=9% Similarity=0.129 Sum_probs=34.6
Q ss_pred cEEEEEecCCCCCCCCCCCCC---------------------CCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003024 591 SRAILFDYDGTVMPQTSINKA---------------------PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~---------------------~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
++.+++|+|+||+........ .-+.+.+.|++| .+ ...++|.|.-+...+...+..
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l-~~-~yei~I~Ts~~~~yA~~il~~ 77 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERV-SK-WYELVIFTASLEEYADPVLDI 77 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHH-Hh-cCEEEEEcCCcHHHHHHHHHH
Confidence 368999999999973211100 124556677775 33 367777777777666666643
No 303
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=80.74 E-value=4 Score=42.06 Aligned_cols=106 Identities=19% Similarity=0.218 Sum_probs=63.9
Q ss_pred EEeeecCCCCCCchhHHHHHHHH--HHHhcCCCeEEEEcC---eEEEEEeCCCCHHHHHHHHHHHhhhcCCC-cceEEEE
Q 003024 709 VWHHRDADPGFGSSQAKELLDHL--ESVLANEPAAVKSGQ---FIVEVKPQGVSKGVVAEKIFTTMAESGRH-ADFVLCI 782 (856)
Q Consensus 709 ~~~~~~~dp~~~~~~a~el~~~L--~~~l~~~~~~v~~g~---~~vEI~p~gvsKG~al~~Ll~~l~~~gi~-~d~vlai 782 (856)
.|.|.+++.. .|..++..| ++.++.- ...-..+ .-+=.+| --.|.+..++.. |+. |.++++|
T Consensus 117 k~~FTNa~k~----HA~r~Lk~LGieDcFegi-i~~e~~np~~~~~vcKP----~~~afE~a~k~a---gi~~p~~t~Ff 184 (244)
T KOG3109|consen 117 KWIFTNAYKV----HAIRILKKLGIEDCFEGI-ICFETLNPIEKTVVCKP----SEEAFEKAMKVA---GIDSPRNTYFF 184 (244)
T ss_pred EEEecCCcHH----HHHHHHHHhChHHhccce-eEeeccCCCCCceeecC----CHHHHHHHHHHh---CCCCcCceEEE
Confidence 5677776543 244555554 3333321 1111111 4444556 456778888877 998 9999999
Q ss_pred eCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC--ccccceEcCChhHHHHHHHHH
Q 003024 783 GDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK--PSKAKYYLDDAAEVVTMLEAL 839 (856)
Q Consensus 783 GD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~s~A~y~l~~~~eV~~~L~~L 839 (856)
-||.+-+.--+.+|.. +|-+|.. ...+.|.+.......+.+-.|
T Consensus 185 DDS~~NI~~ak~vGl~-------------tvlv~~~~~~~~~d~~l~~ih~~k~a~p~l 230 (244)
T KOG3109|consen 185 DDSERNIQTAKEVGLK-------------TVLVGREHKIKGVDYALEQIHNNKEALPEL 230 (244)
T ss_pred cCchhhHHHHHhccce-------------eEEEEeeecccchHHHHHHhhchhhhchHH
Confidence 9999999999999873 6666643 345556554433333333333
No 304
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=80.57 E-value=3 Score=43.97 Aligned_cols=15 Identities=33% Similarity=0.545 Sum_probs=13.9
Q ss_pred CcEEEEEecCCCCCC
Q 003024 590 KSRAILFDYDGTVMP 604 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~ 604 (856)
++|+|+||+||||++
T Consensus 9 ~~k~iiFDlDGTL~D 23 (238)
T PRK10748 9 RISALTFDLDDTLYD 23 (238)
T ss_pred CceeEEEcCcccccC
Confidence 478999999999999
No 305
>PLN02811 hydrolase
Probab=80.47 E-value=2.4 Score=44.07 Aligned_cols=38 Identities=13% Similarity=0.001 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhhhcC---CCcceEEEEeCCchhHHHHHHcccc
Q 003024 758 KGVVAEKIFTTMAESG---RHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~g---i~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
+.......++++ + +.++++++|||+..|+.+-+.+|..
T Consensus 139 ~p~~~~~a~~~~---~~~~~~~~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 139 APDIFLAAARRF---EDGPVDPGKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred CcHHHHHHHHHh---CCCCCCccceEEEeccHhhHHHHHHCCCe
Confidence 566788888888 6 8899999999999999999999973
No 306
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=79.97 E-value=3 Score=41.14 Aligned_cols=60 Identities=15% Similarity=0.086 Sum_probs=43.8
Q ss_pred cCCcEEEEEecCCCCCCCCCCC------C--------------------------CCCHHHHHHHHHHHhhCCCeEEEec
Q 003024 588 RSKSRAILFDYDGTVMPQTSIN------K--------------------------APSQAVISIINTLCNDARNTVFVVS 635 (856)
Q Consensus 588 ~s~~rlI~~DlDGTLl~~~~~~------~--------------------------~~s~~~~~aL~~L~~d~g~~V~I~T 635 (856)
+.++..+++|+|.||+...... . .+-|.+.+.|++| + ++..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l-~-~~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEA-S-KLYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHH-H-hhcEEEEEe
Confidence 3567899999999999833210 0 0125677889987 4 459999999
Q ss_pred CCChhhHHHhhcCC
Q 003024 636 GRGRDCLGKWFSPC 649 (856)
Q Consensus 636 GR~~~~l~~~~~~~ 649 (856)
..+...+...+..+
T Consensus 81 ~~~~~yA~~vl~~l 94 (156)
T TIGR02250 81 MGTRAYAQAIAKLI 94 (156)
T ss_pred CCcHHHHHHHHHHh
Confidence 99999888887554
No 307
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=79.73 E-value=3.4 Score=41.01 Aligned_cols=71 Identities=17% Similarity=0.201 Sum_probs=51.4
Q ss_pred ccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCC------------------------------CCCCCCHHHHHHHHHHH
Q 003024 575 RKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTS------------------------------INKAPSQAVISIINTLC 624 (856)
Q Consensus 575 ~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~------------------------------~~~~~s~~~~~aL~~L~ 624 (856)
.-.++.+|.........-.+-||+|.|++-.++ ..-.++.++..-|-.+-
T Consensus 47 hwiSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MH 126 (237)
T COG3700 47 HWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMH 126 (237)
T ss_pred eEEEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHH
Confidence 346788888888887788888999999995221 01235566665555556
Q ss_pred hhCCCeEEEecCCChhhHHHh
Q 003024 625 NDARNTVFVVSGRGRDCLGKW 645 (856)
Q Consensus 625 ~d~g~~V~I~TGR~~~~l~~~ 645 (856)
+.+|-.|+++|||+...++..
T Consensus 127 q~RGD~i~FvTGRt~gk~d~v 147 (237)
T COG3700 127 QRRGDAIYFVTGRTPGKTDTV 147 (237)
T ss_pred HhcCCeEEEEecCCCCccccc
Confidence 889999999999998754443
No 308
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=79.33 E-value=2.3 Score=44.13 Aligned_cols=15 Identities=47% Similarity=0.786 Sum_probs=13.7
Q ss_pred CcEEEEEecCCCCCC
Q 003024 590 KSRAILFDYDGTVMP 604 (856)
Q Consensus 590 ~~rlI~~DlDGTLl~ 604 (856)
.+|+.+||+||||++
T Consensus 4 ~~~la~FDfDgTLt~ 18 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQ 18 (210)
T ss_pred cCcEEEEcCCCCCcc
Confidence 578999999999998
No 309
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=78.67 E-value=1.8 Score=46.68 Aligned_cols=38 Identities=13% Similarity=0.196 Sum_probs=30.7
Q ss_pred CCCHHHHHH-HHHHHhhhcC--CCcceEEEEeCCchhHHHHHHc
Q 003024 755 GVSKGVVAE-KIFTTMAESG--RHADFVLCIGDDRSDEDMFEII 795 (856)
Q Consensus 755 gvsKG~al~-~Ll~~l~~~g--i~~d~vlaiGD~~ND~~Mf~~a 795 (856)
..+|...+. ...+.+ + .++++|+++||+.||+.|..-+
T Consensus 190 ~~~K~~~v~~~~~~~~---~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 190 TFNKNHDVALRNTEYF---NQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred ccccHHHHHHHHHHHh---CccCCcceEEEECcChhhhhHhcCC
Confidence 357877666 567777 6 7889999999999999997666
No 310
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=77.58 E-value=4.1 Score=39.68 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
+..+.+.+++.+ |++++++++|||+..|+.+.+.+|..
T Consensus 135 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 135 DPDAYRRALEKL---GIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp SHHHHHHHHHHH---TSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 568899999999 99999999999999999999999973
No 311
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=76.71 E-value=2.6 Score=39.85 Aligned_cols=38 Identities=18% Similarity=0.166 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhhhcC-CCcceEEEEeC-CchhHHHHHHcccc
Q 003024 758 KGVVAEKIFTTMAESG-RHADFVLCIGD-DRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~g-i~~d~vlaiGD-~~ND~~Mf~~ag~~ 798 (856)
|...++.+++++ + ++++++++||| ..+|+.+.+.+|..
T Consensus 87 ~~~~~~~~~~~~---~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 87 KPGMFLEALKRF---NEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred ChHHHHHHHHHc---CCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 778899999988 6 89999999999 79999999999863
No 312
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=75.55 E-value=36 Score=38.70 Aligned_cols=190 Identities=18% Similarity=0.266 Sum_probs=109.1
Q ss_pred EeecccCchHHHHHhcC----chHHHHHHHH-HHHc-------CCCeEE-EeccCccc-cCCHHHHHHHHHHHH---HhC
Q 003024 303 IMPVGIHMGQIESVLRL----ADKDWRVQEL-KQQF-------EGKTVL-LGVDDMDI-FKGVDLKLLAMEHLL---KQH 365 (856)
Q Consensus 303 i~p~GId~~~~~~~~~~----~~~~~~~~~l-~~~~-------~~k~ii-l~VdRld~-~KGi~~~l~A~~~ll---~~~ 365 (856)
+.|+|.+...|.....- ...+++++++ |..| -+|++. .-.||..+ .||-+-.|+|+.+|- +.+
T Consensus 278 itPNGLNV~KFsA~HEFQNLHA~~KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~ 357 (692)
T KOG3742|consen 278 ITPNGLNVKKFSAVHEFQNLHAQKKEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVS 357 (692)
T ss_pred eCCCCcceeehhHHHHHHHHHHHHHHHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeec
Confidence 57999999988765321 1223444443 3333 145544 44688884 799999999998863 322
Q ss_pred CCCcCceEEEEEecCCCCCchhH-----HHHHHHHHHHHHHHhcccCCC-------------------------------
Q 003024 366 PKWQGRAVLVQIANPARGRGKDL-----EEIQAEIHATCKRINETFGRP------------------------------- 409 (856)
Q Consensus 366 p~~~~~vvLvqi~~p~r~~~~~~-----~~l~~~~~~lv~~IN~~~~~~------------------------------- 409 (856)
-.- +.|...+.-|++...-.. +...+++...+.++..++|..
T Consensus 358 ~s~--~TVVaFlImPaktN~FnVesLkgqAv~kqL~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a 435 (692)
T KOG3742|consen 358 GSP--KTVVAFLIMPAKTNSFNVESLKGQAVRKQLWDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFA 435 (692)
T ss_pred CCC--ceEEEEEEeecCCCccchhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHH
Confidence 111 222222333444332111 334455666666666555531
Q ss_pred ----Ccc--------------------------------cEEEEcCC------CCHHHHHHHHHhcceeeeccccccCCC
Q 003024 410 ----GYE--------------------------------PVVFIDKP------VTLSERAAYYTIAECVVVTAVRDGMNL 447 (856)
Q Consensus 410 ----~~~--------------------------------pvv~~~~~------v~~~el~aly~~ADv~vvtS~~EG~nL 447 (856)
... .+++.... +=.-+.-.+.+.|.+.|+||.+|..|-
T Consensus 436 ~~r~slPPv~THNm~dDa~DpiL~~iRr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVFPSYYEPWGY 515 (692)
T KOG3742|consen 436 LQRQSLPPVCTHNMIDDANDPILSSIRRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVFPSYYEPWGY 515 (692)
T ss_pred hccCCCCCceeccccccccchHHHHhHhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhccccccccccccCCCCC
Confidence 011 22221111 112245677889999999999999999
Q ss_pred cccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc----CC----ce-eeC-----C-CCHHHHHHHHHHHHc
Q 003024 448 TPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL----SG----AI-RVN-----P-WNIEATAEAMHEAIQ 511 (856)
Q Consensus 448 v~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l----~~----al-~Vn-----P-~d~~~~A~ai~~aL~ 511 (856)
+|.|..+.+. |-|.+..+|...-+ .+ || +|+ | .+++++++-|..-..
T Consensus 516 TPAECTVMGi-----------------PSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F~~ 577 (692)
T KOG3742|consen 516 TPAECTVMGI-----------------PSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEFCK 577 (692)
T ss_pred CchheEEecc-----------------ccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHHHH
Confidence 9999999854 66777666654333 11 43 333 2 345777777777664
No 313
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=75.02 E-value=5.7 Score=40.49 Aligned_cols=37 Identities=11% Similarity=0.203 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
+....+.+++++ |++++++++|||+..|+..-+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~p~~~l~vgD~~~di~aA~~aG~ 179 (199)
T PRK09456 143 EARIYQHVLQAE---GFSAADAVFFDDNADNIEAANALGI 179 (199)
T ss_pred CHHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHcCC
Confidence 566678888888 9999999999999999999999986
No 314
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=74.32 E-value=11 Score=46.12 Aligned_cols=39 Identities=21% Similarity=0.271 Sum_probs=33.9
Q ss_pred CCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCC
Q 003024 610 KAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPC 649 (856)
Q Consensus 610 ~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~ 649 (856)
...-|.+.++++. |+..|++|-.+||-.....+.+...|
T Consensus 646 DPvRPgV~~AV~~-Cq~AGItVRMVTGDNI~TAkAIA~eC 684 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQL-CQRAGITVRMVTGDNINTAKAIAREC 684 (1034)
T ss_pred CCCCCCcHHHHHH-HHHcCcEEEEEeCCcHHHHHHHHHHc
Confidence 3456899999999 99999999999999999999998543
No 315
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=74.19 E-value=4.9 Score=40.24 Aligned_cols=39 Identities=18% Similarity=0.188 Sum_probs=30.8
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003024 752 KPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
.+-|..|+..+..+.+ +++.++++|||.+|++.-+....
T Consensus 142 s~fG~dK~~vI~~l~e-------~~e~~fy~GDsvsDlsaaklsDl 180 (220)
T COG4359 142 SQFGHDKSSVIHELSE-------PNESIFYCGDSVSDLSAAKLSDL 180 (220)
T ss_pred cccCCCcchhHHHhhc-------CCceEEEecCCcccccHhhhhhh
Confidence 3568889999988865 35779999999999987776654
No 316
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=73.49 E-value=20 Score=34.73 Aligned_cols=73 Identities=19% Similarity=0.208 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 003024 353 LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI 432 (856)
Q Consensus 353 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ 432 (856)
.-+.++..+++++ ++..|.||.|-.-+|..+. ..+.+++.++++..+|+ .||++.+...+..+-...+..
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~----lpv~l~DERltTv~A~~~L~~ 109 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFN----LPVVLWDERLSTVEAERMLIE 109 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcC----CCEEEEcCccCHHHHHHHHHH
Confidence 3455566666665 4668889999877777765 67789999999999997 589999999888887777766
Q ss_pred cce
Q 003024 433 AEC 435 (856)
Q Consensus 433 ADv 435 (856)
+++
T Consensus 110 ~~~ 112 (141)
T COG0816 110 AGV 112 (141)
T ss_pred cCC
Confidence 554
No 317
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=72.03 E-value=4.7 Score=40.01 Aligned_cols=37 Identities=11% Similarity=0.121 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
+....+.+++.+ |++++++++|||+..|+.+-+.+|.
T Consensus 142 ~~~~~~~~~~~~---~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 142 DPDIYLLALKKL---GLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred CHHHHHHHHHHc---CCCcceEEEEcCCHHHHHHHHHcCC
Confidence 367788899988 9999999999999999999999986
No 318
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=71.33 E-value=8.5 Score=46.92 Aligned_cols=42 Identities=29% Similarity=0.383 Sum_probs=31.9
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccEEee
Q 003024 612 PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGIAAE 657 (856)
Q Consensus 612 ~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgliae 657 (856)
|...+=++..+ |+..|++|+.+||+.+...+... ...|++.+
T Consensus 591 PR~~vP~Av~~-CrsAGIkvimVTgdhpiTAkAiA---~~vgIi~~ 632 (1019)
T KOG0203|consen 591 PRAAVPDAVGK-CRSAGIKVIMVTGDHPITAKAIA---KSVGIISE 632 (1019)
T ss_pred CcccCchhhhh-hhhhCceEEEEecCccchhhhhh---hheeeecC
Confidence 44444566667 88899999999999999998888 34565544
No 319
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=69.92 E-value=5.3 Score=40.77 Aligned_cols=13 Identities=15% Similarity=0.396 Sum_probs=11.9
Q ss_pred EEEEEecCCCCCC
Q 003024 592 RAILFDYDGTVMP 604 (856)
Q Consensus 592 rlI~~DlDGTLl~ 604 (856)
++|+||+||||++
T Consensus 1 ~~viFDldgvL~d 13 (199)
T PRK09456 1 MLYIFDLGNVIVD 13 (199)
T ss_pred CEEEEeCCCcccc
Confidence 4799999999998
No 320
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=68.65 E-value=1.9 Score=42.88 Aligned_cols=34 Identities=29% Similarity=0.230 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHH
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEI 794 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ 794 (856)
.....+.+++++ |++++++++|||+..|+..-+.
T Consensus 141 ~p~~f~~~~~~~---~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 141 DPVVYELVFDTV---GLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred CHHHHHHHHHHH---CCCHHHeEeEecChhhHHHHhc
Confidence 466678888888 9999999999999999887553
No 321
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=66.89 E-value=93 Score=32.16 Aligned_cols=48 Identities=23% Similarity=0.273 Sum_probs=29.7
Q ss_pred ceEEecCCcccccccCC-----ceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHh
Q 003024 474 SMLVVSEFIGCSPSLSG-----AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHY 525 (856)
Q Consensus 474 g~lV~Se~~G~~~~l~~-----al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 525 (856)
+|++.-|-+|+.--+.+ .+-|+|.+--++|.||+-.+ +|.+.|.++..
T Consensus 186 sPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRlSM----EEer~rQe~aa 238 (259)
T KOG2884|consen 186 SPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRLSM----EEERARQERAA 238 (259)
T ss_pred CceeccCcccccccccccccccccCCCcccCHHHHHHHHhhH----HHHHHHHHHHh
Confidence 46666665554444421 36788998889999887544 35555555433
No 322
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=65.73 E-value=6.6 Score=46.42 Aligned_cols=110 Identities=13% Similarity=0.196 Sum_probs=60.4
Q ss_pred cccccCcccceeEeecCcccccCCHHHHHHHHH-cCCcEEEEEecCCCCCCCCC-------CCCCC-CHHHHHHHHHHHh
Q 003024 555 RCWGIGLSFGFRVVALDPNFRKLSIDAIVSAYL-RSKSRAILFDYDGTVMPQTS-------INKAP-SQAVISIINTLCN 625 (856)
Q Consensus 555 ~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~-~s~~rlI~~DlDGTLl~~~~-------~~~~~-s~~~~~aL~~L~~ 625 (856)
.|.++-+|.|.=+-+.+.+|+--.. .-..-|. +-..|+|+.|+|||++.... ..+.= ..-+.+...+. .
T Consensus 494 ~sLnLk~G~N~v~FsisT~~~Gt~~-c~~~IYlWkWn~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~I-k 571 (738)
T KOG2116|consen 494 KSLNLKDGKNDVVFSISTQYQGTAQ-CEGNIYLWKWNDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKI-K 571 (738)
T ss_pred hhcCCccCCceeEEEEEecccceEE-EeeEEEEEecCCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHH-H
Confidence 3555666665444444433321100 0001122 23568999999999997221 01111 24555666664 7
Q ss_pred hCCCeEEEecCCChh---hHHHhhcCCCCccEEeeCCEEEEeCC
Q 003024 626 DARNTVFVVSGRGRD---CLGKWFSPCKKLGIAAEHGYFMRWSA 666 (856)
Q Consensus 626 d~g~~V~I~TGR~~~---~l~~~~~~~~~lgliaenG~~I~~~~ 666 (856)
++|++++.+|.|... ..+.++..+..-|-+--.|-+|..+.
T Consensus 572 ~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd 615 (738)
T KOG2116|consen 572 ENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPD 615 (738)
T ss_pred hCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCC
Confidence 789999999999975 34455544444444444555555543
No 323
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=64.36 E-value=3.5 Score=46.25 Aligned_cols=53 Identities=13% Similarity=0.253 Sum_probs=33.8
Q ss_pred cCCcEEEEEecCCCCCCCCCCCCC-----------CCHHHHHHHHHHHhhCCCeEEEecCCChhhHHH
Q 003024 588 RSKSRAILFDYDGTVMPQTSINKA-----------PSQAVISIINTLCNDARNTVFVVSGRGRDCLGK 644 (856)
Q Consensus 588 ~s~~rlI~~DlDGTLl~~~~~~~~-----------~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~ 644 (856)
+...+++++|+|||++. ++.. -+..+....... ...|..|.-.|.|+.-.+..
T Consensus 372 r~n~kiVVsDiDGTITk---SD~~Ghv~~miGkdwth~gVAkLYtdI-~rNGYkI~YltsR~~Gqa~s 435 (580)
T COG5083 372 RNNKKIVVSDIDGTITK---SDALGHVKQMIGKDWTHNGVAKLYTDI-DRNGYKIKYLTSRSYGQADS 435 (580)
T ss_pred eCCCcEEEEecCCcEEe---hhhHHHHHHHhccchhhcchhhhhhhh-ccCceEEEEEecccccchhh
Confidence 45679999999999997 3221 123333444443 44677888888888764433
No 324
>PRK14986 glycogen phosphorylase; Provisional
Probab=64.17 E-value=1.3e+02 Score=37.44 Aligned_cols=136 Identities=15% Similarity=0.063 Sum_probs=85.0
Q ss_pred CCeEEEeccCccccCCHHH-HHHHHHHHH--HhCCCCc-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 003024 335 GKTVLLGVDDMDIFKGVDL-KLLAMEHLL--KQHPKWQ-GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPG 410 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi~~-~l~A~~~ll--~~~p~~~-~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~ 410 (856)
+-..++.+-|+..-|-..+ .|..++++. .++|+.. ..+++|..|-..-++... .++.+.|.++++-||..=...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMA-KHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHH-HHHHHHHHHHHHHhccChhhcC
Confidence 4467888999999998888 777777663 4566522 246666666544333322 4567788888888886533334
Q ss_pred cccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc
Q 003024 411 YEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL 488 (856)
Q Consensus 411 ~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (856)
.-.|+|+. ...-.--..++.+|||-..+|+ .++|| |+.++-++ --.|+|-+|..-|.-.++
T Consensus 621 ~lkVVFle-nY~vslAe~lipg~Dv~eqis~------ag~EA--SGTsnMK~--------alNGaLtlgtlDG~nvEi 681 (815)
T PRK14986 621 KLKVVFIP-NYSVSLAQLIIPAADLSEQISL------AGTEA--SGTSNMKF--------ALNGALTIGTLDGANVEM 681 (815)
T ss_pred ceeEEEeC-CCCHHHHHHhhhhhhhhhhCCC------CCccc--cCcchhhH--------HhcCceeeeccCCchhHH
Confidence 44577776 3444455568899999888775 34453 32222111 114678888777766555
No 325
>COG4996 Predicted phosphatase [General function prediction only]
Probab=63.36 E-value=12 Score=35.34 Aligned_cols=54 Identities=22% Similarity=0.116 Sum_probs=32.7
Q ss_pred EEEEEecCCCCCCCCCC--CC----C---------------CCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhh
Q 003024 592 RAILFDYDGTVMPQTSI--NK----A---------------PSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWF 646 (856)
Q Consensus 592 rlI~~DlDGTLl~~~~~--~~----~---------------~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~ 646 (856)
++|+||.||||.++... -+ . .-+.+++.|+. ++..|..+..+|=.-.....+.+
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~w-arnsG~i~~~~sWN~~~kA~~aL 75 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKW-ARNSGYILGLASWNFEDKAIKAL 75 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHH-HHhCCcEEEEeecCchHHHHHHH
Confidence 57999999999984320 00 0 12556666666 36666666666655555444444
No 326
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=63.03 E-value=83 Score=34.61 Aligned_cols=124 Identities=15% Similarity=0.110 Sum_probs=76.4
Q ss_pred CeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEE-EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003024 336 KTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQ-IANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (856)
Q Consensus 336 k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvq-i~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pv 414 (856)
+..|+-=..=|+.-...+.|.++.+.+.+ ++.++. .+.|+ | .+++.++|.+...+ .||. ..+
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~---g--n~~Yi~~V~~~~~~---lF~~---~~~ 208 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA---N--NQAYIEEVRQAGLA---LFGA---ENF 208 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC---C--CHHHHHHHHHHHHH---hcCc---ccE
Confidence 33333334567888888888888776432 232332 22222 1 14566666666554 4542 236
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeecccc-ccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc-CCce
Q 003024 415 VFIDKPVTLSERAAYYTIAECVVVTAVR-DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL-SGAI 492 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~-EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al 492 (856)
..+.+.++.+|..++++.+|+.++.--| .|+|...+=.-. +.++++|+-.-.-..+ ..++
T Consensus 209 ~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~------------------G~~v~l~r~n~fwqdl~e~gv 270 (322)
T PRK02797 209 QILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQL------------------GKPVVLSRDNPFWQDLTEQGL 270 (322)
T ss_pred EehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHC------------------CCcEEEecCCchHHHHHhCCC
Confidence 6788999999999999999999988764 899876643222 3477777554443344 3455
Q ss_pred ee
Q 003024 493 RV 494 (856)
Q Consensus 493 ~V 494 (856)
-|
T Consensus 271 ~V 272 (322)
T PRK02797 271 PV 272 (322)
T ss_pred eE
Confidence 44
No 327
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=63.01 E-value=16 Score=38.14 Aligned_cols=38 Identities=18% Similarity=0.124 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
+......+++++ |++++++++|||+..|+..-+.+|..
T Consensus 154 ~p~~y~~i~~~l---gv~p~e~lfVgDs~~Di~AA~~AG~~ 191 (220)
T TIGR01691 154 EAQSYVKIAGQL---GSPPREILFLSDIINELDAARKAGLH 191 (220)
T ss_pred CHHHHHHHHHHh---CcChhHEEEEeCCHHHHHHHHHcCCE
Confidence 677889999999 99999999999999999999999973
No 328
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=62.59 E-value=13 Score=37.37 Aligned_cols=41 Identities=15% Similarity=0.064 Sum_probs=31.1
Q ss_pred CHHHHHHHHHHHhhhc---CCCcceEEEEeCCchhHHHHHHccc
Q 003024 757 SKGVVAEKIFTTMAES---GRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~---gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
+|..-...+++.+... |++++++++|||+..|+..-+.+|.
T Consensus 108 ~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi 151 (174)
T TIGR01685 108 NKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGV 151 (174)
T ss_pred chHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCC
Confidence 4555555555555322 4899999999999999999998886
No 329
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=59.98 E-value=60 Score=38.43 Aligned_cols=95 Identities=22% Similarity=0.173 Sum_probs=70.7
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHH
Q 003024 345 MDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLS 424 (856)
Q Consensus 345 ld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~ 424 (856)
=-++|=.++.+.-+-++|+.-|+-. |++.+.+ +.++..+.+++++++-.- +..-. .|..+.+.+
T Consensus 437 ~n~~K~~pev~~~wmqIL~~vP~Sv----l~L~~~~------~~~~~~~~l~~la~~~Gv-----~~eRL-~f~p~~~~~ 500 (620)
T COG3914 437 NNYFKITPEVFALWMQILSAVPNSV----LLLKAGG------DDAEINARLRDLAEREGV-----DSERL-RFLPPAPNE 500 (620)
T ss_pred CCcccCCHHHHHHHHHHHHhCCCcE----EEEecCC------CcHHHHHHHHHHHHHcCC-----Chhhe-eecCCCCCH
Confidence 3567888999999999999999753 6665532 335677777777777432 33333 356678888
Q ss_pred HHHHHHHhcceeeeccccccCCCcccceeeee
Q 003024 425 ERAAYYTIAECVVVTAVRDGMNLTPYEYIVCR 456 (856)
Q Consensus 425 el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~ 456 (856)
+-.|.|..||+++-|=-+-| ..++.|++.++
T Consensus 501 ~h~a~~~iADlvLDTyPY~g-~TTa~daLwm~ 531 (620)
T COG3914 501 DHRARYGIADLVLDTYPYGG-HTTASDALWMG 531 (620)
T ss_pred HHHHhhchhheeeecccCCC-ccchHHHHHhc
Confidence 99999999999998877665 47889999873
No 330
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=59.16 E-value=7.4 Score=43.40 Aligned_cols=48 Identities=29% Similarity=0.505 Sum_probs=34.6
Q ss_pred CCcEEEEEecCCCCCCCCC--------CC-CCCCHHHHHHHHHHHhhCCCeEEEecCC
Q 003024 589 SKSRAILFDYDGTVMPQTS--------IN-KAPSQAVISIINTLCNDARNTVFVVSGR 637 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~--------~~-~~~s~~~~~aL~~L~~d~g~~V~I~TGR 637 (856)
-..|.+.|||||||++..+ .+ ..+.++.-.-|++| ..+|+.++|.|-.
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl-~~~g~~l~iftnq 129 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTL-YQDGIKLFIFTNQ 129 (422)
T ss_pred CCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhh-ccCCeEEEEEecc
Confidence 3578999999999998443 11 12346666778887 6679999998743
No 331
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=57.99 E-value=8.4 Score=41.84 Aligned_cols=42 Identities=14% Similarity=0.376 Sum_probs=32.0
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhC---CCeEEEecC
Q 003024 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDA---RNTVFVVSG 636 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~---g~~V~I~TG 636 (856)
.--|+||+||.|+. .+.+-+...++|+.|..++ .+.+++.|-
T Consensus 35 ~fgfafDIDGVL~R----G~~~i~~~~~Alr~L~~~~g~lkIP~vfLTN 79 (389)
T KOG1618|consen 35 TFGFAFDIDGVLFR----GHRPIPGALKALRRLVDNQGQLKIPFVFLTN 79 (389)
T ss_pred ceeEEEecccEEEe----cCCCCcchHHHHHHHHhcCCCeeccEEEEeC
Confidence 45899999999996 5677788999999984443 455666653
No 332
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=56.44 E-value=2.6e+02 Score=34.43 Aligned_cols=133 Identities=14% Similarity=0.113 Sum_probs=74.3
Q ss_pred CCeEEEeccCccccCCHHHH-HH---HHHHHHHhCCCCc-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 003024 335 GKTVLLGVDDMDIFKGVDLK-LL---AMEHLLKQHPKWQ-GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP 409 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi~~~-l~---A~~~ll~~~p~~~-~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~ 409 (856)
+...++.+-|+..-|=..+. |. -+.+++ +.|+.. ..+++|..|-..-++... .++.+.+.++++.||..-.-.
T Consensus 443 ~slfdv~~rR~heYKRq~LniL~ii~~y~rik-~~p~~~~~Pv~~IFaGKAhP~d~~g-K~iIk~I~~va~~in~Dp~v~ 520 (713)
T PF00343_consen 443 DSLFDVQARRFHEYKRQLLNILHIIDRYNRIK-NNPNKKIRPVQFIFAGKAHPGDYMG-KEIIKLINNVAEVINNDPEVG 520 (713)
T ss_dssp TSEEEEEES-SCCCCTHHHHHHHHHHHHHHHH-HSTTSCCS-EEEEEE----TT-HHH-HHHHHHHHHHHHHHCT-TTTC
T ss_pred chhhhhhhhhcccccccCcccccHHHHHHHHH-hcccCCCCCeEEEEeccCCCCcHHH-HHHHHHHHHHHHHHhcChhhc
Confidence 45678899999999987773 33 344443 455532 246666555433222222 456677778888888654333
Q ss_pred CcccEEEEcCCCCHHHHHHHHHhcceeeecccc--ccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccc
Q 003024 410 GYEPVVFIDKPVTLSERAAYYTIAECVVVTAVR--DGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS 487 (856)
Q Consensus 410 ~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~--EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (856)
+.-.|+|+. ..+-.--.-++.+|||-..+|++ |.=|.--.-++. .|.+.+|..-|+--+
T Consensus 521 ~~lkVvFle-nYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~------------------NGaL~lstlDG~niE 581 (713)
T PF00343_consen 521 DRLKVVFLE-NYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAM------------------NGALNLSTLDGWNIE 581 (713)
T ss_dssp CGEEEEEET-T-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHH------------------TT-EEEEESSTCHHH
T ss_pred cceeEEeec-CCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhc------------------CCCeEEecccchhHH
Confidence 444577665 45566666789999999999874 444444444444 468888888887655
Q ss_pred c
Q 003024 488 L 488 (856)
Q Consensus 488 l 488 (856)
+
T Consensus 582 i 582 (713)
T PF00343_consen 582 I 582 (713)
T ss_dssp H
T ss_pred H
Confidence 4
No 333
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=56.35 E-value=2.1e+02 Score=35.77 Aligned_cols=137 Identities=15% Similarity=0.075 Sum_probs=84.5
Q ss_pred CCCeEEEeccCccccCCHHH-HHHHHHHHH--HhCCCCc-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 003024 334 EGKTVLLGVDDMDIFKGVDL-KLLAMEHLL--KQHPKWQ-GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP 409 (856)
Q Consensus 334 ~~k~iil~VdRld~~KGi~~-~l~A~~~ll--~~~p~~~-~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~ 409 (856)
++...++.+-|+..-|-..+ .|.-++++. .++|+.. ..+++|..|-..-++... .++.+.+..+++.||..-.-.
T Consensus 528 p~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIklI~~va~~in~Dp~v~ 606 (797)
T cd04300 528 PDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMA-KLIIKLINAVADVVNNDPDVG 606 (797)
T ss_pred CCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHH-HHHHHHHHHHHHHhccChhcC
Confidence 35567899999999998887 766666653 3456522 246666666544333322 466778888888888764434
Q ss_pred CcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc
Q 003024 410 GYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL 488 (856)
Q Consensus 410 ~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (856)
++-.|+|+.. ..-.--..++.+|||-..+|+ .++|| |+.++-++ -=.|.|.+|..-|+-.++
T Consensus 607 ~~lkVVFlen-Y~VslAe~iipaaDvseqis~------ag~EA--SGTsnMK~--------~lNGaltlgtlDGanvEi 668 (797)
T cd04300 607 DKLKVVFLPN-YNVSLAEKIIPAADLSEQIST------AGKEA--SGTGNMKF--------MLNGALTIGTLDGANVEI 668 (797)
T ss_pred CceEEEEeCC-CChHHHHHhhhhhhhhhhCCC------CCccc--cCCchhhH--------HhcCceeeecccchhHHH
Confidence 5555777763 344444567899999777765 45553 33222111 114677777777765544
No 334
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=56.22 E-value=3e+02 Score=30.91 Aligned_cols=27 Identities=11% Similarity=0.022 Sum_probs=23.2
Q ss_pred HHHHHHhcceeeeccccccCCCcccceeeeec
Q 003024 426 RAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (856)
Q Consensus 426 l~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 457 (856)
...+|++||+++..| |.+.+|++.++.
T Consensus 229 ~~~~m~~aDlal~~S-----GT~TLE~al~g~ 255 (347)
T PRK14089 229 THKALLEAEFAFICS-----GTATLEAALIGT 255 (347)
T ss_pred HHHHHHhhhHHHhcC-----cHHHHHHHHhCC
Confidence 457899999999998 688889999865
No 335
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=54.61 E-value=10 Score=39.74 Aligned_cols=58 Identities=19% Similarity=0.372 Sum_probs=41.1
Q ss_pred cCCcEEEEEecCCCCCCCCC-------C----------------CCCCCHHHHHHHHHHHhhCCCeEEEecCCChhh-HH
Q 003024 588 RSKSRAILFDYDGTVMPQTS-------I----------------NKAPSQAVISIINTLCNDARNTVFVVSGRGRDC-LG 643 (856)
Q Consensus 588 ~s~~rlI~~DlDGTLl~~~~-------~----------------~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~-l~ 643 (856)
+-+.+.|++|+|-|+++-.+ + ..++-+-..+.|+- +...|..|+.+|-|..+. ..
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Y-vn~~Gg~ifyiSNR~~~~~~~ 154 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNY-VNSNGGKIFYISNRDQENEKD 154 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHH-HHhcCcEEEEEeccchhcccc
Confidence 34566999999999998322 1 11234666777887 578899999999999876 43
Q ss_pred Hhh
Q 003024 644 KWF 646 (856)
Q Consensus 644 ~~~ 646 (856)
..+
T Consensus 155 ~T~ 157 (274)
T COG2503 155 GTI 157 (274)
T ss_pred hhH
Confidence 333
No 336
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=53.25 E-value=11 Score=37.34 Aligned_cols=24 Identities=25% Similarity=0.515 Sum_probs=16.6
Q ss_pred EEEEecCCCCCCCCCCCCCCCHHHHHHHHHH
Q 003024 593 AILFDYDGTVMPQTSINKAPSQAVISIINTL 623 (856)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L 623 (856)
+|+||+||||++ .. +...++++.+
T Consensus 1 ~viFD~DGTL~D---~~----~~~~~~~~~~ 24 (175)
T TIGR01493 1 AMVFDVYGTLVD---VH----GGVRACLAAI 24 (175)
T ss_pred CeEEecCCcCcc---cH----HHHHHHHHHh
Confidence 479999999999 32 3444555554
No 337
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=51.41 E-value=1.1e+02 Score=30.70 Aligned_cols=49 Identities=18% Similarity=0.175 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHHHHHHHHH----cCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEE
Q 003024 178 LWEAYVSANKIFSQRVIEV----INPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFF 230 (856)
Q Consensus 178 ~w~~Y~~vN~~fa~~i~~~----~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~f 230 (856)
.|+.=...=+..|+.+.+. +.| |+|.-| +-+.=+-+||+.+|++++.-+
T Consensus 42 ~~e~~~~rg~av~~a~~~L~~~Gf~P--DvI~~H--~GWGe~Lflkdv~P~a~li~Y 94 (171)
T PF12000_consen 42 DFEAAVLRGQAVARAARQLRAQGFVP--DVIIAH--PGWGETLFLKDVFPDAPLIGY 94 (171)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCC--CEEEEc--CCcchhhhHHHhCCCCcEEEE
Confidence 3444444445555555443 345 999999 999999999999999998754
No 338
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=51.12 E-value=25 Score=37.25 Aligned_cols=29 Identities=14% Similarity=0.092 Sum_probs=24.7
Q ss_pred EEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC
Q 003024 779 VLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK 818 (856)
Q Consensus 779 vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 818 (856)
++++||+.||+...+.+|.. .++|.+|..
T Consensus 187 ~i~vGDs~~DI~aAk~AGi~-----------~I~V~~g~~ 215 (237)
T TIGR01672 187 RIHYGDSDNDITAAKEAGAR-----------GIRILRASN 215 (237)
T ss_pred eEEEeCCHHHHHHHHHCCCC-----------EEEEEecCC
Confidence 79999999999999999873 478888854
No 339
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=49.97 E-value=14 Score=35.09 Aligned_cols=48 Identities=17% Similarity=0.113 Sum_probs=40.7
Q ss_pred EEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhc
Q 003024 594 ILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFS 647 (856)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~ 647 (856)
.+.++++|+.. ..+.-+++.+.|++| .+- +.|+|+||-.+.++.+...
T Consensus 17 ~~~~v~~tiat----gGklf~ev~e~iqeL-~d~-V~i~IASgDr~gsl~~lae 64 (152)
T COG4087 17 KAGKVLYTIAT----GGKLFSEVSETIQEL-HDM-VDIYIASGDRKGSLVQLAE 64 (152)
T ss_pred ecceEEEEEcc----CcEEcHhhHHHHHHH-HHh-heEEEecCCcchHHHHHHH
Confidence 45688899985 667788999999998 666 9999999999999998883
No 340
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=49.50 E-value=75 Score=35.11 Aligned_cols=100 Identities=16% Similarity=0.114 Sum_probs=53.0
Q ss_pred CCeEEEeccC--ccccCCHH---HHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 003024 335 GKTVLLGVDD--MDIFKGVD---LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRP 409 (856)
Q Consensus 335 ~k~iil~VdR--ld~~KGi~---~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~ 409 (856)
...+.+-||- =.+.=+-. .++..+..+.+.++ .. +. |. .||-..+ +..+.+.+..+.
T Consensus 146 ~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~----~~-vt-tSRRTp~---~~~~~L~~~~~~-------- 207 (311)
T PF06258_consen 146 RPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GS----LL-VT-TSRRTPP---EAEAALRELLKD-------- 207 (311)
T ss_pred CCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-Ce----EE-EE-cCCCCcH---HHHHHHHHhhcC--------
Confidence 4455555553 12222223 56677777777776 22 22 33 3333332 233333333221
Q ss_pred CcccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeec
Q 003024 410 GYEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQ 457 (856)
Q Consensus 410 ~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~ 457 (856)
..-+.++. .-+..=+.+++..||.++||. |..++ +.||++++.
T Consensus 208 -~~~~~~~~-~~~~nPy~~~La~ad~i~VT~--DSvSM-vsEA~~tG~ 250 (311)
T PF06258_consen 208 -NPGVYIWD-GTGENPYLGFLAAADAIVVTE--DSVSM-VSEAAATGK 250 (311)
T ss_pred -CCceEEec-CCCCCcHHHHHHhCCEEEEcC--ccHHH-HHHHHHcCC
Confidence 11132343 233445889999999999997 44444 569999854
No 341
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=49.22 E-value=7.1 Score=37.95 Aligned_cols=33 Identities=18% Similarity=0.063 Sum_probs=27.3
Q ss_pred HHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccc
Q 003024 762 AEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGN 797 (856)
Q Consensus 762 l~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (856)
..+.++.+ |.+++++++|||+.+|..+...++.
T Consensus 104 ~~k~l~~l---~~~p~~~i~i~Ds~~~~~aa~~ngI 136 (148)
T smart00577 104 YVKDLSLL---GRDLSNVIIIDDSPDSWPFHPENLI 136 (148)
T ss_pred EeecHHHc---CCChhcEEEEECCHHHhhcCccCEE
Confidence 45556777 9999999999999999998776654
No 342
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=49.08 E-value=24 Score=43.60 Aligned_cols=68 Identities=22% Similarity=0.280 Sum_probs=48.3
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC----cccc
Q 003024 747 FIVEVKPQGVSKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK----PSKA 822 (856)
Q Consensus 747 ~~vEI~p~gvsKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~A 822 (856)
-+-|++|.+ |..-++.|.+. + .-|.++||+.||-+.|..+.. ++++|.. ...|
T Consensus 765 V~aev~P~~--K~~~Ik~lq~~----~---~~VaMVGDGINDaPALA~AdV--------------GIaig~gs~vAieaA 821 (951)
T KOG0207|consen 765 VYAEVLPEQ--KAEKIKEIQKN----G---GPVAMVGDGINDAPALAQADV--------------GIAIGAGSDVAIEAA 821 (951)
T ss_pred EEeccCchh--hHHHHHHHHhc----C---CcEEEEeCCCCccHHHHhhcc--------------ceeeccccHHHHhhC
Confidence 466777754 88888887664 2 448999999999999999975 4666553 4567
Q ss_pred ceEc--CChhHHHHHHH
Q 003024 823 KYYL--DDAAEVVTMLE 837 (856)
Q Consensus 823 ~y~l--~~~~eV~~~L~ 837 (856)
+.++ ++-.+|...++
T Consensus 822 DIVLmrn~L~~v~~ai~ 838 (951)
T KOG0207|consen 822 DIVLMRNDLRDVPFAID 838 (951)
T ss_pred CEEEEccchhhhHHHHH
Confidence 7776 55566555554
No 343
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=48.95 E-value=13 Score=35.50 Aligned_cols=54 Identities=19% Similarity=0.267 Sum_probs=37.4
Q ss_pred cEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCC--hhhHHHhhcC
Q 003024 591 SRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRG--RDCLGKWFSP 648 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~--~~~l~~~~~~ 648 (856)
.-+=++||||.|+.-.|...--..++++.+.+. |..|+|+|--. ++.++++...
T Consensus 43 tgiAildL~G~~l~l~S~R~~~~~evi~~I~~~----G~PviVAtDV~p~P~~V~Kia~~ 98 (138)
T PF04312_consen 43 TGIAILDLDGELLDLKSSRNMSRSEVIEWISEY----GKPVIVATDVSPPPETVKKIARS 98 (138)
T ss_pred eEEEEEecCCcEEEEEeecCCCHHHHHHHHHHc----CCEEEEEecCCCCcHHHHHHHHH
Confidence 457789999999985533333346666666664 99999999654 4566666643
No 344
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=48.95 E-value=6.2 Score=40.19 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=30.1
Q ss_pred HHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcc
Q 003024 760 VVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIG 796 (856)
Q Consensus 760 ~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 796 (856)
..+..+++.+ +.++..|+++||+.||.+|++.||
T Consensus 182 k~~~~~i~~l---~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 182 KIFLRIIKEL---QVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHHHH---TCTGGGEEEEESSGGHHHHHHHSS
T ss_pred hhHHHHHHHH---hcCCCEEEEEccCHHHHHHHHhCc
Confidence 3668888888 888899999999999999999985
No 345
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=48.76 E-value=13 Score=40.25 Aligned_cols=61 Identities=18% Similarity=0.346 Sum_probs=44.3
Q ss_pred CCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcCCCCccE
Q 003024 589 SKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSPCKKLGI 654 (856)
Q Consensus 589 s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~~~~lgl 654 (856)
...-.|+||-||.|.. ...+-+-+.++|+.| +..|-.++++|--+..+.+.++.....+|+
T Consensus 20 ~~~DtfifDcDGVlW~----g~~~ipGs~e~l~~L-~~~gK~i~fvTNNStksr~~y~kK~~~lG~ 80 (306)
T KOG2882|consen 20 DSFDTFIFDCDGVLWL----GEKPIPGSPEALNLL-KSLGKQIIFVTNNSTKSREQYMKKFAKLGF 80 (306)
T ss_pred hhcCEEEEcCCcceee----cCCCCCChHHHHHHH-HHcCCcEEEEeCCCcchHHHHHHHHHHhCc
Confidence 3577999999999996 334445566666665 445889999999888888888765544544
No 346
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=48.25 E-value=3.9e+02 Score=28.89 Aligned_cols=66 Identities=20% Similarity=0.139 Sum_probs=42.9
Q ss_pred CHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc--------CC-ce
Q 003024 422 TLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL--------SG-AI 492 (856)
Q Consensus 422 ~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--------~~-al 492 (856)
+..++..++..||++|-.+ |+| +..|+++++. |+|+=-..|..|+. .| |+
T Consensus 240 ~~~~~~~~m~~ad~vIs~~---G~~-t~~Ea~~~g~-----------------P~l~ip~~~~~EQ~~~a~~l~~~G~~~ 298 (318)
T PF13528_consen 240 STPDFAELMAAADLVISKG---GYT-TISEALALGK-----------------PALVIPRPGQDEQEYNARKLEELGLGI 298 (318)
T ss_pred ChHHHHHHHHhCCEEEECC---CHH-HHHHHHHcCC-----------------CEEEEeCCCCchHHHHHHHHHHCCCeE
Confidence 4578999999999988764 444 3679999865 55554444544544 12 44
Q ss_pred eeCCC--CHHHHHHHHHH
Q 003024 493 RVNPW--NIEATAEAMHE 508 (856)
Q Consensus 493 ~VnP~--d~~~~A~ai~~ 508 (856)
.++++ +.+.++++|++
T Consensus 299 ~~~~~~~~~~~l~~~l~~ 316 (318)
T PF13528_consen 299 VLSQEDLTPERLAEFLER 316 (318)
T ss_pred EcccccCCHHHHHHHHhc
Confidence 44444 45777777764
No 347
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=47.36 E-value=59 Score=36.47 Aligned_cols=112 Identities=12% Similarity=0.137 Sum_probs=74.3
Q ss_pred EEcCCCCHHHHHHHHHhcceeeecccc---ccC---CCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccC
Q 003024 416 FIDKPVTLSERAAYYTIAECVVVTAVR---DGM---NLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLS 489 (856)
Q Consensus 416 ~~~~~v~~~el~aly~~ADv~vvtS~~---EG~---nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 489 (856)
++..-.+...+...|+.-|+.+.=+.. ++. +.-..|+++| +|+++.+--.+.-.-+.
T Consensus 241 yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc-----------------~~~liT~~~~~~e~~f~ 303 (373)
T COG4641 241 YIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGC-----------------GGFLITDYWKDLEKFFK 303 (373)
T ss_pred hhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhc-----------------CCccccccHHHHHHhcC
Confidence 333333347777788888877654432 333 7889999999 45777776655444443
Q ss_pred -C-ceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh-hcCCHHHHHHHHHHHHHH
Q 003024 490 -G-AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV-STHDVAYWARSFFQDMER 546 (856)
Q Consensus 490 -~-al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 546 (856)
| .++| -.|..++.+.+...+.-+ +||++..+..++.| ..|+...-+..++..+..
T Consensus 304 pgk~~iv-~~d~kdl~~~~~yll~h~-~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~s 361 (373)
T COG4641 304 PGKDIIV-YQDSKDLKEKLKYLLNHP-DERKEIAECAYERVLARHTYEERIFKLLNEIAS 361 (373)
T ss_pred CchheEE-ecCHHHHHHHHHHHhcCc-chHHHHHHhhHHHHHHhccHHHHHHHHHHHHHH
Confidence 2 3333 568999999999999754 55555566655555 558888888777777765
No 348
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=44.82 E-value=33 Score=32.19 Aligned_cols=40 Identities=13% Similarity=0.306 Sum_probs=29.5
Q ss_pred HHHHHHcCCCCCEEEEeCccc-chHHHHHHhhcCCCeEEEEEc
Q 003024 191 QRVIEVINPEDDYVWIHDYHL-MVLPTFLRRRFTRLRMGFFLH 232 (856)
Q Consensus 191 ~~i~~~~~~~~D~VwihDyhl-~llp~~lr~~~~~~~i~~flH 232 (856)
.++++..+| |+|++|...- .+++.++++.....|+.+..|
T Consensus 67 ~k~ik~~~~--DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~h 107 (139)
T PF13477_consen 67 RKIIKKEKP--DVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVH 107 (139)
T ss_pred HHHhccCCC--CEEEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence 455666677 9999999875 566666655544489999999
No 349
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=44.25 E-value=4.8e+02 Score=29.59 Aligned_cols=91 Identities=20% Similarity=0.272 Sum_probs=56.2
Q ss_pred HHHHHHHHHhCCCCcCceEEEEEecCCC--CCchhHHHHHHHHHHHHHHHhccc-CCCCcccEEEEc-CCCCHHHHHHHH
Q 003024 355 LLAMEHLLKQHPKWQGRAVLVQIANPAR--GRGKDLEEIQAEIHATCKRINETF-GRPGYEPVVFID-KPVTLSERAAYY 430 (856)
Q Consensus 355 l~A~~~ll~~~p~~~~~vvLvqi~~p~r--~~~~~~~~l~~~~~~lv~~IN~~~-~~~~~~pvv~~~-~~v~~~el~aly 430 (856)
+.++|+-+.+ +++.|++.++|-. |+.-..++| .++.+++.+-|..- ...-+.|.++.. .+++..-+..-+
T Consensus 147 ~~~LE~~~~~-----~~vkl~iLCnPHNP~Grvwt~eeL-~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~ 220 (388)
T COG1168 147 FDALEKAFVD-----ERVKLFILCNPHNPTGRVWTKEEL-RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERF 220 (388)
T ss_pred HHHHHHHHhc-----CCccEEEEeCCCCCCCccccHHHH-HHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhh
Confidence 3455554432 2466888898854 444444455 46677777766543 334567777665 566766665554
Q ss_pred HhcceeeeccccccCCCcccce
Q 003024 431 TIAECVVVTAVRDGMNLTPYEY 452 (856)
Q Consensus 431 ~~ADv~vvtS~~EG~nLv~~Ea 452 (856)
+-.++.++|-.-+|||.-+..
T Consensus 221 -a~~~it~~saSKtFNlaGL~~ 241 (388)
T COG1168 221 -ADNSITLTSASKTFNLAGLKC 241 (388)
T ss_pred -hcceEEEeeccccccchhhhh
Confidence 344566777788888876663
No 350
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=43.21 E-value=68 Score=33.71 Aligned_cols=61 Identities=13% Similarity=0.212 Sum_probs=42.1
Q ss_pred CHHHHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecC-CChhhHHHhh
Q 003024 578 SIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSG-RGRDCLGKWF 646 (856)
Q Consensus 578 ~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TG-R~~~~l~~~~ 646 (856)
+..++++.|...-..+++.|+|||+-.. +.+.+.++++++..+.+|.+.-| |+.+++++++
T Consensus 31 dp~~~a~~~~~~~~~l~ivDldga~~g~--------~~n~~~i~~i~~~~~~pv~~gGGIrs~edv~~l~ 92 (228)
T PRK04128 31 DPVEIALRFSEYVDKIHVVDLDGAFEGK--------PKNLDVVKNIIRETGLKVQVGGGLRTYESIKDAY 92 (228)
T ss_pred CHHHHHHHHHHhCCEEEEEECcchhcCC--------cchHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHH
Confidence 6778888888765679999999999761 12355666665555555555444 6677888877
No 351
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=41.77 E-value=1.4e+02 Score=28.38 Aligned_cols=71 Identities=20% Similarity=0.286 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 003024 353 LKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI 432 (856)
Q Consensus 353 ~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ 432 (856)
..+.++..+.+++. +..+.||.|-..+|.. .+....+.+.++++..+|+ -||.++....+..+-...|..
T Consensus 35 ~~~~~l~~~i~~~~-----~~~iVvGlP~~~dG~~-~~~a~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~ 104 (130)
T TIGR00250 35 PDWSRIEELLKEWT-----PDKIVVGLPLNMDGTE-GPLTERAQKFANRLEGRFG----VPVVLWDERLSTVEAESGLFA 104 (130)
T ss_pred HHHHHHHHHHHHcC-----CCEEEEeccCCCCcCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHH
Confidence 45677777887764 4478899888766654 4556778888888888775 379999999998888877776
Q ss_pred c
Q 003024 433 A 433 (856)
Q Consensus 433 A 433 (856)
+
T Consensus 105 ~ 105 (130)
T TIGR00250 105 R 105 (130)
T ss_pred c
Confidence 3
No 352
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=41.40 E-value=38 Score=35.44 Aligned_cols=33 Identities=15% Similarity=0.087 Sum_probs=26.9
Q ss_pred HHHHHHhhhcCCCc-ceEEEEeCCchhHHHHHHcccc
Q 003024 763 EKIFTTMAESGRHA-DFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 763 ~~Ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
-..++.+ |-++ +.+++|.|+.+=+.+-.++|..
T Consensus 158 l~A~~~l---~~~~~~k~lVfeds~~Gv~aa~aagm~ 191 (222)
T KOG2914|consen 158 LKAAKRL---GVPPPSKCLVFEDSPVGVQAAKAAGMQ 191 (222)
T ss_pred HHHHHhc---CCCCccceEEECCCHHHHHHHHhcCCe
Confidence 3444555 6677 9999999999999999999973
No 353
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=40.54 E-value=2.3e+02 Score=27.27 Aligned_cols=71 Identities=18% Similarity=0.257 Sum_probs=50.7
Q ss_pred HHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q 003024 354 KLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTIA 433 (856)
Q Consensus 354 ~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~A 433 (856)
.+..+..+.++++ +..+.||.|...+|.. .+....+.+.++++..+|+ -||++++...+..+-...|..+
T Consensus 42 ~~~~l~~~i~~~~-----i~~iVvGlP~~~~G~~-~~~~~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~~ 111 (138)
T PRK00109 42 DWDRLEKLIKEWQ-----PDGLVVGLPLNMDGTE-GPRTERARKFANRLEGRFG----LPVVLVDERLSTVEAERALADV 111 (138)
T ss_pred HHHHHHHHHHHhC-----CCEEEEeccCCCCCCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHHc
Confidence 3566667777663 4578899887666544 4555677777777777764 3799999999988888777654
Q ss_pred c
Q 003024 434 E 434 (856)
Q Consensus 434 D 434 (856)
.
T Consensus 112 ~ 112 (138)
T PRK00109 112 G 112 (138)
T ss_pred C
Confidence 3
No 354
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=40.45 E-value=14 Score=36.86 Aligned_cols=36 Identities=25% Similarity=0.372 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHH
Q 003024 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFE 793 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~ 793 (856)
+|..+++.+...... +.+.+.++++|||.||++|++
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 699999999221111 456789999999999999996
No 355
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=40.02 E-value=67 Score=29.19 Aligned_cols=35 Identities=17% Similarity=0.321 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHH
Q 003024 352 DLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEE 390 (856)
Q Consensus 352 ~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~ 390 (856)
..|...++++++.+|+.+ +|.||..+..+..-|.+
T Consensus 49 ~~K~~~i~~i~~~fP~~k----fiLIGDsgq~DpeiY~~ 83 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERK----FILIGDSGQHDPEIYAE 83 (100)
T ss_pred hHHHHHHHHHHHHCCCCc----EEEEeeCCCcCHHHHHH
Confidence 588899999999999877 88888765555444433
No 356
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=38.42 E-value=3e+02 Score=34.43 Aligned_cols=136 Identities=16% Similarity=0.099 Sum_probs=83.3
Q ss_pred CCeEEEeccCccccCCHHH-HHHHHHHHHH--hCCCCc-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 003024 335 GKTVLLGVDDMDIFKGVDL-KLLAMEHLLK--QHPKWQ-GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPG 410 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi~~-~l~A~~~ll~--~~p~~~-~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~ 410 (856)
+...++.+-|+..-|-..+ .|..++++++ ++|+.. ..+++|..|-..-++... .++.+.+..+++.||..-.-.+
T Consensus 528 ~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIklI~~va~~in~Dp~v~~ 606 (798)
T PRK14985 528 QAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLA-KNIIFAINKVAEVINNDPLVGD 606 (798)
T ss_pred hhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHH-HHHHHHHHHHHHHhcCChhhCC
Confidence 4456788999999998877 7666665543 456532 346666666544333222 4566788888888886543334
Q ss_pred cccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc
Q 003024 411 YEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL 488 (856)
Q Consensus 411 ~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (856)
.-.|+|+. ...-.--..++.+|||-..+|+ .++|| |+.++-++ --.|++-+|..-|+-.++
T Consensus 607 ~lkVVFle-nY~VslAe~lipaaDvseqis~------ag~EA--SGTsnMK~--------amNGaLtlgtlDGanvEi 667 (798)
T PRK14985 607 KLKVVFLP-DYCVSAAELLIPAADISEQIST------AGKEA--SGTGNMKL--------ALNGALTVGTLDGANVEI 667 (798)
T ss_pred ceeEEEeC-CCChHHHHHHhhhhhhhhhCCC------CCccc--cCcchhHH--------HhcCceeeecccchHHHH
Confidence 44577776 3444455568899999777765 45553 33322111 114678887777765444
No 357
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=37.62 E-value=35 Score=36.03 Aligned_cols=37 Identities=16% Similarity=0.177 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhhhcCCCcceEEEEeCC-chhHHHHHHcccc
Q 003024 759 GVVAEKIFTTMAESGRHADFVLCIGDD-RSDEDMFEIIGNA 798 (856)
Q Consensus 759 G~al~~Ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~ 798 (856)
...-+..++++ +..|++++.|||+ .||+.--+.+|..
T Consensus 171 p~If~~al~~l---~v~Pee~vhIgD~l~nD~~gA~~~G~~ 208 (237)
T KOG3085|consen 171 PRIFQLALERL---GVKPEECVHIGDLLENDYEGARNLGWH 208 (237)
T ss_pred hHHHHHHHHHh---CCChHHeEEecCccccccHhHHHcCCE
Confidence 34556777888 9999999999998 5999999999973
No 358
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=36.44 E-value=40 Score=33.51 Aligned_cols=52 Identities=15% Similarity=0.097 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCc-hhHHHHHHccccccCCCCCCCccEEEEEeCCCccccceE
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDR-SDEDMFEIIGNATSSGVLSSNASVFACTVGQKPSKAKYY 825 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~A~y~ 825 (856)
=+.++++.++.| ++++++|+++||.. +|+---..+| ++++-|-.-.....++
T Consensus 95 ~~~~fr~Al~~m---~l~~~~vvmVGDqL~TDVlggnr~G-------------~~tIlV~Pl~~~d~~~ 147 (175)
T COG2179 95 FGRAFRRALKEM---NLPPEEVVMVGDQLFTDVLGGNRAG-------------MRTILVEPLVAPDGWI 147 (175)
T ss_pred cHHHHHHHHHHc---CCChhHEEEEcchhhhhhhcccccC-------------cEEEEEEEeccccchh
Confidence 477899999999 99999999999984 7765444443 3678776543333344
No 359
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=36.30 E-value=57 Score=34.54 Aligned_cols=29 Identities=14% Similarity=0.084 Sum_probs=23.9
Q ss_pred EEEEeCCchhHHHHHHccccccCCCCCCCccEEEEEeCCC
Q 003024 779 VLCIGDDRSDEDMFEIIGNATSSGVLSSNASVFACTVGQK 818 (856)
Q Consensus 779 vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 818 (856)
+++|||+.+|+.+.+.+|.. .+.|..|..
T Consensus 187 ~I~IGDs~~Di~aA~~AGi~-----------~I~v~~G~~ 215 (237)
T PRK11009 187 RIFYGDSDNDITAAREAGAR-----------GIRILRAAN 215 (237)
T ss_pred eEEEcCCHHHHHHHHHcCCc-----------EEEEecCCC
Confidence 89999999999999999974 356777643
No 360
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=35.40 E-value=3.1e+02 Score=29.58 Aligned_cols=51 Identities=20% Similarity=0.360 Sum_probs=35.6
Q ss_pred CEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHH
Q 003024 202 DYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNADLIGFHTFDYAR 269 (856)
Q Consensus 202 D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~ 269 (856)
|+|.--...-.++..+|++++-+.++.--+| |. +|.+ ..|+|..--+|+.+
T Consensus 72 dl~I~aGrrta~l~~~lkk~~~~~~vVqI~~---Pr------lp~~--------~fDlvivp~HD~~~ 122 (329)
T COG3660 72 DLIITAGRRTAPLAFYLKKKFGGIKVVQIQD---PR------LPYN--------HFDLVIVPYHDWRE 122 (329)
T ss_pred ceEEecccchhHHHHHHHHhcCCceEEEeeC---CC------CCcc--------cceEEeccchhhhh
Confidence 8888899999999999999998866655554 42 3433 25776655555554
No 361
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=35.13 E-value=3.4 Score=50.50 Aligned_cols=52 Identities=19% Similarity=0.139 Sum_probs=34.8
Q ss_pred cCeEEEEEeC-CCCHHHHHHHHHHHhhhcC--CCcceEEEEeCCchhHHHHHHcc
Q 003024 745 GQFIVEVKPQ-GVSKGVVAEKIFTTMAESG--RHADFVLCIGDDRSDEDMFEIIG 796 (856)
Q Consensus 745 g~~~vEI~p~-gvsKG~al~~Ll~~l~~~g--i~~d~vlaiGD~~ND~~Mf~~ag 796 (856)
+....|+.|. .+.||.++..+.......+ -..=...++||+..|++-+..++
T Consensus 369 ~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~aivvn 423 (732)
T KOG1050|consen 369 LYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDAAIVVN 423 (732)
T ss_pred hHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccccccCEEEC
Confidence 3445666664 6789999888877764444 22224567899999977666654
No 362
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=33.59 E-value=47 Score=39.22 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 758 KGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 758 KG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
|-..++ +.+ |.+... ++.||+.||.+||+.++..
T Consensus 177 Kv~rl~---~~~---g~~~~~-~aYgDS~sD~plL~~a~e~ 210 (497)
T PLN02177 177 KRDAVL---KEF---GDALPD-LGLGDRETDHDFMSICKEG 210 (497)
T ss_pred HHHHHH---HHh---CCCCce-EEEECCccHHHHHHhCCcc
Confidence 666665 333 444334 8999999999999999863
No 363
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=33.01 E-value=3.9e+02 Score=33.17 Aligned_cols=130 Identities=16% Similarity=0.160 Sum_probs=82.6
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHhCC-CCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003024 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHP-KWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEP 413 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p-~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~p 413 (856)
+..+++.+-|+..-|-..+.+.=..++...-- ++..++.++..|-..-++... .++.+.+...++.||.+- .
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~a-K~iIk~I~~~a~~in~~l------k 558 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAA-KEIIKLINDVADVINNKL------K 558 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHH-HHHHHHHHHHHHhhcccc------e
Confidence 46788999999999988877776666655433 555567666555433223222 456778888888888732 3
Q ss_pred EEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc
Q 003024 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL 488 (856)
Q Consensus 414 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (856)
|+|+.. .+-.--..++.+|||=..+|+ .++|| |+.++-|+ -=.|.+-+|..-|+-.++
T Consensus 559 VvFl~n-YdvslA~~iipa~Dvweqis~------a~~EA--SGTsnMK~--------alNGaltigtlDGanvEi 616 (750)
T COG0058 559 VVFLPN-YDVSLAELLIPAADVWEQIPT------AGKEA--SGTSNMKA--------ALNGALTLGTLDGANVEI 616 (750)
T ss_pred EEEeCC-CChhHHHhhcccccccccCCC------CCccc--cCcCcchH--------HhcCCceeeccccHHHHH
Confidence 666653 333334457889999777775 45663 44433221 114678888888876555
No 364
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=31.76 E-value=6.2e+02 Score=26.45 Aligned_cols=155 Identities=20% Similarity=0.328 Sum_probs=88.6
Q ss_pred CCChHHHhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEEEeecccCchHHH
Q 003024 235 FPSSEIYRTLPVREEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIE 314 (856)
Q Consensus 235 fP~~e~~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~i~p~GId~~~~~ 314 (856)
||.+++||..- +..|++-|-.-|-|-|.|+.-+-|-|. ..|+--+- -..+.++| |++.+.+.
T Consensus 33 fpDydvfrAfT-S~kIIkkLK~rdgi~~dTP~~aL~klk------------~~gy~evi----iQ~lhiIp-G~EyEklv 94 (265)
T COG4822 33 FPDYDVFRAFT-SRKIIKKLKERDGIDFDTPIQALNKLK------------DQGYEEVI----IQPLHIIP-GIEYEKLV 94 (265)
T ss_pred CccHHHHHHHh-HHHHHHHHHhhcCcccCCHHHHHHHHH------------Hccchhee----eeeeeecC-chHHHHHH
Confidence 88899998754 456888888889999999987766554 11210010 01344455 88776654
Q ss_pred HHhcCchHHHHHHHHHHHc----CCCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHH
Q 003024 315 SVLRLADKDWRVQELKQQF----EGKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEE 390 (856)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~~----~~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~ 390 (856)
..++.++..| -|++++-+.+ .-. .+++.+..+.|.++.+=.+|..|-++.. +....
T Consensus 95 ---------r~V~~~~~dF~~lkig~PlLy~k~------DYe---~~v~aik~~~ppl~k~e~~vlmgHGt~h--~s~~~ 154 (265)
T COG4822 95 ---------REVNKYSNDFKRLKIGRPLLYYKN------DYE---ICVEAIKDQIPPLNKDEILVLMGHGTDH--HSNAA 154 (265)
T ss_pred ---------HHHHHHhhhhheeecCCceeechh------hHH---HHHHHHHHhcCCcCcCeEEEEEecCCCc--cHHHH
Confidence 2344555555 2555554443 222 3455566788988776666767654422 22111
Q ss_pred HHHHHHHHHHHHhcccCCCCcccEEE--EcCCCCHHHHHHHHHhcce
Q 003024 391 IQAEIHATCKRINETFGRPGYEPVVF--IDKPVTLSERAAYYTIAEC 435 (856)
Q Consensus 391 l~~~~~~lv~~IN~~~~~~~~~pvv~--~~~~v~~~el~aly~~ADv 435 (856)
-.-+...... .++.||.. ..+.-..+.+..+++..-+
T Consensus 155 -YacLd~~~~~-------~~f~~v~v~~ve~yP~~d~vi~~l~~~~~ 193 (265)
T COG4822 155 -YACLDHVLDE-------YGFDNVFVAAVEGYPLVDTVIEYLRKNGI 193 (265)
T ss_pred -HHHHHHHHHh-------cCCCceEEEEecCCCcHHHHHHHHHHcCC
Confidence 1222222221 25556554 3455556788888888765
No 365
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=30.66 E-value=1e+02 Score=30.26 Aligned_cols=40 Identities=15% Similarity=0.150 Sum_probs=31.2
Q ss_pred CHHHHHHHHHHHhhhcCCCcceEEEEeCCchhHHHHHHcccc
Q 003024 757 SKGVVAEKIFTTMAESGRHADFVLCIGDDRSDEDMFEIIGNA 798 (856)
Q Consensus 757 sKG~al~~Ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (856)
=|...++.|.+.+.. ....++++|||..+|..+.+.+|..
T Consensus 102 ~K~~~l~~i~~~~~~--~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 102 FKIACLRDIKSLFPP--QGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHHHHHhcCC--CCCCEEEEeCCCchhHHHHHHcCCC
Confidence 377888888876521 2346788899999999999999974
No 366
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=30.32 E-value=7.1e+02 Score=26.73 Aligned_cols=182 Identities=22% Similarity=0.290 Sum_probs=87.3
Q ss_pred hHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccchHHHHHHhhcCCCeEEEEEccCCCChHHHhcCCchHHHHHH--
Q 003024 176 RSLWEAYVSANKIFSQRVIEVINPEDDYVWIHDYHLMVLPTFLRRRFTRLRMGFFLHSPFPSSEIYRTLPVREEILKA-- 253 (856)
Q Consensus 176 ~~~w~~Y~~vN~~fa~~i~~~~~~~~D~VwihDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~-- 253 (856)
+..|+.-.++ .++|.+..+. -|+|-|--||-= .|+||-..-.-.+.-.-.||-.+
T Consensus 46 ~~E~erl~~~----r~~i~~~ak~-a~VitISHYHYD------------------HhtPf~~~~y~~s~e~~~eiY~gK~ 102 (304)
T COG2248 46 QRELERLRQA----REKIQRYAKK-ADVITISHYHYD------------------HHTPFFDGIYEASGETAKEIYKGKL 102 (304)
T ss_pred HHHHHHHHHH----HHHHHHHHhh-CCEEEEeeeccc------------------cCCccccchhhhcccchHHHhcCcE
Confidence 4445554433 3445555443 489999989843 67776432222222222333332
Q ss_pred hHhC---CEEcccCHHHHHHHHHHHHhhhCceecccCceeeEEECCEEEEEE-EeecccCchHHHHHhcCchHHHHHHHH
Q 003024 254 LLNA---DLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIK-IMPVGIHMGQIESVLRLADKDWRVQEL 329 (856)
Q Consensus 254 ll~~---dligf~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~-i~p~GId~~~~~~~~~~~~~~~~~~~l 329 (856)
+|-- +-|--....-+..||.....+ +.+....+|. ..++++-.+... .+|-|-|=.++--+...
T Consensus 103 lLlKhPte~IN~SQ~~Ra~~fl~~~~~~-~~~ie~ADgk-~f~fG~t~IefS~pvpHG~eGskLGyVl~v---------- 170 (304)
T COG2248 103 LLLKHPTENINRSQRRRAYRFLESLKDI-AREIEYADGK-TFEFGGTVIEFSPPVPHGREGSKLGYVLMV---------- 170 (304)
T ss_pred EEecCchhhhCHHHHHHHHHHHHHhhhh-cceeEecCCc-eEEeCCEEEEecCCCCCCCcccccceEEEE----------
Confidence 0000 001111123355677766544 4444444432 355544443321 23445443222111100
Q ss_pred HHHcCCCeEEEeccCcc-ccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCC-C----Cc-hhHHHHHHHHHHHHHHH
Q 003024 330 KQQFEGKTVLLGVDDMD-IFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPAR-G----RG-KDLEEIQAEIHATCKRI 402 (856)
Q Consensus 330 ~~~~~~k~iil~VdRld-~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r-~----~~-~~~~~l~~~~~~lv~~I 402 (856)
.--.|+..|++..+.. +.++ .|.+-++++.|+ +++|+.|.- - -+ ...+.-.+.++.++++-
T Consensus 171 -~V~dg~~~i~faSDvqGp~~~-----~~l~~i~e~~P~------v~ii~GPpty~lg~r~~~~~~E~~irNl~~ii~~~ 238 (304)
T COG2248 171 -AVTDGKSSIVFASDVQGPIND-----EALEFILEKRPD------VLIIGGPPTYLLGYRVGPKSLEKGIRNLERIIEET 238 (304)
T ss_pred -EEecCCeEEEEcccccCCCcc-----HHHHHHHhcCCC------EEEecCCchhHhhhhcChHHHHHHHHHHHHHHHhC
Confidence 0014677788888776 5555 567778999997 455665541 0 11 23334445666777765
Q ss_pred hc
Q 003024 403 NE 404 (856)
Q Consensus 403 N~ 404 (856)
|.
T Consensus 239 ~~ 240 (304)
T COG2248 239 NA 240 (304)
T ss_pred cc
Confidence 54
No 367
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=29.86 E-value=5e+02 Score=30.78 Aligned_cols=127 Identities=13% Similarity=0.036 Sum_probs=72.9
Q ss_pred CeEEEeccCccccC-CHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003024 336 KTVLLGVDDMDIFK-GVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPV 414 (856)
Q Consensus 336 k~iil~VdRld~~K-Gi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pv 414 (856)
..|+++-|-+...+ .-..+++++-..+++.|. + +++...... . . .+..+-
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~-~---viw~~~~~~----~------~---------------~~~p~N 347 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPY-N---VLWKYDGEV----E------A---------------INLPAN 347 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCC-e---EEEEECCCc----C------c---------------ccCCCc
Confidence 36778888765543 335677777777776662 2 223222100 0 0 011224
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcc----ccccc--
Q 003024 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIG----CSPSL-- 488 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l-- 488 (856)
+++.+.+|+.++.+- ..+++||- +-|+ ....||+.++. |+|+--+.+ .+..+
T Consensus 348 v~i~~w~Pq~~lL~h-p~v~~fIt---HGG~-~s~~Eal~~Gv-----------------P~v~iP~~~DQ~~Na~rv~~ 405 (507)
T PHA03392 348 VLTQKWFPQRAVLKH-KNVKAFVT---QGGV-QSTDEAIDALV-----------------PMVGLPMMGDQFYNTNKYVE 405 (507)
T ss_pred eEEecCCCHHHHhcC-CCCCEEEe---cCCc-ccHHHHHHcCC-----------------CEEECCCCccHHHHHHHHHH
Confidence 456678888776542 45667662 4564 56789999855 666554333 11111
Q ss_pred -CCceeeCC--CCHHHHHHHHHHHHcCC
Q 003024 489 -SGAIRVNP--WNIEATAEAMHEAIQMN 513 (856)
Q Consensus 489 -~~al~VnP--~d~~~~A~ai~~aL~m~ 513 (856)
+-|+.+++ .+.+++++||.++|+.+
T Consensus 406 ~G~G~~l~~~~~t~~~l~~ai~~vl~~~ 433 (507)
T PHA03392 406 LGIGRALDTVTVSAAQLVLAIVDVIENP 433 (507)
T ss_pred cCcEEEeccCCcCHHHHHHHHHHHhCCH
Confidence 22666654 46799999999999753
No 368
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=29.33 E-value=3.1e+02 Score=30.87 Aligned_cols=155 Identities=17% Similarity=0.163 Sum_probs=102.8
Q ss_pred CCeEEEeccCccccCCHHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhc-ccCCCCccc
Q 003024 335 GKTVLLGVDDMDIFKGVDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINE-TFGRPGYEP 413 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~-~~~~~~~~p 413 (856)
++++-++=--++-.|.=..=+.+-|+.-+..|+.. ..+.|++.-. .++- .+....+.+++. +.|
T Consensus 189 ~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v---~~~~V~Nt~~--~ke~----~~F~~f~~~ldlvr~g------ 253 (364)
T PF10933_consen 189 GKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAV---EHVYVTNTYH--LKEH----PTFVNFANSLDLVRDG------ 253 (364)
T ss_pred CceEEEecCCceEEeecCccHHHHHHHHHhChhhc---ceEEEecchh--hhcC----HHHHHHHHhhHHhhcC------
Confidence 46666776777777777777788888889999864 4666776432 1222 233333444443 333
Q ss_pred EEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccccCC-ce
Q 003024 414 VVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSLSG-AI 492 (856)
Q Consensus 414 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~-al 492 (856)
+-.|.+..+..+..+=| +|++|.-----|+|-..+|++..+- |||- -|+.|.+ |+
T Consensus 254 kasfegR~~~p~fla~~--tD~VvSHqWeN~lNYlY~daLyggY-----------------PLVH-----NS~~l~d~GY 309 (364)
T PF10933_consen 254 KASFEGRFDFPDFLAQH--TDAVVSHQWENPLNYLYYDALYGGY-----------------PLVH-----NSPLLKDVGY 309 (364)
T ss_pred eeEEeeecChHHHHHhC--CCEEEeccccchhhHHHHHHHhcCC-----------------Cccc-----CcchhcccCc
Confidence 33466666777766665 6998887788999999999998633 7775 3456644 88
Q ss_pred eeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhh
Q 003024 493 RVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYV 528 (856)
Q Consensus 493 ~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 528 (856)
.-+-.|..+=|++|.+|+..-+..-..-.++.++++
T Consensus 310 YY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l 345 (364)
T PF10933_consen 310 YYPDFDAFEGARQLLRAIREHDADLDAYRARARRLL 345 (364)
T ss_pred CCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHH
Confidence 888899999999999999755544333333334433
No 369
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=27.42 E-value=1.2e+03 Score=28.64 Aligned_cols=176 Identities=14% Similarity=0.092 Sum_probs=99.5
Q ss_pred CCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc----C-----
Q 003024 419 KPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL----S----- 489 (856)
Q Consensus 419 ~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l----~----- 489 (856)
+..+.+....+++.-+++++|.-|+-.=+.++|+-..+ ++-+.+|++...-.++.+ .
T Consensus 232 gAm~~~~~~~~l~~~~lVIt~gdR~Di~l~al~~~~~~--------------~~~a~lIlTgg~~~~~~v~~l~~~a~~~ 297 (684)
T PRK05632 232 CARSIPNMLEHLKPGSLVVTPGDRSDVILAALLAAMNG--------------PPIAGLLLTGGYEPDPRIAKLCEGAFET 297 (684)
T ss_pred EecchHHHHHhccCCcEEEeCCChHHHHHHHHHhcccC--------------CCceEEEEcCCCCCCHHHHHHHhhcccC
Confidence 44566677777777677676677665555666652110 012245555433333322 1
Q ss_pred C-ceeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcC-CHHHHHHHHHHHHHHHHHhhccccccccCcccceeE
Q 003024 490 G-AIRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTH-DVAYWARSFFQDMERTCKDHFKRRCWGIGLSFGFRV 567 (856)
Q Consensus 490 ~-al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~-~~~~W~~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~ 567 (856)
+ .++.-|+|+-++|..|.++..--..+-..+.+...+.+.+| |..+|.+. +. + ... |.
T Consensus 298 ~ipVl~t~~dT~~ta~~i~~~~~~i~~~d~~ki~~~~~~~~~~vD~~~l~~~-l~-~---~~~---------------~~ 357 (684)
T PRK05632 298 GLPVLSVDTNTYQTALRLQSFNGEVPVDDHERIETVLELVASHVDTDELLER-LT-A---TSE---------------RS 357 (684)
T ss_pred CCCEEEecCCHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCHHHHHHH-hc-c---CCC---------------CC
Confidence 2 36678999999999999765422112223455667777777 87777764 22 1 000 01
Q ss_pred eecCcccccCCHHHHHHHHHcCCcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhh
Q 003024 568 VALDPNFRKLSIDAIVSAYLRSKSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWF 646 (856)
Q Consensus 568 ~~~~~~f~~l~~~~i~~~y~~s~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~ 646 (856)
..++|. .-...+.+.-+..++|+++-.= -.++++++... +.+.|+.-.+.-|+.. .+++.+
T Consensus 358 ~~~~p~---~~~~~l~~~a~~~~~~i~~~e~-------------~d~~~l~Aa~~-~~~~g~~~~iLvG~~~-~I~~~~ 418 (684)
T PRK05632 358 RRLSPP---AFRYQLTERARAAKKRIVLPEG-------------DEPRTLKAAAI-CLERGIADCVLLGNPE-EIRRVA 418 (684)
T ss_pred CCcCHH---HHHHHHHHHHhcCCCEEEEeCC-------------CCHHHHHHHHH-HHHcCCceEEEECCHH-HHHHHH
Confidence 123442 1244566665666666665321 25788888888 4777887667778764 455544
No 370
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=27.18 E-value=1.9e+02 Score=30.41 Aligned_cols=61 Identities=18% Similarity=0.254 Sum_probs=44.3
Q ss_pred CHHHHHHHHHc-C-CcEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHhhCCCeEEEecC-CChhhHHHhh
Q 003024 578 SIDAIVSAYLR-S-KSRAILFDYDGTVMPQTSINKAPSQAVISIINTLCNDARNTVFVVSG-RGRDCLGKWF 646 (856)
Q Consensus 578 ~~~~i~~~y~~-s-~~rlI~~DlDGTLl~~~~~~~~~s~~~~~aL~~L~~d~g~~V~I~TG-R~~~~l~~~~ 646 (856)
+...+++.|.. . -..+.++|+||+.-. .+.+.+.++++++..+.+|.+--| |+.+.+++++
T Consensus 32 dp~~~a~~~~~~~Ga~~l~ivDLd~a~~~--------~~~n~~~I~~i~~~~~~pi~vGGGIrs~e~v~~~l 95 (234)
T PRK13587 32 SAEESIAYYSQFECVNRIHIVDLIGAKAQ--------HAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYF 95 (234)
T ss_pred CHHHHHHHHHhccCCCEEEEEECcccccC--------CcchHHHHHHHHhhcCCeEEEcCCcCCHHHHHHHH
Confidence 55678888988 4 489999999998654 234567777776666667666555 6777888887
No 371
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=26.63 E-value=74 Score=35.00 Aligned_cols=66 Identities=18% Similarity=0.122 Sum_probs=42.8
Q ss_pred HHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc--------CC-ceee
Q 003024 424 SERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL--------SG-AIRV 494 (856)
Q Consensus 424 ~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--------~~-al~V 494 (856)
+++.++|..||++|..+ |++ +..|+++++. |+|+.-+.|-.++. .| |+.+
T Consensus 239 ~~~~~~l~~ad~vI~~~---G~~-t~~Ea~~~g~-----------------P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 239 DNFKELIKNAELVITHG---GFS-LISEALSLGK-----------------PLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred HHHHHHHHhCCEEEECC---ChH-HHHHHHHcCC-----------------CEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 68999999999999876 554 5889999965 67776665543432 12 5566
Q ss_pred CCCCHHHHHHHHHHHHc
Q 003024 495 NPWNIEATAEAMHEAIQ 511 (856)
Q Consensus 495 nP~d~~~~A~ai~~aL~ 511 (856)
+..+. ++.+++...++
T Consensus 298 ~~~~~-~~~~~~~~~~~ 313 (321)
T TIGR00661 298 EYKEL-RLLEAILDIRN 313 (321)
T ss_pred ChhhH-HHHHHHHhccc
Confidence 65555 33334444333
No 372
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=26.35 E-value=4.8e+02 Score=31.56 Aligned_cols=85 Identities=19% Similarity=0.206 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHhCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEE-EEcCCCCHHHHHHH
Q 003024 351 VDLKLLAMEHLLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVV-FIDKPVTLSERAAY 429 (856)
Q Consensus 351 i~~~l~A~~~ll~~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv-~~~~~v~~~el~al 429 (856)
-+..|.-+.++|++-|+-+ |+...-|.-++ +..+..++++ |.+|-. .|..-...+|=..-
T Consensus 772 dP~~l~~W~~ILk~VPnS~----LwllrfPa~ge----~rf~ty~~~~-----------Gl~p~riifs~va~k~eHvrr 832 (966)
T KOG4626|consen 772 DPSTLQMWANILKRVPNSV----LWLLRFPAVGE----QRFRTYAEQL-----------GLEPDRIIFSPVAAKEEHVRR 832 (966)
T ss_pred CHHHHHHHHHHHHhCCcce----eEEEeccccch----HHHHHHHHHh-----------CCCccceeeccccchHHHHHh
Confidence 3567899999999999765 77777777544 3334444333 444432 33434456777788
Q ss_pred HHhcceeeeccccccCCCcccceeee
Q 003024 430 YTIAECVVVTAVRDGMNLTPYEYIVC 455 (856)
Q Consensus 430 y~~ADv~vvtS~~EG~nLv~~Ea~a~ 455 (856)
+..||||+-|++.-|- .+-.|-+.+
T Consensus 833 ~~LaDv~LDTplcnGh-TTg~dvLw~ 857 (966)
T KOG4626|consen 833 GQLADVCLDTPLCNGH-TTGMDVLWA 857 (966)
T ss_pred hhhhhhcccCcCcCCc-ccchhhhcc
Confidence 9999999999998775 344455555
No 373
>cd03309 CmuC_like CmuC_like. Proteins similar to the putative corrinoid methyltransferase CmuC. Its function has been inferred from sequence similarity to the methyltransferases CmuA and MtaA. Mutants of Methylobacterium sp. disrupted in cmuC and purU appear deficient in some step of chloromethane metabolism.
Probab=26.02 E-value=6.2e+02 Score=28.05 Aligned_cols=27 Identities=26% Similarity=0.407 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCEEEEeC
Q 003024 180 EAYVSANKIFSQRVIEVINPEDDYVWIHD 208 (856)
Q Consensus 180 ~~Y~~vN~~fa~~i~~~~~~~~D~VwihD 208 (856)
+.-..++..|+++.++.+.. |+|++||
T Consensus 151 d~ltd~~i~y~~~qiea~Ga--d~I~i~D 177 (321)
T cd03309 151 DYLTDAKLKLYERRIKHLEP--DLLVYHD 177 (321)
T ss_pred HHHHHHHHHHHHHHHHHhCC--CEEEEeC
Confidence 34455667777777776544 8999988
No 374
>PRK14057 epimerase; Provisional
Probab=26.01 E-value=4.7e+02 Score=28.03 Aligned_cols=66 Identities=12% Similarity=0.190 Sum_probs=44.9
Q ss_pred eEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh-cceeeeccc
Q 003024 372 AVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI-AECVVVTAV 441 (856)
Q Consensus 372 vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~-ADv~vvtS~ 441 (856)
.+||+-.+|..+..+-.++..+.+.++.+.+..+ ++.-.+...|.++.+.+..+..+ ||++|.-|.
T Consensus 157 ~VLvMtV~PGfgGQ~Fi~~~l~KI~~lr~~~~~~----~~~~~IeVDGGI~~~ti~~l~~aGad~~V~GSa 223 (254)
T PRK14057 157 VIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGDK----REGKIIVIDGSLTQDQLPSLIAQGIDRVVSGSA 223 (254)
T ss_pred EEEEEEECCCCCchhccHHHHHHHHHHHHHHHhc----CCCceEEEECCCCHHHHHHHHHCCCCEEEEChH
Confidence 6688888887665444445555666655555432 34446678999999988887764 899988763
No 375
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=25.67 E-value=1.3e+02 Score=30.05 Aligned_cols=79 Identities=18% Similarity=0.218 Sum_probs=45.9
Q ss_pred CCEEEEeCcc-cchHHHHHHhhcCCCeEEEEEcc---CCCChHH-HhcCCchHHHHHHhHhCCEEcccCHHHHHHHHHHH
Q 003024 201 DDYVWIHDYH-LMVLPTFLRRRFTRLRMGFFLHS---PFPSSEI-YRTLPVREEILKALLNADLIGFHTFDYARHFLSCC 275 (856)
Q Consensus 201 ~D~VwihDyh-l~llp~~lr~~~~~~~i~~flH~---PfP~~e~-~~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~ 275 (856)
.|+|..-|.= |.-+-++.+ ....+|....+|= -+|-++. -|.+-..--=+-+.|.||.|-|.+.-..+.||+.+
T Consensus 60 ~dll~aTsmldLa~l~gL~p-~l~~~p~ilYFHENQl~YP~~~~~~rd~~~~~~ni~saLaAD~v~FNS~~nr~sFL~~~ 138 (168)
T PF12038_consen 60 YDLLFATSMLDLATLRGLRP-DLANVPKILYFHENQLAYPVSPGQERDFQYGMNNIYSALAADRVVFNSAFNRDSFLDGI 138 (168)
T ss_pred CCEEEeeccccHHHHHhhcc-CCCCCCEEEEEecCcccCCCCCCccccccHHHHHHHHHHhceeeeecchhhHHHHHHHH
Confidence 3788887643 333333333 3445666666661 1232220 00000110114567899999999999999999999
Q ss_pred HhhhC
Q 003024 276 SRMLG 280 (856)
Q Consensus 276 ~r~lg 280 (856)
..+|.
T Consensus 139 ~~fL~ 143 (168)
T PF12038_consen 139 PSFLK 143 (168)
T ss_pred HHHHH
Confidence 99875
No 376
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=25.35 E-value=75 Score=32.17 Aligned_cols=46 Identities=24% Similarity=0.325 Sum_probs=35.3
Q ss_pred cEEEEEecCCCCCCCCC-C-----CCCCCHHHHHHHHHHHhhCCCeEEEecCC
Q 003024 591 SRAILFDYDGTVMPQTS-I-----NKAPSQAVISIINTLCNDARNTVFVVSGR 637 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~-~-----~~~~s~~~~~aL~~L~~d~g~~V~I~TGR 637 (856)
.++||+|-||||.-..+ . +-..-+.++.+|.+| ++.|..++++|--
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l-~~~gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKL-QRAGYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHH-HhCCCeEEEEECC
Confidence 68999999999996322 1 112457888999998 7889999999854
No 377
>KOG2670 consensus Enolase [Carbohydrate transport and metabolism]
Probab=25.30 E-value=55 Score=35.74 Aligned_cols=41 Identities=32% Similarity=0.625 Sum_probs=31.3
Q ss_pred eCChhhhhhHhhccccccccccccccCCCCCCCCCCcChHhHHHHHHHHHH
Q 003024 138 FLPPDILTKFYHGFCKQHLWPLFHYMLPFSATHGGRFDRSLWEAYVSANKI 188 (856)
Q Consensus 138 ~l~~~~~~~~y~gf~~~~lWpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~ 188 (856)
|++.+.+-..|+.|+|. +|+ +.+. ..|++++|++|...+..
T Consensus 272 ~~s~~~L~dlY~~~~k~--yPi--vSiE------DPFdqdDw~~w~~~~~~ 312 (433)
T KOG2670|consen 272 WLSGDQLADLYKSFIKD--YPI--VSIE------DPFDQDDWEAWSKFFKE 312 (433)
T ss_pred ccCHHHHHHHHHHHHhc--CCe--eeec------CCcchhhHHHHHHHhhc
Confidence 58889999999999998 455 2221 46999999999876653
No 378
>KOG0331 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=25.04 E-value=3.7e+02 Score=31.84 Aligned_cols=94 Identities=17% Similarity=0.214 Sum_probs=66.7
Q ss_pred EEeccCccccCCHHHHHHHHHHHHH-hCCCCcCceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEE
Q 003024 339 LLGVDDMDIFKGVDLKLLAMEHLLK-QHPKWQGRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFI 417 (856)
Q Consensus 339 il~VdRld~~KGi~~~l~A~~~ll~-~~p~~~~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~ 417 (856)
++++.+----|-+..+|-|+.++.+ ++..-+++---+.|-.|+ .||..++++.+.++-...+ ..-+.+.
T Consensus 131 ~v~iA~TGSGKTLay~lP~i~~l~~~~~~~~~~~~P~vLVL~PT-------RELA~QV~~~~~~~~~~~~---~~~~cvy 200 (519)
T KOG0331|consen 131 LVGIARTGSGKTLAYLLPAIVHLNNEQGKLSRGDGPIVLVLAPT-------RELAVQVQAEAREFGKSLR---LRSTCVY 200 (519)
T ss_pred eEEEeccCCcchhhhhhHHHHHHHhccccccCCCCCeEEEEcCc-------HHHHHHHHHHHHHHcCCCC---ccEEEEe
Confidence 7789999999999999999999987 343334333233344576 4788888888777766553 2234444
Q ss_pred cCCCCHHHHHHHHHhcceeeecccc
Q 003024 418 DKPVTLSERAAYYTIAECVVVTAVR 442 (856)
Q Consensus 418 ~~~v~~~el~aly~~ADv~vvtS~~ 442 (856)
.|.--..++..+-+.+||+|-|+-|
T Consensus 201 GG~~~~~Q~~~l~~gvdiviaTPGR 225 (519)
T KOG0331|consen 201 GGAPKGPQLRDLERGVDVVIATPGR 225 (519)
T ss_pred CCCCccHHHHHHhcCCcEEEeCChH
Confidence 4444467899999999999999854
No 379
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=24.65 E-value=4.3e+02 Score=33.04 Aligned_cols=136 Identities=14% Similarity=0.072 Sum_probs=82.1
Q ss_pred CCeEEEeccCccccCCHHH-HHHHHHHHHH--hCCCCc-CceEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 003024 335 GKTVLLGVDDMDIFKGVDL-KLLAMEHLLK--QHPKWQ-GRAVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPG 410 (856)
Q Consensus 335 ~k~iil~VdRld~~KGi~~-~l~A~~~ll~--~~p~~~-~~vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~ 410 (856)
+...++.+-|+..-|-..+ .|..++++.+ ++|+.. ..+++|..|-..-++... .++.+.+..+++.||..-.-.+
T Consensus 526 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIklI~~va~~iN~Dp~v~~ 604 (794)
T TIGR02093 526 NSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMA-KLIIKLINSVAEVVNNDPAVGD 604 (794)
T ss_pred cccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHH-HHHHHHHHHHHHHhccChhhCC
Confidence 4457788999999998877 6666665533 455431 245666666544333322 4567788888888887644344
Q ss_pred cccEEEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCccccccc
Q 003024 411 YEPVVFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPSL 488 (856)
Q Consensus 411 ~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (856)
.-.|+|+.. ..-.--..++.+|||-..+|+ .++|| |+.++-++ --.|.+-+|..-|+-.++
T Consensus 605 ~lkVVFlen-Y~VslAe~iipaaDvseqist------ag~EA--SGTsnMK~--------alNGaltlgtlDGanvEi 665 (794)
T TIGR02093 605 KLKVVFVPN-YNVSLAELIIPAADLSEQIST------AGKEA--SGTGNMKF--------MLNGALTIGTLDGANVEI 665 (794)
T ss_pred ceeEEEeCC-CChHHHHHhhhhhhhhhhCCC------CCccc--cCcchhHH--------HhcCcceeecccchhHHH
Confidence 455777763 444445567899999777775 45553 33322111 013566676666654443
No 380
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=24.21 E-value=1.2e+02 Score=28.74 Aligned_cols=49 Identities=14% Similarity=0.008 Sum_probs=34.4
Q ss_pred cEEEEEecCCCCCCCCCCCC----C--CCHHHHHHHHHHHhhCCCeEEEecCCChh
Q 003024 591 SRAILFDYDGTVMPQTSINK----A--PSQAVISIINTLCNDARNTVFVVSGRGRD 640 (856)
Q Consensus 591 ~rlI~~DlDGTLl~~~~~~~----~--~s~~~~~aL~~L~~d~g~~V~I~TGR~~~ 640 (856)
.+++.+|+|+|+-|.....+ . .-+....+|..| ++.|++.+++|--...
T Consensus 18 P~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dL-k~~GVtl~~ASRt~ap 72 (144)
T KOG4549|consen 18 PRLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDL-KKLGVTLIHASRTMAP 72 (144)
T ss_pred eEEEEecccccccccccCcccCcceeeeccchhHHHHHH-HhcCcEEEEecCCCCH
Confidence 47899999999998443211 1 235666778887 7789999999855443
No 381
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=23.31 E-value=1.7e+02 Score=29.20 Aligned_cols=42 Identities=19% Similarity=0.123 Sum_probs=29.0
Q ss_pred CCHHHHHHHHHHHhhhc--CCCcceEEEEeCC-chhHHHHHHccc
Q 003024 756 VSKGVVAEKIFTTMAES--GRHADFVLCIGDD-RSDEDMFEIIGN 797 (856)
Q Consensus 756 vsKG~al~~Ll~~l~~~--gi~~d~vlaiGD~-~ND~~Mf~~ag~ 797 (856)
.-|.-+.+.+++++... ...++++++|||- .+|+-|-...|.
T Consensus 114 ~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~ 158 (168)
T PF09419_consen 114 AKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGS 158 (168)
T ss_pred CCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCc
Confidence 34555556666666221 1358999999998 599988888875
No 382
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=22.88 E-value=6.1e+02 Score=26.70 Aligned_cols=65 Identities=14% Similarity=0.146 Sum_probs=43.0
Q ss_pred eEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh-cceeeecc
Q 003024 372 AVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI-AECVVVTA 440 (856)
Q Consensus 372 vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~-ADv~vvtS 440 (856)
.|||+-.+|..+..+-.++..+.+.++-+.++. .++.-.+...|.++.+.+..+..+ ||++|+-|
T Consensus 133 ~VLvMsV~PGf~GQ~fi~~~l~KI~~lr~~~~~----~~~~~~IeVDGGI~~~~i~~~~~aGad~~V~Gs 198 (229)
T PRK09722 133 KITVMTVDPGFAGQPFIPEMLDKIAELKALRER----NGLEYLIEVDGSCNQKTYEKLMEAGADVFIVGT 198 (229)
T ss_pred EEEEEEEcCCCcchhccHHHHHHHHHHHHHHHh----cCCCeEEEEECCCCHHHHHHHHHcCCCEEEECh
Confidence 668888888765544444555555555544443 244446778999998888777654 89988763
No 383
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=22.72 E-value=53 Score=33.20 Aligned_cols=37 Identities=11% Similarity=0.033 Sum_probs=27.6
Q ss_pred CCCHHHHHHHHHHHhhCCCeEEEecCCChhhHHHhhcC
Q 003024 611 APSQAVISIINTLCNDARNTVFVVSGRGRDCLGKWFSP 648 (856)
Q Consensus 611 ~~s~~~~~aL~~L~~d~g~~V~I~TGR~~~~l~~~~~~ 648 (856)
.+.|..++.++. ++..++.|+++||-.-..+..+|.+
T Consensus 73 ~Idp~fKef~e~-ike~di~fiVvSsGm~~fI~~lfe~ 109 (220)
T COG4359 73 KIDPGFKEFVEW-IKEHDIPFIVVSSGMDPFIYPLFEG 109 (220)
T ss_pred ccCccHHHHHHH-HHHcCCCEEEEeCCCchHHHHHHHh
Confidence 455667777777 5777888888888888888777744
No 384
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=21.80 E-value=6.4e+02 Score=26.55 Aligned_cols=66 Identities=17% Similarity=0.193 Sum_probs=42.7
Q ss_pred eEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh-cceeeeccc
Q 003024 372 AVLVQIANPARGRGKDLEEIQAEIHATCKRINETFGRPGYEPVVFIDKPVTLSERAAYYTI-AECVVVTAV 441 (856)
Q Consensus 372 vvLvqi~~p~r~~~~~~~~l~~~~~~lv~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~-ADv~vvtS~ 441 (856)
.+||+-.+|..+...-.+...+.+.++-+.+..+ ++.-.+...|.+..+....+..+ ||++|.-|.
T Consensus 143 ~VLiMtV~PGfgGQ~f~~~~l~KI~~lr~~~~~~----~~~~~IeVDGGI~~~ti~~l~~aGaD~~V~GSa 209 (228)
T PRK08091 143 LIQILTLDPRTGTKAPSDLILDRVIQVENRLGNR----RVEKLISIDGSMTLELASYLKQHQIDWVVSGSA 209 (228)
T ss_pred EEEEEEECCCCCCccccHHHHHHHHHHHHHHHhc----CCCceEEEECCCCHHHHHHHHHCCCCEEEEChh
Confidence 5678777887654433344445555554444332 34446778999999888777654 899888763
No 385
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=21.54 E-value=6.7e+02 Score=28.73 Aligned_cols=102 Identities=18% Similarity=0.137 Sum_probs=63.2
Q ss_pred EEEcCCCCHHHHHHHHHhcceeeeccccccCCCcccceeeeecCCCCCCCCCCCCCCCCceEEecCCcccccc-------
Q 003024 415 VFIDKPVTLSERAAYYTIAECVVVTAVRDGMNLTPYEYIVCRQGVSGSESSSESSAPKKSMLVVSEFIGCSPS------- 487 (856)
Q Consensus 415 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~------- 487 (856)
++....+|+.+ ++..||++|-. -|+|.+ .|++..+. |+|+=-.. .++
T Consensus 286 ~~v~~~~p~~~---~l~~ad~vI~h---GG~gtt-~eaL~~gv-----------------P~vv~P~~--~DQ~~nA~rv 339 (406)
T COG1819 286 VIVADYVPQLE---LLPRADAVIHH---GGAGTT-SEALYAGV-----------------PLVVIPDG--ADQPLNAERV 339 (406)
T ss_pred eEEecCCCHHH---HhhhcCEEEec---CCcchH-HHHHHcCC-----------------CEEEecCC--cchhHHHHHH
Confidence 34456677666 67899998854 577754 57888744 55543222 333
Q ss_pred --cCCc--eeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHH
Q 003024 488 --LSGA--IRVNPWNIEATAEAMHEAIQMNEAEKQLRHEKHYRYVSTHDVAYWARSFFQDM 544 (856)
Q Consensus 488 --l~~a--l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 544 (856)
+.-| +..++++.+.++++++++|+++ .-+.+.++.++....++...=+...+.++
T Consensus 340 e~~G~G~~l~~~~l~~~~l~~av~~vL~~~--~~~~~~~~~~~~~~~~~g~~~~a~~le~~ 398 (406)
T COG1819 340 EELGAGIALPFEELTEERLRAAVNEVLADD--SYRRAAERLAEEFKEEDGPAKAADLLEEF 398 (406)
T ss_pred HHcCCceecCcccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHhhhcccHHHHHHHHHHH
Confidence 2224 4555899999999999999844 22334455666666666554444444443
Done!